Query 008629
Match_columns 559
No_of_seqs 223 out of 1371
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 08:01:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008629.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008629hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 4E-189 1E-193 1516.4 44.3 508 50-559 1-541 (555)
2 1o0s_A NAD-ME, NAD-dependent m 100.0 2E-188 6E-193 1519.2 42.4 512 46-559 33-578 (605)
3 1pj3_A NAD-dependent malic enz 100.0 3E-188 9E-193 1513.7 43.5 509 50-559 3-546 (564)
4 3nv9_A Malic enzyme; rossmann 100.0 2E-117 6E-122 943.8 29.5 371 132-550 58-449 (487)
5 2a9f_A Putative malic enzyme ( 100.0 4E-110 1E-114 878.3 17.1 359 121-530 23-390 (398)
6 1vl6_A Malate oxidoreductase; 100.0 8E-105 3E-109 836.4 20.8 352 121-527 27-388 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 1.3E-85 4.4E-90 702.0 25.5 383 121-555 21-420 (439)
8 3gvp_A Adenosylhomocysteinase 98.8 5.7E-08 1.9E-12 104.0 15.3 127 267-427 181-318 (435)
9 3h9u_A Adenosylhomocysteinase; 98.8 2.2E-08 7.6E-13 107.1 10.6 130 266-429 171-311 (436)
10 1x13_A NAD(P) transhydrogenase 98.0 2E-06 6.7E-11 90.7 2.8 218 166-417 26-295 (401)
11 3n58_A Adenosylhomocysteinase; 97.9 5.9E-05 2E-09 81.3 11.8 128 266-427 207-345 (464)
12 3ond_A Adenosylhomocysteinase; 97.9 3.5E-05 1.2E-09 83.7 10.1 132 266-430 225-366 (488)
13 4dio_A NAD(P) transhydrogenase 97.1 0.00064 2.2E-08 72.2 6.6 110 296-423 187-322 (405)
14 3p2y_A Alanine dehydrogenase/p 96.7 0.0017 5.9E-08 68.4 6.3 100 297-417 182-305 (381)
15 3k92_A NAD-GDH, NAD-specific g 96.7 0.012 4E-07 63.0 12.5 174 225-417 130-329 (424)
16 3d4o_A Dipicolinate synthase s 96.3 0.0094 3.2E-07 59.5 8.8 133 266-427 116-255 (293)
17 1l7d_A Nicotinamide nucleotide 96.1 0.019 6.5E-07 59.7 9.9 218 167-416 20-296 (384)
18 4fcc_A Glutamate dehydrogenase 96.1 0.12 4E-06 55.7 16.0 195 208-417 112-354 (450)
19 3aoe_E Glutamate dehydrogenase 96.0 0.033 1.1E-06 59.4 11.5 174 225-418 127-324 (419)
20 1a4i_A Methylenetetrahydrofola 95.9 0.017 5.7E-07 59.3 8.2 96 277-416 143-239 (301)
21 3l07_A Bifunctional protein fo 95.7 0.025 8.6E-07 57.6 8.5 94 277-414 139-233 (285)
22 3r3j_A Glutamate dehydrogenase 95.7 0.29 1E-05 52.8 17.1 186 225-429 149-368 (456)
23 3jyo_A Quinate/shikimate dehyd 95.6 0.021 7.3E-07 57.4 7.6 88 283-390 111-205 (283)
24 2yfq_A Padgh, NAD-GDH, NAD-spe 95.4 0.086 2.9E-06 56.3 11.5 174 225-417 120-326 (421)
25 3p2o_A Bifunctional protein fo 95.3 0.041 1.4E-06 56.0 8.5 96 278-417 139-236 (285)
26 2bma_A Glutamate dehydrogenase 95.3 0.21 7.2E-06 54.1 14.3 177 225-417 162-372 (470)
27 3tri_A Pyrroline-5-carboxylate 95.2 0.075 2.6E-06 52.7 10.0 121 299-448 3-127 (280)
28 3ngx_A Bifunctional protein fo 95.2 0.041 1.4E-06 55.7 8.0 83 277-399 130-213 (276)
29 1b0a_A Protein (fold bifunctio 95.2 0.036 1.2E-06 56.5 7.5 96 277-416 137-233 (288)
30 1edz_A 5,10-methylenetetrahydr 95.1 0.029 9.9E-07 57.9 6.7 114 280-417 149-278 (320)
31 3aog_A Glutamate dehydrogenase 95.1 0.19 6.5E-06 54.0 13.1 175 225-417 144-344 (440)
32 1gpj_A Glutamyl-tRNA reductase 95.1 0.14 4.7E-06 53.6 11.8 102 296-417 164-269 (404)
33 4a5o_A Bifunctional protein fo 95.0 0.053 1.8E-06 55.2 8.3 97 277-417 139-237 (286)
34 3don_A Shikimate dehydrogenase 95.0 0.027 9.3E-07 56.6 5.9 86 283-390 101-186 (277)
35 3oj0_A Glutr, glutamyl-tRNA re 94.9 0.015 5E-07 51.5 3.3 88 277-390 4-91 (144)
36 1v9l_A Glutamate dehydrogenase 94.8 0.17 5.9E-06 54.0 11.8 175 225-417 119-325 (421)
37 4a26_A Putative C-1-tetrahydro 94.8 0.06 2.1E-06 55.2 7.8 96 275-414 141-239 (300)
38 1v8b_A Adenosylhomocysteinase; 94.6 0.15 5.1E-06 55.3 10.9 124 273-429 234-357 (479)
39 3d64_A Adenosylhomocysteinase; 94.4 0.094 3.2E-06 57.0 8.7 110 277-417 258-367 (494)
40 2tmg_A Protein (glutamate dehy 94.3 0.59 2E-05 49.8 14.5 175 225-417 118-319 (415)
41 4e12_A Diketoreductase; oxidor 94.3 0.072 2.4E-06 52.6 7.0 98 300-419 5-124 (283)
42 2egg_A AROE, shikimate 5-dehyd 94.2 0.044 1.5E-06 55.2 5.2 87 284-390 125-215 (297)
43 2rir_A Dipicolinate synthase, 94.1 0.072 2.5E-06 53.1 6.7 110 290-427 148-257 (300)
44 1bgv_A Glutamate dehydrogenase 94.1 0.63 2.2E-05 50.1 14.1 176 225-417 139-350 (449)
45 3u62_A Shikimate dehydrogenase 94.0 0.073 2.5E-06 52.6 6.4 100 285-415 97-201 (253)
46 2c2x_A Methylenetetrahydrofola 94.0 0.11 3.9E-06 52.7 7.8 98 277-416 136-234 (281)
47 1c1d_A L-phenylalanine dehydro 93.9 0.21 7.1E-06 52.1 9.9 162 225-418 94-266 (355)
48 1leh_A Leucine dehydrogenase; 93.2 0.15 5.2E-06 53.2 7.5 165 221-417 86-264 (364)
49 2o4c_A Erythronate-4-phosphate 93.0 0.59 2E-05 49.1 11.5 188 266-497 80-280 (380)
50 3fbt_A Chorismate mutase and s 92.9 0.15 5.1E-06 51.4 6.6 104 284-417 107-218 (282)
51 2hk9_A Shikimate dehydrogenase 92.8 0.23 7.9E-06 49.0 7.7 84 284-390 114-197 (275)
52 2dpo_A L-gulonate 3-dehydrogen 92.8 0.33 1.1E-05 49.5 9.0 123 299-447 6-151 (319)
53 3u95_A Glycoside hydrolase, fa 92.7 0.17 5.7E-06 54.6 7.0 44 395-441 140-183 (477)
54 3tnl_A Shikimate dehydrogenase 92.6 0.18 6.3E-06 51.6 6.9 50 283-343 138-187 (315)
55 3t4e_A Quinate/shikimate dehyd 92.6 0.17 6E-06 51.7 6.7 90 284-390 133-231 (312)
56 3o8q_A Shikimate 5-dehydrogena 92.6 0.17 5.7E-06 50.9 6.4 50 283-343 110-159 (281)
57 1hyh_A L-hicdh, L-2-hydroxyiso 92.6 0.16 5.4E-06 50.8 6.3 102 300-418 2-126 (309)
58 1mld_A Malate dehydrogenase; o 92.4 0.4 1.4E-05 48.6 9.1 101 301-417 2-120 (314)
59 2ewd_A Lactate dehydrogenase,; 92.4 0.17 5.8E-06 50.9 6.3 100 300-418 5-125 (317)
60 3mw9_A GDH 1, glutamate dehydr 92.3 0.47 1.6E-05 51.7 9.9 175 225-417 140-352 (501)
61 1pzg_A LDH, lactate dehydrogen 92.2 0.22 7.4E-06 50.9 6.8 101 300-418 10-136 (331)
62 3pwz_A Shikimate dehydrogenase 92.1 0.18 6.1E-06 50.4 6.0 100 229-343 43-153 (272)
63 1pjc_A Protein (L-alanine dehy 92.0 0.22 7.4E-06 51.3 6.6 96 297-416 165-269 (361)
64 1gtm_A Glutamate dehydrogenase 92.0 0.6 2E-05 49.7 10.1 112 225-347 118-250 (419)
65 3tum_A Shikimate dehydrogenase 91.9 0.25 8.6E-06 49.4 6.8 49 284-343 110-158 (269)
66 3oet_A Erythronate-4-phosphate 91.8 1.1 3.6E-05 47.3 11.6 120 266-417 83-213 (381)
67 2eez_A Alanine dehydrogenase; 91.8 0.25 8.5E-06 50.9 6.8 97 296-416 163-268 (369)
68 3fef_A Putative glucosidase LP 91.8 0.16 5.6E-06 54.5 5.5 106 297-417 3-149 (450)
69 3dtt_A NADP oxidoreductase; st 91.4 0.39 1.3E-05 46.3 7.3 109 293-417 13-127 (245)
70 2ekl_A D-3-phosphoglycerate de 91.2 1.7 5.8E-05 44.0 12.1 121 266-415 90-233 (313)
71 2d5c_A AROE, shikimate 5-dehyd 91.1 0.31 1.1E-05 47.5 6.3 81 284-390 102-182 (263)
72 3hdj_A Probable ornithine cycl 91.1 0.78 2.7E-05 46.6 9.5 101 298-427 120-227 (313)
73 1x7d_A Ornithine cyclodeaminas 91.0 0.33 1.1E-05 50.1 6.7 114 284-425 116-238 (350)
74 1obb_A Maltase, alpha-glucosid 90.9 0.29 1E-05 53.0 6.5 124 299-440 3-174 (480)
75 2v6b_A L-LDH, L-lactate dehydr 90.9 0.087 3E-06 53.0 2.2 123 301-440 2-139 (304)
76 2g1u_A Hypothetical protein TM 90.9 0.41 1.4E-05 42.6 6.4 102 295-415 15-119 (155)
77 1o6z_A MDH, malate dehydrogena 90.7 0.31 1.1E-05 49.0 6.0 103 301-417 2-122 (303)
78 1zud_1 Adenylyltransferase THI 90.7 0.25 8.6E-06 48.4 5.2 37 296-343 25-61 (251)
79 2gcg_A Glyoxylate reductase/hy 90.6 1.9 6.4E-05 43.8 11.9 140 247-415 80-247 (330)
80 1b8p_A Protein (malate dehydro 90.6 0.35 1.2E-05 49.1 6.4 111 300-417 6-136 (329)
81 3ce6_A Adenosylhomocysteinase; 90.6 1.6 5.4E-05 47.4 11.9 107 291-428 266-373 (494)
82 2i6t_A Ubiquitin-conjugating e 90.5 0.49 1.7E-05 47.9 7.3 101 300-418 15-129 (303)
83 1nyt_A Shikimate 5-dehydrogena 90.2 0.46 1.6E-05 46.7 6.7 49 283-343 103-151 (271)
84 2hjr_A Malate dehydrogenase; m 89.9 0.23 7.9E-06 50.6 4.4 128 300-444 15-160 (328)
85 2dbq_A Glyoxylate reductase; D 89.9 3.3 0.00011 42.1 12.9 121 266-415 89-241 (334)
86 1ldn_A L-lactate dehydrogenase 89.7 0.16 5.5E-06 51.4 3.0 105 300-417 7-126 (316)
87 3h5n_A MCCB protein; ubiquitin 89.7 0.88 3E-05 47.0 8.6 38 295-343 114-151 (353)
88 3rui_A Ubiquitin-like modifier 89.7 0.28 9.7E-06 50.9 4.9 37 296-343 31-67 (340)
89 1t2d_A LDH-P, L-lactate dehydr 89.6 0.32 1.1E-05 49.6 5.1 101 300-418 5-130 (322)
90 1p77_A Shikimate 5-dehydrogena 89.6 0.37 1.3E-05 47.5 5.5 49 283-343 103-151 (272)
91 2hmt_A YUAA protein; RCK, KTN, 89.2 0.27 9.2E-06 41.9 3.6 103 297-417 4-108 (144)
92 1omo_A Alanine dehydrogenase; 89.1 1.1 3.9E-05 45.3 8.8 112 284-425 112-229 (322)
93 1lu9_A Methylene tetrahydromet 89.1 1.6 5.5E-05 42.9 9.7 81 249-343 64-152 (287)
94 2zqz_A L-LDH, L-lactate dehydr 89.0 0.31 1.1E-05 49.8 4.6 106 299-417 9-128 (326)
95 2rcy_A Pyrroline carboxylate r 89.0 2 7E-05 40.9 10.1 92 299-418 4-95 (262)
96 2i99_A MU-crystallin homolog; 88.9 1 3.5E-05 45.3 8.2 113 284-424 122-237 (312)
97 1ez4_A Lactate dehydrogenase; 88.8 0.38 1.3E-05 48.9 5.0 105 300-417 6-124 (318)
98 3d1l_A Putative NADP oxidoredu 88.8 0.33 1.1E-05 46.8 4.4 99 295-417 6-105 (266)
99 1s6y_A 6-phospho-beta-glucosid 88.7 0.25 8.7E-06 52.9 3.8 127 300-440 8-175 (450)
100 1a5z_A L-lactate dehydrogenase 88.6 0.54 1.9E-05 47.4 6.0 100 301-418 2-120 (319)
101 3d0o_A L-LDH 1, L-lactate dehy 88.5 0.47 1.6E-05 48.0 5.5 107 298-417 5-126 (317)
102 1u8x_X Maltose-6'-phosphate gl 88.4 0.32 1.1E-05 52.5 4.3 126 299-440 28-194 (472)
103 2vhw_A Alanine dehydrogenase; 88.3 0.45 1.5E-05 49.3 5.3 96 296-415 165-269 (377)
104 4g2n_A D-isomer specific 2-hyd 88.2 3.7 0.00013 42.4 12.0 192 266-496 116-336 (345)
105 1guz_A Malate dehydrogenase; o 87.9 0.88 3E-05 45.7 7.0 100 301-417 2-121 (310)
106 1y6j_A L-lactate dehydrogenase 87.9 0.54 1.9E-05 47.7 5.4 101 300-417 8-126 (318)
107 3h8v_A Ubiquitin-like modifier 87.7 0.56 1.9E-05 47.6 5.4 38 295-343 32-69 (292)
108 3vku_A L-LDH, L-lactate dehydr 87.7 0.53 1.8E-05 48.4 5.3 106 299-417 9-128 (326)
109 2zyd_A 6-phosphogluconate dehy 87.6 0.98 3.4E-05 48.5 7.5 101 297-417 13-116 (480)
110 3ba1_A HPPR, hydroxyphenylpyru 87.6 2.7 9.4E-05 43.0 10.5 92 294-417 159-254 (333)
111 3kkj_A Amine oxidase, flavin-c 87.5 0.49 1.7E-05 41.7 4.3 31 301-343 4-34 (336)
112 3phh_A Shikimate dehydrogenase 87.4 1.4 4.8E-05 44.1 8.0 100 284-416 107-212 (269)
113 1wwk_A Phosphoglycerate dehydr 87.2 3.7 0.00013 41.3 11.2 109 278-415 103-233 (307)
114 4gsl_A Ubiquitin-like modifier 87.1 0.52 1.8E-05 52.6 5.1 37 296-343 323-359 (615)
115 1xdw_A NAD+-dependent (R)-2-hy 87.0 4.4 0.00015 41.2 11.6 137 247-415 73-235 (331)
116 3jtm_A Formate dehydrogenase, 86.8 4 0.00014 42.3 11.3 175 265-470 107-309 (351)
117 1smk_A Malate dehydrogenase, g 86.6 0.98 3.3E-05 45.9 6.5 104 300-417 9-128 (326)
118 1z82_A Glycerol-3-phosphate de 86.4 0.67 2.3E-05 46.5 5.1 98 299-419 14-116 (335)
119 1up7_A 6-phospho-beta-glucosid 86.3 0.96 3.3E-05 47.9 6.4 124 300-440 3-164 (417)
120 1hyu_A AHPF, alkyl hydroperoxi 86.2 0.8 2.7E-05 49.0 5.9 104 225-343 130-244 (521)
121 1lld_A L-lactate dehydrogenase 86.2 0.49 1.7E-05 46.9 4.0 103 299-418 7-128 (319)
122 1qp8_A Formate dehydrogenase; 86.2 7.1 0.00024 39.3 12.5 117 266-415 71-211 (303)
123 4huj_A Uncharacterized protein 86.2 0.72 2.5E-05 43.7 5.0 93 300-418 24-117 (220)
124 4e21_A 6-phosphogluconate dehy 86.0 2.2 7.5E-05 44.1 8.8 95 297-416 20-117 (358)
125 2j6i_A Formate dehydrogenase; 85.9 3 0.0001 43.2 9.8 144 247-416 88-259 (364)
126 1oju_A MDH, malate dehydrogena 85.8 0.59 2E-05 47.2 4.4 104 301-417 2-121 (294)
127 1nvt_A Shikimate 5'-dehydrogen 85.8 0.67 2.3E-05 45.9 4.7 49 282-343 111-159 (287)
128 3vh1_A Ubiquitin-like modifier 85.8 0.62 2.1E-05 51.8 4.8 38 295-343 323-360 (598)
129 2cuk_A Glycerate dehydrogenase 85.8 5.4 0.00018 40.3 11.4 117 266-416 87-231 (311)
130 1sc6_A PGDH, D-3-phosphoglycer 85.8 9.3 0.00032 40.2 13.6 191 265-496 90-311 (404)
131 1npy_A Hypothetical shikimate 85.7 1.1 3.6E-05 44.7 6.1 48 284-343 105-152 (271)
132 1jw9_B Molybdopterin biosynthe 85.6 0.55 1.9E-05 45.9 3.9 37 296-343 28-64 (249)
133 3gt0_A Pyrroline-5-carboxylate 85.6 1.5 5E-05 42.0 6.9 98 300-418 3-101 (247)
134 1ur5_A Malate dehydrogenase; o 85.5 1.1 3.7E-05 45.1 6.1 104 300-417 3-122 (309)
135 3i83_A 2-dehydropantoate 2-red 85.5 1.2 4.1E-05 44.5 6.4 98 300-418 3-109 (320)
136 2d0i_A Dehydrogenase; structur 85.2 4.7 0.00016 41.1 10.7 91 295-415 142-236 (333)
137 2xxj_A L-LDH, L-lactate dehydr 85.2 0.4 1.4E-05 48.6 2.7 105 300-417 1-119 (310)
138 3gvi_A Malate dehydrogenase; N 85.1 1.1 3.8E-05 45.8 6.1 106 297-417 5-127 (324)
139 2p4q_A 6-phosphogluconate dehy 85.0 1.4 4.7E-05 47.6 7.0 98 300-417 11-112 (497)
140 4dgs_A Dehydrogenase; structur 84.8 5.2 0.00018 41.2 10.9 131 266-428 115-272 (340)
141 3ado_A Lambda-crystallin; L-gu 84.6 1.3 4.3E-05 45.5 6.2 33 299-343 6-38 (319)
142 1txg_A Glycerol-3-phosphate de 84.6 2.4 8.2E-05 41.8 8.1 94 301-417 2-107 (335)
143 4hy3_A Phosphoglycerate oxidor 84.4 3.3 0.00011 43.2 9.3 161 294-496 171-339 (365)
144 2yq5_A D-isomer specific 2-hyd 84.3 11 0.00036 39.0 13.0 121 266-417 92-239 (343)
145 3p7m_A Malate dehydrogenase; p 83.6 0.65 2.2E-05 47.4 3.5 106 298-417 4-125 (321)
146 2raf_A Putative dinucleotide-b 83.4 2.6 8.7E-05 39.7 7.3 80 295-418 15-94 (209)
147 2d4a_B Malate dehydrogenase; a 83.4 0.99 3.4E-05 45.6 4.7 99 301-417 1-119 (308)
148 3k5p_A D-3-phosphoglycerate de 83.4 39 0.0013 35.8 17.1 193 265-496 101-322 (416)
149 3nep_X Malate dehydrogenase; h 83.3 0.69 2.4E-05 47.2 3.6 104 301-417 2-121 (314)
150 1j4a_A D-LDH, D-lactate dehydr 83.1 12 0.0004 38.1 12.7 123 265-417 91-238 (333)
151 1ks9_A KPA reductase;, 2-dehyd 83.1 1.9 6.4E-05 41.4 6.4 95 301-417 2-100 (291)
152 1f0y_A HCDH, L-3-hydroxyacyl-C 83.0 1.1 3.8E-05 44.2 4.9 32 300-343 16-47 (302)
153 1hdo_A Biliverdin IX beta redu 83.0 3.2 0.00011 37.1 7.5 96 299-412 3-109 (206)
154 3k6j_A Protein F01G10.3, confi 83.0 1.5 5.2E-05 47.1 6.3 32 300-343 55-86 (460)
155 3pp8_A Glyoxylate/hydroxypyruv 83.0 2.5 8.6E-05 43.0 7.6 210 247-496 63-301 (315)
156 3tl2_A Malate dehydrogenase; c 83.0 0.86 2.9E-05 46.4 4.1 107 297-417 6-130 (315)
157 2w2k_A D-mandelate dehydrogena 82.9 8.9 0.0003 39.2 11.7 97 294-416 158-258 (348)
158 3hg7_A D-isomer specific 2-hyd 82.8 2.8 9.5E-05 43.0 7.8 187 267-497 89-303 (324)
159 3evt_A Phosphoglycerate dehydr 82.7 5.5 0.00019 40.7 10.0 189 266-496 83-301 (324)
160 2pi1_A D-lactate dehydrogenase 82.7 7 0.00024 40.0 10.8 128 278-437 101-251 (334)
161 3lk7_A UDP-N-acetylmuramoylala 82.4 1.4 4.8E-05 46.4 5.6 119 296-453 6-125 (451)
162 3pqe_A L-LDH, L-lactate dehydr 82.0 0.78 2.7E-05 47.0 3.4 102 299-417 5-125 (326)
163 1x0v_A GPD-C, GPDH-C, glycerol 81.9 3.2 0.00011 41.5 7.8 111 299-418 8-128 (354)
164 1dxy_A D-2-hydroxyisocaproate 81.9 12 0.00041 38.1 12.2 121 266-417 90-236 (333)
165 1hye_A L-lactate/malate dehydr 81.6 1.8 6.2E-05 43.5 5.9 102 301-417 2-125 (313)
166 1y8q_A Ubiquitin-like 1 activa 81.6 1.1 3.7E-05 46.2 4.3 37 296-343 33-69 (346)
167 4fgw_A Glycerol-3-phosphate de 81.4 1.6 5.5E-05 46.1 5.6 22 300-321 35-56 (391)
168 1y7t_A Malate dehydrogenase; N 81.1 1 3.5E-05 45.2 3.9 110 300-417 5-133 (327)
169 2izz_A Pyrroline-5-carboxylate 81.1 3 0.0001 41.8 7.2 100 299-418 22-122 (322)
170 3gvx_A Glycerate dehydrogenase 81.0 9.3 0.00032 38.4 10.8 176 278-497 85-282 (290)
171 3b1f_A Putative prephenate deh 80.9 2.2 7.5E-05 41.5 6.0 96 299-416 6-103 (290)
172 1pgj_A 6PGDH, 6-PGDH, 6-phosph 80.7 1.6 5.6E-05 46.6 5.4 97 301-417 3-106 (478)
173 2nac_A NAD-dependent formate d 80.7 6.6 0.00022 41.3 9.9 165 294-495 186-356 (393)
174 3k96_A Glycerol-3-phosphate de 80.3 2.9 0.0001 43.0 7.0 102 299-418 29-137 (356)
175 4ina_A Saccharopine dehydrogen 80.0 1.9 6.4E-05 45.0 5.5 96 300-415 2-108 (405)
176 2qrj_A Saccharopine dehydrogen 79.9 6.9 0.00024 41.4 9.8 71 299-401 214-289 (394)
177 4gwg_A 6-phosphogluconate dehy 79.5 3.4 0.00012 44.7 7.4 99 299-417 4-106 (484)
178 2iz1_A 6-phosphogluconate dehy 79.5 3.5 0.00012 43.9 7.5 99 299-417 5-106 (474)
179 3gg9_A D-3-phosphoglycerate de 79.4 7.1 0.00024 40.3 9.6 162 294-496 155-325 (352)
180 3c85_A Putative glutathione-re 79.3 1.1 3.9E-05 40.5 3.2 37 296-343 36-72 (183)
181 4dll_A 2-hydroxy-3-oxopropiona 79.2 1.6 5.4E-05 43.7 4.5 35 297-343 29-63 (320)
182 2g76_A 3-PGDH, D-3-phosphoglyc 79.1 10 0.00035 38.8 10.5 119 267-415 112-256 (335)
183 2pgd_A 6-phosphogluconate dehy 78.9 2.3 8E-05 45.4 5.9 98 300-417 3-104 (482)
184 2vns_A Metalloreductase steap3 78.9 1.5 5.1E-05 41.4 4.0 94 297-418 26-119 (215)
185 2h78_A Hibadh, 3-hydroxyisobut 78.6 1.8 6.3E-05 42.4 4.7 32 300-343 4-35 (302)
186 3vrd_B FCCB subunit, flavocyto 78.6 2.2 7.7E-05 43.0 5.4 35 299-343 2-36 (401)
187 2uyy_A N-PAC protein; long-cha 78.6 2.5 8.6E-05 41.7 5.7 32 300-343 31-62 (316)
188 1jay_A Coenzyme F420H2:NADP+ o 78.3 0.89 3.1E-05 42.0 2.2 94 301-418 2-101 (212)
189 3c24_A Putative oxidoreductase 78.3 3 0.0001 40.7 6.1 91 300-417 12-104 (286)
190 1yj8_A Glycerol-3-phosphate de 78.3 2.8 9.5E-05 42.7 6.1 110 300-418 22-145 (375)
191 1gdh_A D-glycerate dehydrogena 78.1 11 0.00037 38.1 10.4 122 266-415 89-239 (320)
192 3l6d_A Putative oxidoreductase 78.0 1.6 5.4E-05 43.5 4.1 36 296-343 6-41 (306)
193 3abi_A Putative uncharacterize 77.6 1.4 4.9E-05 44.8 3.7 88 301-415 18-109 (365)
194 1lss_A TRK system potassium up 77.6 2.2 7.5E-05 36.0 4.3 33 299-343 4-36 (140)
195 3doj_A AT3G25530, dehydrogenas 77.4 2.1 7.3E-05 42.6 4.8 36 296-343 18-53 (310)
196 3pdu_A 3-hydroxyisobutyrate de 77.2 2 6.8E-05 42.0 4.4 32 300-343 2-33 (287)
197 3pef_A 6-phosphogluconate dehy 76.8 1.7 5.9E-05 42.4 3.9 32 300-343 2-33 (287)
198 4e5n_A Thermostable phosphite 76.4 8.5 0.00029 39.2 9.0 195 266-496 89-317 (330)
199 3gpi_A NAD-dependent epimerase 76.3 2.2 7.5E-05 40.9 4.4 96 298-414 2-109 (286)
200 1mx3_A CTBP1, C-terminal bindi 76.0 12 0.00041 38.5 10.1 161 295-495 164-333 (347)
201 3qha_A Putative oxidoreductase 75.8 2.5 8.5E-05 41.8 4.7 33 299-343 15-47 (296)
202 1yb4_A Tartronic semialdehyde 75.6 3.8 0.00013 39.6 6.0 30 300-341 4-33 (295)
203 4egb_A DTDP-glucose 4,6-dehydr 75.4 8.6 0.00029 37.6 8.5 106 297-414 22-149 (346)
204 1tt5_B Ubiquitin-activating en 75.3 1.8 6.2E-05 46.1 3.8 38 295-343 36-73 (434)
205 3e8x_A Putative NAD-dependent 75.3 5.2 0.00018 37.2 6.6 100 295-414 17-131 (236)
206 2x0j_A Malate dehydrogenase; o 75.1 3.5 0.00012 41.7 5.7 104 301-417 2-121 (294)
207 3cky_A 2-hydroxymethyl glutara 75.1 2.4 8.3E-05 41.3 4.4 32 300-343 5-36 (301)
208 3fwz_A Inner membrane protein 75.1 1.3 4.6E-05 38.6 2.3 32 300-343 8-39 (140)
209 4hb9_A Similarities with proba 74.9 2.5 8.6E-05 41.9 4.5 32 300-343 2-33 (412)
210 4ezb_A Uncharacterized conserv 74.5 3.4 0.00012 41.4 5.4 33 300-343 25-57 (317)
211 3qsg_A NAD-binding phosphogluc 73.9 12 0.00041 37.2 9.2 34 299-343 24-57 (312)
212 4aj2_A L-lactate dehydrogenase 73.9 1.5 5.3E-05 45.0 2.8 108 296-417 16-139 (331)
213 3d1c_A Flavin-containing putat 73.6 3 0.0001 41.0 4.7 35 299-344 4-38 (369)
214 2z2v_A Hypothetical protein PH 73.5 2.1 7.3E-05 44.1 3.7 120 298-446 15-137 (365)
215 3ggo_A Prephenate dehydrogenas 73.5 7.5 0.00026 39.0 7.7 93 300-414 34-128 (314)
216 1y8q_B Anthracycline-, ubiquit 72.9 2.2 7.5E-05 47.8 3.8 37 296-343 14-50 (640)
217 3i6i_A Putative leucoanthocyan 72.2 1.6 5.6E-05 43.2 2.4 101 296-411 7-117 (346)
218 3ip1_A Alcohol dehydrogenase, 72.1 14 0.00048 37.9 9.5 46 286-342 200-246 (404)
219 5mdh_A Malate dehydrogenase; o 72.1 1.8 6.3E-05 44.3 2.8 110 300-417 4-132 (333)
220 4a9w_A Monooxygenase; baeyer-v 71.9 3 0.0001 40.3 4.1 34 299-344 3-36 (357)
221 3ldh_A Lactate dehydrogenase; 71.7 1.7 5.9E-05 44.8 2.5 106 298-417 20-141 (330)
222 3fi9_A Malate dehydrogenase; s 71.7 2.2 7.4E-05 44.1 3.2 107 297-417 6-129 (343)
223 2ph5_A Homospermidine synthase 71.6 10 0.00034 41.2 8.5 99 298-415 12-115 (480)
224 3r6d_A NAD-dependent epimerase 71.1 3.5 0.00012 38.0 4.2 94 300-412 6-106 (221)
225 3fbs_A Oxidoreductase; structu 70.6 3.8 0.00013 38.7 4.5 32 300-343 3-34 (297)
226 1vpd_A Tartronate semialdehyde 70.5 3 0.0001 40.5 3.8 32 300-343 6-37 (299)
227 2q1w_A Putative nucleotide sug 70.1 12 0.00043 36.6 8.2 104 296-414 18-137 (333)
228 3pdi_B Nitrogenase MOFE cofact 69.9 2.7 9.1E-05 44.9 3.5 178 159-388 177-384 (458)
229 3dhn_A NAD-dependent epimerase 69.8 5.9 0.0002 36.3 5.5 95 300-412 5-110 (227)
230 3s2u_A UDP-N-acetylglucosamine 69.5 6.4 0.00022 39.8 6.1 41 371-415 84-124 (365)
231 2x5o_A UDP-N-acetylmuramoylala 69.4 20 0.00068 37.4 10.0 114 297-452 3-116 (439)
232 3f8d_A Thioredoxin reductase ( 69.0 4.3 0.00015 38.7 4.5 33 299-343 15-47 (323)
233 1bg6_A N-(1-D-carboxylethyl)-L 69.0 4.7 0.00016 40.0 5.0 93 300-415 5-110 (359)
234 3o38_A Short chain dehydrogena 68.9 4.8 0.00017 38.3 4.8 36 296-343 19-56 (266)
235 3lzw_A Ferredoxin--NADP reduct 68.8 4.4 0.00015 38.9 4.5 33 299-343 7-39 (332)
236 3alj_A 2-methyl-3-hydroxypyrid 68.8 4.4 0.00015 40.6 4.7 37 296-344 8-44 (379)
237 2pzm_A Putative nucleotide sug 68.7 9.1 0.00031 37.5 6.9 103 295-414 16-136 (330)
238 3oz2_A Digeranylgeranylglycero 68.2 4.2 0.00014 39.8 4.3 31 301-343 6-36 (397)
239 2zbw_A Thioredoxin reductase; 68.2 4.4 0.00015 39.3 4.5 34 299-344 5-38 (335)
240 2nvu_B Maltose binding protein 68.0 3.7 0.00013 46.4 4.3 35 298-343 410-444 (805)
241 3fg2_P Putative rubredoxin red 68.0 4.5 0.00016 41.2 4.7 36 300-345 2-37 (404)
242 3hyw_A Sulfide-quinone reducta 67.7 3.6 0.00012 42.5 3.9 34 300-343 3-36 (430)
243 1i36_A Conserved hypothetical 67.6 8.5 0.00029 36.7 6.3 20 301-320 2-21 (264)
244 2bka_A CC3, TAT-interacting pr 67.5 14 0.00047 34.1 7.6 102 297-414 16-132 (242)
245 4id9_A Short-chain dehydrogena 67.4 12 0.00041 36.6 7.5 97 295-414 15-126 (347)
246 3itj_A Thioredoxin reductase 1 67.4 4 0.00014 39.3 3.9 33 299-343 22-54 (338)
247 3ic5_A Putative saccharopine d 66.5 7.8 0.00027 31.5 5.0 84 299-404 5-92 (118)
248 4b4u_A Bifunctional protein fo 66.3 15 0.00053 37.5 8.1 85 277-399 157-242 (303)
249 3m2p_A UDP-N-acetylglucosamine 66.2 16 0.00055 35.2 8.0 93 300-414 3-109 (311)
250 2yjz_A Metalloreductase steap4 69.4 1.2 4.3E-05 41.9 0.0 92 297-417 17-108 (201)
251 2z1m_A GDP-D-mannose dehydrata 65.8 11 0.00036 36.6 6.6 101 298-414 2-127 (345)
252 2q7v_A Thioredoxin reductase; 65.7 4.8 0.00017 39.0 4.2 33 299-343 8-40 (325)
253 3hhp_A Malate dehydrogenase; M 65.5 6.8 0.00023 39.8 5.4 103 301-417 2-121 (312)
254 2pv7_A T-protein [includes: ch 65.3 15 0.00053 36.1 7.8 32 300-343 22-54 (298)
255 3lxd_A FAD-dependent pyridine 65.2 5.3 0.00018 40.8 4.6 38 298-345 8-45 (415)
256 3kb6_A D-lactate dehydrogenase 64.9 50 0.0017 33.6 11.7 111 294-438 136-252 (334)
257 3klj_A NAD(FAD)-dependent dehy 64.8 5.7 0.0002 40.7 4.7 36 299-346 9-44 (385)
258 3slg_A PBGP3 protein; structur 64.7 23 0.00079 34.9 9.0 101 296-414 21-141 (372)
259 2ywl_A Thioredoxin reductase r 64.6 6.3 0.00022 35.0 4.4 32 300-343 2-33 (180)
260 1ygy_A PGDH, D-3-phosphoglycer 64.5 23 0.00078 38.3 9.6 120 266-414 88-232 (529)
261 3r9u_A Thioredoxin reductase; 64.2 6.1 0.00021 37.6 4.5 33 299-343 4-37 (315)
262 1tt5_A APPBP1, amyloid protein 64.2 3.3 0.00011 45.3 2.9 38 295-343 28-65 (531)
263 2vou_A 2,6-dihydroxypyridine h 64.1 6.7 0.00023 39.6 5.0 34 298-343 4-37 (397)
264 3h8l_A NADH oxidase; membrane 63.9 5.4 0.00018 40.5 4.3 36 300-344 2-37 (409)
265 2x3n_A Probable FAD-dependent 63.9 5.8 0.0002 39.9 4.5 34 299-344 6-39 (399)
266 2xdo_A TETX2 protein; tetracyc 63.8 5.7 0.00019 40.2 4.4 36 297-344 24-59 (398)
267 3ab1_A Ferredoxin--NADP reduct 63.8 6.3 0.00022 38.9 4.7 34 299-344 14-47 (360)
268 3nix_A Flavoprotein/dehydrogen 63.7 7.7 0.00026 39.0 5.3 34 299-344 5-38 (421)
269 3cgv_A Geranylgeranyl reductas 63.7 5.3 0.00018 39.6 4.1 34 299-344 4-37 (397)
270 3cty_A Thioredoxin reductase; 63.6 6.1 0.00021 38.2 4.4 33 299-343 16-48 (319)
271 3rp8_A Flavoprotein monooxygen 63.5 6.2 0.00021 39.8 4.6 36 297-344 21-56 (407)
272 2jae_A L-amino acid oxidase; o 63.5 5.5 0.00019 41.3 4.3 42 292-345 4-45 (489)
273 3dme_A Conserved exported prot 63.4 6.6 0.00023 38.1 4.7 33 299-343 4-36 (369)
274 2cvz_A Dehydrogenase, 3-hydrox 63.4 5 0.00017 38.6 3.8 30 301-343 3-32 (289)
275 1ryi_A Glycine oxidase; flavop 63.4 6.4 0.00022 38.9 4.6 35 299-345 17-51 (382)
276 3llv_A Exopolyphosphatase-rela 63.2 6.7 0.00023 33.6 4.2 34 298-343 5-38 (141)
277 2dq4_A L-threonine 3-dehydroge 63.0 9 0.00031 38.2 5.7 86 282-388 149-240 (343)
278 3e48_A Putative nucleoside-dip 62.6 13 0.00043 35.4 6.4 97 301-414 2-106 (289)
279 3c96_A Flavin-containing monoo 62.6 6.8 0.00023 39.7 4.8 35 299-344 4-38 (410)
280 3axb_A Putative oxidoreductase 62.5 6.2 0.00021 40.4 4.4 38 294-342 18-55 (448)
281 3ehe_A UDP-glucose 4-epimerase 62.5 23 0.00078 34.1 8.3 95 301-414 3-114 (313)
282 1yvv_A Amine oxidase, flavin-c 62.4 6.2 0.00021 38.2 4.2 33 300-344 3-35 (336)
283 4b8w_A GDP-L-fucose synthase; 62.1 12 0.0004 35.4 6.1 93 296-414 3-113 (319)
284 2ahr_A Putative pyrroline carb 61.7 5.3 0.00018 38.1 3.5 90 300-417 4-93 (259)
285 4eqs_A Coenzyme A disulfide re 61.7 6.6 0.00022 40.9 4.5 34 301-344 2-35 (437)
286 1trb_A Thioredoxin reductase; 61.6 5.1 0.00017 38.5 3.4 34 298-343 4-37 (320)
287 4ej6_A Putative zinc-binding d 61.5 21 0.00072 36.2 8.2 56 275-342 160-215 (370)
288 3ef6_A Toluene 1,2-dioxygenase 61.5 7.1 0.00024 40.0 4.7 37 300-346 3-39 (410)
289 1y56_B Sarcosine oxidase; dehy 61.4 6.8 0.00023 38.8 4.4 34 299-344 5-38 (382)
290 2q0l_A TRXR, thioredoxin reduc 61.3 7.3 0.00025 37.3 4.5 33 300-343 2-34 (311)
291 2vdc_G Glutamate synthase [NAD 61.1 7.8 0.00027 40.9 5.1 34 298-343 121-154 (456)
292 3ec7_A Putative dehydrogenase; 61.1 3.9 0.00013 41.5 2.6 97 296-411 20-116 (357)
293 2gf3_A MSOX, monomeric sarcosi 61.0 7.3 0.00025 38.5 4.5 35 300-346 4-38 (389)
294 2gag_B Heterotetrameric sarcos 60.9 8.5 0.00029 38.3 5.0 36 299-344 21-56 (405)
295 4gbj_A 6-phosphogluconate dehy 60.9 14 0.00046 36.9 6.5 31 300-342 6-36 (297)
296 1id1_A Putative potassium chan 60.7 8.6 0.0003 33.7 4.5 34 298-343 2-35 (153)
297 3uox_A Otemo; baeyer-villiger 60.5 7.9 0.00027 41.8 5.0 35 298-344 8-42 (545)
298 1n2s_A DTDP-4-, DTDP-glucose o 60.5 8.9 0.0003 36.6 4.9 86 301-414 2-104 (299)
299 2d8a_A PH0655, probable L-thre 60.3 8.8 0.0003 38.3 5.0 48 282-342 153-200 (348)
300 3k7m_X 6-hydroxy-L-nicotine ox 60.1 7.7 0.00026 39.2 4.6 32 301-344 3-34 (431)
301 1vdc_A NTR, NADPH dependent th 60.1 6.6 0.00023 38.0 4.0 33 298-342 7-39 (333)
302 3l4b_C TRKA K+ channel protien 60.1 5.7 0.0002 37.0 3.4 95 301-415 2-100 (218)
303 3cmm_A Ubiquitin-activating en 59.8 6.9 0.00023 46.1 4.7 38 295-343 23-60 (1015)
304 3vtz_A Glucose 1-dehydrogenase 59.8 28 0.00097 33.4 8.4 79 294-390 9-92 (269)
305 3iwa_A FAD-dependent pyridine 59.7 7.3 0.00025 40.5 4.5 37 299-345 3-39 (472)
306 1k0i_A P-hydroxybenzoate hydro 59.5 8.6 0.00029 38.4 4.8 33 300-344 3-35 (394)
307 3qvo_A NMRA family protein; st 59.3 14 0.00049 34.4 6.0 101 297-414 21-125 (236)
308 2gqw_A Ferredoxin reductase; f 59.0 9.5 0.00033 39.1 5.1 38 299-346 7-44 (408)
309 2xve_A Flavin-containing monoo 58.8 7.9 0.00027 40.6 4.5 38 300-343 3-40 (464)
310 1zk7_A HGII, reductase, mercur 58.7 8.4 0.00029 40.0 4.7 33 299-343 4-36 (467)
311 2c20_A UDP-glucose 4-epimerase 58.7 17 0.00059 35.1 6.7 99 300-414 2-118 (330)
312 1e6u_A GDP-fucose synthetase; 58.7 14 0.00048 35.6 6.0 87 299-414 3-107 (321)
313 4a7p_A UDP-glucose dehydrogena 58.5 28 0.00095 37.0 8.8 33 299-343 8-40 (446)
314 3nrc_A Enoyl-[acyl-carrier-pro 58.3 13 0.00044 35.8 5.7 79 296-391 23-115 (280)
315 2uzz_A N-methyl-L-tryptophan o 58.1 7.6 0.00026 38.2 4.1 35 300-346 3-37 (372)
316 3dje_A Fructosyl amine: oxygen 57.8 8.7 0.0003 39.1 4.6 37 299-346 6-42 (438)
317 2oln_A NIKD protein; flavoprot 57.7 9.1 0.00031 38.3 4.6 35 300-346 5-39 (397)
318 1c0p_A D-amino acid oxidase; a 57.4 10 0.00035 37.5 4.9 34 299-344 6-39 (363)
319 4ap3_A Steroid monooxygenase; 57.4 8.4 0.00029 41.6 4.6 35 298-344 20-54 (549)
320 1pqw_A Polyketide synthase; ro 57.2 22 0.00077 32.0 6.8 50 282-343 22-72 (198)
321 3i3l_A Alkylhalidase CMLS; fla 57.2 12 0.00041 41.0 5.8 37 297-345 21-57 (591)
322 3s5w_A L-ornithine 5-monooxyge 57.2 7.1 0.00024 40.1 3.8 39 299-345 30-69 (463)
323 2gv8_A Monooxygenase; FMO, FAD 57.1 8.7 0.0003 39.7 4.5 36 298-343 5-40 (447)
324 2nu8_A Succinyl-COA ligase [AD 57.0 24 0.00083 35.1 7.6 86 299-410 7-93 (288)
325 1dxl_A Dihydrolipoamide dehydr 56.9 10 0.00035 39.2 5.0 33 299-343 6-38 (470)
326 2c5a_A GDP-mannose-3', 5'-epim 56.7 37 0.0013 33.9 9.0 98 299-414 29-145 (379)
327 3dfz_A SIRC, precorrin-2 dehyd 56.5 8.4 0.00029 37.5 4.0 36 296-343 28-63 (223)
328 2eq6_A Pyruvate dehydrogenase 56.4 8.4 0.00029 40.2 4.2 35 298-344 5-39 (464)
329 3enk_A UDP-glucose 4-epimerase 56.3 26 0.00089 33.9 7.6 97 299-414 5-129 (341)
330 3sx6_A Sulfide-quinone reducta 56.3 10 0.00035 39.1 4.8 36 300-344 5-40 (437)
331 2q1s_A Putative nucleotide sug 56.3 18 0.0006 36.2 6.5 103 296-414 29-151 (377)
332 1pl8_A Human sorbitol dehydrog 56.2 18 0.00061 36.3 6.5 49 282-342 156-204 (356)
333 1uzm_A 3-oxoacyl-[acyl-carrier 55.8 24 0.00082 33.3 7.0 78 294-390 10-92 (247)
334 2cul_A Glucose-inhibited divis 55.8 10 0.00035 35.6 4.3 33 299-343 3-35 (232)
335 2dkn_A 3-alpha-hydroxysteroid 55.7 14 0.00047 34.1 5.2 68 301-390 3-73 (255)
336 2x4g_A Nucleoside-diphosphate- 55.7 23 0.0008 34.2 7.1 97 300-414 14-126 (342)
337 3gg2_A Sugar dehydrogenase, UD 55.6 9.4 0.00032 40.5 4.5 32 300-343 3-34 (450)
338 2r9z_A Glutathione amide reduc 55.6 9.7 0.00033 39.8 4.6 33 299-343 4-36 (463)
339 3h28_A Sulfide-quinone reducta 55.4 10 0.00034 39.0 4.6 35 300-344 3-37 (430)
340 2o7s_A DHQ-SDH PR, bifunctiona 55.1 14 0.00049 39.7 5.9 36 296-343 361-396 (523)
341 3urh_A Dihydrolipoyl dehydroge 55.1 9.5 0.00033 39.9 4.4 34 299-344 25-58 (491)
342 3grf_A Ornithine carbamoyltran 55.1 38 0.0013 34.8 8.8 131 237-385 96-240 (328)
343 1yqd_A Sinapyl alcohol dehydro 55.0 25 0.00085 35.5 7.4 49 282-342 171-219 (366)
344 2yy7_A L-threonine dehydrogena 54.8 11 0.00039 35.9 4.6 98 300-413 3-117 (312)
345 3ew7_A LMO0794 protein; Q8Y8U8 54.7 40 0.0014 30.2 8.1 91 301-414 2-103 (221)
346 2qae_A Lipoamide, dihydrolipoy 54.5 11 0.00036 39.3 4.6 33 299-343 2-34 (468)
347 2hqm_A GR, grase, glutathione 54.5 9.6 0.00033 39.9 4.3 35 298-344 10-44 (479)
348 1fl2_A Alkyl hydroperoxide red 54.5 9.8 0.00033 36.4 4.1 32 300-343 2-33 (310)
349 2zcu_A Uncharacterized oxidore 54.4 9 0.00031 36.2 3.8 98 301-414 1-104 (286)
350 2a87_A TRXR, TR, thioredoxin r 54.3 8.7 0.0003 37.5 3.8 34 298-343 13-46 (335)
351 4gcm_A TRXR, thioredoxin reduc 54.2 10 0.00035 36.5 4.2 32 300-343 7-38 (312)
352 2wpf_A Trypanothione reductase 54.1 13 0.00046 39.2 5.4 32 299-341 7-38 (495)
353 2a8x_A Dihydrolipoyl dehydroge 54.1 9.9 0.00034 39.4 4.3 33 299-343 3-35 (464)
354 3v76_A Flavoprotein; structura 54.0 9.9 0.00034 39.6 4.3 35 299-345 27-61 (417)
355 3ek2_A Enoyl-(acyl-carrier-pro 53.9 11 0.00037 35.6 4.2 80 295-390 10-103 (271)
356 3dqp_A Oxidoreductase YLBE; al 53.9 28 0.00096 31.7 7.0 94 301-414 2-106 (219)
357 1w4x_A Phenylacetone monooxyge 53.8 12 0.0004 40.0 5.0 35 298-344 15-49 (542)
358 3kd9_A Coenzyme A disulfide re 53.7 15 0.00051 37.9 5.6 36 299-344 3-38 (449)
359 3m6i_A L-arabinitol 4-dehydrog 53.7 15 0.00053 36.7 5.6 57 274-342 156-212 (363)
360 2p5y_A UDP-glucose 4-epimerase 53.6 20 0.00067 34.5 6.1 98 301-414 2-117 (311)
361 3ka7_A Oxidoreductase; structu 53.5 12 0.0004 37.7 4.6 33 301-345 2-34 (425)
362 4g6h_A Rotenone-insensitive NA 53.4 5.6 0.00019 42.5 2.3 32 300-343 43-74 (502)
363 2qcu_A Aerobic glycerol-3-phos 53.3 11 0.00037 39.9 4.5 34 299-344 3-36 (501)
364 3nrn_A Uncharacterized protein 53.3 12 0.00041 37.9 4.7 33 301-345 2-34 (421)
365 2e4g_A Tryptophan halogenase; 53.2 11 0.00038 40.3 4.7 38 299-345 25-62 (550)
366 4a2c_A Galactitol-1-phosphate 53.2 33 0.0011 33.8 7.8 48 283-342 146-193 (346)
367 4gqa_A NAD binding oxidoreduct 53.2 7.9 0.00027 39.7 3.4 106 287-403 13-119 (412)
368 1rsg_A FMS1 protein; FAD bindi 53.0 4.1 0.00014 43.0 1.2 25 297-321 6-30 (516)
369 3k30_A Histamine dehydrogenase 53.0 13 0.00045 41.0 5.3 34 299-344 391-424 (690)
370 2qa2_A CABE, polyketide oxygen 53.0 11 0.00039 39.9 4.6 34 298-343 11-44 (499)
371 1q1r_A Putidaredoxin reductase 52.9 13 0.00044 38.4 5.0 37 299-345 4-40 (431)
372 1zmd_A Dihydrolipoyl dehydroge 52.9 11 0.00038 39.2 4.5 34 299-344 6-39 (474)
373 2aqj_A Tryptophan halogenase, 52.8 11 0.00038 40.0 4.5 37 299-344 5-41 (538)
374 3ruf_A WBGU; rossmann fold, UD 52.7 9.4 0.00032 37.4 3.7 101 297-414 23-151 (351)
375 2weu_A Tryptophan 5-halogenase 52.7 8.6 0.00029 40.3 3.6 37 300-345 3-39 (511)
376 3uuw_A Putative oxidoreductase 52.6 7.2 0.00025 38.3 2.8 90 298-411 5-95 (308)
377 3c4a_A Probable tryptophan hyd 52.5 12 0.00042 37.5 4.6 33 301-343 2-34 (381)
378 1mo9_A ORF3; nucleotide bindin 52.5 11 0.00036 40.2 4.3 35 298-344 42-76 (523)
379 1m6i_A Programmed cell death p 52.3 13 0.00045 39.2 5.0 38 298-345 10-47 (493)
380 2yqu_A 2-oxoglutarate dehydrog 52.2 12 0.0004 38.8 4.5 33 300-344 2-34 (455)
381 3uko_A Alcohol dehydrogenase c 52.0 25 0.00086 35.5 6.9 45 287-342 182-226 (378)
382 3ntd_A FAD-dependent pyridine 52.0 14 0.00049 39.1 5.2 36 300-345 2-37 (565)
383 3qj4_A Renalase; FAD/NAD(P)-bi 51.9 8 0.00028 38.0 3.1 34 301-343 3-36 (342)
384 3ihm_A Styrene monooxygenase A 51.7 11 0.00036 39.0 4.1 32 300-343 23-54 (430)
385 3gwf_A Cyclohexanone monooxyge 51.7 9.4 0.00032 41.2 3.8 36 298-344 7-42 (540)
386 3sxp_A ADP-L-glycero-D-mannohe 51.5 27 0.00092 34.5 6.9 108 295-414 6-138 (362)
387 2bry_A NEDD9 interacting prote 51.5 13 0.00043 39.5 4.7 36 298-345 91-126 (497)
388 1ges_A Glutathione reductase; 51.5 10 0.00034 39.5 3.8 33 299-343 4-36 (450)
389 4hkt_A Inositol 2-dehydrogenas 51.5 8.9 0.00031 38.0 3.3 89 300-411 4-92 (331)
390 4ep1_A Otcase, ornithine carba 51.4 68 0.0023 33.2 10.0 130 238-389 122-257 (340)
391 2v3a_A Rubredoxin reductase; a 51.1 11 0.00038 37.9 4.0 35 299-343 4-38 (384)
392 4gde_A UDP-galactopyranose mut 51.1 14 0.00048 38.1 4.9 23 299-321 10-32 (513)
393 1ebd_A E3BD, dihydrolipoamide 51.0 11 0.00037 39.0 4.0 32 300-343 4-35 (455)
394 3oc4_A Oxidoreductase, pyridin 50.9 13 0.00044 38.5 4.5 36 300-345 3-38 (452)
395 1sb8_A WBPP; epimerase, 4-epim 50.9 15 0.00052 36.1 4.9 101 297-414 25-153 (352)
396 2qa1_A PGAE, polyketide oxygen 50.8 12 0.0004 39.8 4.3 35 297-343 9-43 (500)
397 2zb4_A Prostaglandin reductase 50.8 28 0.00097 34.7 6.9 56 277-343 137-195 (357)
398 3c4n_A Uncharacterized protein 50.7 14 0.00048 37.5 4.8 35 300-344 37-71 (405)
399 3l8k_A Dihydrolipoyl dehydroge 50.7 13 0.00046 38.6 4.7 34 299-344 4-37 (466)
400 4a5l_A Thioredoxin reductase; 50.7 11 0.00039 35.9 3.8 32 300-343 5-36 (314)
401 2wm3_A NMRA-like family domain 50.5 6.7 0.00023 37.7 2.2 99 299-415 5-115 (299)
402 1lvl_A Dihydrolipoamide dehydr 50.3 12 0.00042 38.8 4.3 33 299-343 5-37 (458)
403 1vl0_A DTDP-4-dehydrorhamnose 50.2 18 0.0006 34.4 5.1 87 297-414 10-113 (292)
404 4b63_A L-ornithine N5 monooxyg 50.2 9.3 0.00032 40.6 3.4 22 301-322 41-62 (501)
405 1xq6_A Unknown protein; struct 49.6 18 0.00061 33.2 4.9 100 298-414 3-133 (253)
406 3evn_A Oxidoreductase, GFO/IDH 49.6 19 0.00065 35.7 5.4 93 298-411 4-96 (329)
407 4eez_A Alcohol dehydrogenase 1 49.6 36 0.0012 33.5 7.5 47 284-342 150-196 (348)
408 1v59_A Dihydrolipoamide dehydr 49.6 14 0.00049 38.3 4.7 34 299-344 5-38 (478)
409 1onf_A GR, grase, glutathione 49.5 12 0.00042 39.4 4.2 33 300-344 3-35 (500)
410 3ihg_A RDME; flavoenzyme, anth 49.5 12 0.00041 39.5 4.2 34 299-344 5-38 (535)
411 2bc0_A NADH oxidase; flavoprot 49.3 16 0.00053 38.4 4.9 37 299-344 35-71 (490)
412 1kyq_A Met8P, siroheme biosynt 49.2 10 0.00035 38.0 3.3 36 296-343 10-45 (274)
413 3sc6_A DTDP-4-dehydrorhamnose 49.2 11 0.00036 35.9 3.3 83 301-414 7-106 (287)
414 3o0h_A Glutathione reductase; 49.2 15 0.00051 38.5 4.7 33 299-343 26-58 (484)
415 2p2s_A Putative oxidoreductase 49.1 27 0.00093 34.6 6.5 84 298-402 3-88 (336)
416 3oqb_A Oxidoreductase; structu 48.9 11 0.00037 38.2 3.5 97 297-411 4-112 (383)
417 3moi_A Probable dehydrogenase; 48.9 6.6 0.00023 40.1 2.0 89 300-410 3-92 (387)
418 3tzq_B Short-chain type dehydr 48.7 18 0.00061 34.7 4.9 78 295-390 7-96 (271)
419 3un1_A Probable oxidoreductase 48.6 44 0.0015 31.9 7.7 76 297-390 26-107 (260)
420 1hdc_A 3-alpha, 20 beta-hydrox 48.4 17 0.00057 34.5 4.6 37 296-343 2-38 (254)
421 3uog_A Alcohol dehydrogenase; 48.4 15 0.00051 37.0 4.5 44 287-342 178-221 (363)
422 2ew2_A 2-dehydropantoate 2-red 48.4 16 0.00054 35.2 4.5 101 300-418 4-112 (316)
423 1f8f_A Benzyl alcohol dehydrog 48.4 40 0.0014 33.8 7.6 50 282-342 174-223 (371)
424 2cdc_A Glucose dehydrogenase g 48.4 42 0.0015 33.6 7.8 33 299-343 181-213 (366)
425 3fpz_A Thiazole biosynthetic e 48.3 16 0.00054 35.9 4.5 37 297-343 63-99 (326)
426 1dlj_A UDP-glucose dehydrogena 48.3 14 0.00047 38.4 4.3 30 301-343 2-31 (402)
427 1hxh_A 3BETA/17BETA-hydroxyste 48.0 12 0.00042 35.4 3.5 37 296-343 3-39 (253)
428 3e1t_A Halogenase; flavoprotei 47.9 13 0.00043 39.3 4.0 35 298-344 6-40 (512)
429 3lad_A Dihydrolipoamide dehydr 47.8 17 0.00056 37.8 4.8 33 299-343 3-35 (476)
430 3p19_A BFPVVD8, putative blue 47.7 19 0.00065 34.7 4.9 82 294-390 11-98 (266)
431 7mdh_A Protein (malate dehydro 47.6 23 0.00077 37.2 5.8 105 299-417 32-161 (375)
432 1xhc_A NADH oxidase /nitrite r 47.5 11 0.00037 38.2 3.3 35 299-346 8-42 (367)
433 2e1m_A L-glutamate oxidase; L- 47.5 16 0.00056 37.8 4.7 35 297-343 42-76 (376)
434 3n74_A 3-ketoacyl-(acyl-carrie 47.5 13 0.00044 35.1 3.6 78 295-390 5-94 (261)
435 2dtx_A Glucose 1-dehydrogenase 47.2 77 0.0026 30.1 9.2 76 296-390 5-85 (264)
436 3tpc_A Short chain alcohol deh 47.2 45 0.0015 31.4 7.4 77 296-390 4-92 (257)
437 3cgb_A Pyridine nucleotide-dis 47.2 13 0.00044 38.9 3.9 37 300-346 37-73 (480)
438 1kol_A Formaldehyde dehydrogen 47.1 35 0.0012 34.6 7.1 49 282-342 170-218 (398)
439 2fzw_A Alcohol dehydrogenase c 47.0 37 0.0013 34.0 7.1 45 287-342 179-223 (373)
440 3mz0_A Inositol 2-dehydrogenas 47.0 20 0.00068 35.8 5.1 93 300-411 3-95 (344)
441 1ojt_A Surface protein; redox- 46.9 16 0.00055 38.2 4.6 33 299-343 6-38 (482)
442 3l9w_A Glutathione-regulated p 46.9 9.2 0.00032 40.1 2.7 98 300-415 5-103 (413)
443 4fk1_A Putative thioredoxin re 46.9 16 0.00054 35.3 4.2 33 299-343 6-38 (304)
444 1rkx_A CDP-glucose-4,6-dehydra 46.9 32 0.0011 33.7 6.5 102 297-414 7-132 (357)
445 1e3j_A NADP(H)-dependent ketos 46.8 28 0.00096 34.7 6.2 48 282-342 153-200 (352)
446 2cdu_A NADPH oxidase; flavoenz 46.7 16 0.00055 37.7 4.5 34 301-344 2-35 (452)
447 2pyx_A Tryptophan halogenase; 46.7 13 0.00046 39.3 4.0 39 299-344 7-52 (526)
448 1p0f_A NADP-dependent alcohol 46.6 38 0.0013 34.1 7.1 36 296-342 189-224 (373)
449 2hcy_A Alcohol dehydrogenase 1 46.5 32 0.0011 34.2 6.5 44 286-342 158-202 (347)
450 2q2v_A Beta-D-hydroxybutyrate 46.4 16 0.00054 34.6 4.1 36 297-343 2-37 (255)
451 3i1j_A Oxidoreductase, short c 46.4 36 0.0012 31.6 6.5 38 295-343 10-47 (247)
452 1nhp_A NADH peroxidase; oxidor 46.4 17 0.00057 37.5 4.5 35 301-345 2-36 (447)
453 2gn4_A FLAA1 protein, UDP-GLCN 46.1 16 0.00055 36.4 4.2 101 295-414 17-142 (344)
454 1ek6_A UDP-galactose 4-epimera 46.1 20 0.00068 34.9 4.8 103 300-414 3-132 (348)
455 3lov_A Protoporphyrinogen oxid 46.0 23 0.00079 36.3 5.5 36 299-344 4-39 (475)
456 2r0c_A REBC; flavin adenine di 45.9 16 0.00056 39.0 4.5 33 299-343 26-58 (549)
457 1s3e_A Amine oxidase [flavin-c 45.8 17 0.00056 38.2 4.5 34 299-344 4-37 (520)
458 3ko8_A NAD-dependent epimerase 45.7 55 0.0019 31.2 7.9 94 301-414 2-113 (312)
459 2vvm_A Monoamine oxidase N; FA 45.7 18 0.0006 37.5 4.6 32 300-343 40-71 (495)
460 2gqf_A Hypothetical protein HI 45.6 14 0.00047 38.1 3.8 35 299-345 4-38 (401)
461 3g3e_A D-amino-acid oxidase; F 45.6 17 0.00058 35.7 4.3 37 301-344 2-39 (351)
462 3tpf_A Otcase, ornithine carba 45.6 1.2E+02 0.0041 30.8 10.6 128 238-387 88-222 (307)
463 1rp0_A ARA6, thiazole biosynth 45.6 17 0.00059 35.2 4.3 37 298-345 38-74 (284)
464 1xdi_A RV3303C-LPDA; reductase 45.5 16 0.00054 38.4 4.3 36 300-344 3-38 (499)
465 2rgh_A Alpha-glycerophosphate 45.4 17 0.00058 39.3 4.6 34 299-344 32-65 (571)
466 2bi7_A UDP-galactopyranose mut 45.4 17 0.00058 37.1 4.4 34 299-344 3-36 (384)
467 1o94_A Tmadh, trimethylamine d 45.4 17 0.00059 40.5 4.8 34 299-344 389-422 (729)
468 1cjc_A Protein (adrenodoxin re 45.3 21 0.00073 37.5 5.2 35 299-343 6-40 (460)
469 3fpc_A NADP-dependent alcohol 45.1 20 0.00068 35.8 4.7 50 282-343 151-200 (352)
470 1zk4_A R-specific alcohol dehy 45.1 15 0.0005 34.2 3.5 37 296-343 3-39 (251)
471 2cf5_A Atccad5, CAD, cinnamyl 45.0 44 0.0015 33.5 7.3 47 284-342 166-212 (357)
472 3dk9_A Grase, GR, glutathione 45.0 16 0.00055 38.0 4.2 34 298-343 19-52 (478)
473 3atr_A Conserved archaeal prot 45.0 9.7 0.00033 39.4 2.5 34 299-344 6-39 (453)
474 2ydy_A Methionine adenosyltran 44.9 36 0.0012 32.6 6.4 92 299-414 2-110 (315)
475 1fec_A Trypanothione reductase 44.8 22 0.00076 37.4 5.3 32 299-341 3-34 (490)
476 2i0z_A NAD(FAD)-utilizing dehy 44.8 17 0.00058 37.7 4.3 33 300-344 27-59 (447)
477 3da1_A Glycerol-3-phosphate de 44.8 14 0.0005 39.8 3.9 33 299-343 18-50 (561)
478 3k31_A Enoyl-(acyl-carrier-pro 44.6 24 0.00083 34.4 5.2 80 295-390 26-119 (296)
479 3euw_A MYO-inositol dehydrogen 44.3 28 0.00097 34.5 5.7 90 300-411 5-94 (344)
480 2yg5_A Putrescine oxidase; oxi 44.2 18 0.00062 36.8 4.4 35 298-344 4-38 (453)
481 1oi7_A Succinyl-COA synthetase 44.1 41 0.0014 33.5 6.8 126 299-462 7-136 (288)
482 1o5i_A 3-oxoacyl-(acyl carrier 44.0 72 0.0025 30.0 8.3 77 295-390 15-92 (249)
483 3e9m_A Oxidoreductase, GFO/IDH 44.0 16 0.00053 36.4 3.7 93 298-411 4-96 (330)
484 1gte_A Dihydropyrimidine dehyd 43.7 17 0.00057 42.5 4.4 34 299-343 187-220 (1025)
485 2d1y_A Hypothetical protein TT 43.7 34 0.0012 32.3 6.0 79 296-390 3-88 (256)
486 1wly_A CAAR, 2-haloacrylate re 43.6 35 0.0012 33.6 6.3 50 282-343 129-179 (333)
487 3nyc_A D-arginine dehydrogenas 43.6 14 0.00047 36.2 3.2 33 299-344 9-41 (381)
488 2b9w_A Putative aminooxidase; 43.0 20 0.0007 36.0 4.5 35 298-343 5-39 (424)
489 3d6n_B Aspartate carbamoyltran 43.0 2.7E+02 0.0094 28.0 13.4 127 237-389 85-215 (291)
490 1e3i_A Alcohol dehydrogenase, 43.0 40 0.0014 33.9 6.6 37 295-342 192-228 (376)
491 1pjq_A CYSG, siroheme synthase 42.9 22 0.00075 37.7 4.9 26 296-321 9-34 (457)
492 3r1i_A Short-chain type dehydr 42.9 55 0.0019 31.6 7.4 78 295-390 28-120 (276)
493 2iid_A L-amino-acid oxidase; f 42.8 25 0.00085 36.4 5.2 33 299-343 33-65 (498)
494 2i76_A Hypothetical protein; N 42.8 3.4 0.00012 40.3 -1.3 20 301-320 4-23 (276)
495 1xg5_A ARPG836; short chain de 42.7 47 0.0016 31.6 6.8 37 296-343 29-65 (279)
496 3g17_A Similar to 2-dehydropan 42.7 20 0.00069 35.1 4.3 98 300-422 3-104 (294)
497 4b7c_A Probable oxidoreductase 42.3 47 0.0016 32.7 6.9 51 280-342 131-182 (336)
498 2jhf_A Alcohol dehydrogenase E 42.2 41 0.0014 33.8 6.6 36 296-342 189-224 (374)
499 4dna_A Probable glutathione re 42.2 19 0.00065 37.3 4.2 33 299-343 5-37 (463)
500 3csu_A Protein (aspartate carb 42.2 2E+02 0.0067 29.3 11.6 129 238-388 95-230 (310)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=3.8e-189 Score=1516.43 Aligned_cols=508 Identities=51% Similarity=0.910 Sum_probs=499.1
Q ss_pred ccccccccCcCCccCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhcCCCchhHHHHHHHhHhhhhhhhHHHhhh
Q 008629 50 ASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLID 129 (559)
Q Consensus 50 ~~G~~~l~~p~~NKg~aFt~~ER~~l~l~GLlPp~v~t~e~Q~~r~~~~~~~~~~~l~Ky~~L~~L~~~Ne~Lfy~ll~~ 129 (559)
++|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++++|+||+||++||++||+||||++++
T Consensus 1 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 80 (555)
T 1gq2_A 1 KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTS 80 (555)
T ss_dssp CCTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhcCcceeeehhhHhh
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceecccCCCCCccccchhH
Q 008629 130 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 209 (559)
Q Consensus 130 ~~~e~lpivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG 209 (559)
|++|+|||+||||||++|++||+|||+|+|+|+|++|+|+++++++|||.++|+|||||||||||||||+|++|||||||
T Consensus 81 ~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvG 160 (555)
T 1gq2_A 81 DIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVG 160 (555)
T ss_dssp THHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHH
T ss_pred hHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCCCCccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhcCCCCCc--------------------------------chhHhHHHHHHHHHHhhCCCeeeeeccCCCCcH
Q 008629 210 KLALYTALGGIRPSA--------------------------------EYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA 257 (559)
Q Consensus 210 Kl~LY~a~gGI~P~~--------------------------------~y~~~vdefv~av~~~fGp~~lIq~EDf~~~~A 257 (559)
|++|||+||||||.+ +|++|+||||++|+++|||+++||||||+++||
T Consensus 161 Kl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~~~a 240 (555)
T 1gq2_A 161 KLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANA 240 (555)
T ss_dssp HHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEeecccCCccH
Confidence 999999999999887 799999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCeeecCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccE
Q 008629 258 FELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 337 (559)
Q Consensus 258 f~lL~ryr~~~~~FnDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i 337 (559)
|+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||+++|
T Consensus 241 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~-G~~~eeA~~~i 319 (555)
T 1gq2_A 241 FRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKE-GVSKEEAIKRI 319 (555)
T ss_dssp HHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHH-TCCHHHHHTTE
T ss_pred HHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChHHHhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999985 99999999999
Q ss_pred EEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 338 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 338 ~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
||||++|||+++|. +|+++|++||++.++.++|+|||+.+|||||||+|+++|+||+|+||+|+++|+|||||||||||
T Consensus 320 ~~~D~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt 398 (555)
T 1gq2_A 320 WMVDSKGLIVKGRA-SLTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPT 398 (555)
T ss_dssp EEEETTEECBTTCS-SCCTTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSSG
T ss_pred EEEECCCeeeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCC
Confidence 99999999999996 49999999999877778999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHhcccCCcEEEeeCCCCCCcee-CCeeeCccCccccccchhhHHHHHHhCCcccCHHHHHHHHHHHHhccC
Q 008629 418 SQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVT 496 (559)
Q Consensus 418 ~~~EctpedA~~wt~G~aifAsGSPF~pv~~-~G~~~~p~Q~NN~yiFPGlglG~l~~~a~~Itd~m~~aAA~aLA~~v~ 496 (559)
+++||+||||++||+|+|||||||||+||+| +||+++||||||+|+|||||||+++++|++|||+|+++||+|||++++
T Consensus 399 ~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~alA~~v~ 478 (555)
T 1gq2_A 399 SKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAEVIAQEVS 478 (555)
T ss_dssp GGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTCC
T ss_pred CccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccccceeeccchhhhhHhcCCeECCHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcccCCCCCccchHHHHHHHHHHHHHHhCCCCCCCCchhHHHHHHhCCcccCCCCCC
Q 008629 497 EENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 559 (559)
Q Consensus 497 ~~~~~~~~l~P~~~~ir~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~m~~P~Y~~~~ 559 (559)
++++..+.|||++++||+||.+||.||+++|+++|+|+..++|+|+.+|++++||+|+|++|+
T Consensus 479 ~~~~~~~~i~P~~~~ir~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~P~Y~~~~ 541 (555)
T 1gq2_A 479 EENLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTASTYPQPEDLEAFIRSQVYSTDYNCFV 541 (555)
T ss_dssp HHHHHHTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHTTSCCCSCCCCS
T ss_pred cccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHhccCCCCCCcc
Confidence 999999999999999999999999999999999999988788899999999999999999873
No 2
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=1.6e-188 Score=1519.21 Aligned_cols=512 Identities=46% Similarity=0.825 Sum_probs=502.0
Q ss_pred ccccccccccccCcCCccCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhcCCCchhHHHHHHHhHhhhhhhhHH
Q 008629 46 TISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYK 125 (559)
Q Consensus 46 ~~~~~~G~~~l~~p~~NKg~aFt~~ER~~l~l~GLlPp~v~t~e~Q~~r~~~~~~~~~~~l~Ky~~L~~L~~~Ne~Lfy~ 125 (559)
..+..+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++++|+||+||++||++||+||||
T Consensus 33 ~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfyr 112 (605)
T 1o0s_A 33 VTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQDRNEKLFYR 112 (605)
T ss_dssp CCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHCHHHHHH
T ss_pred cccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHhhcccchhhhh
Confidence 45568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCc--chHHHHHhcCCCCCeeEEEEecCceecccCCCCCcc
Q 008629 126 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEK--GKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQG 203 (559)
Q Consensus 126 ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~Glyis~~d~--g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~G 203 (559)
++++|++|+|||+||||||++|++||+|||+|+|+|+|++|+ |+++++|+|||.++|+|||||||||||||||||++|
T Consensus 113 ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g 192 (605)
T 1o0s_A 113 VVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYG 192 (605)
T ss_dssp HHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECSSCBTTTBCCGGGG
T ss_pred hhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEccccceecCCCCCCc
Confidence 999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHhHhcCCCCCc--------------------------------chhHhHHHHHHHHHHhhCCCeeeeecc
Q 008629 204 MGIPVGKLALYTALGGIRPSA--------------------------------EYAELLDEFMSAVKQNYGEKVLIQFED 251 (559)
Q Consensus 204 mgI~iGKl~LY~a~gGI~P~~--------------------------------~y~~~vdefv~av~~~fGp~~lIq~ED 251 (559)
|||||||++|||+||||||.+ +|++|+||||++|+++|||+++|||||
T Consensus 193 ~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~~fGp~~~I~~ED 272 (605)
T 1o0s_A 193 IGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFED 272 (605)
T ss_dssp GHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHHHHhCCCcEeeHhh
Confidence 999999999999999999876 799999999999999999999999999
Q ss_pred CCCCcHHHHHHHHcCCCCeeecCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChh
Q 008629 252 FANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVE 331 (559)
Q Consensus 252 f~~~~Af~lL~ryr~~~~~FnDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~e 331 (559)
|+++|||+||+|||++||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+.+|++ .|+|+|
T Consensus 273 f~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~-~Gl~~e 351 (605)
T 1o0s_A 273 FANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQN-EGISKE 351 (605)
T ss_dssp CCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHT-TTCCHH
T ss_pred cCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHH-cCCChh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998 499999
Q ss_pred hhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 008629 332 ETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 411 (559)
Q Consensus 332 eA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 411 (559)
||+++|||||++|||+++|. +|+++|++||++.++.++|+|||+.+|||||||+|+++|+||+|+||+|+++|+|||||
T Consensus 352 eA~~~i~~vD~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIF 430 (605)
T 1o0s_A 352 EACNRIYLMDIDGLVTKNRK-EMNPRHVQFAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIF 430 (605)
T ss_dssp HHHHTEEEEETTEECBTTCS-SCCGGGTTTCBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEE
T ss_pred hhhCeEEEEECCCceeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEE
Confidence 99999999999999999996 49999999999877778999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCCceeCCeeeCccCccccccchhhHHHHHHhCCcccCHHHHHHHHHHH
Q 008629 412 ALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEAL 491 (559)
Q Consensus 412 aLSNPt~~~EctpedA~~wt~G~aifAsGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~~~a~~Itd~m~~aAA~aL 491 (559)
||||||+++||+||||++||+|+|||||||||+||+|+||+++||||||+|+|||||||+++++|++|||+|+++||+||
T Consensus 431 aLSNPt~~aE~~pe~a~~~t~G~aivATGspF~pV~~~Grs~~pnQ~NN~liFPGi~lGal~~~A~~Itd~M~~aAA~aL 510 (605)
T 1o0s_A 431 ALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELNGHTYKPGQGNNAYIFPGVALGTILFQIRHVDNDLFLLAAKKV 510 (605)
T ss_dssp ECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEETTEEECCEECCGGGTHHHHHHHHHHHTBSCCCHHHHHHHHHHH
T ss_pred ECCCCCCCcCcCHHHHHhhccCCEEEEECCCCCCeeECCEEeccccccceeeccchhhhhhhcCCeEcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCccccCCCcccCCCCCccchHHHHHHHHHHHHHHhCCCCCCCCchhHHHHHHhCCcccCCCCCC
Q 008629 492 AKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 559 (559)
Q Consensus 492 A~~v~~~~~~~~~l~P~~~~ir~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~m~~P~Y~~~~ 559 (559)
|++++++++..+.|||++++||+||.+||.||+++|+++|+|+..++|+|+.+|++++||+|+|++|+
T Consensus 511 A~~v~~~~~~~~~i~P~~~dir~vs~~VA~AVa~~A~~~GvA~~~~~~~d~~~~i~~~~w~P~Y~~~~ 578 (605)
T 1o0s_A 511 ASCVTEDSLKVGRVYPQLKEIREISIQIAVEMAKYCYKNGTANLYPQPEDLEKYVRAQVYNTEYEELI 578 (605)
T ss_dssp HHTCCHHHHTTTCCSCCGGGHHHHHHHHHHHHHHHHHHTTCBCSSSCCSCHHHHHHHHSCCCSCCCCS
T ss_pred HhhcccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHhccCCCCCccc
Confidence 99999999999999999999999999999999999999999988788899999999999999999873
No 3
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=2.8e-188 Score=1513.67 Aligned_cols=509 Identities=49% Similarity=0.898 Sum_probs=499.5
Q ss_pred ccccccccCcCCccCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhcCCCchhHHHHHHHhHhhhhhhhHHHhhh
Q 008629 50 ASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLID 129 (559)
Q Consensus 50 ~~G~~~l~~p~~NKg~aFt~~ER~~l~l~GLlPp~v~t~e~Q~~r~~~~~~~~~~~l~Ky~~L~~L~~~Ne~Lfy~ll~~ 129 (559)
.+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++++|+||+||++||++||+||||++++
T Consensus 3 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 82 (564)
T 1pj3_A 3 EKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQD 82 (564)
T ss_dssp CCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhhcccceeehhhhhh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceecccCCCCCccccchhH
Q 008629 130 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 209 (559)
Q Consensus 130 ~~~e~lpivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG 209 (559)
|++|+|||+||||||++|++||+|||+|+|+|+|++|+++|+++|+|||.++|+|||||||||||||||+|++||+||||
T Consensus 83 ~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD~G~~gm~ipvG 162 (564)
T 1pj3_A 83 DIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVG 162 (564)
T ss_dssp CHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCCGGGGGHHHHH
T ss_pred CHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCCCCCCcccceeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhcCCCCCc--------------------------------chhHhHHHHHHHHHHhhCCCeeeeeccCCCCcH
Q 008629 210 KLALYTALGGIRPSA--------------------------------EYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA 257 (559)
Q Consensus 210 Kl~LY~a~gGI~P~~--------------------------------~y~~~vdefv~av~~~fGp~~lIq~EDf~~~~A 257 (559)
|++|||+||||||.+ +|++|+||||++|+++|||+++||||||+++||
T Consensus 163 Kl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~~~a 242 (564)
T 1pj3_A 163 KLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNA 242 (564)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEEeehhcCCccH
Confidence 999999999999887 799999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCeeecCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccE
Q 008629 258 FELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 337 (559)
Q Consensus 258 f~lL~ryr~~~~~FnDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i 337 (559)
|+||+|||++||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||+++|
T Consensus 243 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~-Gl~~eeA~~~i 321 (564)
T 1pj3_A 243 FRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVEN-GLSEQEAQKKI 321 (564)
T ss_dssp HHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHT-TCCHHHHHHTE
T ss_pred HHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHHc-CCChHHhhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999984 99999999999
Q ss_pred EEEcccCccccCCcCCCchhchhhccccCCC--CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 008629 338 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 415 (559)
Q Consensus 338 ~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~--~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 415 (559)
||||++|||+++|.++|+++|++||++.++. ++|+|||+.+|||||||+|+++|+||||+||+|+++|+|||||||||
T Consensus 322 ~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 401 (564)
T 1pj3_A 322 WMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSN 401 (564)
T ss_dssp EEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred EEEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 9999999999999445999999999987766 79999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHhcccCCcEEEeeCCCCCCcee-CCeeeCccCccccccchhhHHHHHHhCCcccCHHHHHHHHHHHHhc
Q 008629 416 PTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQ 494 (559)
Q Consensus 416 Pt~~~EctpedA~~wt~G~aifAsGSPF~pv~~-~G~~~~p~Q~NN~yiFPGlglG~l~~~a~~Itd~m~~aAA~aLA~~ 494 (559)
||+++||+||||++||+|+|||||||||+||+| +||+|+||||||+|+|||||||+++++|++|||+|+++||+|||++
T Consensus 402 Pt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~aLA~~ 481 (564)
T 1pj3_A 402 PTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAKALTSQ 481 (564)
T ss_dssp SGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHTTCSCCCHHHHHHHHHHHHTT
T ss_pred CCCccCcCHHHHHhhccCCEEEEeCCCCCceeecCCceecccccceeeeccchhhhhHhcCCeECCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred cCccccCCCcccCCCCCccchHHHHHHHHHHHHHHhCCCCCCCCchhHHHHHHhCCcccCCCCCC
Q 008629 495 VTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 559 (559)
Q Consensus 495 v~~~~~~~~~l~P~~~~ir~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~m~~P~Y~~~~ 559 (559)
++++++..+.|||+++++|+||.+||.||+++|+++|+|+..++|+|+.+|++++||+|.|++|+
T Consensus 482 v~~~~~~~~~i~P~~~~~r~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~p~Y~~~~ 546 (564)
T 1pj3_A 482 LTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVKERTWRSEYDSLL 546 (564)
T ss_dssp CCHHHHHTTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHHTCCCCSCCCCC
T ss_pred cccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHhhCCCCCCcc
Confidence 99999999999999999999999999999999999999988788899999999999999999873
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=1.7e-117 Score=943.83 Aligned_cols=371 Identities=31% Similarity=0.381 Sum_probs=334.3
Q ss_pred cccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceecccCCCCC-ccccchhHH
Q 008629 132 EELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGC-QGMGIPVGK 210 (559)
Q Consensus 132 ~e~lpivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~-~GmgI~iGK 210 (559)
.+.|||+||||||++|++|+ +|+++++++..+| ++|||||||||||||||+|+ +||||||||
T Consensus 58 ~~dLslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILGLGDiG~~agmpImeGK 120 (487)
T 3nv9_A 58 FNWFNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLGDGDVTPPGGLGVMEGK 120 (487)
T ss_dssp GGGHHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGGGBCCCGGGGHHHHHHH
T ss_pred HHHCeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeeeccccccccCCchhhhH
Confidence 35699999999999999986 4667777766666 58999999999999999999 589999999
Q ss_pred HHHHhHhcCCCCCc-----c---hhHhHHHHHHHHHHhhCCCe-eeeeccCCCCcHHHHHHHHcC--CCCeeecCCcchh
Q 008629 211 LALYTALGGIRPSA-----E---YAELLDEFMSAVKQNYGEKV-LIQFEDFANHNAFELLAKYGT--THLVFNDDIQGTA 279 (559)
Q Consensus 211 l~LY~a~gGI~P~~-----~---y~~~vdefv~av~~~fGp~~-lIq~EDf~~~~Af~lL~ryr~--~~~~FnDDiQGTa 279 (559)
++|||+|||||..+ - -.+.+||||++|+..| |+. .||||||++||||+||+|||+ +||||||||||||
T Consensus 121 l~Lyk~~aGId~lPI~LD~gt~~~~~d~defve~v~~~~-P~fG~InlEDf~ap~af~il~ryr~~~~ipvFnDD~qGTA 199 (487)
T 3nv9_A 121 ALLMKYLGGIDAVPICIDSKNKEGKNDPDAVIEFVQRIQ-HTFGAINLEDISQPNCYKILDVLRESCDIPVWHDDQQGTA 199 (487)
T ss_dssp HHHHHHHHCCEEEEEECCCBCTTSCBCHHHHHHHHHHHG-GGCSEEEECSCCTTHHHHHHHHHHHHCSSCEEETTTHHHH
T ss_pred HHHHHhcCCCceeeeEEeCCCccccCCHHHHHHHHHHhC-CCCCeecHhhcCCchHHHHHHHHHhhccCCccccccchHH
Confidence 99999999999877 1 1114666666666655 443 599999999999999999998 7999999999999
Q ss_pred HHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCc----
Q 008629 280 SVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ---- 355 (559)
Q Consensus 280 aV~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~---- 355 (559)
+|+||||+||+|++|++|+||||||+|||+||+|||+||+. .|+++ ++|||+|++|||+++|.+ |+
T Consensus 200 ~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~-----~G~~~----~~i~l~D~~Gli~~~R~~-l~~~~~ 269 (487)
T 3nv9_A 200 SVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVT-----AGADP----KKIVMFDSKGSLHNGRED-IKKDTR 269 (487)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHH-----TTCCG----GGEEEEETTEECCTTCHH-HHHCGG
T ss_pred HHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHH-----cCCCc----ccEEEEeccccccCCcch-hhhhcc
Confidence 99999999999999999999999999999999999999975 49986 899999999999999954 63
Q ss_pred -hhchhhccccC--CCCCHHHHhcccCCcEEEeccCC-CCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccc
Q 008629 356 -HFKKPWAHEHE--PVNNLLDAVKVIKPTILIGSSGV-GRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS 431 (559)
Q Consensus 356 -~~k~~fA~~~~--~~~~L~e~V~~vkPtvLIG~S~~-~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~EctpedA~~wt 431 (559)
++|.+||++.. +..+|+|||+. +|||||+|++ +|+||+|+||+|+ +||||||||||| +||+||||++
T Consensus 270 ~~~k~~~A~~~n~~~~~~L~eav~~--adVlIG~S~~~pg~ft~e~V~~Ma---~~PIIFaLSNPt--pEi~pe~A~~-- 340 (487)
T 3nv9_A 270 FYRKWEICETTNPSKFGSIAEACVG--ADVLISLSTPGPGVVKAEWIKSMG---EKPIVFCCANPV--PEIYPYEAKE-- 340 (487)
T ss_dssp GHHHHHHHHHSCTTCCCSHHHHHTT--CSEEEECCCSSCCCCCHHHHHTSC---SSCEEEECCSSS--CSSCHHHHHH--
T ss_pred cHHHHHHHHhcccccCCCHHHHHhc--CCEEEEecccCCCCCCHHHHHhhc---CCCEEEECCCCC--ccCCHHHHHH--
Confidence 46678888642 45799999997 7999999976 7999999999997 899999999999 7999999998
Q ss_pred CCcEEEeeCCCCCCceeCCeeeCccCccccccchhhHHHHHHhCCcccCHHHHHHHHHHHHhccCccccCCCcccCCCCC
Q 008629 432 KGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSN 511 (559)
Q Consensus 432 ~G~aifAsGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~~~a~~Itd~m~~aAA~aLA~~v~~~~~~~~~l~P~~~~ 511 (559)
+|+|||||| |+++||||||+|+|||||||+++++|++|||+|+++||++||++++++++..+.|||++++
T Consensus 341 ~G~aIvATG----------rsd~PnQ~NN~liFPGI~~Gal~~~A~~Itd~M~~AAA~ALA~~v~~~~l~~~~i~P~~~d 410 (487)
T 3nv9_A 341 AGAYIVATG----------RGDFPNQVNNSVGFPGILKGALIVRARKITDNMAIAASRALAEFAEKRGINPDNIIGTMDE 410 (487)
T ss_dssp TTCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHTCCBTTBCSCCTTC
T ss_pred hCCEEEEEC----------CCCCcccCcceeEcchhhHHHHHcCCcccCHHHHHHHHHHHHhhCCcccCCCCceeCCccc
Confidence 599999999 4678999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHhCCCCCC-CCchhHHHHHHhCC
Q 008629 512 IRKISANIAANVAAKAYELGVATRL-PRPQNLVKCAESCM 550 (559)
Q Consensus 512 ir~vs~~VA~aVa~~A~~~GvA~~~-~~~~d~~~~i~~~m 550 (559)
++||.+||.||+++|+++|+|+.. ++++++.+++++.+
T Consensus 411 -~~Vs~~VA~AVa~aA~~~GvA~~~~~~~~~~~~~~~~~~ 449 (487)
T 3nv9_A 411 -PGIFPKEAADVAMQAIKDGVARVTDLTWQQVYDIAEHDI 449 (487)
T ss_dssp -TTHHHHHHHHHHHHHHHHTCCSCCCCCHHHHHHHHHHHH
T ss_pred -cchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 789999999999999999999976 67889999998765
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=3.5e-110 Score=878.30 Aligned_cols=359 Identities=28% Similarity=0.389 Sum_probs=327.6
Q ss_pred hhhHHHhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceecccCCCC
Q 008629 121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 200 (559)
Q Consensus 121 ~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 200 (559)
.+++++.+++. |+|||+||||||++|++|+ ++| ++++ +|+.++++|+|||||+|||||||+|
T Consensus 23 ~~~~~~~~~~~-~~l~i~YtP~V~~~c~~i~---~~p----------~~v~----~~t~~~~~V~VvTdG~~iLGLGD~G 84 (398)
T 2a9f_A 23 EVQPKVDIKTK-HDLSIAYTPGVASVSSAIA---KDK----------TLAY----DLTTKKNTVAVISDGTAVLGLGDIG 84 (398)
T ss_dssp EEEESSCCSSH-HHHHHHSTTTTHHHHHHHH---HCG----------GGHH----HHSGGGTEEEEEECSSSCTTSCCCC
T ss_pred EEEEecccCCH-HHCeEEECchHHHHHHHHH---hCH----------HHHH----HhcccCCEEEEEECCccccCCCCcc
Confidence 45666677765 5589999999999999987 344 5554 6899999999999999999999999
Q ss_pred Cc-cccchhHHHHHHhHhcCCCCCc--chhHhHHHHHHHHHHhhCCC-eeeeeccCCCCcHHHHHHHHcCC--CCeeecC
Q 008629 201 CQ-GMGIPVGKLALYTALGGIRPSA--EYAELLDEFMSAVKQNYGEK-VLIQFEDFANHNAFELLAKYGTT--HLVFNDD 274 (559)
Q Consensus 201 ~~-GmgI~iGKl~LY~a~gGI~P~~--~y~~~vdefv~av~~~fGp~-~lIq~EDf~~~~Af~lL~ryr~~--~~~FnDD 274 (559)
++ |||||+||+.||++|||||..+ .....+||||++|++.| |. ..||||||+++|||++|+|||++ +||||||
T Consensus 85 ~~aG~pI~eGK~~Lf~~~agid~~pi~Ldv~~~dEfv~~v~~~~-p~F~~I~lED~~~p~~f~il~~~r~~~~ipvf~DD 163 (398)
T 2a9f_A 85 PEAAMPVMEGKAALFKAFAGVDAIPIVLDTKDTEEIISIVKALA-PTFGGINLEDISAPRCFEIEQRLIKECHIPVFHDD 163 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCEEEEEECCCCCHHHHHHHHHHHG-GGCSEEEECSCCTTHHHHHHHHHHHHCSSCEEEHH
T ss_pred cccCCcchhCHHHHHHhccCCceeeeEeCCCCHHHHHHHHHHcC-CceeEeccccCCChHHHHHHHHhhhcCCcceecch
Confidence 98 9999999999999999999777 23334999999999999 77 89999999999999999999974 9999999
Q ss_pred CcchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCC
Q 008629 275 IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL 354 (559)
Q Consensus 275 iQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l 354 (559)
|||||+|+|||++||+|++|++++|+||||+|||+||+|||++++.+ |+ ++||++|++|||+++|.++|
T Consensus 164 iqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~-----Ga------~~I~v~D~~Gli~~~R~~~L 232 (398)
T 2a9f_A 164 QHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA-----GA------TKVTVVDKFGIINEQEAAQL 232 (398)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEETTEECCTTCCCSC
T ss_pred hhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHc-----CC------CeEEEEECCCcccCCccccc
Confidence 99999999999999999999999999999999999999999999875 75 79999999999999993359
Q ss_pred chhchhhccccCC---CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccc
Q 008629 355 QHFKKPWAHEHEP---VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS 431 (559)
Q Consensus 355 ~~~k~~fA~~~~~---~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~EctpedA~~wt 431 (559)
+++|++||++... ..+|+|+|+. +|+|||+|+ ||+||+|+|++|+ ++|||||||||| |||+||||++|
T Consensus 233 ~~~k~~fa~~~~~~~~~~~L~eav~~--ADV~IG~Sa-pgl~T~EmVk~Ma---~~pIIfalsNPt--~E~~pe~a~~~- 303 (398)
T 2a9f_A 233 APHHLDIAKVTNREFKSGTLEDALEG--ADIFIGVSA-PGVLKAEWISKMA---ARPVIFAMANPI--PEIYPDEALEA- 303 (398)
T ss_dssp CC---CHHHHHSCTTCCCSCSHHHHT--TCSEEECCS-TTCCCHHHHHTSC---SSCEEEECCSSS--CSSCHHHHHTT-
T ss_pred hHHHHHHhhccCcccchhhHHHHhcc--CCEEEecCC-CCCCCHHHHHhhC---CCCEEEECCCCC--ccCCHHHHHHh-
Confidence 9999999987442 4689999997 899999999 8999999999998 899999999999 89999999999
Q ss_pred CCcEEEeeCCCCCCceeCCeeeCccCccccccchhhHHHHHHhCCcccCHHHHHHHHHHHHhccCccccCCCcccCCCCC
Q 008629 432 KGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSN 511 (559)
Q Consensus 432 ~G~aifAsGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~~~a~~Itd~m~~aAA~aLA~~v~~~~~~~~~l~P~~~~ 511 (559)
|+|||||| |+++|||+||+|+|||||||+++++|++|||+|+++||++||++++++++..++|||++++
T Consensus 304 -g~~i~atG----------rs~~p~Q~NN~~~FPgi~~Gal~~~a~~I~d~m~~aAa~alA~~~~~~~~~~~~i~P~~~~ 372 (398)
T 2a9f_A 304 -GAYIVGTG----------RSDFPNQINNVLAFPGIFRGALDARAKTITVEMQIAAAKGIASLVPDDALSTTNIIPDAFK 372 (398)
T ss_dssp -TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTCSSCSSCCSCCSCSSTT
T ss_pred -CCeEEEeC----------CCCCCCcCCceeEcchHHHHHHHcCCcCCCHHHHHHHHHHHHhcCCcccCCCCccCCCCCc
Confidence 99999999 6899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHh
Q 008629 512 IRKISANIAANVAAKAYEL 530 (559)
Q Consensus 512 ir~vs~~VA~aVa~~A~~~ 530 (559)
|+||.+||.||+++|++.
T Consensus 373 -~~v~~~VA~aVa~~A~~~ 390 (398)
T 2a9f_A 373 -EGVAEIVAKSVRSVVLKS 390 (398)
T ss_dssp -HHHHHHHTTTTCCCCC--
T ss_pred -chhHHHHHHHHHHHHHHh
Confidence 999999999999999864
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=8.1e-105 Score=836.36 Aligned_cols=352 Identities=30% Similarity=0.419 Sum_probs=325.7
Q ss_pred hhhHHHhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceecccCCCC
Q 008629 121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 200 (559)
Q Consensus 121 ~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 200 (559)
..++++.+++.++ |||+||||||++|++|+ ++|.+ ++ ||+.++++|+|||||||||||||+|
T Consensus 27 ~~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~---~~p~~----------v~----~~t~~~~~V~VvTdg~~vLGlGD~G 88 (388)
T 1vl6_A 27 RTALPVEKVDRET-LSLLYTPGVADVARACA---EDPEK----------TY----VYTSRWNTVAVVSDGSAVLGLGNIG 88 (388)
T ss_dssp EEECSCSCCCHHH-HHHHSTTTHHHHHHHHH---HCGGG----------HH----HHSGGGGEEEEEECSTTBTTTBSCC
T ss_pred EEEEeeecCCHHH-CeEEECchHHHHHHHHH---hCHHH----------HH----hhcccCCeEEEEECCccccCCCccc
Confidence 5678888888866 89999999999999987 55544 44 6899999999999999999999999
Q ss_pred Cc-cccchhHHHHHHhHhcCCCCCc--chhHhHHHHHHHHHHhhCCC-eeeeeccCCCCcHHHHHHHHcC--CCCeeecC
Q 008629 201 CQ-GMGIPVGKLALYTALGGIRPSA--EYAELLDEFMSAVKQNYGEK-VLIQFEDFANHNAFELLAKYGT--THLVFNDD 274 (559)
Q Consensus 201 ~~-GmgI~iGKl~LY~a~gGI~P~~--~y~~~vdefv~av~~~fGp~-~lIq~EDf~~~~Af~lL~ryr~--~~~~FnDD 274 (559)
++ |||||+||+.||++|||||..+ .....+||||++|++.| |. ..||||||+++|||++|+|||+ ++||||||
T Consensus 89 ~~ag~pI~egK~~Lf~~~agid~~pi~ldv~~~dE~v~~vk~~~-p~f~~i~lED~~~p~af~il~r~r~~~~Ipvf~DD 167 (388)
T 1vl6_A 89 PYGALPVMEGKAFLFKAFADIDAFPICLSESEEEKIISIVKSLE-PSFGGINLEDIGAPKCFRILQRLSEEMNIPVFHDD 167 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEECSCCCHHHHHHHHHHTG-GGCSEEEECSCCTTHHHHHHHHHHHHCSSCEEEHH
T ss_pred cccCCcchhCHHHHHHhccCCceEeEEeCCCCHHHHHHHHHHcC-CcceEeCHhhcCCHHHHHHHHHhhhhcCcceeccc
Confidence 98 9999999999999999999777 23334999999999999 77 8899999999999999999997 59999999
Q ss_pred CcchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCC-
Q 008629 275 IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS- 353 (559)
Q Consensus 275 iQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~- 353 (559)
|||||+|++||+++|++++|++++|+||||+|||+||+++|++|+.. | .++||++|++|||+.+|.+.
T Consensus 168 iqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~-----G------~~~I~v~Dr~Gli~~~R~~~~ 236 (388)
T 1vl6_A 168 QQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDL-----G------VKNVVAVDRKGILNENDPETC 236 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHH-----T------CCEEEEEETTEECCTTSGGGC
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhC-----C------CCeEEEEECCCcccCCCcccc
Confidence 99999999999999999999999999999999999999999999874 6 38999999999999999643
Q ss_pred CchhchhhccccCC---CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcc
Q 008629 354 LQHFKKPWAHEHEP---VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 430 (559)
Q Consensus 354 l~~~k~~fA~~~~~---~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~EctpedA~~w 430 (559)
|+++|++||++... ..+|.|+|+. +|+|||+|+ +|+||+|+|+.|+ ++||||+||||| |||+||||++|
T Consensus 237 L~~~k~~~A~~~~~~~~~~~L~eav~~--ADVlIG~Sa-p~l~t~emVk~Ma---~~pIIfalSNPt--~E~~p~~a~~~ 308 (388)
T 1vl6_A 237 LNEYHLEIARITNPERLSGDLETALEG--ADFFIGVSR-GNILKPEWIKKMS---RKPVIFALANPV--PEIDPELAREA 308 (388)
T ss_dssp SSHHHHHHHHTSCTTCCCSCHHHHHTT--CSEEEECSC-SSCSCHHHHTTSC---SSCEEEECCSSS--CSSCHHHHHHT
T ss_pred cCHHHHHHHHhhhccCchhhHHHHHcc--CCEEEEeCC-CCccCHHHHHhcC---CCCEEEEcCCCC--CCCCHHHHHHh
Confidence 99999999987442 4689999997 899999999 7999999999998 799999999999 99999999999
Q ss_pred cCCcEEEeeCCCCCCceeCCeeeCccCccccccchhhHHHHHHhCCcccCHHHHHHHHHHHHhccCccccCCCcccCCCC
Q 008629 431 SKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFS 510 (559)
Q Consensus 431 t~G~aifAsGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~~~a~~Itd~m~~aAA~aLA~~v~~~~~~~~~l~P~~~ 510 (559)
|+|||||| |+++|||+||+|+|||||||+++++|+ |||+|+++||++||+++ ++..++|||+++
T Consensus 309 --g~~i~atG----------r~~~p~Q~NN~~~FPgi~~Gal~~~a~-i~~~m~~aAa~alA~~~---~~~~~~i~P~~~ 372 (388)
T 1vl6_A 309 --GAFIVATG----------RSDHPNQVNNLLAFPGIMKGAVEKRSK-ITKNMLLSAVEAIARSC---EPEPERIIPEAF 372 (388)
T ss_dssp --TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHCSC-CCHHHHHHHHHHHHHTS---CCBTTBSSCCTT
T ss_pred --cCeEEEeC----------CCCCCCcCCceeEcchHhHHHHhcCCc-cCHHHHHHHHHHHHhhh---ccCCCcccCCCC
Confidence 99999999 689999999999999999999999999 99999999999999999 678899999999
Q ss_pred CccchHHHHHHHHHHHH
Q 008629 511 NIRKISANIAANVAAKA 527 (559)
Q Consensus 511 ~ir~vs~~VA~aVa~~A 527 (559)
+ |+||.+||.||+++|
T Consensus 373 ~-~~v~~~vA~aVa~~A 388 (388)
T 1vl6_A 373 D-MKVHLNVYTAVKGSA 388 (388)
T ss_dssp C-HHHHHHHHHHHHHCC
T ss_pred c-chhhHHHHHHHHhhC
Confidence 9 999999999999865
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=1.3e-85 Score=702.01 Aligned_cols=383 Identities=30% Similarity=0.414 Sum_probs=346.0
Q ss_pred hhhHHHhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceecccCCCC
Q 008629 121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 200 (559)
Q Consensus 121 ~Lfy~ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 200 (559)
..++++.+++.+ +|||+||||||++|++|++ |++++++ ||.++|+|+|||||+|||||||+|
T Consensus 21 ~~~~~~~~~~~~-~l~~~YtP~v~~~c~~~~~-------------~~~~~~~----~~~~~~~v~vvtdgt~ilGlG~iG 82 (439)
T 2dvm_A 21 EVIPKVSLESRE-ELTLAYTPGVAEPCKEIAR-------------DPGKVYE----YTSKGNLVAVVSDGSRILGLGNIG 82 (439)
T ss_dssp EEEESSCCCSHH-HHHHHSTTTTHHHHHHHHH-------------CGGGHHH----HSSGGGEEEEEECSTTBTTTBCCC
T ss_pred EEEEeeccCCHH-HCeeEECchhHHHHHHHHH-------------CHHHHHh----hcccCcEEEEEECCCeEeccccee
Confidence 345666777665 5899999999999999983 6677775 888999999999999999999999
Q ss_pred Cc-cccchhHHHHHHhHhcCCCCCc-chhH-hHHHHHHHHHHhhCCC-eeeeeccCCCCcHHHHHHHHcC--CCCeeecC
Q 008629 201 CQ-GMGIPVGKLALYTALGGIRPSA-EYAE-LLDEFMSAVKQNYGEK-VLIQFEDFANHNAFELLAKYGT--THLVFNDD 274 (559)
Q Consensus 201 ~~-GmgI~iGKl~LY~a~gGI~P~~-~y~~-~vdefv~av~~~fGp~-~lIq~EDf~~~~Af~lL~ryr~--~~~~FnDD 274 (559)
.+ ++|+++||++||++|||||-.+ ..+- .+|||+++|+..| |+ ..||||||+.||||++|++|++ ++||||||
T Consensus 83 ~hS~sPvmh~ka~lf~~~gGid~~yi~ldv~d~de~~~~v~~l~-~~f~GinvED~T~P~k~~il~~l~~avNt~vf~dD 161 (439)
T 2dvm_A 83 PLAGLPVMEGKALLFKRFGGVDAFPIMIKEQEPNKFIDIVKAIA-PTFGGINLEDIASPKCFYILERLREELDIPVFHDD 161 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEECSCCSHHHHHHHHHHTG-GGCSEEEECSCCTTHHHHHHHHHHHHCSSCEEEHH
T ss_pred ccccCHHHHHHHHHHHHhCCCCCeeeeeecCCHHHHHHHHHHhC-ccCcEEEEEeCCCchHHHHHHHHHHhcCEEEEeCC
Confidence 97 7999999999999999999666 3333 6899999999876 55 6799999999999999999986 79999999
Q ss_pred CcchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEc----ccCccccCC
Q 008629 275 IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD----SKGLIVSSR 350 (559)
Q Consensus 275 iQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD----~~GLi~~~R 350 (559)
+||||.+.++|+++|++..|++++++|+||+|||+||.+|+.+|... |+++ ++||++| ++||+++.
T Consensus 162 ~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~~-----G~~~----~~I~vvd~~~~R~G~~~~a- 231 (439)
T 2dvm_A 162 QQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTEA-----GVKP----ENVRVVELVNGKPRILTSD- 231 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHHT-----TCCG----GGEEEEEEETTEEEECCTT-
T ss_pred CcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHHc-----CCCc----CeEEEEEccCCCcCccccc-
Confidence 99999999999999999999999999999999999999999999863 8753 7899999 99999886
Q ss_pred cCC---CchhchhhccccC---CCCCHHHHhcccCCcEEEeccCCC-CCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCC
Q 008629 351 KDS---LQHFKKPWAHEHE---PVNNLLDAVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALSNPTSQSECT 423 (559)
Q Consensus 351 ~~~---l~~~k~~fA~~~~---~~~~L~e~V~~vkPtvLIG~S~~~-g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ect 423 (559)
+. |.+++++|++... ...+|.|+++. +|+|||+|+.+ |+|++++++.|+ ++||||+||||+ +||+
T Consensus 232 -~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~--aDVlInaT~~~~G~~~~e~v~~m~---~~~iVfDLynP~--~t~~ 303 (439)
T 2dvm_A 232 -LDLEKLFPYRGWLLKKTNGENIEGGPQEALKD--ADVLISFTRPGPGVIKPQWIEKMN---EDAIVFPLANPV--PEIL 303 (439)
T ss_dssp -SCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTT--CSEEEECSCCCSSSSCHHHHTTSC---TTCEEEECCSSS--CSSC
T ss_pred -cchhHHHHHHHHHhhccccccccccHHHHhcc--CCEEEEcCCCccCCCChHHHHhcC---CCCEEEECCCCC--Ccch
Confidence 24 7888888987532 24689999986 89999999985 899999999886 899999999999 8999
Q ss_pred HHHHhcccCCcEEEeeCCCCCCceeCCeeeCccCccccccchhhHHHHHHhCCcccCHHHHHHHHHHHHhccCccccCCC
Q 008629 424 AEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKG 503 (559)
Q Consensus 424 pedA~~wt~G~aifAsGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~~~a~~Itd~m~~aAA~aLA~~v~~~~~~~~ 503 (559)
+++|.+| |++++||| +++.|+|+||+|+|||||+|+++++|++|||+|+++||++||++++++ ..+
T Consensus 304 ~~~A~~~--G~~ivatG----------~~ml~~Q~nn~~~FPGi~~g~l~~~a~~i~~~m~~aaa~ala~~~~~~--~~~ 369 (439)
T 2dvm_A 304 PEEAKKA--GARIVATG----------RSDYPNQINNLLGFPGIFRGALDVRARTITDSMIIAAAKAIASIVEEP--SEE 369 (439)
T ss_dssp HHHHHHH--TCSEECBS----------CSSSSSBCCGGGTHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHTSSSC--BTT
T ss_pred HHHHHHc--CCeEEcCC----------CchhHHHHHHHhcccCchHHHHhcCCCCCCHHHHHHHHHHHHhhCccc--cCC
Confidence 9999998 88999998 689999999999999999999999999999999999999999999876 789
Q ss_pred cccCCCCCccchHHHHHHHHHHHHHHhCCCCCCCCchhHHHHHHhCCcccCC
Q 008629 504 LIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTPVY 555 (559)
Q Consensus 504 ~l~P~~~~ir~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~m~~P~Y 555 (559)
.|||++++ |+||.+||.||+++|+++|+|+..++|+|+.+|+++.||.+.|
T Consensus 370 ~i~P~~~~-~~v~~~va~av~~~a~~~g~a~~~~~~~~~~~~~~~~~~~~~~ 420 (439)
T 2dvm_A 370 NIIPSPLN-PIVYAREARAVAEEAMKEGVARTKVKGEWVEEHTIRLIEFYEN 420 (439)
T ss_dssp BCSCCTTC-HHHHHHHHHHHHHHHHHHTCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCccc-chhhHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHhhhhHH
Confidence 99999999 9999999999999999999998777789999999999998754
No 8
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.79 E-value=5.7e-08 Score=103.96 Aligned_cols=127 Identities=13% Similarity=0.205 Sum_probs=102.8
Q ss_pred CCCee----------ecCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhccc
Q 008629 267 THLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKK 336 (559)
Q Consensus 267 ~~~~F----------nDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~ 336 (559)
.+|+| .|++.||+-++++|+..+ ++..|.+.+++|+|+|..|.++|+.+... |. +
T Consensus 181 ~~Pvi~vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~GktV~ViG~G~IGk~vA~~Lra~-----Ga-------~ 245 (435)
T 3gvp_A 181 CVPAMNVNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGGKQVVVCGYGEVGKGCCAALKAM-----GS-------I 245 (435)
T ss_dssp CSCEEECTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------E
T ss_pred CCCEEEecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecCCEEEEEeeCHHHHHHHHHHHHC-----CC-------E
Confidence 69999 899999999999999765 79999999999999999999999988653 64 5
Q ss_pred EEEEcccCccccCCcCCCchhchhhcc-ccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 008629 337 ICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 415 (559)
Q Consensus 337 i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 415 (559)
++.+|.+.. +...|. ..-...+|.|+++. .|++|.+++..++++++.++.|. +..||+-.++
T Consensus 246 Viv~D~dp~------------ra~~A~~~G~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK---~gailINvgr 308 (435)
T 3gvp_A 246 VYVTEIDPI------------CALQACMDGFRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK---NSCIVCNMGH 308 (435)
T ss_dssp EEEECSCHH------------HHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC---TTEEEEECSS
T ss_pred EEEEeCChh------------hhHHHHHcCCEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcC---CCcEEEEecC
Confidence 888886521 111121 11113579999985 99999998888999999999997 7889999999
Q ss_pred CCCCCCCCHHHH
Q 008629 416 PTSQSECTAEEA 427 (559)
Q Consensus 416 Pt~~~EctpedA 427 (559)
+. .|+..+..
T Consensus 309 g~--~EId~~~L 318 (435)
T 3gvp_A 309 SN--TEIDVASL 318 (435)
T ss_dssp TT--TTBTGGGG
T ss_pred CC--ccCCHHHH
Confidence 97 88887665
No 9
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.75 E-value=2.2e-08 Score=107.14 Aligned_cols=130 Identities=17% Similarity=0.194 Sum_probs=105.4
Q ss_pred CCCCee----------ecCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcc
Q 008629 266 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 335 (559)
Q Consensus 266 ~~~~~F----------nDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~ 335 (559)
..+|+| .|++.||+.+++.|++. .++..|.+.+++|+|.|..|.++|+.+... |.
T Consensus 171 L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~r---atg~~L~GktVgIiG~G~IG~~vA~~Lka~-----Ga------- 235 (436)
T 3h9u_A 171 LTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR---ATDVMIAGKTACVCGYGDVGKGCAAALRGF-----GA------- 235 (436)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHH---HHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCceEeechhhhhhhhhccccchHHHHHHHHH---hcCCcccCCEEEEEeeCHHHHHHHHHHHHC-----CC-------
Confidence 579999 89999999999999964 579999999999999999999999998753 64
Q ss_pred cEEEEcccCccccCCcCCCchhchhhcc-ccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 008629 336 KICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 336 ~i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 414 (559)
+++++|++.. +...|. ..-...+|.|+++. .|++|.+++..++++++.++.|. +..||+-+|
T Consensus 236 ~Viv~D~~p~------------~a~~A~~~G~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK---~gAIVINvg 298 (436)
T 3h9u_A 236 RVVVTEVDPI------------NALQAAMEGYQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR---DDAIVCNIG 298 (436)
T ss_dssp EEEEECSCHH------------HHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC---TTEEEEECS
T ss_pred EEEEECCChh------------hhHHHHHhCCeecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcC---CCcEEEEeC
Confidence 5888887421 111111 11123489999985 99999988888899999999997 789999999
Q ss_pred CCCCCCCCCHHHHhc
Q 008629 415 NPTSQSECTAEEAYT 429 (559)
Q Consensus 415 NPt~~~EctpedA~~ 429 (559)
++. .|+.++...+
T Consensus 299 Rg~--vEID~~~L~~ 311 (436)
T 3h9u_A 299 HFD--TEIQVAWLKA 311 (436)
T ss_dssp SSG--GGBCHHHHHH
T ss_pred CCC--CccCHHHHHh
Confidence 998 8999987765
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.99 E-value=2e-06 Score=90.71 Aligned_cols=218 Identities=18% Similarity=0.236 Sum_probs=126.9
Q ss_pred CcchHHHHHhcCCCCCeeEEEEecCceecccCCCCCc--cccchhHHHHHHhHhcCCCCCcchhHhHHHHHHHHHHhhCC
Q 008629 166 EKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLALYTALGGIRPSAEYAELLDEFMSAVKQNYGE 243 (559)
Q Consensus 166 d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~LY~a~gGI~P~~~y~~~vdefv~av~~~fGp 243 (559)
++..++++.++ +.+|+|.++++..+|++|.+.. |+.|+.+ ..+|. |-.|= .-.+-..+.+..+++ .
T Consensus 26 tP~~v~~L~~~----G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-adiil---~vk~p~~~~i~~l~~---~ 93 (401)
T 1x13_A 26 TPKTVEQLLKL----GFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-SEIIL---KVNAPLDDEIALLNP---G 93 (401)
T ss_dssp CHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-SSEEE---CSSCCCHHHHTTCCT---T
T ss_pred CHHHHHHHHHC----CCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-CCeEE---EeCCCCHHHHHHhcC---C
Confidence 34455555553 4589999999999999999875 8888888 56665 21110 000012344444432 1
Q ss_pred CeeeeeccCC-CCcHHHHHHHHc-CCCCeee-cCC------c----chhHHHHHHHHHHHHHh----CC----------C
Q 008629 244 KVLIQFEDFA-NHNAFELLAKYG-TTHLVFN-DDI------Q----GTASVVLAGVVAALKLI----GG----------T 296 (559)
Q Consensus 244 ~~lIq~EDf~-~~~Af~lL~ryr-~~~~~Fn-DDi------Q----GTaaV~LAgll~Alr~~----g~----------~ 296 (559)
..+|.+=..+ ++. ++++.+ ..+.+|+ +.+ | .+....+|| .+|++.. ++ .
T Consensus 94 ~~li~~~~~~~d~~---~~~al~~~gI~v~~~e~v~~~~~a~~l~~l~~~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~ 169 (401)
T 1x13_A 94 TTLVSFIWPAQNPE---LMQKLAERNVTVMAMDSVPRISRAQSLDALSSMANIAG-YRAIVEAAHEFGRFFTGQITAAGK 169 (401)
T ss_dssp CEEEECCCGGGCHH---HHHHHHHTTCEEEEGGGCCCSGGGGGGCHHHHHHHHHH-HHHHHHHHHHCSSCSSCEEETTEE
T ss_pred CcEEEEecCCCCHH---HHHHHHHCCCEEEEeehhhhhhhhcccchHHHHHHHHH-HHHHHHHHHhcccccCCceeeccC
Confidence 1223222221 233 344443 5788873 222 2 455556665 3444432 22 2
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCch------------hchhhccc
Q 008629 297 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH------------FKKPWAHE 364 (559)
Q Consensus 297 l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~------------~k~~fA~~ 364 (559)
+...+|+|+|+|.+|.++++++.. .|. +++++|++.-..... +.+.. .+..|++.
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~v~D~~~~~~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~ 236 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANS-----LGA-------IVRAFDTRPEVKEQV-QSMGAEFLELDFKEEAGSGDGYAKV 236 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCGGGHHHH-HHTTCEECCC--------CCHHHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEcCCHHHHHHH-HHcCCEEEEecccccccccccchhh
Confidence 568999999999999999988764 263 588898864321100 00100 00011111
Q ss_pred cCC------CCCHHHHhcccCCcEEEeccCCC-----CCCCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 365 HEP------VNNLLDAVKVIKPTILIGSSGVG-----RTFTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 365 ~~~------~~~L~e~V~~vkPtvLIG~S~~~-----g~Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
..+ ..+|.+.++. .|++|++...+ .+++++.++.|. +..+|+-+|+|.
T Consensus 237 ~~~~~~~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~mk---~g~vIVdva~~~ 295 (401)
T 1x13_A 237 MSDAFIKAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSMK---AGSVIVDLAAQN 295 (401)
T ss_dssp HSHHHHHHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTSC---TTCEEEETTGGG
T ss_pred ccHHHHHHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC---CCcEEEEEcCCC
Confidence 000 0147777775 89999996443 678999999997 788999999873
No 11
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.88 E-value=5.9e-05 Score=81.28 Aligned_cols=128 Identities=16% Similarity=0.185 Sum_probs=98.2
Q ss_pred CCCCee----------ecCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcc
Q 008629 266 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 335 (559)
Q Consensus 266 ~~~~~F----------nDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~ 335 (559)
..+|+| .|+..||+-.++.|+. |.+|..|...+++|+|.|..|.++|+.+... |+
T Consensus 207 L~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~GKTVgVIG~G~IGr~vA~~lraf-----Ga------- 271 (464)
T 3n58_A 207 LPFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAGKVAVVCGYGDVGKGSAQSLAGA-----GA------- 271 (464)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccCCEEEEECcCHHHHHHHHHHHHC-----CC-------
Confidence 479999 6778999999888885 5679999999999999999999999988653 64
Q ss_pred cEEEEcccCccccCCcCCCchhchhhcc-ccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 008629 336 KICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 336 ~i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 414 (559)
+++++|.+.. ....|. ..-...+|.|+++. .|+++-+++..++++++.++.|. +..||.-.+
T Consensus 272 ~Viv~d~dp~------------~a~~A~~~G~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK---~GAILINvG 334 (464)
T 3n58_A 272 RVKVTEVDPI------------CALQAAMDGFEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMK---DMCIVGNIG 334 (464)
T ss_dssp EEEEECSSHH------------HHHHHHHTTCEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSC---TTEEEEECS
T ss_pred EEEEEeCCcc------------hhhHHHhcCceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCC---CCeEEEEcC
Confidence 5887775321 101111 11122479999985 99999998888899999999997 788998888
Q ss_pred CCCCCCCCCHHHH
Q 008629 415 NPTSQSECTAEEA 427 (559)
Q Consensus 415 NPt~~~EctpedA 427 (559)
+.. .|+..+..
T Consensus 335 Rgd--vEID~~aL 345 (464)
T 3n58_A 335 HFD--NEIQVAAL 345 (464)
T ss_dssp SST--TTBTCGGG
T ss_pred CCC--cccCHHHH
Confidence 876 66665544
No 12
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.88 E-value=3.5e-05 Score=83.66 Aligned_cols=132 Identities=15% Similarity=0.195 Sum_probs=100.7
Q ss_pred CCCCee----------ecCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcc
Q 008629 266 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 335 (559)
Q Consensus 266 ~~~~~F----------nDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~ 335 (559)
..+|+| .|+++||+..++.|+. |.++..|.+.+++|.|+|..|.++|+.+.. .|.
T Consensus 225 L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa-----~GA------- 289 (488)
T 3ond_A 225 LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVAGYGDVGKGCAAALKQ-----AGA------- 289 (488)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------
T ss_pred CCCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccCCEEEEECCCHHHHHHHHHHHH-----CCC-------
Confidence 479999 6899999999999886 789999999999999999888888888765 363
Q ss_pred cEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 008629 336 KICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 415 (559)
Q Consensus 336 ~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 415 (559)
+++++|++.. + .... +...-...++.++++. .|+++-.++..++++.+.++.|. +..||+-.++
T Consensus 290 ~Viv~D~~~~----~---a~~A----a~~g~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk---~gaiVvNaG~ 353 (488)
T 3ond_A 290 RVIVTEIDPI----C---ALQA----TMEGLQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMK---NNAIVCNIGH 353 (488)
T ss_dssp EEEEECSCHH----H---HHHH----HHTTCEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSC---TTEEEEESSS
T ss_pred EEEEEcCCHH----H---HHHH----HHhCCccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcC---CCeEEEEcCC
Confidence 6888887421 1 1111 1111122467777764 89999998888899999999886 7889999999
Q ss_pred CCCCCCCCHHHHhcc
Q 008629 416 PTSQSECTAEEAYTW 430 (559)
Q Consensus 416 Pt~~~EctpedA~~w 430 (559)
+. .|...++.-.|
T Consensus 354 ~~--~Ei~~~~l~~~ 366 (488)
T 3ond_A 354 FD--NEIDMLGLETH 366 (488)
T ss_dssp TT--TTBTHHHHHTS
T ss_pred CC--cccchHHHHHh
Confidence 85 78888776555
No 13
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.06 E-value=0.00064 Score=72.25 Aligned_cols=110 Identities=17% Similarity=0.218 Sum_probs=71.8
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCc--------------hhchhh
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ--------------HFKKPW 361 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~--------------~~k~~f 361 (559)
.+...||+|+|+|.+|..+|+++... |. +++++|++.-......+ +- +-+..|
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~y 253 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRL-----GA-------VVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGY 253 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSTTHHHHHHH-TTCEECCCCC------------
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEcCCHHHHHHHHH-cCCceeecccccccccccccch
Confidence 46789999999999999999988653 63 58899987532111000 00 001124
Q ss_pred ccccCC------CCCHHHHhcccCCcEEEeccCC-----CCCCCHHHHHHHHcCCCCcEEEecCC-CCCCCCCC
Q 008629 362 AHEHEP------VNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMASFNEKPLILALSN-PTSQSECT 423 (559)
Q Consensus 362 A~~~~~------~~~L~e~V~~vkPtvLIG~S~~-----~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~~Ect 423 (559)
+++..+ ..+|.|+++. .|++|++... +.+||+++++.|. +.+||+-+|- |-...|+|
T Consensus 254 a~e~s~~~~~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk---~GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 254 AKEMSGEYQVKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMK---PGSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp -----CHHHHHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSC---TTCEEEETTGGGTCSBTTC
T ss_pred hhhcchhhhhhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCC---CCCEEEEEeCCCCCCcccc
Confidence 432111 1368999985 9999998533 4579999999997 8899999995 33345554
No 14
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.70 E-value=0.0017 Score=68.44 Aligned_cols=100 Identities=22% Similarity=0.228 Sum_probs=67.5
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchh-------------chhhcc
Q 008629 297 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-------------KKPWAH 363 (559)
Q Consensus 297 l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~-------------k~~fA~ 363 (559)
+...|++|+|+|.+|..+|+.+... |. +++++|++.-.. +.+... ...|++
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l----~~~~~lGa~~~~l~~~~~~~~gya~ 245 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPEVA----EQVRSVGAQWLDLGIDAAGEGGYAR 245 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGGGH----HHHHHTTCEECCCC-----------
T ss_pred cCCCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHH----HHHHHcCCeEEeccccccccccchh
Confidence 5789999999999999999988754 63 588999874211 001110 011221
Q ss_pred cc------CCCCCHHHHhcccCCcEEEeccCC-----CCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 364 EH------EPVNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 364 ~~------~~~~~L~e~V~~vkPtvLIG~S~~-----~g~Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
.. ....+|.++++. .|++|++... +.+||+++++.|. +..+|+-+|=+.
T Consensus 246 ~~~~~~~~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mk---pGsVIVDvA~d~ 305 (381)
T 3p2y_A 246 ELSEAERAQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQ---PGSVVVDLAGET 305 (381)
T ss_dssp --CHHHHHHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSC---TTCEEEETTGGG
T ss_pred hhhHHHHhhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCC---CCcEEEEEeCCC
Confidence 10 012368889885 9999997533 3579999999997 788999998654
No 15
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.67 E-value=0.012 Score=63.01 Aligned_cols=174 Identities=20% Similarity=0.194 Sum_probs=121.4
Q ss_pred chhHhHHHHHHHHHHhhCCCeeeeeccCCCCcHH-H-HHHHHcC---C--CCee----------ecCCcchhHHHHHHHH
Q 008629 225 EYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF-E-LLAKYGT---T--HLVF----------NDDIQGTASVVLAGVV 287 (559)
Q Consensus 225 ~y~~~vdefv~av~~~fGp~~lIq~EDf~~~~Af-~-lL~ryr~---~--~~~F----------nDDiQGTaaV~LAgll 287 (559)
|-..+...|+.++.+.-||+.-|-=+|++..-.. . +.+.|+. . -.++ .|--.-||-=+..++-
T Consensus 130 El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~~~~~ 209 (424)
T 3k92_A 130 ELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGVTICIE 209 (424)
T ss_dssp HHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHHHHHHH
Confidence 4445788999999998899888888999874222 1 5567742 1 0122 2333457777888888
Q ss_pred HHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhc-hhhccccC
Q 008629 288 AALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK-KPWAHEHE 366 (559)
Q Consensus 288 ~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k-~~fA~~~~ 366 (559)
.+++..|.+|++.||+|-|.|..|...|++|.+. |. +-+.+.|++|-|++.. .|+... +.+.....
T Consensus 210 ~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~--GlD~~~l~~~~~~~g 276 (424)
T 3k92_A 210 EAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPD--GLDIPYLLDKRDSFG 276 (424)
T ss_dssp HHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTT--CCCHHHHHHHCCSSS
T ss_pred HHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHHHHhC
Confidence 8999999999999999999999999999999764 53 4567999999999764 343221 11111111
Q ss_pred -------CCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 008629 367 -------PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 417 (559)
Q Consensus 367 -------~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 417 (559)
..-+-.+. -.++.||||=+..+ +..|++-++.+ .-.+|.--+| |+
T Consensus 277 ~i~~~~a~~~~~~~i-~~~~~DIliPcA~~-n~I~~~~a~~l----~ak~V~EgAN~p~ 329 (424)
T 3k92_A 277 MVTNLFTDVITNEEL-LEKDCDILVPAAIS-NQITAKNAHNI----QASIVVERANGPT 329 (424)
T ss_dssp CCGGGCSCCBCHHHH-HHSCCSEEEECSCS-SCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred CCCCCCcEEecCccc-eeccccEEeecCcc-cccChhhHhhc----CceEEEcCCCCCC
Confidence 11123343 35689999988775 69999988776 5678888888 65
No 16
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.35 E-value=0.0094 Score=59.49 Aligned_cols=133 Identities=15% Similarity=0.165 Sum_probs=87.3
Q ss_pred CCCCeeecC------CcchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEE
Q 008629 266 TTHLVFNDD------IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL 339 (559)
Q Consensus 266 ~~~~~FnDD------iQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~l 339 (559)
..+.++|-. .-.+-+|+=.++..++...|..|.+.+++|+|+|..|..+|+.+.. .|. +++.
T Consensus 116 ~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~-----~G~-------~V~~ 183 (293)
T 3d4o_A 116 TNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAA-----LGA-------KVKV 183 (293)
T ss_dssp HTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEE
T ss_pred cCCeEEEecCCceeeeeccHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHh-----CCC-------EEEE
Confidence 467777743 2245556655666666777889999999999999999999998864 263 5888
Q ss_pred EcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CCC
Q 008629 340 VDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTS 418 (559)
Q Consensus 340 vD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~ 418 (559)
+|+.. .+ +...+..-++. -...+|.+.++. .|++|-... .+.++++.++.|. +..+|+=+|. |.
T Consensus 184 ~dr~~----~~---~~~~~~~g~~~-~~~~~l~~~l~~--aDvVi~~~p-~~~i~~~~l~~mk---~~~~lin~ar~~~- 248 (293)
T 3d4o_A 184 GARES----DL---LARIAEMGMEP-FHISKAAQELRD--VDVCINTIP-ALVVTANVLAEMP---SHTFVIDLASKPG- 248 (293)
T ss_dssp EESSH----HH---HHHHHHTTSEE-EEGGGHHHHTTT--CSEEEECCS-SCCBCHHHHHHSC---TTCEEEECSSTTC-
T ss_pred EECCH----HH---HHHHHHCCCee-cChhhHHHHhcC--CCEEEECCC-hHHhCHHHHHhcC---CCCEEEEecCCCC-
Confidence 88752 11 11111000010 011368888874 999997664 5799999999885 5678888884 43
Q ss_pred CCCCCHHHH
Q 008629 419 QSECTAEEA 427 (559)
Q Consensus 419 ~~EctpedA 427 (559)
++..+.+
T Consensus 249 --~~~~~~a 255 (293)
T 3d4o_A 249 --GTDFRYA 255 (293)
T ss_dssp --SBCHHHH
T ss_pred --CCCHHHH
Confidence 3445444
No 17
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=96.10 E-value=0.019 Score=59.66 Aligned_cols=218 Identities=17% Similarity=0.181 Sum_probs=119.9
Q ss_pred cchHHHHHhcCCCCCeeEEEEecCceecccCCCCCc--cccchhHHHHHHhHhcCC----CCCcchhHhHHHHHHHHHHh
Q 008629 167 KGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLALYTALGGI----RPSAEYAELLDEFMSAVKQN 240 (559)
Q Consensus 167 ~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~LY~a~gGI----~P~~~y~~~vdefv~av~~~ 240 (559)
+..++++.++ +.+|+|.++++...|+.|.... |..|..++-.++..|--| .|... .+-++.++.+++
T Consensus 20 P~~v~~L~~~----G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~~~adiil~v~~p~~~--~~~~~~i~~l~~- 92 (384)
T 1l7d_A 20 PEVVKKLVGL----GFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTA--EEGTDEVALIKE- 92 (384)
T ss_dssp HHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHHSSCSEEEEEECCCCG--GGSCCGGGGSCT-
T ss_pred HHHHHHHHhC----CCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhhcCCCEEEEecCcccc--cCCHHHHHhhcc-
Confidence 3445555442 5689999999999999998764 788887776666322111 12100 001222333221
Q ss_pred hCCCeeeeeccCCCCcHHHHHHHHc-CCCCeee----cCC-cc------hhHHHHH---HHHHHHHHhCC----------
Q 008629 241 YGEKVLIQFEDFANHNAFELLAKYG-TTHLVFN----DDI-QG------TASVVLA---GVVAALKLIGG---------- 295 (559)
Q Consensus 241 fGp~~lIq~EDf~~~~Af~lL~ryr-~~~~~Fn----DDi-QG------TaaV~LA---gll~Alr~~g~---------- 295 (559)
...+|-+=.... .-.+++.+. ..+.++| ++. .+ .....+| +++.+.+..++
T Consensus 93 --~~~~i~~~~~~~--~~~~~~~~~~~gi~~~~~e~~~~~~~~~~l~~l~~~a~~ag~~av~~~~~~~~~~~~~~~~~~~ 168 (384)
T 1l7d_A 93 --GAVLMCHLGALT--NRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDGAYEFARAFPMMMTAAG 168 (384)
T ss_dssp --TCEEEEECCGGG--CHHHHHHHHHTTCEEEEGGGCCCSGGGGGGCHHHHHHHHHHHHHHHHHHHHCSSCSSCEEETTE
T ss_pred --CCEEEEEecccC--CHHHHHHHHHCCCEEEEeccccccccccccchhhHHHHHHHHHHHHHHHHHhhhcccchhccCC
Confidence 122232222211 123445553 4566664 111 11 1111223 45566665553
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhch----------------
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK---------------- 359 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~---------------- 359 (559)
.+...+++|+|+|.+|.+++..+.. .|. +++++|++.- |.+.+..+-.
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~~~d~~~~----~~~~~~~~Ga~~~~i~~~~~~~~~~~ 232 (384)
T 1l7d_A 169 TVPPARVLVFGVGVAGLQAIATAKR-----LGA-------VVMATDVRAA----TKEQVESLGGKFITVDDEAMKTAETA 232 (384)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCST----THHHHHHTTCEECCC-----------
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCCHH----HHHHHHHcCCeEEeeccccccccccc
Confidence 6788999999999999999988764 363 3888987532 1100100000
Q ss_pred -hhccccCC------CCCHHHHhcccCCcEEEeccCC-----CCCCCHHHHHHHHcCCCCcEEEecCCC
Q 008629 360 -PWAHEHEP------VNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMASFNEKPLILALSNP 416 (559)
Q Consensus 360 -~fA~~~~~------~~~L~e~V~~vkPtvLIG~S~~-----~g~Ft~evv~~Ma~~~erPIIFaLSNP 416 (559)
.|++...+ ...|.+.++. .|++|.++.. +.+++++.++.|. +..+|+-+|.+
T Consensus 233 ~~~~~~~s~~~~~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~mk---~g~vivdva~~ 296 (384)
T 1l7d_A 233 GGYAKEMGEEFRKKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMK---PGSVIIDLAVE 296 (384)
T ss_dssp ------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSC---TTCEEEETTGG
T ss_pred ccchhhcCHHHHhhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC---CCCEEEEEecC
Confidence 11111000 0127777774 9999998832 3468999999996 67889988864
No 18
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.07 E-value=0.12 Score=55.73 Aligned_cols=195 Identities=16% Similarity=0.112 Sum_probs=128.2
Q ss_pred hHHHHHHhHh-c---------CC--CCCc----chhHhHHHHHHHHHHhhCCCeeeeeccCCCCcHH--HHHHHH---cC
Q 008629 208 VGKLALYTAL-G---------GI--RPSA----EYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKY---GT 266 (559)
Q Consensus 208 iGKl~LY~a~-g---------GI--~P~~----~y~~~vdefv~av~~~fGp~~lIq~EDf~~~~Af--~lL~ry---r~ 266 (559)
.+..+-||.+ + || ||.. +-..|...||..+.+..||+.=|--.|++..-.- -+.+.| +.
T Consensus 112 La~~mT~KnAl~gLP~GGgKggi~~DPk~~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~ 191 (450)
T 4fcc_A 112 LGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSN 191 (450)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEEESCCCTTCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCCCceEEecCCCcCCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccC
Confidence 4666777753 2 33 4543 5666788889998889999999999999754321 133444 33
Q ss_pred C-CCee----------ecCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcc
Q 008629 267 T-HLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 335 (559)
Q Consensus 267 ~-~~~F----------nDDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~ 335 (559)
. -.|| .+.-.-||-=+.-++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +
T Consensus 192 ~~~~v~TGk~~~~GGs~~r~~aTg~Gv~~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~-----Ga------k 260 (450)
T 4fcc_A 192 NTACVFTGKGLSFGGSLIRPEATGYGLVYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEF-----GA------R 260 (450)
T ss_dssp CCSCCCSSCCGGGTCCTTTTTHHHHHHHHHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------E
T ss_pred CCceeecCCCcccCCCCCCCCceeeeHHHHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhc-----CC------e
Confidence 2 2233 12223377667777888899999999999999999999999999998763 63 5
Q ss_pred cEEEEcccCccccCCcCCCchhchhhccc--cCCCCCHHH-------------HhcccCCcEEEeccCCCCCCCHHHHHH
Q 008629 336 KICLVDSKGLIVSSRKDSLQHFKKPWAHE--HEPVNNLLD-------------AVKVIKPTILIGSSGVGRTFTKEVIEA 400 (559)
Q Consensus 336 ~i~lvD~~GLi~~~R~~~l~~~k~~fA~~--~~~~~~L~e-------------~V~~vkPtvLIG~S~~~g~Ft~evv~~ 400 (559)
=+-+-|++|-|++.. .++..+.....+ ......+.+ -+-.++.|||+=+..+ +.+|++-++.
T Consensus 261 vVavsD~~G~i~d~~--Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl~-~~I~~~~a~~ 337 (450)
T 4fcc_A 261 VITASDSSGTVVDES--GFTKEKLARLIEIKSSRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQ-NELDVDAAHQ 337 (450)
T ss_dssp EEEEEETTEEEECTT--CCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSCT-TCBCHHHHHH
T ss_pred EEEEecCCceEEeCC--CCCHHHHHHHHHHhcccCCccccccccCCcEEecCcccccCCccEEeecccc-ccccHHHHHH
Confidence 567788999888653 344332211110 000011111 1234689999988774 6999999999
Q ss_pred HHcCCCCcEEEecCC-CC
Q 008629 401 MASFNEKPLILALSN-PT 417 (559)
Q Consensus 401 Ma~~~erPIIFaLSN-Pt 417 (559)
+.+. --.+|.-=+| |+
T Consensus 338 L~a~-g~k~IaEgAN~p~ 354 (450)
T 4fcc_A 338 LIAN-GVKAVAEGANMPT 354 (450)
T ss_dssp HHHT-TCCEEECCSSSCB
T ss_pred HHhc-CceEEecCCCCCC
Confidence 8632 2357777777 55
No 19
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.05 E-value=0.033 Score=59.44 Aligned_cols=174 Identities=13% Similarity=0.129 Sum_probs=118.1
Q ss_pred chhHhHHHHHHHHHHhhCCCeeeeeccCCCCcH--HHHHHHHcC---C--CCee----------ecCCcchhHHHHHHHH
Q 008629 225 EYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYGT---T--HLVF----------NDDIQGTASVVLAGVV 287 (559)
Q Consensus 225 ~y~~~vdefv~av~~~fGp~~lIq~EDf~~~~A--f~lL~ryr~---~--~~~F----------nDDiQGTaaV~LAgll 287 (559)
|-..+...|+.++.+.-||+.-|-=+|++..-. --+.+.|+. . -.++ .+.-.-||-=+.-++-
T Consensus 127 El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~~~~~ 206 (419)
T 3aoe_E 127 ELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGALLVLE 206 (419)
T ss_dssp HHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHHHHHH
Confidence 445678889999999888999999999987532 125666632 1 0122 2222346656666777
Q ss_pred HHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEE-EEcccCccccCCcCCCchhch-hhcccc
Q 008629 288 AALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHFKK-PWAHEH 365 (559)
Q Consensus 288 ~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~-lvD~~GLi~~~R~~~l~~~k~-~fA~~~ 365 (559)
.+++..|.+|++.||+|-|.|..|...|++|.+ .|. +++ +.|++|-|++.. .|+..+. .+....
T Consensus 207 ~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~-----~Ga-------kVVavsD~~G~i~dp~--Gld~~~l~~~~~~~ 272 (419)
T 3aoe_E 207 ALAKRRGLDLRGARVVVQGLGQVGAAVALHAER-----LGM-------RVVAVATSMGGMYAPE--GLDVAEVLSAYEAT 272 (419)
T ss_dssp HHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEEETTEEEECTT--CCCHHHHHHHHHHH
T ss_pred HHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEEcCCCeEECCC--CCCHHHHHHHHHhh
Confidence 888889999999999999999999999998875 363 455 999999998764 3432211 111111
Q ss_pred CCCC----CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CCC
Q 008629 366 EPVN----NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTS 418 (559)
Q Consensus 366 ~~~~----~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~ 418 (559)
.... +-.+ +-.++.|||+=++. ++.+|++-.+.+ .-.||.--+| |++
T Consensus 273 g~v~~~~~~~~e-~~~~~~DVliP~A~-~n~i~~~~A~~l----~ak~V~EgAN~p~t 324 (419)
T 3aoe_E 273 GSLPRLDLAPEE-VFGLEAEVLVLAAR-EGALDGDRARQV----QAQAVVEVANFGLN 324 (419)
T ss_dssp SSCSCCCBCTTT-GGGSSCSEEEECSC-TTCBCHHHHTTC----CCSEEEECSTTCBC
T ss_pred CCcceeeccchh-hhccCceEEEeccc-ccccccchHhhC----CceEEEECCCCcCC
Confidence 1010 0112 34578999998876 669999988877 4579998998 653
No 20
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.91 E-value=0.017 Score=59.32 Aligned_cols=96 Identities=17% Similarity=0.231 Sum_probs=78.0
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCc
Q 008629 277 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 355 (559)
Q Consensus 277 GTaaV~LAgll~Alr~~g~~l~d~riv~~GAG-sAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~ 355 (559)
+-.-+|-.|++-.++..+.+++..++||+|+| ..|.-+|.++... | ..+.+++++
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 198 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK------------ 198 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT------------
T ss_pred CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC------------
Confidence 45567889999999999999999999999999 5799999888652 4 357888643
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 008629 356 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 416 (559)
Q Consensus 356 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNP 416 (559)
..+|.+.++. +|++|+..+.++.+++++|+ +.-+|+=++-|
T Consensus 199 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 239 (301)
T 1a4i_A 199 ------------TAHLDEEVNK--GDILVVATGQPEMVKGEWIK------PGAIVIDCGIN 239 (301)
T ss_dssp ------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCCB
T ss_pred ------------cccHHHHhcc--CCEEEECCCCcccCCHHHcC------CCcEEEEccCC
Confidence 1468889986 99999999999999999985 45577766654
No 21
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.72 E-value=0.025 Score=57.56 Aligned_cols=94 Identities=18% Similarity=0.267 Sum_probs=74.0
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCc
Q 008629 277 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 355 (559)
Q Consensus 277 GTaaV~LAgll~Alr~~g~~l~d~riv~~GAGs-AgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~ 355 (559)
+-.-+|-.|++-.++..+.+|+..++|++|+|. .|..+|.+|... |. .+.+++++
T Consensus 139 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~------------ 194 (285)
T 3l07_A 139 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-----KA-------TVTTCHRF------------ 194 (285)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT------------
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC------------
Confidence 344678889999999999999999999999986 899999988752 53 46777542
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 008629 356 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 356 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 414 (559)
..+|.+.++. +|++|...+.++.++.++|+ +.-+|+=++
T Consensus 195 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 233 (285)
T 3l07_A 195 ------------TTDLKSHTTK--ADILIVAVGKPNFITADMVK------EGAVVIDVG 233 (285)
T ss_dssp ------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECC
T ss_pred ------------chhHHHhccc--CCEEEECCCCCCCCCHHHcC------CCcEEEEec
Confidence 1368889986 99999999999999998884 444555443
No 22
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=95.70 E-value=0.29 Score=52.80 Aligned_cols=186 Identities=16% Similarity=0.163 Sum_probs=122.2
Q ss_pred chhHhHHHHHHHHHHhhCCCeeeeeccCCCCcHH--HHHHHHc---CCCC-ee----------ecCCcchhHHHHHHHHH
Q 008629 225 EYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYG---TTHL-VF----------NDDIQGTASVVLAGVVA 288 (559)
Q Consensus 225 ~y~~~vdefv~av~~~fGp~~lIq~EDf~~~~Af--~lL~ryr---~~~~-~F----------nDDiQGTaaV~LAgll~ 288 (559)
+...|-..||..+.+.+||+.=|-=+|++..-.. -+.+.|+ ...+ |+ ..--.-||-=+.-++-.
T Consensus 149 el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~~~~~ 228 (456)
T 3r3j_A 149 EILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVYFAEN 228 (456)
T ss_dssp HHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHHHHHH
Confidence 4555666788888888899988999999864322 1456664 2221 11 11122456566667777
Q ss_pred HHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchh--------
Q 008629 289 ALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-------- 360 (559)
Q Consensus 289 Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~-------- 360 (559)
+++..|.+|++.||+|-|.|..|...|+.|.+. |. +-+.+.|++|-|++.. .|+..+..
T Consensus 229 ~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~--Gld~~~l~~~~~~k~~ 295 (456)
T 3r3j_A 229 VLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN--GFTKEQLNYIMDIKNN 295 (456)
T ss_dssp HHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT--CCCHHHHHHHHHHHHT
T ss_pred HHHHcCCCccCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHHHHHHh
Confidence 888889999999999999999999999998764 53 3455899999888754 34322211
Q ss_pred -------hccccCCCC--CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CCCCCCCCHHHHhc
Q 008629 361 -------WAHEHEPVN--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEEAYT 429 (559)
Q Consensus 361 -------fA~~~~~~~--~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~~EctpedA~~ 429 (559)
|+...+... +-.+ +-.++.||||=+.. ++.+|++-++.+-+. .-+||.--+| |++ +| +++.+.
T Consensus 296 ~~~~v~~~~~~~~~a~~v~~~~-i~~~~~DI~iPcA~-~~~I~~~na~~l~~~-~ak~V~EgAN~p~T-~e--A~~iL~ 368 (456)
T 3r3j_A 296 QRLRLKEYLKYSKTAKYFENQK-PWNIPCDIAFPCAT-QNEINENDADLFIQN-KCKMIVEGANMPTH-IK--ALHKLK 368 (456)
T ss_dssp SCCCGGGGGGTCSSCEEECSCC-GGGSCCSEEEECSC-TTCBCHHHHHHHHHH-TCCEEECCSSSCBC-TT--HHHHHH
T ss_pred cCcchhhhhhcCCCceEeCCcc-ccccCccEEEeCCC-ccchhhHHHHHHHhc-CCeEEEecCCCCCC-HH--HHHHHH
Confidence 111001000 1112 23467999998877 679999999998432 4689998998 664 44 556654
No 23
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=95.63 E-value=0.021 Score=57.38 Aligned_cols=88 Identities=15% Similarity=0.199 Sum_probs=59.4
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhc
Q 008629 283 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 362 (559)
Q Consensus 283 LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA 362 (559)
-.|++.+++..+..+++.+++|+|||.+|.+++..|.. .|. ++|+++|+. .+| .....+.+.
T Consensus 111 ~~G~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~----~~~---a~~la~~~~ 172 (283)
T 3jyo_A 111 VSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLD----TSR---AQALADVIN 172 (283)
T ss_dssp HHHHHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSS----HHH---HHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECC----HHH---HHHHHHHHH
Confidence 45788899888889999999999999777777766654 365 679988774 222 121212221
Q ss_pred cc-------cCCCCCHHHHhcccCCcEEEeccCCC
Q 008629 363 HE-------HEPVNNLLDAVKVIKPTILIGSSGVG 390 (559)
Q Consensus 363 ~~-------~~~~~~L~e~V~~vkPtvLIG~S~~~ 390 (559)
.. .-+..+|.++++. +|++|-++..|
T Consensus 173 ~~~~~~~i~~~~~~~l~~~l~~--~DiVInaTp~G 205 (283)
T 3jyo_A 173 NAVGREAVVGVDARGIEDVIAA--ADGVVNATPMG 205 (283)
T ss_dssp HHHTSCCEEEECSTTHHHHHHH--SSEEEECSSTT
T ss_pred hhcCCceEEEcCHHHHHHHHhc--CCEEEECCCCC
Confidence 11 1123478888876 89999887754
No 24
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=95.38 E-value=0.086 Score=56.27 Aligned_cols=174 Identities=14% Similarity=0.166 Sum_probs=105.6
Q ss_pred chhHhHHHHHHHHHHhhCCCeeeeeccCCCCcH--HHHHHHHcC---CC---Ceee----------cCCcchhHHHHHHH
Q 008629 225 EYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYGT---TH---LVFN----------DDIQGTASVVLAGV 286 (559)
Q Consensus 225 ~y~~~vdefv~av~~~fGp~~lIq~EDf~~~~A--f~lL~ryr~---~~---~~Fn----------DDiQGTaaV~LAgl 286 (559)
|-..+...|+.++.+.-||+.-|-=+|++..-. --+.+.|+. .. .++- +.-.-||-=+.-++
T Consensus 120 el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~~~~ 199 (421)
T 2yfq_A 120 ELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGVAVVV 199 (421)
T ss_dssp HHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHHHHHH
Confidence 445678899999999889999999999997522 125666642 11 2221 12233555555567
Q ss_pred HHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc-----CccccCCcCCCchhch-h
Q 008629 287 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK-----GLIVSSRKDSLQHFKK-P 360 (559)
Q Consensus 287 l~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~-----GLi~~~R~~~l~~~k~-~ 360 (559)
-.+++..|.+|++.||+|.|.|..|...|++|.+ .|. +=+-+.|++ |-|++.. .|+.... .
T Consensus 200 ~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~-----~Ga------kvVavsD~~~~~~~G~i~d~~--Gld~~~l~~ 266 (421)
T 2yfq_A 200 RESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIER-----QGG------KVCAIAEWDRNEGNYALYNEN--GIDFKELLA 266 (421)
T ss_dssp HHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHH-----TTC------CEEECCBCCSSSCSBCCBCSS--CCCHHHHHH
T ss_pred HHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CCC------EEEEEEecCCCccceEEECCC--CCCHHHHHH
Confidence 7788889999999999999999999999998876 363 334489999 9999764 3432211 1
Q ss_pred hccccCCCC--------CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 008629 361 WAHEHEPVN--------NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 417 (559)
Q Consensus 361 fA~~~~~~~--------~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 417 (559)
+......+. +-.+ +-.++.||||=++. ++.+|++-.+.+ .-.+|.--+| |+
T Consensus 267 ~~~~~g~i~~~~~a~~i~~~~-~~~~~~DIliP~A~-~n~i~~~~A~~l----~ak~VvEgAN~P~ 326 (421)
T 2yfq_A 267 YKEANKTLIGFPGAERITDEE-FWTKEYDIIVPAAL-ENVITGERAKTI----NAKLVCEAANGPT 326 (421)
T ss_dssp HHHHHCC----------------------CEEECSC-SSCSCHHHHTTC----CCSEEECCSSSCS
T ss_pred HHHhcCCcccCCCceEeCccc-hhcCCccEEEEcCC-cCcCCcccHHHc----CCeEEEeCCcccc
Confidence 111111100 1112 23356777776654 457777766655 3456666666 44
No 25
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.34 E-value=0.041 Score=55.97 Aligned_cols=96 Identities=17% Similarity=0.256 Sum_probs=76.3
Q ss_pred hhHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCch
Q 008629 278 TASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 356 (559)
Q Consensus 278 TaaV~LAgll~Alr~~g~~l~d~riv~~GAGs-AgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~ 356 (559)
-.-+|-.|++..++..+.+|+..++|++|+|. .|..+|.+|... |. .+.+++++
T Consensus 139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~-----gA-------tVtv~h~~------------- 193 (285)
T 3p2o_A 139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-----GA-------TVSVCHIK------------- 193 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 45688899999999999999999999999876 899999998752 53 47777652
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecC-CCC
Q 008629 357 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS-NPT 417 (559)
Q Consensus 357 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS-NPt 417 (559)
..+|.+.++. +|++|...+.++.++.++|+ +.-+|+=++ ||.
T Consensus 194 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~~~ 236 (285)
T 3p2o_A 194 -----------TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK------EGVIVVDVGINRL 236 (285)
T ss_dssp -----------CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC------TTEEEEECCCEEC
T ss_pred -----------chhHHHHhhc--CCEEEECCCCCCcCCHHHcC------CCeEEEEeccCcc
Confidence 1368888986 99999999999999999884 455666553 443
No 26
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=95.31 E-value=0.21 Score=54.07 Aligned_cols=177 Identities=15% Similarity=0.148 Sum_probs=115.1
Q ss_pred chhHhHHHHHHHHHHhhCCCeeeeeccCCCCcHH--HHHHHHcC--CC--Cee----------ecCCcchhHHHHHHHHH
Q 008629 225 EYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYGT--TH--LVF----------NDDIQGTASVVLAGVVA 288 (559)
Q Consensus 225 ~y~~~vdefv~av~~~fGp~~lIq~EDf~~~~Af--~lL~ryr~--~~--~~F----------nDDiQGTaaV~LAgll~ 288 (559)
+...|-..||..+.+..||+.=|-=+|++..-.. -+.+.|+. .. .|+ .++-.-||-=+.-++-.
T Consensus 162 El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~~~~ 241 (470)
T 2bma_A 162 EILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYFVLE 241 (470)
T ss_dssp HHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHHHHH
Confidence 4445666788888877899988889999874221 25566642 11 111 11223355555566777
Q ss_pred HHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchh--------c--
Q 008629 289 ALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF--------K-- 358 (559)
Q Consensus 289 Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~--------k-- 358 (559)
+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+-+.|++|-|++.. .++.. |
T Consensus 242 ~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~--Gid~edl~~l~~~k~~ 308 (470)
T 2bma_A 242 VLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHL-----NV------KVLTLSDSNGYVYEPN--GFTHENLEFLIDLKEE 308 (470)
T ss_dssp HHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHT-----TC------EECEEEETTEEEECSS--CCCHHHHHHHHHHHTT
T ss_pred HHHhccCCcCCCEEEEECCcHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC--CCCHHHHHHHHHHHHh
Confidence 888889999999999999999999999998763 63 3333888888887653 34222 1
Q ss_pred -----hhhccccCCC--CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 008629 359 -----KPWAHEHEPV--NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 417 (559)
Q Consensus 359 -----~~fA~~~~~~--~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 417 (559)
..|+...+.. -+-.+.. .++.||||=+.. ++..|++-++.+-+ +.-.+|.--+| |+
T Consensus 309 ~~g~v~~~~~~~~~a~~v~~~~~~-~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~ 372 (470)
T 2bma_A 309 KKGRIKEYLNHSSTAKYFPNEKPW-GVPCTLAFPCAT-QNDVDLDQAKLLQK-NGCILVGEGANMPS 372 (470)
T ss_dssp TTCCGGGGGGTCSSCEECSSCCTT-SSCCSEEEECSS-TTCBCSHHHHHHHH-TTCCEEECCSSSCB
T ss_pred cCCcHHHHHhhcCCcEEecCcCee-ecCccEEEeccc-cCcCCHHHHHHHHh-cCcEEEEeCCCCCC
Confidence 1222110000 0001222 468999998885 67999999999854 35678988888 65
No 27
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.24 E-value=0.075 Score=52.71 Aligned_cols=121 Identities=17% Similarity=0.247 Sum_probs=75.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 378 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 378 (559)
..||.|+|+|..|.++|..+... |.. ..+++++|++ .+ .+...++.|- .....++.|+++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-----g~~----~~~V~v~dr~----~~---~~~~l~~~~g--i~~~~~~~~~~~~- 63 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-----GYD----PNRICVTNRS----LD---KLDFFKEKCG--VHTTQDNRQGALN- 63 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-----TCC----GGGEEEECSS----SH---HHHHHHHTTC--CEEESCHHHHHSS-
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-----CCC----CCeEEEEeCC----HH---HHHHHHHHcC--CEEeCChHHHHhc-
Confidence 46899999999999999988763 652 2478888874 11 1222222221 1112578898885
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcC--CCCcEEEecCCCCCCCCCCHHHHhcccCC--cEEEeeCCCCCCcee
Q 008629 379 KPTILIGSSGVGRTFTKEVIEAMASF--NEKPLILALSNPTSQSECTAEEAYTWSKG--RAIFASGSPFDPFEY 448 (559)
Q Consensus 379 kPtvLIG~S~~~g~Ft~evv~~Ma~~--~erPIIFaLSNPt~~~EctpedA~~wt~G--~aifAsGSPF~pv~~ 448 (559)
+|++| ++..+ -..+++++.+..+ .++.+|...++..+ .++.-+|... +++-+ -|+.|...
T Consensus 64 -aDvVi-lav~p-~~~~~vl~~l~~~~l~~~~iiiS~~agi~-----~~~l~~~l~~~~~vvr~--mPn~p~~v 127 (280)
T 3tri_A 64 -ADVVV-LAVKP-HQIKMVCEELKDILSETKILVISLAVGVT-----TPLIEKWLGKASRIVRA--MPNTPSSV 127 (280)
T ss_dssp -CSEEE-ECSCG-GGHHHHHHHHHHHHHTTTCEEEECCTTCC-----HHHHHHHHTCCSSEEEE--ECCGGGGG
T ss_pred -CCeEE-EEeCH-HHHHHHHHHHHhhccCCCeEEEEecCCCC-----HHHHHHHcCCCCeEEEE--ecCChHHh
Confidence 88877 44444 4568888888764 56668888888774 3444455432 33322 36555543
No 28
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.21 E-value=0.041 Score=55.75 Aligned_cols=83 Identities=11% Similarity=0.210 Sum_probs=68.3
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCc
Q 008629 277 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 355 (559)
Q Consensus 277 GTaaV~LAgll~Alr~~g~~l~d~riv~~GAGs-AgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~ 355 (559)
+-.-+|-.|++..++..+ |+..++|++|+|. .|..+|.++... |. .+++++++
T Consensus 130 ~~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~-----gA-------tVtv~~~~------------ 183 (276)
T 3ngx_A 130 FLVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNR-----NY-------TVSVCHSK------------ 183 (276)
T ss_dssp SSCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT------------
T ss_pred CCCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHC-----CC-------eEEEEeCC------------
Confidence 445688899999999998 9999999999984 899999998752 53 47777652
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHH
Q 008629 356 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIE 399 (559)
Q Consensus 356 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~ 399 (559)
..+|.+.++. +|++|...+.++.+++++++
T Consensus 184 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 213 (276)
T 3ngx_A 184 ------------TKDIGSMTRS--SKIVVVAVGRPGFLNREMVT 213 (276)
T ss_dssp ------------CSCHHHHHHH--SSEEEECSSCTTCBCGGGCC
T ss_pred ------------cccHHHhhcc--CCEEEECCCCCccccHhhcc
Confidence 1468899987 99999999999999988873
No 29
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.18 E-value=0.036 Score=56.54 Aligned_cols=96 Identities=16% Similarity=0.166 Sum_probs=76.6
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCc
Q 008629 277 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 355 (559)
Q Consensus 277 GTaaV~LAgll~Alr~~g~~l~d~riv~~GAGs-AgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~ 355 (559)
+-.-+|-.|++-.++..+.+++..++|++|+|. .|.-+|.++.. .| ..+++++++
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~-----~g-------AtVtv~hs~------------ 192 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLL-----AG-------CTTTVTHRF------------ 192 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHT-----TT-------CEEEEECSS------------
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHH-----CC-------CeEEEEeCC------------
Confidence 556788899999999999999999999999995 69999888765 24 357777632
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 008629 356 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 416 (559)
Q Consensus 356 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNP 416 (559)
..+|.+.++. +|++|+..+.++.+++++|+ +.-+|+=++-|
T Consensus 193 ------------t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk------~GavVIDVgi~ 233 (288)
T 1b0a_A 193 ------------TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK------EGAIVIDVGIN 233 (288)
T ss_dssp ------------CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC------TTCEEEECCCE
T ss_pred ------------chhHHHHhcc--CCEEEECCCCcCcCCHHHcC------CCcEEEEccCC
Confidence 0468889986 99999999999999998874 44566655544
No 30
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.12 E-value=0.029 Score=57.90 Aligned_cols=114 Identities=19% Similarity=0.249 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHH---------hCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccC
Q 008629 280 SVVLAGVVAALKL---------IGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS 349 (559)
Q Consensus 280 aV~LAgll~Alr~---------~g~~l~d~riv~~GAGs-AgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~ 349 (559)
-+|-.|.+-.++- .|.++...++|++|+|. .|.-+|.++.. .| .+++++|+...-...
T Consensus 149 PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~-----~g-------AtVtv~nR~~~~l~~ 216 (320)
T 1edz_A 149 PCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLAN-----DG-------ATVYSVDVNNIQKFT 216 (320)
T ss_dssp CHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHT-----TS-------CEEEEECSSEEEEEE
T ss_pred CCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHH-----CC-------CEEEEEeCchHHHHh
Confidence 3444555666666 68899999999999995 59888888864 24 358899987665555
Q ss_pred CcCCCchhchhhccccCC---C--CCHHHHhcccCCcEEEeccCCCCC-CCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 350 RKDSLQHFKKPWAHEHEP---V--NNLLDAVKVIKPTILIGSSGVGRT-FTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 350 R~~~l~~~k~~fA~~~~~---~--~~L~e~V~~vkPtvLIG~S~~~g~-Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
|.+.+... ++.... . .+|.+.++. +|++|+..+.++. ++.++|+ +.-+|+=++.|-
T Consensus 217 ra~~la~~----~~~~t~~~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk------~GavVIDVgi~r 278 (320)
T 1edz_A 217 RGESLKLN----KHHVEDLGEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK------EGAVCINFACTK 278 (320)
T ss_dssp SCCCSSCC----CCEEEEEEECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC------TTEEEEECSSSC
T ss_pred HHHHHhhh----cccccccccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC------CCeEEEEcCCCc
Confidence 54434311 121100 1 469999997 9999999999887 8998874 334666666654
No 31
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.09 E-value=0.19 Score=53.98 Aligned_cols=175 Identities=17% Similarity=0.164 Sum_probs=116.1
Q ss_pred chhHhHHHHHHHHHHhhCCCeeeeeccCCCCcHHH---HHHHHcC---C--CCee----------ecCCcchhHHHHHHH
Q 008629 225 EYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYGT---T--HLVF----------NDDIQGTASVVLAGV 286 (559)
Q Consensus 225 ~y~~~vdefv~av~~~fGp~~lIq~EDf~~~~Af~---lL~ryr~---~--~~~F----------nDDiQGTaaV~LAgl 286 (559)
|-..+...|+.++.+.-||+.-|-=+|++.. ... +.+.|+. . -.++ .+.-.-||-=+.-++
T Consensus 144 Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~-~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~~~~ 222 (440)
T 3aog_A 144 ELERLTRRYTSEIGILLGPDRDIPAPDVNTG-EREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVFITA 222 (440)
T ss_dssp HHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEECCCCCCC-HHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHHHHHH
Confidence 4456788899999998889888989999874 222 5666632 1 1222 222234555556667
Q ss_pred HHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCC---Cchhchhhcc
Q 008629 287 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS---LQHFKKPWAH 363 (559)
Q Consensus 287 l~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~---l~~~k~~fA~ 363 (559)
-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +=+-+.|++|-|++..+=+ |..++..+-.
T Consensus 223 ~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~-----Ga------kvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~ 291 (440)
T 3aog_A 223 AAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDH-----GA------RVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGG 291 (440)
T ss_dssp HHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECTTCCCHHHHHHHHHHTSS
T ss_pred HHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHC-----CC------EEEEEEcCCcEEECCCCCCHHHHHHHHHhcCC
Confidence 77888899999999999999999999999988763 63 3344999999998765311 2222222110
Q ss_pred --c--cCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 008629 364 --E--HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 417 (559)
Q Consensus 364 --~--~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 417 (559)
+ ....-+-.+ +-.++.||||=++. ++.+|.+-++.+ .-.+|.--+| |+
T Consensus 292 i~~y~~a~~i~~~e-i~~~~~DIlvPcA~-~n~i~~~na~~l----~ak~VvEgAN~p~ 344 (440)
T 3aog_A 292 VRGYPKAEPLPAAD-FWGLPVEFLVPAAL-EKQITEQNAWRI----RARIVAEGANGPT 344 (440)
T ss_dssp STTCTTSEECCHHH-HTTCCCSEEEECSS-SSCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred cccCCCceEcCchh-hhcCCCcEEEecCC-cCccchhhHHHc----CCcEEEecCcccc
Confidence 0 000012334 34578999997766 568888887776 4677877777 65
No 32
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=95.06 E-value=0.14 Score=53.57 Aligned_cols=102 Identities=16% Similarity=0.323 Sum_probs=62.9
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHh
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 375 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V 375 (559)
++.+.+++|+|+|..|..++..+... |. ++|+++|+. ..| .....+.|--+.-...++.+.+
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~-----G~------~~V~v~~r~----~~r---a~~la~~~g~~~~~~~~l~~~l 225 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDR-----GV------RAVLVANRT----YER---AVELARDLGGEAVRFDELVDHL 225 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHH-----CC------SEEEEECSS----HHH---HHHHHHHHTCEECCGGGHHHHH
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHC-----CC------CEEEEEeCC----HHH---HHHHHHHcCCceecHHhHHHHh
Confidence 57889999999999999998887653 64 578888874 111 1111111210111123677877
Q ss_pred cccCCcEEEeccCCC-CCCCHHHHHH--HH-cCCCCcEEEecCCCC
Q 008629 376 KVIKPTILIGSSGVG-RTFTKEVIEA--MA-SFNEKPLILALSNPT 417 (559)
Q Consensus 376 ~~vkPtvLIG~S~~~-g~Ft~evv~~--Ma-~~~erPIIFaLSNPt 417 (559)
+ +.|++|-+++.+ ..++++.++. |. +...+-+++-++.|.
T Consensus 226 ~--~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~ 269 (404)
T 1gpj_A 226 A--RSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR 269 (404)
T ss_dssp H--TCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred c--CCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCC
Confidence 6 489999887654 3567888887 43 222334555566553
No 33
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.04 E-value=0.053 Score=55.22 Aligned_cols=97 Identities=18% Similarity=0.239 Sum_probs=75.5
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCc
Q 008629 277 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 355 (559)
Q Consensus 277 GTaaV~LAgll~Alr~~g~~l~d~riv~~GAGs-AgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~ 355 (559)
+-.-+|-.|++..++-.+.+|+..++|++|+|. .|..+|.+|... |. .+.+++++ .
T Consensus 139 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~-----gA-------tVtv~hs~-------T---- 195 (286)
T 4a5o_A 139 LLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLG-----GC-------TVTVTHRF-------T---- 195 (286)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHT-----TC-------EEEEECTT-------C----
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC-------C----
Confidence 344678889999999999999999999999875 899999998752 53 46666542 1
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEec-CCCC
Q 008629 356 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILAL-SNPT 417 (559)
Q Consensus 356 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaL-SNPt 417 (559)
.+|.+.++. +|++|+..+.++.++.++|+ +.-+|+=+ +||.
T Consensus 196 -------------~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvgi~~~ 237 (286)
T 4a5o_A 196 -------------RDLADHVSR--ADLVVVAAGKPGLVKGEWIK------EGAIVIDVGINRQ 237 (286)
T ss_dssp -------------SCHHHHHHT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCSCSS
T ss_pred -------------cCHHHHhcc--CCEEEECCCCCCCCCHHHcC------CCeEEEEeccccc
Confidence 368888986 99999999999999998884 44566655 3554
No 34
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=94.97 E-value=0.027 Score=56.61 Aligned_cols=86 Identities=22% Similarity=0.246 Sum_probs=56.1
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhc
Q 008629 283 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 362 (559)
Q Consensus 283 LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA 362 (559)
-.|++.+++..+.++++.+++|+|||.+|.+++..|.. .|. ++++++++. .++.+.+.. .+.
T Consensus 101 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~----~~~a~~la~---~~~ 162 (277)
T 3don_A 101 GIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYK-----IVR------PTLTVANRT----MSRFNNWSL---NIN 162 (277)
T ss_dssp HHHHHHHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC----GGGGTTCCS---CCE
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHHHHHHHH---hcc
Confidence 34677888888999999999999999888888777754 365 578888875 222222321 111
Q ss_pred cccCCCCCHHHHhcccCCcEEEeccCCC
Q 008629 363 HEHEPVNNLLDAVKVIKPTILIGSSGVG 390 (559)
Q Consensus 363 ~~~~~~~~L~e~V~~vkPtvLIG~S~~~ 390 (559)
. ....++.++++. +|++|-++..|
T Consensus 163 ~--~~~~~~~~~~~~--aDiVInaTp~G 186 (277)
T 3don_A 163 K--INLSHAESHLDE--FDIIINTTPAG 186 (277)
T ss_dssp E--ECHHHHHHTGGG--CSEEEECCC--
T ss_pred c--ccHhhHHHHhcC--CCEEEECccCC
Confidence 0 112346666664 89999776654
No 35
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.92 E-value=0.015 Score=51.50 Aligned_cols=88 Identities=16% Similarity=0.228 Sum_probs=50.7
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCch
Q 008629 277 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 356 (559)
Q Consensus 277 GTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~ 356 (559)
|..+|+.+++-.+-+.. ..||+|+|+|..|..++..+.. .|. + ++++|+. .++ ...
T Consensus 4 ~~~sv~~~a~~~~~~~~-----~~~v~iiG~G~iG~~~a~~l~~-----~g~------~-v~v~~r~----~~~---~~~ 59 (144)
T 3oj0_A 4 GKVSIPSIVYDIVRKNG-----GNKILLVGNGMLASEIAPYFSY-----PQY------K-VTVAGRN----IDH---VRA 59 (144)
T ss_dssp CCCSHHHHHHHHHHHHC-----CCEEEEECCSHHHHHHGGGCCT-----TTC------E-EEEEESC----HHH---HHH
T ss_pred CcccHHHHHHHHHHhcc-----CCEEEEECCCHHHHHHHHHHHh-----CCC------E-EEEEcCC----HHH---HHH
Confidence 44455555543333322 7899999999999888776643 243 4 8888864 111 222
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEeccCCC
Q 008629 357 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVG 390 (559)
Q Consensus 357 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~ 390 (559)
..+.|.-+.....++.++++. .|++|-+++.+
T Consensus 60 ~a~~~~~~~~~~~~~~~~~~~--~Divi~at~~~ 91 (144)
T 3oj0_A 60 FAEKYEYEYVLINDIDSLIKN--NDVIITATSSK 91 (144)
T ss_dssp HHHHHTCEEEECSCHHHHHHT--CSEEEECSCCS
T ss_pred HHHHhCCceEeecCHHHHhcC--CCEEEEeCCCC
Confidence 222221111124578888875 88888766543
No 36
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=94.79 E-value=0.17 Score=53.96 Aligned_cols=175 Identities=20% Similarity=0.180 Sum_probs=112.2
Q ss_pred chhHhHHHHHHHHHHhhCCCeeeeeccCCCCcHHH---HHHHHcC---C--CCeeecC----------CcchhHHHHHHH
Q 008629 225 EYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYGT---T--HLVFNDD----------IQGTASVVLAGV 286 (559)
Q Consensus 225 ~y~~~vdefv~av~~~fGp~~lIq~EDf~~~~Af~---lL~ryr~---~--~~~FnDD----------iQGTaaV~LAgl 286 (559)
+-..+...|+.++.+.-||+.-|-=+|++.. ... +.+.|+. . ..++.-+ -.-||-=+.-++
T Consensus 119 e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~~~ 197 (421)
T 1v9l_A 119 ELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVAVAT 197 (421)
T ss_dssp HHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHHHHHH
Confidence 4456788899999998899999999999973 222 3466632 1 1222221 122444445566
Q ss_pred HHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCC---Cchhchhhcc
Q 008629 287 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS---LQHFKKPWAH 363 (559)
Q Consensus 287 l~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~---l~~~k~~fA~ 363 (559)
-.+++..|.+|++.||+|.|.|..|...|++|.+ .|. +=+-+.|++|-|++..+=+ |..++..+-.
T Consensus 198 ~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e-----~Ga------kVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~ 266 (421)
T 1v9l_A 198 REMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEK-----MGA------KVIAVSDINGVAYRKEGLNVELIQKNKGLTGP 266 (421)
T ss_dssp HHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHT-----TTC------EEEEEECSSCEEECTTCCCTHHHHHTTTSCHH
T ss_pred HHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----CCC------EEEEEECCCcEEECCCCCCHHHHHHHHHhhCC
Confidence 6778889999999999999999999999988765 353 3344899999998764211 2222221110
Q ss_pred -------cc---CCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 008629 364 -------EH---EPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 417 (559)
Q Consensus 364 -------~~---~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 417 (559)
.. ....+-.| +-.++.|+|+=+.. ++.+|++-++.+ .-.||.--+| |+
T Consensus 267 ~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A~-~~~I~~~~a~~l----~ak~V~EgAN~p~ 325 (421)
T 1v9l_A 267 ALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAAI-ENVIRGDNAGLV----KARLVVEGANGPT 325 (421)
T ss_dssp HHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECSC-SSCBCTTTTTTC----CCSEEECCSSSCB
T ss_pred ccccccccccCceEeCCchh-hhcCCccEEEecCc-CCccchhhHHHc----CceEEEecCCCcC
Confidence 00 11101123 33468899997764 668888777766 4678888888 55
No 37
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=94.76 E-value=0.06 Score=55.16 Aligned_cols=96 Identities=24% Similarity=0.314 Sum_probs=75.5
Q ss_pred CcchhHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCC
Q 008629 275 IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS 353 (559)
Q Consensus 275 iQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGs-AgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~ 353 (559)
..|-.-+|-.|++..++-.+.+|+..++|++|+|. .|..+|.+|... |. .+++++++ .
T Consensus 141 ~~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~~~~-------T-- 199 (300)
T 4a26_A 141 EPPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKE-----NA-------TVTIVHSG-------T-- 199 (300)
T ss_dssp CCSCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------S--
T ss_pred cCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------C--
Confidence 34556788899999999999999999999999876 899999998762 53 47788762 1
Q ss_pred CchhchhhccccCCCCCHH--HHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 008629 354 LQHFKKPWAHEHEPVNNLL--DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 354 l~~~k~~fA~~~~~~~~L~--e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 414 (559)
.+|. +.++. +|++|...+.++.++.++|+ +.-+|+=++
T Consensus 200 ---------------~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 239 (300)
T 4a26_A 200 ---------------STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK------EGAAVVDVG 239 (300)
T ss_dssp ---------------CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC------TTCEEEECC
T ss_pred ---------------CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC------CCcEEEEEe
Confidence 1354 88886 99999999999999998874 455666553
No 38
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=94.62 E-value=0.15 Score=55.30 Aligned_cols=124 Identities=15% Similarity=0.239 Sum_probs=88.2
Q ss_pred cCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcC
Q 008629 273 DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD 352 (559)
Q Consensus 273 DDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~ 352 (559)
+.+.|.......|+ .+.+|..+...+++|+|.|..|.++|+.+... |+ +++.+|++.. +.
T Consensus 234 r~~~~~~~~l~~gw---~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~----~~- 293 (479)
T 1v8b_A 234 DNVYGCRHSLPDGL---MRATDFLISGKIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPI----CA- 293 (479)
T ss_dssp HHHHHHHHHHHHHH---HHHHCCCCTTSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHH----HH-
T ss_pred hchHhHHHHHhhhh---hhccccccCCCEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChh----hH-
Confidence 34445555555662 35688899999999999999999999998753 64 6888887521 00
Q ss_pred CCchhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhc
Q 008629 353 SLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 429 (559)
Q Consensus 353 ~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~EctpedA~~ 429 (559)
+......| ...+|.|+++. .|++|.+....+.++++.++.|. +.-||.=.|.-. .|+.-++..+
T Consensus 294 -~~a~~~g~-----~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gailiNvgrg~--~EId~~aL~~ 357 (479)
T 1v8b_A 294 -IQAVMEGF-----NVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMK---NNAVVGNIGHFD--DEIQVNELFN 357 (479)
T ss_dssp -HHHHTTTC-----EECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCC---TTCEEEECSSTT--TSBCHHHHHT
T ss_pred -HHHHHcCC-----EecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcC---CCcEEEEeCCCC--ccccchhhhc
Confidence 01011111 12479999985 99999998778899999999886 667888787754 6777776665
No 39
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=94.38 E-value=0.094 Score=57.05 Aligned_cols=110 Identities=16% Similarity=0.234 Sum_probs=78.3
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCch
Q 008629 277 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 356 (559)
Q Consensus 277 GTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~ 356 (559)
|+......|+ .+.+|..+...+++|+|.|..|.++|+.+.. .|+ +++.+|++.. + .+..
T Consensus 258 ~~~~~l~~gw---~~~~g~~L~GktVgIIG~G~IG~~vA~~l~~-----~G~-------~V~v~d~~~~----~--~~~a 316 (494)
T 3d64_A 258 GCRESLVDGI---KRATDVMIAGKIAVVAGYGDVGKGCAQSLRG-----LGA-------TVWVTEIDPI----C--ALQA 316 (494)
T ss_dssp HHHTTHHHHH---HHHHCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECSCHH----H--HHHH
T ss_pred hhhhhhhhhh---hhccccccCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCChH----h--HHHH
Confidence 4444444552 3678999999999999999999999998864 263 5888887521 0 0110
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 357 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 357 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
.. ..-...+|.|+++. .|+++......++++++.++.|. +.-||.=.+...
T Consensus 317 ~~-----~G~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gAilINvgrg~ 367 (494)
T 3d64_A 317 AM-----EGYRVVTMEYAADK--ADIFVTATGNYHVINHDHMKAMR---HNAIVCNIGHFD 367 (494)
T ss_dssp HT-----TTCEECCHHHHTTT--CSEEEECSSSSCSBCHHHHHHCC---TTEEEEECSSSS
T ss_pred HH-----cCCEeCCHHHHHhc--CCEEEECCCcccccCHHHHhhCC---CCcEEEEcCCCc
Confidence 00 01112479999985 99999998778899999999996 667888787754
No 40
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=94.35 E-value=0.59 Score=49.81 Aligned_cols=175 Identities=18% Similarity=0.173 Sum_probs=113.2
Q ss_pred chhHhHHHHHHHHHHhhCCCeeeeeccCCCCc--HHHHHHHHcC---C--CCeeecC----------CcchhHHHHHHHH
Q 008629 225 EYAELLDEFMSAVKQNYGEKVLIQFEDFANHN--AFELLAKYGT---T--HLVFNDD----------IQGTASVVLAGVV 287 (559)
Q Consensus 225 ~y~~~vdefv~av~~~fGp~~lIq~EDf~~~~--Af~lL~ryr~---~--~~~FnDD----------iQGTaaV~LAgll 287 (559)
+-..+...|+.++.+.-||+.-|-=+|++..- ---+.+.|+. . ..++--+ -.-||-=+.-++-
T Consensus 118 e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~~~~ 197 (415)
T 2tmg_A 118 ELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKVCAG 197 (415)
T ss_dssp HHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHHHHH
Confidence 44566888899998888888888889998752 1124456632 1 1233221 1235544555667
Q ss_pred HHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhc-hhhccccC
Q 008629 288 AALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK-KPWAHEHE 366 (559)
Q Consensus 288 ~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k-~~fA~~~~ 366 (559)
.+++..|.+|+..||+|.|.|..|...|++|.+ +.|. +=+-+.|++|-+++..+ |+... +.+.....
T Consensus 198 ~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e----~~Ga------kvVavsD~~G~i~dp~G--ld~~~l~~~~~~~g 265 (415)
T 2tmg_A 198 LAMDVLGIDPKKATVAVQGFGNVGQFAALLISQ----ELGS------KVVAVSDSRGGIYNPEG--FDVEELIRYKKEHG 265 (415)
T ss_dssp HHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHH----TTCC------EEEEEECSSCEEECTTC--CCHHHHHHHHHHSS
T ss_pred HHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHH----hcCC------EEEEEEeCCCeEECCCC--CCHHHHHHHHHhhC
Confidence 778889999999999999999999999988865 1253 33448999999887642 33211 11111111
Q ss_pred CC--------CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 008629 367 PV--------NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 417 (559)
Q Consensus 367 ~~--------~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 417 (559)
.+ -+-.| +-.++.|+||=+.. ++..|++-.+.+ .-.+|.--+| |+
T Consensus 266 ~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l----~ak~V~EgAN~p~ 319 (415)
T 2tmg_A 266 TVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI----KAKAVVEGANGPT 319 (415)
T ss_dssp CSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC----CCSEEECCSSSCB
T ss_pred CcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc----CCeEEEeCCCccc
Confidence 10 12334 44578899997776 568888887766 4567777777 55
No 41
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.29 E-value=0.072 Score=52.63 Aligned_cols=98 Identities=19% Similarity=0.272 Sum_probs=57.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchh-------hccc--------
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-------WAHE-------- 364 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~-------fA~~-------- 364 (559)
.||.|+|+|..|.+||..+..+ |. +++++|++ .+ .++..+.. +...
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~----~~---~~~~~~~~i~~~~~~~~~~g~~~~~~~ 65 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDIN----TD---ALDAAKKRFEGLAAVYEKEVAGAADGA 65 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS----HH---HHHHHHHHHHHHHHHHHHHSTTCTTTH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCC----HH---HHHHHHHHHHHHHHHHHHhcccCCHHH
Confidence 6899999999999999998763 64 68888874 11 12111111 1000
Q ss_pred -------cCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCC
Q 008629 365 -------HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQ 419 (559)
Q Consensus 365 -------~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~ 419 (559)
.....++.|+++. .|++|=+-...-...+++++.+......-.|+ .||-++.
T Consensus 66 ~~~~~~~i~~~~~~~~~~~~--aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il-~s~tS~~ 124 (283)
T 4e12_A 66 AQKALGGIRYSDDLAQAVKD--ADLVIEAVPESLDLKRDIYTKLGELAPAKTIF-ATNSSTL 124 (283)
T ss_dssp HHHHHHHCEEESCHHHHTTT--CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEE-EECCSSS
T ss_pred HHHHHcCeEEeCCHHHHhcc--CCEEEEeccCcHHHHHHHHHHHHhhCCCCcEE-EECCCCC
Confidence 0113578888875 89888433211114566777776655444444 3554443
No 42
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=94.18 E-value=0.044 Score=55.19 Aligned_cols=87 Identities=23% Similarity=0.257 Sum_probs=56.6
Q ss_pred HHHHHHHHHhC-CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhc
Q 008629 284 AGVVAALKLIG-GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 362 (559)
Q Consensus 284 Agll~Alr~~g-~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA 362 (559)
.|++.+++..| ..++..+++|+|||.+|.+++..|.. .|. ++++++|+. .+| .......+.
T Consensus 125 ~G~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~-----~G~------~~V~v~nR~----~~k---a~~la~~~~ 186 (297)
T 2egg_A 125 LGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLS-----TAA------ERIDMANRT----VEK---AERLVREGD 186 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECSS----HHH---HHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHH---HHHHHHHhh
Confidence 78888888877 78999999999999888888777754 364 578888874 121 111111221
Q ss_pred c---ccCCCCCHHHHhcccCCcEEEeccCCC
Q 008629 363 H---EHEPVNNLLDAVKVIKPTILIGSSGVG 390 (559)
Q Consensus 363 ~---~~~~~~~L~e~V~~vkPtvLIG~S~~~ 390 (559)
. ......++.++++. .|++|-+++.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~--aDivIn~t~~~ 215 (297)
T 2egg_A 187 ERRSAYFSLAEAETRLAE--YDIIINTTSVG 215 (297)
T ss_dssp SSSCCEECHHHHHHTGGG--CSEEEECSCTT
T ss_pred hccCceeeHHHHHhhhcc--CCEEEECCCCC
Confidence 1 00011245666664 89999887755
No 43
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=94.12 E-value=0.072 Score=53.14 Aligned_cols=110 Identities=21% Similarity=0.212 Sum_probs=72.4
Q ss_pred HHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCC
Q 008629 290 LKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVN 369 (559)
Q Consensus 290 lr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~ 369 (559)
++..+..|.+.+++|+|+|..|..+|+.+.. .|. +++.+|+.- .+ +...+..-++. ....
T Consensus 148 ~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~-----~G~-------~V~~~d~~~----~~---~~~~~~~g~~~-~~~~ 207 (300)
T 2rir_A 148 IQHTDYTIHGSQVAVLGLGRTGMTIARTFAA-----LGA-------NVKVGARSS----AH---LARITEMGLVP-FHTD 207 (300)
T ss_dssp HHTCSSCSTTSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSH----HH---HHHHHHTTCEE-EEGG
T ss_pred HHhcCCCCCCCEEEEEcccHHHHHHHHHHHH-----CCC-------EEEEEECCH----HH---HHHHHHCCCeE-Echh
Confidence 3456789999999999999999999998864 263 688888751 11 11111000110 0114
Q ss_pred CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHH
Q 008629 370 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEA 427 (559)
Q Consensus 370 ~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~EctpedA 427 (559)
+|.|.++. .|++|-+.. .+.++++.++.|. +..+|+=+|.-. .+|..+.+
T Consensus 208 ~l~~~l~~--aDvVi~~~p-~~~i~~~~~~~mk---~g~~lin~a~g~--~~~~~~~a 257 (300)
T 2rir_A 208 ELKEHVKD--IDICINTIP-SMILNQTVLSSMT---PKTLILDLASRP--GGTDFKYA 257 (300)
T ss_dssp GHHHHSTT--CSEEEECCS-SCCBCHHHHTTSC---TTCEEEECSSTT--CSBCHHHH
T ss_pred hHHHHhhC--CCEEEECCC-hhhhCHHHHHhCC---CCCEEEEEeCCC--CCcCHHHH
Confidence 68888874 999997766 4799999888775 567888888632 34445443
No 44
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=94.05 E-value=0.63 Score=50.09 Aligned_cols=176 Identities=18% Similarity=0.191 Sum_probs=112.5
Q ss_pred chhHhHHHHHHHHHHhhCCCeeeeeccCCCCcHH--HHHHHHcC---C--CCeeec----------CCcchhHHHHHHHH
Q 008629 225 EYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYGT---T--HLVFND----------DIQGTASVVLAGVV 287 (559)
Q Consensus 225 ~y~~~vdefv~av~~~fGp~~lIq~EDf~~~~Af--~lL~ryr~---~--~~~FnD----------DiQGTaaV~LAgll 287 (559)
+-..|-..||..+.+..||+.-|-=+|++..-.. -+.+.|++ . .-++-. .-.-||-=+.-++-
T Consensus 139 e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~~~~ 218 (449)
T 1bgv_A 139 EVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVYYVE 218 (449)
T ss_dssp HHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHHHHH
Confidence 4445556688888778899999999999876221 13445532 1 122211 11235545555667
Q ss_pred HHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCC-chh--------c
Q 008629 288 AALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL-QHF--------K 358 (559)
Q Consensus 288 ~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l-~~~--------k 358 (559)
.+++..|.+|+..||+|-|.|..|...|++|.+. |. +=+-+.|++|-|++.. .+ ++. +
T Consensus 219 ~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~--Gi~d~edi~~l~~~k 285 (449)
T 1bgv_A 219 AVMKHENDTLVGKTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE--GITTEEKINYMLEMR 285 (449)
T ss_dssp HHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT--CSCSHHHHHHHHHHH
T ss_pred HHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC--cCCCHHHHHHHHHHH
Confidence 7788889999999999999999999999888764 53 3444789988888753 34 211 1
Q ss_pred -------hhhccc--cCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 008629 359 -------KPWAHE--HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 417 (559)
Q Consensus 359 -------~~fA~~--~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 417 (559)
..|+.. .+.. +-.+.. .++.|+|+=+.. ++..|++-.+.+.. |.-.+|.-=+| |+
T Consensus 286 ~~~~g~v~~y~~~~~a~~i-~~~e~~-~~~~Dil~P~A~-~~~I~~~na~~l~a-~g~kiV~EgAN~p~ 350 (449)
T 1bgv_A 286 ASGRNKVQDYADKFGVQFF-PGEKPW-GQKVDIIMPCAT-QNDVDLEQAKKIVA-NNVKYYIEVANMPT 350 (449)
T ss_dssp HHCCCCTHHHHHHHTCEEE-ETCCGG-GSCCSEEECCSC-TTCBCHHHHHHHHH-TTCCEEECCSSSCB
T ss_pred hccCCChhhcccccCCEEe-Cchhhh-cCCcceeecccc-ccccchhhHHHHHh-cCCeEEEeCCCCcC
Confidence 111110 0000 001122 468999997775 67999999999864 23468888888 65
No 45
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=94.02 E-value=0.073 Score=52.63 Aligned_cols=100 Identities=22% Similarity=0.344 Sum_probs=62.0
Q ss_pred HHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccc
Q 008629 285 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE 364 (559)
Q Consensus 285 gll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~ 364 (559)
|++.+++.. .+++ +++|+|||.+|.+++..|.. .|. ++|+++|+. .+|.+.|.. .|..
T Consensus 97 G~~~~l~~~--~~~~-~vliiGaGg~a~ai~~~L~~-----~G~------~~I~v~nR~----~~ka~~la~---~~~~- 154 (253)
T 3u62_A 97 GVVKSLEGV--EVKE-PVVVVGAGGAARAVIYALLQ-----MGV------KDIWVVNRT----IERAKALDF---PVKI- 154 (253)
T ss_dssp HHHHHTTTC--CCCS-SEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESC----HHHHHTCCS---SCEE-
T ss_pred HHHHHHHhc--CCCC-eEEEECcHHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHHHHHH---Hccc-
Confidence 677777654 5678 99999999999888887765 364 679999884 222222221 1211
Q ss_pred cCCCCCHHHHhcccCCcEEEeccCCC-----CCCCHHHHHHHHcCCCCcEEEecCC
Q 008629 365 HEPVNNLLDAVKVIKPTILIGSSGVG-----RTFTKEVIEAMASFNEKPLILALSN 415 (559)
Q Consensus 365 ~~~~~~L~e~V~~vkPtvLIG~S~~~-----g~Ft~evv~~Ma~~~erPIIFaLSN 415 (559)
....++.++++. +|++|-++..+ ..+.++.++ +..+|+-++-
T Consensus 155 -~~~~~~~~~~~~--aDiVInatp~gm~p~~~~i~~~~l~------~~~~V~Divy 201 (253)
T 3u62_A 155 -FSLDQLDEVVKK--AKSLFNTTSVGMKGEELPVSDDSLK------NLSLVYDVIY 201 (253)
T ss_dssp -EEGGGHHHHHHT--CSEEEECSSTTTTSCCCSCCHHHHT------TCSEEEECSS
T ss_pred -CCHHHHHhhhcC--CCEEEECCCCCCCCCCCCCCHHHhC------cCCEEEEeeC
Confidence 112467788875 99999766533 124444432 4566666543
No 46
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=93.97 E-value=0.11 Score=52.70 Aligned_cols=98 Identities=14% Similarity=0.292 Sum_probs=75.6
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCc
Q 008629 277 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 355 (559)
Q Consensus 277 GTaaV~LAgll~Alr~~g~~l~d~riv~~GAGs-AgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~ 355 (559)
+-.-+|-.|++-.++..|.+|+..++|++|+|. .|.-+|.++.. .|. ...+++++++
T Consensus 136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~-----~g~-----~atVtv~h~~------------ 193 (281)
T 2c2x_A 136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTR-----RSE-----NATVTLCHTG------------ 193 (281)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTS-----TTT-----CCEEEEECTT------------
T ss_pred CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhc-----CCC-----CCEEEEEECc------------
Confidence 556778888999999999999999999999996 58888877753 210 1357777532
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 008629 356 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 416 (559)
Q Consensus 356 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNP 416 (559)
..+|.+.++. +|++|+..+.++.+++++|+ +.-+|+=++-|
T Consensus 194 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 234 (281)
T 2c2x_A 194 ------------TRDLPALTRQ--ADIVVAAVGVAHLLTADMVR------PGAAVIDVGVS 234 (281)
T ss_dssp ------------CSCHHHHHTT--CSEEEECSCCTTCBCGGGSC------TTCEEEECCEE
T ss_pred ------------hhHHHHHHhh--CCEEEECCCCCcccCHHHcC------CCcEEEEccCC
Confidence 1468899986 99999999999999999985 44577766655
No 47
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=93.91 E-value=0.21 Score=52.14 Aligned_cols=162 Identities=19% Similarity=0.190 Sum_probs=103.0
Q ss_pred chhHhHHHHHHHHHHhhCCCeeeeeccCCCCcH--HHHHHHHcC---CCCee---ecCCcchhHHHHHHHHHHHHHhCC-
Q 008629 225 EYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYGT---THLVF---NDDIQGTASVVLAGVVAALKLIGG- 295 (559)
Q Consensus 225 ~y~~~vdefv~av~~~fGp~~lIq~EDf~~~~A--f~lL~ryr~---~~~~F---nDDiQGTaaV~LAgll~Alr~~g~- 295 (559)
+-++.+..|..++.+..|+ -|-=+|++..-. --+.+.|+. +-..+ .|--.-||-=+.-++-.+++..|.
T Consensus 94 ~~e~~~r~~~~~~~~l~g~--~ipa~D~gt~~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G~~ 171 (355)
T 1c1d_A 94 TWARILRIHAENIDKLSGN--YWTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHRGLG 171 (355)
T ss_dssp HHHHHHHHHHHHHHHTTTS--EEEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHHHHHhcCC--cccCCCCCCCHHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhcCCC
Confidence 3455677788888887765 467789976322 125566651 11111 111122455555567777888898
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcccc-CCCCCHHHH
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNLLDA 374 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~-~~~~~L~e~ 374 (559)
.|+..+++|.|.|..|..+|+.+.. .|. ++++.|++ ..| ..|+... ...-++.+.
T Consensus 172 ~L~GktV~I~G~GnVG~~~A~~l~~-----~Ga-------kVvvsD~~----~~~--------~~~a~~~ga~~v~~~el 227 (355)
T 1c1d_A 172 SLDGLTVLVQGLGAVGGSLASLAAE-----AGA-------QLLVADTD----TER--------VAHAVALGHTAVALEDV 227 (355)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC----HHH--------HHHHHHTTCEECCGGGG
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEeCC----ccH--------HHHHHhcCCEEeChHHh
Confidence 8999999999999999999998764 364 57788864 111 1222211 011134454
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CCC
Q 008629 375 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTS 418 (559)
Q Consensus 375 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~ 418 (559)
.+ ++.|+|+=+ +.++.+|++-++.|. -.+|.=-+| |+.
T Consensus 228 l~-~~~DIliP~-A~~~~I~~~~~~~lk----~~iVie~AN~p~t 266 (355)
T 1c1d_A 228 LS-TPCDVFAPC-AMGGVITTEVARTLD----CSVVAGAANNVIA 266 (355)
T ss_dssp GG-CCCSEEEEC-SCSCCBCHHHHHHCC----CSEECCSCTTCBC
T ss_pred hc-CccceecHh-HHHhhcCHHHHhhCC----CCEEEECCCCCCC
Confidence 43 478999954 456799999999983 468888887 653
No 48
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=93.24 E-value=0.15 Score=53.20 Aligned_cols=165 Identities=16% Similarity=0.147 Sum_probs=100.3
Q ss_pred CCCc-chhHhHHHHHHHHHHhhCCCeeeeeccCCCCcHHHHHHHHcCCC-CeeecC---------CcchhHHHHHHHHHH
Q 008629 221 RPSA-EYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTH-LVFNDD---------IQGTASVVLAGVVAA 289 (559)
Q Consensus 221 ~P~~-~y~~~vdefv~av~~~fGp~~lIq~EDf~~~~Af~lL~ryr~~~-~~FnDD---------iQGTaaV~LAgll~A 289 (559)
||.. .-++.+..|...+.+..|+ -|-=+|++..- +.+...-+++ ++---- ..-||-=+.-++..+
T Consensus 86 dP~~~~~~~~~r~~~~~~~~l~g~--~i~A~D~Gt~~--~~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~ 161 (364)
T 1leh_A 86 DPFADKNEDMFRALGRFIQGLNGR--YITAEDVGTTV--DDMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAA 161 (364)
T ss_dssp CTTTTCCHHHHHHHHHHHHTTTTS--EEBCBCTTCCH--HHHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHhcCc--eEEcccCCCCH--HHHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHH
Confidence 5544 4566778888888888875 46778887543 2334433333 111111 123444444455566
Q ss_pred HHHh-CC-CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCC
Q 008629 290 LKLI-GG-TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP 367 (559)
Q Consensus 290 lr~~-g~-~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~ 367 (559)
++.. |. +|++.+|+|.|+|..|..+|+.+.+. |. ++++.|++ . +.+..+...|- ..
T Consensus 162 ~~~~~G~~~L~GktV~V~G~G~VG~~~A~~L~~~-----Ga-------kVvv~D~~----~---~~l~~~a~~~g---a~ 219 (364)
T 1leh_A 162 AKEAFGSDSLEGLAVSVQGLGNVAKALCKKLNTE-----GA-------KLVVTDVN----K---AAVSAAVAEEG---AD 219 (364)
T ss_dssp HHHHHSSCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC----H---HHHHHHHHHHC---CE
T ss_pred HHhhccccCCCcCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEcCC----H---HHHHHHHHHcC---CE
Confidence 6664 76 89999999999999999999998653 64 47788853 1 11333333221 11
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 008629 368 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 417 (559)
Q Consensus 368 ~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 417 (559)
.-++.+... .+.|++|=++ ..+.++++.++.| .-.+|.--+| |+
T Consensus 220 ~v~~~~ll~-~~~DIvip~a-~~~~I~~~~~~~l----g~~iV~e~An~p~ 264 (364)
T 1leh_A 220 AVAPNAIYG-VTCDIFAPCA-LGAVLNDFTIPQL----KAKVIAGSADNQL 264 (364)
T ss_dssp ECCGGGTTT-CCCSEEEECS-CSCCBSTTHHHHC----CCSEECCSCSCCB
T ss_pred EEChHHHhc-cCCcEeeccc-hHHHhCHHHHHhC----CCcEEEeCCCCCc
Confidence 113333332 5789999654 5669999988888 3467776666 54
No 49
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=93.00 E-value=0.59 Score=49.14 Aligned_cols=188 Identities=12% Similarity=0.061 Sum_probs=111.2
Q ss_pred CCCCeeecCCc---chhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 266 TTHLVFNDDIQ---GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 266 ~~~~~FnDDiQ---GTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
..+.+.|.--- .+|=-+++.+++..|-.|..|.+.+|.|+|.|..|-.+|+.+... |+ +++.+|+
T Consensus 80 ~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~ 147 (380)
T 2o4c_A 80 AGIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLRGL-----GW-------KVLVCDP 147 (380)
T ss_dssp HTCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECH
T ss_pred CCCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHHHHHHHHHHHC-----CC-------EEEEEcC
Confidence 35666664322 334458999999999999999999999999999999999988653 64 5788886
Q ss_pred cCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc---C-----CCCCCCHHHHHHHHcCCCCcEEEecC
Q 008629 343 KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS---G-----VGRTFTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 343 ~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S---~-----~~g~Ft~evv~~Ma~~~erPIIFaLS 414 (559)
..- . . . ......+|.|+++. .|+++=.- . ..+.|+++.++.|. +..++.=.|
T Consensus 148 ~~~------~-~-----~---~g~~~~~l~ell~~--aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~s 207 (380)
T 2o4c_A 148 PRQ------A-R-----E---PDGEFVSLERLLAE--ADVISLHTPLNRDGEHPTRHLLDEPRLAALR---PGTWLVNAS 207 (380)
T ss_dssp HHH------H-H-----S---TTSCCCCHHHHHHH--CSEEEECCCCCSSSSSCCTTSBCHHHHHTSC---TTEEEEECS
T ss_pred Chh------h-h-----c---cCcccCCHHHHHHh--CCEEEEeccCccccccchhhhcCHHHHhhCC---CCcEEEECC
Confidence 411 0 0 0 01123579999985 89887542 1 34688999998886 567887677
Q ss_pred CCCCCCCCCHHHHhcccCCcEEEeeCCCC--CCceeCCeeeCccCccccccchhhHHHHHHhCCcccCHHHHHHHHHHHH
Q 008629 415 NPTSQSECTAEEAYTWSKGRAIFASGSPF--DPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALA 492 (559)
Q Consensus 415 NPt~~~EctpedA~~wt~G~aifAsGSPF--~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~~~a~~Itd~m~~aAA~aLA 492 (559)
.-.---|-.-.+|+ .+|+..-|.=-=| +|. .+.. .. + +|+++-|=++--...+ -..|...+++.+.
T Consensus 208 RG~vvd~~aL~~aL--~~g~i~~A~LDV~~~EP~-~~~~-l~--~-~nvi~TPHiag~t~e~-----~~~~~~~~~~nl~ 275 (380)
T 2o4c_A 208 RGAVVDNQALRRLL--EGGADLEVALDVWEGEPQ-ADPE-LA--A-RCLIATPHIAGYSLEG-----KLRGTAQIYQAYC 275 (380)
T ss_dssp CGGGBCHHHHHHHH--HTTCCEEEEESCCTTTTS-CCHH-HH--T-TCSEECSSCTTCCHHH-----HHHHHHHHHHHHH
T ss_pred CCcccCHHHHHHHH--HhCCCceEEeeeeccCCC-Cchh-hc--c-CCEEEccccCcCCHHH-----HHHHHHHHHHHHH
Confidence 52211111112233 3555433311111 110 1111 11 1 4788888776322211 1345555666666
Q ss_pred hccCc
Q 008629 493 KQVTE 497 (559)
Q Consensus 493 ~~v~~ 497 (559)
.....
T Consensus 276 ~~l~g 280 (380)
T 2o4c_A 276 AWRGI 280 (380)
T ss_dssp HHHTC
T ss_pred HHHcC
Confidence 66543
No 50
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=92.87 E-value=0.15 Score=51.42 Aligned_cols=104 Identities=19% Similarity=0.292 Sum_probs=65.9
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc
Q 008629 284 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 363 (559)
Q Consensus 284 Agll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~ 363 (559)
.|++.+++..|.++++.+++|+|||.+|.+++..|.. .|. ++|+++++. .+|.+.|. ..|.
T Consensus 107 ~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~-----~G~------~~v~v~nRt----~~ka~~La---~~~~- 167 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKD-----NFA------KDIYVVTRN----PEKTSEIY---GEFK- 167 (282)
T ss_dssp HHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHH-----TTC------SEEEEEESC----HHHHHHHC---TTSE-
T ss_pred HHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHHHHH---HhcC-
Confidence 7889999988999999999999999888888877765 365 679988874 22211111 1110
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCC---C----CCCHHHHHHHHcCCCCcEEEecC-CCC
Q 008629 364 EHEPVNNLLDAVKVIKPTILIGSSGVG---R----TFTKEVIEAMASFNEKPLILALS-NPT 417 (559)
Q Consensus 364 ~~~~~~~L~e~V~~vkPtvLIG~S~~~---g----~Ft~evv~~Ma~~~erPIIFaLS-NPt 417 (559)
..++.+.-+ +++|++|-++..| . .+..+.++ +..+||=+. ||.
T Consensus 168 ----~~~~~~l~~-l~~DivInaTp~Gm~~~~~~~pi~~~~l~------~~~~v~DlvY~P~ 218 (282)
T 3fbt_A 168 ----VISYDELSN-LKGDVIINCTPKGMYPKEGESPVDKEVVA------KFSSAVDLIYNPV 218 (282)
T ss_dssp ----EEEHHHHTT-CCCSEEEECSSTTSTTSTTCCSSCHHHHT------TCSEEEESCCSSS
T ss_pred ----cccHHHHHh-ccCCEEEECCccCccCCCccCCCCHHHcC------CCCEEEEEeeCCC
Confidence 012222222 3799999877553 1 13444442 456777664 664
No 51
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=92.78 E-value=0.23 Score=48.97 Aligned_cols=84 Identities=23% Similarity=0.363 Sum_probs=56.7
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc
Q 008629 284 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 363 (559)
Q Consensus 284 Agll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~ 363 (559)
.|++.+++..|..++..+++|+|+|.+|..+|..|... |. +++++|+. .++ .......|-
T Consensus 114 ~G~~~~l~~~~~~~~~~~v~iiGaG~~g~aia~~L~~~-----g~-------~V~v~~r~----~~~---~~~l~~~~g- 173 (275)
T 2hk9_A 114 IGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKE-----GA-------KVFLWNRT----KEK---AIKLAQKFP- 173 (275)
T ss_dssp HHHHHHHHHHCTTGGGSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSS----HHH---HHHHTTTSC-
T ss_pred HHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHc-----CC-------EEEEEECC----HHH---HHHHHHHcC-
Confidence 48888888888899999999999999999998888653 52 68888874 111 111111110
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCC
Q 008629 364 EHEPVNNLLDAVKVIKPTILIGSSGVG 390 (559)
Q Consensus 364 ~~~~~~~L~e~V~~vkPtvLIG~S~~~ 390 (559)
..-..++.++++. +|++|-+...+
T Consensus 174 -~~~~~~~~~~~~~--aDiVi~atp~~ 197 (275)
T 2hk9_A 174 -LEVVNSPEEVIDK--VQVIVNTTSVG 197 (275)
T ss_dssp -EEECSCGGGTGGG--CSEEEECSSTT
T ss_pred -CeeehhHHhhhcC--CCEEEEeCCCC
Confidence 0111267777764 99999776644
No 52
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=92.76 E-value=0.33 Score=49.49 Aligned_cols=123 Identities=15% Similarity=0.180 Sum_probs=70.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchh-------hccc-------
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-------WAHE------- 364 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~-------fA~~------- 364 (559)
-.||.|+|+|.-|.+||..+..+ |. +++++|.+- + .+...+.. ++..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~~----~---~~~~~~~~i~~~l~~l~~~G~~~g~~ 66 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIEP----R---QITGALENIRKEMKSLQQSGSLKGSL 66 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSCH----H---HHHHHHHHHHHHHHHHHHTTCCCSSS
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCCH----H---HHHHHHHHHHHHHHHHHHcCcccccc
Confidence 36899999999999999998763 64 588888741 1 11111100 0000
Q ss_pred --------cCCCCCHHHHhcccCCcEEEeccCCCC-CCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcE
Q 008629 365 --------HEPVNNLLDAVKVIKPTILIGSSGVGR-TFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRA 435 (559)
Q Consensus 365 --------~~~~~~L~e~V~~vkPtvLIG~S~~~g-~Ft~evv~~Ma~~~erPIIFaLSNPt~~~EctpedA~~wt~G~a 435 (559)
.....++.|+++. .|++| .+.... .+.+++++.+..+...-.|++ ||=++ .++.+..+......
T Consensus 67 ~~~~~~~~i~~~~~~~eav~~--aDlVi-eavpe~~~~k~~v~~~l~~~~~~~~Ii~-s~tS~---i~~~~la~~~~~~~ 139 (319)
T 2dpo_A 67 SAEEQLSLISSCTNLAEAVEG--VVHIQ-ECVPENLDLKRKIFAQLDSIVDDRVVLS-SSSSC---LLPSKLFTGLAHVK 139 (319)
T ss_dssp CHHHHHHTEEEECCHHHHTTT--EEEEE-ECCCSCHHHHHHHHHHHHTTCCSSSEEE-ECCSS---CCHHHHHTTCTTGG
T ss_pred chHHHhhceEEeCCHHHHHhc--CCEEE-EeccCCHHHHHHHHHHHHhhCCCCeEEE-EeCCC---hHHHHHHHhcCCCC
Confidence 0112589999985 78877 333222 245677788877765444554 44222 45556555443222
Q ss_pred EEeeCCCCCCce
Q 008629 436 IFASGSPFDPFE 447 (559)
Q Consensus 436 ifAsGSPF~pv~ 447 (559)
=|.-+-||.|+.
T Consensus 140 r~ig~Hp~~P~~ 151 (319)
T 2dpo_A 140 QCIVAHPVNPPY 151 (319)
T ss_dssp GEEEEEECSSTT
T ss_pred CeEEeecCCchh
Confidence 233345777763
No 53
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=92.69 E-value=0.17 Score=54.62 Aligned_cols=44 Identities=23% Similarity=0.321 Sum_probs=30.2
Q ss_pred HHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCC
Q 008629 395 KEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGS 441 (559)
Q Consensus 395 ~evv~~Ma~~~erPIIFaLSNPt~~~EctpedA~~wt~G~aifAsGS 441 (559)
.++++.|.++|+.-+++=.|||. +-+|- -+.++++=|+|=..-|
T Consensus 140 ~~i~~~i~~~~P~A~~in~tNP~--~i~t~-a~~~~~~~k~vGlC~~ 183 (477)
T 3u95_A 140 LEIAEKMKKMAPKAYLMQTANPV--FEITQ-AVRRWTGANIIGFCHG 183 (477)
T ss_dssp HHHHHHHHHHCTTCEEEECSSCH--HHHHH-HHHHHHCCCEEEECCG
T ss_pred HHHHHHHHhhCCCeEEEEecChH--HHHHH-HHHHhCCCCeEEECCC
Confidence 68999999999999999999998 44442 2234444444433333
No 54
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=92.60 E-value=0.18 Score=51.57 Aligned_cols=50 Identities=32% Similarity=0.403 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 283 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 283 LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
-.|++.+++-.|..+++.+++|+|||.+|-+|+..|.. .|. ++|+++++.
T Consensus 138 ~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~ 187 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRK 187 (315)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECC
Confidence 46788888888999999999999999777777766654 365 689999885
No 55
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=92.60 E-value=0.17 Score=51.65 Aligned_cols=90 Identities=26% Similarity=0.329 Sum_probs=56.9
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc
Q 008629 284 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 363 (559)
Q Consensus 284 Agll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~ 363 (559)
.|++.+++-.|.++++.+++|+|||.+|-+|+..|.. .|. ++|+++++. ..|.++.......+..
T Consensus 133 ~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt----~~~~~~a~~la~~~~~ 197 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK----DDFFEKAVAFAKRVNE 197 (312)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS----STHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC----CchHHHHHHHHHHhhh
Confidence 5778888888999999999999999888777777654 365 679988874 2211111111112211
Q ss_pred c------cCCCCCH---HHHhcccCCcEEEeccCCC
Q 008629 364 E------HEPVNNL---LDAVKVIKPTILIGSSGVG 390 (559)
Q Consensus 364 ~------~~~~~~L---~e~V~~vkPtvLIG~S~~~ 390 (559)
. ..+..++ .+.++. .|++|-++..|
T Consensus 198 ~~~~~v~~~~~~~l~~~~~~l~~--~DiIINaTp~G 231 (312)
T 3t4e_A 198 NTDCVVTVTDLADQHAFTEALAS--ADILTNGTKVG 231 (312)
T ss_dssp HSSCEEEEEETTCHHHHHHHHHH--CSEEEECSSTT
T ss_pred ccCcceEEechHhhhhhHhhccC--ceEEEECCcCC
Confidence 1 0112344 556664 89999877655
No 56
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=92.56 E-value=0.17 Score=50.89 Aligned_cols=50 Identities=22% Similarity=0.289 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 283 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 283 LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
-.|++.+++..|.++++.+++|+|||.+|-+++..|.. .|. ++|+++++.
T Consensus 110 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 159 (281)
T 3o8q_A 110 GEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLD-----QQP------ASITVTNRT 159 (281)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TCC------SEEEEEESS
T ss_pred HHHHHHHHHHhCCCccCCEEEEECchHHHHHHHHHHHh-----cCC------CeEEEEECC
Confidence 46788888888999999999999999887777766654 365 579988874
No 57
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.55 E-value=0.16 Score=50.84 Aligned_cols=102 Identities=14% Similarity=0.185 Sum_probs=62.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCch---hchhhcc-ccCC-CCCHHHH
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH---FKKPWAH-EHEP-VNNLLDA 374 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~---~k~~fA~-~~~~-~~~L~e~ 374 (559)
.||.|+|||+.|..+|..|... |+ ...++++|++- ++.+.+.. +-..+.. ...- ..++ ++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~-----~~~V~l~d~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~ 66 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GV-----ADDYVFIDANE----AKVKADQIDFQDAMANLEAHGNIVINDW-AA 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HHHHHHHHHHHHHGGGSSSCCEEEESCG-GG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEcCCH----HHHHHHHHHHHhhhhhcCCCeEEEeCCH-HH
Confidence 3899999999999999888653 54 24799999851 11111110 0001110 0000 1356 66
Q ss_pred hcccCCcEEEeccCCC-------CCC-----------CHHHHHHHHcCCCCcEEEecCCCCC
Q 008629 375 VKVIKPTILIGSSGVG-------RTF-----------TKEVIEAMASFNEKPLILALSNPTS 418 (559)
Q Consensus 375 V~~vkPtvLIG~S~~~-------g~F-----------t~evv~~Ma~~~erPIIFaLSNPt~ 418 (559)
++. .|++|=+...+ |.. -+++++.|.++++..+|+-+|||-.
T Consensus 67 ~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 126 (309)
T 1hyh_A 67 LAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVD 126 (309)
T ss_dssp GTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHH
T ss_pred hCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHH
Confidence 764 89888554432 211 1588889988888888888999984
No 58
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=92.43 E-value=0.4 Score=48.56 Aligned_cols=101 Identities=24% Similarity=0.318 Sum_probs=65.5
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCC---CCCHHHHhc
Q 008629 301 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVK 376 (559)
Q Consensus 301 riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~---~~~L~e~V~ 376 (559)
||+|+|| |..|..++..|+. .|+ ...++++|.+-. .....+|.+...+ . +... ..++.++++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~~--~~~a~dL~~~~~~-~-~l~~~~~t~d~~~a~~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAHT--PGVAADLSHIETR-A-TVKGYLGPEQLPDCLK 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSSH--HHHHHHHTTSSSS-C-EEEEEESGGGHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCcc--HHHHHHHhccCcC-c-eEEEecCCCCHHHHhC
Confidence 8999998 9999998877653 354 256999998741 1100012221100 0 0011 135888898
Q ss_pred ccCCcEEEeccCCCC--------------CCCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 377 VIKPTILIGSSGVGR--------------TFTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 377 ~vkPtvLIG~S~~~g--------------~Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
. .|++|=+.+.+. ...+++++.|.+++...+|+-.|||.
T Consensus 68 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv 120 (314)
T 1mld_A 68 G--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPV 120 (314)
T ss_dssp T--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred C--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCc
Confidence 6 899885554442 24567888888899998888899998
No 59
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.39 E-value=0.17 Score=50.88 Aligned_cols=100 Identities=13% Similarity=0.302 Sum_probs=64.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCC----CchhchhhccccCC---CCCHH
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS----LQHFKKPWAHEHEP---VNNLL 372 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~----l~~~k~~fA~~~~~---~~~L~ 372 (559)
.||.|+|||+.|.++|..+... |+ .+++++|.+- ++-+. +... ..+...... ..++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~------~~V~l~D~~~----~~~~~~~~~l~~~-~~~~~~~~~i~~t~d~- 67 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NL------ADVVLFDIAE----GIPQGKALDITHS-MVMFGSTSKVIGTDDY- 67 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SHHHHHHHHHHHH-HHHHTCCCCEEEESCG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCCc----hHHHHHHHHHHhh-hhhcCCCcEEEECCCH-
Confidence 5899999999999999998764 64 1499999852 21110 1100 011100111 1456
Q ss_pred HHhcccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 008629 373 DAVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTS 418 (559)
Q Consensus 373 e~V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 418 (559)
++++. +|++|=+.+.+.. +.+++++.+.++++.-||+-.|||..
T Consensus 68 ~a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~ 125 (317)
T 2ewd_A 68 ADISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLD 125 (317)
T ss_dssp GGGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHH
Confidence 67764 8988866544421 24677888888888899999999973
No 60
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=92.29 E-value=0.47 Score=51.72 Aligned_cols=175 Identities=19% Similarity=0.242 Sum_probs=112.2
Q ss_pred chhHhHHHHHHHHHH--hhCCCeeeeeccCCCCcHH--HHHHHHcCCC---------CeeecCC---------cchhHHH
Q 008629 225 EYAELLDEFMSAVKQ--NYGEKVLIQFEDFANHNAF--ELLAKYGTTH---------LVFNDDI---------QGTASVV 282 (559)
Q Consensus 225 ~y~~~vdefv~av~~--~fGp~~lIq~EDf~~~~Af--~lL~ryr~~~---------~~FnDDi---------QGTaaV~ 282 (559)
|-..+.-.||..+.+ ..||..-|-=+|++..-.. -+.+.|+... |+-..-+ .-||-=+
T Consensus 140 El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eATg~GV 219 (501)
T 3mw9_A 140 ELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGV 219 (501)
T ss_dssp HHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHHHHHH
T ss_pred HHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCchHHHH
Confidence 556777889998875 6789988999999875321 2677875211 1111111 1233333
Q ss_pred HHHHHH------HHHHhCC--CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCC
Q 008629 283 LAGVVA------ALKLIGG--TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL 354 (559)
Q Consensus 283 LAgll~------Alr~~g~--~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l 354 (559)
.-++-+ +++..|. .|++.||+|-|.|..|...|+.|.+. |. +-+-+.|++|-|++.. .+
T Consensus 220 ~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e~-----Ga------kVVavsDs~G~iyd~~--Gi 286 (501)
T 3mw9_A 220 FHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRF-----GA------KCITVGESDGSIWNPD--GI 286 (501)
T ss_dssp HHHHHHHHTCHHHHHHTTCCSSSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECTT--CC
T ss_pred HHHHHHHHhhhHHHHHcCCCCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEcCCceEECCC--CC
Confidence 333332 3446675 58999999999999999999998763 63 4566899999999764 34
Q ss_pred ch-----hchhhccc--cCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 008629 355 QH-----FKKPWAHE--HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 417 (559)
Q Consensus 355 ~~-----~k~~fA~~--~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 417 (559)
+. ++.....- -+....+.+.+-.++.||||=+..+ +.+|++-++.+ .-.||.--+| |+
T Consensus 287 d~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~~-n~I~~~na~~l----~akiV~EgAN~p~ 352 (501)
T 3mw9_A 287 DPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASE-KQLTKSNAPRV----KAKIIAEGANGPT 352 (501)
T ss_dssp CHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSSS-CCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred CHHHHHHHHHhcCCeecccCceeeccccccccceEEeecccc-CccCHhHHHHc----CceEEEeCCCCcC
Confidence 33 22221100 0000001112445689999988875 79999988877 4689999998 54
No 61
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.18 E-value=0.22 Score=50.89 Aligned_cols=101 Identities=19% Similarity=0.326 Sum_probs=66.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcC----CCchhchhhccccCCC---CCHH
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHEPV---NNLL 372 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~----~l~~~k~~fA~~~~~~---~~L~ 372 (559)
.||.|+|||+.|.++|.++... |+ -+++|+|.+- ++-+ .+.+.. .+......+ .++.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~------~~V~L~D~~~----~~~~~~~~~l~~~~-~~~~~~~~i~~t~d~~ 73 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----EL------ADVVLYDVVK----GMPEGKALDLSHVT-SVVDTNVSVRAEYSYE 73 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SHHHHHHHHHHHHH-HHTTCCCCEEEECSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECCh----hHHHHHHHHHHhhh-hccCCCCEEEEeCCHH
Confidence 5899999999999999988763 54 1399999862 2111 011111 111111111 5788
Q ss_pred HHhcccCCcEEEeccCCC---CC----------------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 008629 373 DAVKVIKPTILIGSSGVG---RT----------------FTKEVIEAMASFNEKPLILALSNPTS 418 (559)
Q Consensus 373 e~V~~vkPtvLIG~S~~~---g~----------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 418 (559)
++++. .|++|=+.+.+ |. .-+++.+.|.++++.-+|+=-|||..
T Consensus 74 ea~~~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~ 136 (331)
T 1pzg_A 74 AALTG--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLD 136 (331)
T ss_dssp HHHTT--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHH
T ss_pred HHhCC--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchH
Confidence 88886 89988665433 32 14678888999998888888899984
No 62
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=92.14 E-value=0.18 Score=50.42 Aligned_cols=100 Identities=19% Similarity=0.231 Sum_probs=60.1
Q ss_pred hHHHHHHHHHH-hhCCCeeeeeccCCCCcHHHHHHHHcC--------CCCeeecC-CcchhHHHHHHHHHH-HHHhCCCc
Q 008629 229 LLDEFMSAVKQ-NYGEKVLIQFEDFANHNAFELLAKYGT--------THLVFNDD-IQGTASVVLAGVVAA-LKLIGGTL 297 (559)
Q Consensus 229 ~vdefv~av~~-~fGp~~lIq~EDf~~~~Af~lL~ryr~--------~~~~FnDD-iQGTaaV~LAgll~A-lr~~g~~l 297 (559)
.+.++++.++. .|+. ++.--=-...++++||+... +..++.|+ ..|.-.= -.|++.+ ++..|.++
T Consensus 43 ~l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv~~~~g~l~G~NTD-~~G~~~~lL~~~~~~l 118 (272)
T 3pwz_A 43 DFEAQVLQFRSEGGKG---MNITAPFKLRAFELADRRSERAQLARAANALKFEDGRIVAENFD-GIGLLRDIEENLGEPL 118 (272)
T ss_dssp THHHHHHHHHHTTCCE---EEECTTCHHHHHHHCSEECHHHHHHTCCSEEEEETTEEEEECCH-HHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHHhhCCCCE---EEECchhHHHHHHHHhhCCHHHHHhCccceEEccCCeEEEecCC-HHHHHHHHHHHcCCCc
Confidence 35566666653 3432 33222122345666655421 11133333 3453332 4578888 88788899
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
++.+++|+|||.+|-+++..|.+ .|. ++|+++++.
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~-----~G~------~~v~i~~R~ 153 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQ-----AGP------SELVIANRD 153 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHH-----TCC------SEEEEECSC
T ss_pred cCCEEEEECccHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 99999999999777777766654 365 578888774
No 63
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.99 E-value=0.22 Score=51.25 Aligned_cols=96 Identities=19% Similarity=0.293 Sum_probs=63.3
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcccc----CCCCCHH
Q 008629 297 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLL 372 (559)
Q Consensus 297 l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~----~~~~~L~ 372 (559)
++..+++|+|||.+|.+++..+.. .| | +++++|+. .+| +...+..++... ....++.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~-----~G-----a--~V~v~dr~----~~r---~~~~~~~~~~~~~~~~~~~~~~~ 225 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVG-----LG-----A--QVQIFDIN----VER---LSYLETLFGSRVELLYSNSAEIE 225 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH-----TT-----C--EEEEEESC----HHH---HHHHHHHHGGGSEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CC-----C--EEEEEeCC----HHH---HHHHHHhhCceeEeeeCCHHHHH
Confidence 667899999999999999888764 36 2 68888874 222 222222333210 0112466
Q ss_pred HHhcccCCcEEEeccCCCCC-----CCHHHHHHHHcCCCCcEEEecCCC
Q 008629 373 DAVKVIKPTILIGSSGVGRT-----FTKEVIEAMASFNEKPLILALSNP 416 (559)
Q Consensus 373 e~V~~vkPtvLIG~S~~~g~-----Ft~evv~~Ma~~~erPIIFaLSNP 416 (559)
+.++ +.|++|.+++.++. ++++.++.|. +.-+|+-++.+
T Consensus 226 ~~~~--~~DvVI~~~~~~~~~~~~li~~~~~~~~~---~g~~ivdv~~~ 269 (361)
T 1pjc_A 226 TAVA--EADLLIGAVLVPGRRAPILVPASLVEQMR---TGSVIVDVAVD 269 (361)
T ss_dssp HHHH--TCSEEEECCCCTTSSCCCCBCHHHHTTSC---TTCEEEETTCT
T ss_pred HHHc--CCCEEEECCCcCCCCCCeecCHHHHhhCC---CCCEEEEEecC
Confidence 7776 48999999876652 5888888885 45677777754
No 64
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=91.97 E-value=0.6 Score=49.66 Aligned_cols=112 Identities=21% Similarity=0.250 Sum_probs=76.8
Q ss_pred chhHhHHHHHHHHHHhhCCCeeeeeccCCCCcHHH---HHHHHc---CCC-C---eeecC----------CcchhHHHHH
Q 008629 225 EYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYG---TTH-L---VFNDD----------IQGTASVVLA 284 (559)
Q Consensus 225 ~y~~~vdefv~av~~~fGp~~lIq~EDf~~~~Af~---lL~ryr---~~~-~---~FnDD----------iQGTaaV~LA 284 (559)
+-..+...|+.++.+.-||+.-|-=+|++.. ... +.+.|. ... + ++--+ -.-||-=+.-
T Consensus 118 e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~ 196 (419)
T 1gtm_A 118 EKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARGASY 196 (419)
T ss_dssp HHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhhHHHH
Confidence 4456788899999988889888989999874 222 345553 221 2 33222 1235555555
Q ss_pred HHHHHHHHhCCC-cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccc
Q 008629 285 GVVAALKLIGGT-LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIV 347 (559)
Q Consensus 285 gll~Alr~~g~~-l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~ 347 (559)
++-.+++..|.. |++.++.|+|.|..|..+|+++... .|+ +-+.+-|+.|-++
T Consensus 197 ~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~----~G~------kVv~~sD~~g~~~ 250 (419)
T 1gtm_A 197 TIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSED----FGM------KVVAVSDSKGGIY 250 (419)
T ss_dssp HHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHT----TCC------EEEEEECSSCEEE
T ss_pred HHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHh----cCC------EEEEEeCCCcccc
Confidence 677788889999 9999999999999999999988651 264 3333448876544
No 65
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=91.90 E-value=0.25 Score=49.41 Aligned_cols=49 Identities=33% Similarity=0.389 Sum_probs=40.4
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 284 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 284 Agll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.|++.+++..|.+++..|++++|||-|+-+|+-.|.+ .|. ++|+++++.
T Consensus 110 ~Gf~~~L~~~g~~~~~~~~lilGaGGaarai~~aL~~-----~g~------~~i~i~nRt 158 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAE-----AGI------ASITLCDPS 158 (269)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC
T ss_pred HHHHHHHHHhCCCcccCeEEEEecHHHHHHHHHHHHH-----hCC------CeEEEeCCC
Confidence 4567888889999999999999999999888776654 365 689998873
No 66
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=91.79 E-value=1.1 Score=47.28 Aligned_cols=120 Identities=10% Similarity=0.093 Sum_probs=85.9
Q ss_pred CCCCeeecCC---cchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 266 TTHLVFNDDI---QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 266 ~~~~~FnDDi---QGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
..+.+.|.-- +.+|=-+++.+|+..|..|..|.+.++.|+|.|..|-.+|+.+... |+ +++.+|+
T Consensus 83 ~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~ 150 (381)
T 3oet_A 83 AGIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEAL-----GI-------RTLLCDP 150 (381)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECH
T ss_pred CCEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECC
Confidence 3455555432 2445568899999999999999999999999999999999998753 65 5788886
Q ss_pred cCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC--------CCCCCCHHHHHHHHcCCCCcEEEecC
Q 008629 343 KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG--------VGRTFTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 343 ~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~--------~~g~Ft~evv~~Ma~~~erPIIFaLS 414 (559)
.. . . .. ......+|.|+++. .|+++=.-- .-+.|+++.++.|. +..|+.=.|
T Consensus 151 ~~----~--~-~~--------~~~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~a 210 (381)
T 3oet_A 151 PR----A--A-RG--------DEGDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLK---PGAILINAC 210 (381)
T ss_dssp HH----H--H-TT--------CCSCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSC---TTEEEEECS
T ss_pred Ch----H--H-hc--------cCcccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCC---CCcEEEECC
Confidence 31 0 0 00 11123579999986 898874431 34689999999996 677888777
Q ss_pred CCC
Q 008629 415 NPT 417 (559)
Q Consensus 415 NPt 417 (559)
.-.
T Consensus 211 RG~ 213 (381)
T 3oet_A 211 RGP 213 (381)
T ss_dssp CGG
T ss_pred CCc
Confidence 633
No 67
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.78 E-value=0.25 Score=50.89 Aligned_cols=97 Identities=23% Similarity=0.341 Sum_probs=60.4
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc----ccCCCCCH
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----EHEPVNNL 371 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~----~~~~~~~L 371 (559)
.+...+++|+|+|..|..+|+.+.. .|. +++++|++- ++ +...+..+.. +.....++
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~-----~Ga-------~V~~~d~~~----~~---~~~~~~~~g~~~~~~~~~~~~l 223 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALG-----MGA-------QVTILDVNH----KR---LQYLDDVFGGRVITLTATEANI 223 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSEEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHHHHHhcCceEEEecCCHHHH
Confidence 3778999999999999999888764 363 588888741 11 2111111111 00112357
Q ss_pred HHHhcccCCcEEEeccCCCC-----CCCHHHHHHHHcCCCCcEEEecCCC
Q 008629 372 LDAVKVIKPTILIGSSGVGR-----TFTKEVIEAMASFNEKPLILALSNP 416 (559)
Q Consensus 372 ~e~V~~vkPtvLIG~S~~~g-----~Ft~evv~~Ma~~~erPIIFaLSNP 416 (559)
.++++. .|++|.+.+.++ .++++.++.|. +.-+|.-+|.+
T Consensus 224 ~~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk---~gg~iV~v~~~ 268 (369)
T 2eez_A 224 KKSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMK---EGAVIVDVAVD 268 (369)
T ss_dssp HHHHHH--CSEEEECCC-------CCSCHHHHTTSC---TTCEEEECC--
T ss_pred HHHHhC--CCEEEECCCCCccccchhHHHHHHHhhc---CCCEEEEEecC
Confidence 788874 899999887553 46899999885 34566666644
No 68
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=91.76 E-value=0.16 Score=54.51 Aligned_cols=106 Identities=16% Similarity=0.293 Sum_probs=66.9
Q ss_pred cccceEEEeCcChH--HHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc---ccCCCCCH
Q 008629 297 LAEHRFLFLGAGEA--GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH---EHEPVNNL 371 (559)
Q Consensus 297 l~d~riv~~GAGsA--giGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~---~~~~~~~L 371 (559)
++..||.|+|||+. |.|++..|+.. ..+ . ..++|+|.+- +|-+.+....+.+.+ .-.-..++
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~~----e~le~~~~~~~~l~~~~~~I~~TtD~ 69 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLDF----EAAQKNEVIGNHSGNGRWRYEAVSTL 69 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSSH----HHHHHHHHHHTTSTTSCEEEEEESSH
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCCH----HHHHHHHHHHHHHhccCCeEEEECCH
Confidence 35679999999995 68999888752 222 2 3899999751 110000000001111 00112579
Q ss_pred HHHhcccCCcEEEeccCCC---------------CCC---------------------CHHHHHHHHcCCCCcEEEecCC
Q 008629 372 LDAVKVIKPTILIGSSGVG---------------RTF---------------------TKEVIEAMASFNEKPLILALSN 415 (559)
Q Consensus 372 ~e~V~~vkPtvLIG~S~~~---------------g~F---------------------t~evv~~Ma~~~erPIIFaLSN 415 (559)
.||++. +|.+|=.-.+| |.. -.++++.|.++|+.-+++-.||
T Consensus 70 ~eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tN 147 (450)
T 3fef_A 70 KKALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTN 147 (450)
T ss_dssp HHHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred HHHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999986 89888544332 221 3577788889999999999999
Q ss_pred CC
Q 008629 416 PT 417 (559)
Q Consensus 416 Pt 417 (559)
|.
T Consensus 148 Pv 149 (450)
T 3fef_A 148 PM 149 (450)
T ss_dssp SH
T ss_pred ch
Confidence 98
No 69
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=91.35 E-value=0.39 Score=46.32 Aligned_cols=109 Identities=15% Similarity=0.211 Sum_probs=61.4
Q ss_pred hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCcc--ccCCcCCCc-hhchhhcccc--CC
Q 008629 293 IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI--VSSRKDSLQ-HFKKPWAHEH--EP 367 (559)
Q Consensus 293 ~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi--~~~R~~~l~-~~k~~fA~~~--~~ 367 (559)
...++...||.|+|+|..|.++|..|... | .+++++|++-=- .+...+.+. .....++... ..
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~-----G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADL-----G-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH 80 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee
Confidence 45678889999999999999999998763 5 368888875211 000000000 0011222211 11
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHH-HcCCCCcEEEecCCCC
Q 008629 368 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAM-ASFNEKPLILALSNPT 417 (559)
Q Consensus 368 ~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~M-a~~~erPIIFaLSNPt 417 (559)
..++.|+++. +|++| ++..+. ...++++.+ +..-+..+|.-+|||.
T Consensus 81 ~~~~~e~~~~--aDvVi-lavp~~-~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NATEGA-SSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECSCGG-GHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-EccCcH-HHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 2578999986 88887 444332 345666666 3333667999999974
No 70
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=91.25 E-value=1.7 Score=43.99 Aligned_cols=121 Identities=16% Similarity=0.113 Sum_probs=81.0
Q ss_pred CCCCeeecCCc---chhHHHHHHHHHHHHH----------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhc
Q 008629 266 TTHLVFNDDIQ---GTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQT 326 (559)
Q Consensus 266 ~~~~~FnDDiQ---GTaaV~LAgll~Alr~----------------~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~ 326 (559)
..+.+.|---- .+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 90 ~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~----- 164 (313)
T 2ekl_A 90 RNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANAM----- 164 (313)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHHT-----
T ss_pred CCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHHC-----
Confidence 45666664332 2344478888888775 35689999999999999999999988652
Q ss_pred CCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHHHHH
Q 008629 327 KAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEAMA 402 (559)
Q Consensus 327 G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv~~Ma 402 (559)
|+ +++.+|+.. +. . ..+ .+ .-...+|.|+++. .|+++=.-- ..++++++.++.|.
T Consensus 165 G~-------~V~~~d~~~----~~---~-~~~-~~---g~~~~~l~ell~~--aDvVvl~~P~~~~t~~li~~~~l~~mk 223 (313)
T 2ekl_A 165 GM-------KVLAYDILD----IR---E-KAE-KI---NAKAVSLEELLKN--SDVISLHVTVSKDAKPIIDYPQFELMK 223 (313)
T ss_dssp TC-------EEEEECSSC----CH---H-HHH-HT---TCEECCHHHHHHH--CSEEEECCCCCTTSCCSBCHHHHHHSC
T ss_pred CC-------EEEEECCCc----ch---h-HHH-hc---CceecCHHHHHhh--CCEEEEeccCChHHHHhhCHHHHhcCC
Confidence 64 588887641 10 0 011 11 0011378998885 898885532 34678899998886
Q ss_pred cCCCCcEEEecCC
Q 008629 403 SFNEKPLILALSN 415 (559)
Q Consensus 403 ~~~erPIIFaLSN 415 (559)
+..++.=.|.
T Consensus 224 ---~ga~lIn~ar 233 (313)
T 2ekl_A 224 ---DNVIIVNTSR 233 (313)
T ss_dssp ---TTEEEEESSC
T ss_pred ---CCCEEEECCC
Confidence 5678887777
No 71
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=91.12 E-value=0.31 Score=47.46 Aligned_cols=81 Identities=25% Similarity=0.343 Sum_probs=54.7
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc
Q 008629 284 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 363 (559)
Q Consensus 284 Agll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~ 363 (559)
.|++.+++..|.++++ +++|+|+|.+|..+|..+.. .|. +++++|++ .++ .......|..
T Consensus 102 ~g~~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~-----~g~-------~v~v~~r~----~~~---~~~l~~~~~~ 161 (263)
T 2d5c_A 102 PGFLEALKAGGIPLKG-PALVLGAGGAGRAVAFALRE-----AGL-------EVWVWNRT----PQR---ALALAEEFGL 161 (263)
T ss_dssp HHHHHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS----HHH---HHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC----HHH---HHHHHHHhcc
Confidence 5888889888889999 99999999999999887764 252 58888874 111 1111112211
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCC
Q 008629 364 EHEPVNNLLDAVKVIKPTILIGSSGVG 390 (559)
Q Consensus 364 ~~~~~~~L~e~V~~vkPtvLIG~S~~~ 390 (559)
. ..++.++ + ++|++|-+...+
T Consensus 162 ~---~~~~~~~-~--~~Divi~~tp~~ 182 (263)
T 2d5c_A 162 R---AVPLEKA-R--EARLLVNATRVG 182 (263)
T ss_dssp E---ECCGGGG-G--GCSEEEECSSTT
T ss_pred c---hhhHhhc-c--CCCEEEEccCCC
Confidence 1 2467676 5 499999776644
No 72
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=91.06 E-value=0.78 Score=46.63 Aligned_cols=101 Identities=14% Similarity=0.175 Sum_probs=66.4
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc----ccCCCCCHHH
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----EHEPVNNLLD 373 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~----~~~~~~~L~e 373 (559)
...+++|+|+|..|-.+++.+... .++ ++|+++|+. +. ..+...+.. +.... ++.|
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~------~a---~~la~~l~~~~g~~~~~~-~~~e 179 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSAR----FAL------EAILVHDPY------AS---PEILERIGRRCGVPARMA-APAD 179 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECTT------CC---HHHHHHHHHHHTSCEEEC-CHHH
T ss_pred CCcEEEEECccHHHHHHHHHHHHh----CCC------cEEEEECCc------HH---HHHHHHHHHhcCCeEEEe-CHHH
Confidence 457999999999998888776653 233 689999986 21 222222221 11123 8999
Q ss_pred HhcccCCcEEEeccCCC-CCCCHHHHHHHHcCCCCcEEEecCC--CCCCCCCCHHHH
Q 008629 374 AVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALSN--PTSQSECTAEEA 427 (559)
Q Consensus 374 ~V~~vkPtvLIG~S~~~-g~Ft~evv~~Ma~~~erPIIFaLSN--Pt~~~EctpedA 427 (559)
+++. .|++|-++..+ .+|..+++ .+..+|..++. |. +-|+.++-.
T Consensus 180 av~~--aDIVi~aT~s~~pvl~~~~l------~~G~~V~~vGs~~p~-~~El~~~~~ 227 (313)
T 3hdj_A 180 IAAQ--ADIVVTATRSTTPLFAGQAL------RAGAFVGAIGSSLPH-TRELDDEAL 227 (313)
T ss_dssp HHHH--CSEEEECCCCSSCSSCGGGC------CTTCEEEECCCSSTT-CCCCCHHHH
T ss_pred HHhh--CCEEEEccCCCCcccCHHHc------CCCcEEEECCCCCCc-hhhcCHHHH
Confidence 9986 99999776433 35555443 36778888876 44 588888754
No 73
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=90.95 E-value=0.33 Score=50.12 Aligned_cols=114 Identities=16% Similarity=0.163 Sum_probs=68.7
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc
Q 008629 284 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 363 (559)
Q Consensus 284 Agll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~ 363 (559)
+|.+++.... +....++.|+|+|..|-.++..+... .+. ++++++|+. .++ ...+...|..
T Consensus 116 ~s~laa~~la--~~~~~~v~iIGaG~~a~~~a~al~~~----~~~------~~V~V~~r~----~~~---a~~la~~~~~ 176 (350)
T 1x7d_A 116 TSLMAAQALA--RPNARKMALIGNGAQSEFQALAFHKH----LGI------EEIVAYDTD----PLA---TAKLIANLKE 176 (350)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSTTHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHTT
T ss_pred HHHHHHHHhc--cccCCeEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHHHh
Confidence 4556665553 34568999999999999988776543 243 678888874 222 2233333321
Q ss_pred c----cCCCCCHHHHhcccCCcEEEeccCCC---CCCCHHHHHHHHcCCCCcEEEecCC--CCCCCCCCHH
Q 008629 364 E----HEPVNNLLDAVKVIKPTILIGSSGVG---RTFTKEVIEAMASFNEKPLILALSN--PTSQSECTAE 425 (559)
Q Consensus 364 ~----~~~~~~L~e~V~~vkPtvLIG~S~~~---g~Ft~evv~~Ma~~~erPIIFaLSN--Pt~~~Ectpe 425 (559)
. .....++.|+++. .|++|=++..+ ..|..+.++ +.-.|+.++. |. +-|+.++
T Consensus 177 ~~g~~~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~l~------~G~~V~~vgs~~p~-~~El~~~ 238 (350)
T 1x7d_A 177 YSGLTIRRASSVAEAVKG--VDIITTVTADKAYATIITPDMLE------PGMHLNAVGGDCPG-KTELHAD 238 (350)
T ss_dssp CTTCEEEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGGCC------TTCEEEECSCCBTT-BEEECHH
T ss_pred ccCceEEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHHcC------CCCEEEECCCCCCC-ceeeCHH
Confidence 0 1123689999985 89998766543 134433322 3447777775 55 5777664
No 74
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=90.92 E-value=0.29 Score=52.97 Aligned_cols=124 Identities=15% Similarity=0.134 Sum_probs=73.5
Q ss_pred cceEEEeCcChHH--HHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc---ccCC---CCC
Q 008629 299 EHRFLFLGAGEAG--TGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH---EHEP---VNN 370 (559)
Q Consensus 299 d~riv~~GAGsAg--iGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~---~~~~---~~~ 370 (559)
..||.|+|||+.| .++|..|+.. .++ +-..++|+|.+- ++-+........+.. .... ..+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~----e~l~~~~~~~~~~l~~~~~~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDE----ERLDAILTIAKKYVEEVGADLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCH----HHHHHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCcEEEEECC
Confidence 4589999999965 4446666531 122 136799999852 211111111111111 0111 247
Q ss_pred HHHHhcccCCcEEEeccCC---------------CCCCC-------------------------HHHHHHHHcCCCCcEE
Q 008629 371 LLDAVKVIKPTILIGSSGV---------------GRTFT-------------------------KEVIEAMASFNEKPLI 410 (559)
Q Consensus 371 L~e~V~~vkPtvLIG~S~~---------------~g~Ft-------------------------~evv~~Ma~~~erPII 410 (559)
+.++++. .|++|=+.+. .|.|. +++++.|.++|+.-+|
T Consensus 71 ~~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~i 148 (480)
T 1obb_A 71 LDDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWY 148 (480)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEE
Confidence 8889986 8988855532 13333 6899999999999999
Q ss_pred EecCCCCCCCCCCHHHHhcccCCcEEEeeC
Q 008629 411 LALSNPTSQSECTAEEAYTWSKGRAIFASG 440 (559)
Q Consensus 411 FaLSNPt~~~EctpedA~~wt~G~aifAsG 440 (559)
+-.|||. . +..+-+.++..- -+|.+|
T Consensus 149 i~~TNPv--d-i~t~~~~k~p~~-rviG~c 174 (480)
T 1obb_A 149 LQAANPI--F-EGTTLVTRTVPI-KAVGFC 174 (480)
T ss_dssp EECSSCH--H-HHHHHHHHHSCS-EEEEEC
T ss_pred EEeCCcH--H-HHHHHHHHCCCC-cEEecC
Confidence 9999998 2 233334444443 455554
No 75
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.88 E-value=0.087 Score=53.01 Aligned_cols=123 Identities=18% Similarity=0.302 Sum_probs=67.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCC-CCCHHHHhcccC
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP-VNNLLDAVKVIK 379 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~-~~~L~e~V~~vk 379 (559)
||.|+|||+.|.++|..+.. .|. ...++++|.+---......++.+.. +|.....- ..+ .++++.
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~-----~~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~~~i~~~~-~~a~~~-- 67 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGS-----CSELVLVDRDEDRAQAEAEDIAHAA-PVSHGTRVWHGG-HSELAD-- 67 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHTTSC-CTTSCCEEEEEC-GGGGTT--
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCCHHHHHHHHHhhhhhh-hhcCCeEEEECC-HHHhCC--
Confidence 89999999999999977754 354 1479999985210000000011111 11111000 023 356664
Q ss_pred CcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeC
Q 008629 380 PTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASG 440 (559)
Q Consensus 380 PtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~~~EctpedA~~wt~G~aifAsG 440 (559)
.|++|=+.+.+.. .-+++++.|+++++.-+|+-.|||.. .....+.+.+.-.-+|.+|
T Consensus 68 aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~---~~~~~~~~~~~~~rviG~g 139 (304)
T 2v6b_A 68 AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVD---LLTDLATQLAPGQPVIGSG 139 (304)
T ss_dssp CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHH---HHHHHHHHHSCSSCEEECT
T ss_pred CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchH---HHHHHHHHhCChhcEEeCC
Confidence 8988866544421 12788888988888888877999983 2233344443333455554
No 76
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.87 E-value=0.41 Score=42.56 Aligned_cols=102 Identities=13% Similarity=0.140 Sum_probs=53.0
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCc-hhchhhcc-ccCCCCCHH
Q 008629 295 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAH-EHEPVNNLL 372 (559)
Q Consensus 295 ~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~-~~k~~fA~-~~~~~~~L~ 372 (559)
+.+...+|+|+|+|..|..+|+.+.. .| .+++++|++ ..+.+.+. .....+.. +......|.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~-----~g-------~~V~vid~~----~~~~~~~~~~~g~~~~~~d~~~~~~l~ 78 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASS-----SG-------HSVVVVDKN----EYAFHRLNSEFSGFTVVGDAAEFETLK 78 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC----GGGGGGSCTTCCSEEEESCTTSHHHHH
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC----HHHHHHHHhcCCCcEEEecCCCHHHHH
Confidence 34566799999999999999988865 25 368888875 12211121 11111111 111111233
Q ss_pred HH-hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 008629 373 DA-VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 415 (559)
Q Consensus 373 e~-V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 415 (559)
++ ++ ++|++|-+.... ..+..+++.+...+....|++.+|
T Consensus 79 ~~~~~--~ad~Vi~~~~~~-~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 79 ECGME--KADMVFAFTNDD-STNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp TTTGG--GCSEEEECSSCH-HHHHHHHHHHHHTSCCSEEEEECS
T ss_pred HcCcc--cCCEEEEEeCCc-HHHHHHHHHHHHHCCCCeEEEEEC
Confidence 33 33 489998776643 233444444333344455555544
No 77
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=90.67 E-value=0.31 Score=49.02 Aligned_cols=103 Identities=17% Similarity=0.264 Sum_probs=63.5
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc--cCccccCCcCCCchhchhhccccCC-CCCHHHHhc
Q 008629 301 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSSRKDSLQHFKKPWAHEHEP-VNNLLDAVK 376 (559)
Q Consensus 301 riv~~G-AGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~--~GLi~~~R~~~l~~~k~~fA~~~~~-~~~L~e~V~ 376 (559)
||+|.| +|..|..++..|+. .|+ ...++|+|. +-=-.+.-..+|.+... +..+..- ..+ .++++
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~v~~~~-~~a~~ 69 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIAL-----RDI-----ADEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNTRVRQGG-YEDTA 69 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TTC-----CSEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCCEEEECC-GGGGT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCcEEEeCC-HHHhC
Confidence 899999 99999998887754 254 246999997 31000000001222111 1111000 022 56676
Q ss_pred ccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 377 VIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 377 ~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
. .|++|=+.+.+ |. .+++++++|.+++.+.+|+--|||.
T Consensus 70 ~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv 122 (303)
T 1o6z_A 70 G--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV 122 (303)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH
T ss_pred C--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChH
Confidence 5 89988666654 32 4677889999999999999999998
No 78
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=90.65 E-value=0.25 Score=48.42 Aligned_cols=37 Identities=27% Similarity=0.384 Sum_probs=32.4
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+|++.||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d 61 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDD 61 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCC
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 56788999999999999999988764 87 789999987
No 79
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=90.64 E-value=1.9 Score=43.79 Aligned_cols=140 Identities=14% Similarity=0.113 Sum_probs=85.3
Q ss_pred eeeccCCCCcHHHHHHHHcCCCCeeecCCcc---hhHHHHHHHHHHHHHh---------------------CCCcccceE
Q 008629 247 IQFEDFANHNAFELLAKYGTTHLVFNDDIQG---TASVVLAGVVAALKLI---------------------GGTLAEHRF 302 (559)
Q Consensus 247 Iq~EDf~~~~Af~lL~ryr~~~~~FnDDiQG---TaaV~LAgll~Alr~~---------------------g~~l~d~ri 302 (559)
|+.-..+..|- .+-.--+..+++.|----. +|=-+++.+|+..|-. |..|.+.+|
T Consensus 80 I~~~~~G~d~i-d~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~v 158 (330)
T 2gcg_A 80 ISTMSVGIDHL-ALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTV 158 (330)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEE
T ss_pred EEECCcccccc-cHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEE
Confidence 55555555552 1111123567777764333 3444788888877622 356889999
Q ss_pred EEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcE
Q 008629 303 LFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTI 382 (559)
Q Consensus 303 v~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtv 382 (559)
.|+|.|..|..+|+.+.. .|. +++.+|+.. .+ ....+ .+ .... .+|.|+++. .|+
T Consensus 159 gIIG~G~iG~~iA~~l~~-----~G~-------~V~~~d~~~----~~---~~~~~-~~--g~~~-~~l~e~l~~--aDv 213 (330)
T 2gcg_A 159 GIIGLGRIGQAIARRLKP-----FGV-------QRFLYTGRQ----PR---PEEAA-EF--QAEF-VSTPELAAQ--SDF 213 (330)
T ss_dssp EEECCSHHHHHHHHHHGG-----GTC-------CEEEEESSS----CC---HHHHH-TT--TCEE-CCHHHHHHH--CSE
T ss_pred EEECcCHHHHHHHHHHHH-----CCC-------EEEEECCCC----cc---hhHHH-hc--Ccee-CCHHHHHhh--CCE
Confidence 999999999999998754 364 588888641 11 11111 11 0011 278888875 888
Q ss_pred EEeccC----CCCCCCHHHHHHHHcCCCCcEEEecCC
Q 008629 383 LIGSSG----VGRTFTKEVIEAMASFNEKPLILALSN 415 (559)
Q Consensus 383 LIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSN 415 (559)
+|=.-. ..+.+++++++.|. +..++.-.|+
T Consensus 214 Vi~~vp~~~~t~~~i~~~~~~~mk---~gailIn~sr 247 (330)
T 2gcg_A 214 IVVACSLTPATEGLCNKDFFQKMK---ETAVFINISR 247 (330)
T ss_dssp EEECCCCCTTTTTCBSHHHHHHSC---TTCEEEECSC
T ss_pred EEEeCCCChHHHHhhCHHHHhcCC---CCcEEEECCC
Confidence 874432 23577888888875 4567765655
No 80
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=90.64 E-value=0.35 Score=49.12 Aligned_cols=111 Identities=14% Similarity=0.079 Sum_probs=66.6
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc--Ccc--ccCCcCCCchhchhhccccCCCCCHHHH
Q 008629 300 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK--GLI--VSSRKDSLQHFKKPWAHEHEPVNNLLDA 374 (559)
Q Consensus 300 ~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~--GLi--~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 374 (559)
.||+|.|| |..|..++..|+. .|+-..+-...++++|.+ .-- ..+...+|.+.-.+|..+.....++.++
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTA 80 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHH
Confidence 58999998 9999998877654 254111112479999975 100 0000001221101222221222578999
Q ss_pred hcccCCcEEEeccCCCCC--------------CCHHHHHHHHcCC-CCcEEEecCCCC
Q 008629 375 VKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFN-EKPLILALSNPT 417 (559)
Q Consensus 375 V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~-erPIIFaLSNPt 417 (559)
++. .|++|=+.+.+.. .++++++.+.+++ .+.+|+=.|||.
T Consensus 81 l~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv 136 (329)
T 1b8p_A 81 FKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA 136 (329)
T ss_dssp TTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred hCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch
Confidence 986 8988866554421 3567888999986 787777789998
No 81
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=90.62 E-value=1.6 Score=47.41 Aligned_cols=107 Identities=17% Similarity=0.194 Sum_probs=75.2
Q ss_pred HHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccc-cCCCC
Q 008629 291 KLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVN 369 (559)
Q Consensus 291 r~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~-~~~~~ 369 (559)
|.++..+.+.+|+|+|+|..|.++|+.+.. .|. +++.+|++- .| + ..|+. .-...
T Consensus 266 r~~~~~l~GktV~IiG~G~IG~~~A~~lka-----~Ga-------~Viv~d~~~----~~---~-----~~A~~~Ga~~~ 321 (494)
T 3ce6_A 266 RGTDALIGGKKVLICGYGDVGKGCAEAMKG-----QGA-------RVSVTEIDP----IN---A-----LQAMMEGFDVV 321 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCH----HH---H-----HHHHHTTCEEC
T ss_pred hccCCCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----HH---H-----HHHHHcCCEEe
Confidence 456678899999999999999999988764 263 588887641 11 1 11211 11124
Q ss_pred CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHh
Q 008629 370 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAY 428 (559)
Q Consensus 370 ~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~EctpedA~ 428 (559)
++.++++. .|++|-+++..++++++.++.|. +.-+|.-.+... .|+..+..+
T Consensus 322 ~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk---~ggilvnvG~~~--~eId~~aL~ 373 (494)
T 3ce6_A 322 TVEEAIGD--ADIVVTATGNKDIIMLEHIKAMK---DHAILGNIGHFD--NEIDMAGLE 373 (494)
T ss_dssp CHHHHGGG--CSEEEECSSSSCSBCHHHHHHSC---TTCEEEECSSSG--GGBCHHHHH
T ss_pred cHHHHHhC--CCEEEECCCCHHHHHHHHHHhcC---CCcEEEEeCCCC--CccCHHHHH
Confidence 68888874 99999998888899999999986 566777777765 366655544
No 82
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=90.48 E-value=0.49 Score=47.90 Aligned_cols=101 Identities=16% Similarity=0.267 Sum_probs=64.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccc-cCCCCCHHHHhccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVI 378 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~-~~~~~~L~e~V~~v 378 (559)
.||.|+|||..|.|+|..++.. |+ -..++|+|.+-= ..+...++.+ +... .....++ ++++.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~-----~~ev~L~Di~~~-~~g~a~dl~~----~~~~~i~~t~d~-~~l~~- 77 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GI-----ADRLVLLDLSEG-TKGATMDLEI----FNLPNVEISKDL-SASAH- 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECCC------CHHHHHH----HTCTTEEEESCG-GGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CC-----CCEEEEEcCCcc-hHHHHHHHhh----hcCCCeEEeCCH-HHHCC-
Confidence 6899999999999999988643 54 267999998631 1111001221 2111 0111466 66775
Q ss_pred CCcEEEeccCCC--CC-----------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 008629 379 KPTILIGSSGVG--RT-----------FTKEVIEAMASFNEKPLILALSNPTS 418 (559)
Q Consensus 379 kPtvLIG~S~~~--g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~ 418 (559)
.|++|=+.+.+ |- .-+++++.|.++++.-+|+-.|||..
T Consensus 78 -aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~ 129 (303)
T 2i6t_A 78 -SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVE 129 (303)
T ss_dssp -CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHH
T ss_pred -CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHH
Confidence 89988655443 10 13578888899999999888999983
No 83
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.16 E-value=0.46 Score=46.70 Aligned_cols=49 Identities=18% Similarity=0.279 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 283 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 283 LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
-.|++.+++-.|.+++..+++|+|||.+|.++|..+.. .| .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~-----~G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLS-----LD-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHH-----cC-------CEEEEEECC
Confidence 56778888888889999999999999888887777754 25 368888774
No 84
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=89.92 E-value=0.23 Score=50.65 Aligned_cols=128 Identities=16% Similarity=0.232 Sum_probs=71.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccc--cCCCCCHHHHhcc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE--HEPVNNLLDAVKV 377 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~--~~~~~~L~e~V~~ 377 (559)
.||.|+|||+.|.++|.++.. .|+ -+++|+|.+-=..+.-...+.+...++... -....++ ++++.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~-----~g~------~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~ 82 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ-----KDL------GDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQN 82 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCC
Confidence 589999999999999987765 365 139999985210000000111111111111 0011456 77775
Q ss_pred cCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccc--CCcEEEeeCC
Q 008629 378 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFASGS 441 (559)
Q Consensus 378 vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~EctpedA~~wt--~G~aifAsGS 441 (559)
.|++|=+.+.+ |. .-+++.+.+.++++.-+|+-.|||.+- . .+-+.+.+ .-.-+|++|+
T Consensus 83 --aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~--~-t~~~~~~~~~~~~rviG~~t 157 (328)
T 2hjr_A 83 --SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLDA--M-VYYFKEKSGIPANKVCGMSG 157 (328)
T ss_dssp --CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH--H-HHHHHHHHCCCGGGEEESCH
T ss_pred --CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchHH--H-HHHHHHhcCCChhhEEEeCc
Confidence 89888554333 21 245678888888888887667999842 2 23333322 2233556654
Q ss_pred CCC
Q 008629 442 PFD 444 (559)
Q Consensus 442 PF~ 444 (559)
+.+
T Consensus 158 ~Ld 160 (328)
T 2hjr_A 158 VLD 160 (328)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 85
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=89.88 E-value=3.3 Score=42.14 Aligned_cols=121 Identities=14% Similarity=0.157 Sum_probs=76.4
Q ss_pred CCCCeeecCCcc---hhHHHHHHHHHHHHHh-------------------------CCCcccceEEEeCcChHHHHHHHH
Q 008629 266 TTHLVFNDDIQG---TASVVLAGVVAALKLI-------------------------GGTLAEHRFLFLGAGEAGTGIAEL 317 (559)
Q Consensus 266 ~~~~~FnDDiQG---TaaV~LAgll~Alr~~-------------------------g~~l~d~riv~~GAGsAgiGia~l 317 (559)
..+++.|----. +|=-+++.+|+..|-. |..|...+|.|+|.|..|..+|+.
T Consensus 89 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~ 168 (334)
T 2dbq_A 89 RGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKR 168 (334)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCHHHHHHHHH
Confidence 456666643322 3334677777776521 457889999999999999999998
Q ss_pred HHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCC
Q 008629 318 IALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTF 393 (559)
Q Consensus 318 l~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~F 393 (559)
+.. .|. +++.+|+.. +. ... ..+ .-...+|.++++. .|+++=.-. ..+.+
T Consensus 169 l~~-----~G~-------~V~~~d~~~----~~----~~~-~~~---g~~~~~l~~~l~~--aDvVil~vp~~~~t~~~i 222 (334)
T 2dbq_A 169 AKG-----FNM-------RILYYSRTR----KE----EVE-REL---NAEFKPLEDLLRE--SDFVVLAVPLTRETYHLI 222 (334)
T ss_dssp HHH-----TTC-------EEEEECSSC----CH----HHH-HHH---CCEECCHHHHHHH--CSEEEECCCCCTTTTTCB
T ss_pred HHh-----CCC-------EEEEECCCc----ch----hhH-hhc---CcccCCHHHHHhh--CCEEEECCCCChHHHHhh
Confidence 864 263 588888741 10 000 011 0012478888885 888874432 12577
Q ss_pred CHHHHHHHHcCCCCcEEEecCC
Q 008629 394 TKEVIEAMASFNEKPLILALSN 415 (559)
Q Consensus 394 t~evv~~Ma~~~erPIIFaLSN 415 (559)
+++.++.|. +..+|.-.|.
T Consensus 223 ~~~~~~~mk---~~ailIn~sr 241 (334)
T 2dbq_A 223 NEERLKLMK---KTAILINIAR 241 (334)
T ss_dssp CHHHHHHSC---TTCEEEECSC
T ss_pred CHHHHhcCC---CCcEEEECCC
Confidence 888888885 5667776664
No 86
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=89.69 E-value=0.16 Score=51.42 Aligned_cols=105 Identities=17% Similarity=0.274 Sum_probs=62.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCC-CCHHHHhccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV-NNLLDAVKVI 378 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~-~~L~e~V~~v 378 (559)
.||.|+|||..|.++|-.+... |+ ...++++|.+--..+....++.+. .++....... .+..++++.
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-----~~-----~~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~~~al~~- 74 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-----GI-----ADEIVLIDANESKAIGDAMDFNHG-KVFAPKPVDIWHGDYDDCRD- 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCEEEECCGGGTTT-
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeEEEcCcHHHhCC-
Confidence 5999999999999999766542 54 257999998621111000012111 1111100000 123466664
Q ss_pred CCcEEEeccCCCC--------------CCCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 379 KPTILIGSSGVGR--------------TFTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 379 kPtvLIG~S~~~g--------------~Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
.|++|=+.+.+. ..-+++++.|.++++.-++|-.|||-
T Consensus 75 -aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv 126 (316)
T 1ldn_A 75 -ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPV 126 (316)
T ss_dssp -CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCch
Confidence 898886655443 12356788888888888888899998
No 87
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=89.68 E-value=0.88 Score=46.97 Aligned_cols=38 Identities=24% Similarity=0.482 Sum_probs=33.3
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 295 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 295 ~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.+|++.||+++|+|..|..+|..|+.+ |+ ++|.++|.+
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~a-----Gv------g~i~lvD~D 151 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATS-----GI------GEIILIDND 151 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEEECC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEECCC
Confidence 457789999999999999999998875 76 789999986
No 88
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=89.68 E-value=0.28 Score=50.94 Aligned_cols=37 Identities=27% Similarity=0.450 Sum_probs=33.4
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+|++.||+++|||..|..+|+.|+.+ |+ ++|.++|.+
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~a-----GV------g~ItlvD~D 67 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 67 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCC
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEecCC
Confidence 57889999999999999999999875 87 789999997
No 89
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=89.62 E-value=0.32 Score=49.55 Aligned_cols=101 Identities=17% Similarity=0.238 Sum_probs=63.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcC----CCchhchhhcccc--CCCCCHHH
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEH--EPVNNLLD 373 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~----~l~~~k~~fA~~~--~~~~~L~e 373 (559)
.||.|+|||+.|.++|.++.. .|+- +++|+|.+ .++-+ .+.+...+..... ....++ +
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~-----~g~~------~v~L~Di~----~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~ 68 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQ-----KNLG------DVVLFDIV----KNMPHGKALDTSHTNVMAYSNCKVSGSNTY-D 68 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSS----SSHHHHHHHHHHTHHHHHTCCCCEEEECCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEeCC----HHHHHHHHHHHHhhhhhcCCCcEEEECCCH-H
Confidence 489999999999999988875 3651 39999975 22110 1111100111110 011467 7
Q ss_pred HhcccCCcEEEeccCCC---CC----------------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 008629 374 AVKVIKPTILIGSSGVG---RT----------------FTKEVIEAMASFNEKPLILALSNPTS 418 (559)
Q Consensus 374 ~V~~vkPtvLIG~S~~~---g~----------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 418 (559)
+++. .|++|=+.+.+ |. .-+++.+.|.++++.-+|+=.|||.+
T Consensus 69 al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~ 130 (322)
T 1t2d_A 69 DLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVD 130 (322)
T ss_dssp GGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHH
T ss_pred HhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChH
Confidence 7875 89988664333 31 35678888888898888777799984
No 90
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=89.62 E-value=0.37 Score=47.47 Aligned_cols=49 Identities=24% Similarity=0.352 Sum_probs=39.7
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 283 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 283 LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
-.|++.+++..|..++..+++|+|||.+|.+++..|... | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~-----G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQA-----Q-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHT-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 467888888888899999999999998888888777642 4 468888874
No 91
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=89.17 E-value=0.27 Score=41.90 Aligned_cols=103 Identities=13% Similarity=0.173 Sum_probs=52.9
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc-ccCCCCCHHHH-
Q 008629 297 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA- 374 (559)
Q Consensus 297 l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~e~- 374 (559)
++..+|+|+|+|..|..+++.+.. .|. +++++|++. ++.+.+......+.. +..+...|.++
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~-----~g~-------~v~~~d~~~----~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 67 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHR-----MGH-------EVLAVDINE----EKVNAYASYATHAVIANATEENELLSLG 67 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHH-----TTC-------CCEEEESCH----HHHHTTTTTCSEEEECCTTCHHHHHTTT
T ss_pred CcCCcEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----HHHHHHHHhCCEEEEeCCCCHHHHHhcC
Confidence 455789999999999999888764 253 578888742 111112111111111 11111123332
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 375 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 375 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
++ ++|++|=+.+..-..+..+++...+.+...||...+||.
T Consensus 68 ~~--~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~ 108 (144)
T 2hmt_A 68 IR--NFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYY 108 (144)
T ss_dssp GG--GCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHH
T ss_pred CC--CCCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence 33 589998665532012234444444455556776666665
No 92
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=89.14 E-value=1.1 Score=45.28 Aligned_cols=112 Identities=20% Similarity=0.181 Sum_probs=67.3
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc
Q 008629 284 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 363 (559)
Q Consensus 284 Agll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~ 363 (559)
++.+++..... ....++.|+|+|..|-.+++.+... .++ ++++++|+. .+| ...+...|..
T Consensus 112 ~s~laa~~la~--~~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~----~~~---a~~la~~~~~ 172 (322)
T 1omo_A 112 AGGIAAKYLAR--KNSSVFGFIGCGTQAYFQLEALRRV----FDI------GEVKAYDVR----EKA---AKKFVSYCED 172 (322)
T ss_dssp HHHHHHHHHSC--TTCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHHH
T ss_pred HHHHHHHhccC--CCCCEEEEEcCcHHHHHHHHHHHHh----CCc------cEEEEECCC----HHH---HHHHHHHHHh
Confidence 34555555432 3567999999999998888877653 233 678888874 222 2233333321
Q ss_pred ---ccCCCCCHHHHhcccCCcEEEeccCCC-CCCCHHHHHHHHcCCCCcEEEecC--CCCCCCCCCHH
Q 008629 364 ---EHEPVNNLLDAVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALS--NPTSQSECTAE 425 (559)
Q Consensus 364 ---~~~~~~~L~e~V~~vkPtvLIG~S~~~-g~Ft~evv~~Ma~~~erPIIFaLS--NPt~~~Ectpe 425 (559)
+.. ..++.|++ . .|++|=++..+ ..|+.+.+ .+.-.|+.++ +|. +.|+.++
T Consensus 173 ~~~~~~-~~~~~e~v-~--aDvVi~aTp~~~pv~~~~~l------~~G~~V~~ig~~~p~-~~el~~~ 229 (322)
T 1omo_A 173 RGISAS-VQPAEEAS-R--CDVLVTTTPSRKPVVKAEWV------EEGTHINAIGADGPG-KQELDVE 229 (322)
T ss_dssp TTCCEE-ECCHHHHT-S--SSEEEECCCCSSCCBCGGGC------CTTCEEEECSCCSTT-CCCBCHH
T ss_pred cCceEE-ECCHHHHh-C--CCEEEEeeCCCCceecHHHc------CCCeEEEECCCCCCC-ccccCHH
Confidence 112 46799988 4 89998766533 23443322 2456888883 455 6777764
No 93
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=89.08 E-value=1.6 Score=42.85 Aligned_cols=81 Identities=20% Similarity=0.192 Sum_probs=55.7
Q ss_pred eccCCCCcHHHHHHHHcC------CCCeeecCCcchhHHHHHHHHHHHHHh-CCCcccceEEEeC-cChHHHHHHHHHHH
Q 008629 249 FEDFANHNAFELLAKYGT------THLVFNDDIQGTASVVLAGVVAALKLI-GGTLAEHRFLFLG-AGEAGTGIAELIAL 320 (559)
Q Consensus 249 ~EDf~~~~Af~lL~ryr~------~~~~FnDDiQGTaaV~LAgll~Alr~~-g~~l~d~riv~~G-AGsAgiGia~ll~~ 320 (559)
++-+.-..+.+++++-+. +..+| .|..|.- ..-.|++.+++-. +.+++..+++|.| +|.+|.+++..+.+
T Consensus 64 ~~G~~~~~~~~~~~~~~~~~~gavnt~~~-~~~~G~n-Td~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~~ 141 (287)
T 1lu9_A 64 VGGGDMAAGERVFEAVKKRFFGPFRVSCM-LDSNGSN-TTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAG 141 (287)
T ss_dssp EECSCHHHHHHHHHHHHHHCBTTBCCEEE-ECSTTHH-HHHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHHH
T ss_pred EccchHHHHHHHHHHHHHhcCCCeEEEEe-cCCCcCC-chHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 444444577788887653 23344 4455532 2456777888776 7889999999999 89888888888765
Q ss_pred HHHHhcCCChhhhcccEEEEccc
Q 008629 321 EISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 321 ~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.|. +++++|++
T Consensus 142 -----~G~-------~V~i~~R~ 152 (287)
T 1lu9_A 142 -----EGA-------EVVLCGRK 152 (287)
T ss_dssp -----TTC-------EEEEEESS
T ss_pred -----CcC-------EEEEEECC
Confidence 363 38888874
No 94
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=89.04 E-value=0.31 Score=49.77 Aligned_cols=106 Identities=15% Similarity=0.268 Sum_probs=63.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 378 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 378 (559)
..||.|+|||+.|..++-+|+.. ++ -..++|+|.+-=-.++...+|.+.. +|..+..-..+..++++.
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~i~~~~~~a~~~- 76 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLSNAL-PFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTTG-GGSCCCEEEECCGGGGGG-
T ss_pred CCEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHhHHHHHHHHHHH-HhcCCeEEEECCHHHhCC-
Confidence 36999999999999988876542 54 2679999984100000000122111 222111000134666776
Q ss_pred CCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 379 KPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 379 kPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
.|++|=+.+.+.. .-+++++.|.++++.-+|+-.|||.
T Consensus 77 -aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 128 (326)
T 2zqz_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp -CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 8999866655432 1245677778889999999999998
No 95
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=88.96 E-value=2 Score=40.90 Aligned_cols=92 Identities=11% Similarity=0.215 Sum_probs=60.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 378 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 378 (559)
..||.|+|+|..|..+|..|... |.. ...+++++|+. .++ +. + ....++.|+++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~----~~~------~g---~---~~~~~~~~~~~~- 58 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPS----KKN------TT---L---NYMSSNEELARH- 58 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSS----CCS------SS---S---EECSCHHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCC----ccc------Cc---e---EEeCCHHHHHhc-
Confidence 35899999999999999988753 520 01368888864 111 00 0 112467788875
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 008629 379 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 418 (559)
Q Consensus 379 kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 418 (559)
+|++| ++..+ ...+++++.+..+.+..+|+.++|..+
T Consensus 59 -~D~vi-~~v~~-~~~~~v~~~l~~~l~~~~vv~~~~gi~ 95 (262)
T 2rcy_A 59 -CDIIV-CAVKP-DIAGSVLNNIKPYLSSKLLISICGGLN 95 (262)
T ss_dssp -CSEEE-ECSCT-TTHHHHHHHSGGGCTTCEEEECCSSCC
T ss_pred -CCEEE-EEeCH-HHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 78777 33333 457888888876656667888888774
No 96
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=88.90 E-value=1 Score=45.27 Aligned_cols=113 Identities=16% Similarity=0.142 Sum_probs=64.1
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc
Q 008629 284 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 363 (559)
Q Consensus 284 Agll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~ 363 (559)
++.+++.... +....+|.|+|+|..|..++..+... .|. ++++++|+. .++ .......+..
T Consensus 122 ~~~la~~~la--~~~~~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----~~~---~~~l~~~~~~ 182 (312)
T 2i99_A 122 VSAIATKFLK--PPSSEVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----KEN---AEKFADTVQG 182 (312)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----HHH---HHHHHHHSSS
T ss_pred HHHHHHHHhC--CCCCcEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHhhC
Confidence 3455553332 45667999999999999998887653 253 578888763 111 2222222110
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCC-CCCCCHHHHHHHHcCCCCcEEEecCC--CCCCCCCCH
Q 008629 364 EHEPVNNLLDAVKVIKPTILIGSSGV-GRTFTKEVIEAMASFNEKPLILALSN--PTSQSECTA 424 (559)
Q Consensus 364 ~~~~~~~L~e~V~~vkPtvLIG~S~~-~g~Ft~evv~~Ma~~~erPIIFaLSN--Pt~~~Ectp 424 (559)
......++.|+++. +|++|=+... ..+|.++ ...+.-+|+.+|+ |. .-|+.+
T Consensus 183 ~~~~~~~~~e~v~~--aDiVi~atp~~~~v~~~~------~l~~g~~vi~~g~~~p~-~~el~~ 237 (312)
T 2i99_A 183 EVRVCSSVQEAVAG--ADVIITVTLATEPILFGE------WVKPGAHINAVGASRPD-WRELDD 237 (312)
T ss_dssp CCEECSSHHHHHTT--CSEEEECCCCSSCCBCGG------GSCTTCEEEECCCCSTT-CCSBCH
T ss_pred CeEEeCCHHHHHhc--CCEEEEEeCCCCcccCHH------HcCCCcEEEeCCCCCCC-ceeccH
Confidence 01123689999985 8988855432 2233332 1235568887743 43 355543
No 97
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=88.81 E-value=0.38 Score=48.92 Aligned_cols=105 Identities=12% Similarity=0.226 Sum_probs=63.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 379 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 379 (559)
.||.|+|||+.|..++-+|+.. ++ -..|+|+|.+-=-.++-..+|.+.. +|..+..-..+..++++.
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~v~~~~~~a~~~-- 72 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GI-----AEEFVIVDVVKDRTKGDALDLEDAQ-AFTAPKKIYSGEYSDCKD-- 72 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHGGG-GGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHHHHHHHHHHHHH-HhcCCeEEEECCHHHhCC--
Confidence 6999999999999988876542 54 2679999984100000000122211 232211000134566775
Q ss_pred CcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 380 PTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 380 PtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
.|++|=+.+.+.. .-+++++.|.++++.-+|+-.|||.
T Consensus 73 aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 124 (318)
T 1ez4_A 73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPV 124 (318)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcH
Confidence 8998865554421 2345677788899999999999998
No 98
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=88.80 E-value=0.33 Score=46.78 Aligned_cols=99 Identities=14% Similarity=0.236 Sum_probs=60.8
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHH
Q 008629 295 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 374 (559)
Q Consensus 295 ~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 374 (559)
.++...||.|+|+|..|..+|..+... |. +.++++|++ . +.+......+ ......++.|+
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~----~---~~~~~~~~~~--g~~~~~~~~~~ 65 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRT----E---ESARELAQKV--EAEYTTDLAEV 65 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSS----H---HHHHHHHHHT--TCEEESCGGGS
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCC----H---HHHHHHHHHc--CCceeCCHHHH
Confidence 345567999999999999999988653 53 237778763 1 1122221111 00112467777
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 008629 375 VKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 417 (559)
Q Consensus 375 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 417 (559)
++ ++|++|=+.. ... .+++++.+.... +..+|.-+||-.
T Consensus 66 ~~--~~Dvvi~av~-~~~-~~~v~~~l~~~~~~~~ivv~~s~~~ 105 (266)
T 3d1l_A 66 NP--YAKLYIVSLK-DSA-FAELLQGIVEGKREEALMVHTAGSI 105 (266)
T ss_dssp CS--CCSEEEECCC-HHH-HHHHHHHHHTTCCTTCEEEECCTTS
T ss_pred hc--CCCEEEEecC-HHH-HHHHHHHHHhhcCCCcEEEECCCCC
Confidence 76 4888884433 333 388888887644 567888888854
No 99
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=88.73 E-value=0.25 Score=52.87 Aligned_cols=127 Identities=13% Similarity=0.190 Sum_probs=75.3
Q ss_pred ceEEEeCcChH-HHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc--c-cCC---CCCHH
Q 008629 300 HRFLFLGAGEA-GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH--E-HEP---VNNLL 372 (559)
Q Consensus 300 ~riv~~GAGsA-giGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~--~-~~~---~~~L~ 372 (559)
.||.|+|||+. |.+++..|+.. ..++. ...++|+|.+-- ++|.+.+......+.. . ... ..++.
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~----~~ev~L~Di~~~--~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~ 78 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELP----VGELWLVDIPEG--KEKLEIVGALAKRMVEKAGVPIEIHLTLDRR 78 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCC----EEEEEEECCGGG--HHHHHHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCC----CCEEEEEEcCCC--hHHHHHHHHHHHHHHhhcCCCcEEEEeCCHH
Confidence 59999999997 55555555431 12442 367999998520 0211111111122211 0 111 24788
Q ss_pred HHhcccCCcEEEeccCCCCC----------------------------------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 008629 373 DAVKVIKPTILIGSSGVGRT----------------------------------FTKEVIEAMASFNEKPLILALSNPTS 418 (559)
Q Consensus 373 e~V~~vkPtvLIG~S~~~g~----------------------------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 418 (559)
++++. .|++|=+.+.++. .=+++++.|.++|+.-+|+-.|||..
T Consensus 79 eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvd 156 (450)
T 1s6y_A 79 RALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAG 156 (450)
T ss_dssp HHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred HHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHH
Confidence 99986 9999866665421 13588899999999999999999982
Q ss_pred CCCCCHHHHhcccCCcEEEeeC
Q 008629 419 QSECTAEEAYTWSKGRAIFASG 440 (559)
Q Consensus 419 ~~EctpedA~~wt~G~aifAsG 440 (559)
+..+-+++.+.-.-+|.+|
T Consensus 157 ---ivT~a~~k~~p~~rViG~c 175 (450)
T 1s6y_A 157 ---MVTEAVLRYTKQEKVVGLC 175 (450)
T ss_dssp ---HHHHHHHHHCCCCCEEECC
T ss_pred ---HHHHHHHHhCCCCCEEEeC
Confidence 2233344555332566654
No 100
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=88.63 E-value=0.54 Score=47.44 Aligned_cols=100 Identities=18% Similarity=0.412 Sum_probs=60.9
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCC----CchhchhhccccC-CCCCHHHHh
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS----LQHFKKPWAHEHE-PVNNLLDAV 375 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~----l~~~k~~fA~~~~-~~~~L~e~V 375 (559)
||.|+|||+.|.++|..+... |. ...++++|.+- ++.+. +.+. .++..... ...+ .+++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~-----~~~V~l~D~~~----~~~~~~~~~l~~~-~~~~~~~~i~~~d-~~~~ 65 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GF-----AREMVLIDVDK----KRAEGDALDLIHG-TPFTRRANIYAGD-YADL 65 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HHHHHHHHHHHHH-GGGSCCCEEEECC-GGGG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCCh----HHHHHHHHHHHhh-hhhcCCcEEEeCC-HHHh
Confidence 799999999999999887653 54 14799999751 11000 1100 01110000 0023 3456
Q ss_pred cccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 008629 376 KVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTS 418 (559)
Q Consensus 376 ~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 418 (559)
+ ..|++|=+...+.. .-+++++.|.++++.-+|+-.|||..
T Consensus 66 ~--~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 120 (319)
T 1a5z_A 66 K--GSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD 120 (319)
T ss_dssp T--TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred C--CCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHH
Confidence 5 48888755444431 12688889988888878888999984
No 101
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.51 E-value=0.47 Score=48.04 Aligned_cols=107 Identities=13% Similarity=0.250 Sum_probs=65.5
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhc-cccCCCCCHHHHhc
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-HEHEPVNNLLDAVK 376 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA-~~~~~~~~L~e~V~ 376 (559)
...||.|+|||..|..+|-.|+.. |+ -..++|+|.+-=..++...+|.+. .+|. ++..-..+..++++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~-----~~-----~~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a~~ 73 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ-----SI-----VDELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSDCH 73 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----CS-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGGGT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHHhC
Confidence 456999999999999988876542 54 257999997510000000012222 2332 11000013466777
Q ss_pred ccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 377 VIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 377 ~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
. .|++|=+.+.+.. .=+++++.|.++++.-+|+-.|||.
T Consensus 74 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (317)
T 3d0o_A 74 D--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPV 126 (317)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred C--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 5 8998866555432 1245777788899999999999998
No 102
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=88.40 E-value=0.32 Score=52.48 Aligned_cols=126 Identities=17% Similarity=0.258 Sum_probs=75.3
Q ss_pred cceEEEeCcChH-HHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhc-c-c-cCC---CCCH
Q 008629 299 EHRFLFLGAGEA-GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-H-E-HEP---VNNL 371 (559)
Q Consensus 299 d~riv~~GAGsA-giGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA-~-~-~~~---~~~L 371 (559)
..||.|+|||+. +.++|..|+.. ..++. -..++|+|.+- ++-+.+.+....+. . . ... ..++
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~---~~~l~----~~eV~L~Di~~----e~~~~~~~~~~~~l~~~~~~~~I~~t~D~ 96 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDH---LEEFP----IRKLKLYDNDK----ERQDRIAGACDVFIREKAPDIEFAATTDP 96 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHT---TTTSC----EEEEEEECSCH----HHHHHHHHHHHHHHHHHCTTSEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhC---CCCCC----CCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCCEEEEECCH
Confidence 469999999996 55566665431 01441 35799999852 22111111112221 1 1 111 2478
Q ss_pred HHHhcccCCcEEEeccCCCCC----------------------------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 372 LDAVKVIKPTILIGSSGVGRT----------------------------------FTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 372 ~e~V~~vkPtvLIG~S~~~g~----------------------------------Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
.++++. .|++|=+.+.++. .=+++++.|.++|+.-+|+-.|||.
T Consensus 97 ~eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPv 174 (472)
T 1u8x_X 97 EEAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPA 174 (472)
T ss_dssp HHHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCH
T ss_pred HHHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 899986 9998866655321 1358889999999999999999998
Q ss_pred CCCCCCHHHHhcccCCcEEEeeC
Q 008629 418 SQSECTAEEAYTWSKGRAIFASG 440 (559)
Q Consensus 418 ~~~EctpedA~~wt~G~aifAsG 440 (559)
. +..+-+++.+.-.-+|.+|
T Consensus 175 d---i~T~~~~k~~p~~rViG~c 194 (472)
T 1u8x_X 175 A---IVAEATRRLRPNSKILNIC 194 (472)
T ss_dssp H---HHHHHHHHHSTTCCEEECC
T ss_pred H---HHHHHHHHhCCCCCEEEeC
Confidence 2 2333344544333466554
No 103
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.31 E-value=0.45 Score=49.28 Aligned_cols=96 Identities=18% Similarity=0.303 Sum_probs=61.8
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccc----cCCCCCH
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE----HEPVNNL 371 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~----~~~~~~L 371 (559)
.+...+++|+|+|..|..+|+.+.. .|. +++.+|+. ..| +...+..+... .....++
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~-----~Ga-------~V~~~d~~----~~~---l~~~~~~~g~~~~~~~~~~~~l 225 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANG-----MGA-------TVTVLDIN----IDK---LRQLDAEFCGRIHTRYSSAYEL 225 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESC----HHH---HHHHHHHTTTSSEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeCC----HHH---HHHHHHhcCCeeEeccCCHHHH
Confidence 4778999999999999999988764 263 58888874 111 21111112110 0011357
Q ss_pred HHHhcccCCcEEEeccCCC-----CCCCHHHHHHHHcCCCCcEEEecCC
Q 008629 372 LDAVKVIKPTILIGSSGVG-----RTFTKEVIEAMASFNEKPLILALSN 415 (559)
Q Consensus 372 ~e~V~~vkPtvLIG~S~~~-----g~Ft~evv~~Ma~~~erPIIFaLSN 415 (559)
.+.++. .|++|.+...+ ..++++.++.|. +.-+|.=+|-
T Consensus 226 ~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk---~g~~iV~va~ 269 (377)
T 2vhw_A 226 EGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMK---PGAVLVDIAI 269 (377)
T ss_dssp HHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSC---TTCEEEEGGG
T ss_pred HHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCC---CCcEEEEEec
Confidence 787874 89999877544 357899998885 4456666663
No 104
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=88.16 E-value=3.7 Score=42.42 Aligned_cols=192 Identities=16% Similarity=0.109 Sum_probs=111.4
Q ss_pred CCCCeeecCC---cchhHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcChHHHHHHHHHHHH
Q 008629 266 TTHLVFNDDI---QGTASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 321 (559)
Q Consensus 266 ~~~~~FnDDi---QGTaaV~LAgll~Alr~---------------------~g~~l~d~riv~~GAGsAgiGia~ll~~~ 321 (559)
..+++.|--- +.+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|-.+|+.+..
T Consensus 116 ~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~- 194 (345)
T 4g2n_A 116 LGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARG- 194 (345)
T ss_dssp TTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHT-
T ss_pred CCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHH-
Confidence 4666666532 23455677888877763 2567899999999999999999999864
Q ss_pred HHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHH
Q 008629 322 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEV 397 (559)
Q Consensus 322 ~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~ev 397 (559)
.|+ +++.+|+... .... +.......+|.|+++. .|+++=.-- .-+.|+++.
T Consensus 195 ----~G~-------~V~~~dr~~~-------~~~~-----~~g~~~~~~l~ell~~--sDvV~l~~Plt~~T~~li~~~~ 249 (345)
T 4g2n_A 195 ----FGL-------AIHYHNRTRL-------SHAL-----EEGAIYHDTLDSLLGA--SDIFLIAAPGRPELKGFLDHDR 249 (345)
T ss_dssp ----TTC-------EEEEECSSCC-------CHHH-----HTTCEECSSHHHHHHT--CSEEEECSCCCGGGTTCBCHHH
T ss_pred ----CCC-------EEEEECCCCc-------chhh-----hcCCeEeCCHHHHHhh--CCEEEEecCCCHHHHHHhCHHH
Confidence 264 5888887521 0110 0011112579999985 898885432 237899999
Q ss_pred HHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCC-CCCceeCCeeeCccCccccccchhhHHHHHHhCC
Q 008629 398 IEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSP-FDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGA 476 (559)
Q Consensus 398 v~~Ma~~~erPIIFaLSNPt~~~EctpedA~~wt~G~aifAsGSP-F~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~~~a 476 (559)
++.|. +..|+.=.|+-..--|-.-.+|+ .+|+.-.| |-. |++- - .....-=+..|+.+-|=+|-....+
T Consensus 250 l~~mk---~gailIN~aRG~~vde~aL~~aL--~~g~i~gA-~LDVf~~E-P-~~~~pL~~~~nvilTPHia~~t~e~-- 319 (345)
T 4g2n_A 250 IAKIP---EGAVVINISRGDLINDDALIEAL--RSKHLFAA-GLDVFANE-P-AIDPRYRSLDNIFLTPHIGSATHET-- 319 (345)
T ss_dssp HHHSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEE-EESCCTTT-T-SCCTTGGGCTTEEECCSCTTCBHHH--
T ss_pred HhhCC---CCcEEEECCCCchhCHHHHHHHH--HhCCceEE-EecCCCCC-C-CCCchHHhCCCEEEcCccCcCCHHH--
Confidence 99996 67788877763322222222333 34654332 211 1100 0 0001112456888888765322211
Q ss_pred cccCHHHHHHHHHHHHhccC
Q 008629 477 IRVHDDMLLAASEALAKQVT 496 (559)
Q Consensus 477 ~~Itd~m~~aAA~aLA~~v~ 496 (559)
.+.|...+++-|.....
T Consensus 320 ---~~~~~~~~~~ni~~~l~ 336 (345)
T 4g2n_A 320 ---RDAMGWLLIQGIEALNQ 336 (345)
T ss_dssp ---HHHHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHHHHHHc
Confidence 24555666666665554
No 105
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=87.93 E-value=0.88 Score=45.69 Aligned_cols=100 Identities=21% Similarity=0.313 Sum_probs=60.1
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCC----chhchhhcccc--CCCCCHHHH
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL----QHFKKPWAHEH--EPVNNLLDA 374 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l----~~~k~~fA~~~--~~~~~L~e~ 374 (559)
||.|+|||..|.++|..+... ++ -..++++|.+- ++-+.+ .+....+.... ....++.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~~----~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~- 66 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVVE----GIPQGKALDMYESGPVGLFDTKVTGSNDYAD- 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSS----SHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hHHHHHHHhHHhhhhcccCCcEEEECCCHHH-
Confidence 799999999999999887642 22 25799999862 211111 11100010000 01135555
Q ss_pred hcccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 375 VKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 375 V~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
++. .|++|=+.+.+ |- .-+++.+.|.++++.-+|+-.|||-
T Consensus 67 l~~--aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~ 121 (310)
T 1guz_A 67 TAN--SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPL 121 (310)
T ss_dssp GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSH
T ss_pred HCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCch
Confidence 654 88887554432 22 1157778888888888888899997
No 106
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=87.86 E-value=0.54 Score=47.67 Aligned_cols=101 Identities=23% Similarity=0.354 Sum_probs=61.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcC----CCchhchhhccccCCCCCHHHHh
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHEPVNNLLDAV 375 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~----~l~~~k~~fA~~~~~~~~L~e~V 375 (559)
.||.|+|||..|..+|-+|+. .|+ -..++++|.+ .+|-+ +|.+.. +|.++..-..+-.+++
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~-----~~~-----~~ev~L~Di~----~~~~~g~~~dl~~~~-~~~~~~~i~~~~~~a~ 72 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL-----RQT-----ANELVLIDVF----KEKAIGEAMDINHGL-PFMGQMSLYAGDYSDV 72 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-----SSEEEEECCC-------CCHHHHHHTTSC-CCTTCEEEC--CGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCC----hHHHHHHHHHHHHhH-HhcCCeEEEECCHHHh
Confidence 589999999999998877654 254 2579999975 22211 111111 1211100001225566
Q ss_pred cccCCcEEEeccCCCCCC--------------CHHHHHHHHcCCCCcEEEecCCCC
Q 008629 376 KVIKPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 376 ~~vkPtvLIG~S~~~g~F--------------t~evv~~Ma~~~erPIIFaLSNPt 417 (559)
+. .|++|=+.+.+..- -+++++.|.++++.-+|+=.|||.
T Consensus 73 ~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (318)
T 1y6j_A 73 KD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPV 126 (318)
T ss_dssp TT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSH
T ss_pred CC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 65 89988655544211 168889999999999999999997
No 107
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=87.75 E-value=0.56 Score=47.61 Aligned_cols=38 Identities=21% Similarity=0.309 Sum_probs=34.4
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 295 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 295 ~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.+|++.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~a-----GV------G~i~lvD~D 69 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRC-----GI------GKLLLFDYD 69 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 478999999999999999999999876 76 789999987
No 108
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=87.69 E-value=0.53 Score=48.37 Aligned_cols=106 Identities=15% Similarity=0.255 Sum_probs=65.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 378 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 378 (559)
..||.|+|||..|..+|..|+.. |+ ...+.++|..-=..++-.-+|.+. .+|.....-..+..++++.
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~i~~~~~~a~~~- 76 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLEDA-LPFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGTT-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCChHHHHHHHhhHhhh-hhhcCCcEEEECcHHHhcC-
Confidence 46899999999999999888763 55 257999998310000000012222 1232111001233456665
Q ss_pred CCcEEEeccCCC---C-----CC------CHHHHHHHHcCCCCcEEEecCCCC
Q 008629 379 KPTILIGSSGVG---R-----TF------TKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 379 kPtvLIG~S~~~---g-----~F------t~evv~~Ma~~~erPIIFaLSNPt 417 (559)
.|++|=+.+.+ | +| -+++++.|.++++.-+|+-.|||.
T Consensus 77 -aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPv 128 (326)
T 3vku_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp -CSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSSH
T ss_pred -CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCch
Confidence 88877554433 1 23 368888999999999999999998
No 109
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=87.64 E-value=0.98 Score=48.46 Aligned_cols=101 Identities=11% Similarity=0.151 Sum_probs=63.1
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc-ccCCCCCHHHHh
Q 008629 297 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 375 (559)
Q Consensus 297 l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V 375 (559)
++..+|.|+|+|..|..+|..|.+ .|. +++++|+. .+ ........+.. ......++.|++
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~-----~G~-------~V~v~~r~----~~---~~~~l~~~~~~~gi~~~~s~~e~v 73 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIES-----RGY-------TVSIFNRS----RE---KTEEVIAENPGKKLVPYYTVKEFV 73 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS----HH---HHHHHHHHSTTSCEEECSSHHHHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHh-----CCC-------eEEEEeCC----HH---HHHHHHhhCCCCCeEEeCCHHHHH
Confidence 566789999999999999999875 364 57777763 11 12222111100 011135788888
Q ss_pred ccc-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 008629 376 KVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 417 (559)
Q Consensus 376 ~~v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 417 (559)
+.. +||++| ++-..+...+++++.+...- +..||.-+||-.
T Consensus 74 ~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 74 ESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred hCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 753 478777 45445456788888887554 356888888865
No 110
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=87.57 E-value=2.7 Score=42.99 Aligned_cols=92 Identities=15% Similarity=0.259 Sum_probs=63.7
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHH
Q 008629 294 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 373 (559)
Q Consensus 294 g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e 373 (559)
|..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. ... + . ...+|.|
T Consensus 159 ~~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~dr~~----~~---~~g----~-~---~~~~l~e 211 (333)
T 3ba1_A 159 TTKFSGKRVGIIGLGRIGLAVAERAEA-----FDC-------PISYFSRSK----KP---NTN----Y-T---YYGSVVE 211 (333)
T ss_dssp CCCCTTCCEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC----CT---TCC----S-E---EESCHHH
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEECCCc----hh---ccC----c-e---ecCCHHH
Confidence 467889999999999999999998864 364 588888642 11 110 1 0 1247889
Q ss_pred HhcccCCcEEEeccC----CCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 374 AVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 374 ~V~~vkPtvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
+++. .|+++=.-- ..+.++++.++.|. +..+|.-.|.-.
T Consensus 212 ll~~--aDvVil~vP~~~~t~~li~~~~l~~mk---~gailIn~srG~ 254 (333)
T 3ba1_A 212 LASN--SDILVVACPLTPETTHIINREVIDALG---PKGVLINIGRGP 254 (333)
T ss_dssp HHHT--CSEEEECSCCCGGGTTCBCHHHHHHHC---TTCEEEECSCGG
T ss_pred HHhc--CCEEEEecCCChHHHHHhhHHHHhcCC---CCCEEEECCCCc
Confidence 8885 898875421 23688889999885 566777666643
No 111
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=87.54 E-value=0.49 Score=41.65 Aligned_cols=31 Identities=23% Similarity=0.401 Sum_probs=25.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.|+|+|||.||+..|..|.+ .|+ ++.++|+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~-----~G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 49999999999999998876 376 47788864
No 112
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=87.38 E-value=1.4 Score=44.08 Aligned_cols=100 Identities=19% Similarity=0.206 Sum_probs=57.8
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc
Q 008629 284 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 363 (559)
Q Consensus 284 Agll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~ 363 (559)
.|++.+++..| +.|++|+|||.+|-+++..|... | .+|+++++. .+|.+.|. .+.-
T Consensus 107 ~Gf~~~L~~~~----~k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt----~~ka~~la----~~~~ 162 (269)
T 3phh_A 107 LGFYLSLKQKN----YQNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS----SRGLDFFQ----RLGC 162 (269)
T ss_dssp HHHHHHCC-------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----CTTHHHHH----HHTC
T ss_pred HHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC----HHHHHHHH----HCCC
Confidence 34566665433 78999999999998888887653 4 468888874 33321122 1110
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCC----CCCCHHHHH-HHHcCCCCcEEEecC-CC
Q 008629 364 EHEPVNNLLDAVKVIKPTILIGSSGVG----RTFTKEVIE-AMASFNEKPLILALS-NP 416 (559)
Q Consensus 364 ~~~~~~~L~e~V~~vkPtvLIG~S~~~----g~Ft~evv~-~Ma~~~erPIIFaLS-NP 416 (559)
......+| . ++|++|-++..| ..+.++.+. .+. +..+++=++ ||
T Consensus 163 ~~~~~~~l----~--~~DiVInaTp~Gm~~~~~l~~~~l~~~l~---~~~~v~D~vY~P 212 (269)
T 3phh_A 163 DCFMEPPK----S--AFDLIINATSASLHNELPLNKEVLKGYFK---EGKLAYDLAYGF 212 (269)
T ss_dssp EEESSCCS----S--CCSEEEECCTTCCCCSCSSCHHHHHHHHH---HCSEEEESCCSS
T ss_pred eEecHHHh----c--cCCEEEEcccCCCCCCCCCChHHHHhhCC---CCCEEEEeCCCC
Confidence 11111222 1 699999776654 147777555 344 456777654 44
No 113
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=87.23 E-value=3.7 Score=41.32 Aligned_cols=109 Identities=15% Similarity=0.179 Sum_probs=73.3
Q ss_pred hhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEE
Q 008629 278 TASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL 339 (559)
Q Consensus 278 TaaV~LAgll~Alr~------------------~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~l 339 (559)
+|=-+++.+|+..|- .|..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~-----~G~-------~V~~ 170 (307)
T 1wwk_A 103 VAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANA-----LGM-------NILL 170 (307)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEE
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHH-----CCC-------EEEE
Confidence 344467777777662 3467899999999999999999998864 264 5888
Q ss_pred EcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHHHHHcCCCCcEEEecCC
Q 008629 340 VDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSN 415 (559)
Q Consensus 340 vD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSN 415 (559)
+|+.. . . ...+ .+ .-...+|.|+++. .|+++=.-- ..+.++++.++.|. +.-++.=.|.
T Consensus 171 ~d~~~----~---~-~~~~-~~---g~~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~mk---~ga~lin~ar 233 (307)
T 1wwk_A 171 YDPYP----N---E-ERAK-EV---NGKFVDLETLLKE--SDVVTIHVPLVESTYHLINEERLKLMK---KTAILINTSR 233 (307)
T ss_dssp ECSSC----C---H-HHHH-HT---TCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHHHSC---TTCEEEECSC
T ss_pred ECCCC----C---h-hhHh-hc---CccccCHHHHHhh--CCEEEEecCCChHHhhhcCHHHHhcCC---CCeEEEECCC
Confidence 88641 1 0 0011 11 0111378898875 898885422 24678899999886 5668887776
No 114
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=87.13 E-value=0.52 Score=52.60 Aligned_cols=37 Identities=27% Similarity=0.450 Sum_probs=33.5
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+|++.||+++|||..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~a-----GV------G~ItLvD~D 359 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 359 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 57889999999999999999999875 87 789999997
No 115
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=87.00 E-value=4.4 Score=41.22 Aligned_cols=137 Identities=10% Similarity=0.092 Sum_probs=88.2
Q ss_pred eeeccCCCCcHHHHHHHHcCCCCeeecCCcc---hhHHHHHHHHHHHHH-------------------hCCCcccceEEE
Q 008629 247 IQFEDFANHNAFELLAKYGTTHLVFNDDIQG---TASVVLAGVVAALKL-------------------IGGTLAEHRFLF 304 (559)
Q Consensus 247 Iq~EDf~~~~Af~lL~ryr~~~~~FnDDiQG---TaaV~LAgll~Alr~-------------------~g~~l~d~riv~ 304 (559)
|+.--.+..|- ++-.--+..+.+.|---.. +|=-+++.+|+..|- .|..|.+.+|.|
T Consensus 73 I~~~~~G~d~i-d~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgI 151 (331)
T 1xdw_A 73 ILTRTAGTDHI-DKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGV 151 (331)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEE
T ss_pred EEEcccccccc-CHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEE
Confidence 55555555542 2212223567777753333 344478888887761 234688999999
Q ss_pred eCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEE
Q 008629 305 LGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILI 384 (559)
Q Consensus 305 ~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLI 384 (559)
+|.|..|..+|+.+... |+ +++.+|+.. .. . +. .++. ..+|.|+++. .|+++
T Consensus 152 iG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~~----~~-~-~~----~~~~----~~~l~ell~~--aDvV~ 203 (331)
T 1xdw_A 152 VGLGRIGRVAAQIFHGM-----GA-------TVIGEDVFE----IK-G-IE----DYCT----QVSLDEVLEK--SDIIT 203 (331)
T ss_dssp ECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC----CC-S-CT----TTCE----ECCHHHHHHH--CSEEE
T ss_pred ECcCHHHHHHHHHHHHC-----CC-------EEEEECCCc----cH-H-HH----hccc----cCCHHHHHhh--CCEEE
Confidence 99999999999988642 64 588888742 11 1 11 1111 2379998885 89988
Q ss_pred ecc----CCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 008629 385 GSS----GVGRTFTKEVIEAMASFNEKPLILALSN 415 (559)
Q Consensus 385 G~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSN 415 (559)
=.- ...++|+++.++.|. +..++.=+|.
T Consensus 204 ~~~p~t~~t~~li~~~~l~~mk---~ga~lin~sr 235 (331)
T 1xdw_A 204 IHAPYIKENGAVVTRDFLKKMK---DGAILVNCAR 235 (331)
T ss_dssp ECCCCCTTTCCSBCHHHHHTSC---TTEEEEECSC
T ss_pred EecCCchHHHHHhCHHHHhhCC---CCcEEEECCC
Confidence 641 234789999999886 5678887874
No 116
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=86.85 E-value=4 Score=42.25 Aligned_cols=175 Identities=15% Similarity=0.078 Sum_probs=102.1
Q ss_pred cCCCCeeecCCc---chhHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcChHHHHHHHHHHHH
Q 008629 265 GTTHLVFNDDIQ---GTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 321 (559)
Q Consensus 265 r~~~~~FnDDiQ---GTaaV~LAgll~Alr~--------------------~g~~l~d~riv~~GAGsAgiGia~ll~~~ 321 (559)
+..+.+.|---- .+|=-+++-+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 107 ~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~ 186 (351)
T 3jtm_A 107 AAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPF 186 (351)
T ss_dssp HTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGG
T ss_pred hcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHC
Confidence 345666664322 3344577778877752 25679999999999999999999988642
Q ss_pred HHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHH
Q 008629 322 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEV 397 (559)
Q Consensus 322 ~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~ev 397 (559)
|+ +++.+|+... .....+.. ......+|.|+++. .|+++=.- ..-+.|+++.
T Consensus 187 -----G~-------~V~~~dr~~~-------~~~~~~~~---g~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~ 242 (351)
T 3jtm_A 187 -----GC-------NLLYHDRLQM-------APELEKET---GAKFVEDLNEMLPK--CDVIVINMPLTEKTRGMFNKEL 242 (351)
T ss_dssp -----CC-------EEEEECSSCC-------CHHHHHHH---CCEECSCHHHHGGG--CSEEEECSCCCTTTTTCBSHHH
T ss_pred -----CC-------EEEEeCCCcc-------CHHHHHhC---CCeEcCCHHHHHhc--CCEEEECCCCCHHHHHhhcHHH
Confidence 65 4777876421 01111100 01113579999986 89888432 2336899999
Q ss_pred HHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCCcee-CCeeeCccCccccccchhhHHH
Q 008629 398 IEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLG 470 (559)
Q Consensus 398 v~~Ma~~~erPIIFaLSNPt~~~EctpedA~~wt~G~aifAsGSPF~pv~~-~G~~~~p~Q~NN~yiFPGlglG 470 (559)
++.|. +..+|.=.|+-..--|---.+|+ .+|+.-.|.--=|.+--. ... .--+..|+.+-|=++-.
T Consensus 243 l~~mk---~gailIN~aRG~~vde~aL~~aL--~~g~i~ga~lDV~~~EP~~~~~--pL~~~~nvilTPHia~~ 309 (351)
T 3jtm_A 243 IGKLK---KGVLIVNNARGAIMERQAVVDAV--ESGHIGGYSGDVWDPQPAPKDH--PWRYMPNQAMTPHTSGT 309 (351)
T ss_dssp HHHSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEEEESCCSSSSCCTTC--GGGTSTTBCCCCSCGGG
T ss_pred HhcCC---CCCEEEECcCchhhCHHHHHHHH--HhCCccEEEeCCCCCCCCCCCC--hhhcCCCEEECCcCCCC
Confidence 99996 67788877774322232233444 356644333222211100 000 01134578888876543
No 117
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=86.65 E-value=0.98 Score=45.88 Aligned_cols=104 Identities=21% Similarity=0.293 Sum_probs=64.8
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchh-hccccCCCCCHHHHhcc
Q 008629 300 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-WAHEHEPVNNLLDAVKV 377 (559)
Q Consensus 300 ~riv~~G-AGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~-fA~~~~~~~~L~e~V~~ 377 (559)
.||+|.| +|..|..++..|+. .|+ ...++++|.+.- .....+|.+...+ -.+......++.++++.
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~-----~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~g 76 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPL-----VSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTG 76 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTT-----EEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCC
Confidence 5899999 79999998887653 354 256999996421 0000001110000 00000011257788886
Q ss_pred cCCcEEEeccCCCC--------------CCCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 378 IKPTILIGSSGVGR--------------TFTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 378 vkPtvLIG~S~~~g--------------~Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
.|++|=+.+.+. ..++++++.|.+++.+.+|+--|||.
T Consensus 77 --aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv 128 (326)
T 1smk_A 77 --MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPV 128 (326)
T ss_dssp --CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred --CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCch
Confidence 899886655442 24677888888889889999999998
No 118
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=86.43 E-value=0.67 Score=46.52 Aligned_cols=98 Identities=23% Similarity=0.357 Sum_probs=55.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhch-hhcc----ccCCCCCHHH
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWAH----EHEPVNNLLD 373 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~-~fA~----~~~~~~~L~e 373 (559)
+.||.|+|+|+-|..+|..|..+ | .+++++|+.. .+.+.+..... .|-. ...-..++.|
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~~----~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 77 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARRK----EIVDLINVSHTSPYVEESKITVRATNDLEE 77 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSH----HHHHHHHHHSCBTTBTTCCCCSEEESCGGG
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCCH----HHHHHHHHhCCcccCCCCeeeEEEeCCHHH
Confidence 46999999999999999998763 5 3688887741 10000111000 0000 0001134555
Q ss_pred HhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCC
Q 008629 374 AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQ 419 (559)
Q Consensus 374 ~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~ 419 (559)
++ ..|++| ++..+ ...+++++.++. +..+|..++|..+.
T Consensus 78 -~~--~aDvVi-l~vk~-~~~~~v~~~l~~--~~~~vv~~~nGi~~ 116 (335)
T 1z82_A 78 -IK--KEDILV-IAIPV-QYIREHLLRLPV--KPSMVLNLSKGIEI 116 (335)
T ss_dssp -CC--TTEEEE-ECSCG-GGHHHHHTTCSS--CCSEEEECCCCCCT
T ss_pred -hc--CCCEEE-EECCH-HHHHHHHHHhCc--CCCEEEEEeCCCCC
Confidence 54 367665 33322 567777777654 55678889987653
No 119
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=86.30 E-value=0.96 Score=47.95 Aligned_cols=124 Identities=12% Similarity=0.169 Sum_probs=74.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHH-hcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcccc---CCCCCHHHHh
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISK-QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH---EPVNNLLDAV 375 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~-~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~---~~~~~L~e~V 375 (559)
.||.|+|||+. .+..++..+.. ..++. ...++|+|.+- +|-+.........++.. ....++.+++
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l~----~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v~~t~d~~~al 71 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDVR----IDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKVLISDTFEGAV 71 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTSC----CCEEEEECSCH----HHHHHHHHHHHHHHTTSSEEEECSSHHHHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCCC----cCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEEEEeCCHHHHh
Confidence 58999999995 55555444443 23442 36799999752 22110111111111110 1125788999
Q ss_pred cccCCcEEEeccCCCC---------------CC-------------------CHHHHHHHHcCCCCcEEEecCCCCCCCC
Q 008629 376 KVIKPTILIGSSGVGR---------------TF-------------------TKEVIEAMASFNEKPLILALSNPTSQSE 421 (559)
Q Consensus 376 ~~vkPtvLIG~S~~~g---------------~F-------------------t~evv~~Ma~~~erPIIFaLSNPt~~~E 421 (559)
+. .|++|=..++|+ ++ =.++++.|.++| .-+|+-.|||. .
T Consensus 72 ~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPv--d- 145 (417)
T 1up7_A 72 VD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPS--G- 145 (417)
T ss_dssp TT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSH--H-
T ss_pred CC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChH--H-
Confidence 86 999998777653 22 258899999999 99999999998 2
Q ss_pred CCHHHHhcccCCcEEEeeC
Q 008629 422 CTAEEAYTWSKGRAIFASG 440 (559)
Q Consensus 422 ctpedA~~wt~G~aifAsG 440 (559)
+..+-+++.+.-.-+|.+|
T Consensus 146 i~t~a~~k~~p~~rviG~c 164 (417)
T 1up7_A 146 HITEFVRNYLEYEKFIGLC 164 (417)
T ss_dssp HHHHHHHHTTCCSSEEECC
T ss_pred HHHHHHHHhCCCCCEEEeC
Confidence 2223344555332466654
No 120
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=86.24 E-value=0.8 Score=49.02 Aligned_cols=104 Identities=13% Similarity=0.122 Sum_probs=65.3
Q ss_pred chhHhHHHHHHHHHHhhCCCeeeeeccCCCCcHHHHHHHHc-CCCCee--ecCCcchhHHHHHHHHHHHHHhC-------
Q 008629 225 EYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYG-TTHLVF--NDDIQGTASVVLAGVVAALKLIG------- 294 (559)
Q Consensus 225 ~y~~~vdefv~av~~~fGp~~lIq~EDf~~~~Af~lL~ryr-~~~~~F--nDDiQGTaaV~LAgll~Alr~~g------- 294 (559)
-|-..+..+++.+...+ |+ |.|+-+....-.++-++|. ..+|++ |+..-+.+.....-|+..+....
T Consensus 130 ~~C~~~~~~l~~~a~~~-~~--v~~~~vd~~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~ 206 (521)
T 1hyu_A 130 HNCPDVVQALNLMAVLN-PR--IKHTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEA 206 (521)
T ss_dssp SSHHHHHHHHHHHHHHC-TT--EEEEEEETTTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHH
T ss_pred cCcHHHHHHHHHHHhHc-Cc--eEEEEEechhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhccccccccc
Confidence 34445666666666667 44 4444333334566778886 466644 66666777777777776653321
Q ss_pred -CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 295 -GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 295 -~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
..-...+|+|+|+|.||+..|..+.. .|+ ++.++|++
T Consensus 207 ~~~~~~~dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~~ 244 (521)
T 1hyu_A 207 LNKRDAYDVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGER 244 (521)
T ss_dssp HHTSCCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred ccccCcccEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 01234679999999999999988765 364 56777753
No 121
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=86.21 E-value=0.49 Score=46.90 Aligned_cols=103 Identities=14% Similarity=0.286 Sum_probs=61.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCc-hhchhhcccc--CCCCCHHHHh
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAHEH--EPVNNLLDAV 375 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~-~~k~~fA~~~--~~~~~L~e~V 375 (559)
..||.|+|||+.|..+|..|.. .|. ..+++++|++---... ..+. .+..++..+. ....+. +++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~-----~g~-----~~~V~l~d~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~-~~~ 73 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQ-----RGI-----AREIVLEDIAKERVEA--EVLDMQHGSSFYPTVSIDGSDDP-EIC 73 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHH--HHHHHHHTGGGSTTCEEEEESCG-GGG
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCChhHHHH--HHHHHHhhhhhcCCeEEEeCCCH-HHh
Confidence 3589999999999999988764 253 1479999986310000 0010 0111111110 000132 455
Q ss_pred cccCCcEEEeccCCCCCCCH----------------HHHHHHHcCCCCcEEEecCCCCC
Q 008629 376 KVIKPTILIGSSGVGRTFTK----------------EVIEAMASFNEKPLILALSNPTS 418 (559)
Q Consensus 376 ~~vkPtvLIG~S~~~g~Ft~----------------evv~~Ma~~~erPIIFaLSNPt~ 418 (559)
+ ..|++|=+.+.+. .+ ++++.|+++++..+|+.++||..
T Consensus 74 ~--~aD~Vii~v~~~~--~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~ 128 (319)
T 1lld_A 74 R--DADMVVITAGPRQ--KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD 128 (319)
T ss_dssp T--TCSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred C--CCCEEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchH
Confidence 5 4888875554332 23 88889988888889999999984
No 122
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=86.16 E-value=7.1 Score=39.30 Aligned_cols=117 Identities=20% Similarity=0.253 Sum_probs=78.5
Q ss_pred CCCCeeecC-Ccc--hhHHHHHHHHHHHHHh-----------------CCCcccceEEEeCcChHHHHHHHHHHHHHHHh
Q 008629 266 TTHLVFNDD-IQG--TASVVLAGVVAALKLI-----------------GGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 325 (559)
Q Consensus 266 ~~~~~FnDD-iQG--TaaV~LAgll~Alr~~-----------------g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~ 325 (559)
..+++.|-- ... +|=-+++.+|+..|-. +..|.+.++.|+|.|..|-.+|+.+..
T Consensus 71 ~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~----- 145 (303)
T 1qp8_A 71 PHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAA----- 145 (303)
T ss_dssp TTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHH-----
T ss_pred cCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHH-----
Confidence 467777643 222 2334788888876631 226889999999999999999998864
Q ss_pred cCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHHH
Q 008629 326 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAM 401 (559)
Q Consensus 326 ~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~M 401 (559)
.|+ +++.+|+..- +. .+ ....+|.|+++. .|+++=.- ...+.|+++.++.|
T Consensus 146 ~G~-------~V~~~dr~~~---------~~---~~----~~~~~l~ell~~--aDvV~l~~P~~~~t~~~i~~~~l~~m 200 (303)
T 1qp8_A 146 LGA-------QVRGFSRTPK---------EG---PW----RFTNSLEEALRE--ARAAVCALPLNKHTRGLVKYQHLALM 200 (303)
T ss_dssp TTC-------EEEEECSSCC---------CS---SS----CCBSCSHHHHTT--CSEEEECCCCSTTTTTCBCHHHHTTS
T ss_pred CCC-------EEEEECCCcc---------cc---Cc----ccCCCHHHHHhh--CCEEEEeCcCchHHHHHhCHHHHhhC
Confidence 264 5888887521 10 01 122478888885 89887553 23457888888877
Q ss_pred HcCCCCcEEEecCC
Q 008629 402 ASFNEKPLILALSN 415 (559)
Q Consensus 402 a~~~erPIIFaLSN 415 (559)
. +..++.=.|.
T Consensus 201 k---~gailin~sr 211 (303)
T 1qp8_A 201 A---EDAVFVNVGR 211 (303)
T ss_dssp C---TTCEEEECSC
T ss_pred C---CCCEEEECCC
Confidence 5 6678887776
No 123
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=86.16 E-value=0.72 Score=43.67 Aligned_cols=93 Identities=13% Similarity=0.184 Sum_probs=57.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEE-EcccCccccCCcCCCchhchhhccccCCCCCHHHHhccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL-VDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 378 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~l-vD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 378 (559)
.||.|+|+|..|..+|..+... |. ++.+ +|++ . +.+....+.+-. ....+..++++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-----g~-------~V~~v~~r~----~---~~~~~l~~~~g~--~~~~~~~~~~~~- 81 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-----QI-------PAIIANSRG----P---ASLSSVTDRFGA--SVKAVELKDALQ- 81 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-----TC-------CEEEECTTC----G---GGGHHHHHHHTT--TEEECCHHHHTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCC----H---HHHHHHHHHhCC--CcccChHHHHhc-
Confidence 5899999999999999988753 53 3554 5543 1 123222222210 111244566664
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 008629 379 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 418 (559)
Q Consensus 379 kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 418 (559)
+|++| ++..+ ...+++++.++. .+..+|+-++||..
T Consensus 82 -aDvVi-lavp~-~~~~~v~~~l~~-~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 82 -ADVVI-LAVPY-DSIADIVTQVSD-WGGQIVVDASNAID 117 (220)
T ss_dssp -SSEEE-EESCG-GGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred -CCEEE-EeCCh-HHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence 78877 33333 456778877765 45669999999874
No 124
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=85.98 E-value=2.2 Score=44.07 Aligned_cols=95 Identities=11% Similarity=0.216 Sum_probs=60.5
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccc-cCCCCCHHHHh
Q 008629 297 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAV 375 (559)
Q Consensus 297 l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~-~~~~~~L~e~V 375 (559)
++..||.|+|.|..|..+|..|... | -+++++|+. .+ .+. .++.. .....++.|++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~-----G-------~~V~v~dr~----~~---~~~----~l~~~g~~~~~s~~e~~ 76 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKG-----G-------HECVVYDLN----VN---AVQ----ALEREGIAGARSIEEFC 76 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC----HH---HHH----HHHTTTCBCCSSHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCC----HH---HHH----HHHHCCCEEeCCHHHHH
Confidence 3467999999999999999988763 5 357777763 11 111 12111 12235788888
Q ss_pred ccc-CCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEecCCC
Q 008629 376 KVI-KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNP 416 (559)
Q Consensus 376 ~~v-kPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNP 416 (559)
+.. +||++| ++...+ -.+++++.+... .+.-||.-+||-
T Consensus 77 ~~a~~~DvVi-~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~ 117 (358)
T 4e21_A 77 AKLVKPRVVW-LMVPAA-VVDSMLQRMTPLLAANDIVIDGGNS 117 (358)
T ss_dssp HHSCSSCEEE-ECSCGG-GHHHHHHHHGGGCCTTCEEEECSSC
T ss_pred hcCCCCCEEE-EeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCC
Confidence 764 568877 333333 678888887654 356678777773
No 125
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=85.90 E-value=3 Score=43.18 Aligned_cols=144 Identities=13% Similarity=0.161 Sum_probs=89.0
Q ss_pred eeeccCCCCcH-HHHHHHHcCCCCeeecCC---cchhHHHHHHHHHHHHH--------------------hCCCcccceE
Q 008629 247 IQFEDFANHNA-FELLAKYGTTHLVFNDDI---QGTASVVLAGVVAALKL--------------------IGGTLAEHRF 302 (559)
Q Consensus 247 Iq~EDf~~~~A-f~lL~ryr~~~~~FnDDi---QGTaaV~LAgll~Alr~--------------------~g~~l~d~ri 302 (559)
|+.-..+..|- .+.+.+.+..+.+.|--- +.+|=-+++.+|+..|- .+..|.+.+|
T Consensus 88 I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tv 167 (364)
T 2j6i_A 88 VVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTI 167 (364)
T ss_dssp EEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEE
T ss_pred EEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEE
Confidence 66655555553 222233222566666432 23344468888877662 3668999999
Q ss_pred EEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcE
Q 008629 303 LFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTI 382 (559)
Q Consensus 303 v~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtv 382 (559)
.|+|.|..|..+|+.+.. .|+ ++++.+|+... .....+ .+ ......+|.|+++. .|+
T Consensus 168 gIIG~G~IG~~vA~~l~~-----~G~------~~V~~~d~~~~-------~~~~~~-~~--g~~~~~~l~ell~~--aDv 224 (364)
T 2j6i_A 168 ATIGAGRIGYRVLERLVP-----FNP------KELLYYDYQAL-------PKDAEE-KV--GARRVENIEELVAQ--ADI 224 (364)
T ss_dssp EEECCSHHHHHHHHHHGG-----GCC------SEEEEECSSCC-------CHHHHH-HT--TEEECSSHHHHHHT--CSE
T ss_pred EEECcCHHHHHHHHHHHh-----CCC------cEEEEECCCcc-------chhHHH-hc--CcEecCCHHHHHhc--CCE
Confidence 999999999999998864 264 23888876411 111111 11 00112479998874 899
Q ss_pred EEeccCC----CCCCCHHHHHHHHcCCCCcEEEecCCC
Q 008629 383 LIGSSGV----GRTFTKEVIEAMASFNEKPLILALSNP 416 (559)
Q Consensus 383 LIG~S~~----~g~Ft~evv~~Ma~~~erPIIFaLSNP 416 (559)
++=.--. .++|+++.++.|. +.-+|.-.|+-
T Consensus 225 V~l~~P~t~~t~~li~~~~l~~mk---~ga~lIn~arG 259 (364)
T 2j6i_A 225 VTVNAPLHAGTKGLINKELLSKFK---KGAWLVNTARG 259 (364)
T ss_dssp EEECCCCSTTTTTCBCHHHHTTSC---TTEEEEECSCG
T ss_pred EEECCCCChHHHHHhCHHHHhhCC---CCCEEEECCCC
Confidence 8854322 2688998888886 66788878773
No 126
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=85.85 E-value=0.59 Score=47.20 Aligned_cols=104 Identities=20% Similarity=0.246 Sum_probs=64.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcccc--CCCCCHHHHhccc
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKVI 378 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~--~~~~~L~e~V~~v 378 (559)
||.|+|||..|.++|-.|... |+ ...+.|+|.+-=..++-.-+|.+...+|-... ....+ .++++.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~-----~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~- 69 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCC-
Confidence 799999999999999887653 54 14799999752111100001222211121110 00134 677875
Q ss_pred CCcEEEeccCCC---CC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 008629 379 KPTILIGSSGVG---RT-----F------TKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 379 kPtvLIG~S~~~---g~-----F------t~evv~~Ma~~~erPIIFaLSNPt 417 (559)
.|++|=+.+.+ |- | -+++++.|.++++.-+|+-.|||.
T Consensus 70 -aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPv 121 (294)
T 1oju_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp -CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred -CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcc
Confidence 88887554443 32 1 256778888999999999999998
No 127
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=85.82 E-value=0.67 Score=45.86 Aligned_cols=49 Identities=22% Similarity=0.261 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 282 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 282 ~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
...|++.+++..+.++++.+++|+|||.+|.++|..|.. .| +++++|++
T Consensus 111 d~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~~-----~G--------~V~v~~r~ 159 (287)
T 1nvt_A 111 DGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAK-----DN--------NIIIANRT 159 (287)
T ss_dssp HHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTS-----SS--------EEEEECSS
T ss_pred CHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHH-----CC--------CEEEEECC
Confidence 678999999988889999999999998666666655543 23 68888774
No 128
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=85.79 E-value=0.62 Score=51.85 Aligned_cols=38 Identities=26% Similarity=0.439 Sum_probs=33.9
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 295 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 295 ~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.+|++.||+++|||..|..||..|+.+ |+ ++|.++|.+
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 478899999999999999999998864 86 799999987
No 129
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=85.77 E-value=5.4 Score=40.27 Aligned_cols=117 Identities=18% Similarity=0.184 Sum_probs=78.5
Q ss_pred CCCCeeecCCc---chhHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcChHHHHHHHHHHHH
Q 008629 266 TTHLVFNDDIQ---GTASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 321 (559)
Q Consensus 266 ~~~~~FnDDiQ---GTaaV~LAgll~Alr~---------------------~g~~l~d~riv~~GAGsAgiGia~ll~~~ 321 (559)
..+.+.|---- .+|=-+++.+|+..|- .|..+.+.+|.|+|.|..|..+|+.+..
T Consensus 87 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~- 165 (311)
T 2cuk_A 87 RGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALA- 165 (311)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHH-
T ss_pred CCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHH-
Confidence 34555554322 2334467777777652 1457889999999999999999998864
Q ss_pred HHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHH
Q 008629 322 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEV 397 (559)
Q Consensus 322 ~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~ev 397 (559)
.|+ +++.+|+.. .. .. + ...+|.|+++. .|+++=.- ...+.++++.
T Consensus 166 ----~G~-------~V~~~d~~~----~~---~~------~----~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~ 215 (311)
T 2cuk_A 166 ----FGM-------RVVYHARTP----KP---LP------Y----PFLSLEELLKE--ADVVSLHTPLTPETHRLLNRER 215 (311)
T ss_dssp ----TTC-------EEEEECSSC----CS---SS------S----CBCCHHHHHHH--CSEEEECCCCCTTTTTCBCHHH
T ss_pred ----CCC-------EEEEECCCC----cc---cc------c----ccCCHHHHHhh--CCEEEEeCCCChHHHhhcCHHH
Confidence 264 588888741 11 11 1 12478898886 89888652 2246788888
Q ss_pred HHHHHcCCCCcEEEecCCC
Q 008629 398 IEAMASFNEKPLILALSNP 416 (559)
Q Consensus 398 v~~Ma~~~erPIIFaLSNP 416 (559)
++.|. +..++.=.|.-
T Consensus 216 l~~mk---~ga~lin~srg 231 (311)
T 2cuk_A 216 LFAMK---RGAILLNTARG 231 (311)
T ss_dssp HTTSC---TTCEEEECSCG
T ss_pred HhhCC---CCcEEEECCCC
Confidence 87775 67788888873
No 130
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=85.76 E-value=9.3 Score=40.16 Aligned_cols=191 Identities=16% Similarity=0.145 Sum_probs=108.8
Q ss_pred cCCCCeeecCCc---chhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHH
Q 008629 265 GTTHLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 323 (559)
Q Consensus 265 r~~~~~FnDDiQ---GTaaV~LAgll~Alr~------------------~g~~l~d~riv~~GAGsAgiGia~ll~~~~~ 323 (559)
+..+++||---- .+|=-++|.+|+..|- .|..|.+.++.|+|-|..|..+|+.+...
T Consensus 90 ~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~~-- 167 (404)
T 1sc6_A 90 KRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESL-- 167 (404)
T ss_dssp HTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred hCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHHHHC--
Confidence 356778875433 3455578888888763 25679999999999999999999988652
Q ss_pred HhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHH
Q 008629 324 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIE 399 (559)
Q Consensus 324 ~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~ 399 (559)
|+ +++.+|+.. . ..+. -+ ....+|.|+++. .|+++=.- ..-+.|+++.++
T Consensus 168 ---G~-------~V~~~d~~~----~--~~~~-----~~---~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~ 221 (404)
T 1sc6_A 168 ---GM-------YVYFYDIEN----K--LPLG-----NA---TQVQHLSDLLNM--SDVVSLHVPENPSTKNMMGAKEIS 221 (404)
T ss_dssp ---TC-------EEEEECSSC----C--CCCT-----TC---EECSCHHHHHHH--CSEEEECCCSSTTTTTCBCHHHHH
T ss_pred ---CC-------EEEEEcCCc----h--hccC-----Cc---eecCCHHHHHhc--CCEEEEccCCChHHHHHhhHHHHh
Confidence 65 588888742 1 1010 01 112478898886 88887542 223688999998
Q ss_pred HHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEE------EeeCCCCCCceeCCeeeCccCccccccchhhHHHHHH
Q 008629 400 AMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAI------FASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVI 473 (559)
Q Consensus 400 ~Ma~~~erPIIFaLSNPt~~~EctpedA~~wt~G~ai------fAsGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~ 473 (559)
.|. +.-++.=.|.=.---|---.+|+ ..|+.- |.. -|.++-+. ....-=+..|+.+-|=+|-...-
T Consensus 222 ~mk---~ga~lIN~aRg~~vd~~aL~~aL--~~g~i~gA~lDVf~~-EP~~~~~~--~~~pL~~~~nvilTPHi~~~T~e 293 (404)
T 1sc6_A 222 LMK---PGSLLINASRGTVVDIPALADAL--ASKHLAGAAIDVFPT-EPATNSDP--FTSPLAEFDNVLLTPHIGGSTQE 293 (404)
T ss_dssp HSC---TTEEEEECSCSSSBCHHHHHHHH--HTTSEEEEEEEC----------CT--TTGGGTTCTTEEEECCCSCCSHH
T ss_pred hcC---CCeEEEECCCChHHhHHHHHHHH--HcCCccEEEEeecCC-CCCCcccc--ccchhhcCCCEEECCCCCCCcHH
Confidence 886 56788877753211111112333 345532 221 12110000 00001135688999977633222
Q ss_pred hCCcccCHHHHHHHHHHHHhccC
Q 008629 474 SGAIRVHDDMLLAASEALAKQVT 496 (559)
Q Consensus 474 ~~a~~Itd~m~~aAA~aLA~~v~ 496 (559)
+ -+.|...+++.|.....
T Consensus 294 a-----~~~~~~~~~~nl~~~l~ 311 (404)
T 1sc6_A 294 A-----QENIGLEVAGKLIKYSD 311 (404)
T ss_dssp H-----HHHHHHHHHHHHHHHHH
T ss_pred H-----HHHHHHHHHHHHHHHHc
Confidence 2 13455556666666554
No 131
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=85.71 E-value=1.1 Score=44.73 Aligned_cols=48 Identities=8% Similarity=0.155 Sum_probs=36.1
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 284 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 284 Agll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.|+..+++..|.. ...+++|+|||.+|-+++..|.. .|. ++|+++++.
T Consensus 105 ~G~~~~l~~~~~~-~~~~vlvlGaGgaarav~~~L~~-----~G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKN-----SGF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TTSCEEEECSSTTHHHHHHHHHH-----TTC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 4566666665654 56899999999999999888765 365 679988774
No 132
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=85.64 E-value=0.55 Score=45.87 Aligned_cols=37 Identities=24% Similarity=0.444 Sum_probs=32.1
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+|++.||+|+|+|..|..+|+.|+.+ |+ ++|.++|.+
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d 64 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFD 64 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCC
Confidence 45678999999999999999999875 76 689999997
No 133
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=85.61 E-value=1.5 Score=42.04 Aligned_cols=98 Identities=15% Similarity=0.234 Sum_probs=59.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 379 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 379 (559)
.||.|+|+|..|..+|..|... |.. ...+++++|++ . +.+...++.+ ......++.|+++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~---~~~~V~~~~r~----~---~~~~~~~~~~--g~~~~~~~~e~~~~-- 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIV---SSNQIICSDLN----T---ANLKNASEKY--GLTTTTDNNEVAKN-- 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----H---HHHHHHHHHH--CCEECSCHHHHHHH--
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCC---CCCeEEEEeCC----H---HHHHHHHHHh--CCEEeCChHHHHHh--
Confidence 4899999999999999988763 531 12478888873 1 1122222211 11123578898886
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 008629 380 PTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 418 (559)
Q Consensus 380 PtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 418 (559)
+|++| ++..+ .-.+++++.+..+. +..+|...++-.+
T Consensus 64 aDvVi-lav~~-~~~~~v~~~l~~~l~~~~~vvs~~~gi~ 101 (247)
T 3gt0_A 64 ADILI-LSIKP-DLYASIINEIKEIIKNDAIIVTIAAGKS 101 (247)
T ss_dssp CSEEE-ECSCT-TTHHHHC---CCSSCTTCEEEECSCCSC
T ss_pred CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 88887 33333 45678888776543 4557777777664
No 134
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=85.47 E-value=1.1 Score=45.14 Aligned_cols=104 Identities=20% Similarity=0.288 Sum_probs=61.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcccc--CCCCCHHHHhcc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKV 377 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~--~~~~~L~e~V~~ 377 (559)
.||.|+|||..|.++|-.+.. .|+ . + ++|+|.+-=-.+....+|.+...+..... ....++ ++++.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~-~-v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~ 70 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G-D-IVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTAN 70 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S-E-EEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C-e-EEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCC
Confidence 489999999999999987754 364 1 3 99999751000000001211110010110 001456 67775
Q ss_pred cCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 378 IKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 378 vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
.|++|=+.+.+.. .-+++.+.+.++++.-+|+-.|||.
T Consensus 71 --aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv 122 (309)
T 1ur5_A 71 --SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL 122 (309)
T ss_dssp --CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSH
T ss_pred --CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCch
Confidence 8998866544421 1246788888889888888789998
No 135
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=85.46 E-value=1.2 Score=44.54 Aligned_cols=98 Identities=15% Similarity=0.187 Sum_probs=58.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC--------ccccCCcCCCchhchhhccccCCCCCH
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG--------LIVSSRKDSLQHFKKPWAHEHEPVNNL 371 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G--------Li~~~R~~~l~~~k~~fA~~~~~~~~L 371 (559)
.||.|+|+|+-|..+|..|... | .+++++|+.- +...++ ....++ + ++..-..++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~~~i~~~Gl~~~~~--~~g~~~--~-~~~~~~~~~ 65 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDYETVKAKGIRIRSA--TLGDYT--F-RPAAVVRSA 65 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTHHHHHHHCEEEEET--TTCCEE--E-CCSCEESCG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChHHHHHhCCcEEeec--CCCcEE--E-eeeeeECCH
Confidence 4899999999999999888653 5 3688888753 111110 000010 0 000111345
Q ss_pred HHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 008629 372 LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 418 (559)
Q Consensus 372 ~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 418 (559)
.++.+ .+|++| ++... ..++++++.++.+. +..+|+.+.|--.
T Consensus 66 ~~~~~--~~DlVi-lavK~-~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 66 AELET--KPDCTL-LCIKV-VEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp GGCSS--CCSEEE-ECCCC-CTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred HHcCC--CCCEEE-EecCC-CChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 55543 478877 55444 34678999987643 4567888999764
No 136
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=85.20 E-value=4.7 Score=41.09 Aligned_cols=91 Identities=15% Similarity=0.169 Sum_probs=60.5
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHH
Q 008629 295 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 374 (559)
Q Consensus 295 ~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 374 (559)
..|.+.+|.|+|.|..|..+|+.+.. .|. +++.+|+.. .. ...+..-+. ..+|.++
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~d~~~----~~----~~~~~~g~~----~~~l~e~ 197 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIP-----FGV-------KLYYWSRHR----KV----NVEKELKAR----YMDIDEL 197 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSC----CH----HHHHHHTEE----ECCHHHH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCCc----ch----hhhhhcCce----ecCHHHH
Confidence 67999999999999999999998754 363 588888741 10 111100011 1378888
Q ss_pred hcccCCcEEEeccCC----CCCCCHHHHHHHHcCCCCcEEEecCC
Q 008629 375 VKVIKPTILIGSSGV----GRTFTKEVIEAMASFNEKPLILALSN 415 (559)
Q Consensus 375 V~~vkPtvLIG~S~~----~g~Ft~evv~~Ma~~~erPIIFaLSN 415 (559)
++. .|+++=.-.. .+.++++.++.|. +. ++.-.|.
T Consensus 198 l~~--aDiVil~vp~~~~t~~~i~~~~~~~mk---~g-ilin~sr 236 (333)
T 2d0i_A 198 LEK--SDIVILALPLTRDTYHIINEERVKKLE---GK-YLVNIGR 236 (333)
T ss_dssp HHH--CSEEEECCCCCTTTTTSBCHHHHHHTB---TC-EEEECSC
T ss_pred Hhh--CCEEEEcCCCChHHHHHhCHHHHhhCC---CC-EEEECCC
Confidence 875 8988744321 3578888888885 45 7766664
No 137
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=85.19 E-value=0.4 Score=48.58 Aligned_cols=105 Identities=18% Similarity=0.298 Sum_probs=62.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 379 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 379 (559)
.||.|+|||+.|..++-+|+. .++ -..++|+|.+-=-.++...+|.+. .+|.++..-..+-.++++.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~-----~~~-----~~el~L~Di~~~k~~g~a~dl~~~-~~~~~~~~v~~~~~~a~~~-- 67 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALAL-----LGV-----AREVVLVDLDRKLAQAHAEDILHA-TPFAHPVWVWAGSYGDLEG-- 67 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCChhHHHHHHHHHHHh-HhhcCCeEEEECCHHHhCC--
Confidence 389999999999998877654 244 257999998520000000012211 1222110000122566765
Q ss_pred CcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 380 PTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 380 PtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
.|++|=+.+.+ |- .-+++++.|.+++..-+|+-.|||.
T Consensus 68 aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (310)
T 2xxj_A 68 ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPV 119 (310)
T ss_dssp EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 88888554444 32 1245777788889999999999998
No 138
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=85.13 E-value=1.1 Score=45.83 Aligned_cols=106 Identities=17% Similarity=0.323 Sum_probs=64.5
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCC---CCHHH
Q 008629 297 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV---NNLLD 373 (559)
Q Consensus 297 l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~---~~L~e 373 (559)
++..||.|+|||..|.++|..|.. .|+ + .+.|+|.+-=..++-..+|.+. ..|....... .+. +
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~-----~~~----~--~v~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~t~d~-~ 71 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGL-----KEL----G--DVVLFDIAEGTPQGKGLDIAES-SPVDGFDAKFTGANDY-A 71 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHHH-HHHHTCCCCEEEESSG-G
T ss_pred CcCCEEEEECCCHHHHHHHHHHHh-----CCC----C--eEEEEeCCchhHHHHHHHHhch-hhhcCCCCEEEEeCCH-H
Confidence 456799999999999999988765 365 2 5999997521100000012221 1122111111 344 7
Q ss_pred HhcccCCcEEEeccCCC---CC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 008629 374 AVKVIKPTILIGSSGVG---RT-----F------TKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 374 ~V~~vkPtvLIG~S~~~---g~-----F------t~evv~~Ma~~~erPIIFaLSNPt 417 (559)
+++. .|++|=+.+.+ |. | =+++++.|.++++.-+|+-.|||.
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPv 127 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPL 127 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCc
Confidence 7875 89887554433 32 1 256777888899999999999998
No 139
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=84.96 E-value=1.4 Score=47.62 Aligned_cols=98 Identities=13% Similarity=0.181 Sum_probs=58.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhch-hhc-cccCCCCCHHHHhcc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA-HEHEPVNNLLDAVKV 377 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~-~fA-~~~~~~~~L~e~V~~ 377 (559)
.+|.|+|+|..|.++|..|... |. +++++|+. .+ .+..... ... .......++.|+++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~----~~---~~~~l~~~~~~~~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRT----QS---KVDHFLANEAKGKSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----SH---HHHHHHHTTTTTSSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCC----HH---HHHHHHcccccCCCeEEeCCHHHHHhc
Confidence 4899999999999999998763 64 57778764 11 1111111 000 001123568887764
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 008629 378 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 417 (559)
Q Consensus 378 v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 417 (559)
. +||++| ++-..+...+++++.+..+. +..||.-+||-.
T Consensus 72 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 72 LKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp SCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred CCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 3 377766 44434445677777776543 345777788743
No 140
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=84.83 E-value=5.2 Score=41.24 Aligned_cols=131 Identities=15% Similarity=0.180 Sum_probs=76.1
Q ss_pred CCCCeeecCC---cchhHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcChHHHHHHHHHHHHH
Q 008629 266 TTHLVFNDDI---QGTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEI 322 (559)
Q Consensus 266 ~~~~~FnDDi---QGTaaV~LAgll~Alr~--------------------~g~~l~d~riv~~GAGsAgiGia~ll~~~~ 322 (559)
..+++.|--- ..+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+..
T Consensus 115 ~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~-- 192 (340)
T 4dgs_A 115 RNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEA-- 192 (340)
T ss_dssp TTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHT--
T ss_pred CCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHH--
Confidence 3455555322 12444567777777652 2467899999999999999999998864
Q ss_pred HHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHH
Q 008629 323 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVI 398 (559)
Q Consensus 323 ~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv 398 (559)
.|+ +++.+|+.. .+. . .+. ...+|.|+++. .|+++=.-- .-+.++++.+
T Consensus 193 ---~G~-------~V~~~dr~~----~~~--~-----~~~----~~~sl~ell~~--aDvVil~vP~t~~t~~li~~~~l 245 (340)
T 4dgs_A 193 ---FGM-------SVRYWNRST----LSG--V-----DWI----AHQSPVDLARD--SDVLAVCVAASAATQNIVDASLL 245 (340)
T ss_dssp ---TTC-------EEEEECSSC----CTT--S-----CCE----ECSSHHHHHHT--CSEEEECC----------CHHHH
T ss_pred ---CCC-------EEEEEcCCc----ccc--c-----Cce----ecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhHHHH
Confidence 365 578788641 110 1 111 12579999986 898884422 2367889999
Q ss_pred HHHHcCCCCcEEEecCCCCCCCCCCHHHHh
Q 008629 399 EAMASFNEKPLILALSNPTSQSECTAEEAY 428 (559)
Q Consensus 399 ~~Ma~~~erPIIFaLSNPt~~~EctpedA~ 428 (559)
+.|. +.-++.=.|.-..--|-.-.+|+
T Consensus 246 ~~mk---~gailIN~aRG~vvde~aL~~aL 272 (340)
T 4dgs_A 246 QALG---PEGIVVNVARGNVVDEDALIEAL 272 (340)
T ss_dssp HHTT---TTCEEEECSCC------------
T ss_pred hcCC---CCCEEEECCCCcccCHHHHHHHH
Confidence 9886 66788878775433343344444
No 141
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=84.61 E-value=1.3 Score=45.51 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=26.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
-.||.|+|||..|.|||..++.+ |+ ++.++|.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~~ 38 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 46899999999999999888763 75 57788753
No 142
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=84.57 E-value=2.4 Score=41.76 Aligned_cols=94 Identities=13% Similarity=0.141 Sum_probs=56.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc--cCccccCCcCCCchhchhhc--------cccCCCC-
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSSRKDSLQHFKKPWA--------HEHEPVN- 369 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~--~GLi~~~R~~~l~~~k~~fA--------~~~~~~~- 369 (559)
||.|+|+|..|..+|..|... | .+++++|+ +.-- ++..++... .......
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~ 62 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTEI-------LKSISAGREHPRLGVKLNGVEIFWP 62 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHHH-------HHHHHTTCCBTTTTBCCCSEEEECG
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHHH-------HHHHHHhCcCcccCccccceEEecH
Confidence 799999999999999988753 5 36888887 3110 111110000 0000112
Q ss_pred -CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 370 -NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 370 -~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
++.|+++. +|++|= +..+ -..+++++.++...+..+|..++|-.
T Consensus 63 ~~~~~~~~~--~D~vi~-~v~~-~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 63 EQLEKCLEN--AEVVLL-GVST-DGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp GGHHHHHTT--CSEEEE-CSCG-GGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred HhHHHHHhc--CCEEEE-cCCh-HHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 57777764 787773 3323 25788888876533456788888865
No 143
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=84.39 E-value=3.3 Score=43.20 Aligned_cols=161 Identities=14% Similarity=0.064 Sum_probs=91.5
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHH
Q 008629 294 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 373 (559)
Q Consensus 294 g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e 373 (559)
+..|.+.++.|+|.|..|-.+|+.+.. .|+ +++.+|+.. . .......-+ ...+|.|
T Consensus 171 ~~~l~gktvGIIGlG~IG~~vA~~l~~-----fG~-------~V~~~d~~~----~----~~~~~~~g~----~~~~l~e 226 (365)
T 4hy3_A 171 ARLIAGSEIGIVGFGDLGKALRRVLSG-----FRA-------RIRVFDPWL----P----RSMLEENGV----EPASLED 226 (365)
T ss_dssp CCCSSSSEEEEECCSHHHHHHHHHHTT-----SCC-------EEEEECSSS----C----HHHHHHTTC----EECCHHH
T ss_pred ccccCCCEEEEecCCcccHHHHHhhhh-----CCC-------EEEEECCCC----C----HHHHhhcCe----eeCCHHH
Confidence 356889999999999999999998753 364 577777641 0 011111111 1247999
Q ss_pred HhcccCCcEEEec----cCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCCceeC
Q 008629 374 AVKVIKPTILIGS----SGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYN 449 (559)
Q Consensus 374 ~V~~vkPtvLIG~----S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~EctpedA~~wt~G~aifAsGSPF~pv~~~ 449 (559)
+++. .|+++=. ...-+.|+++.++.|. +.-|+.=.|.-..--|---.+|+ ..|+.- | |- +|. .
T Consensus 227 ll~~--aDvV~l~~Plt~~T~~li~~~~l~~mk---~gailIN~aRG~~vde~aL~~aL--~~g~i~-a-aL---DV~-~ 293 (365)
T 4hy3_A 227 VLTK--SDFIFVVAAVTSENKRFLGAEAFSSMR---RGAAFILLSRADVVDFDALMAAV--SSGHIV-A-AS---DVY-P 293 (365)
T ss_dssp HHHS--CSEEEECSCSSCC---CCCHHHHHTSC---TTCEEEECSCGGGSCHHHHHHHH--HTTSSE-E-EE---SCC-S
T ss_pred HHhc--CCEEEEcCcCCHHHHhhcCHHHHhcCC---CCcEEEECcCCchhCHHHHHHHH--HcCCce-E-Ee---eCC-C
Confidence 9985 8998843 2334689999999996 67788877764322222222333 356643 3 31 111 0
Q ss_pred CeeeC----ccCccccccchhhHHHHHHhCCcccCHHHHHHHHHHHHhccC
Q 008629 450 GKVFV----PGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVT 496 (559)
Q Consensus 450 G~~~~----p~Q~NN~yiFPGlglG~l~~~a~~Itd~m~~aAA~aLA~~v~ 496 (559)
..... -=+..|+.+-|=+|-....+ .+.|...+++-|.....
T Consensus 294 ~EPl~~~~pL~~~~nvilTPHia~~t~e~-----~~~~~~~~~~ni~~~~~ 339 (365)
T 4hy3_A 294 EEPLPLDHPVRSLKGFIRSAHRAGALDSA-----FKKMGDMVLEDMDLMDR 339 (365)
T ss_dssp SSSCCTTCGGGTCTTEEECCSCSSCCHHH-----HHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCChhhcCCCEEECCccccCHHHH-----HHHHHHHHHHHHHHHHc
Confidence 01100 12456888888766432221 24555666666666554
No 144
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=84.27 E-value=11 Score=38.95 Aligned_cols=121 Identities=14% Similarity=0.204 Sum_probs=81.3
Q ss_pred CCCCeeecCCc---chhHHHHHHHHHHHHH----------h----------CCCcccceEEEeCcChHHHHHHHHHHHHH
Q 008629 266 TTHLVFNDDIQ---GTASVVLAGVVAALKL----------I----------GGTLAEHRFLFLGAGEAGTGIAELIALEI 322 (559)
Q Consensus 266 ~~~~~FnDDiQ---GTaaV~LAgll~Alr~----------~----------g~~l~d~riv~~GAGsAgiGia~ll~~~~ 322 (559)
..+++.|---- .+|=-+++-+|+..|- . |..|.+.+|.|+|.|..|-.+|+.+...
T Consensus 92 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~- 170 (343)
T 2yq5_A 92 YNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAM- 170 (343)
T ss_dssp --CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT-
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhC-
Confidence 35777775333 3444568888877651 2 3468899999999999999999988643
Q ss_pred HHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHH
Q 008629 323 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVI 398 (559)
Q Consensus 323 ~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv 398 (559)
|+ +++.+|+.. . .... ..+. ..+|.|+++. .|+++=.-- .-+.|+++.+
T Consensus 171 ----G~-------~V~~~d~~~----~--~~~~----~~~~----~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 223 (343)
T 2yq5_A 171 ----GA-------KVIAYDVAY----N--PEFE----PFLT----YTDFDTVLKE--ADIVSLHTPLFPSTENMIGEKQL 223 (343)
T ss_dssp ----TC-------EEEEECSSC----C--GGGT----TTCE----ECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHH
T ss_pred ----CC-------EEEEECCCh----h--hhhh----cccc----ccCHHHHHhc--CCEEEEcCCCCHHHHHHhhHHHH
Confidence 65 688888752 1 1011 1111 1379999986 899885432 2478999999
Q ss_pred HHHHcCCCCcEEEecCCCC
Q 008629 399 EAMASFNEKPLILALSNPT 417 (559)
Q Consensus 399 ~~Ma~~~erPIIFaLSNPt 417 (559)
+.|. +..++.=.|.-.
T Consensus 224 ~~mk---~gailIN~aRg~ 239 (343)
T 2yq5_A 224 KEMK---KSAYLINCARGE 239 (343)
T ss_dssp HHSC---TTCEEEECSCGG
T ss_pred hhCC---CCcEEEECCCCh
Confidence 9996 677888777633
No 145
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=83.62 E-value=0.65 Score=47.43 Aligned_cols=106 Identities=19% Similarity=0.273 Sum_probs=64.0
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCC--CCHHHHh
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAV 375 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~--~~L~e~V 375 (559)
+..||.|+|||..|.++|..|.. .|+ + .+.++|.+-=..++-..+|.+.. .+....... .+-.+++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~-----~~~----~--~v~l~Di~~~~~~g~a~dL~~~~-~~~~~~~~v~~t~d~~a~ 71 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALI-----KQL----G--DVVLFDIAQGMPNGKALDLLQTC-PIEGVDFKVRGTNDYKDL 71 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHTTH-HHHTCCCCEEEESCGGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHh-----CCC----c--eEEEEeCChHHHHHHHHHHHhhh-hhcCCCcEEEEcCCHHHH
Confidence 45799999999999999988765 365 2 69999985210000000122111 111111111 1224677
Q ss_pred cccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 376 KVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 376 ~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
+. .|++|=+.+.+ |. .-+++++.+.++++.-+|+-.|||.
T Consensus 72 ~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 125 (321)
T 3p7m_A 72 EN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPL 125 (321)
T ss_dssp TT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred CC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 75 89887555443 31 1256778888899888999999997
No 146
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=83.41 E-value=2.6 Score=39.67 Aligned_cols=80 Identities=16% Similarity=0.221 Sum_probs=49.3
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHH
Q 008629 295 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 374 (559)
Q Consensus 295 ~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 374 (559)
..+...||.|+|+|..|..+|..+... | .+++++|+. .. +
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~-----g-------~~V~~~~~~--------~~--------------------~ 54 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIA-----G-------HEVTYYGSK--------DQ--------------------A 54 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECTT--------CC--------------------C
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEcCC--------HH--------------------H
Confidence 346677999999999999999988653 5 368877753 11 2
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 008629 375 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 418 (559)
Q Consensus 375 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 418 (559)
++ ++|++|= +.. ....+++++.+....+..+|.-+||+..
T Consensus 55 ~~--~aD~vi~-av~-~~~~~~v~~~l~~~~~~~~vi~~~~g~~ 94 (209)
T 2raf_A 55 TT--LGEIVIM-AVP-YPALAALAKQYATQLKGKIVVDITNPLN 94 (209)
T ss_dssp SS--CCSEEEE-CSC-HHHHHHHHHHTHHHHTTSEEEECCCCBC
T ss_pred hc--cCCEEEE-cCC-cHHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 22 3666652 222 2345677777654333678888999653
No 147
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=83.40 E-value=0.99 Score=45.60 Aligned_cols=99 Identities=17% Similarity=0.392 Sum_probs=61.8
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcC----CCchhchhhcccc--CCCCCHHHH
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEH--EPVNNLLDA 374 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~----~l~~~k~~fA~~~--~~~~~L~e~ 374 (559)
||.|+|||..|.++|-.++.. |+ ..++|+|.+ .++-+ +|.+....+.... ....+. ++
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~----~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a 64 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIART----PGKPQGEALDLAHAAAELGVDIRISGSNSY-ED 64 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSS----TTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GG
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCC----hhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HH
Confidence 689999999999999776542 54 369999985 22211 1211110111110 001345 66
Q ss_pred hcccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 375 VKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 375 V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
++. .|++|=+.+.+.. .-+++++.|.++++.-+|+-.|||.
T Consensus 65 ~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (308)
T 2d4a_B 65 MRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPV 119 (308)
T ss_dssp GTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred hCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCch
Confidence 765 9999866555431 1357888888889888777789998
No 148
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=83.40 E-value=39 Score=35.83 Aligned_cols=193 Identities=13% Similarity=0.179 Sum_probs=117.7
Q ss_pred cCCCCeeecCC---cchhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHH
Q 008629 265 GTTHLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 323 (559)
Q Consensus 265 r~~~~~FnDDi---QGTaaV~LAgll~Alr~------------------~g~~l~d~riv~~GAGsAgiGia~ll~~~~~ 323 (559)
+..+++||--- ..+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 101 ~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~~-- 178 (416)
T 3k5p_A 101 KRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAESL-- 178 (416)
T ss_dssp HTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred hcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHHC--
Confidence 45788888643 23455678888888753 24678999999999999999999988653
Q ss_pred HhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHH
Q 008629 324 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 399 (559)
Q Consensus 324 ~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv~ 399 (559)
|+ +++.+|+.. + .... -+ ....+|.|+++. .|+++=.-- .-+.|+++.++
T Consensus 179 ---G~-------~V~~yd~~~-----~---~~~~---~~---~~~~sl~ell~~--aDvV~lhvPlt~~T~~li~~~~l~ 232 (416)
T 3k5p_A 179 ---GM-------TVRYYDTSD-----K---LQYG---NV---KPAASLDELLKT--SDVVSLHVPSSKSTSKLITEAKLR 232 (416)
T ss_dssp ---TC-------EEEEECTTC-----C---CCBT---TB---EECSSHHHHHHH--CSEEEECCCC-----CCBCHHHHH
T ss_pred ---CC-------EEEEECCcc-----h---hccc---Cc---EecCCHHHHHhh--CCEEEEeCCCCHHHhhhcCHHHHh
Confidence 65 688888741 1 1100 01 123579999986 898874321 23689999999
Q ss_pred HHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCC-CC--CceeCCeeeCc-cCccccccchhhHHHHHHhC
Q 008629 400 AMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSP-FD--PFEYNGKVFVP-GQANNAYIFPGFGLGLVISG 475 (559)
Q Consensus 400 ~Ma~~~erPIIFaLSNPt~~~EctpedA~~wt~G~aifAsGSP-F~--pv~~~G~~~~p-~Q~NN~yiFPGlglG~l~~~ 475 (559)
.|. +..++.=.|.-..--|---.+|+ ..|+. .+.|.. |+ |..-+.....| =+..|+.+-|=+|-...-++
T Consensus 233 ~mk---~gailIN~aRG~vvd~~aL~~aL--~~g~i-~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea~ 306 (416)
T 3k5p_A 233 KMK---KGAFLINNARGSDVDLEALAKVL--QEGHL-AGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEAQ 306 (416)
T ss_dssp HSC---TTEEEEECSCTTSBCHHHHHHHH--HTTSE-EEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHHH
T ss_pred hCC---CCcEEEECCCChhhhHHHHHHHH--HcCCc-cEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHHH
Confidence 996 67788888875422232233444 35664 323322 21 11101000011 35678999998764333322
Q ss_pred CcccCHHHHHHHHHHHHhccC
Q 008629 476 AIRVHDDMLLAASEALAKQVT 496 (559)
Q Consensus 476 a~~Itd~m~~aAA~aLA~~v~ 496 (559)
+.|...+++.|.+.+.
T Consensus 307 -----~~~~~~~~~nl~~~l~ 322 (416)
T 3k5p_A 307 -----ERIGTEVTRKLVEYSD 322 (416)
T ss_dssp -----HHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHh
Confidence 4566667777776663
No 149
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=83.34 E-value=0.69 Score=47.19 Aligned_cols=104 Identities=20% Similarity=0.290 Sum_probs=63.1
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCC--CCHHHHhccc
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVI 378 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~--~~L~e~V~~v 378 (559)
||.|+|||..|.++|..|+.. |+ .+.+.++|.+-=..++-.-+|.+. ..+....... .+..++++.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~~v~~~~~~~a~~~- 69 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DV-----AKEVVMVDIKDGMPQGKALDMRES-SPIHGFDTRVTGTNDYGPTED- 69 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----SSEEEEECSSTTHHHHHHHHHHHH-HHHHTCCCEEEEESSSGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCchHHHHHHHHHHhcc-ccccCCCcEEEECCCHHHhCC-
Confidence 799999999999999988763 55 257999998521111000012211 1121100011 134567775
Q ss_pred CCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 379 KPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 379 kPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
.|++|=+.+.+ |- .-+++++.+.++++..+|+-.|||.
T Consensus 70 -aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 121 (314)
T 3nep_X 70 -SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPL 121 (314)
T ss_dssp -CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSH
T ss_pred -CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCch
Confidence 88877444433 31 1256777888999999999999998
No 150
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=83.15 E-value=12 Score=38.12 Aligned_cols=123 Identities=16% Similarity=0.127 Sum_probs=81.4
Q ss_pred cCCCCeeecCCcc---hhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHH
Q 008629 265 GTTHLVFNDDIQG---TASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 323 (559)
Q Consensus 265 r~~~~~FnDDiQG---TaaV~LAgll~Alr~------------------~g~~l~d~riv~~GAGsAgiGia~ll~~~~~ 323 (559)
+..+.+.|----. +|=-+++.+|+..|- .|..|.+.+|.|+|.|..|..+|+.+..
T Consensus 91 ~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~--- 167 (333)
T 1j4a_A 91 ELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEG--- 167 (333)
T ss_dssp HTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHH---
T ss_pred hCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHH---
Confidence 3466777653333 334478888887762 2356889999999999999999998864
Q ss_pred HhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHH
Q 008629 324 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 399 (559)
Q Consensus 324 ~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv~ 399 (559)
.|+ +++.+|+.. . . . .+ .++. ...+|.|+++. .|+++=.-. ..++|+++.++
T Consensus 168 --~G~-------~V~~~d~~~----~--~-~--~~-~~~~---~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~ 223 (333)
T 1j4a_A 168 --FGA-------KVITYDIFR----N--P-E--LE-KKGY---YVDSLDDLYKQ--ADVISLHVPDVPANVHMINDESIA 223 (333)
T ss_dssp --TTC-------EEEEECSSC----C--H-H--HH-HTTC---BCSCHHHHHHH--CSEEEECSCCCGGGTTCBSHHHHH
T ss_pred --CCC-------EEEEECCCc----c--h-h--HH-hhCe---ecCCHHHHHhh--CCEEEEcCCCcHHHHHHHhHHHHh
Confidence 264 588888742 1 1 1 11 1221 12378898875 888885432 23678899999
Q ss_pred HHHcCCCCcEEEecCCCC
Q 008629 400 AMASFNEKPLILALSNPT 417 (559)
Q Consensus 400 ~Ma~~~erPIIFaLSNPt 417 (559)
.|. +..++.-.|.-.
T Consensus 224 ~mk---~ga~lIn~arg~ 238 (333)
T 1j4a_A 224 KMK---QDVVIVNVSRGP 238 (333)
T ss_dssp HSC---TTEEEEECSCGG
T ss_pred hCC---CCcEEEECCCCc
Confidence 886 567888777743
No 151
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=83.07 E-value=1.9 Score=41.40 Aligned_cols=95 Identities=14% Similarity=0.097 Sum_probs=56.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhc---hhhccccCCCCCHHHHhcc
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK---KPWAHEHEPVNNLLDAVKV 377 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k---~~fA~~~~~~~~L~e~V~~ 377 (559)
||.|+|+|..|..+|..|... | .+++++|+.- ++.+.+.... ..+-.. ....+ .++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~~~~-~~~~~-~~~~~~ 63 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----G-------HEVQGWLRVP----QPYCSVNLVETDGSIFNES-LTAND-PDFLAT 63 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSC----CSEEEEEEECTTSCEEEEE-EEESC-HHHHHT
T ss_pred eEEEECcCHHHHHHHHHHHhC-----C-------CCEEEEEcCc----cceeeEEEEcCCCceeeee-eeecC-ccccCC
Confidence 799999999999999988753 5 3688888752 1111121100 000000 00122 466664
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 008629 378 IKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 417 (559)
Q Consensus 378 vkPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 417 (559)
.|++|= +..+. ..+++++.+..+. +..+|..++|..
T Consensus 64 --~d~vi~-~v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 64 --SDLLLV-TLKAW-QVSDAVKSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp --CSEEEE-CSCGG-GHHHHHHHHHTTSCTTSCEEEECSSS
T ss_pred --CCEEEE-EecHH-hHHHHHHHHHhhCCCCCEEEEecCCC
Confidence 888773 33332 3689999887653 456777788865
No 152
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=83.03 E-value=1.1 Score=44.19 Aligned_cols=32 Identities=31% Similarity=0.530 Sum_probs=26.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.||.|+|+|..|.+||..+..+ |. +++++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999998753 63 68888874
No 153
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=83.02 E-value=3.2 Score=37.11 Aligned_cols=96 Identities=11% Similarity=0.096 Sum_probs=53.3
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc-ccCCCCCHHHHhc
Q 008629 299 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVK 376 (559)
Q Consensus 299 d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~ 376 (559)
..+|+|.|| |-.|-.+++.|++ .| .++++++++.- +.+.+......+.. +..+..++.++++
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~-----~g-------~~V~~~~r~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 66 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQ-----AG-------YEVTVLVRDSS----RLPSEGPRPAHVVVGDVLQAADVDKTVA 66 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESCGG----GSCSSSCCCSEEEESCTTSHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHH-----CC-------CeEEEEEeChh----hcccccCCceEEEEecCCCHHHHHHHHc
Confidence 368999998 8777777777764 25 36888877521 10111011111111 2222235778887
Q ss_pred ccCCcEEEeccCCCCC---------CCHHHHHHHHcCCCCcEEEe
Q 008629 377 VIKPTILIGSSGVGRT---------FTKEVIEAMASFNEKPLILA 412 (559)
Q Consensus 377 ~vkPtvLIG~S~~~g~---------Ft~evv~~Ma~~~erPIIFa 412 (559)
. +|++|=+.+.... .+..++++|.+..-+.|||.
T Consensus 67 ~--~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~ 109 (206)
T 1hdo_A 67 G--QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVAC 109 (206)
T ss_dssp T--CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred C--CCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEE
Confidence 5 8999988775431 14556666655444455553
No 154
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=83.01 E-value=1.5 Score=47.13 Aligned_cols=32 Identities=22% Similarity=0.345 Sum_probs=26.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.||.|+|+|..|.|||..++.+ |. +++++|.+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a-----G~-------~V~l~D~~ 86 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA-----GI-------ETFLVVRN 86 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECc
Confidence 6899999999999999988763 64 57777763
No 155
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=83.00 E-value=2.5 Score=43.00 Aligned_cols=210 Identities=13% Similarity=0.074 Sum_probs=117.6
Q ss_pred eeeccCCCCcHHH-HHH---HHcCCCCeeecCC----cchhHHHHHHHHHHHHH----------------hCCCcccceE
Q 008629 247 IQFEDFANHNAFE-LLA---KYGTTHLVFNDDI----QGTASVVLAGVVAALKL----------------IGGTLAEHRF 302 (559)
Q Consensus 247 Iq~EDf~~~~Af~-lL~---ryr~~~~~FnDDi----QGTaaV~LAgll~Alr~----------------~g~~l~d~ri 302 (559)
|+.-=.+-.|-.+ +-. -....+++.|--- +..|=-+++.+|+..|- .+..|.+.+|
T Consensus 63 I~~~~aG~d~i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tv 142 (315)
T 3pp8_A 63 VFVLGAGVDAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSV 142 (315)
T ss_dssp EEESSSCCHHHHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCE
T ss_pred EEECCEecccccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCEE
Confidence 5555455444323 222 1234677666322 34555678888887763 2567899999
Q ss_pred EEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcE
Q 008629 303 LFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTI 382 (559)
Q Consensus 303 v~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtv 382 (559)
.|+|.|..|..+|+.+.. .|+ +++.+|+..- ...... .+. ...+|.|+++. .|+
T Consensus 143 GIiG~G~IG~~vA~~l~~-----~G~-------~V~~~dr~~~-------~~~~~~-~~~----~~~~l~ell~~--aDi 196 (315)
T 3pp8_A 143 GIMGAGVLGAKVAESLQA-----WGF-------PLRCWSRSRK-------SWPGVE-SYV----GREELRAFLNQ--TRV 196 (315)
T ss_dssp EEECCSHHHHHHHHHHHT-----TTC-------CEEEEESSCC-------CCTTCE-EEE----SHHHHHHHHHT--CSE
T ss_pred EEEeeCHHHHHHHHHHHH-----CCC-------EEEEEcCCch-------hhhhhh-hhc----ccCCHHHHHhh--CCE
Confidence 999999999999998864 365 5777876421 111111 110 11468888885 888
Q ss_pred EEecc----CCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCCcee-CCeeeCccC
Q 008629 383 LIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQ 457 (559)
Q Consensus 383 LIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~EctpedA~~wt~G~aifAsGSPF~pv~~-~G~~~~p~Q 457 (559)
++=.- ..-+.|+++.++.|. +..|+.=.|.-..--|---.+|+ ..|+.-.|.=--|++--. .+. .-=+
T Consensus 197 V~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aRG~~vd~~aL~~aL--~~g~i~gA~lDV~~~EPl~~~~--pL~~ 269 (315)
T 3pp8_A 197 LINLLPNTAQTVGIINSELLDQLP---DGAYVLNLARGVHVQEADLLAAL--DSGKLKGAMLDVFSQEPLPQES--PLWR 269 (315)
T ss_dssp EEECCCCCGGGTTCBSHHHHTTSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEEEESCCSSSSCCTTC--GGGG
T ss_pred EEEecCCchhhhhhccHHHHhhCC---CCCEEEECCCChhhhHHHHHHHH--HhCCccEEEcCCCCCCCCCCCC--hhhc
Confidence 87441 124688999888886 67788877764322222223343 346543332111111000 000 0124
Q ss_pred ccccccchhhHHHHHHhCCcccCHHHHHHHHHHHHhccC
Q 008629 458 ANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVT 496 (559)
Q Consensus 458 ~NN~yiFPGlglG~l~~~a~~Itd~m~~aAA~aLA~~v~ 496 (559)
..|+.+-|=++- .+. .+.|...+++-|.....
T Consensus 270 ~~nvilTPHia~------~t~-~~~~~~~~~~ni~~~~~ 301 (315)
T 3pp8_A 270 HPRVAMTPHIAA------VTR-PAEAIDYISRTITQLEK 301 (315)
T ss_dssp CTTEEECSSCSS------CCC-HHHHHHHHHHHHHHHHH
T ss_pred CCCEEECCCCCc------ccH-HHHHHHHHHHHHHHHHc
Confidence 567888887652 222 25676667777766654
No 156
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=82.99 E-value=0.86 Score=46.45 Aligned_cols=107 Identities=17% Similarity=0.267 Sum_probs=66.0
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC--ccccCCcCCCchhchhhccccCCC--CCHH
Q 008629 297 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG--LIVSSRKDSLQHFKKPWAHEHEPV--NNLL 372 (559)
Q Consensus 297 l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G--Li~~~R~~~l~~~k~~fA~~~~~~--~~L~ 372 (559)
.+..||.|+|||..|.++|-.+.. .|+ ..+.++|.+- =..++...+|.+. .++......+ .+-.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~-----~g~------~~v~l~D~~~~~~~~~g~a~dl~~~-~~~~~~~~~i~~t~d~ 73 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQ-----KEL------ADVVLVDIPQLENPTKGKALDMLEA-SPVQGFDANIIGTSDY 73 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECCGGGHHHHHHHHHHHHHH-HHHHTCCCCEEEESCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEeccchHHHHHHhhhhHHHh-hhhccCCCEEEEcCCH
Confidence 345799999999999999988875 254 2789999861 1111110112221 2332211111 1124
Q ss_pred HHhcccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 373 DAVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 373 e~V~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
++++. .|++|=+.+.+ |- .-+++++.+.++++.-+|+-.|||.
T Consensus 74 ~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPv 130 (315)
T 3tl2_A 74 ADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPV 130 (315)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChH
Confidence 56664 88887554433 31 2257788888999999999999998
No 157
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=82.87 E-value=8.9 Score=39.24 Aligned_cols=97 Identities=15% Similarity=0.068 Sum_probs=63.4
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHH
Q 008629 294 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 373 (559)
Q Consensus 294 g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e 373 (559)
|..|.+.+|.|+|.|..|..+|+.+... .|+ +++.+|+..- .....+..-+. ...+|.|
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~----~G~-------~V~~~d~~~~-------~~~~~~~~g~~---~~~~l~e 216 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHG----LGM-------KLVYYDVAPA-------DAETEKALGAE---RVDSLEE 216 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEECSSCC-------CHHHHHHHTCE---ECSSHHH
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHh----cCC-------EEEEECCCCc-------chhhHhhcCcE---EeCCHHH
Confidence 5678999999999999999999988622 364 5888887421 11111100011 1137888
Q ss_pred HhcccCCcEEEeccC----CCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 008629 374 AVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSNP 416 (559)
Q Consensus 374 ~V~~vkPtvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSNP 416 (559)
+++. .|+++=.-- ..+.++++.++.|. +..+|.-.|.-
T Consensus 217 ll~~--aDvVil~vp~~~~t~~li~~~~l~~mk---~gailin~srg 258 (348)
T 2w2k_A 217 LARR--SDCVSVSVPYMKLTHHLIDEAFFAAMK---PGSRIVNTARG 258 (348)
T ss_dssp HHHH--CSEEEECCCCSGGGTTCBCHHHHHHSC---TTEEEEECSCG
T ss_pred Hhcc--CCEEEEeCCCChHHHHHhhHHHHhcCC---CCCEEEECCCC
Confidence 8875 898875422 23688888888885 56677766653
No 158
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=82.79 E-value=2.8 Score=42.97 Aligned_cols=187 Identities=15% Similarity=0.096 Sum_probs=107.7
Q ss_pred CCCeeecCCc---chhHHHHHHHHHHHHH----------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcC
Q 008629 267 THLVFNDDIQ---GTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTK 327 (559)
Q Consensus 267 ~~~~FnDDiQ---GTaaV~LAgll~Alr~----------------~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G 327 (559)
.+++.|---- .+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+... |
T Consensus 89 gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G 163 (324)
T 3hg7_A 89 DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHF-----G 163 (324)
T ss_dssp SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHT-----T
T ss_pred CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhC-----C
Confidence 4555554211 2344567777776652 35679999999999999999999998653 6
Q ss_pred CChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHHHHc
Q 008629 328 APVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAMAS 403 (559)
Q Consensus 328 ~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~ 403 (559)
+ +++.+|+.. .. ....... ....+|.|+++. .|+++=.- ..-+.|+++.++.|.
T Consensus 164 ~-------~V~~~dr~~----~~---~~~~~~~-----~~~~~l~ell~~--aDvV~l~lPlt~~T~~li~~~~l~~mk- 221 (324)
T 3hg7_A 164 M-------KVLGVSRSG----RE---RAGFDQV-----YQLPALNKMLAQ--ADVIVSVLPATRETHHLFTASRFEHCK- 221 (324)
T ss_dssp C-------EEEEECSSC----CC---CTTCSEE-----ECGGGHHHHHHT--CSEEEECCCCCSSSTTSBCTTTTTCSC-
T ss_pred C-------EEEEEcCCh----HH---hhhhhcc-----cccCCHHHHHhh--CCEEEEeCCCCHHHHHHhHHHHHhcCC-
Confidence 5 588888753 11 1111111 123578888875 88887542 224678888887775
Q ss_pred CCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEe-----eCCCCCCceeCCeeeCccCccccccchhhHHHHHHhCCcc
Q 008629 404 FNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIR 478 (559)
Q Consensus 404 ~~erPIIFaLSNPt~~~EctpedA~~wt~G~aifA-----sGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~~~a~~ 478 (559)
+..++.=.|.-..--|---.+|+ .+|+.-.| ..-|.++- . .-=+..|+.+-|=++- .+.
T Consensus 222 --~gailIN~aRG~~vde~aL~~aL--~~g~i~ga~lDV~~~EPl~~~----~--pL~~~~nvilTPHia~------~t~ 285 (324)
T 3hg7_A 222 --PGAILFNVGRGNAINEGDLLTAL--RTGKLGMAVLDVFEQEPLPAD----S--PLWGQPNLIITPHNSA------YSF 285 (324)
T ss_dssp --TTCEEEECSCGGGBCHHHHHHHH--HTTSSSEEEESCCSSSSCCTT----C--TTTTCTTEEECCSCSS------CCC
T ss_pred --CCcEEEECCCchhhCHHHHHHHH--HcCCceEEEeccCCCCCCCCC----C--hhhcCCCEEEeCCCcc------ccH
Confidence 66788877763322222222333 24443111 11122110 0 0113568888887652 222
Q ss_pred cCHHHHHHHHHHHHhccCc
Q 008629 479 VHDDMLLAASEALAKQVTE 497 (559)
Q Consensus 479 Itd~m~~aAA~aLA~~v~~ 497 (559)
...|...+++-|.....-
T Consensus 286 -~~~~~~~~~~nl~~~~~G 303 (324)
T 3hg7_A 286 -PDDVAQIFVRNYIRFIDG 303 (324)
T ss_dssp -HHHHHHHHHHHHHHHHTT
T ss_pred -HHHHHHHHHHHHHHHHcC
Confidence 256777777777776643
No 159
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=82.73 E-value=5.5 Score=40.69 Aligned_cols=189 Identities=15% Similarity=0.242 Sum_probs=109.2
Q ss_pred CCCCeeecCC---cchhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHH
Q 008629 266 TTHLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 324 (559)
Q Consensus 266 ~~~~~FnDDi---QGTaaV~LAgll~Alr~------------------~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~ 324 (559)
..+++.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+...
T Consensus 83 ~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~--- 159 (324)
T 3evt_A 83 AGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASAL--- 159 (324)
T ss_dssp TTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHhC---
Confidence 4566666542 23344466777776542 26679999999999999999999988643
Q ss_pred hcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHH
Q 008629 325 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 400 (559)
Q Consensus 325 ~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~ 400 (559)
|+ +++.+|+..- . .......+ ...+|.|+++. .|+++=.- ..-+.|+++.+..
T Consensus 160 --G~-------~V~~~dr~~~----~---~~~~~~~~-----~~~~l~ell~~--aDvV~l~lPlt~~t~~li~~~~l~~ 216 (324)
T 3evt_A 160 --GM-------HVIGVNTTGH----P---ADHFHETV-----AFTATADALAT--ANFIVNALPLTPTTHHLFSTELFQQ 216 (324)
T ss_dssp --TC-------EEEEEESSCC----C---CTTCSEEE-----EGGGCHHHHHH--CSEEEECCCCCGGGTTCBSHHHHHT
T ss_pred --CC-------EEEEECCCcc----h---hHhHhhcc-----ccCCHHHHHhh--CCEEEEcCCCchHHHHhcCHHHHhc
Confidence 65 5788887521 1 11111111 12468888886 88888432 2246899999988
Q ss_pred HHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEee-----CCCCCCceeCCeeeCccCccccccchhhHHHHHHhC
Q 008629 401 MASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFAS-----GSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISG 475 (559)
Q Consensus 401 Ma~~~erPIIFaLSNPt~~~EctpedA~~wt~G~aifAs-----GSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~~~ 475 (559)
|. +..++.=.|.-..--|-.-.+|++ +|+.-.|. .-|.++ +. .-=+..|+.+-|=++-.
T Consensus 217 mk---~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~~----~~--pL~~~~nvilTPHia~~----- 280 (324)
T 3evt_A 217 TK---QQPMLINIGRGPAVDTTALMTALD--HHQLSMAALDVTEPEPLPT----DH--PLWQRDDVLITPHISGQ----- 280 (324)
T ss_dssp CC---SCCEEEECSCGGGBCHHHHHHHHH--TTSCSEEEESSCSSSSCCT----TC--GGGGCSSEEECCSCTTC-----
T ss_pred CC---CCCEEEEcCCChhhhHHHHHHHHH--hCCceEEEeCCCCCCCCCC----CC--hhhcCCCEEEcCccccC-----
Confidence 86 667888777633222322233333 45432221 112111 00 01235688888876521
Q ss_pred CcccCHHHHHHHHHHHHhccC
Q 008629 476 AIRVHDDMLLAASEALAKQVT 496 (559)
Q Consensus 476 a~~Itd~m~~aAA~aLA~~v~ 496 (559)
...-.+.|...+++-|...+.
T Consensus 281 t~~~~~~~~~~~~~nl~~~l~ 301 (324)
T 3evt_A 281 IAHFRATVFPIFAANFAQFVK 301 (324)
T ss_dssp CCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHh
Confidence 122235666666776666653
No 160
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=82.66 E-value=7 Score=39.99 Aligned_cols=128 Identities=15% Similarity=0.123 Sum_probs=82.1
Q ss_pred hhHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEE
Q 008629 278 TASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC 338 (559)
Q Consensus 278 TaaV~LAgll~Alr~-------------------~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~ 338 (559)
+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|-.+|+.+... |+ +++
T Consensus 101 vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~-----G~-------~V~ 168 (334)
T 2pi1_A 101 VAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVL 168 (334)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEE
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHHHHC-----cC-------EEE
Confidence 444567777776642 35679999999999999999999998753 64 688
Q ss_pred EEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEecC
Q 008629 339 LVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 339 lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLS 414 (559)
.+|+..- . . .. ...-...+|.|+++. .|+++=.- ...+.|+++.++.|. +..|+.=.|
T Consensus 169 ~~d~~~~------~-~--~~----~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~a 230 (334)
T 2pi1_A 169 CYDVVKR------E-D--LK----EKGCVYTSLDELLKE--SDVISLHVPYTKETHHMINEERISLMK---DGVYLINTA 230 (334)
T ss_dssp EECSSCC------H-H--HH----HTTCEECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTEEEEECS
T ss_pred EECCCcc------h-h--hH----hcCceecCHHHHHhh--CCEEEEeCCCChHHHHhhCHHHHhhCC---CCcEEEECC
Confidence 8887421 0 1 00 001112359999986 89887542 234689999999996 677888777
Q ss_pred CCCCCCCCCHHHHhcccCCcEEE
Q 008629 415 NPTSQSECTAEEAYTWSKGRAIF 437 (559)
Q Consensus 415 NPt~~~EctpedA~~wt~G~aif 437 (559)
.-..--|-.-.+|+ ..|+.-.
T Consensus 231 Rg~~vd~~aL~~aL--~~g~i~g 251 (334)
T 2pi1_A 231 RGKVVDTDALYRAY--QRGKFSG 251 (334)
T ss_dssp CGGGBCHHHHHHHH--HTTCEEE
T ss_pred CCcccCHHHHHHHH--HhCCceE
Confidence 64422232333343 3565443
No 161
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=82.39 E-value=1.4 Score=46.44 Aligned_cols=119 Identities=24% Similarity=0.280 Sum_probs=67.1
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHh
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 375 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V 375 (559)
.++.+||+|+|.|.+|+++|++|.+ .| .++...|.+-.-.....+.|...-.++-... .-.+.+
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~-----~G-------~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~----~~~~~~ 69 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAK-----LG-------AIVTVNDGKPFDENPTAQSLLEEGIKVVCGS----HPLELL 69 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHH-----TT-------CEEEEEESSCGGGCHHHHHHHHTTCEEEESC----CCGGGG
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHh-----CC-------CEEEEEeCCcccCChHHHHHHhCCCEEEECC----ChHHhh
Confidence 4678999999999999999888875 37 3688888852110000001211111111110 011122
Q ss_pred cccC-CcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCCceeCCeee
Q 008629 376 KVIK-PTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVF 453 (559)
Q Consensus 376 ~~vk-PtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~EctpedA~~wt~G~aifAsGSPF~pv~~~G~~~ 453 (559)
+ + +|.+|=.++.+ .=++++.++... .-||| +. +|-++...+++.|-.||| ||||-
T Consensus 70 ~--~~~d~vv~spgi~-~~~p~~~~a~~~--gi~v~-------~~----~e~~~~~~~~~~IaVTGT-------nGKTT 125 (451)
T 3lk7_A 70 D--EDFCYMIKNPGIP-YNNPMVKKALEK--QIPVL-------TE----VELAYLVSESQLIGITGS-------NGKTT 125 (451)
T ss_dssp G--SCEEEEEECTTSC-TTSHHHHHHHHT--TCCEE-------CH----HHHHHHHCCSEEEEEECS-------SCHHH
T ss_pred c--CCCCEEEECCcCC-CCChhHHHHHHC--CCcEE-------eH----HHHHHHhcCCCEEEEECC-------CCHHH
Confidence 2 3 68777555655 347777766542 45655 22 233444566788889997 77754
No 162
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=82.02 E-value=0.78 Score=47.04 Aligned_cols=102 Identities=17% Similarity=0.250 Sum_probs=64.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcC----CCchhchhhcc-ccCCCCCHHH
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAH-EHEPVNNLLD 373 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~----~l~~~k~~fA~-~~~~~~~L~e 373 (559)
-.||.|+|||..|..+|..|+.. |+ ...+.++|.+ .++-+ +|.+. .+|.. ...-..+..+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~-----~~-----~~~l~l~D~~----~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~ 69 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ-----GI-----TDELVVIDVN----KEKAMGDVMDLNHG-KAFAPQPVKTSYGTYE 69 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSC----HHHHHHHHHHHHHT-GGGSSSCCEEEEECGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEecc----hHHHHHHHHHHHhc-cccccCCeEEEeCcHH
Confidence 46899999999999999888753 55 2579999974 11100 13322 23321 1000112235
Q ss_pred HhcccCCcEEEeccCCC---CC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 008629 374 AVKVIKPTILIGSSGVG---RT-----F------TKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 374 ~V~~vkPtvLIG~S~~~---g~-----F------t~evv~~Ma~~~erPIIFaLSNPt 417 (559)
+++. .|++|=+.+.+ |- | -+++++.+.++++.-+|+-.|||.
T Consensus 70 a~~~--aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPv 125 (326)
T 3pqe_A 70 DCKD--ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPV 125 (326)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred HhCC--CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChH
Confidence 6664 88877444433 31 1 257778888999999999999998
No 163
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=81.93 E-value=3.2 Score=41.48 Aligned_cols=111 Identities=13% Similarity=0.173 Sum_probs=63.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccC-CcCCCchhch--hhccc------cCCCC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS-RKDSLQHFKK--PWAHE------HEPVN 369 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~-R~~~l~~~k~--~fA~~------~~~~~ 369 (559)
..||.|+|+|..|..+|..|... |........+++++|+..-.... +.+.+..... .|-.. .....
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~-----g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN-----AAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVP 82 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----HHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-----CCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEc
Confidence 36899999999999999998764 31000001468888875321000 0000110000 01000 00014
Q ss_pred CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 008629 370 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 418 (559)
Q Consensus 370 ~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 418 (559)
++.++++. +|++| ++..+ ...+++++.+..+. +..+|..++|-.+
T Consensus 83 ~~~~~~~~--aD~Vi-lav~~-~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 83 DVVQAAED--ADILI-FVVPH-QFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp SHHHHHTT--CSEEE-ECCCG-GGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred CHHHHHcC--CCEEE-EeCCH-HHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 68888874 88777 33333 46789999887654 4668888999654
No 164
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=81.89 E-value=12 Score=38.09 Aligned_cols=121 Identities=17% Similarity=0.142 Sum_probs=80.7
Q ss_pred CCCCeeecCCcch---hHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHH
Q 008629 266 TTHLVFNDDIQGT---ASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 323 (559)
Q Consensus 266 ~~~~~FnDDiQGT---aaV~LAgll~Alr~-------------------~g~~l~d~riv~~GAGsAgiGia~ll~~~~~ 323 (559)
..+.+.|---..+ |=-+++.+|+..|- .|..|.+.++.|+|.|..|..+|+.+...
T Consensus 90 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 167 (333)
T 1dxy_A 90 YGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGF-- 167 (333)
T ss_dssp TTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHHC--
Confidence 4566666433333 34467777777651 34678999999999999999999988642
Q ss_pred HhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHH
Q 008629 324 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 399 (559)
Q Consensus 324 ~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv~ 399 (559)
|+ +++.+|+.. .. . .. .++. ..+|.|+++. .|+++=.-- ..++|+++.++
T Consensus 168 ---G~-------~V~~~d~~~----~~-~-~~----~~~~----~~~l~ell~~--aDvV~~~~P~~~~t~~li~~~~l~ 221 (333)
T 1dxy_A 168 ---GA-------KVIAYDPYP----MK-G-DH----PDFD----YVSLEDLFKQ--SDVIDLHVPGIEQNTHIINEAAFN 221 (333)
T ss_dssp ---TC-------EEEEECSSC----CS-S-CC----TTCE----ECCHHHHHHH--CSEEEECCCCCGGGTTSBCHHHHH
T ss_pred ---CC-------EEEEECCCc----ch-h-hH----hccc----cCCHHHHHhc--CCEEEEcCCCchhHHHHhCHHHHh
Confidence 64 588888752 11 1 11 1121 1378898885 898885422 23688999999
Q ss_pred HHHcCCCCcEEEecCCCC
Q 008629 400 AMASFNEKPLILALSNPT 417 (559)
Q Consensus 400 ~Ma~~~erPIIFaLSNPt 417 (559)
.|. +..++.=.|.-.
T Consensus 222 ~mk---~ga~lIn~srg~ 236 (333)
T 1dxy_A 222 LMK---PGAIVINTARPN 236 (333)
T ss_dssp HSC---TTEEEEECSCTT
T ss_pred hCC---CCcEEEECCCCc
Confidence 986 567887777633
No 165
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=81.59 E-value=1.8 Score=43.52 Aligned_cols=102 Identities=20% Similarity=0.280 Sum_probs=64.0
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc--cC-ccccCCcCCCchhchhhcc-cc--CC-CCCHH
Q 008629 301 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KG-LIVSSRKDSLQHFKKPWAH-EH--EP-VNNLL 372 (559)
Q Consensus 301 riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~--~G-Li~~~R~~~l~~~k~~fA~-~~--~~-~~~L~ 372 (559)
||+|.|| |..|..++..|+. .|+ ...+.|+|. +- .+..... +|.+.. ++.. +. .. ..+|.
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~-dl~~~~-~~~~~~~~i~~~~d~l~ 69 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPF-----MKDLVLIGREHSINKLEGLRE-DIYDAL-AGTRSDANIYVESDENL 69 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTT-----CCEEEEEECGGGHHHHHHHHH-HHHHHH-TTSCCCCEEEEEETTCG
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCC-----CCEEEEEcCCCchhhhHHHHH-HHHHhH-HhcCCCeEEEeCCcchH
Confidence 8999999 9999998887753 254 246899997 31 0000000 122211 2221 10 00 01377
Q ss_pred HHhcccCCcEEEeccCCCC---C-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 373 DAVKVIKPTILIGSSGVGR---T-----------FTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 373 e~V~~vkPtvLIG~S~~~g---~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
++++. .|++|=+.+.+. . .+++++++|.+++ +.+|+--|||.
T Consensus 70 ~al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv 125 (313)
T 1hye_A 70 RIIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV 125 (313)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH
T ss_pred HHhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH
Confidence 88886 898887766542 1 3568888999999 99999999998
No 166
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=81.56 E-value=1.1 Score=46.16 Aligned_cols=37 Identities=27% Similarity=0.439 Sum_probs=33.1
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+|++.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 33 ~L~~~~VlivG~GGlG~~ia~~La~~-----Gv------g~itlvD~d 69 (346)
T 1y8q_A 33 RLRASRVLLVGLKGLGAEIAKNLILA-----GV------KGLTMLDHE 69 (346)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEECC
Confidence 57788999999999999999999875 76 789999976
No 167
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=81.41 E-value=1.6 Score=46.05 Aligned_cols=22 Identities=32% Similarity=0.560 Sum_probs=20.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHH
Q 008629 300 HRFLFLGAGEAGTGIAELIALE 321 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~ 321 (559)
.||.|+|||+=|+.+|..|.+.
T Consensus 35 ~KI~ViGaGsWGTALA~~la~n 56 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAEN 56 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHc
Confidence 4999999999999999999875
No 168
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=81.09 E-value=1 Score=45.21 Aligned_cols=110 Identities=18% Similarity=0.149 Sum_probs=65.5
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCc---cccCCcCCCchhchhhccccCCCCCHHHHh
Q 008629 300 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL---IVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 375 (559)
Q Consensus 300 ~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL---i~~~R~~~l~~~k~~fA~~~~~~~~L~e~V 375 (559)
.||+|.|| |..|..++..|+. .|.--..-...++++|...- ...... +|.+...+|..+.....++.+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~~-dl~~~~~~~~~di~~~~~~~~a~ 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVVM-ELEDCAFPLLAGLEATDDPKVAF 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHH-HHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchhh-hhhcccccccCCeEeccChHHHh
Confidence 48999997 9999998887754 24310000136999997420 000000 12111112322222224688888
Q ss_pred cccCCcEEEeccCCCCC--------------CCHHHHHHHHcCC-CCcEEEecCCCC
Q 008629 376 KVIKPTILIGSSGVGRT--------------FTKEVIEAMASFN-EKPLILALSNPT 417 (559)
Q Consensus 376 ~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~-erPIIFaLSNPt 417 (559)
+. +|++|=+.+.+.. .|.++++++.+++ .+.+++-.|||.
T Consensus 79 ~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 79 KD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 75 9999977765532 3556788888876 666788899996
No 169
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=81.07 E-value=3 Score=41.81 Aligned_cols=100 Identities=10% Similarity=0.155 Sum_probs=59.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 378 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 378 (559)
..||.|+|+|..|..+|..|... |+. ...+++++|+. .++ +.+...++ + ...-..+..|+++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~-----G~~---~~~~V~v~~r~----~~~-~~~~~l~~-~--G~~~~~~~~e~~~~- 84 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAA-----GVL---AAHKIMASSPD----MDL-ATVSALRK-M--GVKLTPHNKETVQH- 84 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----TTS-HHHHHHHH-H--TCEEESCHHHHHHH-
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-----CCC---CcceEEEECCC----ccH-HHHHHHHH-c--CCEEeCChHHHhcc-
Confidence 45899999999999999988753 531 11468888764 110 01111110 0 00011357777775
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEecCCCCC
Q 008629 379 KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPTS 418 (559)
Q Consensus 379 kPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt~ 418 (559)
.|++| ++..+ ...+++++.+... .+..+|.-+||..+
T Consensus 85 -aDvVi-lav~~-~~~~~vl~~l~~~l~~~~ivvs~s~gi~ 122 (322)
T 2izz_A 85 -SDVLF-LAVKP-HIIPFILDEIGADIEDRHIVVSCAAGVT 122 (322)
T ss_dssp -CSEEE-ECSCG-GGHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred -CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 77766 33333 4577788777653 34567888888774
No 170
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=81.01 E-value=9.3 Score=38.41 Aligned_cols=176 Identities=13% Similarity=0.084 Sum_probs=104.5
Q ss_pred hhHHHHHHHHHHHHHh----------------CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEc
Q 008629 278 TASVVLAGVVAALKLI----------------GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 341 (559)
Q Consensus 278 TaaV~LAgll~Alr~~----------------g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD 341 (559)
+|=-+++-+|+..|-. ...|.+.+|.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 85 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 152 (290)
T 3gvx_A 85 VAEHAFALLLAHAKNILENNELMKAGIFRQSPTTLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYT 152 (290)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHHhhhhhhhHhhhcccccCCceeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEe
Confidence 3445666666665521 1458899999999999999999998753 65 688888
Q ss_pred ccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 342 SKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 342 ~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
+.. .. ... ++ ...+|.|+++. .|+++=.- ..-+.|+++.++.|. +..+|.=.|.-.
T Consensus 153 r~~----~~---~~~-----~~---~~~~l~ell~~--aDiV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~aRG~ 212 (290)
T 3gvx_A 153 RSS----VD---QNV-----DV---ISESPADLFRQ--SDFVLIAIPLTDKTRGMVNSRLLANAR---KNLTIVNVARAD 212 (290)
T ss_dssp SSC----CC---TTC-----SE---ECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHHHHTTCC---TTCEEEECSCGG
T ss_pred ccc----cc---ccc-----cc---ccCChHHHhhc--cCeEEEEeeccccchhhhhHHHHhhhh---cCceEEEeehhc
Confidence 752 11 111 11 23579999986 88887432 224678898888886 677888777633
Q ss_pred CCCCCCHHHHhcccCCcEEEeeCCCC--CCceeCCeeeCccCccccccchhhHHHHHHhCCcccCHHHHHHHHHHHHhcc
Q 008629 418 SQSECTAEEAYTWSKGRAIFASGSPF--DPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQV 495 (559)
Q Consensus 418 ~~~EctpedA~~wt~G~aifAsGSPF--~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~~~a~~Itd~m~~aAA~aLA~~v 495 (559)
.--|---.+|++ +|+.-.|.=--| +|. ..-=+..|+.+-|=++=| ....-.+.|...+++-|....
T Consensus 213 ~vd~~aL~~aL~--~g~i~ga~lDV~~~EP~------~pL~~~~nvilTPHiag~----~t~e~~~~~~~~~~~ni~~~~ 280 (290)
T 3gvx_A 213 VVSKPDMIGFLK--ERSDVWYLSDVWWNEPE------ITETNLRNAILSPHVAGG----MSGEIMDIAIQLAFENVRNFF 280 (290)
T ss_dssp GBCHHHHHHHHH--HCTTCEEEESCCTTTTS------CCSCCCSSEEECCSCSSC----BTTBCCHHHHHHHHHHHHHHT
T ss_pred ccCCcchhhhhh--hccceEEeeccccCCcc------cchhhhhhhhcCccccCC----ccchHHHHHHHHHHHHHHhhh
Confidence 212222223332 344332211111 111 111245688888876511 123345678888888887776
Q ss_pred Cc
Q 008629 496 TE 497 (559)
Q Consensus 496 ~~ 497 (559)
.-
T Consensus 281 ~~ 282 (290)
T 3gvx_A 281 EG 282 (290)
T ss_dssp C-
T ss_pred cC
Confidence 53
No 171
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=80.90 E-value=2.2 Score=41.51 Aligned_cols=96 Identities=16% Similarity=0.141 Sum_probs=56.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 378 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 378 (559)
-.||.|+|+|..|..+|..+... |. ..+++++|++. + .+...+..-..+ ....++.++++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~~----~---~~~~~~~~g~~~-~~~~~~~~~~~~- 66 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD-----HP-----HYKIVGYNRSD----R---SRDIALERGIVD-EATADFKVFAAL- 66 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSH----H---HHHHHHHTTSCS-EEESCTTTTGGG-
T ss_pred cceEEEEeeCHHHHHHHHHHHhC-----CC-----CcEEEEEcCCH----H---HHHHHHHcCCcc-cccCCHHHhhcC-
Confidence 35899999999999999988753 32 13688888641 1 111111100000 011356666764
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcC--CCCcEEEecCCC
Q 008629 379 KPTILIGSSGVGRTFTKEVIEAMASF--NEKPLILALSNP 416 (559)
Q Consensus 379 kPtvLIG~S~~~g~Ft~evv~~Ma~~--~erPIIFaLSNP 416 (559)
+|++| ++..+... +++++.+..+ .+..||.-+||-
T Consensus 67 -aDvVi-lavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~ 103 (290)
T 3b1f_A 67 -ADVII-LAVPIKKT-IDFIKILADLDLKEDVIITDAGST 103 (290)
T ss_dssp -CSEEE-ECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSC
T ss_pred -CCEEE-EcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCC
Confidence 78877 44444333 8888888764 456677767763
No 172
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=80.67 E-value=1.6 Score=46.61 Aligned_cols=97 Identities=18% Similarity=0.184 Sum_probs=59.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhc-----cccCCCCCHHHHh
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-----HEHEPVNNLLDAV 375 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA-----~~~~~~~~L~e~V 375 (559)
||.|+|+|..|..+|..|... |. +++++|+.. ++ +....+.+- .......++.|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~~---~~~l~~~~g~~~~~~~i~~~~~~~e~v 63 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-----GF-------KVAVFNRTY----SK---SEEFMKANASAPFAGNLKAFETMEAFA 63 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH----HH---HHHHHHHTTTSTTGGGEEECSCHHHHH
T ss_pred EEEEEChHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----HH---HHHHHHhcCCCCCCCCeEEECCHHHHH
Confidence 799999999999999988653 63 578887641 11 111111100 0011235788888
Q ss_pred ccc-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 008629 376 KVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 417 (559)
Q Consensus 376 ~~v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 417 (559)
+.. ++|++| ++...+...+++++.+.... +.-||.-+||-.
T Consensus 64 ~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~ 106 (478)
T 1pgj_A 64 ASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAH 106 (478)
T ss_dssp HHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred hcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 743 488877 44434335677887775433 456778888854
No 173
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=80.66 E-value=6.6 Score=41.32 Aligned_cols=165 Identities=12% Similarity=0.025 Sum_probs=90.4
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHH
Q 008629 294 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 373 (559)
Q Consensus 294 g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e 373 (559)
+..|.+.++.|+|.|..|..+|+.+.. .|+ +++.+|+.. . .....+ .+ ......+|.|
T Consensus 186 ~~~l~gktvGIIGlG~IG~~vA~~l~a-----~G~-------~V~~~d~~~----~---~~~~~~-~~--G~~~~~~l~e 243 (393)
T 2nac_A 186 AYDLEAMHVGTVAAGRIGLAVLRRLAP-----FDV-------HLHYTDRHR----L---PESVEK-EL--NLTWHATRED 243 (393)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSC----C---CHHHHH-HH--TCEECSSHHH
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHh-----CCC-------EEEEEcCCc----c---chhhHh-hc--CceecCCHHH
Confidence 567999999999999999999998764 264 577777641 1 011111 11 0011247899
Q ss_pred HhcccCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCC--Cce
Q 008629 374 AVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFD--PFE 447 (559)
Q Consensus 374 ~V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~EctpedA~~wt~G~aifAsGSPF~--pv~ 447 (559)
+++. .|+++=.- ...++|+++.++.|. +..+|.=.|.-.---|-.-.+|+ .+|+.--|.--=|. |..
T Consensus 244 ll~~--aDvV~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aRG~~vde~aL~~aL--~~g~i~gA~lDV~~~EP~~ 316 (393)
T 2nac_A 244 MYPV--CDVVTLNCPLHPETEHMINDETLKLFK---RGAYIVNTARGKLCDRDAVARAL--ESGRLAGYAGDVWFPQPAP 316 (393)
T ss_dssp HGGG--CSEEEECSCCCTTTTTCBSHHHHTTSC---TTEEEEECSCGGGBCHHHHHHHH--HTTSEEEEEESCCSSSSCC
T ss_pred HHhc--CCEEEEecCCchHHHHHhhHHHHhhCC---CCCEEEECCCchHhhHHHHHHHH--HcCCeeEEEEEecCCCCCC
Confidence 8885 89888542 224688899888886 56788877763211221122333 35653333211111 110
Q ss_pred eCCeeeCccCccccccchhhHHHHHHhCCcccCHHHHHHHHHHHHhcc
Q 008629 448 YNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQV 495 (559)
Q Consensus 448 ~~G~~~~p~Q~NN~yiFPGlglG~l~~~a~~Itd~m~~aAA~aLA~~v 495 (559)
.+.. -=+..|+.+-|=++-....+ ...|...+++-|....
T Consensus 317 -~~~p--L~~~~nvilTPHia~~T~e~-----~~~~~~~~~~nl~~~~ 356 (393)
T 2nac_A 317 -KDHP--WRTMPYNGMTPHISGTTLTA-----QARYAAGTREILECFF 356 (393)
T ss_dssp -TTCG--GGTSTTBCCCCSCTTCSHHH-----HHHHHHHHHHHHHHHH
T ss_pred -CCCh--hHcCCCEEECCCCCcCcHHH-----HHHHHHHHHHHHHHHH
Confidence 0010 01356888888776422221 1234445555555544
No 174
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=80.26 E-value=2.9 Score=43.00 Aligned_cols=102 Identities=21% Similarity=0.182 Sum_probs=57.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccc----cCCc--CCCchhchhhccccCCCCCHH
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIV----SSRK--DSLQHFKKPWAHEHEPVNNLL 372 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~----~~R~--~~l~~~k~~fA~~~~~~~~L~ 372 (559)
..||.|+|+|+-|..+|..|... | .+++++|++--.. ..+. ..++..+ +.....-..++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~--l~~~i~~t~d~~ 94 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESDHVDEMQAEGVNNRYLPNYP--FPETLKAYCDLK 94 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHHHHHHHHHHSSBTTTBTTCC--CCTTEEEESCHH
T ss_pred CCeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHHHHHHHHHcCCCcccCCCCc--cCCCeEEECCHH
Confidence 36899999999999999988753 5 3577777741100 0000 0011111 000000114688
Q ss_pred HHhcccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 008629 373 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 418 (559)
Q Consensus 373 e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 418 (559)
|+++. +|++| ++... .+.+++++.++.+. +..+|..++|-..
T Consensus 95 ea~~~--aDvVi-laVp~-~~~~~vl~~i~~~l~~~~ivvs~~kGi~ 137 (356)
T 3k96_A 95 ASLEG--VTDIL-IVVPS-FAFHEVITRMKPLIDAKTRIAWGTKGLA 137 (356)
T ss_dssp HHHTT--CCEEE-ECCCH-HHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred HHHhc--CCEEE-ECCCH-HHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 88874 77766 33322 36777777777544 4567777787553
No 175
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=80.04 E-value=1.9 Score=45.00 Aligned_cols=96 Identities=20% Similarity=0.311 Sum_probs=53.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc-----------ccCCC
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-----------EHEPV 368 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~-----------~~~~~ 368 (559)
.||+|+|||-.|..+++.|.+ .|- .-.++.++|++ .++ +......+.. +..+.
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~-----~g~----~~~~V~v~~r~----~~~---~~~la~~l~~~~~~~~~~~~~D~~d~ 65 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAM-----NRE----VFSHITLASRT----LSK---CQEIAQSIKAKGYGEIDITTVDADSI 65 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----CTT----TCCEEEEEESC----HHH---HHHHHHHHHHTTCCCCEEEECCTTCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC----CceEEEEEECC----HHH---HHHHHHHhhhhcCCceEEEEecCCCH
Confidence 389999998666666665543 231 00368888774 111 2222222211 11122
Q ss_pred CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 008629 369 NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 415 (559)
Q Consensus 369 ~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 415 (559)
.++.++++..++|++|=+++.. +..+++++..+. ..++| =+|+
T Consensus 66 ~~l~~~l~~~~~DvVin~ag~~--~~~~v~~a~l~~-g~~vv-D~a~ 108 (405)
T 4ina_A 66 EELVALINEVKPQIVLNIALPY--QDLTIMEACLRT-GVPYL-DTAN 108 (405)
T ss_dssp HHHHHHHHHHCCSEEEECSCGG--GHHHHHHHHHHH-TCCEE-ESSC
T ss_pred HHHHHHHHhhCCCEEEECCCcc--cChHHHHHHHHh-CCCEE-EecC
Confidence 4688889888899999776532 456676665443 33444 2544
No 176
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=79.89 E-value=6.9 Score=41.38 Aligned_cols=71 Identities=25% Similarity=0.379 Sum_probs=48.2
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcc
Q 008629 299 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 377 (559)
Q Consensus 299 d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 377 (559)
--|++|+|+ |.+|.|-++.+... |.. ..++..+|.+ . ..+.. +| +.+.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~l-----Ga~----~~~V~v~D~~--~-~~~g~-------~~-----------~~i~- 262 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKV-----GIP----DANILKWDIK--E-TSRGG-------PF-----------DEIP- 262 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT-----TCC----GGGEEEECHH--H-HTTCS-------CC-----------THHH-
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhC-----CCC----cCceEEeecc--c-cccCC-------ch-----------hhHh-
Confidence 468999999 99999999888653 641 1256667764 1 11111 01 2344
Q ss_pred cCCcEEEeccCC----CCCCCHHHHHHH
Q 008629 378 IKPTILIGSSGV----GRTFTKEVIEAM 401 (559)
Q Consensus 378 vkPtvLIG~S~~----~g~Ft~evv~~M 401 (559)
..|++||+--. |-++|+|.|+.|
T Consensus 263 -~aDivIn~vlig~~aP~Lvt~e~v~~m 289 (394)
T 2qrj_A 263 -QADIFINCIYLSKPIAPFTNMEKLNNP 289 (394)
T ss_dssp -HSSEEEECCCCCSSCCCSCCHHHHCCT
T ss_pred -hCCEEEECcCcCCCCCcccCHHHHhcC
Confidence 38999998764 668999999988
No 177
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=79.51 E-value=3.4 Score=44.66 Aligned_cols=99 Identities=15% Similarity=0.209 Sum_probs=62.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcccc--CCCCCHHHHhc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVK 376 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~--~~~~~L~e~V~ 376 (559)
..+|.|+|+|..|..+|..|... |. +++++|+. .+ .+......-+... ....++.|+++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~----~~---~~~~l~~~g~~g~~i~~~~s~~e~v~ 64 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRT----VS---KVDDFLANEAKGTKVVGAQSLKEMVS 64 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----TH---HHHHHHHTTTTTSSCEECSSHHHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCC----HH---HHHHHHhcccCCCceeccCCHHHHHh
Confidence 35899999999999999988763 64 57778764 11 1222211111110 11357888887
Q ss_pred cc-CCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEecCCCC
Q 008629 377 VI-KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 417 (559)
Q Consensus 377 ~v-kPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 417 (559)
.+ +||++| ++-..+...+++++.+..+ .+..||.-.||-.
T Consensus 65 ~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 65 KLKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp TBCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred hccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 53 488776 4444444567788877654 3567888888844
No 178
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=79.48 E-value=3.5 Score=43.91 Aligned_cols=99 Identities=13% Similarity=0.141 Sum_probs=60.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc-ccCCCCCHHHHhcc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 377 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~ 377 (559)
..||.|+|+|..|..+|..|.. .|. +++++|+. .+ .+......+.. ......++.|+++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~-----~G~-------~V~v~dr~----~~---~~~~l~~~~~~~gi~~~~s~~e~v~~ 65 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVES-----RGY-------TVAIYNRT----TS---KTEEVFKEHQDKNLVFTKTLEEFVGS 65 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS----HH---HHHHHHHHTTTSCEEECSSHHHHHHT
T ss_pred CCcEEEEeeHHHHHHHHHHHHh-----CCC-------EEEEEcCC----HH---HHHHHHHhCcCCCeEEeCCHHHHHhh
Confidence 3589999999999999998875 264 57777763 11 12222211100 01123578888874
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 008629 378 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 417 (559)
Q Consensus 378 v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 417 (559)
. +||++| ++...+...+++++.+.... +..||.-+||-.
T Consensus 66 l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~ 106 (474)
T 2iz1_A 66 LEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTH 106 (474)
T ss_dssp BCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 3 478777 44444445677887776543 456777888854
No 179
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=79.41 E-value=7.1 Score=40.29 Aligned_cols=162 Identities=14% Similarity=0.083 Sum_probs=96.7
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHH
Q 008629 294 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 373 (559)
Q Consensus 294 g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e 373 (559)
|..|.+.+|.|+|.|..|-.+|+.+... |+ +++.+|+.. .. + ..... ......+|.|
T Consensus 155 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~~--~~---~---~~~~~---g~~~~~~l~e 211 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKIGQLVAGYGRAF-----GM-------NVLVWGREN--SK---E---RARAD---GFAVAESKDA 211 (352)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSHH--HH---H---HHHHT---TCEECSSHHH
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhC-----CC-------EEEEECCCC--CH---H---HHHhc---CceEeCCHHH
Confidence 5678999999999999999999988643 65 688888752 10 0 00000 0011257999
Q ss_pred HhcccCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEe-----eCCCCC
Q 008629 374 AVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFD 444 (559)
Q Consensus 374 ~V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~EctpedA~~wt~G~aifA-----sGSPF~ 444 (559)
+++. .|+++=.- ..-+.|+++.++.|. +..++.=.|+-..--|---.+|++ +|+.-.| ..-|.+
T Consensus 212 ll~~--aDiV~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~ 284 (352)
T 3gg9_A 212 LFEQ--SDVLSVHLRLNDETRSIITVADLTRMK---PTALFVNTSRAELVEENGMVTALN--RGRPGMAAIDVFETEPIL 284 (352)
T ss_dssp HHHH--CSEEEECCCCSTTTTTCBCHHHHTTSC---TTCEEEECSCGGGBCTTHHHHHHH--HTSSSEEEECCCSSSCCC
T ss_pred HHhh--CCEEEEeccCcHHHHHhhCHHHHhhCC---CCcEEEECCCchhhcHHHHHHHHH--hCCccEEEecccCCCCCC
Confidence 9986 88887532 234689999998886 677888888744334444445554 4543211 111221
Q ss_pred CceeCCeeeCccCccccccchhhHHHHHHhCCcccCHHHHHHHHHHHHhccC
Q 008629 445 PFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVT 496 (559)
Q Consensus 445 pv~~~G~~~~p~Q~NN~yiFPGlglG~l~~~a~~Itd~m~~aAA~aLA~~v~ 496 (559)
+ .. .-=+..|+.+-|=+|-..-. -.+.|...+++-|.....
T Consensus 285 ~----~~--pL~~~~nvilTPHia~~t~e-----~~~~~~~~~~~ni~~~~~ 325 (352)
T 3gg9_A 285 Q----GH--TLLRMENCICTPHIGYVERE-----SYEMYFGIAFQNILDILQ 325 (352)
T ss_dssp S----CC--GGGGCTTEEECCSCTTCBHH-----HHHHHHHHHHHHHHHHHT
T ss_pred C----CC--hhhcCCCEEECCCCCCCCHH-----HHHHHHHHHHHHHHHHHc
Confidence 1 00 01235688888877421111 124566666777766653
No 180
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=79.33 E-value=1.1 Score=40.46 Aligned_cols=37 Identities=22% Similarity=0.291 Sum_probs=28.5
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
++.+.+|+|+|+|..|..+|+.|... .| .+++++|++
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~----~g-------~~V~vid~~ 72 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRAR----YG-------KISLGIEIR 72 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHH----HC-------SCEEEEESC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhc----cC-------CeEEEEECC
Confidence 35567899999999999999988642 14 358888874
No 181
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=79.21 E-value=1.6 Score=43.74 Aligned_cols=35 Identities=17% Similarity=0.269 Sum_probs=27.7
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 297 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 297 l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
....||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 63 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNRT 63 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred cCCCEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 3456999999999999999998763 63 57777764
No 182
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=79.06 E-value=10 Score=38.85 Aligned_cols=119 Identities=13% Similarity=0.056 Sum_probs=77.5
Q ss_pred CCCeeecCC---cchhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHh
Q 008629 267 THLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 325 (559)
Q Consensus 267 ~~~~FnDDi---QGTaaV~LAgll~Alr~------------------~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~ 325 (559)
.+++.|--- +.+|=-+++.+|+..|- .|..|.+.+|.|+|.|..|..+|+.+..
T Consensus 112 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~----- 186 (335)
T 2g76_A 112 GILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQS----- 186 (335)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHT-----
T ss_pred CeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHH-----
Confidence 455555432 22344467777777664 3567999999999999999999998864
Q ss_pred cCCChhhhcccEEEEcccCccccCCcCCCchhchhhccc-cCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHHH
Q 008629 326 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEA 400 (559)
Q Consensus 326 ~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~-~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv~~ 400 (559)
.|+ +++.+|+.. . .. .+.. .-...+|.|+++. .|+++=.-- ..++|+++.++.
T Consensus 187 ~G~-------~V~~~d~~~----~------~~---~~~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 244 (335)
T 2g76_A 187 FGM-------KTIGYDPII----S------PE---VSASFGVQQLPLEEIWPL--CDFITVHTPLLPSTTGLLNDNTFAQ 244 (335)
T ss_dssp TTC-------EEEEECSSS----C------HH---HHHHTTCEECCHHHHGGG--CSEEEECCCCCTTTTTSBCHHHHTT
T ss_pred CCC-------EEEEECCCc----c------hh---hhhhcCceeCCHHHHHhc--CCEEEEecCCCHHHHHhhCHHHHhh
Confidence 264 588887641 1 10 1111 0011379998885 898885421 235788888888
Q ss_pred HHcCCCCcEEEecCC
Q 008629 401 MASFNEKPLILALSN 415 (559)
Q Consensus 401 Ma~~~erPIIFaLSN 415 (559)
|. +..++.=.|.
T Consensus 245 mk---~gailIN~ar 256 (335)
T 2g76_A 245 CK---KGVRVVNCAR 256 (335)
T ss_dssp SC---TTEEEEECSC
T ss_pred CC---CCcEEEECCC
Confidence 86 6678887777
No 183
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=78.93 E-value=2.3 Score=45.37 Aligned_cols=98 Identities=14% Similarity=0.151 Sum_probs=59.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhch-hhc-cccCCCCCHHHHhcc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA-HEHEPVNNLLDAVKV 377 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~-~fA-~~~~~~~~L~e~V~~ 377 (559)
.||.|+|+|..|..+|..|.. .|. +++++|+.. + .+....+ ... .......++.|+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~-----~G~-------~V~v~dr~~----~---~~~~l~~~~~~g~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMND-----HGF-------VVCAFNRTV----S---KVDDFLANEAKGTKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSST----H---HHHHHHHTTTTTSSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHH-----CCC-------eEEEEeCCH----H---HHHHHHhccccCCCeEEeCCHHHHHhh
Confidence 479999999999999998875 364 578887641 1 1111111 000 000112578888863
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 008629 378 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 417 (559)
Q Consensus 378 v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 417 (559)
+ +||++| ++...+...+++++.+..+. +..||.-+||-.
T Consensus 64 l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~ 104 (482)
T 2pgd_A 64 LKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSE 104 (482)
T ss_dssp BCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 2 588777 44444445677887776443 356788888854
No 184
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=78.93 E-value=1.5 Score=41.38 Aligned_cols=94 Identities=15% Similarity=0.177 Sum_probs=55.3
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhc
Q 008629 297 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 376 (559)
Q Consensus 297 l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~ 376 (559)
-...||.|+|+|..|..+|..+.. .|. +++++|++ .++ +.. ++...-...++.++++
T Consensus 26 ~~~~~I~iiG~G~~G~~la~~l~~-----~g~-------~V~~~~r~----~~~---~~~----~~~~g~~~~~~~~~~~ 82 (215)
T 2vns_A 26 DEAPKVGILGSGDFARSLATRLVG-----SGF-------KVVVGSRN----PKR---TAR----LFPSAAQVTFQEEAVS 82 (215)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS----HHH---HHH----HSBTTSEEEEHHHHTT
T ss_pred CCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCC----HHH---HHH----HHHcCCceecHHHHHh
Confidence 345689999999999999988864 253 58888764 111 111 1111000126888887
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 008629 377 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 418 (559)
Q Consensus 377 ~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 418 (559)
. +|++|=+.. +. ..+++++ ++...+.-+|.-+||+..
T Consensus 83 ~--~DvVi~av~-~~-~~~~v~~-l~~~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 83 S--PEVIFVAVF-RE-HYSSLCS-LSDQLAGKILVDVSNPTE 119 (215)
T ss_dssp S--CSEEEECSC-GG-GSGGGGG-GHHHHTTCEEEECCCCCH
T ss_pred C--CCEEEECCC-hH-HHHHHHH-HHHhcCCCEEEEeCCCcc
Confidence 4 898884333 32 3455554 333235668888999873
No 185
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=78.59 E-value=1.8 Score=42.39 Aligned_cols=32 Identities=19% Similarity=0.300 Sum_probs=26.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.||.|+|+|..|.++|..+... |. +++++|+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 5899999999999999998763 53 57878764
No 186
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=78.59 E-value=2.2 Score=43.01 Aligned_cols=35 Identities=20% Similarity=0.479 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
..||||+|+|.||+..|..|... |- .-+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~-----~~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DP-----SIEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----Cc-----CCeEEEEeCC
Confidence 46899999999999999988653 32 1368888875
No 187
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=78.58 E-value=2.5 Score=41.68 Aligned_cols=32 Identities=22% Similarity=0.380 Sum_probs=25.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.||.|+|+|..|..+|..+.. .|. +++++|+.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~-----~g~-------~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLK-----MGH-------TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 689999999999999998865 253 57888764
No 188
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=78.35 E-value=0.89 Score=42.01 Aligned_cols=94 Identities=15% Similarity=0.176 Sum_probs=58.6
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhc---c--ccCCCCCHHHH
Q 008629 301 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---H--EHEPVNNLLDA 374 (559)
Q Consensus 301 riv~~G-AGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA---~--~~~~~~~L~e~ 374 (559)
||+|+| +|..|..+|..+.. .| .+++++|++ .++ +...++.+. . +.. ..++.++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~-----~g-------~~V~~~~r~----~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~ 61 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT-----LG-------HEIVVGSRR----EEK---AEAKAAEYRRIAGDASIT-GMKNEDA 61 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEESS----HHH---HHHHHHHHHHHHSSCCEE-EEEHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHH-----CC-------CEEEEEeCC----HHH---HHHHHHHhccccccCCCC-hhhHHHH
Confidence 799999 99999999988864 25 258888764 111 111111110 0 011 2468888
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 008629 375 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 418 (559)
Q Consensus 375 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 418 (559)
++. .|++|=+.. +. ..+++++.+....+..+|.-++|+.+
T Consensus 62 ~~~--~D~Vi~~~~-~~-~~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 62 AEA--CDIAVLTIP-WE-HAIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HHH--CSEEEECSC-HH-HHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred Hhc--CCEEEEeCC-hh-hHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 875 898884433 32 35677777654334678999999764
No 189
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=78.35 E-value=3 Score=40.70 Aligned_cols=91 Identities=13% Similarity=0.199 Sum_probs=57.2
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhccc
Q 008629 300 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 378 (559)
Q Consensus 300 ~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 378 (559)
.||.|+|+ |..|..+|..|.. .|. +++++|+. .+ .+...+. + .-...++.++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-----~g~-------~V~~~~r~----~~---~~~~~~~-~---g~~~~~~~~~~~~- 67 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-----SAH-------HLAAIEIA----PE---GRDRLQG-M---GIPLTDGDGWIDE- 67 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----SSS-------EEEEECCS----HH---HHHHHHH-T---TCCCCCSSGGGGT-
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCC-------EEEEEECC----HH---HHHHHHh-c---CCCcCCHHHHhcC-
Confidence 48999999 9999999998865 353 68888764 11 1111111 1 0111356677764
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEecCCCC
Q 008629 379 KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 417 (559)
Q Consensus 379 kPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 417 (559)
+|++|= +..+.. .+++++.+... .+..||.-+|+..
T Consensus 68 -aDvVi~-av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 68 -ADVVVL-ALPDNI-IEKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp -CSEEEE-CSCHHH-HHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred -CCEEEE-cCCchH-HHHHHHHHHHhCCCCCEEEECCCCc
Confidence 888883 333333 68888888754 3456777788854
No 190
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=78.31 E-value=2.8 Score=42.73 Aligned_cols=110 Identities=9% Similarity=0.140 Sum_probs=60.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccC-CcCCCchhc--hhhcc------ccCCCCC
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS-RKDSLQHFK--KPWAH------EHEPVNN 370 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~-R~~~l~~~k--~~fA~------~~~~~~~ 370 (559)
.||.|+|+|.-|..+|..|..+-... . .-..+++++|+..-+... +.+.+.... ..|-. ......+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~----~-~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 96 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNN----Y-LFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSD 96 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHC----T-TBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCcc----C-CCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECC
Confidence 48999999999999999997652110 0 000468888875321000 000011100 00000 0001146
Q ss_pred HHHHhcccCCcEEEeccCCCCCCCHHHHHHHHc----CC-CCcEEEecCCCCC
Q 008629 371 LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMAS----FN-EKPLILALSNPTS 418 (559)
Q Consensus 371 L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~----~~-erPIIFaLSNPt~ 418 (559)
+.|+++. +|++| ++... ...+++++.+.. +. +..+|..++|-.+
T Consensus 97 ~~ea~~~--aDvVi-lav~~-~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 97 LASVIND--ADLLI-FIVPC-QYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp THHHHTT--CSEEE-ECCCH-HHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred HHHHHcC--CCEEE-EcCCH-HHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 7788874 78776 33322 467888888875 33 4568888998653
No 191
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=78.12 E-value=11 Score=38.11 Aligned_cols=122 Identities=16% Similarity=0.162 Sum_probs=77.1
Q ss_pred CCCCeeecCCc---chhHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcChHHHHHHHHHHHH
Q 008629 266 TTHLVFNDDIQ---GTASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 321 (559)
Q Consensus 266 ~~~~~FnDDiQ---GTaaV~LAgll~Alr~---------------------~g~~l~d~riv~~GAGsAgiGia~ll~~~ 321 (559)
..+.+.|---- .+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|-.+|+.+..
T Consensus 89 ~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~- 167 (320)
T 1gdh_A 89 RGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQG- 167 (320)
T ss_dssp TTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHT-
T ss_pred CCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHH-
Confidence 45666665432 2344467777777653 2456889999999999999999998864
Q ss_pred HHHhcCCChhhhcccEEEEcc-cCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHH
Q 008629 322 ISKQTKAPVEETRKKICLVDS-KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKE 396 (559)
Q Consensus 322 ~~~~~G~s~eeA~~~i~lvD~-~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~e 396 (559)
.|. +++.+|+ .. +. ...+..-+ ....+|.|+++. .|+++=.-- ..++++++
T Consensus 168 ----~G~-------~V~~~d~~~~-------~~-~~~~~~g~---~~~~~l~ell~~--aDvVil~~p~~~~t~~~i~~~ 223 (320)
T 1gdh_A 168 ----FDM-------DIDYFDTHRA-------SS-SDEASYQA---TFHDSLDSLLSV--SQFFSLNAPSTPETRYFFNKA 223 (320)
T ss_dssp ----TTC-------EEEEECSSCC-------CH-HHHHHHTC---EECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHH
T ss_pred ----CCC-------EEEEECCCCc-------Ch-hhhhhcCc---EEcCCHHHHHhh--CCEEEEeccCchHHHhhcCHH
Confidence 253 5888887 41 10 00110001 112378888875 888774422 23578888
Q ss_pred HHHHHHcCCCCcEEEecCC
Q 008629 397 VIEAMASFNEKPLILALSN 415 (559)
Q Consensus 397 vv~~Ma~~~erPIIFaLSN 415 (559)
.++.|. +.-+|.-.|.
T Consensus 224 ~l~~mk---~gailIn~ar 239 (320)
T 1gdh_A 224 TIKSLP---QGAIVVNTAR 239 (320)
T ss_dssp HHTTSC---TTEEEEECSC
T ss_pred HHhhCC---CCcEEEECCC
Confidence 888775 5667777776
No 192
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=78.02 E-value=1.6 Score=43.47 Aligned_cols=36 Identities=17% Similarity=0.300 Sum_probs=28.3
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.+...||.|+|+|..|.++|..|... |. +++++|+.
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 41 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS 41 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 34567999999999999999998763 63 57777764
No 193
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=77.65 E-value=1.4 Score=44.84 Aligned_cols=88 Identities=22% Similarity=0.308 Sum_probs=52.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc----ccCCCCCHHHHhc
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----EHEPVNNLLDAVK 376 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~----~~~~~~~L~e~V~ 376 (559)
||+++|||-.|--+|+.|.+ ..++.+.|... . .++..+ +++. +..+..+|.+.++
T Consensus 18 kilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~----~---~~~~~~-~~~~~~~~d~~d~~~l~~~~~ 76 (365)
T 3abi_A 18 KVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN----E---NLEKVK-EFATPLKVDASNFDKLVEVMK 76 (365)
T ss_dssp EEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH----H---HHHHHT-TTSEEEECCTTCHHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH----H---HHHHHh-ccCCcEEEecCCHHHHHHHHh
Confidence 79999999888777766532 13577777531 1 122211 1221 2222346888888
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 008629 377 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 415 (559)
Q Consensus 377 ~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 415 (559)
. .|++|-+ .|.-+...++++-.+... . +|=+|-
T Consensus 77 ~--~DvVi~~--~p~~~~~~v~~~~~~~g~-~-yvD~s~ 109 (365)
T 3abi_A 77 E--FELVIGA--LPGFLGFKSIKAAIKSKV-D-MVDVSF 109 (365)
T ss_dssp T--CSEEEEC--CCGGGHHHHHHHHHHHTC-E-EEECCC
T ss_pred C--CCEEEEe--cCCcccchHHHHHHhcCc-c-eEeeec
Confidence 5 7998854 455688888887655333 2 455664
No 194
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=77.61 E-value=2.2 Score=35.98 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=25.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+.+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~-----~g-------~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE-----KG-------HDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 3589999999999999888764 25 368888874
No 195
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=77.39 E-value=2.1 Score=42.56 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=28.4
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+.+-.||.|+|+|..|..+|..|... |. +++++|+.
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 53 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT 53 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred cccCCEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 34446999999999999999998763 53 57778774
No 196
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=77.17 E-value=2 Score=41.96 Aligned_cols=32 Identities=19% Similarity=0.293 Sum_probs=26.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----GF-------DVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 3799999999999999998764 53 57778764
No 197
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=76.81 E-value=1.7 Score=42.42 Aligned_cols=32 Identities=19% Similarity=0.436 Sum_probs=25.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----GC-------SVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 4899999999999999988763 53 57777764
No 198
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=76.39 E-value=8.5 Score=39.25 Aligned_cols=195 Identities=14% Similarity=0.105 Sum_probs=107.9
Q ss_pred CCCCeeecCC---cchhHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcChHHHHHHHHHHHHH
Q 008629 266 TTHLVFNDDI---QGTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEI 322 (559)
Q Consensus 266 ~~~~~FnDDi---QGTaaV~LAgll~Alr~--------------------~g~~l~d~riv~~GAGsAgiGia~ll~~~~ 322 (559)
..+++.|--- +.+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|-.+|+.+..
T Consensus 89 ~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~-- 166 (330)
T 4e5n_A 89 RGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQG-- 166 (330)
T ss_dssp TTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTT--
T ss_pred cCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHH--
Confidence 4555555422 23344567777776652 2456889999999999999999998753
Q ss_pred HHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHH
Q 008629 323 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVI 398 (559)
Q Consensus 323 ~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv 398 (559)
.|+ +++.+|+... .....+..-+ ...+|.|+++. .|+++=.- ...+.++++.+
T Consensus 167 ---~G~-------~V~~~d~~~~-------~~~~~~~~g~----~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l 223 (330)
T 4e5n_A 167 ---WGA-------TLQYHEAKAL-------DTQTEQRLGL----RQVACSELFAS--SDFILLALPLNADTLHLVNAELL 223 (330)
T ss_dssp ---SCC-------EEEEECSSCC-------CHHHHHHHTE----EECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHH
T ss_pred ---CCC-------EEEEECCCCC-------cHhHHHhcCc----eeCCHHHHHhh--CCEEEEcCCCCHHHHHHhCHHHH
Confidence 364 5888887521 0111111111 12379999886 88887542 23468999999
Q ss_pred HHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCCceeCCeeeCc-------cCccccccchhhHHHH
Q 008629 399 EAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVP-------GQANNAYIFPGFGLGL 471 (559)
Q Consensus 399 ~~Ma~~~erPIIFaLSNPt~~~EctpedA~~wt~G~aifAsGSPF~pv~~~G~~~~p-------~Q~NN~yiFPGlglG~ 471 (559)
+.|. +..+|.=.|+-..--|---.+|+ ..|+.-.|-=-=|++-.+ .....| =+..|+.+-|=++-..
T Consensus 224 ~~mk---~gailIN~arg~~vd~~aL~~aL--~~g~i~gA~lDV~~~E~~-~~~~~Pl~~~~~L~~~~nvilTPHia~~t 297 (330)
T 4e5n_A 224 ALVR---PGALLVNPCRGSVVDEAAVLAAL--ERGQLGGYAADVFEMEDW-ARADRPQQIDPALLAHPNTLFTPHIGSAV 297 (330)
T ss_dssp TTSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEEEESCCGGGCT-TCTTCCSSCCHHHHTCSSEEECSSCTTCC
T ss_pred hhCC---CCcEEEECCCCchhCHHHHHHHH--HhCCccEEEecccccccc-cccCCCCCCCchHHcCCCEEECCcCCCCh
Confidence 8886 67788888774322222223343 345544332111111100 000001 1345777777765322
Q ss_pred HHhCCcccCHHHHHHHHHHHHhccC
Q 008629 472 VISGAIRVHDDMLLAASEALAKQVT 496 (559)
Q Consensus 472 l~~~a~~Itd~m~~aAA~aLA~~v~ 496 (559)
.- -.+.|...+++-|.....
T Consensus 298 ~e-----~~~~~~~~~~~ni~~~~~ 317 (330)
T 4e5n_A 298 RA-----VRLEIERCAAQNILQALA 317 (330)
T ss_dssp HH-----HHHHHHHHHHHHHHHHHT
T ss_pred HH-----HHHHHHHHHHHHHHHHHc
Confidence 11 124566666666666554
No 199
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=76.33 E-value=2.2 Score=40.89 Aligned_cols=96 Identities=13% Similarity=0.184 Sum_probs=56.7
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc-ccCCCCCHHHHhc
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVK 376 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~ 376 (559)
+..||+|.|||-.|..+++.|++ .| .+++.++++. +.+.+. ..+.. +..+..++.++++
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~-----~g-------~~V~~~~r~~-------~~~~~~-~~~~~~Dl~d~~~~~~~~~ 61 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTA-----QG-------HEVTGLRRSA-------QPMPAG-VQTLIADVTRPDTLASIVH 61 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECTT-------SCCCTT-CCEEECCTTCGGGCTTGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCCc-------cccccC-CceEEccCCChHHHHHhhc
Confidence 34689999999888888887765 25 3577777641 112211 11111 2222234556666
Q ss_pred ccCCcEEEeccCCCC-----------CCCHHHHHHHHcCCCCcEEEecC
Q 008629 377 VIKPTILIGSSGVGR-----------TFTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 377 ~vkPtvLIG~S~~~g-----------~Ft~evv~~Ma~~~erPIIFaLS 414 (559)
. ++|++|=+.+... ..+..+++++.+..-+.+||.=|
T Consensus 62 ~-~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 62 L-RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp G-CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred C-CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 4 6999997664321 02567788877665567887544
No 200
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=76.01 E-value=12 Score=38.45 Aligned_cols=161 Identities=14% Similarity=0.110 Sum_probs=92.7
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHH
Q 008629 295 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 374 (559)
Q Consensus 295 ~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 374 (559)
..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|++- .. ... ..+ ......+|.|+
T Consensus 164 ~~l~g~tvGIIG~G~IG~~vA~~l~~-----~G~-------~V~~~d~~~----~~--~~~---~~~--g~~~~~~l~el 220 (347)
T 1mx3_A 164 ARIRGETLGIIGLGRVGQAVALRAKA-----FGF-------NVLFYDPYL----SD--GVE---RAL--GLQRVSTLQDL 220 (347)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECTTS----CT--THH---HHH--TCEECSSHHHH
T ss_pred cCCCCCEEEEEeECHHHHHHHHHHHH-----CCC-------EEEEECCCc----ch--hhH---hhc--CCeecCCHHHH
Confidence 47889999999999999999998864 364 588887641 11 011 111 00112478898
Q ss_pred hcccCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEe-----eCCCCCC
Q 008629 375 VKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDP 445 (559)
Q Consensus 375 V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~EctpedA~~wt~G~aifA-----sGSPF~p 445 (559)
++. .|+++=.- ...++++++.++.|. +..++.=.|+=..--|..-.+|++ +|+.-.| ..-|+++
T Consensus 221 l~~--aDvV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~arg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EP~~~ 293 (347)
T 1mx3_A 221 LFH--SDCVTLHCGLNEHNHHLINDFTVKQMR---QGAFLVNTARGGLVDEKALAQALK--EGRIRGAALDVHESEPFSF 293 (347)
T ss_dssp HHH--CSEEEECCCCCTTCTTSBSHHHHTTSC---TTEEEEECSCTTSBCHHHHHHHHH--HTSEEEEEESCCSSSSCCT
T ss_pred Hhc--CCEEEEcCCCCHHHHHHhHHHHHhcCC---CCCEEEECCCChHHhHHHHHHHHH--hCCCcEEEEeecccCCCCC
Confidence 885 88887532 224678888888885 567888787744223322334443 4554322 2223221
Q ss_pred ceeCCeeeCccCccccccchhhHHHHHHhCCcccCHHHHHHHHHHHHhcc
Q 008629 446 FEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQV 495 (559)
Q Consensus 446 v~~~G~~~~p~Q~NN~yiFPGlglG~l~~~a~~Itd~m~~aAA~aLA~~v 495 (559)
.+.. -=..+|+.+-|=++-.. ....+.|...+++-+....
T Consensus 294 ---~~~~--L~~~~nvi~tPHia~~t-----~~~~~~~~~~~~~ni~~~~ 333 (347)
T 1mx3_A 294 ---SQGP--LKDAPNLICTPHAAWYS-----EQASIEMREEAAREIRRAI 333 (347)
T ss_dssp ---TSST--TTTCSSEEECSSCTTCC-----HHHHHHHHHHHHHHHHHHH
T ss_pred ---CCch--HHhCCCEEEEchHHHHH-----HHHHHHHHHHHHHHHHHHH
Confidence 1111 12478999999776322 1222455555555555554
No 201
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=75.75 E-value=2.5 Score=41.79 Aligned_cols=33 Identities=15% Similarity=0.334 Sum_probs=26.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
..||.|+|+|..|.++|..+.. .|. +++++|++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~-----~G~-------~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTE-----WPG-------GVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTT-----STT-------CEEEECSS
T ss_pred CCeEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEeCC
Confidence 3589999999999999998865 353 57778864
No 202
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=75.64 E-value=3.8 Score=39.60 Aligned_cols=30 Identities=20% Similarity=0.330 Sum_probs=24.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 341 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD 341 (559)
.||.|+|+|..|..+|..+.. .|. +++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLAR-----AGH-------QLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHH-----TTC-------EEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHh-----CCC-------EEEEEc
Confidence 489999999999999998865 253 577776
No 203
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=75.39 E-value=8.6 Score=37.60 Aligned_cols=106 Identities=12% Similarity=0.136 Sum_probs=62.3
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchh----chhhcc-ccCCCCC
Q 008629 297 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF----KKPWAH-EHEPVNN 370 (559)
Q Consensus 297 l~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~----k~~fA~-~~~~~~~ 370 (559)
++..||+|.|| |-.|..+++.|++. |- .-+++.+|+...- .....+... ...+.. +..+..+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g~-----~~~v~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~Dl~d~~~ 89 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQS-----YE-----TYKIINFDALTYS--GNLNNVKSIQDHPNYYFVKGEIQNGEL 89 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHH-----CT-----TEEEEEEECCCTT--CCGGGGTTTTTCTTEEEEECCTTCHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhh-----CC-----CcEEEEEeccccc--cchhhhhhhccCCCeEEEEcCCCCHHH
Confidence 45679999998 88888888887753 52 2357777765321 111111111 111111 1122246
Q ss_pred HHHHhcccCCcEEEeccCCCCCC----------------CHHHHHHHHcCCCCcEEEecC
Q 008629 371 LLDAVKVIKPTILIGSSGVGRTF----------------TKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 371 L~e~V~~vkPtvLIG~S~~~g~F----------------t~evv~~Ma~~~erPIIFaLS 414 (559)
+.++++..++|++|=+.+....- |..+++++.+..-+-+||.=|
T Consensus 90 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 90 LEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp HHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred HHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 88888888899999887754321 366888888776666888543
No 204
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=75.33 E-value=1.8 Score=46.12 Aligned_cols=38 Identities=26% Similarity=0.403 Sum_probs=33.0
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 295 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 295 ~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+.|++.||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 36 ~~L~~~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D 73 (434)
T 1tt5_B 36 FLLDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 73 (434)
T ss_dssp HHHHTCCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECC
T ss_pred HHhcCCEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 345788999999999999999999874 87 789999987
No 205
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=75.28 E-value=5.2 Score=37.16 Aligned_cols=100 Identities=14% Similarity=0.116 Sum_probs=54.8
Q ss_pred CCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhch-hhcc-ccCCCCCH
Q 008629 295 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWAH-EHEPVNNL 371 (559)
Q Consensus 295 ~~l~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~-~fA~-~~~~~~~L 371 (559)
.+|++.+|+|.|| |-.|..+++.|++ .| -++++++++. ++.+.+..... .+.. |.. .++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~R~~----~~~~~~~~~~~~~~~~~Dl~--~~~ 78 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKN-----KG-------HEPVAMVRNE----EQGPELRERGASDIVVANLE--EDF 78 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSG----GGHHHHHHTTCSEEEECCTT--SCC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHh-----CC-------CeEEEEECCh----HHHHHHHhCCCceEEEcccH--HHH
Confidence 4578899999998 7788878877765 35 3688887641 11011111111 1111 111 567
Q ss_pred HHHhcccCCcEEEeccCCCCCC------------CHHHHHHHHcCCCCcEEEecC
Q 008629 372 LDAVKVIKPTILIGSSGVGRTF------------TKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 372 ~e~V~~vkPtvLIG~S~~~g~F------------t~evv~~Ma~~~erPIIFaLS 414 (559)
.++++ ++|++|=+.+....- +..+++++.+..-+-|||.=|
T Consensus 79 ~~~~~--~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 79 SHAFA--SIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp GGGGT--TCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHc--CCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 77777 599999777754210 345666665544455666444
No 206
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=75.13 E-value=3.5 Score=41.67 Aligned_cols=104 Identities=22% Similarity=0.306 Sum_probs=63.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCC--CCHHHHhccc
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVI 378 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~--~~L~e~V~~v 378 (559)
||.|+|||..|..+|-+|+.. |+ ...+.|+|..-=..++-.-+|.+- ..|....... .+-.++++.
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~G~a~DL~h~-~~~~~~~~~i~~~~d~~~~~~- 69 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHA-AAGIDKYPKIVGGADYSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHH-HGGGTCCCEEEEESCGGGGTT-
T ss_pred EEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCCCcchhhhhhhhcc-cccCCCCCeEecCCCHHHhCC-
Confidence 799999999999888877652 55 256999997521111100013321 1222111100 122345664
Q ss_pred CCcEEEeccCCCCC--CC------------HHHHHHHHcCCCCcEEEecCCCC
Q 008629 379 KPTILIGSSGVGRT--FT------------KEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 379 kPtvLIG~S~~~g~--Ft------------~evv~~Ma~~~erPIIFaLSNPt 417 (559)
.|++|=+.+.+.. -| +++++++++++...||.-.|||.
T Consensus 70 -aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPv 121 (294)
T 2x0j_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp -CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred -CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 8998866665421 12 46788888999999999999998
No 207
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=75.13 E-value=2.4 Score=41.25 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=25.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.||.|+|+|..|..+|..+.. .|. +++++|+.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLK-----EGV-------TVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHH-----CCC-------eEEEEeCC
Confidence 589999999999999988864 253 57778764
No 208
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=75.07 E-value=1.3 Score=38.63 Aligned_cols=32 Identities=16% Similarity=0.421 Sum_probs=26.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.+|+|+|+|..|..+|+.|.. .|. +++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~-----~g~-------~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLA-----SDI-------PLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 579999999999999998875 253 68888875
No 209
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=74.88 E-value=2.5 Score=41.87 Aligned_cols=32 Identities=22% Similarity=0.306 Sum_probs=25.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
-||+|+|||.||+-.|-.|.. .|+ ++.++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-----~G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-----HGI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 489999999999999988865 476 46666653
No 210
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=74.54 E-value=3.4 Score=41.44 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=26.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.||.|+|+|..|.++|..+... |. .+++++|+.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5899999999999999988753 51 368888875
No 211
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=73.93 E-value=12 Score=37.23 Aligned_cols=34 Identities=26% Similarity=0.362 Sum_probs=27.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
..||.|+|+|..|.++|..|... |. ++++++|+.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCC
Confidence 35899999999999999999864 53 478888874
No 212
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=73.92 E-value=1.5 Score=45.00 Aligned_cols=108 Identities=18% Similarity=0.253 Sum_probs=65.3
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcccc--CCCCCHHH
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLD 373 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~--~~~~~L~e 373 (559)
+....||.|+|||..|.++|-.++.. |+ ...+.|+|.+-=..++-.-+|.+. ..|.... ....+..
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~~~d~~- 83 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMK-----DL-----ADELALVDVIEDKLKGEMMDLQHG-SLFLKTPKIVSSKDYS- 83 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGCSCCEEEECSSGG-
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEeCChHHHHHHHHhhhhh-hhccCCCeEEEcCCHH-
Confidence 34567999999999999999888652 54 257999997410000000012221 1232211 0113444
Q ss_pred HhcccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 374 AVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 374 ~V~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
+++. .|++|=+.+.+ |- +-+++.+.|+++|+.-+|+-.|||.
T Consensus 84 ~~~~--aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv 139 (331)
T 4aj2_A 84 VTAN--SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPV 139 (331)
T ss_dssp GGTT--EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred HhCC--CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChH
Confidence 4664 88887444433 31 1256788888999999999999998
No 213
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=73.60 E-value=3 Score=41.04 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=28.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
..+|+|+|||.||+..|..|.+ .|. .++.++|+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 5689999999999999998864 353 2699999874
No 214
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=73.52 E-value=2.1 Score=44.14 Aligned_cols=120 Identities=21% Similarity=0.213 Sum_probs=65.5
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhc---cccCCCCCHHHH
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---HEHEPVNNLLDA 374 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA---~~~~~~~~L~e~ 374 (559)
++.||+|+|+|.+|-.+|+.|.+. .++.++|+. .++ +......+. -+..+..+|.++
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~----~~~---a~~la~~~~~~~~d~~~~~~l~~l 74 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVN----NEN---LEKVKEFATPLKVDASNFDKLVEV 74 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESC----HHH---HHHHTTTSEEEECCTTCHHHHHHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECC----HHH---HHHHHhhCCeEEEecCCHHHHHHH
Confidence 357999999999999988877531 357777774 221 222211121 011122468888
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCCc
Q 008629 375 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPF 446 (559)
Q Consensus 375 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~EctpedA~~wt~G~aifAsGSPF~pv 446 (559)
++. +|++|=+.. . .+..+++++-.+ ..=.++-+|.-....+.--++|.+ .|. .+..|+=|+|-
T Consensus 75 l~~--~DvVIn~~P-~-~~~~~v~~a~l~--~G~~~vD~s~~~~~~~~l~~~Ak~--aG~-~~l~g~G~dPG 137 (365)
T 2z2v_A 75 MKE--FELVIGALP-G-FLGFKSIKAAIK--SKVDMVDVSFMPENPLELRDEAEK--AQV-TIVFDAGFAPG 137 (365)
T ss_dssp HTT--CSCEEECCC-H-HHHHHHHHHHHH--TTCCEEECCCCSSCGGGGHHHHHH--TTC-EEECSCBTTTB
T ss_pred HhC--CCEEEECCC-h-hhhHHHHHHHHH--hCCeEEEccCCcHHHHHHHHHHHH--cCC-EEEECCCCcch
Confidence 884 899997632 2 356677665433 222356677622112122344433 453 34455557664
No 215
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=73.48 E-value=7.5 Score=39.05 Aligned_cols=93 Identities=16% Similarity=0.178 Sum_probs=53.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHH-Hhccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD-AVKVI 378 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e-~V~~v 378 (559)
.||.|+|+|..|..+|..+... |. ..+++++|++- +.+...++.-+.+ ....++.| +++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-----G~-----~~~V~~~dr~~-------~~~~~a~~~G~~~-~~~~~~~~~~~~~- 94 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-----GF-----KGKIYGYDINP-------ESISKAVDLGIID-EGTTSIAKVEDFS- 94 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCH-------HHHHHHHHTTSCS-EEESCTTGGGGGC-
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-----CC-----CCEEEEEECCH-------HHHHHHHHCCCcc-hhcCCHHHHhhcc-
Confidence 7999999999999999988763 65 14788888741 1111111000000 01135666 6664
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEecC
Q 008629 379 KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALS 414 (559)
Q Consensus 379 kPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLS 414 (559)
+|++| ++.... -.+++++.+..+ .+.-||.-.+
T Consensus 95 -aDvVi-lavp~~-~~~~vl~~l~~~l~~~~iv~d~~ 128 (314)
T 3ggo_A 95 -PDFVM-LSSPVR-TFREIAKKLSYILSEDATVTDQG 128 (314)
T ss_dssp -CSEEE-ECSCGG-GHHHHHHHHHHHSCTTCEEEECC
T ss_pred -CCEEE-EeCCHH-HHHHHHHHHhhccCCCcEEEECC
Confidence 77777 444443 356677776643 3455665444
No 216
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=72.90 E-value=2.2 Score=47.85 Aligned_cols=37 Identities=30% Similarity=0.429 Sum_probs=33.2
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+|++.||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 14 kL~~s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D 50 (640)
T 1y8q_B 14 AVAGGRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLD 50 (640)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECC
T ss_pred HHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 57789999999999999999999875 87 789999987
No 217
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=72.21 E-value=1.6 Score=43.21 Aligned_cols=101 Identities=14% Similarity=0.114 Sum_probs=59.1
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCc---hh---chhhcc-ccCC
Q 008629 296 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ---HF---KKPWAH-EHEP 367 (559)
Q Consensus 296 ~l~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~---~~---k~~fA~-~~~~ 367 (559)
+++..+|+|.|| |--|-.|++.|++ .| .+++.+++..- ...+.+. .. ...+.. +..+
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~-----~g-------~~V~~l~R~~~---~~~~~~~~~~~l~~~~v~~~~~Dl~d 71 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLD-----AH-------RPTYILARPGP---RSPSKAKIFKALEDKGAIIVYGLINE 71 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSC---CCHHHHHHHHHHHHTTCEEEECCTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CCEEEEECCCC---CChhHHHHHHHHHhCCcEEEEeecCC
Confidence 345578999999 8888888887765 25 35888877520 0000011 00 011111 1122
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCC-CCHHHHHHHHcCC-CCcEEE
Q 008629 368 VNNLLDAVKVIKPTILIGSSGVGRT-FTKEVIEAMASFN-EKPLIL 411 (559)
Q Consensus 368 ~~~L~e~V~~vkPtvLIG~S~~~g~-Ft~evv~~Ma~~~-erPIIF 411 (559)
..+|.++++..++|++|=+.+.... -+..+++++.+.. -+-+|+
T Consensus 72 ~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 72 QEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred HHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 2468888886779999988775432 3788999988765 455554
No 218
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=72.09 E-value=14 Score=37.87 Aligned_cols=46 Identities=22% Similarity=0.377 Sum_probs=28.4
Q ss_pred HHHHHHHhC-CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 286 VVAALKLIG-GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 286 ll~Alr~~g-~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
.+.|+.... ..-..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 200 a~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 246 (404)
T 3ip1_A 200 AYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKH-----AGA------SKVILSEP 246 (404)
T ss_dssp HHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred HHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 344443333 33457899999998777655544432 364 57887765
No 219
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=72.06 E-value=1.8 Score=44.34 Aligned_cols=110 Identities=17% Similarity=0.152 Sum_probs=67.1
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC---ccccCCcCCCchhchhhccccCCCCCHHHHh
Q 008629 300 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG---LIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 375 (559)
Q Consensus 300 ~riv~~G-AGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G---Li~~~R~~~l~~~k~~fA~~~~~~~~L~e~V 375 (559)
.||+|.| ||..|..+|-+|+. .|+-.++-.-.+.|+|... .+.-... +|.+.-.+|.++.....++.+++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~-----~~~~~e~~~~~l~L~Di~~~~~~~~g~a~-DL~~~~~~~~~~~~~~~~~~~~~ 77 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGN-----GSVFGKDQPIILVLLDITPMMGVLDGVLM-ELQDCALPLLKDVIATDKEEIAF 77 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHH-HHHHTCCTTEEEEEEESCHHHHT
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CCCccccCCCEEEEEeCCCccccchhhHh-hhHhhhhcccCCEEEcCCcHHHh
Confidence 5899999 79999988887764 3541110111289999852 1111111 14332223433222224688888
Q ss_pred cccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcE-EEecCCCC
Q 008629 376 KVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPL-ILALSNPT 417 (559)
Q Consensus 376 ~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPI-IFaLSNPt 417 (559)
+. .|++|=+.+.+ |- ..+++++.+.+++.+-+ |+-.|||.
T Consensus 78 ~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPv 132 (333)
T 5mdh_A 78 KD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPA 132 (333)
T ss_dssp TT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCch
Confidence 86 89888555433 21 24678888888888874 88899997
No 220
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=71.87 E-value=3 Score=40.35 Aligned_cols=34 Identities=12% Similarity=0.341 Sum_probs=28.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
..+|+|+|||.||+..|..|.. .|+ ++.++|+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 4689999999999999998865 364 589999864
No 221
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=71.74 E-value=1.7 Score=44.78 Aligned_cols=106 Identities=12% Similarity=0.106 Sum_probs=64.1
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcccc--CCCCCHHHHh
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAV 375 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~--~~~~~L~e~V 375 (559)
...||.|+|||..|.++|-.++.. |+ ...+.++|.+-=..++-.-+|.+. ..|.... ....++.+ +
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~-----g~-----~~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~t~d~~~-~ 87 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMK-----DL-----ADEVALVDVMEDKLKGEMMDLEHG-SLFLHTAKIVSGKDYSV-S 87 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHH-----CC-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSCCSEEEEESSSCS-C
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECCHHHHHHHHHHhhhh-hhcccCCeEEEcCCHHH-h
Confidence 347999999999999999988763 65 247999997310000000012221 1232211 01134544 5
Q ss_pred cccCCcEEEeccCC---CCC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 376 KVIKPTILIGSSGV---GRT-----------FTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 376 ~~vkPtvLIG~S~~---~g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
+. .|++|=+.+. +|- .-+++++.+.++++.-+|+-.|||.
T Consensus 88 ~d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPv 141 (330)
T 3ldh_A 88 AG--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELG 141 (330)
T ss_dssp SS--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred CC--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCcc
Confidence 54 8988833333 331 1256777888999999999999997
No 222
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=71.70 E-value=2.2 Score=44.14 Aligned_cols=107 Identities=17% Similarity=0.340 Sum_probs=63.9
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccc-cCCCCCHHHH
Q 008629 297 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDA 374 (559)
Q Consensus 297 l~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~-~~~~~~L~e~ 374 (559)
+...||.|+|| |..|..+|-.++. .|+. ..+.++|.+-=..++-.-+|.+. .|... ..-..++.++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~~-----~evvLiDi~~~k~~g~a~DL~~~--~~~~~~i~~t~d~~~a 73 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRLT-----PNLCLYDPFAVGLEGVAEEIRHC--GFEGLNLTFTSDIKEA 73 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTCC-----SCEEEECSCHHHHHHHHHHHHHH--CCTTCCCEEESCHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCCC-----CEEEEEeCCchhHHHHHHhhhhC--cCCCCceEEcCCHHHH
Confidence 34679999998 9999999865544 3652 46999997410000000013322 23110 0011478888
Q ss_pred hcccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcE-EEecCCCC
Q 008629 375 VKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPL-ILALSNPT 417 (559)
Q Consensus 375 V~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPI-IFaLSNPt 417 (559)
++. .|++|=+.+.+ |- .-+++++.+.+++..-+ |+-.|||.
T Consensus 74 l~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPv 129 (343)
T 3fi9_A 74 LTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPA 129 (343)
T ss_dssp HTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSH
T ss_pred hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCch
Confidence 886 89888554433 21 23466777888998885 88899997
No 223
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=71.60 E-value=10 Score=41.21 Aligned_cols=99 Identities=15% Similarity=0.237 Sum_probs=56.2
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCc-hhchhhcc-c--cCCCCC-HH
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAH-E--HEPVNN-LL 372 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~-~~k~~fA~-~--~~~~~~-L~ 372 (559)
-+.||||+|||+.|-++|.+|++- .++. ..+|.+.|++- .+.+ +. .....+.. . ..+... |.
T Consensus 12 ~~~rVlIIGaGgVG~~va~lla~~----~dv~----~~~I~vaD~~~----~~~~-~~~~~g~~~~~~~Vdadnv~~~l~ 78 (480)
T 2ph5_A 12 FKNRFVILGFGCVGQALMPLIFEK----FDIK----PSQVTIIAAEG----TKVD-VAQQYGVSFKLQQITPQNYLEVIG 78 (480)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHH----BCCC----GGGEEEEESSC----CSCC-HHHHHTCEEEECCCCTTTHHHHTG
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC----CCCc----eeEEEEeccch----hhhh-HHhhcCCceeEEeccchhHHHHHH
Confidence 357899999999999999999764 3442 24688888751 1111 21 11112221 1 111112 33
Q ss_pred HHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 008629 373 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 415 (559)
Q Consensus 373 e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 415 (559)
..|+. +|++|=+| ...++.+++++-.+. .=-.+-++|
T Consensus 79 aLl~~--~DvVIN~s--~~~~~l~Im~aclea--Gv~YlDTa~ 115 (480)
T 2ph5_A 79 STLEE--NDFLIDVS--IGISSLALIILCNQK--GALYINAAT 115 (480)
T ss_dssp GGCCT--TCEEEECC--SSSCHHHHHHHHHHH--TCEEEESSC
T ss_pred HHhcC--CCEEEECC--ccccCHHHHHHHHHc--CCCEEECCC
Confidence 45654 59999655 335788888876531 223455665
No 224
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=71.14 E-value=3.5 Score=37.96 Aligned_cols=94 Identities=14% Similarity=0.146 Sum_probs=53.6
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchh-----chhhcc-ccCCCCCHH
Q 008629 300 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-----KKPWAH-EHEPVNNLL 372 (559)
Q Consensus 300 ~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~-----k~~fA~-~~~~~~~L~ 372 (559)
.+|+|.|| |-.|-.+++.|++. .|. ++++++++. + ..+... +..+.. |..+..++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~----~g~-------~V~~~~r~~----~--~~~~~~~~~~~~~~~~~~D~~d~~~~~ 68 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTY----TDM-------HITLYGRQL----K--TRIPPEIIDHERVTVIEGSFQNPGXLE 68 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHH----CCC-------EEEEEESSH----H--HHSCHHHHTSTTEEEEECCTTCHHHHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhc----CCc-------eEEEEecCc----c--ccchhhccCCCceEEEECCCCCHHHHH
Confidence 35999996 77777777777621 363 678777651 1 012111 111111 222224577
Q ss_pred HHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEe
Q 008629 373 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILA 412 (559)
Q Consensus 373 e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFa 412 (559)
++++ +.|++|=+.+..+.-++.+++.|.+..-+-|||.
T Consensus 69 ~~~~--~~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~i 106 (221)
T 3r6d_A 69 QAVT--NAEVVFVGAMESGSDMASIVKALSRXNIRRVIGV 106 (221)
T ss_dssp HHHT--TCSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHc--CCCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEE
Confidence 7887 4899997776432226777888876554456653
No 225
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=70.57 E-value=3.8 Score=38.66 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=26.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.+|+|+|||.||+..|..|.. .|. ++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGR-----ARK-------NILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCC
Confidence 589999999999999988865 353 68899974
No 226
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=70.48 E-value=3 Score=40.54 Aligned_cols=32 Identities=16% Similarity=0.295 Sum_probs=25.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.||.|+|+|..|..+|..+.. .|. +++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLK-----AGY-------SLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-----TTC-------EEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 489999999999999988865 253 57888764
No 227
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=70.07 E-value=12 Score=36.55 Aligned_cols=104 Identities=14% Similarity=0.220 Sum_probs=58.6
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchh-chhhcc-ccCCCCCHH
Q 008629 296 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-KKPWAH-EHEPVNNLL 372 (559)
Q Consensus 296 ~l~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~-k~~fA~-~~~~~~~L~ 372 (559)
.++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.. ....+.+... +..+.. +..+..++.
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~l~~~~~~~~~~~Dl~d~~~~~ 82 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLE-----RG-------DKVVGIDNFA---TGRREHLKDHPNLTFVEGSIADHALVN 82 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCCCTTEEEEECCTTCHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhHhhcCCceEEEEeCCCHHHHH
Confidence 355678999985 7777777776654 25 3688887741 1111112110 111111 212223577
Q ss_pred HHhcccCCcEEEeccCCCCC-------------CCHHHHHHHHcCCCCcEEEecC
Q 008629 373 DAVKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 373 e~V~~vkPtvLIG~S~~~g~-------------Ft~evv~~Ma~~~erPIIFaLS 414 (559)
++++..++|++|=+.+.... -+..+++++.+..-+.|||.=|
T Consensus 83 ~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 137 (333)
T 2q1w_A 83 QLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT 137 (333)
T ss_dssp HHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 78877789999988775432 0345777777665568888543
No 228
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=69.86 E-value=2.7 Score=44.93 Aligned_cols=178 Identities=16% Similarity=0.182 Sum_probs=92.5
Q ss_pred cccccccCcchHHHHHhcCCCCCeeEEEEec--------------------CceecccCCCCCccccchhHHHHHHhH--
Q 008629 159 GLYISLKEKGKILEVLKNWPERSIQVIVVTD--------------------GERILGLGDLGCQGMGIPVGKLALYTA-- 216 (559)
Q Consensus 159 Glyis~~d~g~i~~~l~nwp~~~v~viVVTD--------------------G~rILGLGDlG~~GmgI~iGKl~LY~a-- 216 (559)
|.|.+..|...+.++|+.. +++++++.| |+++=-+-++|-.-.-|.++....+++
T Consensus 177 G~~~~~~D~~eik~lL~~~---Gi~v~~~~d~s~~ld~~~~~~~~~~~~~gg~~~~ei~~~~~A~~ni~~~~~~~~~A~~ 253 (458)
T 3pdi_B 177 SANLTPGDLEYIAESIESF---GLRPLLIPDLSGSLDGHLDENRFNALTTGGLSVAELATAGQSVATLVVGQSLAGAADA 253 (458)
T ss_dssp CTTCCHHHHHHHHHHHHTT---TCEEEEESCHHHHSSSCCCSSCCTTCCSCSBCHHHHGGGSSCSCEEEESGGGHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHc---CCEEEEecCccccccCccccccccccCCCCCCHHHHHhhhhCcEEEEecHHHHHHHHH
Confidence 6666667777888888754 688888854 333333334443333343433322221
Q ss_pred ---hcCCCCC----cchhHhHHHHHHHHHHhhCCCeeeeeccCCCCcHHHHHHHHcCCCCeeecCCcchhHHHHHHHHHH
Q 008629 217 ---LGGIRPS----AEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAA 289 (559)
Q Consensus 217 ---~gGI~P~----~~y~~~vdefv~av~~~fGp~~lIq~EDf~~~~Af~lL~ryr~~~~~FnDDiQGTaaV~LAgll~A 289 (559)
=-|+.=. +.=-+-.|+|+..+.+.+|- ..| +.+++.|.+ ++.+
T Consensus 254 Le~~~GiP~~~~~~p~G~~~T~~~l~~la~~~g~----~~~--------~~i~~er~r------------------~~~~ 303 (458)
T 3pdi_B 254 LAERTGVPDRRFGMLYGLDAVDAWLMALAEISGN----PVP--------DRYKRQRAQ------------------LQDA 303 (458)
T ss_dssp HHHHSCCCEEEECCSCHHHHHHHHHHHHHHHHSS----CCC--------HHHHHHHHH------------------HHHH
T ss_pred HHHHHCCCEEecCCCcCHHHHHHHHHHHHHHHCC----chH--------HHHHHHHHH------------------HHHH
Confidence 1233211 12233467777777777753 111 123333221 1222
Q ss_pred HHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccc-cCCC
Q 008629 290 LKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPV 368 (559)
Q Consensus 290 lr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~-~~~~ 368 (559)
+.-....|...|++|+|-+.-..++++.|.+ .|+.. +.+.-. ...+.+... +...- ..+.
T Consensus 304 ~~d~~~~l~Gkrv~i~~~~~~~~~l~~~L~e-----lGm~v------v~~~~~------~~~~~~~~~--~~~~v~~~D~ 364 (458)
T 3pdi_B 304 MLDTHFMLSSARTAIAADPDLLLGFDALLRS-----MGAHT------VAAVVP------ARAAALVDS--PLPSVRVGDL 364 (458)
T ss_dssp HHHHHHHHTTCEEEEECCHHHHHHHHHHHHT-----TTCEE------EEEEES------SCCSCCTTT--TSSCEEESHH
T ss_pred HHHHHHhcCCCEEEEECCcHHHHHHHHHHHH-----CCCEE------EEEEEC------CCChhhhhC--ccCcEEeCCH
Confidence 2222245778999999999999999998843 48732 222211 111111111 00000 0111
Q ss_pred CCHHHHhcccCCcEEEeccC
Q 008629 369 NNLLDAVKVIKPTILIGSSG 388 (559)
Q Consensus 369 ~~L~e~V~~vkPtvLIG~S~ 388 (559)
..|++.++..+||.+||-|-
T Consensus 365 ~~le~~i~~~~pDllig~~~ 384 (458)
T 3pdi_B 365 EDLEHAARAGQAQLVIGNSH 384 (458)
T ss_dssp HHHHHHHHHHTCSEEEECTT
T ss_pred HHHHHHHHhcCCCEEEEChh
Confidence 24777888999999999654
No 229
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=69.75 E-value=5.9 Score=36.26 Aligned_cols=95 Identities=11% Similarity=0.156 Sum_probs=52.3
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhccc
Q 008629 300 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 378 (559)
Q Consensus 300 ~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 378 (559)
.||+|.|| |-.|-.+++.|++ .| .++++++++. ++.+.+...-..+.-+..+..++.++++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 67 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-----RG-------FEVTAVVRHP----EKIKIENEHLKVKKADVSSLDEVCEVCKG- 67 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-----TT-------CEEEEECSCG----GGCCCCCTTEEEECCCTTCHHHHHHHHTT-
T ss_pred CEEEEEcCCchHHHHHHHHHHH-----CC-------CEEEEEEcCc----ccchhccCceEEEEecCCCHHHHHHHhcC-
Confidence 58999996 6666666666653 25 3688888752 11111211111111122222457788874
Q ss_pred CCcEEEeccCCCC----------CCCHHHHHHHHcCCCCcEEEe
Q 008629 379 KPTILIGSSGVGR----------TFTKEVIEAMASFNEKPLILA 412 (559)
Q Consensus 379 kPtvLIG~S~~~g----------~Ft~evv~~Ma~~~erPIIFa 412 (559)
+|++|=+.+... ..+..++++|.+..-+.+||.
T Consensus 68 -~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ 110 (227)
T 3dhn_A 68 -ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMV 110 (227)
T ss_dssp -CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred -CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 899998765431 024556777766555556663
No 230
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=69.49 E-value=6.4 Score=39.78 Aligned_cols=41 Identities=22% Similarity=0.361 Sum_probs=26.3
Q ss_pred HHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 008629 371 LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 415 (559)
Q Consensus 371 L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 415 (559)
+...++..|||++||..+-. --.....|+....|+|.=-+|
T Consensus 84 ~~~~l~~~~PDvVi~~g~~~----s~p~~laA~~~~iP~vihe~n 124 (365)
T 3s2u_A 84 ALRVIRQLRPVCVLGLGGYV----TGPGGLAARLNGVPLVIHEQN 124 (365)
T ss_dssp HHHHHHHHCCSEEEECSSST----HHHHHHHHHHTTCCEEEEECS
T ss_pred HHHHHHhcCCCEEEEcCCcc----hHHHHHHHHHcCCCEEEEecc
Confidence 34568888999999986643 111222345567899875555
No 231
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=69.41 E-value=20 Score=37.43 Aligned_cols=114 Identities=13% Similarity=0.136 Sum_probs=63.0
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhc
Q 008629 297 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 376 (559)
Q Consensus 297 l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~ 376 (559)
++.+||+|+|.|.+|++.|+.+.+ .|. ++...|++-..... ..|. .-.++-. . ..-.+.++
T Consensus 3 ~~~~~v~viG~G~~G~~~a~~l~~-----~G~-------~v~~~D~~~~~~~~--~~l~-~G~~~~~---g-~~~~~~~~ 63 (439)
T 2x5o_A 3 YQGKNVVIIGLGLTGLSCVDFFLA-----RGV-------TPRVMDTRMTPPGL--DKLP-EAVERHT---G-SLNDEWLM 63 (439)
T ss_dssp CTTCCEEEECCHHHHHHHHHHHHT-----TTC-------CCEEEESSSSCTTG--GGSC-TTSCEEE---S-SCCHHHHH
T ss_pred CCCCEEEEEeecHHHHHHHHHHHh-----CCC-------EEEEEECCCCcchh--HHhh-CCCEEEE---C-CCcHHHhc
Confidence 567899999999999999866643 464 57788886321100 1121 1111100 0 11255665
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCCceeCCee
Q 008629 377 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKV 452 (559)
Q Consensus 377 ~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~EctpedA~~wt~G~aifAsGSPF~pv~~~G~~ 452 (559)
.++.+|=.++.+- -++++..+.. ...|++ +. .|-++...+.+.|-.||| ||||
T Consensus 64 --~~d~vV~s~gi~~-~~p~~~~a~~--~~~~v~-------~~----~~~~~~~~~~~vI~VTGT-------nGKT 116 (439)
T 2x5o_A 64 --AADLIVASPGIAL-AHPSLSAAAD--AGIEIV-------GD----IELFCREAQAPIVAITGS-------NGKS 116 (439)
T ss_dssp --TCSEEEECTTSCT-TCHHHHHHHH--TTCEEE-------CH----HHHHHHHCCSCEEEEECS-------SSHH
T ss_pred --cCCEEEeCCCCCC-CCHHHHHHHH--CCCcEE-------EH----HHHHHHhcCCCEEEEECC-------CCHH
Confidence 4787775555542 3566665443 123443 11 223333355778888997 7774
No 232
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=69.03 E-value=4.3 Score=38.72 Aligned_cols=33 Identities=21% Similarity=0.251 Sum_probs=27.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
..+|+|+|||.||+..|..+.. .|. ++.++|+.
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSAR-----YML-------KTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHH-----CCC-------cEEEEecc
Confidence 4689999999999999988865 253 58999997
No 233
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=69.01 E-value=4.7 Score=39.95 Aligned_cols=93 Identities=19% Similarity=0.269 Sum_probs=53.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhc---c--------cc-CC
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---H--------EH-EP 367 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA---~--------~~-~~ 367 (559)
.||.|+|+|..|..+|..|.. .| .+++++|++.= + +...++... . .. ..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~-----~g-------~~V~~~~r~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLAL-----KG-------QSVLAWDIDAQ----R---IKEIQDRGAIIAEGPGLAGTAHPDLL 65 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSCHH----H---HHHHHHHTSEEEESSSCCEEECCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeCCHH----H---HHHHHhcCCeEEecccccccccccee
Confidence 589999999999999988765 25 25788877410 0 111111000 0 00 01
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCC
Q 008629 368 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSN 415 (559)
Q Consensus 368 ~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSN 415 (559)
..++.++++ ++|++|=+.. . -..+++++.+..+. +..+|+.+.|
T Consensus 66 ~~~~~~~~~--~~D~vi~~v~-~-~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 66 TSDIGLAVK--DADVILIVVP-A-IHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp ESCHHHHHT--TCSEEEECSC-G-GGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred cCCHHHHHh--cCCEEEEeCC-c-hHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 246778776 4787763332 2 23578888876543 3455666644
No 234
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=68.94 E-value=4.8 Score=38.27 Aligned_cols=36 Identities=25% Similarity=0.285 Sum_probs=26.9
Q ss_pred CcccceEEEeCc-Ch-HHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 296 TLAEHRFLFLGA-GE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 296 ~l~d~riv~~GA-Gs-AgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.++++++||.|| |+ .|..+|+.+++ .|. +++++|++
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~-----~G~-------~V~~~~r~ 56 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALL-----EGA-------DVVISDYH 56 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHH-----CCC-------EEEEecCC
Confidence 478899999999 64 77777777765 363 58888764
No 235
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=68.83 E-value=4.4 Score=38.92 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=27.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
..+|||+|||.||+..|..|.. .|. ++.++|+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM-----RQA-------SVKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cceEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcC
Confidence 3589999999999999988765 353 68899886
No 236
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=68.81 E-value=4.4 Score=40.62 Aligned_cols=37 Identities=19% Similarity=0.108 Sum_probs=27.6
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
+.+..+|+|+|||.||+..|..|.+ .|+ ++.++|+.-
T Consensus 8 ~m~~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~v~viE~~~ 44 (379)
T 3alj_A 8 PGKTRRAEVAGGGFAGLTAAIALKQ-----NGW-------DVRLHEKSS 44 (379)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecCC
Confidence 3456799999999999999988865 364 588888754
No 237
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=68.71 E-value=9.1 Score=37.49 Aligned_cols=103 Identities=17% Similarity=0.170 Sum_probs=60.1
Q ss_pred CCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCc---CCCchhchhhcc-ccCCCC
Q 008629 295 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK---DSLQHFKKPWAH-EHEPVN 369 (559)
Q Consensus 295 ~~l~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~---~~l~~~k~~fA~-~~~~~~ 369 (559)
.+++..+|+|.|| |-.|..+++.|++ .| -+++++|+.. .... +.+. ...+.. +..+..
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~l~--~v~~~~~Dl~d~~ 78 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLP-----QG-------HEILVIDNFA---TGKREVLPPVA--GLSVIEGSVTDAG 78 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGG-----GT-------CEEEEEECCS---SSCGGGSCSCT--TEEEEECCTTCHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhhhccC--CceEEEeeCCCHH
Confidence 4577889999998 7777777766653 25 3688887741 1100 1111 111111 212223
Q ss_pred CHHHHhcccCCcEEEeccCCCCC-C------------CHHHHHHHHcCCCCcEEEecC
Q 008629 370 NLLDAVKVIKPTILIGSSGVGRT-F------------TKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 370 ~L~e~V~~vkPtvLIG~S~~~g~-F------------t~evv~~Ma~~~erPIIFaLS 414 (559)
++.++++.+++|++|=+.+.... - +..+++++.+..-+.|||.=|
T Consensus 79 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 136 (330)
T 2pzm_A 79 LLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQT 136 (330)
T ss_dssp HHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 57777876679999988876532 0 345677776655567888544
No 238
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=68.23 E-value=4.2 Score=39.83 Aligned_cols=31 Identities=23% Similarity=0.390 Sum_probs=24.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
-|+|+|||.||+..|..|.+ .|+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~-----~G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 38999999999999988865 375 46677764
No 239
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=68.21 E-value=4.4 Score=39.30 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=27.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
..+|+|+|||.||+..|..+.. .|. ++.++|++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM-----RGL-------SFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 4689999999999999988754 253 688999863
No 240
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=68.05 E-value=3.7 Score=46.42 Aligned_cols=35 Identities=26% Similarity=0.461 Sum_probs=31.3
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
++.||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d 444 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 444 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCC
Confidence 788999999999999999988764 87 789999987
No 241
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=67.97 E-value=4.5 Score=41.20 Aligned_cols=36 Identities=31% Similarity=0.476 Sum_probs=29.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 345 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 345 (559)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~ 37 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ-----AKYP-----GRIALINDEKH 37 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEECCSSS
T ss_pred CCEEEEcChHHHHHHHHHHHh-----hCcC-----CCEEEEeCCCC
Confidence 589999999999999998865 3642 37999998753
No 242
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=67.71 E-value=3.6 Score=42.55 Aligned_cols=34 Identities=21% Similarity=0.308 Sum_probs=26.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.||||+|+|.||+..|..|... +- .-+|.++|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MP-----DLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CT-----TCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----Cc-----CCeEEEEcCC
Confidence 4799999999999999998653 21 1368888875
No 243
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=67.63 E-value=8.5 Score=36.67 Aligned_cols=20 Identities=30% Similarity=0.459 Sum_probs=18.3
Q ss_pred eEEEeCcChHHHHHHHHHHH
Q 008629 301 RFLFLGAGEAGTGIAELIAL 320 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~ 320 (559)
||.|+|+|..|..+|..|..
T Consensus 2 ~I~iIG~G~mG~~la~~l~~ 21 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRS 21 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHH
T ss_pred eEEEEechHHHHHHHHHHHH
Confidence 79999999999999998875
No 244
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=67.49 E-value=14 Score=34.11 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=54.5
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhc-cccCCCCCHHHH
Q 008629 297 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-HEHEPVNNLLDA 374 (559)
Q Consensus 297 l~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA-~~~~~~~~L~e~ 374 (559)
++..+++|.|| |-.|-.+++.|++. |. ..+++++|++. ++.+.+......+. -|..+..++.++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~-----G~-----~~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~ 81 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQ-----GL-----FSKVTLIGRRK----LTFDEEAYKNVNQEVVDFEKLDDYASA 81 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHH-----TC-----CSEEEEEESSC----CCCCSGGGGGCEEEECCGGGGGGGGGG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcC-----CC-----CCEEEEEEcCC----CCccccccCCceEEecCcCCHHHHHHH
Confidence 44578999995 66676777766542 52 12688888752 11111111111111 121222356667
Q ss_pred hcccCCcEEEeccCCCCC-------------CCHHHHHHHHcCCCCcEEEecC
Q 008629 375 VKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 375 V~~vkPtvLIG~S~~~g~-------------Ft~evv~~Ma~~~erPIIFaLS 414 (559)
++ ++|++|=+.+.... -+..+++.|.+...+-|||.=|
T Consensus 82 ~~--~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 82 FQ--GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp GS--SCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hc--CCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 76 58999988775310 1345666666554455666433
No 245
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=67.40 E-value=12 Score=36.56 Aligned_cols=97 Identities=15% Similarity=0.169 Sum_probs=57.7
Q ss_pred CCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHH
Q 008629 295 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 373 (559)
Q Consensus 295 ~~l~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e 373 (559)
++++..+|+|.|| |-.|-.+++.|++ .|. +++.+|+.. .. ..+... .-+..+..++.+
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~-----~G~-------~V~~~~r~~----~~-~~~~~~----~~Dl~d~~~~~~ 73 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRT-----QGR-------TVRGFDLRP----SG-TGGEEV----VGSLEDGQALSD 73 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHH-----TTC-------CEEEEESSC----CS-SCCSEE----ESCTTCHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHh-----CCC-------EEEEEeCCC----CC-CCccEE----ecCcCCHHHHHH
Confidence 4577889999998 8888888877765 353 577777641 11 111111 112222245778
Q ss_pred HhcccCCcEEEeccCCCCCC--------------CHHHHHHHHcCCCCcEEEecC
Q 008629 374 AVKVIKPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 374 ~V~~vkPtvLIG~S~~~g~F--------------t~evv~~Ma~~~erPIIFaLS 414 (559)
+++ ++|++|=+.+....- |..+++++.+..-+.|||.=|
T Consensus 74 ~~~--~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 74 AIM--GVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp HHT--TCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHh--CCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 887 699999887654211 345788888777778998655
No 246
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=67.38 E-value=4 Score=39.32 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
..+|||+|||.||+..|..|.. .|+ ++.++|+.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLAR-----AEI-------KPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 4689999999999999988875 364 58889884
No 247
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=66.53 E-value=7.8 Score=31.47 Aligned_cols=84 Identities=17% Similarity=0.184 Sum_probs=50.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhch---hhc-cccCCCCCHHHH
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK---PWA-HEHEPVNNLLDA 374 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~---~fA-~~~~~~~~L~e~ 374 (559)
..+|+|+|+|..|..+++.+.. .|. .+++++|++. .+ +...+. .+. -+.....++.++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~-----~g~------~~v~~~~r~~----~~---~~~~~~~~~~~~~~d~~~~~~~~~~ 66 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKT-----SSN------YSVTVADHDL----AA---LAVLNRMGVATKQVDAKDEAGLAKA 66 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----CSS------EEEEEEESCH----HH---HHHHHTTTCEEEECCTTCHHHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHh-----CCC------ceEEEEeCCH----HH---HHHHHhCCCcEEEecCCCHHHHHHH
Confidence 4689999999999999888765 352 3688888741 11 111110 111 011111346666
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcC
Q 008629 375 VKVIKPTILIGSSGVGRTFTKEVIEAMASF 404 (559)
Q Consensus 375 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~ 404 (559)
++ ++|++|=+. |..++..+++.+.+.
T Consensus 67 ~~--~~d~vi~~~--~~~~~~~~~~~~~~~ 92 (118)
T 3ic5_A 67 LG--GFDAVISAA--PFFLTPIIAKAAKAA 92 (118)
T ss_dssp TT--TCSEEEECS--CGGGHHHHHHHHHHT
T ss_pred Hc--CCCEEEECC--CchhhHHHHHHHHHh
Confidence 66 589988665 334677777776543
No 248
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=66.28 E-value=15 Score=37.52 Aligned_cols=85 Identities=24% Similarity=0.359 Sum_probs=65.7
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCc
Q 008629 277 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 355 (559)
Q Consensus 277 GTaaV~LAgll~Alr~~g~~l~d~riv~~GAGs-AgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~ 355 (559)
+..-+|-.|++--|+-.+.+|+..++|++|.+. -|.-+|-||.. .|. .+.++.++
T Consensus 157 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~-----~~A-------TVTi~Hs~------------ 212 (303)
T 4b4u_A 157 AYGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQ-----ANA-------TVTICHSR------------ 212 (303)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT------------
T ss_pred cccCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHh-----cCC-------EEEEecCC------------
Confidence 344578889999999999999999999999664 57777777654 243 34544332
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHH
Q 008629 356 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIE 399 (559)
Q Consensus 356 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~ 399 (559)
.++|.+.+++ +|+||-..+.++.++.++||
T Consensus 213 ------------T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk 242 (303)
T 4b4u_A 213 ------------TQNLPELVKQ--ADIIVGAVGKAELIQKDWIK 242 (303)
T ss_dssp ------------CSSHHHHHHT--CSEEEECSCSTTCBCGGGSC
T ss_pred ------------CCCHHHHhhc--CCeEEeccCCCCcccccccc
Confidence 1357888885 99999999999999999997
No 249
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=66.23 E-value=16 Score=35.22 Aligned_cols=93 Identities=12% Similarity=0.177 Sum_probs=58.1
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc-ccCCCCCHHHHhcc
Q 008629 300 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 377 (559)
Q Consensus 300 ~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~ 377 (559)
.||+|.|| |-.|..+++.|++ .| .+++.+++. .+..+ +. ...+.. +.. ..++.++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~----~~~~~-~~--~~~~~~~Dl~-~~~~~~~~~- 61 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKN-----DG-------NTPIILTRS----IGNKA-IN--DYEYRVSDYT-LEDLINQLN- 61 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESC----CC--------CCEEEECCCC-HHHHHHHTT-
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCC----CCccc-CC--ceEEEEcccc-HHHHHHhhc-
Confidence 58999995 8888888877765 25 368888875 22211 22 111211 222 345777777
Q ss_pred cCCcEEEeccCCCCCC------------CHHHHHHHHcCCCCcEEEecC
Q 008629 378 IKPTILIGSSGVGRTF------------TKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 378 vkPtvLIG~S~~~g~F------------t~evv~~Ma~~~erPIIFaLS 414 (559)
++|++|=+.+..+.- +..+++++.+..-+.+||.=|
T Consensus 62 -~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 62 -DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp -TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 699999887764321 467888888776667888544
No 250
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=69.45 E-value=1.2 Score=41.92 Aligned_cols=92 Identities=11% Similarity=0.079 Sum_probs=53.3
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhc
Q 008629 297 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 376 (559)
Q Consensus 297 l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~ 376 (559)
+.+.||.|+|+|..|..+|..+... |. +++++|+.-- + +.+. ...-...++.|+++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~-----G~-------~V~~~~r~~~----~-~~~~-------~~g~~~~~~~~~~~ 72 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQC-----GY-------SVVFGSRNPQ----V-SSLL-------PRGAEVLCYSEAAS 72 (201)
Confidence 4567899999999999999888653 42 4667766411 1 1111 11111125666666
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 377 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 377 ~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
. +|++| ++..+. -+++++ .++...+..+|.-+||..
T Consensus 73 ~--aDvVi-lav~~~-~~~~v~-~l~~~~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 73 R--SDVIV-LAVHRE-HYDFLA-ELADSLKGRVLIDVSNNQ 108 (201)
Confidence 3 77766 333332 345565 233233456888888876
No 251
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=65.78 E-value=11 Score=36.58 Aligned_cols=101 Identities=15% Similarity=0.240 Sum_probs=56.4
Q ss_pred ccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcC--CCchh----chhhcc-ccCCCC
Q 008629 298 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD--SLQHF----KKPWAH-EHEPVN 369 (559)
Q Consensus 298 ~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~--~l~~~----k~~fA~-~~~~~~ 369 (559)
++.+|+|.|| |-.|..+++.|++ .| .+++.+|+.. +..+ .+... +..+.. |..+..
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 65 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLE-----KG-------YEVYGADRRS----GEFASWRLKELGIENDVKIIHMDLLEFS 65 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECSCC----STTTTHHHHHTTCTTTEEECCCCTTCHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CC-------CEEEEEECCC----cccccccHhhccccCceeEEECCCCCHH
Confidence 4578999998 7777777777654 25 3688887642 1100 01000 111111 111223
Q ss_pred CHHHHhcccCCcEEEeccCCCCC------C----------CHHHHHHHHcCCC-CcEEEecC
Q 008629 370 NLLDAVKVIKPTILIGSSGVGRT------F----------TKEVIEAMASFNE-KPLILALS 414 (559)
Q Consensus 370 ~L~e~V~~vkPtvLIG~S~~~g~------F----------t~evv~~Ma~~~e-rPIIFaLS 414 (559)
++.++++.+++|++|=+.+.... + +..+++++.+... +.|||.=|
T Consensus 66 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 66 NIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp HHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 57788888889999988875421 0 3345555554433 67887644
No 252
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=65.68 E-value=4.8 Score=39.03 Aligned_cols=33 Identities=15% Similarity=0.279 Sum_probs=27.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
..+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGR-----AQL-------STLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----cCC-------cEEEEeCC
Confidence 4689999999999999988765 253 68999987
No 253
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=65.51 E-value=6.8 Score=39.79 Aligned_cols=103 Identities=22% Similarity=0.313 Sum_probs=64.3
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCC--CCCHHHHhcc
Q 008629 301 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP--VNNLLDAVKV 377 (559)
Q Consensus 301 riv~~G-AGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~--~~~L~e~V~~ 377 (559)
||.|+| +|..|..+|-+|... .++ ...+.|+|..-. .++..-+|.+. ++-..-.. ..+..++.+.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~-----~~el~L~Di~~~-~~G~a~Dl~~~--~~~~~v~~~~~~~~~~~~~~ 69 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPS-----GSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGEDATPALEG 69 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCT-----TEEEEEECSSTT-HHHHHHHHHTS--CSSEEEEEECSSCCHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCC-----CceEEEEecCCC-chhHHHHhhCC--CCCceEEEecCCCcHHHhCC
Confidence 799999 899999998777542 244 257999999741 11110012221 11000000 1246777876
Q ss_pred cCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 378 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 378 vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
.|++|=+.+.+ |- .-+++++.+.++++.-+|+-.|||.
T Consensus 70 --aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv 121 (312)
T 3hhp_A 70 --ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPV 121 (312)
T ss_dssp --CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred --CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcc
Confidence 99888665543 21 1246777888899999999999998
No 254
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=65.32 E-value=15 Score=36.11 Aligned_cols=32 Identities=22% Similarity=0.451 Sum_probs=25.6
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~G-AGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.||.|+| +|..|..+|..+.. .|. +++++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~-----~G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRA-----SGY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHT-----TTC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 4899999 99999999998864 353 58888764
No 255
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=65.22 E-value=5.3 Score=40.76 Aligned_cols=38 Identities=13% Similarity=0.233 Sum_probs=29.9
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCc
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 345 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 345 (559)
...+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQ-----NGFE-----GRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHc-----cCcC-----CCEEEEecCCC
Confidence 35789999999999999999865 3642 36899988643
No 256
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=64.88 E-value=50 Score=33.59 Aligned_cols=111 Identities=14% Similarity=0.151 Sum_probs=71.6
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHH
Q 008629 294 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 373 (559)
Q Consensus 294 g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e 373 (559)
|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+. .+ + ......+ ...+|.|
T Consensus 136 ~~~l~g~tvGIiG~G~IG~~va~~~~~f-----g~-------~v~~~d~~-----~~-~---~~~~~~~----~~~~l~e 190 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVLCYDVV-----KR-E---DLKEKGC----VYTSLDE 190 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS-----CC-H---HHHHTTC----EECCHHH
T ss_pred cceecCcEEEEECcchHHHHHHHhhccc-----Cc-------eeeecCCc-----cc-h---hhhhcCc----eecCHHH
Confidence 4678899999999999999999888653 65 57777753 11 1 1111111 1257999
Q ss_pred HhcccCCcEEEec----cCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcc--cCCcEEEe
Q 008629 374 AVKVIKPTILIGS----SGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW--SKGRAIFA 438 (559)
Q Consensus 374 ~V~~vkPtvLIG~----S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~EctpedA~~w--t~G~aifA 438 (559)
.++. .|+++=. ...-+.|+++.++.|. +..++.=.|. -++-=|+|+-. ..|+.--|
T Consensus 191 ll~~--sDivslh~Plt~~T~~li~~~~l~~mk---~~a~lIN~aR----G~iVde~aL~~aL~~g~i~gA 252 (334)
T 3kb6_A 191 LLKE--SDVISLHVPYTKETHHMINEERISLMK---DGVYLINTAR----GKVVDTDALYRAYQRGKFSGL 252 (334)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTEEEEECSC----GGGBCHHHHHHHHHTTCEEEE
T ss_pred HHhh--CCEEEEcCCCChhhccCcCHHHHhhcC---CCeEEEecCc----cccccHHHHHHHHHhCCceEE
Confidence 9986 8888743 1224799999999996 5667665444 55555554422 35665433
No 257
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=64.83 E-value=5.7 Score=40.73 Aligned_cols=36 Identities=28% Similarity=0.450 Sum_probs=27.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCcc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 346 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi 346 (559)
.-||||+|||.||+..|..|. ..| .+|.++|+.--+
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~-----~~~-------~~itlie~~~~~ 44 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAAL-----GKC-------DDITMINSEKYL 44 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHT-----TTC-------SCEEEECSSSSC
T ss_pred CCCEEEEcCcHHHHHHHHHHh-----CCC-------CEEEEEECCCCC
Confidence 458999999999999999981 123 479999886443
No 258
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=64.72 E-value=23 Score=34.94 Aligned_cols=101 Identities=15% Similarity=0.218 Sum_probs=60.7
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCch-hchhhcc-ccC-CCCCH
Q 008629 296 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAH-EHE-PVNNL 371 (559)
Q Consensus 296 ~l~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~-~k~~fA~-~~~-~~~~L 371 (559)
++...||+|.|| |-.|..+++.|++. .| -+++.+|+.. ++...+.. .+..+.. +.. +..++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~----~~~~~~~~~~~v~~~~~Dl~~d~~~~ 85 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT----DRLGDLVKHERMHFFEGDITINKEWV 85 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC----TTTGGGGGSTTEEEEECCTTTCHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh----hhhhhhccCCCeEEEeCccCCCHHHH
Confidence 466789999995 88888888877652 24 3688888742 11111111 1112221 222 22357
Q ss_pred HHHhcccCCcEEEeccCCCC----------------CCCHHHHHHHHcCCCCcEEEecC
Q 008629 372 LDAVKVIKPTILIGSSGVGR----------------TFTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 372 ~e~V~~vkPtvLIG~S~~~g----------------~Ft~evv~~Ma~~~erPIIFaLS 414 (559)
.++++ ++|++|=+.+... .-|..+++++.+.. +.+||.=|
T Consensus 86 ~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS 141 (372)
T 3slg_A 86 EYHVK--KCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPST 141 (372)
T ss_dssp HHHHH--HCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECC
T ss_pred HHHhc--cCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCc
Confidence 77887 4999997666432 23567899888777 88998655
No 259
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=64.63 E-value=6.3 Score=34.95 Aligned_cols=32 Identities=22% Similarity=0.384 Sum_probs=26.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
-+++|+|+|.+|+-.|..+... | .++.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCC
Confidence 3799999999999999888652 5 468889875
No 260
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=64.55 E-value=23 Score=38.27 Aligned_cols=120 Identities=19% Similarity=0.127 Sum_probs=76.1
Q ss_pred CCCCeeecCCc---chhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHH
Q 008629 266 TTHLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 324 (559)
Q Consensus 266 ~~~~~FnDDiQ---GTaaV~LAgll~Alr~------------------~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~ 324 (559)
..+.+.|---- .+|=-+++-+|+..|- .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 88 ~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~---- 163 (529)
T 1ygy_A 88 RGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAA---- 163 (529)
T ss_dssp TTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHT----
T ss_pred CCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHh----
Confidence 45555554322 2344577777776653 2567899999999999999999998864
Q ss_pred hcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHH
Q 008629 325 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 400 (559)
Q Consensus 325 ~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~ 400 (559)
.|+ +++.+|+.- .+ ...+ .+ .-...+|.|+++. .|+++=+. ...++++++.+..
T Consensus 164 -~G~-------~V~~~d~~~----~~----~~a~-~~---g~~~~~l~e~~~~--aDvV~l~~P~~~~t~~~i~~~~~~~ 221 (529)
T 1ygy_A 164 -FGA-------YVVAYDPYV----SP----ARAA-QL---GIELLSLDDLLAR--ADFISVHLPKTPETAGLIDKEALAK 221 (529)
T ss_dssp -TTC-------EEEEECTTS----CH----HHHH-HH---TCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred -CCC-------EEEEECCCC----Ch----hHHH-hc---CcEEcCHHHHHhc--CCEEEECCCCchHHHHHhCHHHHhC
Confidence 264 588887641 11 1111 00 0011278898885 88887543 2245777777766
Q ss_pred HHcCCCCcEEEecC
Q 008629 401 MASFNEKPLILALS 414 (559)
Q Consensus 401 Ma~~~erPIIFaLS 414 (559)
|. +..+|.=.|
T Consensus 222 ~k---~g~ilin~a 232 (529)
T 1ygy_A 222 TK---PGVIIVNAA 232 (529)
T ss_dssp SC---TTEEEEECS
T ss_pred CC---CCCEEEECC
Confidence 64 567888777
No 261
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=64.25 E-value=6.1 Score=37.58 Aligned_cols=33 Identities=15% Similarity=0.156 Sum_probs=26.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEE-Eccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL-VDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~l-vD~~ 343 (559)
..+|||+|||.||+..|..|... |. ++.+ +|+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 35899999999999999988763 54 4666 8873
No 262
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=64.24 E-value=3.3 Score=45.26 Aligned_cols=38 Identities=18% Similarity=0.305 Sum_probs=33.1
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 295 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 295 ~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.+|+..||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 28 ~~L~~~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D 65 (531)
T 1tt5_A 28 EALESAHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGN 65 (531)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCC
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 357789999999999999999998864 87 799999986
No 263
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=64.08 E-value=6.7 Score=39.59 Aligned_cols=34 Identities=12% Similarity=0.203 Sum_probs=26.8
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
...+|+|+|||.||+..|-.|.. .|+ ++.++|+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~ 37 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD-----AGV-------DVDVYERS 37 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 45689999999999999988875 364 46777765
No 264
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=63.88 E-value=5.4 Score=40.48 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=27.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
.+|||+|||.||+..|..|.+..- .| .++.++|+.-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~--~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG--SK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG--GG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC--CC-------CeEEEEeCCC
Confidence 479999999999999999876211 13 4688888664
No 265
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=63.86 E-value=5.8 Score=39.86 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~V~viE~~~ 39 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGR-----QGH-------RVVVVEQAR 39 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCC
Confidence 4689999999999999988865 364 577888753
No 266
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=63.84 E-value=5.7 Score=40.15 Aligned_cols=36 Identities=17% Similarity=0.431 Sum_probs=28.6
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 297 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 297 l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
..+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 345799999999999999988764 364 688888764
No 267
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=63.82 E-value=6.3 Score=38.87 Aligned_cols=34 Identities=15% Similarity=0.206 Sum_probs=27.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
..+|||+|||.||+..|..+.. .|+ ++.++|+..
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 47 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGM-----NNI-------SCRIIESMP 47 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 5689999999999999987754 353 688998863
No 268
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=63.70 E-value=7.7 Score=39.00 Aligned_cols=34 Identities=32% Similarity=0.459 Sum_probs=27.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
+-+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 38 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQK 38 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 3589999999999999987754 364 588999874
No 269
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=63.70 E-value=5.3 Score=39.56 Aligned_cols=34 Identities=21% Similarity=0.318 Sum_probs=27.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
+-.|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~-----~G~-------~V~l~E~~~ 37 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKRP 37 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 4579999999999999988865 364 577787764
No 270
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=63.56 E-value=6.1 Score=38.22 Aligned_cols=33 Identities=24% Similarity=0.402 Sum_probs=27.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+.+|+|+|+|.||+..|..+.+ .|. ++.++|+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAAR-----SGF-------SVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCC
Confidence 4689999999999999988865 363 58899985
No 271
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=63.53 E-value=6.2 Score=39.82 Aligned_cols=36 Identities=14% Similarity=0.187 Sum_probs=27.2
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 297 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 297 l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
.+.-+|+|+|||.||+..|-.|.+ .|+ ++.++|+..
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQ-----SGI-------DCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 345689999999999999988865 364 577777753
No 272
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=63.47 E-value=5.5 Score=41.27 Aligned_cols=42 Identities=26% Similarity=0.376 Sum_probs=31.2
Q ss_pred HhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCc
Q 008629 292 LIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 345 (559)
Q Consensus 292 ~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 345 (559)
+.++.-+..+|+|+|||.||+..|..|.+ .| .++.++++..-
T Consensus 4 ~~~~~~~~~~v~IIGaG~aGl~aA~~L~~-----~g-------~~v~v~E~~~~ 45 (489)
T 2jae_A 4 LIGKVKGSHSVVVLGGGPAGLCSAFELQK-----AG-------YKVTVLEARTR 45 (489)
T ss_dssp CCCCCCSCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred hhhcccCCCCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEeccCC
Confidence 34444456799999999999999988865 25 36778877643
No 273
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=63.44 E-value=6.6 Score=38.14 Aligned_cols=33 Identities=21% Similarity=0.399 Sum_probs=27.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+..|+|+|||.+|+.+|-.|.+ .|. ++.++|+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~-----~G~-------~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA-----GGH-------EVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 4589999999999999988875 364 68899987
No 274
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=63.42 E-value=5 Score=38.55 Aligned_cols=30 Identities=20% Similarity=0.335 Sum_probs=23.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
||.|+|+|..|..+|..+.. |. +++++|+.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~------g~-------~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR------RF-------PTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT------TS-------CEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHhC------CC-------eEEEEeCC
Confidence 79999999999999988742 42 47777763
No 275
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=63.38 E-value=6.4 Score=38.91 Aligned_cols=35 Identities=23% Similarity=0.356 Sum_probs=28.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 345 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 345 (559)
+..|+|+|||.+|+.+|-.|.+ .|+ ++.++|+..+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~-----~G~-------~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAK-----ENK-------NTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCCC
Confidence 4689999999999999998875 364 6899998643
No 276
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=63.19 E-value=6.7 Score=33.64 Aligned_cols=34 Identities=21% Similarity=0.453 Sum_probs=26.7
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+..+|+|+|+|..|..+|+.|.. .|. +++++|++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~-----~g~-------~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTA-----AGK-------KVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEECC
Confidence 34689999999999999998875 353 68888874
No 277
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=63.04 E-value=9 Score=38.19 Aligned_cols=86 Identities=23% Similarity=0.247 Sum_probs=48.0
Q ss_pred HHHHHHHHHH-HhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchh
Q 008629 282 VLAGVVAALK-LIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP 360 (559)
Q Consensus 282 ~LAgll~Alr-~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~ 360 (559)
.++..+.+++ ..+. ..++|+|.|||..|...+.+... .|. ++++.+|+. .+| ++..++.
T Consensus 149 ~~~ta~~~l~~~~~~--~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~----~~~---~~~~~~l 208 (343)
T 2dq4_A 149 PFGNAVHTVYAGSGV--SGKSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDPN----PYR---LAFARPY 208 (343)
T ss_dssp HHHHHHHHHHSTTCC--TTSCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC----HHH---HGGGTTT
T ss_pred HHHHHHHHHHHhCCC--CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----HHH---HHHHHHh
Confidence 4444456666 4433 88999999998777766655433 363 468888753 111 1111211
Q ss_pred hcccc--CCCCCHHHHhcc---cCCcEEEeccC
Q 008629 361 WAHEH--EPVNNLLDAVKV---IKPTILIGSSG 388 (559)
Q Consensus 361 fA~~~--~~~~~L~e~V~~---vkPtvLIG~S~ 388 (559)
|... ....++.+.++. -+.|++|=+++
T Consensus 209 -a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g 240 (343)
T 2dq4_A 209 -ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSG 240 (343)
T ss_dssp -CSEEECTTTSCHHHHHHHHHSSCEEEEEECSC
T ss_pred -HHhccCcCccCHHHHHHHhcCCCCCEEEECCC
Confidence 2210 111356665553 25788887766
No 278
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=62.62 E-value=13 Score=35.44 Aligned_cols=97 Identities=11% Similarity=0.035 Sum_probs=57.2
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc-ccCCCCCHHHHhccc
Q 008629 301 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 378 (559)
Q Consensus 301 riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~v 378 (559)
||+|.|| |-.|-.+++.|.+ +.| .++..++++. ++...+......+.. |-.+..+|.++++.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~----~~g-------~~V~~~~R~~----~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~- 65 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIA----NHI-------DHFHIGVRNV----EKVPDDWRGKVSVRQLDYFNQESMVEAFKG- 65 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHH----TTC-------TTEEEEESSG----GGSCGGGBTTBEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEEcCCchHHHHHHHHHhh----CCC-------CcEEEEECCH----HHHHHhhhCCCEEEEcCCCCHHHHHHHHhC-
Confidence 6899996 8888888877543 114 3577776642 111112111112211 22222468888885
Q ss_pred CCcEEEeccCCCCC------CCHHHHHHHHcCCCCcEEEecC
Q 008629 379 KPTILIGSSGVGRT------FTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 379 kPtvLIG~S~~~g~------Ft~evv~~Ma~~~erPIIFaLS 414 (559)
.|++|=+++.... -++.++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 66 -MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp -CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 8999988765421 2467888888777677888543
No 279
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=62.60 E-value=6.8 Score=39.73 Aligned_cols=35 Identities=26% Similarity=0.318 Sum_probs=26.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
+.+|+|+|||.||+..|..|.+ .|+ +++.++|+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~-----~G~------~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQ-----AGI------GKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCC
Confidence 4689999999999999988865 375 2277777653
No 280
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=62.47 E-value=6.2 Score=40.40 Aligned_cols=38 Identities=21% Similarity=0.420 Sum_probs=28.8
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 294 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 294 g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
+..+++..|||+|||.+|+.+|-.|.+. | ..++.++|+
T Consensus 18 ~~~m~~~dVvIIGgGiaGls~A~~La~~-----G------~~~V~vlE~ 55 (448)
T 3axb_A 18 GSHMPRFDYVVVGAGVVGLAAAYYLKVW-----S------GGSVLVVDA 55 (448)
T ss_dssp ---CCEEEEEEECCSHHHHHHHHHHHHH-----H------CSCEEEEES
T ss_pred cccCCcCCEEEECcCHHHHHHHHHHHhC-----C------CCcEEEEcc
Confidence 3445677999999999999999988763 4 136899998
No 281
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=62.47 E-value=23 Score=34.07 Aligned_cols=95 Identities=13% Similarity=0.216 Sum_probs=53.2
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 008629 301 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 379 (559)
Q Consensus 301 riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 379 (559)
+|+|.|| |-.|..+++.|++ .| .++.+++.. ..+.+.+...-..+.-+..+ .++.++++ +
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~-----~g--------~~v~~~~~~---~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~--~ 63 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSE-----SN--------EIVVIDNLS---SGNEEFVNEAARLVKADLAA-DDIKDYLK--G 63 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-----TS--------CEEEECCCS---SCCGGGSCTTEEEECCCTTT-SCCHHHHT--T
T ss_pred EEEEECCCchHHHHHHHHHHh-----CC--------CEEEEEcCC---CCChhhcCCCcEEEECcCCh-HHHHHHhc--C
Confidence 7899997 6677667666643 24 344444321 11111111111111113333 57888887 5
Q ss_pred CcEEEeccCCCCC-C---------------CHHHHHHHHcCCCCcEEEecC
Q 008629 380 PTILIGSSGVGRT-F---------------TKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 380 PtvLIG~S~~~g~-F---------------t~evv~~Ma~~~erPIIFaLS 414 (559)
+|++|-+.+.+.. . +..++++|.+..-+.|||.=|
T Consensus 64 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 64 AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp CSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 9999988875421 1 234778887766678998655
No 282
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=62.42 E-value=6.2 Score=38.18 Aligned_cols=33 Identities=21% Similarity=0.347 Sum_probs=26.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
.+|+|+|||.+|+..|..|.+ .|+ ++.++|+..
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~-----~G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEECCC
Confidence 479999999999999988875 365 588888763
No 283
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=62.13 E-value=12 Score=35.45 Aligned_cols=93 Identities=14% Similarity=0.185 Sum_probs=55.3
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHH
Q 008629 296 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 374 (559)
Q Consensus 296 ~l~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 374 (559)
.++..||+|.|| |-.|..+++.|++ .|-.. ....- .+...+ -+..+..++.++
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g~~~---~~~~~--------------~~~~~~----~D~~d~~~~~~~ 56 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVAD-----GAGLP---GEDWV--------------FVSSKD----ADLTDTAQTRAL 56 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHT-----TTCCT---TCEEE--------------ECCTTT----CCTTSHHHHHHH
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHh-----cCCcc---ccccc--------------ccCcee----cccCCHHHHHHH
Confidence 366789999996 7788778777764 35300 00000 010000 011112357888
Q ss_pred hcccCCcEEEeccCCCCC-----------------CCHHHHHHHHcCCCCcEEEecC
Q 008629 375 VKVIKPTILIGSSGVGRT-----------------FTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 375 V~~vkPtvLIG~S~~~g~-----------------Ft~evv~~Ma~~~erPIIFaLS 414 (559)
++..++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 57 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS 113 (319)
T 4b8w_A 57 FEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLS 113 (319)
T ss_dssp HHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 888889999988776431 1235788887776667888544
No 284
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=61.74 E-value=5.3 Score=38.10 Aligned_cols=90 Identities=11% Similarity=0.161 Sum_probs=52.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 379 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 379 (559)
.||.|+|+|..|..++..+.. .| .+++++|++ . +.+....+.+ ......++.|+++ +
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~-----~g-------~~v~~~~~~----~---~~~~~~~~~~--g~~~~~~~~~~~~--~ 60 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQ-----TP-------HELIISGSS----L---ERSKEIAEQL--ALPYAMSHQDLID--Q 60 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-----SS-------CEEEEECSS----H---HHHHHHHHHH--TCCBCSSHHHHHH--T
T ss_pred cEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEECCC----H---HHHHHHHHHc--CCEeeCCHHHHHh--c
Confidence 489999999999999887753 24 367778763 1 1122221111 1112356888887 4
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 008629 380 PTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 417 (559)
Q Consensus 380 PtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 417 (559)
+|++|=+.. + ...+++++.+. +..+|.-+++-.
T Consensus 61 ~D~Vi~~v~-~-~~~~~v~~~l~---~~~~vv~~~~~~ 93 (259)
T 2ahr_A 61 VDLVILGIK-P-QLFETVLKPLH---FKQPIISMAAGI 93 (259)
T ss_dssp CSEEEECSC-G-GGHHHHHTTSC---CCSCEEECCTTC
T ss_pred CCEEEEEeC-c-HhHHHHHHHhc---cCCEEEEeCCCC
Confidence 888774333 3 34567776654 334666565533
No 285
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=61.73 E-value=6.6 Score=40.87 Aligned_cols=34 Identities=18% Similarity=0.268 Sum_probs=26.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
||||+|+|.||+..|..+.+. |. .-+|.++|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~-----~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DK-----ESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CS-----SSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CC-----CCcEEEEeCCC
Confidence 799999999999999888653 53 13688998754
No 286
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=61.58 E-value=5.1 Score=38.52 Aligned_cols=34 Identities=26% Similarity=0.370 Sum_probs=26.7
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
...+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAAR-----ANL-------QPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEccC
Confidence 45689999999999999988864 353 57788854
No 287
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=61.54 E-value=21 Score=36.16 Aligned_cols=56 Identities=25% Similarity=0.299 Sum_probs=35.2
Q ss_pred CcchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 275 IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 275 iQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
.++.....++..+.+++..+.+ ..++|+|.|||..|...+.+... .|. ++++.+|+
T Consensus 160 ~~aal~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 215 (370)
T 4ej6_A 160 VHGAFCEPLACCLHGVDLSGIK-AGSTVAILGGGVIGLLTVQLARL-----AGA------TTVILSTR 215 (370)
T ss_dssp TGGGGHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred HHHhhhhHHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 3444444556666677665544 46899999998777655544432 364 46777765
No 288
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=61.54 E-value=7.1 Score=39.98 Aligned_cols=37 Identities=16% Similarity=0.281 Sum_probs=29.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCcc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 346 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi 346 (559)
.+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~-----~g~~-----~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA-----EGFE-----GRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC-----SEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHc-----cCcC-----CeEEEEECCCCC
Confidence 489999999999999998875 3642 469999886443
No 289
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=61.40 E-value=6.8 Score=38.84 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=28.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
+..|+|+|||.+|+.+|-.|.+ .|. ++.++|+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~-----~G~-------~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAK-----RGE-------EVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 4679999999999999998875 364 599999874
No 290
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=61.33 E-value=7.3 Score=37.33 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=26.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.+|+|+|+|.||+..|..+.+ .|. .++.++|+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-----GGV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-----CCC------CcEEEEcCC
Confidence 379999999999999988865 364 278999985
No 291
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=61.12 E-value=7.8 Score=40.87 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=28.1
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
...+|+|+|+|.||+..|..|... |. ++.++|+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~ 154 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRY 154 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecc
Confidence 357899999999999999998763 63 58899875
No 292
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=61.06 E-value=3.9 Score=41.46 Aligned_cols=97 Identities=15% Similarity=0.119 Sum_probs=52.4
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHh
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 375 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V 375 (559)
.....||.|+|+|..|...++.+.. +..|. +-+.++|++ .+ ......+.|--......++.|++
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~---~~~~~------~lvav~d~~----~~---~~~~~a~~~g~~~~~~~~~~~ll 83 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLAN---TVSGV------EVVAVCDIV----AG---RAQAALDKYAIEAKDYNDYHDLI 83 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHH---TCTTE------EEEEEECSS----TT---HHHHHHHHHTCCCEEESSHHHHH
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHh---hCCCc------EEEEEEeCC----HH---HHHHHHHHhCCCCeeeCCHHHHh
Confidence 3445799999999988766555432 11121 224466653 11 12223333311112236899999
Q ss_pred cccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 008629 376 KVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 411 (559)
Q Consensus 376 ~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 411 (559)
+.-++|+++ +++.. .+..++++...+.. ++|+.
T Consensus 84 ~~~~~D~V~-i~tp~-~~h~~~~~~al~aG-k~Vl~ 116 (357)
T 3ec7_A 84 NDKDVEVVI-ITASN-EAHADVAVAALNAN-KYVFC 116 (357)
T ss_dssp HCTTCCEEE-ECSCG-GGHHHHHHHHHHTT-CEEEE
T ss_pred cCCCCCEEE-EcCCc-HHHHHHHHHHHHCC-CCEEe
Confidence 987899988 55544 45556555544332 55554
No 293
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=61.03 E-value=7.3 Score=38.54 Aligned_cols=35 Identities=26% Similarity=0.284 Sum_probs=28.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCcc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 346 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi 346 (559)
-.|+|+|||.+|+.+|-.|.+ .|. ++.++|+....
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~-----~G~-------~V~vie~~~~~ 38 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAK-----QGV-------KTLLVDAFDPP 38 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCCCC
Confidence 579999999999999998875 363 68999987543
No 294
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=60.89 E-value=8.5 Score=38.29 Aligned_cols=36 Identities=14% Similarity=0.257 Sum_probs=28.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
+..|+|+|||.+|+.+|-.|.+. .|. .++.++|+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~----~G~------~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKN----HGI------TNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HCC------CCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHh----cCC------CcEEEEeCCC
Confidence 56899999999999999988761 151 3689999875
No 295
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=60.86 E-value=14 Score=36.87 Aligned_cols=31 Identities=29% Similarity=0.502 Sum_probs=24.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
+||-|+|-|..|.++|.-|++. |. +++.+|+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-----G~-------~V~v~dr 36 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-----GY-------ELVVWNR 36 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEC--
T ss_pred CcEEEEecHHHHHHHHHHHHHC-----CC-------eEEEEeC
Confidence 5899999999999999999763 64 5777776
No 296
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=60.72 E-value=8.6 Score=33.66 Aligned_cols=34 Identities=6% Similarity=0.154 Sum_probs=27.4
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
...+|+|+|+|..|..+++.|.. .| .++.++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~-----~g-------~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQ-----RG-------QNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 45689999999999999998865 25 368888875
No 297
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=60.54 E-value=7.9 Score=41.82 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=29.0
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999999865 364 589999864
No 298
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=60.45 E-value=8.9 Score=36.56 Aligned_cols=86 Identities=10% Similarity=0.231 Sum_probs=53.4
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 008629 301 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 379 (559)
Q Consensus 301 riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 379 (559)
||+|.|| |-.|-.+++.|+ . | .+++.+|+..-.. .-+..+..++.++++..+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~~~--------------~~D~~d~~~~~~~~~~~~ 54 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSKEF--------------CGDFSNPKGVAETVRKLR 54 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCSSS--------------CCCTTCHHHHHHHHHHHC
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEeccccccc--------------cccCCCHHHHHHHHHhcC
Confidence 7899997 777777776664 2 4 3678777653110 001111135777888778
Q ss_pred CcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 008629 380 PTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 380 PtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 414 (559)
+|++|=+.+.... -+..+++++.+..- .+||.=|
T Consensus 55 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 104 (299)
T 1n2s_A 55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYST 104 (299)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEE
T ss_pred CCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEec
Confidence 9999988875431 14567777765544 5888544
No 299
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=60.34 E-value=8.8 Score=38.35 Aligned_cols=48 Identities=17% Similarity=0.101 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 282 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 282 ~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
.++..+.|++..+. ..++|+|.|||..|..++.++.. .|. ++++.+|+
T Consensus 153 ~~~ta~~~l~~~~~--~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~ 200 (348)
T 2d8a_A 153 PLGNAVDTVLAGPI--SGKSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEP 200 (348)
T ss_dssp HHHHHHHHHTTSCC--TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECS
T ss_pred HHHHHHHHHHhcCC--CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 34444556644333 88999999999888777665543 364 46887775
No 300
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=60.11 E-value=7.7 Score=39.21 Aligned_cols=32 Identities=19% Similarity=0.271 Sum_probs=26.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
+|+|+|||.||+..|..|.+. |. ++.++++..
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~-----G~-------~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA-----GK-------KVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHc-----CC-------eEEEEecCC
Confidence 699999999999999988763 63 677887743
No 301
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=60.09 E-value=6.6 Score=38.01 Aligned_cols=33 Identities=24% Similarity=0.287 Sum_probs=27.1
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
...+|+|+|||.||+..|..|.. .|+ ++.++|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAAR-----AEL-------KPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEec
Confidence 45689999999999999998865 264 5888987
No 302
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=60.06 E-value=5.7 Score=36.98 Aligned_cols=95 Identities=14% Similarity=0.153 Sum_probs=50.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchh-chhhcc-ccCCCCCHHHH-hcc
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-KKPWAH-EHEPVNNLLDA-VKV 377 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~-k~~fA~-~~~~~~~L~e~-V~~ 377 (559)
||+|+|+|..|..+|+.|... | .++.++|++ .++-+.+... ...+.. +......|.++ ++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-----g-------~~v~vid~~----~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~- 64 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-----K-------YGVVIINKD----RELCEEFAKKLKATIIHGDGSHKEILRDAEVS- 64 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-----T-------CCEEEEESC----HHHHHHHHHHSSSEEEESCTTSHHHHHHHTCC-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC----HHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcc-
Confidence 799999999999999988752 5 368888874 1110111110 001111 11111235554 44
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHc-CCCCcEEEecCC
Q 008629 378 IKPTILIGSSGVGRTFTKEVIEAMAS-FNEKPLILALSN 415 (559)
Q Consensus 378 vkPtvLIG~S~~~g~Ft~evv~~Ma~-~~erPIIFaLSN 415 (559)
+++++|-+.... . .-..+..+++ .+..+-|++..|
T Consensus 65 -~ad~vi~~~~~d-~-~n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 65 -KNDVVVILTPRD-E-VNLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp -TTCEEEECCSCH-H-HHHHHHHHHHHTSCCCEEEECCC
T ss_pred -cCCEEEEecCCc-H-HHHHHHHHHHHHcCCCeEEEEEe
Confidence 589998665532 2 2233334443 355555666555
No 303
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=59.84 E-value=6.9 Score=46.10 Aligned_cols=38 Identities=24% Similarity=0.351 Sum_probs=34.0
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 295 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 295 ~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
++|+..||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 23 ~rL~~s~VlIvG~GGlGseiak~La~a-----GV------g~itlvD~D 60 (1015)
T 3cmm_A 23 LKMQTSNVLILGLKGLGVEIAKNVVLA-----GV------KSMTVFDPE 60 (1015)
T ss_dssp HHHTTCEEEEECCSHHHHHHHHHHHHH-----CC------SEEEEECCS
T ss_pred HHHhcCEEEEECCChHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 357899999999999999999999876 87 799999987
No 304
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=59.78 E-value=28 Score=33.40 Aligned_cols=79 Identities=15% Similarity=0.204 Sum_probs=43.4
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHH
Q 008629 294 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 373 (559)
Q Consensus 294 g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e 373 (559)
..+++++++||-||++ ||...|+..+.+ .|. +++++|++.- .+......+.-|..+..++.+
T Consensus 9 ~~~~~~k~vlVTGas~---GIG~aia~~l~~-~G~-------~V~~~~r~~~-------~~~~~~~~~~~Dv~~~~~v~~ 70 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSS---GIGLAVVDALVR-YGA-------KVVSVSLDEK-------SDVNVSDHFKIDVTNEEEVKE 70 (269)
T ss_dssp -CTTTTCEEEESSTTS---HHHHHHHHHHHH-TTC-------EEEEEESCC---------CTTSSEEEECCTTCHHHHHH
T ss_pred ccCCCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCCch-------hccCceeEEEecCCCHHHHHH
Confidence 4578899999999754 444445555544 363 5888876421 111111112112222234555
Q ss_pred Hhccc-----CCcEEEeccCCC
Q 008629 374 AVKVI-----KPTILIGSSGVG 390 (559)
Q Consensus 374 ~V~~v-----kPtvLIG~S~~~ 390 (559)
+++.+ ++|+||=..+..
T Consensus 71 ~~~~~~~~~g~iD~lv~nAg~~ 92 (269)
T 3vtz_A 71 AVEKTTKKYGRIDILVNNAGIE 92 (269)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCcC
Confidence 66555 799999777653
No 305
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=59.68 E-value=7.3 Score=40.54 Aligned_cols=37 Identities=14% Similarity=0.172 Sum_probs=27.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 345 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 345 (559)
..+|||+|||.||+..|..|.+. ..| .+|.++|+..-
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~---~~g-------~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRL---DPE-------AHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHH---CTT-------SEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhh---CcC-------CCEEEEECCCc
Confidence 46899999999999999988763 013 47888988654
No 306
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=59.52 E-value=8.6 Score=38.43 Aligned_cols=33 Identities=15% Similarity=0.337 Sum_probs=26.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
.+|+|+|||.||+..|-.|... |+ ++.++|+..
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 4799999999999999888763 64 577887654
No 307
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=59.34 E-value=14 Score=34.37 Aligned_cols=101 Identities=20% Similarity=0.153 Sum_probs=54.6
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc-ccCCCCCHHHH
Q 008629 297 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 374 (559)
Q Consensus 297 l~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~e~ 374 (559)
..-.+|+|.|| |-.|..+++.|++ .|- -++.+++++. ++...+......+.. |..+..++.++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~-----~G~------~~V~~~~R~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 85 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLAD-----KQT------IKQTLFARQP----AKIHKPYPTNSQIIMGDVLNHAALKQA 85 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTT-----CTT------EEEEEEESSG----GGSCSSCCTTEEEEECCTTCHHHHHHH
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHh-----CCC------ceEEEEEcCh----hhhcccccCCcEEEEecCCCHHHHHHH
Confidence 33468999995 6677777666653 241 3677777642 111111111111111 22222457788
Q ss_pred hcccCCcEEEeccCCCCC--CCHHHHHHHHcCCCCcEEEecC
Q 008629 375 VKVIKPTILIGSSGVGRT--FTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 375 V~~vkPtvLIG~S~~~g~--Ft~evv~~Ma~~~erPIIFaLS 414 (559)
++. .|++|=+.+.... -++.+++.|.+..-+-|||.=|
T Consensus 86 ~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 86 MQG--QDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp HTT--CSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hcC--CCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 875 7999966554322 2566788887655555666443
No 308
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=59.01 E-value=9.5 Score=39.06 Aligned_cols=38 Identities=18% Similarity=0.188 Sum_probs=30.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCcc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 346 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi 346 (559)
..+|||+|||.||+..|..|.+. |. ..++.++|+..-+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~lie~~~~~ 44 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQA-----GY-----QGLITVVGDEAER 44 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH-----TC-----CSCEEEEESSCSC
T ss_pred CCcEEEECChHHHHHHHHHHHcc-----CC-----CCeEEEEECCCCC
Confidence 46799999999999999988763 54 1369999987543
No 309
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=58.76 E-value=7.9 Score=40.61 Aligned_cols=38 Identities=18% Similarity=0.324 Sum_probs=27.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.+|+|+|||.||+..|..+.+.. ..|++. .++.++|+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~--~~G~~~----~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQ--EKGAEI----PELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH--HTTCCC----CEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhh--hcCCCC----CcEEEEEcC
Confidence 48999999999999999987632 136420 138888876
No 310
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=58.73 E-value=8.4 Score=40.03 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+.+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVE-----QG-------AQVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 4689999999999999987765 25 379999986
No 311
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=58.72 E-value=17 Score=35.07 Aligned_cols=99 Identities=13% Similarity=0.170 Sum_probs=56.3
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc-ccCCCCCHHHHhcc
Q 008629 300 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 377 (559)
Q Consensus 300 ~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~ 377 (559)
.+|+|.|| |-.|..+++.|++ .| .+++.+|+.. ....+.+.. ...+.. +..+..++.++++.
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~ 65 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVD-----EG-------LSVVVVDNLQ---TGHEDAITE-GAKFYNGDLRDKAFLRDVFTQ 65 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCT-TSEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCC---cCchhhcCC-CcEEEECCCCCHHHHHHHHhh
Confidence 37899986 7777777777654 25 3577777631 110011211 111111 11222357777775
Q ss_pred cCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 008629 378 IKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 378 vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 414 (559)
.++|++|=+.+.... -+..+++++.+..-+.+||.=|
T Consensus 66 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 66 ENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp SCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 579999988775421 1345677777665567888544
No 312
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=58.72 E-value=14 Score=35.56 Aligned_cols=87 Identities=13% Similarity=0.137 Sum_probs=54.3
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcc
Q 008629 299 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 377 (559)
Q Consensus 299 d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 377 (559)
..||+|.|| |-.|-.+++.|++ .|. +++++++. ...| +. +..++.++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~D-~~-----------d~~~~~~~~~~ 53 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DELN-LL-----------DSRAVHDFFAS 53 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTCC-TT-----------CHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccCC-cc-----------CHHHHHHHHHh
Confidence 468999996 7777777776653 252 46656542 1111 21 11347777776
Q ss_pred cCCcEEEeccCCCCC-----------------CCHHHHHHHHcCCCCcEEEecC
Q 008629 378 IKPTILIGSSGVGRT-----------------FTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 378 vkPtvLIG~S~~~g~-----------------Ft~evv~~Ma~~~erPIIFaLS 414 (559)
+++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 54 ~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 54 ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 679999988876531 1345677777666567888654
No 313
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=58.48 E-value=28 Score=37.02 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=26.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
..||.|+|+|.-|+.+|..+.+. | .+++++|.+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-----G-------~~V~~~D~~ 40 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-----G-------HEVVCVDKD 40 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-----C-------CEEEEEeCC
Confidence 46999999999999999998763 5 357778764
No 314
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=58.27 E-value=13 Score=35.83 Aligned_cols=79 Identities=14% Similarity=0.162 Sum_probs=43.3
Q ss_pred CcccceEEEeCcC-h--HHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhc------cccC
Q 008629 296 TLAEHRFLFLGAG-E--AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA------HEHE 366 (559)
Q Consensus 296 ~l~d~riv~~GAG-s--AgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA------~~~~ 366 (559)
.+++.++||.||. . .|..+|+.+++ .|. +++++|+.-+ . +.+...+..+. -|..
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G~-------~V~~~~r~~~--~---~~~~~l~~~~~~~~~~~~Dl~ 85 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHR-----EGA-------ELAFTYVGQF--K---DRVEKLCAEFNPAAVLPCDVI 85 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHH-----TTC-------EEEEEECTTC--H---HHHHHHHGGGCCSEEEECCTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHH-----cCC-------EEEEeeCchH--H---HHHHHHHHhcCCceEEEeecC
Confidence 4677899999974 3 45555655543 363 5888887641 0 11222111111 1111
Q ss_pred CCCCHHHHhccc-----CCcEEEeccCCCC
Q 008629 367 PVNNLLDAVKVI-----KPTILIGSSGVGR 391 (559)
Q Consensus 367 ~~~~L~e~V~~v-----kPtvLIG~S~~~g 391 (559)
+..++.++++.+ ++|+||=..+...
T Consensus 86 ~~~~v~~~~~~~~~~~g~id~li~nAg~~~ 115 (280)
T 3nrc_A 86 SDQEIKDLFVELGKVWDGLDAIVHSIAFAP 115 (280)
T ss_dssp CHHHHHHHHHHHHHHCSSCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccCC
Confidence 223455555554 7899998877653
No 315
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=58.13 E-value=7.6 Score=38.23 Aligned_cols=35 Identities=11% Similarity=0.235 Sum_probs=28.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCcc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 346 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi 346 (559)
-.|+|+|||.+|+.+|-.|.+ .|+ ++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~-----~G~-------~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATR-----AGL-------NVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHH-----TTC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCCCC
Confidence 479999999999999988875 364 68999987543
No 316
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=57.79 E-value=8.7 Score=39.08 Aligned_cols=37 Identities=24% Similarity=0.311 Sum_probs=29.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCcc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 346 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi 346 (559)
+..|||+|||.+|+..|-.|.+ .|. +++.++|+....
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~-----~G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLAR-----RGY------TNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----cCC------CcEEEEeCCCCC
Confidence 4579999999999999988865 364 378999987553
No 317
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=57.68 E-value=9.1 Score=38.28 Aligned_cols=35 Identities=14% Similarity=0.285 Sum_probs=28.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCcc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 346 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi 346 (559)
..|||+|||.+|+.+|-.|.+ .|. ++.++|+....
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~-----~G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAE-----RGH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCCCC
Confidence 579999999999999988875 364 58899987554
No 318
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=57.40 E-value=10 Score=37.47 Aligned_cols=34 Identities=21% Similarity=0.323 Sum_probs=27.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
+..|+|+|||.+|+.+|-.|.+ .|. ++.++|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~-----~G~-------~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILAR-----KGY-------SVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeccC
Confidence 4589999999999999988854 363 689999764
No 319
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=57.38 E-value=8.4 Score=41.64 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=28.8
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 35689999999999999998865 364 689999864
No 320
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=57.23 E-value=22 Score=32.05 Aligned_cols=50 Identities=16% Similarity=0.189 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 282 VLAGVVAALKLIGGTLAEHRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 282 ~LAgll~Alr~~g~~l~d~riv~~G-AGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.++..+.+++....--..++++|.| +|..|..+++++... |. +++.+|++
T Consensus 22 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-----G~-------~V~~~~~~ 72 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMI-----GA-------RIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-----TC-------EEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHc-----CC-------EEEEEeCC
Confidence 3344445554333334568999999 487787777766542 52 57777753
No 321
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=57.20 E-value=12 Score=40.99 Aligned_cols=37 Identities=11% Similarity=0.286 Sum_probs=30.0
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCc
Q 008629 297 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 345 (559)
Q Consensus 297 l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 345 (559)
+++.+|||+|||.||+..|-.|.. .|+ ++.++|+...
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar-----~G~-------~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHK-----LGH-------DVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHc-----CCC-------CEEEEcCCCC
Confidence 557899999999999999987765 364 6899998843
No 322
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=57.16 E-value=7.1 Score=40.14 Aligned_cols=39 Identities=15% Similarity=0.261 Sum_probs=28.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhc-ccEEEEcccCc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETR-KKICLVDSKGL 345 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~-~~i~lvD~~GL 345 (559)
..+|||+|||.||+..|..|.+. |. +.. -++.++|+..-
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~-----g~---~~~~~~v~liE~~~~ 69 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQER-----AQ---AQGALEVLFLDKQGD 69 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHH-----HH---HHCCCCEEEEESCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhc-----cc---ccCcccEEEEecCCC
Confidence 34799999999999999998764 31 000 36889988753
No 323
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=57.08 E-value=8.7 Score=39.66 Aligned_cols=36 Identities=22% Similarity=0.379 Sum_probs=28.4
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
...+|+|+|||.||+..|..|.+ .|.. .++.++|+.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~ 40 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERR 40 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecC
Confidence 35689999999999999988865 3641 268889876
No 324
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=56.98 E-value=24 Score=35.05 Aligned_cols=86 Identities=19% Similarity=0.076 Sum_probs=54.4
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcc
Q 008629 299 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 377 (559)
Q Consensus 299 d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 377 (559)
..||+++|+ |..|--+++.+.+. |. +-++.+|.+.- +. + . + ..+-..++.|+.+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~-----g~------~~V~~V~p~~~---g~-~-~------~--G~~vy~sl~el~~~ 62 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAY-----GT------KMVGGVTPGKG---GT-T-H------L--GLPVFNTVREAVAA 62 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-----TC------EEEEEECTTCT---TC-E-E------T--TEEEESSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-----CC------eEEEEeCCCcc---cc-e-e------C--CeeccCCHHHHhhc
Confidence 469999999 99887776665442 53 35677776411 00 1 0 0 01113579998875
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEE
Q 008629 378 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLI 410 (559)
Q Consensus 378 vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPII 410 (559)
.+||+.|=+ +.+ .+..+++++..+..-+.+|
T Consensus 63 ~~~D~viI~-tP~-~~~~~~~~ea~~~Gi~~iV 93 (288)
T 2nu8_A 63 TGATASVIY-VPA-PFCKDSILEAIDAGIKLII 93 (288)
T ss_dssp HCCCEEEEC-CCG-GGHHHHHHHHHHTTCSEEE
T ss_pred CCCCEEEEe-cCH-HHHHHHHHHHHHCCCCEEE
Confidence 569988843 333 5889999988877666533
No 325
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=56.86 E-value=10 Score=39.23 Aligned_cols=33 Identities=21% Similarity=0.255 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+.+|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-----g~-------~V~liE~~ 38 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-----GF-------KTTCIEKR 38 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEEECS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 45799999999999999887653 53 68999986
No 326
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=56.68 E-value=37 Score=33.90 Aligned_cols=98 Identities=17% Similarity=0.124 Sum_probs=56.5
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc-ccCCCCCHHHHhc
Q 008629 299 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVK 376 (559)
Q Consensus 299 d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~ 376 (559)
..+|+|.|| |-.|..+++.|++ .| .+++.+|++- .....+......+.. +..+..++.++++
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~ 92 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKH-----EG-------HYVIASDWKK----NEHMTEDMFCDEFHLVDLRVMENCLKVTE 92 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----CSSSCGGGTCSEEEECCTTSHHHHHHHHT
T ss_pred CCeEEEECCccHHHHHHHHHHHH-----CC-------CeEEEEECCC----ccchhhccCCceEEECCCCCHHHHHHHhC
Confidence 468999998 7777777777764 25 3688887741 111111111111211 2122235777776
Q ss_pred ccCCcEEEeccCCCCC--C---------------CHHHHHHHHcCCCCcEEEecC
Q 008629 377 VIKPTILIGSSGVGRT--F---------------TKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 377 ~vkPtvLIG~S~~~g~--F---------------t~evv~~Ma~~~erPIIFaLS 414 (559)
++|++|=+.+.... + +..+++++.+..-+.|||.=|
T Consensus 93 --~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 93 --GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp --TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred --CCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 59999988875432 1 235667776665567888544
No 327
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=56.50 E-value=8.4 Score=37.45 Aligned_cols=36 Identities=22% Similarity=0.246 Sum_probs=29.7
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+|++.++||+|+|..|..-++.|+.+ | .++.++|.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECCC
Confidence 57889999999999999999888764 5 368888864
No 328
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=56.38 E-value=8.4 Score=40.20 Aligned_cols=35 Identities=20% Similarity=0.220 Sum_probs=28.4
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
++.+|||+|+|.||+..|..+.+ .| .++.++|+.-
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~-----~g-------~~V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQ-----LG-------LKVLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 35789999999999999998865 25 3699999863
No 329
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=56.32 E-value=26 Score=33.95 Aligned_cols=97 Identities=13% Similarity=0.097 Sum_probs=57.9
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchh----------hcc-ccC
Q 008629 299 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP----------WAH-EHE 366 (559)
Q Consensus 299 d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~----------fA~-~~~ 366 (559)
..+|+|.|| |-.|..+++.|++ .| -+++++|+.. . ........ +.. +..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~~~~~Dl~ 65 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLA-----HG-------YDVVIADNLV----N---SKREAIARIEKITGKTPAFHETDVS 65 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS----S---SCTHHHHHHHHHHSCCCEEECCCTT
T ss_pred CcEEEEecCCcHHHHHHHHHHHH-----CC-------CcEEEEecCC----c---chHHHHHHHHhhcCCCceEEEeecC
Confidence 468999996 6666666666654 36 3588887641 1 11111111 111 111
Q ss_pred CCCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 008629 367 PVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 367 ~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 414 (559)
+..++.++++..++|++|=+.+.... -+..+++.|.+..-+.|||.=|
T Consensus 66 d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 66 DERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp CHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 22357778887789999988775421 1446788888777678998644
No 330
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=56.30 E-value=10 Score=39.10 Aligned_cols=36 Identities=19% Similarity=0.373 Sum_probs=27.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
.+|||+|||.||+..|..|...+. .| -+|.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~--~g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG--SG-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG--GG-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCC--Cc-------CEEEEEeCCC
Confidence 589999999999999999877431 13 3677887754
No 331
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=56.26 E-value=18 Score=36.19 Aligned_cols=103 Identities=15% Similarity=0.170 Sum_probs=57.7
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCc-hhchhhcc-ccCCCCCHH
Q 008629 296 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAH-EHEPVNNLL 372 (559)
Q Consensus 296 ~l~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~-~~k~~fA~-~~~~~~~L~ 372 (559)
+++..+|+|.|| |-.|..+++.|++ .|. .+++.+|+.. ....+.+. ..+..+.. +..+..++.
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~-----~g~------~~V~~~~r~~---~~~~~~l~~~~~v~~~~~Dl~d~~~l~ 94 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLE-----LGV------NQVHVVDNLL---SAEKINVPDHPAVRFSETSITDDALLA 94 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHH-----TTC------SEEEEECCCT---TCCGGGSCCCTTEEEECSCTTCHHHHH
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHH-----cCC------ceEEEEECCC---CCchhhccCCCceEEEECCCCCHHHHH
Confidence 356678999997 7777777777764 251 3688887641 11001121 01111111 111112466
Q ss_pred HHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcC-CCCcEEEecC
Q 008629 373 DAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASF-NEKPLILALS 414 (559)
Q Consensus 373 e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~-~erPIIFaLS 414 (559)
++++ ++|++|=+.+.... -+..+++++.+. .-+.+||.=|
T Consensus 95 ~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 95 SLQD--EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp HCCS--CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred HHhh--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 6666 69999988875431 145567777665 4567887544
No 332
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=56.22 E-value=18 Score=36.27 Aligned_cols=49 Identities=24% Similarity=0.221 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 282 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 282 ~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
.++..+.|++..+.+ ..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 156 ~~~ta~~al~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 156 PLSVGIHACRRGGVT-LGHKVLVCGAGPIGMVTLLVAKA-----MGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred hHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 344445566554433 46799999999777666554432 364 46888875
No 333
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=55.84 E-value=24 Score=33.27 Aligned_cols=78 Identities=13% Similarity=0.206 Sum_probs=42.6
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHH
Q 008629 294 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 373 (559)
Q Consensus 294 g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e 373 (559)
..++++.++||.||++ ||...++..+.+ .|. +++++|++- + .+.... .+.-|..+..++.+
T Consensus 10 ~~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G~-------~V~~~~r~~----~---~~~~~~-~~~~D~~~~~~~~~ 70 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNR---GIGLAIAQRLAA-DGH-------KVAVTHRGS----G---APKGLF-GVEVDVTDSDAVDR 70 (247)
T ss_dssp CCCCCCCEEEETTTTS---HHHHHHHHHHHH-TTC-------EEEEEESSS----C---CCTTSE-EEECCTTCHHHHHH
T ss_pred cccCCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCCh----H---HHHHhc-CeeccCCCHHHHHH
Confidence 3467888999999743 444455555544 363 588887741 1 122111 11112222234555
Q ss_pred Hhccc-----CCcEEEeccCCC
Q 008629 374 AVKVI-----KPTILIGSSGVG 390 (559)
Q Consensus 374 ~V~~v-----kPtvLIG~S~~~ 390 (559)
+++.+ ++|+||=..+..
T Consensus 71 ~~~~~~~~~g~id~lv~~Ag~~ 92 (247)
T 1uzm_A 71 AFTAVEEHQGPVEVLVSNAGLS 92 (247)
T ss_dssp HHHHHHHHHSSCSEEEEECSCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 55544 689999877654
No 334
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=55.82 E-value=10 Score=35.61 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=26.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+-+|+|+|+|.+|+..|..+.+ .|+ ++.++|+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~-----~g~-------~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQ-----KGV-------RVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 4579999999999999988865 363 68888875
No 335
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=55.73 E-value=14 Score=34.14 Aligned_cols=68 Identities=15% Similarity=0.205 Sum_probs=38.2
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhccc-
Q 008629 301 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI- 378 (559)
Q Consensus 301 riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v- 378 (559)
++||.|| |-.|..+++.|++ .| .+++++|++. + .+.. .+.-+.....++.++++.+
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~---~~~~---~~~~D~~~~~~~~~~~~~~~ 60 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLAR-----AG-------HTVIGIDRGQ----A---DIEA---DLSTPGGRETAVAAVLDRCG 60 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCh----h---Hccc---cccCCcccHHHHHHHHHHcC
Confidence 6899987 5555555555543 35 3588888741 1 1211 1111111113466666655
Q ss_pred -CCcEEEeccCCC
Q 008629 379 -KPTILIGSSGVG 390 (559)
Q Consensus 379 -kPtvLIG~S~~~ 390 (559)
++|+||=+.+..
T Consensus 61 ~~~d~vi~~Ag~~ 73 (255)
T 2dkn_A 61 GVLDGLVCCAGVG 73 (255)
T ss_dssp TCCSEEEECCCCC
T ss_pred CCccEEEECCCCC
Confidence 799999887754
No 336
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=55.66 E-value=23 Score=34.22 Aligned_cols=97 Identities=20% Similarity=0.145 Sum_probs=53.4
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc-ccCCCCCHHHHhcc
Q 008629 300 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 377 (559)
Q Consensus 300 ~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~ 377 (559)
.||+|.|| |-.|..+++.|++ .| .+++.+|++. ++.+.+...+..+.. +..+..++.++++
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~- 76 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRA-----AG-------HDLVLIHRPS----SQIQRLAYLEPECRVAEMLDHAGLERALR- 76 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEECTT----SCGGGGGGGCCEEEECCTTCHHHHHHHTT-
T ss_pred CEEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEecCh----HhhhhhccCCeEEEEecCCCHHHHHHHHc-
Confidence 38999996 8788778777765 25 3688887741 111112211111211 1122235777777
Q ss_pred cCCcEEEeccCCCCCC--------------CHHHHHHHHcCCCCcEEEecC
Q 008629 378 IKPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 378 vkPtvLIG~S~~~g~F--------------t~evv~~Ma~~~erPIIFaLS 414 (559)
++|++|=+.+..+.. +..+++++.+..-+.+||.=|
T Consensus 77 -~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 77 -GLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp -TCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred -CCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 499999887754311 346777777665567888544
No 337
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=55.62 E-value=9.4 Score=40.48 Aligned_cols=32 Identities=19% Similarity=0.175 Sum_probs=26.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G-------~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----G-------ANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----C-------CEEEEEECC
Confidence 4899999999999999988763 5 357788864
No 338
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=55.59 E-value=9.7 Score=39.75 Aligned_cols=33 Identities=30% Similarity=0.549 Sum_probs=27.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAA-----FG-------KRVALIESK 36 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CcEEEEcCC
Confidence 4689999999999999998865 25 369999986
No 339
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=55.43 E-value=10 Score=38.96 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=27.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
.+|||+|||.||+..|..|... . .| .++.++|+.-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~--~-~g-------~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL--M-PD-------LKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH--C-TT-------CEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcC--C-CC-------CeEEEECCCC
Confidence 5899999999999999988762 1 13 3688888754
No 340
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=55.15 E-value=14 Score=39.68 Aligned_cols=36 Identities=28% Similarity=0.400 Sum_probs=20.8
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
++++.+++|.|||.+|.++|..+.+ .|. +++++|+.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~-----~G~-------~V~i~~R~ 396 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKE-----KGA-------KVVIANRT 396 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHH-----HCC--------CEEEESS
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 5778899999998666566555543 263 57887764
No 341
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=55.08 E-value=9.5 Score=39.95 Aligned_cols=34 Identities=21% Similarity=0.317 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
+-+|+|+|||.||+..|..+.+ .|. ++.++|++.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~-----~G~-------~V~liEk~~ 58 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQ-----LGM-------KVAVVEKRS 58 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCC
Confidence 4679999999999999988865 363 689999754
No 342
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=55.07 E-value=38 Score=34.84 Aligned_cols=131 Identities=6% Similarity=-0.004 Sum_probs=84.1
Q ss_pred HHHhhCCCeeeeeccCCCCcHHHHHHHHcCCCCeee--cCCcchhHHHHHHHHHHHHHhC------CCcccceEEEeCcC
Q 008629 237 VKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIG------GTLAEHRFLFLGAG 308 (559)
Q Consensus 237 v~~~fGp~~lIq~EDf~~~~Af~lL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Alr~~g------~~l~d~riv~~GAG 308 (559)
+-.+| .++++ +-.++ +.+.+.|.+|- ++||.| || .-=-.=+||=++.-.+..| ++++..||.++|-+
T Consensus 96 vls~~-~D~iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~va~vGD~ 170 (328)
T 3grf_A 96 VFSRM-VDICT-ARLAT-KEMMREMAQHA-SVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKFAYCGDS 170 (328)
T ss_dssp HHTTT-CSEEE-EECSS-HHHHHHHHHHC-SSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCEEEESCC
T ss_pred HHHhh-CCEEE-EecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCCcEEEEeCCC
Confidence 34556 55543 44443 34555666664 689998 65 4444567777777777766 37999999999998
Q ss_pred hHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccc---c---CCCCCHHHHhcccCCcE
Q 008629 309 EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE---H---EPVNNLLDAVKVIKPTI 382 (559)
Q Consensus 309 sAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~---~---~~~~~L~e~V~~vkPtv 382 (559)
. + .+|+-++.++.+ .|+ +|.++-.+|+..+-. +.+.+.-+.+|.. . ....++.|+|+. .||
T Consensus 171 ~-~-~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~p~-~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~--aDv 237 (328)
T 3grf_A 171 M-N-NVTYDLMRGCAL-LGM-------ECHVCCPDHKDFKPI-KEVIDECEEIIAKHGTGGSIKIFHDCKKGCEG--VDV 237 (328)
T ss_dssp S-S-HHHHHHHHHHHH-HTC-------EEEEECCSSGGGSCC-HHHHHHHHHHHHHHTCCCEEEEESSHHHHHTT--CSE
T ss_pred C-c-chHHHHHHHHHH-cCC-------EEEEECChHhhhCCC-HHHHHHHHHHHhhccCCCeEEEEcCHHHHhcC--CCE
Confidence 5 3 588888887776 475 689998988863111 1122222233322 1 123689999996 999
Q ss_pred EEe
Q 008629 383 LIG 385 (559)
Q Consensus 383 LIG 385 (559)
+.-
T Consensus 238 vyt 240 (328)
T 3grf_A 238 VYT 240 (328)
T ss_dssp EEE
T ss_pred EEe
Confidence 974
No 343
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=54.96 E-value=25 Score=35.49 Aligned_cols=49 Identities=16% Similarity=0.198 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 282 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 282 ~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
+....+.+++..+.....++|+|.|||..|..++.++.. .|. +++.+|+
T Consensus 171 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~-----~Ga-------~Vi~~~~ 219 (366)
T 1yqd_A 171 AGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKA-----FGS-------KVTVIST 219 (366)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred hHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 333445667666655478999999999887777665543 362 5777765
No 344
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=54.80 E-value=11 Score=35.94 Aligned_cols=98 Identities=15% Similarity=0.163 Sum_probs=57.0
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc-ccCCCCCHHHHhcc
Q 008629 300 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 377 (559)
Q Consensus 300 ~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~ 377 (559)
.+|+|.|| |-.|..+++.|++.- .| .+++.+|+.. .. ..+.+ +..+.. +..+..++.++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~---~g-------~~V~~~~r~~----~~-~~~~~-~~~~~~~D~~d~~~~~~~~~~ 66 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLY---GT-------ENVIASDIRK----LN-TDVVN-SGPFEVVNALDFNQIEHLVEV 66 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHH---CG-------GGEEEEESCC----CS-CHHHH-SSCEEECCTTCHHHHHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHhC---CC-------CEEEEEcCCC----cc-ccccC-CCceEEecCCCHHHHHHHHhh
Confidence 57999998 888888887776520 12 3688887641 11 00110 111111 21222357788887
Q ss_pred cCCcEEEeccCCCCC---------------CCHHHHHHHHcCCCCcEEEec
Q 008629 378 IKPTILIGSSGVGRT---------------FTKEVIEAMASFNEKPLILAL 413 (559)
Q Consensus 378 vkPtvLIG~S~~~g~---------------Ft~evv~~Ma~~~erPIIFaL 413 (559)
.++|++|=+.+.... -|..+++++.+..-+.+||.=
T Consensus 67 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S 117 (312)
T 2yy7_A 67 HKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPS 117 (312)
T ss_dssp TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCE
T ss_pred cCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEec
Confidence 789999988875421 134567777765556788743
No 345
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=54.70 E-value=40 Score=30.18 Aligned_cols=91 Identities=11% Similarity=0.162 Sum_probs=52.2
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchh--chhhcc-ccCCCCCHHHHhc
Q 008629 301 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF--KKPWAH-EHEPVNNLLDAVK 376 (559)
Q Consensus 301 riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~--k~~fA~-~~~~~~~L~e~V~ 376 (559)
||+|.|| |-.|-.+++.|++ .| .+++.++++. +.+... ...+.. +..+..+ ++++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~-------~~~~~~~~~~~~~~~D~~d~~~--~~~~ 60 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKN-----RG-------HEVTAIVRNA-------GKITQTHKDINILQKDIFDLTL--SDLS 60 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCS-------HHHHHHCSSSEEEECCGGGCCH--HHHT
T ss_pred eEEEEcCCchhHHHHHHHHHh-----CC-------CEEEEEEcCc-------hhhhhccCCCeEEeccccChhh--hhhc
Confidence 7999996 7778778777764 25 3678777641 111111 111111 1111112 6666
Q ss_pred ccCCcEEEeccCCCCCC-------CHHHHHHHHcCCCCcEEEecC
Q 008629 377 VIKPTILIGSSGVGRTF-------TKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 377 ~vkPtvLIG~S~~~g~F-------t~evv~~Ma~~~erPIIFaLS 414 (559)
. +|++|=+.+.+... ++.+++.|.+...+.+||.-|
T Consensus 61 ~--~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 61 D--QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp T--CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred C--CCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 4 89999887764221 367888887665566777544
No 346
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=54.55 E-value=11 Score=39.26 Aligned_cols=33 Identities=18% Similarity=0.202 Sum_probs=27.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+.+|||+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~ 34 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ-----LGM-------KTACVEKR 34 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCC
Confidence 3579999999999999987765 253 68999987
No 347
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=54.49 E-value=9.6 Score=39.92 Aligned_cols=35 Identities=29% Similarity=0.400 Sum_probs=28.6
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
.+.+|+|+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAAS-----YG-------AKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TS-------CCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 35689999999999999998875 25 3699999863
No 348
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=54.46 E-value=9.8 Score=36.40 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=24.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.+|+|+|||.||+..|..+.+ .|. ++.+++++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR-----KGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 479999999999999988764 353 57777653
No 349
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=54.37 E-value=9 Score=36.18 Aligned_cols=98 Identities=15% Similarity=0.089 Sum_probs=53.8
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc-ccCCCCCHHHHhccc
Q 008629 301 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 378 (559)
Q Consensus 301 riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~v 378 (559)
||+|.|| |-.|..+++.|++. ..| -+++.+|++. ++.+.+......+.. +..+..++.++++.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~- 65 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKT---VPA-------SQIVAIVRNP----AKAQALAAQGITVRQADYGDEAALTSALQG- 65 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTCHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred CEEEEcCCchHHHHHHHHHHhh---CCC-------ceEEEEEcCh----HhhhhhhcCCCeEEEcCCCCHHHHHHHHhC-
Confidence 5889997 77777777766531 003 3577777641 111101111111111 11222357778875
Q ss_pred CCcEEEeccCCCC----CCCHHHHHHHHcCCCCcEEEecC
Q 008629 379 KPTILIGSSGVGR----TFTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 379 kPtvLIG~S~~~g----~Ft~evv~~Ma~~~erPIIFaLS 414 (559)
+|++|=+++... ..+..++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 66 -VEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp -CSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -CCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 799998876421 23678889888766667887543
No 350
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=54.34 E-value=8.7 Score=37.54 Aligned_cols=34 Identities=18% Similarity=0.237 Sum_probs=27.0
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
...+|+|+|+|.||+..|..+.+ .|+ ++.++|+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAAR-----AQL-------APLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEecC
Confidence 45689999999999999998865 264 57788854
No 351
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=54.19 E-value=10 Score=36.52 Aligned_cols=32 Identities=22% Similarity=0.350 Sum_probs=24.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
=-|+|+|+|+||+..|..+.+ .|+ ++.++|+.
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~-----~g~-------~V~liE~~ 38 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASR-----ANL-------KTVMIERG 38 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 358999999999999877654 364 68888864
No 352
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=54.09 E-value=13 Score=39.20 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=26.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 341 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD 341 (559)
+.+|+|+|||.||+..|..+.+. .| .++.++|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATL----YG-------KRVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHh----cC-------CeEEEEe
Confidence 46899999999999999988761 15 3689999
No 353
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=54.09 E-value=9.9 Score=39.42 Aligned_cols=33 Identities=27% Similarity=0.269 Sum_probs=27.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ-----LGL-------STAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 4579999999999999987765 363 68999986
No 354
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=54.03 E-value=9.9 Score=39.60 Aligned_cols=35 Identities=20% Similarity=0.296 Sum_probs=27.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 345 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 345 (559)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~-----~G~-------~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGK-----RGR-------RVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 4589999999999999987765 364 6889998653
No 355
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=53.92 E-value=11 Score=35.58 Aligned_cols=80 Identities=19% Similarity=0.195 Sum_probs=43.2
Q ss_pred CCcccceEEEeCcC---hHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhc------ccc
Q 008629 295 GTLAEHRFLFLGAG---EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA------HEH 365 (559)
Q Consensus 295 ~~l~d~riv~~GAG---sAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA------~~~ 365 (559)
.++++.++||.||+ -.|.++|+.+++ .|. +++++|+..- ..+.+......+. -|.
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G~-------~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~Dv 73 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKR-----EGA-------ELAFTYVGDR----FKDRITEFAAEFGSELVFPCDV 73 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESSGG----GHHHHHHHHHHTTCCCEEECCT
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cCC-------CEEEEecchh----hHHHHHHHHHHcCCcEEEECCC
Confidence 56888999999984 345556665543 363 6888887521 0011211111111 011
Q ss_pred CCCCCHHHHhccc-----CCcEEEeccCCC
Q 008629 366 EPVNNLLDAVKVI-----KPTILIGSSGVG 390 (559)
Q Consensus 366 ~~~~~L~e~V~~v-----kPtvLIG~S~~~ 390 (559)
.+..++.++++.+ ++|+||=..+..
T Consensus 74 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 103 (271)
T 3ek2_A 74 ADDAQIDALFASLKTHWDSLDGLVHSIGFA 103 (271)
T ss_dssp TCHHHHHHHHHHHHHHCSCEEEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 1112455555554 789999777654
No 356
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=53.86 E-value=28 Score=31.68 Aligned_cols=94 Identities=16% Similarity=0.214 Sum_probs=51.4
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc-ccCC-CCCHHHHhcc
Q 008629 301 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEP-VNNLLDAVKV 377 (559)
Q Consensus 301 riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~-~~~L~e~V~~ 377 (559)
||+|.|| |-.|-.+++.|++ .| -++++++++. ++...+ .+..+.. |..+ ..++.++++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~----~~~~~~--~~~~~~~~D~~d~~~~~~~~~~- 62 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLST-----TD-------YQIYAGARKV----EQVPQY--NNVKAVHFDVDWTPEEMAKQLH- 62 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTT-----SS-------CEEEEEESSG----GGSCCC--TTEEEEECCTTSCHHHHHTTTT-
T ss_pred eEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCc----cchhhc--CCceEEEecccCCHHHHHHHHc-
Confidence 7899994 6666666665543 35 3688888752 111111 1111111 2222 235677777
Q ss_pred cCCcEEEeccCCCCC--------CCHHHHHHHHcCCCCcEEEecC
Q 008629 378 IKPTILIGSSGVGRT--------FTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 378 vkPtvLIG~S~~~g~--------Ft~evv~~Ma~~~erPIIFaLS 414 (559)
++|++|=+.+.... -+..++++|.+..-+.|||.=|
T Consensus 63 -~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 63 -GMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp -TCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred -CCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 49999988775421 1456777776555455666433
No 357
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=53.80 E-value=12 Score=40.02 Aligned_cols=35 Identities=20% Similarity=0.269 Sum_probs=28.6
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRE-----LGR-------SVHVIETAG 49 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45689999999999999988875 364 588998864
No 358
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=53.74 E-value=15 Score=37.93 Aligned_cols=36 Identities=17% Similarity=0.300 Sum_probs=27.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
..+|||+|||.||+..|..|.+. +- ..++.++|+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRL-----KP-----EWDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHh-----Cc-----CCCEEEEECCC
Confidence 46899999999999999988653 21 13688888764
No 359
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=53.72 E-value=15 Score=36.72 Aligned_cols=57 Identities=21% Similarity=0.138 Sum_probs=35.1
Q ss_pred CCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 274 DIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 274 DiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
+.++.....++..+.|++..+.+ ..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 156 ~~~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 212 (363)
T 3m6i_A 156 YENGAMLEPLSVALAGLQRAGVR-LGDPVLICGAGPIGLITMLCAKA-----AGA------CPLVITDI 212 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCC-TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEEES
T ss_pred HHHHHhhhHHHHHHHHHHHcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 33444333455556667655543 46799999998777666544432 374 56887775
No 360
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=53.63 E-value=20 Score=34.51 Aligned_cols=98 Identities=16% Similarity=0.294 Sum_probs=54.4
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc-ccCCCCCHHHHhccc
Q 008629 301 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 378 (559)
Q Consensus 301 riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~v 378 (559)
||+|.|| |-.|..+++.|++ .| .+++.+|+.- ....+.+.. ...+.. +..+..++.++++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~ 65 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLA-----RG-------LEVAVLDNLA---TGKRENVPK-GVPFFRVDLRDKEGVERAFREF 65 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEECCCS---SCCGGGSCT-TCCEECCCTTCHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHH-----CC-------CEEEEEECCC---cCchhhccc-CeEEEECCCCCHHHHHHHHHhc
Confidence 6899987 6666667666653 35 3577777621 111011111 111111 111123577778766
Q ss_pred CCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 008629 379 KPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 379 kPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 414 (559)
++|++|=+.+..+. -+..+++++.+..-+.|||.=|
T Consensus 66 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 117 (311)
T 2p5y_A 66 RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFAST 117 (311)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 79999988875431 0345677776665567888644
No 361
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=53.49 E-value=12 Score=37.74 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=26.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCc
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 345 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 345 (559)
+|+|+|||.+|+..|-.|.+ .| .++.++++..-
T Consensus 2 dVvVIGaGiaGLsaA~~La~-----~G-------~~V~vlE~~~~ 34 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSK-----AG-------HEVEVFERLPI 34 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHh-----CC-------CceEEEeCCCC
Confidence 69999999999999988876 36 36888887643
No 362
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=53.36 E-value=5.6 Score=42.50 Aligned_cols=32 Identities=19% Similarity=0.369 Sum_probs=25.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.||||+|+|.||+..|+.|.. .+ -+|.|+|++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 489999999999988876632 12 369999985
No 363
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=53.31 E-value=11 Score=39.85 Aligned_cols=34 Identities=21% Similarity=0.405 Sum_probs=27.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
+-.|+|+|||.+|+++|..+.. .|+ ++.++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 4579999999999999998875 375 588999864
No 364
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=53.30 E-value=12 Score=37.91 Aligned_cols=33 Identities=21% Similarity=0.394 Sum_probs=26.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCc
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 345 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 345 (559)
+|+|+|||.+|+..|-.|.+ .| .++.++|+..-
T Consensus 2 dVvVIGaGiaGLsaA~~La~-----~G-------~~V~vlE~~~~ 34 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLAR-----NG-------HEIIVLEKSAM 34 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCCC
Confidence 79999999999999988865 36 36888887643
No 365
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=53.25 E-value=11 Score=40.31 Aligned_cols=38 Identities=21% Similarity=0.374 Sum_probs=29.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 345 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 345 (559)
..+|||+|||.||...|-.|..... .| -+|.++|+...
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQ--GT-------ADITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTT--TS-------SEEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcC--CC-------CcEEEEeCCCC
Confidence 4689999999999999998876420 24 36889998643
No 366
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=53.24 E-value=33 Score=33.80 Aligned_cols=48 Identities=19% Similarity=0.245 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 283 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 283 LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
++..+.+.+..+ ....++++|.|||..|...+.++. + .|. +.+..+|+
T Consensus 146 ~~~~~~~~~~~~-~~~g~~VlV~GaG~vG~~aiq~ak-~----~G~------~~vi~~~~ 193 (346)
T 4a2c_A 146 ITVGLHAFHLAQ-GCENKNVIIIGAGTIGLLAIQCAV-A----LGA------KSVTAIDI 193 (346)
T ss_dssp HHHHHHHHHHTT-CCTTSEEEEECCSHHHHHHHHHHH-H----TTC------SEEEEEES
T ss_pred HHHHHHHHHHhc-cCCCCEEEEECCCCcchHHHHHHH-H----cCC------cEEEEEec
Confidence 333444444443 346789999999988765544333 2 364 45666665
No 367
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=53.21 E-value=7.9 Score=39.72 Aligned_cols=106 Identities=10% Similarity=0.095 Sum_probs=47.1
Q ss_pred HHHHHHhCCCccc-ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcccc
Q 008629 287 VAALKLIGGTLAE-HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH 365 (559)
Q Consensus 287 l~Alr~~g~~l~d-~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~ 365 (559)
|+.-.+....+++ .||-|+|+|..|-.-++.+...-.....+. +-.+=+-++|++ . +......+.|-- .
T Consensus 13 ~~~~~~~~~~Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~--~~~elvav~d~~----~---~~a~~~a~~~~~-~ 82 (412)
T 4gqa_A 13 LGTENLYFQSMSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLP--KRPHLYALADQD----Q---AMAERHAAKLGA-E 82 (412)
T ss_dssp ------------CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSS--SEEEEEEEECSS----H---HHHHHHHHHHTC-S
T ss_pred cccccCccccccccceEEEEcCcHHHHHHHHHHHhccccccccC--CCeEEEEEEcCC----H---HHHHHHHHHcCC-C
Confidence 3444455556665 699999999887655555544311100010 001123355542 1 112222222211 0
Q ss_pred CCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHc
Q 008629 366 EPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMAS 403 (559)
Q Consensus 366 ~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~ 403 (559)
.-..++.|.++.-++|+++ ++++...=-+-++++|.+
T Consensus 83 ~~y~d~~~ll~~~~vD~V~-I~tp~~~H~~~~~~al~a 119 (412)
T 4gqa_A 83 KAYGDWRELVNDPQVDVVD-ITSPNHLHYTMAMAAIAA 119 (412)
T ss_dssp EEESSHHHHHHCTTCCEEE-ECSCGGGHHHHHHHHHHT
T ss_pred eEECCHHHHhcCCCCCEEE-ECCCcHHHHHHHHHHHHc
Confidence 1136899999988899887 566553223444444543
No 368
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=52.97 E-value=4.1 Score=42.96 Aligned_cols=25 Identities=28% Similarity=0.436 Sum_probs=21.3
Q ss_pred cccceEEEeCcChHHHHHHHHHHHH
Q 008629 297 LAEHRFLFLGAGEAGTGIAELIALE 321 (559)
Q Consensus 297 l~d~riv~~GAGsAgiGia~ll~~~ 321 (559)
....+|+|+|||.||+..|..|.+.
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~ 30 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQN 30 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhc
Confidence 3457899999999999999998763
No 369
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=52.97 E-value=13 Score=41.03 Aligned_cols=34 Identities=24% Similarity=0.449 Sum_probs=28.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
..+|||+|+|.||+..|..+... |. ++.++|+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~-----G~-------~V~liE~~~ 424 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR-----GY-------DVVLAEAGR 424 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCC
Confidence 46899999999999999988763 53 689999863
No 370
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=52.96 E-value=11 Score=39.91 Aligned_cols=34 Identities=21% Similarity=0.390 Sum_probs=26.8
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.+.+|+|+|||.+|+..|-.|.. .|+ ++.++|+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 44 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRL-----GGV-------DVMVLEQL 44 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 56789999999999999988865 375 46667654
No 371
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=52.95 E-value=13 Score=38.43 Aligned_cols=37 Identities=22% Similarity=0.278 Sum_probs=29.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 345 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 345 (559)
..+|||+|+|.||+..|..+.+ .|. ..+|.++|+..-
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~-----~g~-----~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRA-----SGW-----EGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHc-----cCc-----CCCEEEEECCCC
Confidence 4689999999999999998865 364 137999987643
No 372
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=52.88 E-value=11 Score=39.17 Aligned_cols=34 Identities=18% Similarity=0.179 Sum_probs=27.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
+.+|||+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~liE~~~ 39 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQ-----LGF-------KTVCIEKNE 39 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCC
Confidence 4579999999999999988865 253 689999874
No 373
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=52.80 E-value=11 Score=40.02 Aligned_cols=37 Identities=24% Similarity=0.408 Sum_probs=28.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
..+|||+|||.||+..|-.|..... .|+ ++.++|+.-
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~--~G~-------~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQ--QQA-------NITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCC--SSC-------EEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEECCCC
Confidence 4689999999999999988875310 253 688998854
No 374
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=52.74 E-value=9.4 Score=37.38 Aligned_cols=101 Identities=13% Similarity=0.173 Sum_probs=59.9
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhc----------hhhcc-c
Q 008629 297 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK----------KPWAH-E 364 (559)
Q Consensus 297 l~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k----------~~fA~-~ 364 (559)
++..+|+|.|| |-.|..+++.|++ .| .+++.+|+..- .....+...+ ..+.. +
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 87 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLK-----LN-------QVVIGLDNFST---GHQYNLDEVKTLVSTEQWSRFCFIEGD 87 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS---CCHHHHHHHHHTSCHHHHTTEEEEECC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCCC---CchhhhhhhhhccccccCCceEEEEcc
Confidence 45679999996 7788888777765 25 36888877421 1000111111 11111 1
Q ss_pred cCCCCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 008629 365 HEPVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 365 ~~~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 414 (559)
..+..++.++++ ++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 88 l~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 88 IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp TTCHHHHHHHTT--TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 122235777787 69999988875321 1334788888777778998643
No 375
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=52.70 E-value=8.6 Score=40.30 Aligned_cols=37 Identities=22% Similarity=0.396 Sum_probs=26.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 345 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 345 (559)
.+|||+|||.||...|-.|..... .|+ ++.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G~-------~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DRI-------DVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GGS-------EEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEEecCCC
Confidence 479999999999999998876431 243 6888887643
No 376
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=52.65 E-value=7.2 Score=38.30 Aligned_cols=90 Identities=8% Similarity=0.120 Sum_probs=48.9
Q ss_pred ccceEEEeCcChHHHH-HHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhc
Q 008629 298 AEHRFLFLGAGEAGTG-IAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 376 (559)
Q Consensus 298 ~d~riv~~GAGsAgiG-ia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~ 376 (559)
+..||.|+|+|..|.. .++.+.. ..|. +-+.++|++ . +......+.|- .+...++.|+++
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~----~~~~------~l~av~d~~----~---~~~~~~a~~~~--~~~~~~~~~ll~ 65 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTK----SERF------EFVGAFTPN----K---VKREKICSDYR--IMPFDSIESLAK 65 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTS----CSSS------EEEEEECSC----H---HHHHHHHHHHT--CCBCSCHHHHHT
T ss_pred ccCcEEEEecCHHHHHHHHHHHHh----CCCe------EEEEEECCC----H---HHHHHHHHHcC--CCCcCCHHHHHh
Confidence 4579999999988865 5554432 1121 223366653 1 11222222221 122578999998
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 008629 377 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 411 (559)
Q Consensus 377 ~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 411 (559)
++|+++ +++... ...++++...+. .++|+.
T Consensus 66 --~~D~V~-i~tp~~-~h~~~~~~al~~-gk~vl~ 95 (308)
T 3uuw_A 66 --KCDCIF-LHSSTE-THYEIIKILLNL-GVHVYV 95 (308)
T ss_dssp --TCSEEE-ECCCGG-GHHHHHHHHHHT-TCEEEE
T ss_pred --cCCEEE-EeCCcH-hHHHHHHHHHHC-CCcEEE
Confidence 799988 555453 455555543332 355553
No 377
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=52.55 E-value=12 Score=37.53 Aligned_cols=33 Identities=27% Similarity=0.395 Sum_probs=24.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+|+|+|||.||+..|-.|.+. ..|+ ++.++|+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~---~~G~-------~V~v~E~~ 34 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQA---RPLW-------AIDIVEKN 34 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHH---CTTS-------EEEEECSS
T ss_pred eEEEECCCHHHHHHHHHHHhc---CCCC-------CEEEEECC
Confidence 699999999999999888653 0143 56677764
No 378
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=52.53 E-value=11 Score=40.19 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=28.6
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
.+.+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-----G-------GRQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCCC
Confidence 346899999999999999888753 5 3689999864
No 379
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=52.31 E-value=13 Score=39.18 Aligned_cols=38 Identities=21% Similarity=0.338 Sum_probs=29.4
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCc
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 345 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 345 (559)
...+|||+|||.||+..|..|... +. ..+|.++|+..-
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~-----~~-----g~~V~lie~~~~ 47 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRAR-----DP-----GARVLIVSEDPE 47 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHH-----ST-----TCEEEEEESSSS
T ss_pred CcCCEEEECChHHHHHHHHHHHhc-----CC-----CCeEEEEeCCCC
Confidence 356899999999999999988653 21 257999998743
No 380
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=52.20 E-value=12 Score=38.79 Aligned_cols=33 Identities=27% Similarity=0.299 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
-+|+|+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQ-----LGM-------KVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 479999999999999987765 253 689999863
No 381
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=52.02 E-value=25 Score=35.49 Aligned_cols=45 Identities=20% Similarity=0.200 Sum_probs=28.6
Q ss_pred HHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 287 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 287 l~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
+.|+.....--.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 182 ~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~-----~Ga------~~Vi~~~~ 226 (378)
T 3uko_A 182 LGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKT-----AGA------SRIIGIDI 226 (378)
T ss_dssp HHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECS
T ss_pred HHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 3344333333457899999999877766555443 264 57888875
No 382
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=52.00 E-value=14 Score=39.06 Aligned_cols=36 Identities=14% Similarity=0.225 Sum_probs=28.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 345 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 345 (559)
.||||+|||.||+..|..|.+. |- ..+|.++|+..-
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~-----~~-----~~~V~lie~~~~ 37 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL-----SE-----TAEIIMFERGEY 37 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CS-----SSEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhh-----Cc-----CCCEEEEECCCC
Confidence 4899999999999999988753 21 247889988744
No 383
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=51.93 E-value=8 Score=37.99 Aligned_cols=34 Identities=24% Similarity=0.334 Sum_probs=25.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+|+|+|||.+|+.+|..|.+.. ..| .++.++|+.
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~--~~G-------~~V~v~Ek~ 36 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQT--SGP-------LYLAVWDKA 36 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC---CC-------EEEEEECSS
T ss_pred cEEEECCcHHHHHHHHHHHhhc--cCC-------ceEEEEECC
Confidence 7999999999999998886410 024 368888876
No 384
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=51.74 E-value=11 Score=39.02 Aligned_cols=32 Identities=19% Similarity=0.386 Sum_probs=26.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~-----~G~-------~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQ-----HDV-------DVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------eEEEEcCC
Confidence 579999999999999988765 374 67888865
No 385
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=51.74 E-value=9.4 Score=41.17 Aligned_cols=36 Identities=14% Similarity=0.085 Sum_probs=28.5
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
.+.+|||+|||.||+..|..|.. +.|+ ++.++|+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 35689999999999999988862 1364 688999864
No 386
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=51.53 E-value=27 Score=34.47 Aligned_cols=108 Identities=23% Similarity=0.241 Sum_probs=56.5
Q ss_pred CCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCcc---ccCCcCCCchh------chhhcc-
Q 008629 295 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI---VSSRKDSLQHF------KKPWAH- 363 (559)
Q Consensus 295 ~~l~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi---~~~R~~~l~~~------k~~fA~- 363 (559)
..++..+|+|.|| |-.|..+++.|++. ..| -+++.+|+..-- ...+.+.+... +..+..
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~---~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQEN---HPK-------AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAA 75 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHH---CTT-------SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEEC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhh---CCC-------CeEEEEECCCccccccccchhhhhhhhhccccCceEEEC
Confidence 3577889999976 66777777766541 014 468888874210 00000111111 111111
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecC
Q 008629 364 EHEPVNNLLDAVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 364 ~~~~~~~L~e~V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLS 414 (559)
+..+..++.++ ...++|++|=+.+.... -|..+++++.+..-+ |||.=|
T Consensus 76 Dl~d~~~~~~~-~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS 138 (362)
T 3sxp_A 76 DINNPLDLRRL-EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASS 138 (362)
T ss_dssp CTTCHHHHHHH-TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred CCCCHHHHHHh-hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCc
Confidence 11111234454 33479999987774431 134577777666555 888655
No 387
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=51.51 E-value=13 Score=39.50 Aligned_cols=36 Identities=31% Similarity=0.437 Sum_probs=28.6
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCc
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 345 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 345 (559)
...+|+|+|||.||+..|..+.. .|+ ++.++|+..-
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liEk~~~ 126 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELAL-----LGA-------RVVLVEKRIK 126 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCSS
T ss_pred CCCCEEEECccHHHHHHHHHHHH-----CCC-------eEEEEEeccc
Confidence 35689999999999999988865 364 6888887643
No 388
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=51.50 E-value=10 Score=39.45 Aligned_cols=33 Identities=21% Similarity=0.434 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAM-----YG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 4689999999999999988864 25 469999986
No 389
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=51.46 E-value=8.9 Score=38.02 Aligned_cols=89 Identities=18% Similarity=0.229 Sum_probs=49.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 379 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 379 (559)
.||.|+|+|..|...++.+.. ..+. +-+.++|++ . +......+.|- .+ ..++.|+++.-+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~----~~~~------~l~av~d~~----~---~~~~~~~~~~~--~~-~~~~~~~l~~~~ 63 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSG----NADA------RLVAVADAF----P---AAAEAIAGAYG--CE-VRTIDAIEAAAD 63 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHH----CTTE------EEEEEECSS----H---HHHHHHHHHTT--CE-ECCHHHHHHCTT
T ss_pred eEEEEECCCHHHHHHHHHHhh----CCCc------EEEEEECCC----H---HHHHHHHHHhC--CC-cCCHHHHhcCCC
Confidence 589999999988776665543 1121 223356653 1 11222222221 12 578999998777
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 008629 380 PTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 411 (559)
Q Consensus 380 PtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 411 (559)
+|+++ +++.+ ....++++...+. .++|+.
T Consensus 64 ~D~V~-i~tp~-~~h~~~~~~al~~-gk~v~~ 92 (331)
T 4hkt_A 64 IDAVV-ICTPT-DTHADLIERFARA-GKAIFC 92 (331)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred CCEEE-EeCCc-hhHHHHHHHHHHc-CCcEEE
Confidence 89887 44444 3555555554433 355553
No 390
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=51.42 E-value=68 Score=33.19 Aligned_cols=130 Identities=18% Similarity=0.231 Sum_probs=81.7
Q ss_pred HHhhCCCeeeeeccCCCCcHHHHHHHHcCCCCeee--cCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHH
Q 008629 238 KQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIA 315 (559)
Q Consensus 238 ~~~fGp~~lIq~EDf~~~~Af~lL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia 315 (559)
-.+| .++++ +--++ +.+.+.|.+|- ++||.| || .-=-.=+||=++.-.+..| +|+..||+++|-| . .+|
T Consensus 122 Ls~y-~D~Iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~TI~E~~G-~l~glkva~vGD~-~--nva 192 (340)
T 4ep1_A 122 LSHY-IDGIM-IRTFS-HADVEELAKES-SIPVINGLTD-DHHPCQALADLMTIYEETN-TFKGIKLAYVGDG-N--NVC 192 (340)
T ss_dssp HHHH-CSEEE-EECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCC-C--HHH
T ss_pred HHHh-CCEEE-EecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCC-c--hhH
Confidence 3456 56544 44443 34555666664 689998 54 2334556777776666665 5999999999998 2 378
Q ss_pred HHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcccc----CCCCCHHHHhcccCCcEEEeccCC
Q 008629 316 ELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTILIGSSGV 389 (559)
Q Consensus 316 ~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~----~~~~~L~e~V~~vkPtvLIG~S~~ 389 (559)
+-++.++.+ .|+ +|.++-.+|+.-.. .+-+.-+.+|+.. ....++.|+|+. .||+.-..=+
T Consensus 193 ~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~G~~v~~~~d~~eav~~--aDVvyt~~w~ 257 (340)
T 4ep1_A 193 HSLLLASAK-VGM-------HMTVATPVGYRPNE---EIVKKALAIAKETGAEIEILHNPELAVNE--ADFIYTDVWM 257 (340)
T ss_dssp HHHHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHCCCEEEESCHHHHHTT--CSEEEECCC-
T ss_pred HHHHHHHHH-cCC-------EEEEECCcccCCCH---HHHHHHHHHHHHcCCeEEEECCHHHHhCC--CCEEEecCcc
Confidence 888877766 475 68888888774321 1111122333321 113589999996 9999876543
No 391
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=51.13 E-value=11 Score=37.94 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=26.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+.+|||+|||.||+..|..+.+ .|. .-++.++|+.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-----~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRK-----LDG-----ETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT-----TCS-----SSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHh-----hCC-----CCCEEEEECC
Confidence 3679999999999999988864 353 2357888764
No 392
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=51.06 E-value=14 Score=38.06 Aligned_cols=23 Identities=30% Similarity=0.455 Sum_probs=19.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHH
Q 008629 299 EHRFLFLGAGEAGTGIAELIALE 321 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~ 321 (559)
+--|||+|||-+|+..|..|.++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~ 32 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQI 32 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhh
Confidence 45699999999999999988653
No 393
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=51.01 E-value=11 Score=39.02 Aligned_cols=32 Identities=28% Similarity=0.299 Sum_probs=26.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.+|||+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~-----~g~-------~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQ-----LGQ-------KVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 479999999999999988765 253 68999986
No 394
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=50.89 E-value=13 Score=38.51 Aligned_cols=36 Identities=22% Similarity=0.312 Sum_probs=28.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 345 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 345 (559)
.+|||+|+|.||+..|..|.+. ..| .++.++|+..-
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~---~~g-------~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKK---YPQ-------AEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---CSS-------SEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhh---CcC-------CcEEEEECCCC
Confidence 4899999999999999988763 113 47899988653
No 395
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=50.85 E-value=15 Score=36.08 Aligned_cols=101 Identities=13% Similarity=0.193 Sum_probs=57.8
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhc----------hhhcc-c
Q 008629 297 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK----------KPWAH-E 364 (559)
Q Consensus 297 l~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k----------~~fA~-~ 364 (559)
++..+|+|.|| |-.|-.+++.|++ .| .+++.+|+.- ....+.+...+ ..+.. +
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~D 89 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLK-----LD-------QKVVGLDNFA---TGHQRNLDEVRSLVSEKQWSNFKFIQGD 89 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCHHHHHHHHHHSCHHHHTTEEEEECC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCC---ccchhhHHHHhhhcccccCCceEEEECC
Confidence 55678999998 7777777777764 25 3688887741 11001121111 11111 1
Q ss_pred cCCCCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 008629 365 HEPVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 365 ~~~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 414 (559)
..+..++.++++ ++|++|=+.+..+. -+..+++++.+..-+-|||.=|
T Consensus 90 l~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 153 (352)
T 1sb8_A 90 IRNLDDCNNACA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 153 (352)
T ss_dssp TTSHHHHHHHHT--TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 111235777777 69999998876431 1345677776655566887544
No 396
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=50.80 E-value=12 Score=39.78 Aligned_cols=35 Identities=20% Similarity=0.389 Sum_probs=26.8
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 297 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 297 l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
-++..|+|+|||.+|+..|-.|.. .|+ ++.++|++
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 43 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRL-----AGV-------EVVVLERL 43 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred cCCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 456789999999999999988875 365 35666654
No 397
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=50.79 E-value=28 Score=34.68 Aligned_cols=56 Identities=13% Similarity=0.170 Sum_probs=35.2
Q ss_pred chhHHHHHHHHHHHHHhCCCccc--ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 277 GTASVVLAGVVAALKLIGGTLAE--HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 277 GTaaV~LAgll~Alr~~g~~l~d--~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
++-.+.++..+.|+...+.--.. ++++|.|| |..|..++.++.. .|. ++++.+|+.
T Consensus 137 a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~~ 195 (357)
T 2zb4_A 137 GAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICGT 195 (357)
T ss_dssp TTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeCC
Confidence 33344555556667333333346 89999998 8888777666543 363 468888763
No 398
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=50.73 E-value=14 Score=37.54 Aligned_cols=35 Identities=23% Similarity=0.397 Sum_probs=27.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
..|||+|||.+|+.+|-.|.+.. -| .++.++|+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~---pG-------~~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLA---PG-------RSLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC---TT-------SCEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcC---CC-------CeEEEEeCCC
Confidence 57999999999999998886520 15 3688999863
No 399
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=50.66 E-value=13 Score=38.58 Aligned_cols=34 Identities=32% Similarity=0.400 Sum_probs=27.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
+-.|+|+|||.||+..|..+.+ .|+ ++.++|+++
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~-----~G~-------~V~liEk~~ 37 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAK-----AKY-------NVLMADPKG 37 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECTTS
T ss_pred cceEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEECCC
Confidence 3579999999999999988865 364 689999654
No 400
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=50.66 E-value=11 Score=35.91 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=24.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
..|+|+|+|.||+..|..+.+ .|+ ++.++|+.
T Consensus 5 yDvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CcEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 369999999999998876654 364 57788864
No 401
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=50.46 E-value=6.7 Score=37.69 Aligned_cols=99 Identities=10% Similarity=0.068 Sum_probs=57.3
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCc--CCCchhchhhcc-ccCCCCCHHHH
Q 008629 299 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK--DSLQHFKKPWAH-EHEPVNNLLDA 374 (559)
Q Consensus 299 d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~--~~l~~~k~~fA~-~~~~~~~L~e~ 374 (559)
..+|+|.|| |.-|-.+++.|++. | ..++..++++. ++. ..+......+.. |-.+..+|.++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-----g------~~~V~~~~R~~----~~~~~~~l~~~~~~~~~~D~~d~~~l~~~ 69 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED-----G------TFKVRVVTRNP----RKKAAKELRLQGAEVVQGDQDDQVIMELA 69 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-----C------SSEEEEEESCT----TSHHHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhc-----C------CceEEEEEcCC----CCHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence 468999998 88888888877653 4 13577777641 110 001111111111 11222467788
Q ss_pred hcccCCcEEEeccCCCCC--------CCHHHHHHHHcCCCCcEEEecCC
Q 008629 375 VKVIKPTILIGSSGVGRT--------FTKEVIEAMASFNEKPLILALSN 415 (559)
Q Consensus 375 V~~vkPtvLIG~S~~~g~--------Ft~evv~~Ma~~~erPIIFaLSN 415 (559)
++. +|++|-+++.... .+..++++|.+..-+-||| .|-
T Consensus 70 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~-~S~ 115 (299)
T 2wm3_A 70 LNG--AYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVY-SGL 115 (299)
T ss_dssp HTT--CSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE-CCC
T ss_pred Hhc--CCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEE-EcC
Confidence 875 8999987653211 2556788887666667888 664
No 402
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=50.25 E-value=12 Score=38.84 Aligned_cols=33 Identities=21% Similarity=0.261 Sum_probs=26.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+.++||+|||.||+..|..+.+. | .++.++|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-----G-------IPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEccC
Confidence 45799999999999999877653 5 369999984
No 403
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=50.24 E-value=18 Score=34.41 Aligned_cols=87 Identities=17% Similarity=0.215 Sum_probs=53.6
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHh
Q 008629 297 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 375 (559)
Q Consensus 297 l~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V 375 (559)
-...||+|.|| |-.|-.+++.|++ .| .+++.+|++ ..| +.+ ..++.+++
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~D-l~d-----------~~~~~~~~ 59 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKG-----KN-------VEVIPTDVQ------DLD-ITN-----------VLAVNKFF 59 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTT-----SS-------EEEEEECTT------TCC-TTC-----------HHHHHHHH
T ss_pred cccceEEEECCCChHHHHHHHHHHh-----CC-------CeEEeccCc------cCC-CCC-----------HHHHHHHH
Confidence 44678999987 6677777666653 25 357877764 111 221 12467777
Q ss_pred cccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 008629 376 KVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 376 ~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 414 (559)
+.+++|++|=+.+.... -+..+++++.+..- .|||.=|
T Consensus 60 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS 113 (292)
T 1vl0_A 60 NEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQIST 113 (292)
T ss_dssp HHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred HhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEech
Confidence 76689999988875431 03566777765444 7888654
No 404
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=50.23 E-value=9.3 Score=40.60 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=19.1
Q ss_pred eEEEeCcChHHHHHHHHHHHHH
Q 008629 301 RFLFLGAGEAGTGIAELIALEI 322 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~ 322 (559)
-||++|||.+|+++|-.|.+..
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~ 62 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDAL 62 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHH
T ss_pred cEEEEcccHHHHHHHHHHHhcC
Confidence 4899999999999998887653
No 405
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=49.65 E-value=18 Score=33.18 Aligned_cols=100 Identities=14% Similarity=0.061 Sum_probs=54.4
Q ss_pred ccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc-ccCCCCCHHHHh
Q 008629 298 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 375 (559)
Q Consensus 298 ~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V 375 (559)
...+|+|.|| |-.|..+++.|++ .|- ..++++++++. ++.+.+. ....+.. +..+..++.+++
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~-----~~~-----g~~V~~~~r~~----~~~~~~~-~~~~~~~~D~~d~~~~~~~~ 67 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKE-----GSD-----KFVAKGLVRSA----QGKEKIG-GEADVFIGDITDADSINPAF 67 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHH-----TTT-----TCEEEEEESCH----HHHHHTT-CCTTEEECCTTSHHHHHHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHh-----cCC-----CcEEEEEEcCC----CchhhcC-CCeeEEEecCCCHHHHHHHH
Confidence 4578999996 6667667666654 220 13677777641 1000010 0111111 212223577777
Q ss_pred cccCCcEEEeccCCCCC----------------C-------------CHHHHHHHHcCCCCcEEEecC
Q 008629 376 KVIKPTILIGSSGVGRT----------------F-------------TKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 376 ~~vkPtvLIG~S~~~g~----------------F-------------t~evv~~Ma~~~erPIIFaLS 414 (559)
+. +|++|=+.+.... | +..+++.|.+..-+.|||.=|
T Consensus 68 ~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 68 QG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp TT--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred cC--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 74 8999977764321 1 356777777655566777533
No 406
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=49.64 E-value=19 Score=35.71 Aligned_cols=93 Identities=11% Similarity=0.137 Sum_probs=49.8
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcc
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 377 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 377 (559)
+..||.|+|+|..|-..++.+... .+. +-+.++|++ .++ .....+.|-- .....++.|+++.
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~----~~~------~~~av~d~~----~~~---~~~~a~~~~~-~~~~~~~~~ll~~ 65 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLA----GNG------EVVAVSSRT----LES---AQAFANKYHL-PKAYDKLEDMLAD 65 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHH----CSE------EEEEEECSC----SST---TCC---CCCC-SCEESCHHHHHTC
T ss_pred CceEEEEEechHHHHHHHHHHHhC----CCc------EEEEEEcCC----HHH---HHHHHHHcCC-CcccCCHHHHhcC
Confidence 457999999998887666554331 121 223456653 222 2222222210 0123689999987
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 008629 378 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 411 (559)
Q Consensus 378 vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 411 (559)
-++|+++ +++.. ....++++...+. .++++.
T Consensus 66 ~~~D~V~-i~tp~-~~h~~~~~~al~a-Gk~Vl~ 96 (329)
T 3evn_A 66 ESIDVIY-VATIN-QDHYKVAKAALLA-GKHVLV 96 (329)
T ss_dssp TTCCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred CCCCEEE-ECCCc-HHHHHHHHHHHHC-CCeEEE
Confidence 7789887 55544 4555655544332 355554
No 407
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=49.60 E-value=36 Score=33.54 Aligned_cols=47 Identities=21% Similarity=0.191 Sum_probs=30.8
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 284 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 284 Agll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
...+.+++..+.+ ..++++|+|||+.|.-.+.++..+ .| .+++.+|+
T Consensus 150 ~ta~~~l~~~~~~-~g~~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~ 196 (348)
T 4eez_A 150 VTTYKAIKVSGVK-PGDWQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEES
T ss_pred eeEEeeecccCCC-CCCEEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEEC
Confidence 3445677766653 568999999999886555444332 23 46887776
No 408
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=49.58 E-value=14 Score=38.31 Aligned_cols=34 Identities=26% Similarity=0.348 Sum_probs=27.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
+.+|+|+|||.||+..|..+.+ .|+ ++.++|+..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~-----~G~-------~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQ-----LGF-------NTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCC
Confidence 3579999999999999988865 363 699999853
No 409
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=49.54 E-value=12 Score=39.38 Aligned_cols=33 Identities=24% Similarity=0.420 Sum_probs=27.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
.+|||+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAAR-----HN-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 579999999999999988865 25 3699999863
No 410
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=49.53 E-value=12 Score=39.54 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=27.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
+..|+|+|||.+|+..|-.|.+ .|+ ++.++|++-
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~-----~G~-------~v~viEr~~ 38 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLAR-----QGV-------RVLVVERRP 38 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 4689999999999999988865 375 578888763
No 411
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=49.32 E-value=16 Score=38.44 Aligned_cols=37 Identities=19% Similarity=0.352 Sum_probs=28.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
..+|||+|||.||+..|..+.+. |. ...++.++|+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-----g~----~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-----YG----DANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----HG----GGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-----CC----CCCeEEEEECCC
Confidence 46899999999999999998764 20 124789999864
No 412
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=49.21 E-value=10 Score=38.03 Aligned_cols=36 Identities=28% Similarity=0.415 Sum_probs=30.1
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.|++.+|||+|+|..|..-++.|+.+ | .++.++|.+
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~-----G-------a~VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPT-----G-------CKLTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGG-----T-------CEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhC-----C-------CEEEEEcCC
Confidence 57889999999999999999988764 5 358888864
No 413
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=49.20 E-value=11 Score=35.88 Aligned_cols=83 Identities=23% Similarity=0.356 Sum_probs=53.5
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 008629 301 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 379 (559)
Q Consensus 301 riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 379 (559)
||+|.|| |-.|..+++.|++ .| .+++.+|+. ..| +.+ ..++.++++..+
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~D-~~d-----------~~~~~~~~~~~~ 56 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNP-----EE-------YDIYPFDKK------LLD-ITN-----------ISQVQQVVQEIR 56 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCT-----TT-------EEEEEECTT------TSC-TTC-----------HHHHHHHHHHHC
T ss_pred EEEEECCCCHHHHHHHHHHHh-----CC-------CEEEEeccc------ccC-CCC-----------HHHHHHHHHhcC
Confidence 8999996 7777777776653 24 368888771 111 221 135777888778
Q ss_pred CcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 008629 380 PTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 380 PtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 414 (559)
+|++|=+.+.... .+..+++++.+..-| +||.=|
T Consensus 57 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~v~~SS 106 (287)
T 3sc6_A 57 PHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAK-LVYIST 106 (287)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCE-EEEEEE
T ss_pred CCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCe-EEEEch
Confidence 9999988775531 034577777665554 887544
No 414
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=49.17 E-value=15 Score=38.45 Aligned_cols=33 Identities=15% Similarity=0.420 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+..|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~-----~G~-------~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGA-----LGK-------RVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----CcC-------EEEEEeCC
Confidence 4689999999999999988865 363 68899984
No 415
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=49.07 E-value=27 Score=34.55 Aligned_cols=84 Identities=10% Similarity=0.100 Sum_probs=46.4
Q ss_pred ccceEEEeCcChHHH-HHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhc
Q 008629 298 AEHRFLFLGAGEAGT-GIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 376 (559)
Q Consensus 298 ~d~riv~~GAGsAgi-Gia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~ 376 (559)
+..||.|+|+|..|. ..+..+ .. .|. +=+.++|++ .+| .....+.|- ...-..++.|+++
T Consensus 3 ~~~rvgiiG~G~~~~~~~~~~l----~~-~~~------~lvav~d~~----~~~---~~~~a~~~~-~~~~~~~~~~ll~ 63 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIYDMCQQL----ID-AGA------ELAGVFESD----SDN---RAKFTSLFP-SVPFAASAEQLIT 63 (336)
T ss_dssp -CCEEEEECCSSTHHHHHHHHH----HH-TTC------EEEEEECSC----TTS---CHHHHHHST-TCCBCSCHHHHHT
T ss_pred CccEEEEECCChHHHHHhhhhh----cC-CCc------EEEEEeCCC----HHH---HHHHHHhcC-CCcccCCHHHHhh
Confidence 346999999998764 333333 22 233 224577763 222 333333331 1122478999998
Q ss_pred ccCCcEEEeccCCCCCCCHHHHH-HHH
Q 008629 377 VIKPTILIGSSGVGRTFTKEVIE-AMA 402 (559)
Q Consensus 377 ~vkPtvLIG~S~~~g~Ft~evv~-~Ma 402 (559)
.-++|+++ +++.. .+-.+++. ++.
T Consensus 64 ~~~~D~V~-i~tp~-~~h~~~~~~al~ 88 (336)
T 2p2s_A 64 DASIDLIA-CAVIP-CDRAELALRTLD 88 (336)
T ss_dssp CTTCCEEE-ECSCG-GGHHHHHHHHHH
T ss_pred CCCCCEEE-EeCCh-hhHHHHHHHHHH
Confidence 77899887 55544 34445444 454
No 416
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=48.86 E-value=11 Score=38.23 Aligned_cols=97 Identities=11% Similarity=0.085 Sum_probs=51.7
Q ss_pred cccceEEEeC-cChHHHH-HH----HHHHHHHHHhcCCChhhh---cccEEEEcccCccccCCcCCCchhchhhcccc--
Q 008629 297 LAEHRFLFLG-AGEAGTG-IA----ELIALEISKQTKAPVEET---RKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-- 365 (559)
Q Consensus 297 l~d~riv~~G-AGsAgiG-ia----~ll~~~~~~~~G~s~eeA---~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~-- 365 (559)
.+..||.++| +|..|.+ .+ +.+... .++....+ .-++.++|++ .+ ..+.+|...
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~----~~~~l~~~~~~~~~~av~~~~-------~~----~a~~~a~~~~~ 68 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQ----GGVRLKNGDRIMPDPILVGRS-------AE----KVEALAKRFNI 68 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHH----TSEECTTSCEEEEEEEEECSS-------SH----HHHHHHHHTTC
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhc----CceeecCCcccceeeEEEcCC-------HH----HHHHHHHHhCC
Confidence 3456999999 9999987 66 444332 22211000 0001244432 11 112333321
Q ss_pred CC-CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 008629 366 EP-VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 411 (559)
Q Consensus 366 ~~-~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 411 (559)
+. ..++.|.++.-++|+++ +.+.. .+-.+++++..+. .++|+.
T Consensus 69 ~~~~~~~~~ll~~~~iD~V~-i~tp~-~~h~~~~~~al~~-Gk~V~~ 112 (383)
T 3oqb_A 69 ARWTTDLDAALADKNDTMFF-DAATT-QARPGLLTQAINA-GKHVYC 112 (383)
T ss_dssp CCEESCHHHHHHCSSCCEEE-ECSCS-SSSHHHHHHHHTT-TCEEEE
T ss_pred CcccCCHHHHhcCCCCCEEE-ECCCc-hHHHHHHHHHHHC-CCeEEE
Confidence 11 36899999988899888 55544 4666665554432 356554
No 417
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=48.85 E-value=6.6 Score=40.15 Aligned_cols=89 Identities=16% Similarity=0.194 Sum_probs=49.7
Q ss_pred ceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhccc
Q 008629 300 HRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 378 (559)
Q Consensus 300 ~riv~~GAG-sAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 378 (559)
.||.|+|+| .+|...+..|... .++ +-+.++|++ . +......+.| ..+...++.|+++.-
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~----~~~------~l~av~d~~----~---~~~~~~a~~~--g~~~~~~~~ell~~~ 63 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHH----PDA------QIVAACDPN----E---DVRERFGKEY--GIPVFATLAEMMQHV 63 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHC----TTE------EEEEEECSC----H---HHHHHHHHHH--TCCEESSHHHHHHHS
T ss_pred eEEEEEeCCHHHHHHHHHHHHhC----CCe------EEEEEEeCC----H---HHHHHHHHHc--CCCeECCHHHHHcCC
Confidence 589999999 8887776665431 221 234456653 1 1122222222 112246899999988
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcCCCCcEE
Q 008629 379 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLI 410 (559)
Q Consensus 379 kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPII 410 (559)
++|+++ +++.+ .+..++++...+. -++|+
T Consensus 64 ~vD~V~-i~tp~-~~H~~~~~~al~a-Gk~Vl 92 (387)
T 3moi_A 64 QMDAVY-IASPH-QFHCEHVVQASEQ-GLHII 92 (387)
T ss_dssp CCSEEE-ECSCG-GGHHHHHHHHHHT-TCEEE
T ss_pred CCCEEE-EcCCc-HHHHHHHHHHHHC-CCcee
Confidence 899998 55544 3444555443322 24554
No 418
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=48.68 E-value=18 Score=34.75 Aligned_cols=78 Identities=13% Similarity=0.132 Sum_probs=42.9
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhc-------cccCC
Q 008629 295 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-------HEHEP 367 (559)
Q Consensus 295 ~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA-------~~~~~ 367 (559)
.+|+++++||-||++ ||..-++..+.+ .|. +++++|++ . +.+......+. -|..+
T Consensus 7 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G~-------~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~Dv~~ 68 (271)
T 3tzq_B 7 AELENKVAIITGACG---GIGLETSRVLAR-AGA-------RVVLADLP----E---TDLAGAAASVGRGAVHHVVDLTN 68 (271)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TTC-------EEEEEECT----T---SCHHHHHHHHCTTCEEEECCTTC
T ss_pred cCCCCCEEEEECCCc---HHHHHHHHHHHH-CCC-------EEEEEcCC----H---HHHHHHHHHhCCCeEEEECCCCC
Confidence 367888999999753 344444444444 363 58888874 1 12322222211 11112
Q ss_pred CCCHHHHhccc-----CCcEEEeccCCC
Q 008629 368 VNNLLDAVKVI-----KPTILIGSSGVG 390 (559)
Q Consensus 368 ~~~L~e~V~~v-----kPtvLIG~S~~~ 390 (559)
..++.++++.+ +.|+||=..+..
T Consensus 69 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 69 EVSVRALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455566554 799999877654
No 419
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=48.59 E-value=44 Score=31.86 Aligned_cols=76 Identities=11% Similarity=0.043 Sum_probs=41.1
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc-ccCCCCCHHHHh
Q 008629 297 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 375 (559)
Q Consensus 297 l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V 375 (559)
++++++||-||++ ||...++..+.+ .|. +++++|++- . .+...+..+.. |..+..++.+++
T Consensus 26 ~~~k~vlVTGas~---gIG~aia~~l~~-~G~-------~V~~~~r~~----~---~~~~~~~~~~~~Dv~d~~~v~~~~ 87 (260)
T 3un1_A 26 NQQKVVVITGASQ---GIGAGLVRAYRD-RNY-------RVVATSRSI----K---PSADPDIHTVAGDISKPETADRIV 87 (260)
T ss_dssp TTCCEEEESSCSS---HHHHHHHHHHHH-TTC-------EEEEEESSC----C---CCSSTTEEEEESCTTSHHHHHHHH
T ss_pred cCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCCh----h---hcccCceEEEEccCCCHHHHHHHH
Confidence 5677899999753 344444444444 363 688888741 1 11111212211 222223455566
Q ss_pred ccc-----CCcEEEeccCCC
Q 008629 376 KVI-----KPTILIGSSGVG 390 (559)
Q Consensus 376 ~~v-----kPtvLIG~S~~~ 390 (559)
+.+ ++|+||=..+..
T Consensus 88 ~~~~~~~g~iD~lv~nAg~~ 107 (260)
T 3un1_A 88 REGIERFGRIDSLVNNAGVF 107 (260)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHCCCCCEEEECCCCC
Confidence 554 799999877653
No 420
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=48.44 E-value=17 Score=34.50 Aligned_cols=37 Identities=19% Similarity=0.314 Sum_probs=23.0
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+|++.+++|.||++ ||...++..+.+ .|. +++++|++
T Consensus 2 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G~-------~V~~~~r~ 38 (254)
T 1hdc_A 2 DLSGKTVIITGGAR---GLGAEAARQAVA-AGA-------RVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred CCCCCEEEEECCCc---HHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 46778999999743 344444444444 363 58888764
No 421
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=48.43 E-value=15 Score=37.01 Aligned_cols=44 Identities=23% Similarity=0.144 Sum_probs=27.3
Q ss_pred HHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 287 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 287 l~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
+.|+...+.--..++|+|.|+|..|...+.++.. .|. +++.+|+
T Consensus 178 ~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~-----~Ga-------~Vi~~~~ 221 (363)
T 3uog_A 178 WFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKA-----TGA-------EVIVTSS 221 (363)
T ss_dssp HHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEec
Confidence 3444323333457899999999777666555432 363 5777765
No 422
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=48.39 E-value=16 Score=35.21 Aligned_cols=101 Identities=14% Similarity=0.178 Sum_probs=55.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc------ccCCCCCHHH
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH------EHEPVNNLLD 373 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~------~~~~~~~L~e 373 (559)
.||.|+|+|..|..+|..|... | .+++++|++.= +.+.+......... ..-...+..|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 67 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----G-------NDVTLIDQWPA----HIEAIRKNGLIADFNGEEVVANLPIFSPEE 67 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH----HHHHHHHHCEEEEETTEEEEECCCEECGGG
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEECCHH----HHHHHHhCCEEEEeCCCeeEecceeecchh
Confidence 4899999999999999888652 5 36888887421 00001100000000 0000012223
Q ss_pred Hhccc-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 008629 374 AVKVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 418 (559)
Q Consensus 374 ~V~~v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 418 (559)
+.+.+ +.|++|= +..+ -..+++++.++.+. +..+|..++|...
T Consensus 68 ~~~~~~~~d~vi~-~v~~-~~~~~v~~~l~~~l~~~~~iv~~~~g~~ 112 (316)
T 2ew2_A 68 IDHQNEQVDLIIA-LTKA-QQLDAMFKAIQPMITEKTYVLCLLNGLG 112 (316)
T ss_dssp CCTTSCCCSEEEE-CSCH-HHHHHHHHHHGGGCCTTCEEEECCSSSC
T ss_pred hcccCCCCCEEEE-Eecc-ccHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 22211 4787773 3333 24688888887643 4678888998653
No 423
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=48.39 E-value=40 Score=33.85 Aligned_cols=50 Identities=20% Similarity=0.084 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 282 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 282 ~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
.++..+.++.....--..++|+|+|+|..|...+.+... .|. ++++.+|+
T Consensus 174 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~-----~Ga------~~Vi~~~~ 223 (371)
T 1f8f_A 174 GIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKV-----CGA------SIIIAVDI 223 (371)
T ss_dssp HHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHH-----HTC------SEEEEEES
T ss_pred hHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 333444455323333356899999999877766655443 263 46887775
No 424
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=48.38 E-value=42 Score=33.63 Aligned_cols=33 Identities=15% Similarity=0.300 Sum_probs=24.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.++|+|.|||..|..++.++.. .|. +++.+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~-----~Ga-------~Vi~~~~~ 213 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRT-----YGL-------EVWMANRR 213 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHH-----HTC-------EEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 8999999998777776665543 252 68888764
No 425
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=48.30 E-value=16 Score=35.94 Aligned_cols=37 Identities=30% Similarity=0.593 Sum_probs=28.2
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 297 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 297 l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
..+.-|+|+|||+||+..|-.|.+. +.|+ ++.++|+.
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~---r~G~-------~V~viEk~ 99 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKN---RPDL-------KVCIIESS 99 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSS
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHh---CCCC-------eEEEEECC
Confidence 3466799999999999999888653 2354 68888875
No 426
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=48.28 E-value=14 Score=38.40 Aligned_cols=30 Identities=23% Similarity=0.503 Sum_probs=23.8
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
||.|+|+|..|..+|..+.+ | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~------G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL------Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT------T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC------C-------CEEEEEECC
Confidence 79999999999999887752 3 358888874
No 427
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=47.97 E-value=12 Score=35.39 Aligned_cols=37 Identities=19% Similarity=0.226 Sum_probs=23.5
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+|++.++||.||+. ||...++..+.+ .|. +++++|++
T Consensus 3 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G~-------~V~~~~r~ 39 (253)
T 1hxh_A 3 RLQGKVALVTGGAS---GVGLEVVKLLLG-EGA-------KVAFSDIN 39 (253)
T ss_dssp TTTTCEEEETTTTS---HHHHHHHHHHHH-TTC-------EEEEECSC
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 57788999999743 344445555544 363 58887764
No 428
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=47.90 E-value=13 Score=39.35 Aligned_cols=35 Identities=17% Similarity=0.515 Sum_probs=27.7
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
.+.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liE~~~ 40 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAM-----RGH-------RVLLLEREA 40 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEccCC
Confidence 34689999999999999887754 364 588888874
No 429
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=47.83 E-value=17 Score=37.81 Aligned_cols=33 Identities=24% Similarity=0.247 Sum_probs=27.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+-.++|+|||.||+..|..+.+. | .++.++|+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 35 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-----G-------LKTALIEKY 35 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 35699999999999999888763 6 368899986
No 430
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=47.75 E-value=19 Score=34.66 Aligned_cols=82 Identities=18% Similarity=0.217 Sum_probs=40.3
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc-ccCCCCCHH
Q 008629 294 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLL 372 (559)
Q Consensus 294 g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~ 372 (559)
+.++.++++||-||++ ||...++..+.+ .|. +++++|++- ++.+.+...+..+.. |..+..++.
T Consensus 11 ~~~~~~k~vlVTGas~---gIG~aia~~l~~-~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~Dv~d~~~v~ 75 (266)
T 3p19_A 11 GRGSMKKLVVITGASS---GIGEAIARRFSE-EGH-------PLLLLARRV----ERLKALNLPNTLCAQVDVTDKYTFD 75 (266)
T ss_dssp ----CCCEEEEESTTS---HHHHHHHHHHHH-TTC-------CEEEEESCH----HHHHTTCCTTEEEEECCTTCHHHHH
T ss_pred CCCCCCCEEEEECCCC---HHHHHHHHHHHH-CCC-------EEEEEECCH----HHHHHhhcCCceEEEecCCCHHHHH
Confidence 3457788999999753 444455555544 363 588887641 110111111111111 212223455
Q ss_pred HHhccc-----CCcEEEeccCCC
Q 008629 373 DAVKVI-----KPTILIGSSGVG 390 (559)
Q Consensus 373 e~V~~v-----kPtvLIG~S~~~ 390 (559)
++++.+ ++|+||=..+..
T Consensus 76 ~~~~~~~~~~g~iD~lvnnAg~~ 98 (266)
T 3p19_A 76 TAITRAEKIYGPADAIVNNAGMM 98 (266)
T ss_dssp HHHHHHHHHHCSEEEEEECCCCC
T ss_pred HHHHHHHHHCCCCCEEEECCCcC
Confidence 556544 789999777653
No 431
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=47.59 E-value=23 Score=37.16 Aligned_cols=105 Identities=14% Similarity=0.101 Sum_probs=61.1
Q ss_pred cceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcccEEEE--ccc-------CccccCCcCCCchhchhhccccCCC
Q 008629 299 EHRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLV--DSK-------GLIVSSRKDSLQHFKKPWAHEHEPV 368 (559)
Q Consensus 299 d~riv~~G-AGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lv--D~~-------GLi~~~R~~~l~~~k~~fA~~~~~~ 368 (559)
..||.|+| ||..|..+|-.|+. .++--| ...+.|+ |.+ |..- | |.+-..+|.+...-.
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~-----~~l~~e--~~~l~L~d~d~~~~~~~~~G~am----D-L~h~~~p~~~~v~i~ 99 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLAS-----GEVFGQ--DQPIALKLLGSERSFQALEGVAM----E-LEDSLYPLLREVSIG 99 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHH-----TTTTCT--TCCEEEEEECCGGGHHHHHHHHH----H-HHTTTCTTEEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHc-----CCcCCC--CceeEEEecCccchhhhhHHHHH----h-HHhhhhhhcCCcEEe
Confidence 36999999 79999988877765 244111 0125554 332 2211 1 333333443322212
Q ss_pred CCHHHHhcccCCcEEEeccCCC---CC-----------CCHHHHHHHHcC-CCCcEEEecCCCC
Q 008629 369 NNLLDAVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASF-NEKPLILALSNPT 417 (559)
Q Consensus 369 ~~L~e~V~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~-~erPIIFaLSNPt 417 (559)
.+..++.+. .|++|=+.+.+ |- .=+++++.+.++ +..-||+-.|||.
T Consensus 100 ~~~y~~~~d--aDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPv 161 (375)
T 7mdh_A 100 IDPYEVFED--VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPC 161 (375)
T ss_dssp SCHHHHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred cCCHHHhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCch
Confidence 457778876 88877454433 31 113455566665 7889999999997
No 432
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=47.53 E-value=11 Score=38.17 Aligned_cols=35 Identities=17% Similarity=0.408 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCcc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 346 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi 346 (559)
..++||+|+|.||+..|..+.+ .| ++.++|+.-..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~-----~g--------~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ-----TY--------EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT-----TS--------EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhh-----cC--------CEEEEECCCCC
Confidence 3589999999999999988843 23 79999986543
No 433
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=47.49 E-value=16 Score=37.82 Aligned_cols=35 Identities=23% Similarity=0.418 Sum_probs=28.4
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 297 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 297 l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
-...+|+|+|||.||+..|-.|.++ |. ++.++++.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~-----G~-------~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA-----GH-------DVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT-----SC-------EEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEecc
Confidence 3467999999999999999888753 63 68888876
No 434
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=47.48 E-value=13 Score=35.07 Aligned_cols=78 Identities=26% Similarity=0.351 Sum_probs=42.9
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhc-------cccCC
Q 008629 295 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-------HEHEP 367 (559)
Q Consensus 295 ~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA-------~~~~~ 367 (559)
.++++.++||.||++ ||...++..+.+ .|. +++++|++- +.+......+. -|..+
T Consensus 5 m~l~~k~vlITGas~---gIG~~~a~~l~~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~~ 66 (261)
T 3n74_A 5 MSLEGKVALITGAGS---GFGEGMAKRFAK-GGA-------KVVIVDRDK-------AGAERVAGEIGDAALAVAADISK 66 (261)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TTC-------EEEEEESCH-------HHHHHHHHHHCTTEEEEECCTTS
T ss_pred ccCCCCEEEEECCCc---hHHHHHHHHHHH-CCC-------EEEEEcCCH-------HHHHHHHHHhCCceEEEEecCCC
Confidence 467889999999864 333344444443 363 588888641 11222221111 11122
Q ss_pred CCCHHHHhccc-----CCcEEEeccCCC
Q 008629 368 VNNLLDAVKVI-----KPTILIGSSGVG 390 (559)
Q Consensus 368 ~~~L~e~V~~v-----kPtvLIG~S~~~ 390 (559)
..++.++++.+ ++|+||=..+..
T Consensus 67 ~~~~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 67 EADVDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 23456666655 799999877654
No 435
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=47.23 E-value=77 Score=30.14 Aligned_cols=76 Identities=14% Similarity=0.245 Sum_probs=40.6
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHh
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 375 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V 375 (559)
+|++.++||.||++ ||...++..+.+ .|. +++++|++. .+..... .+.-|..+..++.+++
T Consensus 5 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G~-------~V~~~~r~~----~~~~~~~----~~~~Dl~~~~~v~~~~ 65 (264)
T 2dtx_A 5 DLRDKVVIVTGASM---GIGRAIAERFVD-EGS-------KVIDLSIHD----PGEAKYD----HIECDVTNPDQVKASI 65 (264)
T ss_dssp GGTTCEEEEESCSS---HHHHHHHHHHHH-TTC-------EEEEEESSC----CCSCSSE----EEECCTTCHHHHHHHH
T ss_pred ccCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEecCc----ccCCceE----EEEecCCCHHHHHHHH
Confidence 36778899999753 444555555544 363 588887641 1111111 1111211223455555
Q ss_pred ccc-----CCcEEEeccCCC
Q 008629 376 KVI-----KPTILIGSSGVG 390 (559)
Q Consensus 376 ~~v-----kPtvLIG~S~~~ 390 (559)
+.+ ++|+||=..+..
T Consensus 66 ~~~~~~~g~iD~lv~~Ag~~ 85 (264)
T 2dtx_A 66 DHIFKEYGSISVLVNNAGIE 85 (264)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCCC
Confidence 544 699999877653
No 436
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=47.21 E-value=45 Score=31.38 Aligned_cols=77 Identities=14% Similarity=0.197 Sum_probs=40.1
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchh------hcc-ccCCC
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP------WAH-EHEPV 368 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~------fA~-~~~~~ 368 (559)
++++.++||-||++ ||..-++..+.+ .|. +++++|++- .+ +...... +.. |..+.
T Consensus 4 ~l~~k~~lVTGas~---gIG~aia~~l~~-~G~-------~V~~~~r~~----~~---~~~~~~~~~~~~~~~~~Dv~~~ 65 (257)
T 3tpc_A 4 QLKSRVFIVTGASS---GLGAAVTRMLAQ-EGA-------TVLGLDLKP----PA---GEEPAAELGAAVRFRNADVTNE 65 (257)
T ss_dssp CCTTCEEEEESTTS---HHHHHHHHHHHH-TTC-------EEEEEESSC----C---------------CEEEECCTTCH
T ss_pred ccCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCCh----HH---HHHHHHHhCCceEEEEccCCCH
Confidence 57788999999853 344445555444 363 588887641 11 1111111 111 21122
Q ss_pred CCHHHHhccc-----CCcEEEeccCCC
Q 008629 369 NNLLDAVKVI-----KPTILIGSSGVG 390 (559)
Q Consensus 369 ~~L~e~V~~v-----kPtvLIG~S~~~ 390 (559)
.++.++++.+ +.|+||=..+..
T Consensus 66 ~~v~~~~~~~~~~~g~id~lv~nAg~~ 92 (257)
T 3tpc_A 66 ADATAALAFAKQEFGHVHGLVNCAGTA 92 (257)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455566544 799999776643
No 437
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=47.18 E-value=13 Score=38.93 Aligned_cols=37 Identities=14% Similarity=0.276 Sum_probs=28.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCcc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 346 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi 346 (559)
.+|||+|||.||+..|..+.+.. .| .++.++|+...+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~~ 73 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRND---EN-------ANVVTLEKGEIY 73 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEECSSSCC
T ss_pred ceEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCCC
Confidence 58999999999999999887531 13 479999987543
No 438
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=47.09 E-value=35 Score=34.58 Aligned_cols=49 Identities=20% Similarity=0.145 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 282 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 282 ~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
.++..+.|++.. .--..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 170 ~~~ta~~al~~~-~~~~g~~VlV~GaG~vG~~aiqlAk~-----~Ga------~~Vi~~~~ 218 (398)
T 1kol_A 170 ILPTGYHGAVTA-GVGPGSTVYVAGAGPVGLAAAASARL-----LGA------AVVIVGDL 218 (398)
T ss_dssp HHHHHHHHHHHT-TCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred HHHHHHHHHHHc-CCCCCCEEEEECCcHHHHHHHHHHHH-----CCC------CeEEEEcC
Confidence 344556667643 33356899999999887766554432 364 46887775
No 439
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=46.97 E-value=37 Score=34.05 Aligned_cols=45 Identities=18% Similarity=0.082 Sum_probs=28.3
Q ss_pred HHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 287 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 287 l~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
+.++......-..++|+|.|||..|...+.+... .|. ++++.+|+
T Consensus 179 ~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~-----~Ga------~~Vi~~~~ 223 (373)
T 2fzw_A 179 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKV-----AGA------SRIIGVDI 223 (373)
T ss_dssp HHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred HHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 3344323333456899999999877766655543 264 46888775
No 440
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=46.96 E-value=20 Score=35.76 Aligned_cols=93 Identities=13% Similarity=0.111 Sum_probs=50.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 379 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 379 (559)
.||.|+|+|..|...++.+.. +..|. +-+.++|++ . +......+.|-.......++.|+++.-+
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~---~~~~~------~l~av~d~~----~---~~~~~~~~~~g~~~~~~~~~~~ll~~~~ 66 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITN---KLSGA------EIVAVTDVN----Q---EAAQKVVEQYQLNATVYPNDDSLLADEN 66 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHH---TCSSE------EEEEEECSS----H---HHHHHHHHHTTCCCEEESSHHHHHHCTT
T ss_pred EEEEEECccHHHHHHHHHHHh---hCCCc------EEEEEEcCC----H---HHHHHHHHHhCCCCeeeCCHHHHhcCCC
Confidence 489999999988766655542 11121 223356653 1 1122222222100112368999999878
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 008629 380 PTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 411 (559)
Q Consensus 380 PtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 411 (559)
+|+++ +++.+ ....++++...+.. ++|+.
T Consensus 67 ~D~V~-i~tp~-~~h~~~~~~al~~G-k~vl~ 95 (344)
T 3mz0_A 67 VDAVL-VTSWG-PAHESSVLKAIKAQ-KYVFC 95 (344)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHTT-CEEEE
T ss_pred CCEEE-ECCCc-hhHHHHHHHHHHCC-CcEEE
Confidence 89888 44434 45666666554433 55554
No 441
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=46.90 E-value=16 Score=38.18 Aligned_cols=33 Identities=27% Similarity=0.315 Sum_probs=26.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+-+|||+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~ 38 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAAD-----EGL-------KVAIVERY 38 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 4589999999999999977754 363 58999985
No 442
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=46.89 E-value=9.2 Score=40.14 Aligned_cols=98 Identities=17% Similarity=0.209 Sum_probs=52.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc-ccCCCCCHHHHhccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 378 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~v 378 (559)
.+|+|+|.|..|.-+|++|.. .|. .+.++|++ .++-+.+.....+... +......|.++ .--
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~-----~g~-------~vvvId~d----~~~v~~~~~~g~~vi~GDat~~~~L~~a-gi~ 67 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLS-----SGV-------KMVVLDHD----PDHIETLRKFGMKVFYGDATRMDLLESA-GAA 67 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECC----HHHHHHHHHTTCCCEESCTTCHHHHHHT-TTT
T ss_pred CeEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEECC----HHHHHHHHhCCCeEEEcCCCCHHHHHhc-CCC
Confidence 479999999999999998875 364 58888875 1110111111100100 11111224444 223
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 008629 379 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 415 (559)
Q Consensus 379 kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 415 (559)
+++++|=+.... .-+..++....+.+...-|++.+|
T Consensus 68 ~A~~viv~~~~~-~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 68 KAEVLINAIDDP-QTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp TCSEEEECCSSH-HHHHHHHHHHHHHCTTCEEEEEES
T ss_pred ccCEEEECCCCh-HHHHHHHHHHHHhCCCCeEEEEEC
Confidence 588888665532 234444554445566645555554
No 443
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=46.88 E-value=16 Score=35.30 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=24.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.--++|+|||.||+..|-.+.. .|+ ++.++|+.
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar-----~g~-------~v~lie~~ 38 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGR-----ARK-------QIALFDNN 38 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEECS
T ss_pred CcCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 3458999999999987755433 354 68889874
No 444
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=46.87 E-value=32 Score=33.69 Aligned_cols=102 Identities=16% Similarity=0.118 Sum_probs=58.0
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCch-----hchhhcc-ccCCCC
Q 008629 297 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-----FKKPWAH-EHEPVN 369 (559)
Q Consensus 297 l~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~-----~k~~fA~-~~~~~~ 369 (559)
++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.. .+...+.. .+..+.. +..+..
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 70 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQT-----MG-------ATVKGYSLTA----PTVPSLFETARVADGMQSEIGDIRDQN 70 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----SSSSCHHHHTTTTTTSEEEECCTTCHH
T ss_pred hCCCEEEEECCCchHHHHHHHHHHh-----CC-------CeEEEEeCCC----cccchhhHhhccCCceEEEEccccCHH
Confidence 44578999996 7777777777764 25 3688887741 11111110 0111111 111223
Q ss_pred CHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCC-CCcEEEecC
Q 008629 370 NLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFN-EKPLILALS 414 (559)
Q Consensus 370 ~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~-erPIIFaLS 414 (559)
++.++++.+++|++|=+.+.+.. -|..+++++.+.. -+.|||.=|
T Consensus 71 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 71 KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred HHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 57778887789999988875421 0233566665543 467888655
No 445
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=46.84 E-value=28 Score=34.71 Aligned_cols=48 Identities=21% Similarity=0.093 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 282 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 282 ~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
.++..+.|++..+.+ ..++|+|.|||..|...+.+... .|. + ++.+|+
T Consensus 153 ~~~ta~~al~~~~~~-~g~~VlV~GaG~vG~~a~qla~~-----~Ga------~-Vi~~~~ 200 (352)
T 1e3j_A 153 PLSVGVHACRRAGVQ-LGTTVLVIGAGPIGLVSVLAAKA-----YGA------F-VVCTAR 200 (352)
T ss_dssp HHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC------E-EEEEES
T ss_pred hHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------E-EEEEcC
Confidence 444455666555433 46899999998777666554432 363 3 777765
No 446
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=46.73 E-value=16 Score=37.66 Aligned_cols=34 Identities=12% Similarity=0.200 Sum_probs=27.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
+|||+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADH---PD-------ADVTAYEMND 35 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCC
Confidence 6999999999999999987641 13 4799999865
No 447
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=46.68 E-value=13 Score=39.30 Aligned_cols=39 Identities=31% Similarity=0.397 Sum_probs=29.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHH-------hcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISK-------QTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~-------~~G~s~eeA~~~i~lvD~~G 344 (559)
..+|||+|||.||.-.|-.|...+.. ..|+ ++.++++.-
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~-------~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKL-------NITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSC-------EEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCC-------eEEEEeCCC
Confidence 46899999999999999988774310 0254 688888753
No 448
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=46.58 E-value=38 Score=34.05 Aligned_cols=36 Identities=17% Similarity=0.110 Sum_probs=24.9
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
--..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 224 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKA-----AGA------SRIIGVGT 224 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 3356899999999887766655443 263 46887775
No 449
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=46.50 E-value=32 Score=34.25 Aligned_cols=44 Identities=25% Similarity=0.262 Sum_probs=29.0
Q ss_pred HHHHHHHhCCCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 286 VVAALKLIGGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 286 ll~Alr~~g~~l~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
.+.+++..+ .-.+++++|.|| |..|..+++++.. .|. +++.+|+
T Consensus 158 a~~~l~~~~-~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~Ga-------~V~~~~~ 202 (347)
T 2hcy_A 158 VYKALKSAN-LMAGHWVAISGAAGGLGSLAVQYAKA-----MGY-------RVLGIDG 202 (347)
T ss_dssp HHHHHHTTT-CCTTCEEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEEEC
T ss_pred HHHHHHhcC-CCCCCEEEEECCCchHHHHHHHHHHH-----CCC-------cEEEEcC
Confidence 355665443 235689999999 7777777766543 362 5777775
No 450
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=46.41 E-value=16 Score=34.57 Aligned_cols=36 Identities=28% Similarity=0.266 Sum_probs=22.0
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 297 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 297 l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
|++.++||.||+. ||...++..+.+ .|. +++++|+.
T Consensus 2 l~~k~vlVTGas~---giG~~ia~~l~~-~G~-------~V~~~~r~ 37 (255)
T 2q2v_A 2 LKGKTALVTGSTS---GIGLGIAQVLAR-AGA-------NIVLNGFG 37 (255)
T ss_dssp CTTCEEEESSCSS---HHHHHHHHHHHH-TTC-------EEEEECSS
T ss_pred CCCCEEEEeCCCc---HHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 5678899999743 334444444444 363 57777764
No 451
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=46.40 E-value=36 Score=31.58 Aligned_cols=38 Identities=24% Similarity=0.285 Sum_probs=24.4
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 295 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 295 ~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
..|++.++||.||++ ||...|+..+.+ .|. +++++|++
T Consensus 10 ~~l~~k~vlITGas~---gIG~~ia~~l~~-~G~-------~V~~~~r~ 47 (247)
T 3i1j_A 10 ELLKGRVILVTGAAR---GIGAAAARAYAA-HGA-------SVVLLGRT 47 (247)
T ss_dssp TTTTTCEEEESSTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred ccCCCCEEEEeCCCC---hHHHHHHHHHHH-CCC-------EEEEEecC
Confidence 357888999999853 344445555544 363 58888775
No 452
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=46.36 E-value=17 Score=37.52 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=27.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCc
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 345 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 345 (559)
+|||+|+|.||+..|..+.+.. .| .++.++|+...
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~ 36 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLH---PD-------AEIQWYEKGDF 36 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC---TT-------SEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHHhC---cC-------CeEEEEECCCc
Confidence 6999999999999999887631 13 47999998653
No 453
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=46.10 E-value=16 Score=36.44 Aligned_cols=101 Identities=19% Similarity=0.218 Sum_probs=59.8
Q ss_pred CCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhch-------hhcc-cc
Q 008629 295 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-------PWAH-EH 365 (559)
Q Consensus 295 ~~l~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~-------~fA~-~~ 365 (559)
..+++.+|+|.|| |..|..+++.|++. .|. .+++++|++-- .+...+. .+.. +.
T Consensus 17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~----~g~------~~V~~~~r~~~-------~~~~~~~~~~~~~v~~~~~Dl 79 (344)
T 2gn4_A 17 NMLDNQTILITGGTGSFGKCFVRKVLDT----TNA------KKIIVYSRDEL-------KQSEMAMEFNDPRMRFFIGDV 79 (344)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHH----CCC------SEEEEEESCHH-------HHHHHHHHHCCTTEEEEECCT
T ss_pred HhhCCCEEEEECCCcHHHHHHHHHHHhh----CCC------CEEEEEECChh-------hHHHHHHHhcCCCEEEEECCC
Confidence 4477889999996 88888888877652 142 46888876411 0111111 1111 11
Q ss_pred CCCCCHHHHhcccCCcEEEeccCCCCC----C------------CHHHHHHHHcCCCCcEEEecC
Q 008629 366 EPVNNLLDAVKVIKPTILIGSSGVGRT----F------------TKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 366 ~~~~~L~e~V~~vkPtvLIG~S~~~g~----F------------t~evv~~Ma~~~erPIIFaLS 414 (559)
.+..++.++++ ++|++|=+.+.... . |..+++++.+..-+-|||.=|
T Consensus 80 ~d~~~l~~~~~--~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS 142 (344)
T 2gn4_A 80 RDLERLNYALE--GVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALST 142 (344)
T ss_dssp TCHHHHHHHTT--TCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCHHHHHHHHh--cCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC
Confidence 22235677777 59999998876531 0 235666666665567888554
No 454
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=46.09 E-value=20 Score=34.91 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=56.8
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccC---CcCCCchhc------hhhcc-ccCCC
Q 008629 300 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS---RKDSLQHFK------KPWAH-EHEPV 368 (559)
Q Consensus 300 ~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~---R~~~l~~~k------~~fA~-~~~~~ 368 (559)
.+|+|.|| |-.|..+++.|++ .| .+++++|+.---..+ ..+.+...+ ..+.. +..+.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~ 70 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLE-----AG-------YLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQ 70 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCH
T ss_pred CEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCH
Confidence 57999986 7777777777764 25 358888764110000 000011100 01111 11112
Q ss_pred CCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 008629 369 NNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 369 ~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 414 (559)
.++.++++..++|++|=+.+.... -+..++++|.+..-+.|||.=|
T Consensus 71 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 132 (348)
T 1ek6_A 71 GALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS 132 (348)
T ss_dssp HHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 357777776679999988875421 1345777777766567888543
No 455
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=46.02 E-value=23 Score=36.33 Aligned_cols=36 Identities=19% Similarity=0.298 Sum_probs=27.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
..+|+|+|||-+|+..|-.|.+. |- ..++.++++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-----g~-----~~~v~v~E~~~ 39 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-----FP-----DLNITLLEAGE 39 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-----CT-----TSEEEEECSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHh-----CC-----CCCEEEEECCC
Confidence 46899999999999999988764 51 13678888753
No 456
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=45.89 E-value=16 Score=39.04 Aligned_cols=33 Identities=27% Similarity=0.389 Sum_probs=26.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+..|+|+|||.+|+..|-.|.. .|+ ++.++|+.
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~-----~G~-------~V~vlEr~ 58 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAH-----RQV-------GHLVVEQT 58 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 4589999999999999988865 375 47777765
No 457
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=45.80 E-value=17 Score=38.21 Aligned_cols=34 Identities=15% Similarity=0.382 Sum_probs=26.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
..+|+|+|||.||+..|..|.+. |. ++.++++..
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~-----G~-------~V~vlE~~~ 37 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS-----GL-------NVVVLEARD 37 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 35799999999999999988763 53 566666643
No 458
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=45.73 E-value=55 Score=31.15 Aligned_cols=94 Identities=15% Similarity=0.205 Sum_probs=52.6
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc-ccCCCCCHHHHhccc
Q 008629 301 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 378 (559)
Q Consensus 301 riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~v 378 (559)
||+|.|| |-.|..+++.|++ .| .+++.+|+.. ..... .......+.. +..+.. +.++++
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~-~~~~~~~~~~~Dl~d~~-~~~~~~-- 62 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVE-----LG-------YEVVVVDNLS---SGRRE-FVNPSAELHVRDLKDYS-WGAGIK-- 62 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS---SCCGG-GSCTTSEEECCCTTSTT-TTTTCC--
T ss_pred EEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCC---CCchh-hcCCCceEEECccccHH-HHhhcC--
Confidence 7899998 8788888777765 25 3678777641 11111 1111111111 212222 555555
Q ss_pred CCcEEEeccCCCCC-C---------------CHHHHHHHHcCCCCcEEEecC
Q 008629 379 KPTILIGSSGVGRT-F---------------TKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 379 kPtvLIG~S~~~g~-F---------------t~evv~~Ma~~~erPIIFaLS 414 (559)
.|++|=+.+.... . |..+++++.+..-+.|||.=|
T Consensus 63 -~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 113 (312)
T 3ko8_A 63 -GDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASS 113 (312)
T ss_dssp -CSEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -CCEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCc
Confidence 3999988775421 1 235777777666678888655
No 459
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=45.68 E-value=18 Score=37.51 Aligned_cols=32 Identities=16% Similarity=0.333 Sum_probs=25.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.+|+|+|||.||+..|..|.+. |. ++.++++.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~-----g~-------~v~v~E~~ 71 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVA-----GF-------KTLLLEAR 71 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------CEEEEeCC
Confidence 5899999999999999888753 53 56677665
No 460
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=45.65 E-value=14 Score=38.13 Aligned_cols=35 Identities=23% Similarity=0.240 Sum_probs=27.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 345 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 345 (559)
+-+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~-----~G~-------~V~vlEk~~~ 38 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAK-----LGK-------SVTVFDNGKK 38 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 4579999999999999988765 363 6889998643
No 461
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=45.62 E-value=17 Score=35.71 Aligned_cols=37 Identities=24% Similarity=0.210 Sum_probs=26.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhh-cccEEEEcccC
Q 008629 301 RFLFLGAGEAGTGIAELIALEISKQTKAPVEET-RKKICLVDSKG 344 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA-~~~i~lvD~~G 344 (559)
.|+|+|||.+|+.+|-.|.+. |.+. . ..++.++|+.-
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-----G~~~--~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-----YHSV--LQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----HTTT--SSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHh-----cccc--CCCceEEEEECCC
Confidence 589999999999999887653 3100 0 14688999873
No 462
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=45.56 E-value=1.2e+02 Score=30.82 Aligned_cols=128 Identities=13% Similarity=0.143 Sum_probs=80.3
Q ss_pred HHhhCCCeeeeeccCCCCcHHHHHHHHcCCCCeee--cCCcchhHHHHHHHHHHHHHhCCCcc-cceEEEeCcChHHHHH
Q 008629 238 KQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLA-EHRFLFLGAGEAGTGI 314 (559)
Q Consensus 238 ~~~fGp~~lIq~EDf~~~~Af~lL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Alr~~g~~l~-d~riv~~GAGsAgiGi 314 (559)
-.+| .++++ +-.++ +.+.+.|.+|- ++||.| || .-=-.=+||=++.-.+.. ++|+ +.||+++|-|. -+
T Consensus 88 ls~~-~D~iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~-g~l~~gl~va~vGD~~---~v 158 (307)
T 3tpf_A 88 IGAM-VDFVM-MRVNK-HETLLEFARYS-KAPVINALSE-LYHPTQVLGDLFTIKEWN-KMQNGIAKVAFIGDSN---NM 158 (307)
T ss_dssp HHHH-SSEEE-EECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHTT-CCGGGCCEEEEESCSS---HH
T ss_pred HHHh-CCEEE-EecCC-hHHHHHHHHhC-CCCEEeCCCC-CcCcHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCC---cc
Confidence 3456 55543 44443 35556666665 689998 54 333445677766655544 4799 99999999974 48
Q ss_pred HHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcccc----CCCCCHHHHhcccCCcEEEecc
Q 008629 315 AELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTILIGSS 387 (559)
Q Consensus 315 a~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~----~~~~~L~e~V~~vkPtvLIG~S 387 (559)
|+-++.++.+ .|+ +|.++-.+|+.-.. .+-..-+.+|+.. ....++.|+|+. .||+.-..
T Consensus 159 a~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~g~~~~~~~d~~eav~~--aDvvyt~~ 222 (307)
T 3tpf_A 159 CNSWLITAAI-LGF-------EISIAMPKNYKISP---EIWEFAMKQALISGAKISLGYDKFEALKD--KDVVITDT 222 (307)
T ss_dssp HHHHHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHTCEEEEESCHHHHHTT--CSEEEECC
T ss_pred HHHHHHHHHH-cCC-------EEEEECCCccCCCH---HHHHHHHHHHHHcCCeEEEEcCHHHHhcC--CCEEEecC
Confidence 8888887766 475 68888888774321 1111122333321 123689999996 99998654
No 463
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=45.56 E-value=17 Score=35.18 Aligned_cols=37 Identities=24% Similarity=0.370 Sum_probs=27.9
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCc
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 345 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 345 (559)
.+..|||+|||.||+..|..+.+. .| .++.++|+..-
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~----~G-------~~V~viEk~~~ 74 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKN----PN-------VQVAIIEQSVS 74 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTS----TT-------SCEEEEESSSS
T ss_pred cccCEEEECccHHHHHHHHHHHHc----CC-------CeEEEEECCCC
Confidence 346899999999999998877541 15 36888988643
No 464
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=45.52 E-value=16 Score=38.38 Aligned_cols=36 Identities=28% Similarity=0.477 Sum_probs=27.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
.+|||+|||.||+..|..+.+.- ..| .++.++|+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~--~~G-------~~V~liE~~~ 38 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSH--PET-------TQVTVIDCDG 38 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC--TTT-------EEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--CCc-------CEEEEEeCCC
Confidence 47999999999999999887530 004 3799999874
No 465
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=45.43 E-value=17 Score=39.34 Aligned_cols=34 Identities=29% Similarity=0.483 Sum_probs=27.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
+..|||+|+|.+|+++|-.+.. .|+ ++.++|+..
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~-----rG~-------~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAA-----SGI-------KTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 4579999999999999988865 374 588998764
No 466
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=45.43 E-value=17 Score=37.11 Aligned_cols=34 Identities=24% Similarity=0.493 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
+.+|+|+|||.+|+..|..|.+ .| .++.++|+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~-----~g-------~~v~v~E~~~ 36 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE-----KG-------HQVHIIDQRD 36 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEESSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CC-------CcEEEEEecC
Confidence 4689999999999999988864 24 4688888753
No 467
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=45.43 E-value=17 Score=40.55 Aligned_cols=34 Identities=24% Similarity=0.432 Sum_probs=27.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
..+|||+|||.||+..|..+.. .|. ++.++|+..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~-----~G~-------~Vtlie~~~ 422 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLME-----SGY-------TVHLTDTAE 422 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 4689999999999999998865 353 589998853
No 468
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=45.29 E-value=21 Score=37.45 Aligned_cols=35 Identities=17% Similarity=0.309 Sum_probs=27.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
..+|+|+|+|.||+..|..+... |- ..++.++|+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~vie~~ 40 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH-----HS-----RAHVDIYEKQ 40 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CS-----SCEEEEECSS
T ss_pred CceEEEECcCHHHHHHHHHHHhc-----CC-----CCCEEEEeCC
Confidence 35899999999999999998763 41 1478899875
No 469
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=45.12 E-value=20 Score=35.82 Aligned_cols=50 Identities=16% Similarity=0.094 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 282 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 282 ~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.++..+.|++..+. -..++|+|+|||..|...+.+... .|. ++++.+|+.
T Consensus 151 ~~~ta~~al~~~~~-~~g~~VlV~GaG~vG~~a~qla~~-----~Ga------~~Vi~~~~~ 200 (352)
T 3fpc_A 151 MMTTGFHGAELANI-KLGDTVCVIGIGPVGLMSVAGANH-----LGA------GRIFAVGSR 200 (352)
T ss_dssp HHHHHHHHHHHTTC-CTTCCEEEECCSHHHHHHHHHHHT-----TTC------SSEEEECCC
T ss_pred hhHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHH-----cCC------cEEEEECCC
Confidence 34445566655443 346889999999777655544432 364 578888763
No 470
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=45.05 E-value=15 Score=34.24 Aligned_cols=37 Identities=22% Similarity=0.265 Sum_probs=24.4
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
++++.+++|.||.. ||...++..+.+ .|. +++++|++
T Consensus 3 ~~~~k~vlVtGasg---giG~~~a~~l~~-~G~-------~V~~~~r~ 39 (251)
T 1zk4_A 3 RLDGKVAIITGGTL---GIGLAIATKFVE-EGA-------KVMITGRH 39 (251)
T ss_dssp TTTTCEEEETTTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred CCCCcEEEEeCCCC---hHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 57788999999743 455555555554 363 58888764
No 471
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=45.02 E-value=44 Score=33.47 Aligned_cols=47 Identities=19% Similarity=0.171 Sum_probs=30.9
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 284 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 284 Agll~Alr~~g~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
...+.+++..+.....++++|.|||..|...+.+... .|. +++.+|+
T Consensus 166 ~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~-----~Ga-------~Vi~~~~ 212 (357)
T 2cf5_A 166 VTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKA-----MGH-------HVTVISS 212 (357)
T ss_dssp HHHHHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHHH-----HTC-------EEEEEES
T ss_pred HHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeC
Confidence 3345666655544367899999999877766655543 262 5777775
No 472
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=44.97 E-value=16 Score=38.00 Aligned_cols=34 Identities=29% Similarity=0.423 Sum_probs=27.6
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.+.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~-----~G~-------~V~liE~~ 52 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAE-----LGA-------RAAVVESH 52 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEecC
Confidence 35689999999999999988865 363 68899965
No 473
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=44.96 E-value=9.7 Score=39.35 Aligned_cols=34 Identities=38% Similarity=0.446 Sum_probs=26.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
+-+|+|+|||.||+..|-.|.+ .|+ ++.++|++-
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~-----~G~-------~V~vlE~~~ 39 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSR-----RGL-------KILLVDSKP 39 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSS-----SSC-------CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 3579999999999999887754 364 577777654
No 474
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=44.86 E-value=36 Score=32.63 Aligned_cols=92 Identities=16% Similarity=0.164 Sum_probs=48.5
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcc
Q 008629 299 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 377 (559)
Q Consensus 299 d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 377 (559)
..+|+|.|| |-.|-.+++.|++ .| -+++.+|+. +.. . . .+.-+..+..++.++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~~--~--~-~~~~Dl~d~~~~~~~~~~ 58 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQ-----NN-------WHAVGCGFR------RAR--P--K-FEQVNLLDSNAVHHIIHD 58 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEC-----------------------------CHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHh-----CC-------CeEEEEccC------CCC--C--C-eEEecCCCHHHHHHHHHh
Confidence 358999998 7777777777654 25 357777753 111 0 1 111122223467788887
Q ss_pred cCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 008629 378 IKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 414 (559)
Q Consensus 378 vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 414 (559)
+++|++|=+.+.... -+..+++++.+..- .|||.=|
T Consensus 59 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 110 (315)
T 2ydy_A 59 FQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISS 110 (315)
T ss_dssp HCCSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred hCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 789999988765421 03456776665443 6777544
No 475
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=44.85 E-value=22 Score=37.36 Aligned_cols=32 Identities=25% Similarity=0.377 Sum_probs=26.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 341 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD 341 (559)
+.+++|+|||.||+..|..+.+. .| .++.++|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASL----HK-------KRVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHH----cC-------CEEEEEe
Confidence 45899999999999999988761 15 3689999
No 476
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=44.83 E-value=17 Score=37.68 Aligned_cols=33 Identities=24% Similarity=0.266 Sum_probs=26.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
..|+|+|||.||+..|-.+.+ .|+ ++.++|+..
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~-----~G~-------~V~llEk~~ 59 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAE-----EGA-------NVLLLDKGN 59 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 579999999999999887764 363 689999864
No 477
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=44.83 E-value=14 Score=39.80 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+--|||+|+|.+|+++|..+.. .|+ ++.++++.
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~-----~G~-------~V~LlEk~ 50 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQV-----RGI-------QTGLVEMN 50 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEECC
Confidence 4579999999999999988764 375 58888886
No 478
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=44.62 E-value=24 Score=34.37 Aligned_cols=80 Identities=11% Similarity=0.172 Sum_probs=44.1
Q ss_pred CCcccceEEEeCcCh---HHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchh-----hc-ccc
Q 008629 295 GTLAEHRFLFLGAGE---AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-----WA-HEH 365 (559)
Q Consensus 295 ~~l~d~riv~~GAGs---AgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~-----fA-~~~ 365 (559)
.+|++.++||.||++ .|..||+.+++ .|. +++++|++. ...+.+...... +. -|.
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~-----~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dv 89 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCA-----QGA-------EVALTYLSE----TFKKRVDPLAESLGVKLTVPCDV 89 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESSG----GGHHHHHHHHHHHTCCEEEECCT
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHH-----CCC-------EEEEEeCCh----HHHHHHHHHHHhcCCeEEEEcCC
Confidence 468889999999963 34446666654 363 588888751 110111111111 11 121
Q ss_pred CCCCCHHHHhccc-----CCcEEEeccCCC
Q 008629 366 EPVNNLLDAVKVI-----KPTILIGSSGVG 390 (559)
Q Consensus 366 ~~~~~L~e~V~~v-----kPtvLIG~S~~~ 390 (559)
.+..++.++++.+ +.|+||=..+..
T Consensus 90 ~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 119 (296)
T 3k31_A 90 SDAESVDNMFKVLAEEWGSLDFVVHAVAFS 119 (296)
T ss_dssp TCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 2223455666655 799999877654
No 479
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=44.33 E-value=28 Score=34.55 Aligned_cols=90 Identities=16% Similarity=0.134 Sum_probs=50.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 379 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 379 (559)
.||.|+|+|..|...++.+.. ..+. +-+.++|++ .+ ......+.|- .....++.|+++.-+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~----~~~~------~l~av~d~~----~~---~~~~~a~~~g--~~~~~~~~~~l~~~~ 65 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAA----NPDL------ELVVIADPF----IE---GAQRLAEANG--AEAVASPDEVFARDD 65 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHH----CTTE------EEEEEECSS----HH---HHHHHHHTTT--CEEESSHHHHTTCSC
T ss_pred eEEEEECCcHHHHHHHHHHHh----CCCc------EEEEEECCC----HH---HHHHHHHHcC--CceeCCHHHHhcCCC
Confidence 589999999988776665543 1121 223356653 11 1222222221 112368999999777
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 008629 380 PTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 411 (559)
Q Consensus 380 PtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 411 (559)
+|+++ +++.+ ....++++...+.. ++|+.
T Consensus 66 ~D~V~-i~tp~-~~h~~~~~~al~~g-k~v~~ 94 (344)
T 3euw_A 66 IDGIV-IGSPT-STHVDLITRAVERG-IPALC 94 (344)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHTT-CCEEE
T ss_pred CCEEE-EeCCc-hhhHHHHHHHHHcC-CcEEE
Confidence 99888 44444 45556555544333 55553
No 480
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=44.20 E-value=18 Score=36.78 Aligned_cols=35 Identities=14% Similarity=0.361 Sum_probs=27.1
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
.+.+|+|+|||.||+..|..|.+. |. ++.++++..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~-----g~-------~v~v~E~~~ 38 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA-----GL-------SVAVIEARD 38 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEECCC
Confidence 356899999999999999888753 53 477777753
No 481
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=44.11 E-value=41 Score=33.51 Aligned_cols=126 Identities=12% Similarity=0.045 Sum_probs=71.7
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcc
Q 008629 299 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 377 (559)
Q Consensus 299 d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 377 (559)
+.||+++|| |.-|--+++.+.+. |. +-++.++.+.- +. + . ...+-..++.|+.+.
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~-----g~------~~v~~VnP~~~---g~-~-i--------~G~~vy~sl~el~~~ 62 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTY-----GT------KIVAGVTPGKG---GM-E-V--------LGVPVYDTVKEAVAH 62 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-----TC------EEEEEECTTCT---TC-E-E--------TTEEEESSHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHc-----CC------eEEEEECCCCC---Cc-e-E--------CCEEeeCCHHHHhhc
Confidence 478999999 98887777765442 64 35667776531 10 0 0 011112578898885
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHcCCCC-cEEEecCCCCCCCCCCHHHHhcc--cCCcEEEeeCCCCCCceeCCeeeC
Q 008629 378 IKPTILIGSSGVGRTFTKEVIEAMASFNEK-PLILALSNPTSQSECTAEEAYTW--SKGRAIFASGSPFDPFEYNGKVFV 454 (559)
Q Consensus 378 vkPtvLIG~S~~~g~Ft~evv~~Ma~~~er-PIIFaLSNPt~~~EctpedA~~w--t~G~aifAsGSPF~pv~~~G~~~~ 454 (559)
.+||+.| ....+ .+..+++++..+..-+ -|||+--= +|..-+++.+. ..|-.+++--+| -.+.
T Consensus 63 ~~~Dv~I-i~vp~-~~~~~~~~ea~~~Gi~~vVi~t~G~----~~~~~~~l~~~a~~~gi~vigPNc~--------Gii~ 128 (288)
T 1oi7_A 63 HEVDASI-IFVPA-PAAADAALEAAHAGIPLIVLITEGI----PTLDMVRAVEEIKALGSRLIGGNCP--------GIIS 128 (288)
T ss_dssp SCCSEEE-ECCCH-HHHHHHHHHHHHTTCSEEEECCSCC----CHHHHHHHHHHHHHHTCEEEESSSC--------EEEE
T ss_pred CCCCEEE-EecCH-HHHHHHHHHHHHCCCCEEEEECCCC----CHHHHHHHHHHHHHcCCEEEeCCCC--------eEEc
Confidence 5799988 44433 5788999988776655 34554211 22112233332 235456655444 3455
Q ss_pred ccCccccc
Q 008629 455 PGQANNAY 462 (559)
Q Consensus 455 p~Q~NN~y 462 (559)
|+++.|..
T Consensus 129 ~~~~~~~~ 136 (288)
T 1oi7_A 129 AEETKIGI 136 (288)
T ss_dssp TTTEEEES
T ss_pred CCCceeEE
Confidence 67666655
No 482
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=44.05 E-value=72 Score=30.01 Aligned_cols=77 Identities=16% Similarity=0.146 Sum_probs=41.8
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHH
Q 008629 295 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 374 (559)
Q Consensus 295 ~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 374 (559)
..+++.++||.||++ ||...++..+.+ .|. +++++|++. ...+.+. ...+.-|. ..++.++
T Consensus 15 ~~~~~k~vlVTGas~---gIG~~~a~~l~~-~G~-------~V~~~~r~~----~~~~~~~--~~~~~~D~--~~~~~~~ 75 (249)
T 1o5i_A 15 LGIRDKGVLVLAASR---GIGRAVADVLSQ-EGA-------EVTICARNE----ELLKRSG--HRYVVCDL--RKDLDLL 75 (249)
T ss_dssp -CCTTCEEEEESCSS---HHHHHHHHHHHH-TTC-------EEEEEESCH----HHHHHTC--SEEEECCT--TTCHHHH
T ss_pred hccCCCEEEEECCCC---HHHHHHHHHHHH-CCC-------EEEEEcCCH----HHHHhhC--CeEEEeeH--HHHHHHH
Confidence 457889999999853 344444444444 363 588888753 0000011 11111121 2356666
Q ss_pred hccc-CCcEEEeccCCC
Q 008629 375 VKVI-KPTILIGSSGVG 390 (559)
Q Consensus 375 V~~v-kPtvLIG~S~~~ 390 (559)
++.+ ++|+||=..+..
T Consensus 76 ~~~~~~iD~lv~~Ag~~ 92 (249)
T 1o5i_A 76 FEKVKEVDILVLNAGGP 92 (249)
T ss_dssp HHHSCCCSEEEECCCCC
T ss_pred HHHhcCCCEEEECCCCC
Confidence 6655 799999877653
No 483
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=43.95 E-value=16 Score=36.44 Aligned_cols=93 Identities=12% Similarity=0.064 Sum_probs=50.4
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcc
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 377 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 377 (559)
+..||.|+|+|..|...++.+... .+. +-+.++|++ . +......+.|-- ..-..++.|+++.
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~----~~~------~l~av~d~~----~---~~~~~~~~~~~~-~~~~~~~~~ll~~ 65 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRES----AQA------EVRGIASRR----L---ENAQKMAKELAI-PVAYGSYEELCKD 65 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHS----SSE------EEEEEBCSS----S---HHHHHHHHHTTC-CCCBSSHHHHHHC
T ss_pred CeEEEEEECchHHHHHHHHHHHhC----CCc------EEEEEEeCC----H---HHHHHHHHHcCC-CceeCCHHHHhcC
Confidence 457999999999887766555331 121 223355553 1 112222222210 1224689999987
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 008629 378 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 411 (559)
Q Consensus 378 vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 411 (559)
-++|+++ +++.+ ....++++...+. .++|+.
T Consensus 66 ~~~D~V~-i~tp~-~~h~~~~~~al~~-gk~vl~ 96 (330)
T 3e9m_A 66 ETIDIIY-IPTYN-QGHYSAAKLALSQ-GKPVLL 96 (330)
T ss_dssp TTCSEEE-ECCCG-GGHHHHHHHHHHT-TCCEEE
T ss_pred CCCCEEE-EcCCC-HHHHHHHHHHHHC-CCeEEE
Confidence 7799888 55544 3555555544332 355554
No 484
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=43.73 E-value=17 Score=42.46 Aligned_cols=34 Identities=24% Similarity=0.382 Sum_probs=28.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
..+|+|+|+|.||+..|..|.+ .|. +++.++|++
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~-----~G~------~~Vtv~E~~ 220 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLAR-----LGY------SDITIFEKQ 220 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESS
T ss_pred CCEEEEECccHHHHHHHHHHHh-----cCC------CcEEEEeCC
Confidence 5689999999999999999875 364 268899886
No 485
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=43.70 E-value=34 Score=32.29 Aligned_cols=79 Identities=16% Similarity=0.275 Sum_probs=40.7
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCc-hhchhhcc-ccCCCCCHHH
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAH-EHEPVNNLLD 373 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~-~~k~~fA~-~~~~~~~L~e 373 (559)
+|++.+++|.||++ ||...++..+.+ .|. +++++|++- ++ +.+. .....+.. |..+..++.+
T Consensus 3 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G~-------~V~~~~r~~----~~-~~~~~~~~~~~~~~D~~~~~~~~~ 66 (256)
T 2d1y_A 3 LFAGKGVLVTGGAR---GIGRAIAQAFAR-EGA-------LVALCDLRP----EG-KEVAEAIGGAFFQVDLEDERERVR 66 (256)
T ss_dssp TTTTCEEEEETTTS---HHHHHHHHHHHH-TTC-------EEEEEESST----TH-HHHHHHHTCEEEECCTTCHHHHHH
T ss_pred CCCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCCh----hH-HHHHHHhhCCEEEeeCCCHHHHHH
Confidence 46778899999753 444445555544 363 588887641 11 1010 00001111 2122234555
Q ss_pred Hhccc-----CCcEEEeccCCC
Q 008629 374 AVKVI-----KPTILIGSSGVG 390 (559)
Q Consensus 374 ~V~~v-----kPtvLIG~S~~~ 390 (559)
+++.+ ++|+||=..+..
T Consensus 67 ~~~~~~~~~g~iD~lv~~Ag~~ 88 (256)
T 2d1y_A 67 FVEEAAYALGRVDVLVNNAAIA 88 (256)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 56544 799999777653
No 486
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=43.62 E-value=35 Score=33.63 Aligned_cols=50 Identities=14% Similarity=-0.055 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 282 VLAGVVAALKLIGGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 282 ~LAgll~Alr~~g~~l~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
.++..+.+++..+.--..++++|.|| |..|..+++++.. .|. +++.+|+.
T Consensus 129 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G~-------~Vi~~~~~ 179 (333)
T 1wly_A 129 KGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARH-----LGA-------TVIGTVST 179 (333)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred hHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 34444555553344445789999996 8888888777654 362 57877764
No 487
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=43.56 E-value=14 Score=36.24 Aligned_cols=33 Identities=21% Similarity=0.531 Sum_probs=26.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccC
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 344 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 344 (559)
...|+|+|||.+|+.+|-.|. . |. ++.++|+..
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~-----G~-------~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-A-----HG-------RVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-T-----TS-------CEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-C-----CC-------CEEEEECCC
Confidence 568999999999999998875 1 53 688999873
No 488
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=43.03 E-value=20 Score=36.04 Aligned_cols=35 Identities=17% Similarity=0.347 Sum_probs=26.7
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 298 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 298 ~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
++.+|+|+|||.||+..|-.|.+. |. .++.++++.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~-----g~------~~v~v~E~~ 39 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA-----GF------HDYTILERT 39 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEECSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-----CC------CcEEEEECC
Confidence 456899999999999999888652 51 357777764
No 489
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=42.97 E-value=2.7e+02 Score=27.96 Aligned_cols=127 Identities=17% Similarity=0.153 Sum_probs=83.3
Q ss_pred HHHhhCCCeeeeeccCCCCcHHHHHHHHcCCCCeee--cCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCc--ChHHH
Q 008629 237 VKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGA--GEAGT 312 (559)
Q Consensus 237 v~~~fGp~~lIq~EDf~~~~Af~lL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GA--GsAgi 312 (559)
+-.+||.++++ +-.++...+..+|.+|- ++||.| |-..-=-.=+||=++.-.+..| +|++.||.++|- |+
T Consensus 85 vls~~~~D~iv-iR~~~~~~~~~~la~~~-~vPVINAG~g~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGDl~~~--- 158 (291)
T 3d6n_B 85 TFEGLGFDYVV-FRVPFVFFPYKEIVKSL-NLRLVNAGDGTHQHPSQGLIDFFTIKEHFG-EVKDLRVLYVGDIKHS--- 158 (291)
T ss_dssp HHHHTTCSEEE-EEESSCCCSCHHHHHTC-SSEEEEEEETTTBCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCTTC---
T ss_pred HHHHhcCCEEE-EEcCChHHHHHHHHHhC-CCCEEeCccCCCcCcHHHHHHHHHHHHHhC-CcCCcEEEEECCCCCC---
Confidence 44668656644 55565555544377774 699999 3333334456777776666554 799999999998 63
Q ss_pred HHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccCC
Q 008629 313 GIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGV 389 (559)
Q Consensus 313 Gia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~ 389 (559)
-+|+-++.++.+ .|+ +|.++-.+|+.-+. +.... ..-..++.|+|+. .||+.-+-.+
T Consensus 159 rva~Sl~~~~~~-~g~-------~v~~~~P~~~~p~~----~~~~g------~~~~~d~~eav~~--aDvvy~~~~q 215 (291)
T 3d6n_B 159 RVFRSGAPLLNM-FGA-------KIGVCGPKTLIPRD----VEVFK------VDVFDDVDKGIDW--ADVVIWLRLQ 215 (291)
T ss_dssp HHHHHHHHHHHH-TTC-------EEEEESCGGGSCTT----GGGGC------EEEESSHHHHHHH--CSEEEECCCC
T ss_pred chHHHHHHHHHH-CCC-------EEEEECCchhCCch----HHHCC------CEEEcCHHHHhCC--CCEEEEeCcc
Confidence 477777777766 475 69999999884321 22111 1113689999997 9999985443
No 490
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=42.95 E-value=40 Score=33.93 Aligned_cols=37 Identities=16% Similarity=0.152 Sum_probs=25.0
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 295 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 295 ~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
..-..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 228 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKI-----AGA------SRIIAIDI 228 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 33356899999999777666554432 364 46888775
No 491
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=42.93 E-value=22 Score=37.66 Aligned_cols=26 Identities=23% Similarity=0.409 Sum_probs=23.4
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHH
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALE 321 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~ 321 (559)
+|+++++||+|+|..|..-+++|+.+
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~ 34 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEA 34 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHT
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhC
Confidence 57889999999999999999999874
No 492
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=42.87 E-value=55 Score=31.55 Aligned_cols=78 Identities=22% Similarity=0.298 Sum_probs=43.8
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcccCccccCCcCCCchhchhhcc----------c
Q 008629 295 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----------E 364 (559)
Q Consensus 295 ~~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~----------~ 364 (559)
.+|++.++||-||++ ||..-++..+.+ .|. +++++|++ . +.+......+.. |
T Consensus 28 ~~l~gk~~lVTGas~---GIG~aia~~la~-~G~-------~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~~~~D 89 (276)
T 3r1i_A 28 FDLSGKRALITGAST---GIGKKVALAYAE-AGA-------QVAVAARH----S---DALQVVADEIAGVGGKALPIRCD 89 (276)
T ss_dssp GCCTTCEEEEESTTS---HHHHHHHHHHHH-TTC-------EEEEEESS----G---GGGHHHHHHHHHTTCCCEEEECC
T ss_pred cCCCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCC----H---HHHHHHHHHHHhcCCeEEEEEcC
Confidence 357889999999754 344445555544 363 58888874 1 123322222211 1
Q ss_pred cCCCCCHHHHhccc-----CCcEEEeccCCC
Q 008629 365 HEPVNNLLDAVKVI-----KPTILIGSSGVG 390 (559)
Q Consensus 365 ~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 390 (559)
..+..++.++++.+ ++|+||=..+..
T Consensus 90 l~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 120 (276)
T 3r1i_A 90 VTQPDQVRGMLDQMTGELGGIDIAVCNAGIV 120 (276)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 11123455666655 799999777654
No 493
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=42.80 E-value=25 Score=36.40 Aligned_cols=33 Identities=21% Similarity=0.388 Sum_probs=26.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
..+|+|+|||.+|+..|..|.+. |. ++.++++.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~-----g~-------~v~vlE~~ 65 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGA-----GH-------QVTVLEAS 65 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHH-----TC-------EEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 46899999999999999988763 53 46666664
No 494
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=42.75 E-value=3.4 Score=40.28 Aligned_cols=20 Identities=20% Similarity=0.203 Sum_probs=16.8
Q ss_pred eEEEeCcChHHHHHHHHHHH
Q 008629 301 RFLFLGAGEAGTGIAELIAL 320 (559)
Q Consensus 301 riv~~GAGsAgiGia~ll~~ 320 (559)
||.|+|+|..|.++|..+..
T Consensus 4 ~I~iIG~G~mG~~la~~l~~ 23 (276)
T 2i76_A 4 VLNFVGTGTLTRFFLECLKD 23 (276)
T ss_dssp CCEEESCCHHHHHHHHTTC-
T ss_pred eEEEEeCCHHHHHHHHHHHH
Confidence 79999999999998877654
No 495
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=42.73 E-value=47 Score=31.63 Aligned_cols=37 Identities=19% Similarity=0.222 Sum_probs=23.3
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
++++.++||.||+. ||...|+..+.+ .|. +++++|++
T Consensus 29 ~l~~k~vlVTGasg---gIG~~la~~l~~-~G~-------~V~~~~r~ 65 (279)
T 1xg5_A 29 RWRDRLALVTGASG---GIGAAVARALVQ-QGL-------KVVGCART 65 (279)
T ss_dssp GGTTCEEEEESTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred ccCCCEEEEECCCc---hHHHHHHHHHHH-CCC-------EEEEEECC
Confidence 36778899998743 444455555544 363 58888764
No 496
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=42.66 E-value=20 Score=35.09 Aligned_cols=98 Identities=18% Similarity=0.169 Sum_probs=56.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc--CccccCCcCCCchhchhhccccCCCCCHHHHh-c
Q 008629 300 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK--GLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV-K 376 (559)
Q Consensus 300 ~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~--GLi~~~R~~~l~~~k~~fA~~~~~~~~L~e~V-~ 376 (559)
.||.|+|+|+-|..+|..|... | .+++++|+. ++-.... .. ..+. . -..+..+++ +
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~-----g-------~~V~~~~r~~~~~~~~~~-~g----~~~~--~--~~~~~~~~~~~ 61 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS-----L-------PHTTLIGRHAKTITYYTV-PH----APAQ--D--IVVKGYEDVTN 61 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----C-------TTCEEEESSCEEEEEESS-TT----SCCE--E--EEEEEGGGCCS
T ss_pred cEEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEEeccCcEEEEec-CC----eecc--c--eecCchHhcCC
Confidence 4899999999999999888764 5 257777764 1111000 00 0000 0 001223333 2
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEecCCCCCCCCC
Q 008629 377 VIKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPTSQSEC 422 (559)
Q Consensus 377 ~vkPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt~~~Ec 422 (559)
.+|++| ++..+ ..++++++.++.+ .+..+|..+.|--...|.
T Consensus 62 --~~D~vi-lavk~-~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~ 104 (294)
T 3g17_A 62 --TFDVII-IAVKT-HQLDAVIPHLTYLAHEDTLIILAQNGYGQLEH 104 (294)
T ss_dssp --CEEEEE-ECSCG-GGHHHHGGGHHHHEEEEEEEEECCSSCCCGGG
T ss_pred --CCCEEE-EeCCc-cCHHHHHHHHHHhhCCCCEEEEeccCcccHhh
Confidence 367766 44433 3578888888753 345688889998765443
No 497
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=42.34 E-value=47 Score=32.70 Aligned_cols=51 Identities=16% Similarity=0.203 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHhCCCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 280 SVVLAGVVAALKLIGGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 280 aV~LAgll~Alr~~g~~l~d~riv~~GA-GsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
.+.++..+.|+...+.--..++++|.|| |..|..++.++.. .|. +++.+|+
T Consensus 131 ~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~-----~Ga-------~Vi~~~~ 182 (336)
T 4b7c_A 131 GMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARL-----KGC-------RVVGIAG 182 (336)
T ss_dssp SHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred ccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 3455556667744444456789999999 8888777666543 363 5777765
No 498
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=42.20 E-value=41 Score=33.78 Aligned_cols=36 Identities=19% Similarity=0.156 Sum_probs=24.6
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEcc
Q 008629 296 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 342 (559)
Q Consensus 296 ~l~d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~ 342 (559)
--..++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~-----~Ga------~~Vi~~~~ 224 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKA-----AGA------ARIIGVDI 224 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 3356899999998777666555433 364 46887775
No 499
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=42.20 E-value=19 Score=37.32 Aligned_cols=33 Identities=18% Similarity=0.376 Sum_probs=26.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcccEEEEccc
Q 008629 299 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 343 (559)
Q Consensus 299 d~riv~~GAGsAgiGia~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 343 (559)
+-.|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~-----~G~-------~V~liEk~ 37 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAA-----LGK-------KVAIAEEF 37 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 3579999999999999988764 363 68899984
No 500
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=42.18 E-value=2e+02 Score=29.26 Aligned_cols=129 Identities=13% Similarity=0.172 Sum_probs=81.5
Q ss_pred HHhhCCCeeeeeccCCCCcHHHHHHHHcCCCCeee--cCCcchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHH
Q 008629 238 KQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIA 315 (559)
Q Consensus 238 ~~~fGp~~lIq~EDf~~~~Af~lL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Alr~~g~~l~d~riv~~GAGsAgiGia 315 (559)
-.+| .++ |-+-.++. .+.+.|.+|-.++||.| |...-=-.=+||=++.-.+..| +|++.||+++|-|.=+ -+|
T Consensus 95 ls~~-~D~-iviR~~~~-~~~~~la~~~~~vPVINag~G~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~~~-rva 169 (310)
T 3csu_A 95 ISTY-VDA-IVMRHPQE-GAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQG-RLDNLHVAMVGDLKYG-RTV 169 (310)
T ss_dssp HTTT-CSE-EEEEESST-THHHHHHHHCTTCCEEEEEETTSCCHHHHHHHHHHHHHHHS-CSSSCEEEEESCTTTC-HHH
T ss_pred HHHh-CCE-EEEECCCh-hHHHHHHHhcCCCCEEcCccCCCCCchHHHHHHHHHHHHhC-CcCCcEEEEECCCCCC-chH
Confidence 4567 555 33555544 55667788865799999 4122223445677776655554 7999999999987421 367
Q ss_pred HHHHHHHHHhc-CCChhhhcccEEEEcccCccccCCcCCCchhchhhcccc----CCCCCHHHHhcccCCcEEEeccC
Q 008629 316 ELIALEISKQT-KAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTILIGSSG 388 (559)
Q Consensus 316 ~ll~~~~~~~~-G~s~eeA~~~i~lvD~~GLi~~~R~~~l~~~k~~fA~~~----~~~~~L~e~V~~vkPtvLIG~S~ 388 (559)
+-++.++.+ . |+ +|.++-.+|+--. +.-..+++.. ....++.|+|+. .||+.-..-
T Consensus 170 ~Sl~~~~~~-~~g~-------~v~~~~P~~~~~~-------~~~~~~~~~~g~~~~~~~d~~eav~~--aDvvyt~~~ 230 (310)
T 3csu_A 170 HSLTQALAK-FDGN-------RFYFIAPDALAMP-------QYILDMLDEKGIAWSLHSSIEEVMAE--VDILYMTRV 230 (310)
T ss_dssp HHHHHHHHT-SSSC-------EEEEECCGGGCCC-------HHHHHHHHHTTCCEEECSCGGGTTTT--CSEEEECC-
T ss_pred HHHHHHHHh-CCCC-------EEEEECCcccccC-------HHHHHHHHHcCCeEEEEcCHHHHhcC--CCEEEECCc
Confidence 777777765 4 75 6888888887332 1112233321 123589999996 999997654
Done!