BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008633
(558 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147865347|emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]
Length = 561
Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/558 (65%), Positives = 431/558 (77%), Gaps = 4/558 (0%)
Query: 2 AFLSRFYRTRYPLSSLSSSFSLFSFST-SVRSNLSYNELLSNQKKNMSSLDEHHVLKELS 60
FLSRF RTRY L SS SLF FST V SN +E NQ K S+ +E VL +LS
Sbjct: 7 GFLSRFSRTRYHTRYLPSSVSLFQFSTLQVTSNPLMDEPTDNQIKRPSNFNERDVLYQLS 66
Query: 61 DLFQISSHNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDAL 120
L I + S + E NS K +RAVD FL P E+LRGVF+Q+L+GK IE AL
Sbjct: 67 GLLPICCNTSISKPFTE---NSPKEQLKTRAVDGFLSPGEKLRGVFIQRLRGKAAIELAL 123
Query: 121 WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFD 180
NV +DL++D+V +V NRGNL GEAMV FFNWA+K P + KDV +YNVI+KALGRRKF +
Sbjct: 124 TNVGIDLTIDIVSEVXNRGNLGGEAMVXFFNWAVKQPTIPKDVDTYNVIIKALGRRKFIE 183
Query: 181 FMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVL 240
F VL DM +G++P+ ETLSIVMDSFI+A QV KAI+M LE+FG K D ESLNV+L
Sbjct: 184 FXVXVLKDMHIQGISPNYETLSIVMDSFIKARQVSKAIEMFRNLEEFGGKCDTESLNVLL 243
Query: 241 WCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
CLCQR HVGAA+ FN+MKG + FN MTYNI+I GWSK G++ EMER LK +VA+GFSP
Sbjct: 244 QCLCQRSHVGAANLFFNAMKGGIPFNCMTYNIIIGGWSKYGKIGEMERCLKAMVADGFSP 303
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
+ LTFS LIEGLGRAGRIDDA+EVF M+E GC P+ YNA+ISN+IS DFDEC+KYY
Sbjct: 304 NCLTFSHLIEGLGRAGRIDDAVEVFHHMEETGCVPNACVYNALISNFISTRDFDECLKYY 363
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
M S NC+PNMDTYT+LI LK+RKVADALE+ +EM+ RG++P+TG ITSF+EPLC Y
Sbjct: 364 NFMVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMVGRGMIPTTGAITSFIEPLCQY 423
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
GPPHAAMM+YKKARKVGC++SL+AYKLLL RLS FGKCGMLL+LW EMQESGY SD E+Y
Sbjct: 424 GPPHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKCGMLLNLWDEMQESGYSSDTEVY 483
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
EYVI GLCNIGQL+ AVLVMEESL KGFCPSRL+ SKL+NKLLASNK+E AY LF KIK
Sbjct: 484 EYVINGLCNIGQLDTAVLVMEESLXKGFCPSRLIRSKLNNKLLASNKVEMAYKLFLKIKX 543
Query: 541 ARQNDYARRLWRSKGWHF 558
ARQND ARR WR GWHF
Sbjct: 544 ARQNDNARRFWRGNGWHF 561
>gi|297745567|emb|CBI40732.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/522 (66%), Positives = 414/522 (79%), Gaps = 3/522 (0%)
Query: 37 NELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVDEFL 96
+E NQ K S+ +E VL +LS L I + S + E NS K +RAVD FL
Sbjct: 2 DEPTDNQIKRPSNFNERDVLYQLSGLLPICCNTSISKPFTE---NSPKEQLKTRAVDGFL 58
Query: 97 LPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKH 156
P E+LRGVF+Q+L+GK IE AL NV +DL++D+V +V+NRGNL GEAMV+FFNWA+K
Sbjct: 59 SPGEKLRGVFIQRLRGKAAIELALTNVGIDLTIDIVSEVINRGNLGGEAMVIFFNWAVKQ 118
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
P + KDV +YNVI+KALGRRKF +F+ VL DM +G++P+ ETLSIVMDSFI+A QV K
Sbjct: 119 PTIPKDVDTYNVIIKALGRRKFIEFVVKVLKDMHIQGISPNYETLSIVMDSFIKARQVSK 178
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISG 276
AI+M LE+FG K D ESLNV+L CLCQR HVGAA+ FN+MKG + FN MTYNI+I G
Sbjct: 179 AIEMFRNLEEFGGKCDTESLNVLLQCLCQRSHVGAANLFFNAMKGGIPFNCMTYNIIIGG 238
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
WSK G++ EMER LK +VA+GFSP+ LTFS LIEGLGRAGRIDDA+EVF M+E GC P+
Sbjct: 239 WSKYGKIGEMERCLKAMVADGFSPNCLTFSHLIEGLGRAGRIDDAVEVFHHMEETGCVPN 298
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YNA+ISN+IS DFDEC+KYY M S NC+PNMDTYT+LI LK+RKVADALE+ +
Sbjct: 299 ACVYNALISNFISTRDFDECLKYYNFMVSSNCDPNMDTYTKLIVAFLKARKVADALEMLD 358
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
EM+ RG++P+TG ITSF+EPLC YGPPHAAMM+YKKARKVGC++SL+AYKLLL RLS FG
Sbjct: 359 EMVGRGMIPTTGAITSFIEPLCQYGPPHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFG 418
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
KCGMLL+LW EMQESGY SD E+YEYVI GLCNIGQL+ AVLVMEESL KGFCPSRL+ S
Sbjct: 419 KCGMLLNLWDEMQESGYSSDTEVYEYVINGLCNIGQLDTAVLVMEESLHKGFCPSRLIRS 478
Query: 517 KLSNKLLASNKLESAYNLFRKIKIARQNDYARRLWRSKGWHF 558
KL+NKLLASNK+E AY LF KIKIARQND ARR WR GWHF
Sbjct: 479 KLNNKLLASNKVEMAYKLFLKIKIARQNDNARRFWRGNGWHF 520
>gi|224085974|ref|XP_002307761.1| predicted protein [Populus trichocarpa]
gi|222857210|gb|EEE94757.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/557 (62%), Positives = 434/557 (77%), Gaps = 18/557 (3%)
Query: 4 LSRFYRTRYPLSSLSSSFSLFSFSTSVRS-NLSYNELLSNQKKNMSSLDEHHVLKELSDL 62
L R+ P S+L F+TS + L YN L E +VL ELS+L
Sbjct: 23 LPHLLRSSIPFSTLDPP----QFATSQDNIKLQYN------------LGEDYVLNELSNL 66
Query: 63 FQISSHNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWN 122
IS P+ Y RS S K+++ D FL PEE+LRGVF+QK+KGK IE AL
Sbjct: 67 LPISPKPPIPHPYNHDRSISNKQVEIRPVFDRFLSPEEKLRGVFVQKIKGKSGIERALTE 126
Query: 123 VNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFM 182
+VDLSLDVV +V+NRGNL GEAM++FFNWAIK P ++KDV SYNV+++ALGRRKF DFM
Sbjct: 127 CSVDLSLDVVAEVLNRGNLGGEAMIMFFNWAIKQPMISKDVDSYNVVIRALGRRKFIDFM 186
Query: 183 CNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED-FGLKFDAESLNVVLW 241
L ++ EGV+ + ET SIV+DS +RA +VYKAIQM G LE+ FG + DAESLNV+L
Sbjct: 187 VKFLHELRVEGVSMNSETFSIVIDSLVRARRVYKAIQMFGNLEEEFGFERDAESLNVLLQ 246
Query: 242 CLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
CLC+R HVGAA+S FNS+KGK+ FN MTYN++I GWSK G+V EM+RV +E+ +GFSPD
Sbjct: 247 CLCRRSHVGAANSYFNSVKGKIPFNCMTYNVIIGGWSKFGRVSEMQRVFEEMEEDGFSPD 306
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
L+FS+L+EGLGRAG+I+DA+ +F +M+EKGC PDTN YNA+ISN+ISVG+FDECMKYY+
Sbjct: 307 CLSFSYLLEGLGRAGKIEDAVMIFGSMEEKGCVPDTNVYNAMISNFISVGNFDECMKYYR 366
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
+ S NC+PN+DTYTR+ISGL+K+ KVADALE+F+EMLDRG+V TGT+TSF+EPLCS+G
Sbjct: 367 CLLSKNCDPNIDTYTRMISGLIKASKVADALEMFDEMLDRGMVTKTGTVTSFIEPLCSFG 426
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
PPHAAM++Y KARKVGCK+SL+AYKLLL RLS FGKCGM+L +W EMQESGY SD E+YE
Sbjct: 427 PPHAAMVIYTKARKVGCKISLSAYKLLLMRLSRFGKCGMMLKIWDEMQESGYSSDMEVYE 486
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
Y+I+GLCNIGQ ENAVLVMEES+RKGFCPSR + SKL+NKLLASNK+E AY LF KIK A
Sbjct: 487 YLISGLCNIGQFENAVLVMEESMRKGFCPSRFICSKLNNKLLASNKVERAYRLFLKIKHA 546
Query: 542 RQNDYARRLWRSKGWHF 558
R ++ ARR WRS GWHF
Sbjct: 547 RHSENARRCWRSNGWHF 563
>gi|240256396|ref|NP_199195.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635652|sp|P0C8R0.1|PP416_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g43820
gi|332007631|gb|AED95014.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 546
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/525 (59%), Positives = 401/525 (76%), Gaps = 9/525 (1%)
Query: 36 YNELL--SNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVD 93
YN L +++ N +DE +VL ELS L ISS+ + + S N V A+D
Sbjct: 29 YNRTLCTASESLNHGVVDESYVLAELSSLLPISSNKTSVSKEDSSSKNQV-------AID 81
Query: 94 EFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWA 153
FL E++LRGVFLQKLKGK I+ +L ++ + LS+D+V V+NRGNLSGEAMV FF+WA
Sbjct: 82 SFLSAEDKLRGVFLQKLKGKSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWA 141
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ P V KDV SY+VI++ALGRRK F FM +VL M EGVNPDLE L+I MDSF+R
Sbjct: 142 VREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHY 201
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
V +AI++ E FG+K ES N +L CLC+R HV AA S+FN+ KG + F+ +YNI+
Sbjct: 202 VRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIM 261
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
ISGWSKLG+V EME+VLKE+V GF PD L++S LIEGLGR GRI+D++E+FD +K KG
Sbjct: 262 ISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGN 321
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
PD N YNA+I N+IS DFDE M+YY+ M CEPN++TY++L+SGL+K RKV+DALE
Sbjct: 322 VPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALE 381
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+FEEML RG++P+TG +TSFL+PLCSYGPPHAAM++Y+K+RK GC++S +AYKLLL+RLS
Sbjct: 382 IFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLS 441
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
FGKCGMLL++W EMQESGYPSD E+YEY++ GLC IG LENAVLVMEE++RKGFCP+R
Sbjct: 442 RFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRF 501
Query: 514 VYSKLSNKLLASNKLESAYNLFRKIKIARQNDYARRLWRSKGWHF 558
VYS+LS+KL+ASNK E AY LF KIK AR + AR WRS GWHF
Sbjct: 502 VYSRLSSKLMASNKTELAYKLFLKIKKARATENARSFWRSNGWHF 546
>gi|357454671|ref|XP_003597616.1| hypothetical protein MTR_2g100200 [Medicago truncatula]
gi|124360397|gb|ABN08410.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355486664|gb|AES67867.1| hypothetical protein MTR_2g100200 [Medicago truncatula]
Length = 527
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/558 (59%), Positives = 411/558 (73%), Gaps = 36/558 (6%)
Query: 1 MAFLSRFYRTRYPLSSLSSSFSLFSFSTSVRSNLSYNELLSNQKKNMSSLDEHHVLKELS 60
+ F+ F + ++PL L FS +N S+LDE +L ++S
Sbjct: 6 LQFVLHFSKPKHPLPKLHQRFSSL--------------------QNSSNLDERLILHQIS 45
Query: 61 DLFQISSHNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDAL 120
L I + + +S+S+S +++D FL PE++LRG+FLQKLKGK IE AL
Sbjct: 46 QLLPIPTSKT-----PDSQSDS-------KSIDGFLSPEDKLRGIFLQKLKGKAAIEQAL 93
Query: 121 WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFD 180
NV +D+++D++GKV+N GNL GEAMV+FFNWA+K P V +DV SY+VIVKALGRRKFF
Sbjct: 94 SNVCIDVNVDIIGKVLNFGNLGGEAMVMFFNWALKQPMVPRDVGSYHVIVKALGRRKFFV 153
Query: 181 FMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVL 240
FM VL +M G+ DL LSIV+DSF+ AG V KAIQ+ G L+D GL D E LNV+L
Sbjct: 154 FMMQVLDEMRLNGIKADLLMLSIVIDSFVNAGHVSKAIQLFGNLDDLGLCRDTEVLNVLL 213
Query: 241 WCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
CLC+R HVGAA+S+FNSMKGKV FNV TYN+V+ GWSKLG+V E+E+V+KE+ EGFSP
Sbjct: 214 SCLCRRCHVGAAASVFNSMKGKVSFNVDTYNVVVGGWSKLGRVNEIEKVMKEMEVEGFSP 273
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
D T +F +EGLGRAGR+D+A+EVF +MKEK DT YNA+I N+IS+GDFD MKYY
Sbjct: 274 DFNTLAFFLEGLGRAGRMDEAVEVFGSMKEK----DTAIYNAMIFNFISIGDFDGFMKYY 329
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
GM S NCEPN+ TY+R+I+ L++RKVADAL +F+EML +G+VP TGTITSF++ LCSY
Sbjct: 330 NGMLSDNCEPNIHTYSRMITAFLRTRKVADALLMFDEMLRQGVVPPTGTITSFIKQLCSY 389
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
GPP+AAMM+YKK RK+ CK+S+ AYK+LL RLS FGKCG LL +W EMQE GY SD E+Y
Sbjct: 390 GPPYAAMMIYKKTRKLECKISMEAYKILLMRLSKFGKCGSLLSVWQEMQECGYSSDVEVY 449
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
EY+I+GL NIGQLENAVLVMEE+LRKGFCPSRLVYSKLSNKLLASN E AY LF KIK
Sbjct: 450 EYIISGLYNIGQLENAVLVMEEALRKGFCPSRLVYSKLSNKLLASNLTERAYRLFLKIKH 509
Query: 541 ARQNDYARRLWRSKGWHF 558
AR AR WR GWHF
Sbjct: 510 ARSLKNARSYWRDNGWHF 527
>gi|449455613|ref|XP_004145547.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g43820-like [Cucumis sativus]
Length = 572
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 318/551 (57%), Positives = 404/551 (73%), Gaps = 5/551 (0%)
Query: 9 RTRYPLSSLSSSFSLFSFST-SVRSNLSYNELLSNQKKNMSSLDEHHVLKELSDLFQISS 67
R YPL S + FST SNL + L N +N +DE V+ ELSDL ++
Sbjct: 26 RYHYPLIHSPSPALSYLFSTLDEPSNLFDDGLSGNGDRNQRCIDERFVISELSDLLLVNP 85
Query: 68 HNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDL 127
+ S N KE NS+++ RAVD FLLPEE+LRGVFLQKL GK IE AL N +V L
Sbjct: 86 YGSVYNTLKE---NSIEKQMPVRAVDGFLLPEEKLRGVFLQKLNGKTAIEHALANTDVIL 142
Query: 128 SLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLS 187
S DVV KV+N G+L EAMV FF WAIK P++ KD SYN+I+KALGRR FFD M +VL
Sbjct: 143 SQDVVSKVLNTGSLGSEAMVTFFYWAIKQPSIPKDASSYNIILKALGRRGFFDSMMDVLY 202
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
+M +EGV LE +SIV+DS ++ QV KA+Q L++ GLK D E+LN++L C+C+R
Sbjct: 203 NMTREGVEATLEMVSIVVDSLVKGHQVSKALQFFRNLKEIGLKCDTETLNILLQCMCRRS 262
Query: 248 HVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
HVGAA+S FN KG + FNVMTYNIVI GWS+ G+ E+E++LK + +GFSPD LT ++
Sbjct: 263 HVGAANSFFNLTKGNIPFNVMTYNIVIGGWSRYGRHGEVEQMLKAMELDGFSPDCLTHTY 322
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LIE LGRA +IDDA+++FD M E GC PD +AYNA+ISN+I +GDFD+C+ YY+ M S
Sbjct: 323 LIECLGRANQIDDAVKIFDKMDENGCTPDVDAYNAMISNFICIGDFDQCLTYYERMLSNR 382
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
CEP+M+TY+ LI+G LK++KVADALE+F+EM+ R I+P+TG ITSF++ CSYGPPHAAM
Sbjct: 383 CEPDMNTYSNLITGFLKAKKVADALEMFDEMVAR-IIPTTGAITSFIQLSCSYGPPHAAM 441
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++YKKARKVGC++S AYKLLL RLS FGK GMLL++W+EMQESGY D E YE+ I L
Sbjct: 442 LIYKKARKVGCRISKNAYKLLLMRLSLFGKFGMLLNIWNEMQESGYDPDVETYEHAIDCL 501
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYA 547
C GQLENAVLVMEE LR+GF PSR SKL+NKLLA N+ E AY L+ KIK+AR +
Sbjct: 502 CKTGQLENAVLVMEECLRQGFFPSRRTRSKLNNKLLACNRTEMAYKLWLKIKVARHQENL 561
Query: 548 RRLWRSKGWHF 558
+R WR+KGWH+
Sbjct: 562 QRCWRAKGWHY 572
>gi|10177952|dbj|BAB11311.1| unnamed protein product [Arabidopsis thaliana]
Length = 680
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 289/486 (59%), Positives = 373/486 (76%), Gaps = 9/486 (1%)
Query: 36 YNELL--SNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVD 93
YN L +++ N +DE +VL ELS L ISS+ + + S N V A+D
Sbjct: 29 YNRTLCTASESLNHGVVDESYVLAELSSLLPISSNKTSVSKEDSSSKNQV-------AID 81
Query: 94 EFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWA 153
FL E++LRGVFLQKLKGK I+ +L ++ + LS+D+V V+NRGNLSGEAMV FF+WA
Sbjct: 82 SFLSAEDKLRGVFLQKLKGKSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWA 141
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ P V KDV SY+VI++ALGRRK F FM +VL M EGVNPDLE L+I MDSF+R
Sbjct: 142 VREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHY 201
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
V +AI++ E FG+K ES N +L CLC+R HV AA S+FN+ KG + F+ +YNI+
Sbjct: 202 VRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIM 261
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
ISGWSKLG+V EME+VLKE+V GF PD L++S LIEGLGR GRI+D++E+FD +K KG
Sbjct: 262 ISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGN 321
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
PD N YNA+I N+IS DFDE M+YY+ M CEPN++TY++L+SGL+K RKV+DALE
Sbjct: 322 VPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALE 381
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+FEEML RG++P+TG +TSFL+PLCSYGPPHAAM++Y+K+RK GC++S +AYKLLL+RLS
Sbjct: 382 IFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLS 441
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
FGKCGMLL++W EMQESGYPSD E+YEY++ GLC IG LENAVLVMEE++RKGFCP+R
Sbjct: 442 RFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRF 501
Query: 514 VYSKLS 519
VYS+LS
Sbjct: 502 VYSRLS 507
>gi|297795031|ref|XP_002865400.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311235|gb|EFH41659.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 675
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 274/429 (63%), Positives = 349/429 (81%)
Query: 91 AVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFF 150
++D FL P E+LRGVFLQKLKGK I++ L ++ +DLS+D+V V+NRGNLSGEAMV FF
Sbjct: 74 SIDSFLSPAEKLRGVFLQKLKGKSAIQNCLSSLGIDLSIDIVSDVLNRGNLSGEAMVTFF 133
Query: 151 NWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR 210
NWAI+ P V+KDV SY VI++ALGRRKFF FM +VL M EGVNPDL L+I MDSF+R
Sbjct: 134 NWAIREPGVSKDVDSYCVILRALGRRKFFSFMMDVLRGMVCEGVNPDLRCLTIAMDSFVR 193
Query: 211 AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTY 270
A V +AI++ E +G+K ES N +L CLC+R HV AA+S+FN+ KGK+ F+ +Y
Sbjct: 194 AHYVRRAIELFEESESYGVKCSTESFNALLRCLCERSHVSAANSVFNAKKGKIPFDSCSY 253
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
NI+ISGWSKLG++ ME+VLKE+V GF PD L++S LIEGLGRAGRI+D++E+FD MK
Sbjct: 254 NIMISGWSKLGEIEGMEKVLKEMVEGGFVPDCLSYSHLIEGLGRAGRINDSVEIFDNMKH 313
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
KG D N YNA+I N+IS DFDE M+YY+ M CEPN++TY++L+SGL+K RKV+D
Sbjct: 314 KGSVLDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSD 373
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
ALE+FEEML RGI+P+TG +TSFL+PLCSYGPPHAAM++Y+K+RK GC++S +AYKLLL+
Sbjct: 374 ALEIFEEMLSRGILPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLK 433
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
RLS FGKCGMLL++W EMQE GYPSD E+YEY++ GLC IG LENAVLVMEE++RKGFCP
Sbjct: 434 RLSRFGKCGMLLNVWDEMQECGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCP 493
Query: 511 SRLVYSKLS 519
+R VYS+LS
Sbjct: 494 NRFVYSRLS 502
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 124/292 (42%), Gaps = 36/292 (12%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V +Y +++ + M VL+ +V EG +PD + ++ RA + AIE+F
Sbjct: 145 DVDSYCVILRALGRRKFFSFMMDVLRGMVCEGVNPDLRCLTIAMDSFVRAHYVRRAIELF 204
Query: 326 DTMK---------------------------------EKGCGP-DTNAYNAVISNYISVG 351
+ + +KG P D+ +YN +IS + +G
Sbjct: 205 EESESYGVKCSTESFNALLRCLCERSHVSAANSVFNAKKGKIPFDSCSYNIMISGWSKLG 264
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
+ + K K M P+ +Y+ LI GL ++ ++ D++E+F+ M +G V
Sbjct: 265 EIEGMEKVLKEMVEGGFVPDCLSYSHLIEGLGRAGRINDSVEIFDNMKHKGSVLDANVYN 324
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
+ + S +M Y++ C+ +L Y L+ L K L+++ EM
Sbjct: 325 AMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSR 384
Query: 472 G-YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
G P+ G + + + LC+ G A+++ ++S + G S Y L +L
Sbjct: 385 GILPTTGLVTSF-LKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRL 435
>gi|356557957|ref|XP_003547276.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g43820-like [Glycine max]
Length = 505
Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust.
Identities = 302/556 (54%), Positives = 380/556 (68%), Gaps = 58/556 (10%)
Query: 3 FLSRFYRTRYPLSSLSSSFSLFSFSTSVRSNLSYNELLSNQKKNMSSLDEHHVLKELSDL 62
FL+RF + P F ++ RS LS + +LD+ VL +LS L
Sbjct: 8 FLTRFAKPHNP------------FPSTRRSPLSSLHA-PPPHHDQPNLDDRLVLDQLSHL 54
Query: 63 FQISSHNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWN 122
F + S V+ N+ + AVD FL PE++LRGVFLQKLKG+ IE AL N
Sbjct: 55 FPTLTSKSQNPVFPNPHPNA------ANAVDAFLPPEDKLRGVFLQKLKGRAAIESALSN 108
Query: 123 VNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFM 182
V V Y+VIVKALGRRKFFDFM
Sbjct: 109 VAV---------------------------------------XYHVIVKALGRRKFFDFM 129
Query: 183 CNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWC 242
+ L DM + ++ DL LS+V+DSF+RAG V +AIQ+ G L+D G++ D E+LNV+L C
Sbjct: 130 MDALCDMRRNAIDGDLFMLSVVVDSFVRAGHVSRAIQVFGNLDDLGVRRDTEALNVLLLC 189
Query: 243 LCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
LC+R HVGAA+S+ NSMKGKV F+V TYN V GWS+ G+V E+ERV++E+ A+G PD
Sbjct: 190 LCRRSHVGAANSVLNSMKGKVDFDVGTYNAVAGGWSRFGRVSEVERVMREMEADGLRPDC 249
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
TF FLIEGLGR GR+D+A+E+ MKE C PDT YNAVI N++SVGDF+EC+KYY
Sbjct: 250 RTFGFLIEGLGREGRMDEAVEILCGMKEMNCQPDTETYNAVIFNFVSVGDFEECIKYYNR 309
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M S NCEPN+DTY R+I+ L++RKVADAL +F+EML RG+VPSTGTIT+F++ LCSYGP
Sbjct: 310 MLSDNCEPNLDTYARMINRFLRARKVADALLMFDEMLRRGVVPSTGTITTFIKRLCSYGP 369
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
P+AA+M+YKKARK+GC +S+ AYK+LL RLS GKCG LL +W EMQE GY SD E+YE
Sbjct: 370 PYAALMIYKKARKLGCVISMEAYKILLMRLSMVGKCGTLLSIWEEMQECGYSSDLEVYEC 429
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+I+GLCN+GQLENAVLVMEE+LRKGFCPSRLVYSKLSN+LLAS+K E AY LF KIK AR
Sbjct: 430 IISGLCNVGQLENAVLVMEEALRKGFCPSRLVYSKLSNRLLASDKSERAYKLFLKIKXAR 489
Query: 543 QNDYARRLWRSKGWHF 558
+ A++ WRS GWHF
Sbjct: 490 SLENAKKYWRSNGWHF 505
>gi|222622668|gb|EEE56800.1| hypothetical protein OsJ_06387 [Oryza sativa Japonica Group]
Length = 540
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 236/469 (50%), Positives = 330/469 (70%), Gaps = 11/469 (2%)
Query: 100 ERLRGVFLQKLKGKGVIEDALWNVNVD----LSLDVVGKVVNRGNLSGEAMVLFFNWAIK 155
+RLRGVFL K G+ + AL + +D LS +V+ VV+ GN SG A V FF+WAI
Sbjct: 73 DRLRGVFLLKPPGRAALHRALSSTGIDAAAALSPEVLSGVVSHGNFSGAATVDFFDWAIA 132
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
+ + V + N++++ALGRRKFF F L M K GV+PD+ TL I++DS I A V
Sbjct: 133 NSKLPPSVDTCNIVIRALGRRKFFAFFEPALEIMRKNGVSPDISTLEIIIDSLIAARHVN 192
Query: 216 KAIQMLGRLEDFGLKF-----DAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMT 269
AIQ++ + FGL E V++ CLC+R HVG ASSL + +G+ + +
Sbjct: 193 TAIQLIN-TDHFGLGVWQTCQRKEIFTVLINCLCRRSHVGLASSLLQASRGETIDLDNHM 251
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
YN VI GW++ G+V ++E + ++ +G PD +++ LIE LGRA R ++A++VF+ M
Sbjct: 252 YNEVIGGWARFGRVDKVEHFWETMLEDGLVPDQVSYCHLIEALGRANRAEEALQVFEKMV 311
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
+G P T AYNA+I N+ISVG+FD C+KYYK M NC PN+DTY ++I L+ RKVA
Sbjct: 312 HEGYCPTTMAYNALIFNFISVGNFDRCIKYYKDMLDNNCPPNIDTYRKMIRAFLRERKVA 371
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
DAL++F+EML RGI+PSTG IT F+EPLC++GPPHAA+++YK++RK GC++S+ AYKLLL
Sbjct: 372 DALQMFDEMLSRGILPSTGMITLFIEPLCTFGPPHAALLIYKRSRKAGCRISMKAYKLLL 431
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
RL+ FGK G +L +W EMQESG+PSD EIYE+++ GLCN+G+++ AV V+EES+RKGFC
Sbjct: 432 ERLAMFGKSGTVLQIWEEMQESGHPSDKEIYEFIVNGLCNVGKVDAAVSVVEESIRKGFC 491
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYARRLWRSKGWHF 558
R+VY KL+NKLL NK+E+AYNLF+K++ AR +R WR+ GWHF
Sbjct: 492 LGRVVYGKLNNKLLEMNKVETAYNLFKKVRDARVIANSRNYWRANGWHF 540
>gi|218190552|gb|EEC72979.1| hypothetical protein OsI_06882 [Oryza sativa Indica Group]
Length = 541
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 236/469 (50%), Positives = 330/469 (70%), Gaps = 11/469 (2%)
Query: 100 ERLRGVFLQKLKGKGVIEDALWNVNVD----LSLDVVGKVVNRGNLSGEAMVLFFNWAIK 155
+RLRGVFL K G+ + AL + +D LS +V+ VV+ GN SG A V FF+WAI
Sbjct: 74 DRLRGVFLLKPPGRAALHRALSSTGIDAAAALSPEVLSGVVSHGNFSGAATVDFFDWAIA 133
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
+ + V + N++++ALGRRKFF F L M K GV+PD+ TL I++DS I A V
Sbjct: 134 NSKLPPSVDTCNIVIRALGRRKFFAFFEPALEIMRKNGVSPDISTLEIIIDSLIAARHVN 193
Query: 216 KAIQMLGRLEDFGLKF-----DAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMT 269
AIQ++ + FGL E V++ CLC+R HVG ASSL + +G+ + +
Sbjct: 194 TAIQLIN-TDHFGLGVWQTCQRKEIFTVLINCLCRRSHVGLASSLLQASRGETIDLDNHM 252
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
YN VI GW++ G+V ++E + ++ +G PD +++ LIE LGRA R ++A++VF+ M
Sbjct: 253 YNEVIGGWARFGRVDKVEHFWETMLEDGLVPDQVSYCHLIEALGRANRAEEALQVFEKMV 312
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
+G P T AYNA+I N+ISVG+FD C+KYYK M NC PN+DTY ++I L+ RKVA
Sbjct: 313 HEGYCPTTMAYNALIFNFISVGNFDRCIKYYKDMLDNNCPPNIDTYRKMIRAFLRERKVA 372
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
DAL++F+EML RGI+PSTG IT F+EPLC++GPPHAA+++YK++RK GC++S+ AYKLLL
Sbjct: 373 DALQMFDEMLSRGILPSTGMITLFIEPLCTFGPPHAALLIYKRSRKAGCRISMKAYKLLL 432
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
RL+ FGK G +L +W EMQESG+PSD EIYE+++ GLCN+G+++ AV V+EES+RKGFC
Sbjct: 433 ERLAMFGKSGTVLQIWEEMQESGHPSDKEIYEFIVNGLCNVGKVDAAVSVVEESIRKGFC 492
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYARRLWRSKGWHF 558
R+VY KL+NKLL NK+E+AYNLF+K++ AR +R WR+ GWHF
Sbjct: 493 LGRVVYGKLNNKLLEMNKVETAYNLFKKVRDARVIANSRNYWRANGWHF 541
>gi|326513966|dbj|BAJ92133.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/466 (49%), Positives = 328/466 (70%), Gaps = 8/466 (1%)
Query: 100 ERLRGVFLQKLKGKGVIEDALWNVNVD-LSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPN 158
+RLRGVFLQK G+ + AL + +D LS +V+ VV+RGNLSG A V +WAI
Sbjct: 73 DRLRGVFLQKPPGRAALHRALSSTGLDALSPEVLSDVVSRGNLSGSATVDLLDWAICSAK 132
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ V++ N++V+ALGRRKFF + L M K GV PDL TL I+MD+ + A QV KA+
Sbjct: 133 LRPSVQTCNIVVRALGRRKFFTSVEPALEVMRKNGVFPDLTTLQIIMDTLVAARQVNKAV 192
Query: 219 QMLGRLEDFGLKFDA-----ESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNI 272
QML + FG+ + E+ + ++ CLC+R HVG ASSL + +G+ + YN
Sbjct: 193 QML-ESDQFGIGIEKTCHRKEAFSALIECLCRRSHVGVASSLVQAARGQPFHLDKQVYND 251
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
V+ GW++ G+V +++ ++ +G PD ++ LIE LGRAG+ ++A+ VF+ M ++G
Sbjct: 252 VLGGWARFGRVDKLQHFWAMMLEDGLVPDDVSHCHLIEALGRAGQAEEALRVFEKMVQEG 311
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
GP T AYNA++ N+ISVGD D +KYYK M NC PN DTY ++I LLK+R+VADAL
Sbjct: 312 YGPTTMAYNALVFNFISVGDLDRSIKYYKDMVDNNCPPNSDTYCKMIRALLKTRRVADAL 371
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
++F++ML +G++P TG ITSF+EPLC++GPPHAA+M+Y+K+RK GC +SL YKLLL RL
Sbjct: 372 QMFDDMLAQGVLPDTGIITSFIEPLCTFGPPHAALMIYQKSRKAGCTISLKTYKLLLERL 431
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
+ FGK G +L++W EMQESGYPSD EIYE+++ GLCN+G+++ AV V+EESLRKGFC R
Sbjct: 432 ARFGKSGTVLNIWEEMQESGYPSDKEIYEFIVNGLCNVGKVDAAVFVVEESLRKGFCLGR 491
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYARRLWRSKGWHF 558
+VYSKL+++LL +K+E+AYNL +KIK R +R R+ GWH
Sbjct: 492 VVYSKLNDRLLEMDKVETAYNLSKKIKHGRTLANSRNYCRANGWHL 537
>gi|242084014|ref|XP_002442432.1| hypothetical protein SORBIDRAFT_08g020000 [Sorghum bicolor]
gi|241943125|gb|EES16270.1| hypothetical protein SORBIDRAFT_08g020000 [Sorghum bicolor]
Length = 535
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 226/468 (48%), Positives = 326/468 (69%), Gaps = 11/468 (2%)
Query: 100 ERLRGVFLQKLKGKGVIEDALWNVNVD----LSLDVVGKVVNRGNLSGEAMVLFFNWAIK 155
+RLRGVFL+K G+ + AL + + LS DV+ VVN G+LSG A V FF+WA+
Sbjct: 68 DRLRGVFLRKPPGRTALHQALSSTGIGAAMALSPDVLANVVNAGDLSGAATVTFFDWAVT 127
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
+ V + N++++ALGR+KFFDF+ + L M + + PDL TL I++DS + A V
Sbjct: 128 NSKPPPSVHTCNIVIRALGRKKFFDFLDDALQIMRRNNIFPDLTTLEIIIDSLVAARHVS 187
Query: 216 KAIQMLGRLEDFGLKF-----DAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMT 269
+A+++L + FG E+ V++ CLC+R HVG ASSL + + ++L +
Sbjct: 188 RAVEVLST-DQFGFGIGKACHKKEAFTVLIRCLCRRSHVGLASSLLQAARKELLGLDCNV 246
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
YN V+ GW++ G V +++ V ++ +G P+ ++ LIEGLGRAG+ +DA+ F+ M
Sbjct: 247 YNDVMGGWARFGSVDKLQEVWTKMQEDGLVPNEVSHCHLIEGLGRAGQTEDALREFENMV 306
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
+ GP T AYNA+I N+ISVGD D C+KYYK M NC PN+DTY++++ LK R+VA
Sbjct: 307 HERYGPTTMAYNALIFNFISVGDLDSCIKYYKDMLEKNCPPNIDTYSKMVKAFLKGRRVA 366
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
DAL++F++ML +G++P+TG ITSF+ PLC++GPPHAA+M+YKK+RK GC +SL AYKLLL
Sbjct: 367 DALQMFDDMLVQGVLPNTGMITSFINPLCTFGPPHAALMIYKKSRKAGCVISLKAYKLLL 426
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
RL+ FGK G++LD+W EMQE GY D EIYE+++ GLCN+G+++ AV V+EESLR GFC
Sbjct: 427 ERLAKFGKSGIVLDIWEEMQECGYQPDKEIYEFIVNGLCNVGKVDAAVSVVEESLRNGFC 486
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYARRLWRSKGWH 557
R+VYSKL+NKLL +K+E+AYNLF+K+K AR +R R+ GWH
Sbjct: 487 LGRVVYSKLNNKLLEMDKVETAYNLFKKVKHARALTNSRNYCRANGWH 534
>gi|115445705|ref|NP_001046632.1| Os02g0304800 [Oryza sativa Japonica Group]
gi|113536163|dbj|BAF08546.1| Os02g0304800 [Oryza sativa Japonica Group]
Length = 617
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/448 (50%), Positives = 317/448 (70%), Gaps = 11/448 (2%)
Query: 100 ERLRGVFLQKLKGKGVIEDALWNVNVD----LSLDVVGKVVNRGNLSGEAMVLFFNWAIK 155
+RLRGVFL K G+ + AL + +D LS +V+ VV+ GN SG A V FF+WAI
Sbjct: 73 DRLRGVFLLKPPGRAALHRALSSTGIDAAAALSPEVLSGVVSHGNFSGAATVDFFDWAIA 132
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
+ + V + N++++ALGRRKFF F L M K GV+PD+ TL I++DS I A V
Sbjct: 133 NSKLPPSVDTCNIVIRALGRRKFFAFFEPALEIMRKNGVSPDISTLEIIIDSLIAARHVN 192
Query: 216 KAIQMLGRLEDFGLKF-----DAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMT 269
AIQ++ + FGL E V++ CLC+R HVG ASSL + +G+ + +
Sbjct: 193 TAIQLINT-DHFGLGVWQTCQRKEIFTVLINCLCRRSHVGLASSLLQASRGETIDLDNHM 251
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
YN VI GW++ G+V ++E + ++ +G PD +++ LIE LGRA R ++A++VF+ M
Sbjct: 252 YNEVIGGWARFGRVDKVEHFWETMLEDGLVPDQVSYCHLIEALGRANRAEEALQVFEKMV 311
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
+G P T AYNA+I N+ISVG+FD C+KYYK M NC PN+DTY ++I L+ RKVA
Sbjct: 312 HEGYCPTTMAYNALIFNFISVGNFDRCIKYYKDMLDNNCPPNIDTYRKMIRAFLRERKVA 371
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
DAL++F+EML RGI+PSTG IT F+EPLC++GPPHAA+++YK++RK GC++S+ AYKLLL
Sbjct: 372 DALQMFDEMLSRGILPSTGMITLFIEPLCTFGPPHAALLIYKRSRKAGCRISMKAYKLLL 431
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
RL+ FGK G +L +W EMQESG+PSD EIYE+++ GLCN+G+++ AV V+EES+RKGFC
Sbjct: 432 ERLAMFGKSGTVLQIWEEMQESGHPSDKEIYEFIVNGLCNVGKVDAAVSVVEESIRKGFC 491
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRK 537
R+VY KL+NKLL NK+E+AYNLF+K
Sbjct: 492 LGRVVYGKLNNKLLEMNKVETAYNLFKK 519
>gi|293336637|ref|NP_001167760.1| hypothetical protein [Zea mays]
gi|223943823|gb|ACN25995.1| unknown [Zea mays]
gi|414877894|tpg|DAA55025.1| TPA: hypothetical protein ZEAMMB73_945476 [Zea mays]
Length = 536
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/470 (46%), Positives = 326/470 (69%), Gaps = 13/470 (2%)
Query: 100 ERLRGVFLQKLKGKGVIEDALWNVNVD----LSLDVVGKVVNRGNLSGEAMVLFFNWAIK 155
+RLRGVFL+K G+ V+ AL + + LS +V+ VVN NLSG A V +F+WA+
Sbjct: 69 DRLRGVFLRKPSGRNVLHQALSSTGIGATMALSPEVLANVVNTSNLSGAATVTYFDWAVT 128
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
+ V + N++++ALGR+KFFD++ + L M + + PDL TL I+MDS + A V
Sbjct: 129 NSKPPPSVHTCNIVIRALGRKKFFDYLDDALQIMRRNNIFPDLTTLEIIMDSLVAARHVS 188
Query: 216 KAIQMLGRLEDFGLKFDA-----ESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMT- 269
+A++++ + FG ++ +++ CLC+R HVG ASSL + + K LF + +
Sbjct: 189 RAVEVIST-DQFGFGIGKTCHRKDAFTILIRCLCRRSHVGLASSLLQAAR-KELFGLDSN 246
Query: 270 -YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
YN V+ GW++ G V +++ V ++ +G P+ ++ LIEGLGR G+ +DA++ F+ M
Sbjct: 247 VYNDVMGGWARFGSVDKLQEVWTKMQEDGLVPNEVSHCHLIEGLGRVGQTEDALKAFEYM 306
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ GP T AYN +I N+I +GD D C+KYYK M NC PN++TY+++I L+ R+V
Sbjct: 307 VHERYGPTTMAYNVLIFNFIHIGDLDSCIKYYKDMLDKNCSPNIETYSKMIKAFLRGRRV 366
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
ADAL++F++ML +G++P+TG ITSF+ PLC++GPPHAA+M+YKK+RK GC +SL AYKLL
Sbjct: 367 ADALQMFDDMLIQGVLPNTGMITSFINPLCTFGPPHAALMIYKKSRKAGCVISLKAYKLL 426
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L RL+ FGK G++LD+W EMQE GY D EIYE+++ GLCN+G+++ AV V+EESLR GF
Sbjct: 427 LERLAKFGKSGIVLDIWEEMQECGYQPDKEIYEFIVNGLCNVGKVDAAVSVVEESLRNGF 486
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYARRLWRSKGWHF 558
C R+VYSKL+NKLL +K+E+AYNLF+K+K AR +R R+ GWHF
Sbjct: 487 CLGRVVYSKLNNKLLEMDKVETAYNLFKKVKHARALTNSRNYCRANGWHF 536
>gi|357144169|ref|XP_003573197.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g43820-like [Brachypodium distachyon]
Length = 531
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/475 (47%), Positives = 323/475 (68%), Gaps = 13/475 (2%)
Query: 96 LLPE--ERLRGVFLQKLKGKGVIEDALWNVNVDLSL----DVVGKVVNRGNLSGEAMVLF 149
LLP +RLR VFL K G+ + AL + +D +L + + VVN GNLSG A V
Sbjct: 58 LLPSLADRLRVVFLHKPPGRAALHRALSSTGLDAALALHPEALSNVVNAGNLSGAATVDL 117
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F+WAI + + + + N +++ALGRRKFF + + L M K G+ PD TL I++DS +
Sbjct: 118 FDWAISNAKLPPSLHTCNTVIRALGRRKFFASIEDALEIMRKNGIFPDPTTLEIIIDSLV 177
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAE-----SLNVVLWCLCQRLHVGAASSLFNSMKGKVL 264
+ Q+ +A+Q+L + + FG F + + ++ CLCQR HVG ASSL + +G L
Sbjct: 178 ASRQINRAVQLL-KSDQFGFGFCQTCHRKVAFSALINCLCQRSHVGVASSLLQAARGDHL 236
Query: 265 -FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+ YN VI GW++ G+V ++E ++ +G +PD ++ LIE LGRAG+ ++ ++
Sbjct: 237 DLDKHVYNDVIGGWARFGRVDKLEHFWAMMLEDGLAPDEVSHCHLIEALGRAGQPEEGLK 296
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
VF+ M +G GP T AYNA+I N+IS GD D C+KYYK M NC PN TY ++I LL
Sbjct: 297 VFEKMVHEGYGPTTTAYNALIFNFISSGDLDRCIKYYKDMVDKNCPPNSATYCKMIRALL 356
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
++R+VADAL++F +M RG++P+TG IT F+EPLC+YGPPHAA+M+Y+K+RK GC +SL
Sbjct: 357 RARRVADALQMFGDMFTRGVLPNTGDITLFIEPLCTYGPPHAALMIYRKSRKAGCTISLK 416
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
AYKLLL RL+ FGK G++L +W EMQESG+PSD EIYE+++ GLCN+G+L+ AV V+EES
Sbjct: 417 AYKLLLARLARFGKSGIVLKIWEEMQESGHPSDKEIYEFIVNGLCNVGKLDAAVSVVEES 476
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYARRLWRSKGWHF 558
L KG C R+VYSKL+N+LL +K+E+AYNL +KIK+ R +R R+ GWH
Sbjct: 477 LMKGICLGRVVYSKLNNRLLEMDKVETAYNLSKKIKVGRTLANSRNYCRANGWHL 531
>gi|449534287|ref|XP_004174096.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g43820-like, partial [Cucumis sativus]
Length = 331
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 162/295 (54%), Positives = 210/295 (71%), Gaps = 3/295 (1%)
Query: 32 SNLSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRA 91
SNL + L N +N +DE V+ ELSDL ++ + S N KE NS+++ RA
Sbjct: 24 SNLFDDGLSGNGDRNQRCIDERFVISELSDLLLVNPYGSVYNTLKE---NSIEKQMPVRA 80
Query: 92 VDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFN 151
VD FLLPEE+LRGVFLQKL GK IE AL N +V LS DVV KV+N G+L EAMV FF
Sbjct: 81 VDGFLLPEEKLRGVFLQKLNGKTAIEHALANTDVILSQDVVSKVLNTGSLGSEAMVTFFY 140
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
WAIK P++ KD SYN+I+KALGRR FFD M +VL +M +EGV LE +SIV+DS ++
Sbjct: 141 WAIKQPSIPKDASSYNIILKALGRRGFFDSMMDVLYNMTREGVEATLEMVSIVVDSLVKG 200
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYN 271
QV KA+Q L++ GLK D E+LN++L C+C+R HVGAA+S FN KG + FNVMTYN
Sbjct: 201 HQVSKALQFFRNLKEIGLKCDTETLNILLQCMCRRSHVGAANSFFNLTKGNIPFNVMTYN 260
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
IVI GWS+ G+ E+E++LK + +GFSPD LT ++LIE LGRA +IDDA+++FD
Sbjct: 261 IVIGGWSRYGRHGEVEQMLKAMELDGFSPDCLTHTYLIECLGRANQIDDAVKIFD 315
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 81/178 (45%), Gaps = 1/178 (0%)
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
+K+ D ++YN ++ G FD M M+ E ++ + ++ L+K +
Sbjct: 143 IKQPSIPKDASSYNIILKALGRRGFFDSMMDVLYNMTREGVEATLEMVSIVVDSLVKGHQ 202
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
V+ AL+ F + + G+ T T+ L+ +C AA + K ++ Y +
Sbjct: 203 VSKALQFFRNLKEIGLKCDTETLNILLQCMCRRSHVGAANSFF-NLTKGNIPFNVMTYNI 261
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
++ S +G+ G + + M+ G+ D + Y+I L Q+++AV + ++ ++
Sbjct: 262 VIGGWSRYGRHGEVEQMLKAMELDGFSPDCLTHTYLIECLGRANQIDDAVKIFDKWMK 319
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 64/169 (37%), Gaps = 34/169 (20%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
+YNI++ + G M VL + EG S +++ L + ++ A++ F +
Sbjct: 154 SYNIILKALGRRGFFDSMMDVLYNMTREGVEATLEMVSIVVDSLVKGHQVSKALQFFRNL 213
Query: 329 KEKGCGPDTN----------------------------------AYNAVISNYISVGDFD 354
KE G DT YN VI + G
Sbjct: 214 KEIGLKCDTETLNILLQCMCRRSHVGAANSFFNLTKGNIPFNVMTYNIVIGGWSRYGRHG 273
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
E + K M P+ T+T LI L ++ ++ DA+++F++ + +
Sbjct: 274 EVEQMLKAMELDGFSPDCLTHTYLIECLGRANQIDDAVKIFDKWMKTAV 322
>gi|255539260|ref|XP_002510695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551396|gb|EEF52882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 195
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 144/192 (75%), Positives = 170/192 (88%)
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
NC+P+++TYT+LIS +K RKVADALE+ +EML RGIVP+TG ITSF+EPLCS+GPPHAA
Sbjct: 4 NCDPDINTYTKLISAFIKGRKVADALEMLDEMLGRGIVPTTGDITSFIEPLCSFGPPHAA 63
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
MM+YKKARK GCK+SLTAYKLLL RLS FGKCGMLL++W EMQE+GY SD E+YEYVI G
Sbjct: 64 MMIYKKARKAGCKISLTAYKLLLMRLSRFGKCGMLLNIWDEMQENGYTSDMEVYEYVING 123
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDY 546
LCNIGQLENAVLVMEESL KGFCPSRL+YSKL+NKLLAS+K+E AY L+ K++ AR N+
Sbjct: 124 LCNIGQLENAVLVMEESLHKGFCPSRLIYSKLNNKLLASSKVERAYKLYLKVRDARSNEN 183
Query: 547 ARRLWRSKGWHF 558
ARR WR+ GWHF
Sbjct: 184 ARRFWRANGWHF 195
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 71/169 (42%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
++ TY +IS + K +V + +L E++ G P + + IE L G A+ ++
Sbjct: 8 DINTYTKLISAFIKGRKVADALEMLDEMLGRGIVPTTGDITSFIEPLCSFGPPHAAMMIY 67
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
++ GC AY ++ G + + M +M+ Y +I+GL
Sbjct: 68 KKARKAGCKISLTAYKLLLMRLSRFGKCGMLLNIWDEMQENGYTSDMEVYEYVINGLCNI 127
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
++ +A+ V EE L +G PS + L + A +Y K R
Sbjct: 128 GQLENAVLVMEESLHKGFCPSRLIYSKLNNKLLASSKVERAYKLYLKVR 176
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 1/149 (0%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
PD T++ LI + ++ DA+E+ D M +G P T + I S G M
Sbjct: 7 PDINTYTKLISAFIKGRKVADALEMLDEMLGRGIVPTTGDITSFIEPLCSFGPPHAAMMI 66
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
YK C+ ++ Y L+ L + K L +++EM + G + LC+
Sbjct: 67 YKKARKAGCKISLTAYKLLLMRLSRFGKCGMLLNIWDEMQENGYTSDMEVYEYVINGLCN 126
Query: 420 YGP-PHAAMMMYKKARKVGCKLSLTAYKL 447
G +A ++M + K C L KL
Sbjct: 127 IGQLENAVLVMEESLHKGFCPSRLIYSKL 155
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 78/171 (45%), Gaps = 1/171 (0%)
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+ +PD+ T + ++ +FI+ +V A++ML + G+ + + LC
Sbjct: 2 RNNCDPDINTYTKLISAFIKGRKVADALEMLDEMLGRGIVPTTGDITSFIEPLCSFGPPH 61
Query: 251 AASSLF-NSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
AA ++ + K ++ Y +++ S+ G+ + + E+ G++ D + ++I
Sbjct: 62 AAMMIYKKARKAGCKISLTAYKLLLMRLSRFGKCGMLLNIWDEMQENGYTSDMEVYEYVI 121
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
GL G++++A+ V + KG P Y+ + + ++ + K Y
Sbjct: 122 NGLCNIGQLENAVLVMEESLHKGFCPSRLIYSKLNNKLLASSKVERAYKLY 172
>gi|295831101|gb|ADG39219.1| AT5G43820-like protein [Capsella grandiflora]
Length = 169
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/168 (66%), Positives = 143/168 (85%)
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
L++S LIEGLGRAGRI+D++E+FD +K KG PD N YNA+I N+IS DFDE M YY+
Sbjct: 1 LSYSHLIEGLGRAGRINDSVEIFDNIKHKGSVPDANVYNAMICNFISARDFDESMXYYRR 60
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M CEPN++TY++L+SGL+K RKV+DALE+FEEML RG +P+TG +TSFL+PLCSYGP
Sbjct: 61 MLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGFLPTTGLVTSFLKPLCSYGP 120
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
PHAAM++Y+K+RK GCK+S +AYKLLL+RLS FGKCGMLL++W EMQE
Sbjct: 121 PHAAMVIYQKSRKAGCKISESAYKLLLKRLSRFGKCGMLLNVWDEMQE 168
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
+Y+ LI GL ++ ++ D++E+F+ + +G VP + + S +M Y++
Sbjct: 2 SYSHLIEGLGRAGRINDSVEIFDNIKHKGSVPDANVYNAMICNFISARDFDESMXYYRRM 61
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY-PSDGEIYEYVIAGLCNIGQ 492
C+ +L Y L+ L K L+++ EM G+ P+ G + + + LC+ G
Sbjct: 62 LDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGFLPTTGLVTSF-LKPLCSYGP 120
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
A+++ ++S + G S Y L +L
Sbjct: 121 PHAAMVIYQKSRKAGCKISESAYKLLLKRL 150
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 255 LFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
+F+++K K + + YN +I + E + ++ E P+ T+S L+ GL
Sbjct: 22 IFDNIKHKGSVPDANVYNAMICNFISARDFDESMXYYRRMLDEECEPNLETYSKLVSGLI 81
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+ ++ DA+E+F+ M +G P T + + S G M Y+ C+ +
Sbjct: 82 KGRKVSDALEIFEEMLSRGFLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCKISES 141
Query: 374 TYTRLISGLLKSRKVADALEVFEEM 398
Y L+ L + K L V++EM
Sbjct: 142 AYKLLLKRLSRFGKCGMLLNVWDEM 166
>gi|345293605|gb|AEN83294.1| AT5G43820-like protein, partial [Capsella rubella]
gi|345293607|gb|AEN83295.1| AT5G43820-like protein, partial [Capsella rubella]
gi|345293609|gb|AEN83296.1| AT5G43820-like protein, partial [Capsella rubella]
gi|345293611|gb|AEN83297.1| AT5G43820-like protein, partial [Capsella rubella]
gi|345293613|gb|AEN83298.1| AT5G43820-like protein, partial [Capsella rubella]
gi|345293615|gb|AEN83299.1| AT5G43820-like protein, partial [Capsella rubella]
Length = 170
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/170 (65%), Positives = 144/170 (84%)
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
L++S LIEGLGRAGRI+D++E+FD +K KG PD N YNA+I N+IS DFDE + YY+
Sbjct: 1 LSYSHLIEGLGRAGRINDSVEIFDNIKHKGSVPDANVYNAMICNFISARDFDESVMYYRR 60
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M CEPN++TY++L+SGL+K RKV+DALE+FEEML RG +P+TG +TSFL+PLCSYGP
Sbjct: 61 MLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGFLPTTGLVTSFLKPLCSYGP 120
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
PHAAM++Y+K+RK GCK+S +AYKLLL+RLS FGKCGMLL++W EMQE G
Sbjct: 121 PHAAMVIYQKSRKAGCKISESAYKLLLKRLSRFGKCGMLLNVWDEMQECG 170
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
+Y+ LI GL ++ ++ D++E+F+ + +G VP + + S ++M Y++
Sbjct: 2 SYSHLIEGLGRAGRINDSVEIFDNIKHKGSVPDANVYNAMICNFISARDFDESVMYYRRM 61
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY-PSDGEIYEYVIAGLCNIGQ 492
C+ +L Y L+ L K L+++ EM G+ P+ G + + + LC+ G
Sbjct: 62 LDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGFLPTTGLVTSF-LKPLCSYGP 120
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
A+++ ++S + G S Y L +L
Sbjct: 121 PHAAMVIYQKSRKAGCKISESAYKLLLKRL 150
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Query: 255 LFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
+F+++K K + + YN +I + E + ++ E P+ T+S L+ GL
Sbjct: 22 IFDNIKHKGSVPDANVYNAMICNFISARDFDESVMYYRRMLDEECEPNLETYSKLVSGLI 81
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+ ++ DA+E+F+ M +G P T + + S G M Y+ C+ +
Sbjct: 82 KGRKVSDALEIFEEMLSRGFLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCKISES 141
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRG 402
Y L+ L + K L V++EM + G
Sbjct: 142 AYKLLLKRLSRFGKCGMLLNVWDEMQECG 170
>gi|295831105|gb|ADG39221.1| AT5G43820-like protein [Capsella grandiflora]
Length = 169
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 112/168 (66%), Positives = 143/168 (85%)
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
L++S LIEGLGRAGRI+D++E+FD +K KG PD N YNA+I N+IS DFDE M YY+
Sbjct: 1 LSYSHLIEGLGRAGRINDSVEIFDNIKHKGSVPDANVYNAMICNFISARDFDESMMYYRR 60
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M CEPN++TY++L+SGL+K RKV+DALE+FEEML RG +P+TG +TSFL+PLCSYGP
Sbjct: 61 MLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGFLPTTGLVTSFLKPLCSYGP 120
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
PHAAM++Y+K+RK GCK+S +AYKLLL+RLS FGKCGMLL++W EMQE
Sbjct: 121 PHAAMVIYQKSRKAGCKISESAYKLLLKRLSRFGKCGMLLNVWDEMQE 168
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
+Y+ LI GL ++ ++ D++E+F+ + +G VP + + S +MM Y++
Sbjct: 2 SYSHLIEGLGRAGRINDSVEIFDNIKHKGSVPDANVYNAMICNFISARDFDESMMYYRRM 61
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY-PSDGEIYEYVIAGLCNIGQ 492
C+ +L Y L+ L K L+++ EM G+ P+ G + + + LC+ G
Sbjct: 62 LDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGFLPTTGLVTSF-LKPLCSYGP 120
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
A+++ ++S + G S Y L +L
Sbjct: 121 PHAAMVIYQKSRKAGCKISESAYKLLLKRL 150
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 255 LFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
+F+++K K + + YN +I + E + ++ E P+ T+S L+ GL
Sbjct: 22 IFDNIKHKGSVPDANVYNAMICNFISARDFDESMMYYRRMLDEECEPNLETYSKLVSGLI 81
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+ ++ DA+E+F+ M +G P T + + S G M Y+ C+ +
Sbjct: 82 KGRKVSDALEIFEEMLSRGFLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCKISES 141
Query: 374 TYTRLISGLLKSRKVADALEVFEEM 398
Y L+ L + K L V++EM
Sbjct: 142 AYKLLLKRLSRFGKCGMLLNVWDEM 166
>gi|295831107|gb|ADG39222.1| AT5G43820-like protein [Capsella grandiflora]
Length = 169
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 111/168 (66%), Positives = 143/168 (85%)
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
L++S LIEGLGRAGRI+D++E+FD +K KG PD N YNA+I N+IS DFDE + YY+
Sbjct: 1 LSYSHLIEGLGRAGRINDSVEIFDNIKHKGSVPDANVYNAMICNFISARDFDESVMYYRR 60
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M CEPN++TY++L+SGL+K RKV+DALE+FEEML RG +P+TG +TSFL+PLCSYGP
Sbjct: 61 MLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGFLPTTGLVTSFLKPLCSYGP 120
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
PHAAM++Y+K+RK GCK+S +AYKLLL+RLS FGKCGMLL++W EMQE
Sbjct: 121 PHAAMVIYQKSRKAGCKISESAYKLLLKRLSRFGKCGMLLNVWDEMQE 168
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
+Y+ LI GL ++ ++ D++E+F+ + +G VP + + S ++M Y++
Sbjct: 2 SYSHLIEGLGRAGRINDSVEIFDNIKHKGSVPDANVYNAMICNFISARDFDESVMYYRRM 61
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY-PSDGEIYEYVIAGLCNIGQ 492
C+ +L Y L+ L K L+++ EM G+ P+ G + + + LC+ G
Sbjct: 62 LDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGFLPTTGLVTSF-LKPLCSYGP 120
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
A+++ ++S + G S Y L +L
Sbjct: 121 PHAAMVIYQKSRKAGCKISESAYKLLLKRL 150
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 255 LFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
+F+++K K + + YN +I + E + ++ E P+ T+S L+ GL
Sbjct: 22 IFDNIKHKGSVPDANVYNAMICNFISARDFDESVMYYRRMLDEECEPNLETYSKLVSGLI 81
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+ ++ DA+E+F+ M +G P T + + S G M Y+ C+ +
Sbjct: 82 KGRKVSDALEIFEEMLSRGFLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCKISES 141
Query: 374 TYTRLISGLLKSRKVADALEVFEEM 398
Y L+ L + K L V++EM
Sbjct: 142 AYKLLLKRLSRFGKCGMLLNVWDEM 166
>gi|295831109|gb|ADG39223.1| AT5G43820-like protein [Capsella grandiflora]
Length = 169
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 111/168 (66%), Positives = 142/168 (84%)
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
L++S LIEGLGRAGRI+D++E+FD +K KG PD N YNA+I N+IS DFDE YY+
Sbjct: 1 LSYSHLIEGLGRAGRINDSVEIFDNIKHKGSVPDANVYNAMICNFISARDFDESXXYYRR 60
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M CEPN++TY++L+SGL+K RKV+DALE+FEEML RG +P+TG +TSFL+PLCSYGP
Sbjct: 61 MLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGFLPTTGLVTSFLKPLCSYGP 120
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
PHAAM++Y+K+RK GCK+S +AYKLLL+RLS FGKCGMLL++W EMQE
Sbjct: 121 PHAAMVIYQKSRKAGCKISESAYKLLLKRLSRFGKCGMLLNVWDEMQE 168
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 255 LFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
+F+++K K + + YN +I + E + ++ E P+ T+S L+ GL
Sbjct: 22 IFDNIKHKGSVPDANVYNAMICNFISARDFDESXXYYRRMLDEECEPNLETYSKLVSGLI 81
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+ ++ DA+E+F+ M +G P T + + S G M Y+ C+ +
Sbjct: 82 KGRKVSDALEIFEEMLSRGFLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCKISES 141
Query: 374 TYTRLISGLLKSRKVADALEVFEEM 398
Y L+ L + K L V++EM
Sbjct: 142 AYKLLLKRLSRFGKCGMLLNVWDEM 166
>gi|295831111|gb|ADG39224.1| AT5G43820-like protein [Neslia paniculata]
Length = 169
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 110/168 (65%), Positives = 144/168 (85%)
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
L++S LIEGLGRAGRI+D++E+FD ++ KG PD N YNA+I N+IS DFD M+YY+
Sbjct: 1 LSYSHLIEGLGRAGRINDSVEIFDNIRHKGNVPDANVYNAMICNFISARDFDGSMRYYRR 60
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M CEPN++TY++L+SGL+K RKV+DALE+FEEML RG++P+TG ITSFL+PLCSYGP
Sbjct: 61 MLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLITSFLKPLCSYGP 120
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
PHAAM++Y+K+RK GC++S +AYKLLL+RLS FGKCGMLL++W EMQE
Sbjct: 121 PHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQE 168
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 2/150 (1%)
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
+Y+ LI GL ++ ++ D++E+F+ + +G VP + + S +M Y++
Sbjct: 2 SYSHLIEGLGRAGRINDSVEIFDNIRHKGNVPDANVYNAMICNFISARDFDGSMRYYRRM 61
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY-PSDGEIYEYVIAGLCNIGQ 492
C+ +L Y L+ L K L+++ EM G P+ G I + + LC+ G
Sbjct: 62 LDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLITSF-LKPLCSYGP 120
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
A+++ ++S + G S Y L +L
Sbjct: 121 PHAAMVIYQKSRKAGCRISESAYKLLLKRL 150
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%)
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
R + ++ E P+ T+S L+ GL + ++ DA+E+F+ M +G P T + +
Sbjct: 56 RYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLITSFLKPL 115
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
S G M Y+ C + Y L+ L + K L V++EM
Sbjct: 116 CSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEM 166
>gi|295831103|gb|ADG39220.1| AT5G43820-like protein [Capsella grandiflora]
Length = 169
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 110/168 (65%), Positives = 141/168 (83%)
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
L++S LIEGLGRAG I+D++E+FD +K KG PD N YNA+I N+IS DFDE M YY+
Sbjct: 1 LSYSHLIEGLGRAGXINDSVEIFDNIKHKGSVPDANVYNAMICNFISARDFDESMXYYRR 60
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M CEPN++TY++L+SGL+K RKV+DALE+FEEML RG +P+TG +TSFL+PLCSYGP
Sbjct: 61 MLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGFLPTTGLVTSFLKPLCSYGP 120
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
PHAAM++Y+K+RK GCK+S +AYKLLL+RLS FGKCGMLL++W MQE
Sbjct: 121 PHAAMVIYQKSRKAGCKISESAYKLLLKRLSRFGKCGMLLNVWDXMQE 168
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 71/150 (47%), Gaps = 2/150 (1%)
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
+Y+ LI GL ++ + D++E+F+ + +G VP + + S +M Y++
Sbjct: 2 SYSHLIEGLGRAGXINDSVEIFDNIKHKGSVPDANVYNAMICNFISARDFDESMXYYRRM 61
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY-PSDGEIYEYVIAGLCNIGQ 492
C+ +L Y L+ L K L+++ EM G+ P+ G + + + LC+ G
Sbjct: 62 LDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGFLPTTGLVTSF-LKPLCSYGP 120
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
A+++ ++S + G S Y L +L
Sbjct: 121 PHAAMVIYQKSRKAGCKISESAYKLLLKRL 150
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 1/145 (0%)
Query: 255 LFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
+F+++K K + + YN +I + E + ++ E P+ T+S L+ GL
Sbjct: 22 IFDNIKHKGSVPDANVYNAMICNFISARDFDESMXYYRRMLDEECEPNLETYSKLVSGLI 81
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+ ++ DA+E+F+ M +G P T + + S G M Y+ C+ +
Sbjct: 82 KGRKVSDALEIFEEMLSRGFLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCKISES 141
Query: 374 TYTRLISGLLKSRKVADALEVFEEM 398
Y L+ L + K L V++ M
Sbjct: 142 AYKLLLKRLSRFGKCGMLLNVWDXM 166
>gi|255539258|ref|XP_002510694.1| hypothetical protein RCOM_1601600 [Ricinus communis]
gi|223551395|gb|EEF52881.1| hypothetical protein RCOM_1601600 [Ricinus communis]
Length = 243
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/235 (51%), Positives = 158/235 (67%), Gaps = 12/235 (5%)
Query: 1 MAFLSRFYRTRYPLSSLSSSFSLFSFSTSVRSNLSYNELLSN----QKKNMSSLDEHHVL 56
+ FL+R +TRY + L SS S F FST N + L S+ + N S++DE ++L
Sbjct: 9 LGFLTRLKKTRYLSTYLHSSISNFPFSTQ---NCQLDTLGSDPSLTKLNNQSNIDERYIL 65
Query: 57 KELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAV--DEFLLPEERLRGVFLQKLKGKG 114
+ELSDL IS S Y+ ++S + +R V D +L PE++LRGVFLQKLKGK
Sbjct: 66 RELSDLLPISHKASIARSYELNQST---KQSENRGVVADCYLSPEDKLRGVFLQKLKGKS 122
Query: 115 VIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALG 174
IE+AL + VDLS+DVV V++RGNL GEAM++FFNWAIK P + KD+ SYNV+++ALG
Sbjct: 123 AIENALGKIGVDLSIDVVANVLDRGNLGGEAMIIFFNWAIKQPTIPKDIHSYNVLIRALG 182
Query: 175 RRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGL 229
RRKF DF+ VL D+ E +N +LETLSIVMDS +RA QVYKAIQM G E L
Sbjct: 183 RRKFIDFVLKVLVDLKAEDINVNLETLSIVMDSLLRARQVYKAIQMFGNSESLDL 237
>gi|449533917|ref|XP_004173917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g43820-like, partial [Cucumis sativus]
Length = 146
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/146 (65%), Positives = 115/146 (78%)
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
F++ CSYGPPHAAM++YKKARKVGC++S AYKLLL RLS FGK GMLL++W+EMQESG
Sbjct: 1 FIQLSCSYGPPHAAMLIYKKARKVGCRISKNAYKLLLMRLSLFGKFGMLLNIWNEMQESG 60
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
Y D E YE+ I LC GQLENAVLVMEE LR+GF PSR SKL+NKLLA N+ E AY
Sbjct: 61 YDPDVETYEHAIDCLCKTGQLENAVLVMEECLRQGFFPSRRTRSKLNNKLLACNRTEMAY 120
Query: 533 NLFRKIKIARQNDYARRLWRSKGWHF 558
L+ KIK+AR + +R WR+KGWH+
Sbjct: 121 KLWLKIKVARHQENLQRCWRAKGWHY 146
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%)
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
G A+ ++ ++ GC NAY ++ G F + + M +P+++TY
Sbjct: 9 GPPHAAMLIYKKARKVGCRISKNAYKLLLMRLSLFGKFGMLLNIWNEMQESGYDPDVETY 68
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
I L K+ ++ +A+ V EE L +G PS T
Sbjct: 69 EHAIDCLCKTGQLENAVLVMEECLRQGFFPSRRT 102
>gi|356549210|ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Glycine max]
Length = 648
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 208/407 (51%), Gaps = 1/407 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L V LS D+V V+ R + + FF WA K P A D ++YN ++ LGR
Sbjct: 191 MEVVLDECGVRLSHDLVVDVLQRFKHARKPAFRFFCWAGKRPGFAHDSRTYNFMMCVLGR 250
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ F+ M +L +M ++G+ +ET SI + +F A Q KA+ + ++ +G K +
Sbjct: 251 TRQFETMVAMLEEMGEKGLL-TMETFSIAIKAFAEAKQRKKAVGIFDLMKKYGFKVGVDV 309
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
+N +L L A ++F +K + ++ TY I++SGW +L ++E RV E++
Sbjct: 310 INFLLDSLSTAKLGKEAQAVFEKLKDRFTPSLQTYTILLSGWCRLKNLLEAGRVWNEMID 369
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
GF+PD + + ++EGL + + DAI++F+ MK KG P+ +Y +I ++ E
Sbjct: 370 RGFNPDVVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGE 429
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
++Y+ M C+P+ YT LI+G + +K+ + +EM +RG P T + ++
Sbjct: 430 AIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIK 489
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
+ S P A+ +YKK + G K ++ Y ++++ M ++W EM + G
Sbjct: 490 LMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHQKGCCP 549
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
D Y I GL + A +EE L KG +L Y+K ++ +
Sbjct: 550 DDNSYIVYIGGLIRQDRSGEACKYLEEMLEKGMKAPKLDYNKFASDI 596
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 2/166 (1%)
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
TY ++ L ++R+ + + EEM ++G++ + T + ++ A+ ++
Sbjct: 240 TYNFMMCVLGRTRQFETMVAMLEEMGEKGLL-TMETFSIAIKAFAEAKQRKKAVGIFDLM 298
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
+K G K+ + LL LS K G E + + + Y +++G C + L
Sbjct: 299 KKYGFKVGVDVINFLLDSLST-AKLGKEAQAVFEKLKDRFTPSLQTYTILLSGWCRLKNL 357
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
A V E + +GF P + ++ + LL K A LF +K
Sbjct: 358 LEAGRVWNEMIDRGFNPDVVAHNVMLEGLLKCKKKSDAIKLFEIMK 403
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 192/402 (47%), Gaps = 1/402 (0%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
R + ++ FFNWA K ++YN +V G+ FD + M V+
Sbjct: 69 RHGIPVPQVLAFFNWASNQDGFRKSPEAYNEMVDFSGQVMMFDVAWYFIDLMKARNVDVT 128
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ET I+M ++RAG +AI R+ED+ K D + ++++ LC+ A F+
Sbjct: 129 VETFLILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRERRASQAQEFFD 188
Query: 258 SMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
S+K K +V+ Y ++ GW + G + E ERV E+ G P+ T+S +I+ L R G+
Sbjct: 189 SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQ 248
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
I A ++F M + GC P++ YN+++ ++ G ++ ++ Y M CEP+ TY
Sbjct: 249 ITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNF 308
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
LI K + DA++V M +G P+ T + + G +AA MYKK +++
Sbjct: 309 LIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELN 368
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
C+ + Y L++ M+L L EM E+ + Y+ +I C +G NA
Sbjct: 369 CEANTVTYNTLMKMFVASKSTDMVLKLKTEMDENKIEPNVNTYKVLITMYCGMGHWNNAY 428
Query: 498 LVMEESL-RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
E + K PS VY + +L + +L+ L K+
Sbjct: 429 KFFREMIDEKCLRPSLPVYDMVLQQLRKAGQLKKHEELVEKM 470
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 114/236 (48%), Gaps = 1/236 (0%)
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
TF L+ RAG +AI F+ M++ C PD A++ +IS + +++ +
Sbjct: 131 TFLILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRERRASQAQEFFDSL 190
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
EP++ YT L+ G ++ +++A VF EM GI P+ T + ++ LC G
Sbjct: 191 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQI 249
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A ++ + GC+ + Y L+R G+ +L ++++M+ G D Y ++
Sbjct: 250 TRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFL 309
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I C LE+A+ V+ +KG P+ ++ L + + +A+ +++K+K
Sbjct: 310 IETHCKDENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMK 365
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 131/268 (48%), Gaps = 5/268 (1%)
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
GN+S EA +F +K + +V +Y++++ +L R ++ ++M G P+
Sbjct: 212 GNIS-EAERVF--GEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNS 268
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
T + +M ++AG+ K +Q+ +++ G + D + N ++ C+ ++ A +
Sbjct: 269 ITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGL 328
Query: 259 MKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
M K N T+N + +KLG V R+ K++ +++T++ L++ +
Sbjct: 329 MAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKS 388
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC-EPNMDTYT 376
D +++ M E P+ N Y +I+ Y +G ++ K+++ M C P++ Y
Sbjct: 389 TDMVLKLKTEMDENKIEPNVNTYKVLITMYCGMGHWNNAYKFFREMIDEKCLRPSLPVYD 448
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIV 404
++ L K+ ++ E+ E+M+DRG V
Sbjct: 449 MVLQQLRKAGQLKKHEELVEKMVDRGFV 476
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 219/431 (50%), Gaps = 9/431 (2%)
Query: 115 VIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALG 174
++EDA V+ L ++V+ ++ N G ++ + FF WA K + +SYN +++ALG
Sbjct: 113 LLEDASIKVSPSLVVEVLKRLSNAGVIA----LSFFTWAEKQKGFKYNTESYNALIEALG 168
Query: 175 RRKFFDFMCNVLSDM-AKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA 233
+ K F + +++++M +++ +N D T +++ RA +V +AI+ R+E+FG K +
Sbjct: 169 KIKQFKLIRSLVNEMKSRKLLNKD--TFALISRRHARARKVEEAIEAFERMEEFGFKLET 226
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKE 292
N +L LC+ HV A+ +F+ MK + ++ +Y I++ GW K ++ ++ V E
Sbjct: 227 SDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKEHNLLRLDEVYLE 286
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+ +GF PD +T+ LI +A + D AIE+F M+ K C P + Y +I+ S
Sbjct: 287 MKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLINGLGSEKR 346
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
E +++++ S P TY L+ S ++ DA +V +EM P++ T
Sbjct: 347 LSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDI 406
Query: 413 FLEPLCSYGPPHAAMMMYKK-ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
L L + A ++K + + GC+ +++ Y++++R + + +W +M+
Sbjct: 407 ILHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAK 466
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G +Y +I LC+ +L A +E L G P ++S L LL K + A
Sbjct: 467 GVLPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAKMFSNLKQALLDEGKNDEA 526
Query: 532 YNLFRKIKIAR 542
NL RKI R
Sbjct: 527 LNLARKINKLR 537
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/254 (15%), Positives = 94/254 (37%), Gaps = 37/254 (14%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K+ DV +Y +++ A + K +D + +M + P +++ +
Sbjct: 287 MKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLINGLGSEKR 346
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK----------- 262
+ +A++ R + G +A + N ++ C + + A + + M+
Sbjct: 347 LSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDI 406
Query: 263 VLFN--------------------------VMTYNIVISGWSKLGQVVEMERVLKEIVAE 296
+L + V TY I++ + +V ++V ++ A+
Sbjct: 407 ILHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAK 466
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
G P +S LI L ++ +A + F M + G P ++ + + G DE
Sbjct: 467 GVLPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAKMFSNLKQALLDEGKNDEA 526
Query: 357 MKYYKGMSSYNCEP 370
+ + ++ P
Sbjct: 527 LNLARKINKLRGTP 540
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 184/382 (48%), Gaps = 1/382 (0%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FFNWA P + YN ++ G+ + FD V+ M V +ET SI++ +
Sbjct: 128 FFNWATSRPGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRY 187
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM 268
+RAG +A+ R+ED+ K D + ++++ LC++ A S F+S+K K +V+
Sbjct: 188 VRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDKFEPDVI 247
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
Y ++ GW + G + E ERV E+ G P+ T++ +I+ L R G+I A +VF M
Sbjct: 248 VYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEM 307
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ GC P++ +N ++ ++ G ++ ++ Y M C P+ TY LI K +
Sbjct: 308 LDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNL 367
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+AL+V M+ +G P+ T + + A +Y K +++ CK + Y +L
Sbjct: 368 DEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNIL 427
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL-RKG 507
+R M+L L EM E + Y +IA C +G NA E + K
Sbjct: 428 MRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKC 487
Query: 508 FCPSRLVYSKLSNKLLASNKLE 529
PS VY K+ +L + +L+
Sbjct: 488 LKPSLPVYEKVLQQLRKAGQLK 509
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 1/236 (0%)
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
TFS LI RAG +A+ F+ M++ C PD A++ +IS E ++ +
Sbjct: 179 TFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSL 238
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
EP++ YT L+ G ++ + +A VF EM G +P+ T T ++ LC G
Sbjct: 239 KD-KFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQI 297
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A ++ + VGC+ + + LLR G+ +L ++++M+ G P D Y ++
Sbjct: 298 TRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFL 357
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I C G L+ A+ V+ ++KG P+ ++ L + + A+ L+ K+K
Sbjct: 358 IESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMK 413
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 143/325 (44%), Gaps = 51/325 (15%)
Query: 121 WNVNVD-LSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFF 179
+N D ++ ++ ++ R + EA F + K DV Y +V+ R
Sbjct: 206 YNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDK---FEPDVIVYTNLVRGWCRAGNI 262
Query: 180 DFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVV 239
V ++M G P++ T +IV+D+ R GQ+ +A + + D G + ++ + N +
Sbjct: 263 PEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNL 322
Query: 240 LWCLCQRLHVGAASS-----LFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
L R+HV A + ++N MK + +TYN +I K G + E +VL +
Sbjct: 323 L-----RVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSM 377
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
V +G SP++ TF+ L + + ++ A ++ MKE C +T YN ++ ++
Sbjct: 378 VKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKST 437
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLIS----------------GLLKSRKVADALEVFEE 397
D +K K M + EPN++TY LI+ +++ + + +L V+E+
Sbjct: 438 DMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEK 497
Query: 398 --------------------MLDRG 402
M+DRG
Sbjct: 498 VLQQLRKAGQLKKHEELVAVMVDRG 522
>gi|224128340|ref|XP_002320305.1| predicted protein [Populus trichocarpa]
gi|222861078|gb|EEE98620.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 219/426 (51%), Gaps = 1/426 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L ++LS D+V +V+ R + + FF WA + P D ++Y+ ++ L +
Sbjct: 93 MEAVLDECGINLSHDLVIEVLERFRHARKPAFRFFCWAAEKPGFVHDSRTYHSMMIILAK 152
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ F+ M ++L +M ++ + L+T SI M +F A + KA+ + +++ + E+
Sbjct: 153 ARQFETMMSMLEEMGEKRL-LTLDTFSIAMRAFAAAKERKKAVGIFELMKNHKYRVGVET 211
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
+N +L L + A +LF ++G+ N+ TY ++++GW ++ ++E R+ E++
Sbjct: 212 INALLDSLGRAKLGKEAQALFGKLEGRFTPNLRTYTVLLNGWCRVKNLMEAGRIWNEMLD 271
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
EGF PD +T + ++EGL R+ + DAI+ F+ MK KG PD +Y +I + E
Sbjct: 272 EGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMKE 331
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+ Y+ M C P+ YT L++G +++ E+ +EM ++G P T + ++
Sbjct: 332 AVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIK 391
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
+ S P A+ +YKK + G + S+ +Y ++++ M +W EM + G+
Sbjct: 392 LMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGFCP 451
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
D Y I GL + G+ E A +EE + KG +L Y+K + + K + L
Sbjct: 452 DDNSYTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELA 511
Query: 536 RKIKIA 541
+K+K +
Sbjct: 512 QKMKFS 517
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 142/312 (45%), Gaps = 4/312 (1%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEG-VNPDLETLSIVMDSFIRAGQVYKAIQML 221
V++ N ++ +LGR K + + EG P+L T +++++ + R + +A ++
Sbjct: 209 VETINALLDSLGRAKLGKEAQALFGKL--EGRFTPNLRTYTVLLNGWCRVKNLMEAGRIW 266
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ D G K D + N++L L + A F MK K +V +Y I+I K
Sbjct: 267 NEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDVRSYTILIRDLCKQ 326
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
++ E E+V G PD+ ++ L+ G G R+D E+ MKEKGC PD Y
Sbjct: 327 TKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTY 386
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
NA+I S D+ ++ YK M EP++ +Y ++ + R V++EM
Sbjct: 387 NALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSK 446
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G P + T F+ L S G A ++ + G K Y S GK +
Sbjct: 447 KGFCPDDNSYTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDI 506
Query: 461 LLDLWHEMQESG 472
L +L +M+ SG
Sbjct: 507 LEELAQKMKFSG 518
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 221/430 (51%), Gaps = 3/430 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
IE L ++LS ++ +V+ + + +G + FF WA K +SYN++++ALG+
Sbjct: 109 IESLLDGAPMELSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGK 168
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
K F+ + N++SDM ++G+ ET +++ + RA +V +A++ ++E FG +
Sbjct: 169 IKQFNVIWNLVSDMKRKGI-LSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSD 227
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
N +L LC+ +V A +F+ MK G+ ++ +Y I++ GW + ++++ V +E+
Sbjct: 228 FNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMR 287
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
EGF PD +TF LI +A + D+AI +F M+ K P + + +I+ S
Sbjct: 288 DEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLK 347
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E +++++ + P TY ++ S K+A A + +EM G+ P++ T L
Sbjct: 348 EALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIIL 407
Query: 415 EPLCSYGPPHAAMMMYKK-ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
L A ++++ +R+ GC+ +L+ Y +++R + M + +W EM+ G
Sbjct: 408 HHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGV 467
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
++ +I LC+ +LE+A +E L G P ++S L LL + ++A
Sbjct: 468 LPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALL 527
Query: 534 LFRKIKIARQ 543
+ KIK R+
Sbjct: 528 MAEKIKKLRK 537
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 221/440 (50%), Gaps = 10/440 (2%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
FL ++ G+G+ DA+ ++ L +G++ EA LF ++ DV +
Sbjct: 255 FLSEMVGRGIPPDAITYNSIVHGLCCLGQL-------NEATRLF--KRMEQNGCKPDVVT 305
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN+I+ +L + + + + LS+M +G+ PD+ T + ++ GQ+ +AI++ ++E
Sbjct: 306 YNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKME 365
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
G K D + N ++ LC+ V A + M + + N +TY+ ++ G+ LGQ+
Sbjct: 366 QKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLD 425
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E ++ KE+V P++LTFS L++GL + G + +A VF+TM EKG P+ YNA++
Sbjct: 426 EATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALM 485
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ Y +E K ++ M C P++ +Y LI+G SR++ A + +M + +
Sbjct: 486 NGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLT 545
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P+T T + ++ LC G A ++KK G +L Y +LL L G L L
Sbjct: 546 PNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKL 605
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+ M+E D +Y +I G+ G+LE A + + G P Y+ + LL
Sbjct: 606 FKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLK 665
Query: 525 SNKLESAYNLFRKIKIARQN 544
+ AY LFRK K+ + N
Sbjct: 666 EGLSDEAYELFRKWKMMKHN 685
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 191/396 (48%), Gaps = 3/396 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ F+ A +P + + + ++ + K + + + + M GV + +L+I
Sbjct: 76 DALASFYRMARMNPR--PSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
+++ R V A+ + G++ G++ D + ++ +C + A L+N M +
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+V++YN +I+G G V K++ G P+ +T++ +I+ L + ++DA+
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+ M +G PD YN+++ +G +E + +K M C+P++ TY +I L
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K R V DA + EM+D+GI P T T+ L LC G + A+ ++KK + GCK +
Sbjct: 314 YKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDV 373
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
AY ++ L ++ EM + G P + Y ++ G CN+GQL+ A + +E
Sbjct: 374 VAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKE 433
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ + P+ L +S L + L + A +F +
Sbjct: 434 MVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETM 469
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 91/194 (46%), Gaps = 3/194 (1%)
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
SN ISV D+ + + M+ N P++ + + + + K ++ + + + +M G+
Sbjct: 69 SNTISV---DDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVT 125
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
+ ++ + LC A+ ++ K K+G + + + L+ + GK + ++L
Sbjct: 126 HTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVEL 185
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
++EM SG+ D Y +I GLCN G AV V ++ + G P+ + Y+ + + L
Sbjct: 186 YNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCK 245
Query: 525 SNKLESAYNLFRKI 538
+ A + ++
Sbjct: 246 DRLVNDAMDFLSEM 259
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%)
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
V DAL F M PS FL + + + + G ++ + +
Sbjct: 74 VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L+ L + +W +M + G D + +I G+CN G+++ AV + E +R G
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P + Y+ L N L S A ++F+K++
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKME 225
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 220/430 (51%), Gaps = 3/430 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
IE L ++LS ++ +V+ + + +G + FF WA K +SYN++++ALG+
Sbjct: 109 IESLLDGAPMELSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGK 168
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
K F+ + N++SDM ++G+ ET +++ + RA +V +A++ ++E FG +
Sbjct: 169 IKQFNVIWNLVSDMKRKGI-LSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSD 227
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
N +L LC+ +V A +F+ MK G+ ++ +Y I++ GW + ++++ V +E+
Sbjct: 228 FNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMR 287
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
EGF PD +TF LI +A + D+AI +F M+ K P + + +I+ S
Sbjct: 288 DEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLK 347
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E +++++ + P TY ++ S K+A A + +EM G+ P++ T L
Sbjct: 348 EALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIIL 407
Query: 415 EPLCSYGPPHAAMMMYKK-ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
L A ++++ +R+ GC+ +L+ Y +++R + M + +W EM+ G
Sbjct: 408 HHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGV 467
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
++ +I LC+ +LE+A +E L G P ++S L LL + ++A
Sbjct: 468 LPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALL 527
Query: 534 LFRKIKIARQ 543
+ KI R+
Sbjct: 528 MAEKIXKLRK 537
>gi|449454008|ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
gi|449490811|ref|XP_004158714.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
Length = 621
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 215/426 (50%), Gaps = 1/426 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L V LS D+V +V+ R + + FF WA + P A D K+YN ++ LG+
Sbjct: 162 MEAVLDECGVKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGK 221
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ F+ M ++L +MA++ + +ET ++ +F A + KA+ +L ++ + K E+
Sbjct: 222 TRQFETMVSLLEEMAEKEL-LTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVET 280
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
+N +L L + A ++F + G+ N+ TY ++++GW ++ ++E ++ +++
Sbjct: 281 INCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMID 340
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
E F PD + + ++EGL R + DAI++F+ MK KG PD +Y ++ ++ E
Sbjct: 341 EDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKE 400
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
++Y++ M C P+ YT LI+G +++ + +EM G P T + ++
Sbjct: 401 AVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIK 460
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
+ + P A+ +YKK + G K + Y ++++ M + W EM+ G
Sbjct: 461 LMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCP 520
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
D Y I GL ++G+ A +EE + KG +L Y+K + + + + L
Sbjct: 521 DDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELA 580
Query: 536 RKIKIA 541
+K+K +
Sbjct: 581 QKMKFS 586
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 140/311 (45%), Gaps = 2/311 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V++ N ++ +LGR K + + P+L+T +++++ + R + +A ++
Sbjct: 278 VETINCLLDSLGRAKLGKEALTIFEKLHGR-FTPNLQTYTVLLNGWCRVRNLMEAGKIWN 336
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
++ D K D + N +L L + A LF MK K +V +Y I++ + K
Sbjct: 337 QMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQA 396
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ E + +E+ G PD+ ++ LI G G R+D + MK GC PD YN
Sbjct: 397 KMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYN 456
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A+I + D+ ++ YK M +P TY+ ++ ++R + ++EM +
Sbjct: 457 ALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLK 516
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G P + T F+ L S G A ++ + G K Y S G+ +L
Sbjct: 517 GCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDIL 576
Query: 462 LDLWHEMQESG 472
+L +M+ SG
Sbjct: 577 EELAQKMKFSG 587
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 159/409 (38%), Gaps = 91/409 (22%)
Query: 4 LSRFYRTRYPLSSLSSSFSLFSFSTS----VRSNLSYNELLS-----NQKKNMSSLDEHH 54
L+RF + R P +F F ++ + +YN +++ Q + M SL E
Sbjct: 182 LARFKQARKP------AFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEM 235
Query: 55 VLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGV----FLQKL 110
KEL + +F +K F +ER + V ++K
Sbjct: 236 AEKELLTM------ETFTVCFKA-----------------FAAAKERKKAVGVLELMKKY 272
Query: 111 KGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIV 170
K K +E ++ LD +G R L EA+ +F H ++++Y V++
Sbjct: 273 KYKVGVE------TINCLLDSLG----RAKLGKEALTIFEKL---HGRFTPNLQTYTVLL 319
Query: 171 KALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLK 230
R + + + M E PD+ + +++ +R + AI++ ++ G
Sbjct: 320 NGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPS 379
Query: 231 FDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERV 289
D +S +++ C++ + A F M+G + Y +I+G+ ++ + +
Sbjct: 380 PDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGL 439
Query: 290 LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF------------------------ 325
LKE+ A G PD T++ LI+ + DDA+ ++
Sbjct: 440 LKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQ 499
Query: 326 -----------DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
D MK KGC PD N+Y I IS+G E KY + M
Sbjct: 500 TRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEM 548
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 220/433 (50%), Gaps = 3/433 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
IE L + +S +V +V+ R + +G + FF WA K + +SYN ++ +LG+
Sbjct: 100 IEKLLLGASFKVSPALVLEVLKRLSNAGALALSFFKWAEKQKGFMYNTESYNALIDSLGK 159
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
K F+ + N+++DM ++GV ET +++ + R+G+V +A+ ++E FGLK ++
Sbjct: 160 IKQFNMIWNLVNDMKRKGVLTK-ETFALISRRYARSGKVKEAMNTFEKMEKFGLKIESTD 218
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
N +L L + V +A ++F+ MK + + ++ +Y I++ GW + +++++ V +E+
Sbjct: 219 FNRLLDTLIKSRQVLSAQNVFDKMKIRRFVPDIKSYTILLEGWGQEKNLLKLDEVYREMK 278
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
EGF PD +T+ LI + + DDAIE+F M+ K C P + + +I+ SV
Sbjct: 279 DEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSVRRLS 338
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E +++++ + P TY ++ S ++ DA + +EM G+ P++ T L
Sbjct: 339 EALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSRTYDIIL 398
Query: 415 EPLCSYGPPHAAMMMYKK-ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
L A +++K + + C+ +++ Y +++R K + +W M+ G
Sbjct: 399 HHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAIKVWDRMKAKGV 458
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
++ +I LC+ +L+ A +E L G P ++S L L+ + ++
Sbjct: 459 HPGMHMFSILINSLCHENKLDIACKYFQEMLDVGIRPPAALFSHLKQALIEDGRKDTVVL 518
Query: 534 LFRKIKIARQNDY 546
L +KI R+ Y
Sbjct: 519 LAQKIDKLRKTPY 531
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 191/395 (48%), Gaps = 2/395 (0%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FFNWA + YN ++ G+ + FD +++ M GV + T S+++ +
Sbjct: 129 FFNWATTLEGFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRY 188
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM 268
+RAG +A+ R+ED+G K D S ++V+ LC++ A F+S+K K +V+
Sbjct: 189 VRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHKFEPDVI 248
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
Y ++ GW + G + + E V ++ G P+ T+S +I+ L R G+I A +VF M
Sbjct: 249 VYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEM 308
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ GC P+ +N+++ ++ G ++ ++ Y M C + +Y LI K +
Sbjct: 309 IDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENL 368
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A++V + M+ +G+ P+ T S + + A MY K +++ C + Y +L
Sbjct: 369 DEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNIL 428
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL-RKG 507
+R + M+L L EM ES + Y +I C G NA +M+E + K
Sbjct: 429 MRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKC 488
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
P+ +Y + L + +L+ L K+ +AR
Sbjct: 489 LKPNLSIYETVLELLRNAGQLKKHEELVEKM-VAR 522
>gi|356561933|ref|XP_003549231.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g62470, mitochondrial-like [Glycine max]
Length = 510
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 204/407 (50%), Gaps = 1/407 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L V LS D+V V+ R + + FF A K P A D ++YN ++ LGR
Sbjct: 53 MEVVLDECGVRLSHDLVVDVLQRFKHARKPAFRFFCXAGKRPGFAHDSRTYNFMMCVLGR 112
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ F+ M L +M ++G+ +ET SI + +F A Q K + + ++ +G K +
Sbjct: 113 TRQFETMVAKLEEMGEKGL-LTMETFSIAIKAFAEAKQRKKEVGIFDLMKKYGFKVGVDV 171
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
+N +L L A ++F +K + ++ TY I++SGW +L ++E RV E++
Sbjct: 172 INFLLDSLSTAKLGKEAQAVFEKLKDRFTPSLQTYTILLSGWCRLKNLLEAGRVWNEMID 231
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
GF+PD + + ++EGL + + DAI++F+ MK KG P+ +Y +I ++ E
Sbjct: 232 RGFNPDIVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGE 291
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
++Y+ M C+P+ YT LI+G + +K+ + +EM +RG P T + ++
Sbjct: 292 AIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIK 351
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
+ S P A+ +YKK + G K ++ Y ++++ M ++W EM G
Sbjct: 352 LMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHPKGCCP 411
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
D Y I GL + A +EE L KG +L Y+K ++ +
Sbjct: 412 DDNSYIVYIGGLIRQDRSGEACKYLEEMLEKGMKALKLDYNKFASDI 458
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 213/429 (49%), Gaps = 3/429 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
IE L +VD+S +V +V+ + + SG + FF WA K ++YN +++ALG+
Sbjct: 98 IESLLNGASVDVSPTLVLEVLKKLSNSGVIALSFFRWAEKQKGFKYSTENYNALIEALGK 157
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
K F + N+++DM +G+ ET +++ + RA +V +A++ ++E FGL+
Sbjct: 158 IKQFKMIWNLVNDMRSKGLLTQ-ETFALISRRYARARKVKEAVETFEKMEKFGLQPVLSD 216
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
N +L LC+ HV A +F+ MK K ++ +Y I++ GW + ++ ++ V +E+
Sbjct: 217 FNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLRLDEVYREMK 276
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
EGF PD++T+ LI +A R D A+E+F M+ C P + Y +I+ S
Sbjct: 277 DEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRLT 336
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E +++++ + P TY ++ +S ++ DA + +EM G+ P T T L
Sbjct: 337 EALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDIIL 396
Query: 415 EPLCSYGPPHAAMMMYK-KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
L A +++ + + GC+ S++ Y++++R + M L +W EM+ G
Sbjct: 397 HHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKGV 456
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
++ +I LC +L+ A E L G P ++S L LL K +
Sbjct: 457 LPGMHMFSTLINSLCYENKLDEACKYFHEMLDMGIRPPAAMFSNLKQTLLDEGKQDMVLI 516
Query: 534 LFRKIKIAR 542
L +K+ R
Sbjct: 517 LAQKLDKIR 525
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 214/451 (47%), Gaps = 7/451 (1%)
Query: 90 RAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLF 149
R DEF + E++ + + +E AL V + + +V++R +G F
Sbjct: 68 RDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVIMRSGLPERVLSRCGDAGNLGYRF 127
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL---ETLSIVMD 206
F WA K P + Y ++K LG+ + F + ++ +M KE NP + E ++M
Sbjct: 128 FVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKE--NPYMLTPEVFIVLMR 185
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN 266
F V KA+++L + +G + D +L LC+ V A+SLF M+ + N
Sbjct: 186 RFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPN 245
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
+ + ++ GW + G+++E + VL +I GF PD + ++ L+ G +AG++ DA ++
Sbjct: 246 LRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLA 305
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
MK+ CGP+ ++ +I ++ DE M+ + M CE ++ TYT LISG K
Sbjct: 306 EMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWG 365
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
A E+ ++M+ +G PS + + M + ++ RK+GC L Y
Sbjct: 366 NTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYN 425
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
++R + G + LW EMQ G + Y ++ G + G L A +E + +
Sbjct: 426 TMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVER 485
Query: 507 GF--CPSRLVYSKLSNKLLASNKLESAYNLF 535
G P +L+N LL + KLE A N++
Sbjct: 486 GLLSAPQYGTLKELTNALLRAEKLEMAKNMW 516
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 141/288 (48%), Gaps = 7/288 (2%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
+VL + + G PD+ + ++ + +AG++ A +L ++ +A S +++
Sbjct: 267 HVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSF 326
Query: 244 CQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C+ + A +F M+G +V+TY +ISG+ K G + +L +++ +G P
Sbjct: 327 CKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQ 386
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
L++ ++ + +++ +E+ + M++ GC PD N YN +I +GD E ++ +
Sbjct: 387 LSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGE 446
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV--PSTGTITSFLEPLCSY 420
M + P +DTY ++ G L + +A + F+EM++RG++ P GT+ L
Sbjct: 447 MQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRA 506
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK----CGMLLDL 464
A M+ GC+L+++A+ + + L G C LD+
Sbjct: 507 EKLEMAKNMWSCMTTKGCELNVSAWTIWIHALFSNGHVKEACSYCLDM 554
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 119/274 (43%), Gaps = 8/274 (2%)
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT---FSFLIEGLGRAGRIDDAIEVFD 326
Y +I K+ Q + +++E+ E +P LT F L+ + A+EV D
Sbjct: 144 YKAMIKTLGKMRQFGAVWALIEEMRKE--NPYMLTPEVFIVLMRRFASVRMVKKAVEVLD 201
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS-SYNCEPNMDTYTRLISGLLKS 385
M + GC PD + ++ G E ++ M +N PN+ +T L+ G +
Sbjct: 202 EMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFN--PNLRHFTSLLYGWCRE 259
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
K+ +A V ++ + G P + L G A + + +KV C + ++
Sbjct: 260 GKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASF 319
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+L++ K + ++ EMQ SG +D Y +I+G C G + A ++++ ++
Sbjct: 320 TILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQ 379
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
KG PS+L Y + +LE L +++
Sbjct: 380 KGHDPSQLSYLCIMMAHEKKEELEECMELIEEMR 413
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 125/301 (41%), Gaps = 4/301 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K N + S+ +++++ + + D + ++M G D+ T + ++ F + G
Sbjct: 307 MKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGN 366
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
KA ++L + G S ++ ++ + L M K + ++ YN
Sbjct: 367 TDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNT 426
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I KLG + E R+ E+ A G +P T+ ++ G G + +A + F M E+G
Sbjct: 427 MIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERG 486
Query: 333 --CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
P + + + + + M++ CE N+ +T I L + V +
Sbjct: 487 LLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVSAWTIWIHALFSNGHVKE 546
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A +M+D ++P T + L A+ + +K RK+ +T +K+ R
Sbjct: 547 ACSYCLDMMDADLMPQPDTFAKLMRGLKKLFHRQLAVEITEKVRKMAADRQIT-FKMYKR 605
Query: 451 R 451
R
Sbjct: 606 R 606
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 209/432 (48%), Gaps = 38/432 (8%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA +LF +K DV SY+ ++ +LGR ++ V+++M +G P+L T +
Sbjct: 27 EAQLLFEE--LKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNT 84
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--- 260
++D +AGQ +A+++L + D G D + N ++ L + + A +LF M+
Sbjct: 85 LVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERG 144
Query: 261 ---------------GKV------------------LFNVMTYNIVISGWSKLGQVVEME 287
GKV +VMTY+ +I+G K G+ V+
Sbjct: 145 CVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAF 204
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
++ +E+ G PDS+TF+ L++ LG+AGR+DDA+E+ D MKE+G P YNA+I+ +
Sbjct: 205 KLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGF 264
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
VGD E M C+P++ TY+ LI+GL+K+ ++ +A +V ++M G P T
Sbjct: 265 GKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDT 324
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T + + L G + A ++ + + GC + Y L+ L + L+ E
Sbjct: 325 ITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEE 384
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
M+ G D Y +I L GQ+++A + E KG P + Y+ N L +
Sbjct: 385 MESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGR 444
Query: 528 LESAYNLFRKIK 539
+ A +F +K
Sbjct: 445 FKEARKIFEDMK 456
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 213/439 (48%), Gaps = 12/439 (2%)
Query: 99 EERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPN 158
+E LR L +++ G + D + + +GK G LS EA LF ++
Sbjct: 96 DEALR--LLAEMRDNGCVPDVR---TYNCLISTLGKA---GRLS-EAFTLFAE--MRERG 144
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
D +YN ++ LG+ +L +M + G PD+ T S ++ + G+ KA
Sbjct: 145 CVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAF 204
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ ++ G K D+ + ++ L + V A L + MK + V V+TYN +I+G+
Sbjct: 205 KLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGF 264
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K+G +VE +L E+ G PD +T+S LI GL +A ++D+A +V M+++GC PDT
Sbjct: 265 GKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDT 324
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I+ G ++ + + M S C P++ TY+ LI+ L K+ +V A +FEE
Sbjct: 325 ITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEE 384
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M GI P T S + L G A ++ + R G + Y L L G+
Sbjct: 385 MESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGR 444
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
++ +M+ESG D Y+ ++ GL ++++A +++E + +G L + +
Sbjct: 445 FKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDE 504
Query: 518 LSNKLLASNKLESAYNLFR 536
L + ++ A+ L +
Sbjct: 505 CLEILTSWGNVDEAHELLQ 523
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 180/349 (51%), Gaps = 7/349 (2%)
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
+P++ T + ++++ +AGQ +A + L+ D S + ++ L + AA
Sbjct: 6 SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65
Query: 255 LFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
+ M+ K N+ TYN ++ K GQ E R+L E+ G PD T++ LI LG
Sbjct: 66 VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+AGR+ +A +F M+E+GC PDT YN++I VG + M+ + M + C P++
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
TY+ LI+GL K + A ++F+EM RG P + T T+ ++ L G A+ + +
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNI 490
++ G K + Y L ++GFGK G L++ L EM+ +G D Y +I GL
Sbjct: 246 KERGVKPGVVTYNAL---IAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKA 302
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
QL+ A V+++ ++G P + Y+ L N L + L A LF ++K
Sbjct: 303 SQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMK 351
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 135/512 (26%), Positives = 235/512 (45%), Gaps = 33/512 (6%)
Query: 17 LSSSFSLFSF---STSVRSNLSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPN 73
LS +F+LF+ V +YN L+ K S +L+E+ H P+
Sbjct: 130 LSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEME------RHGCPPD 183
Query: 74 V--YKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDV 131
V Y + K ++ +A F Q++K +G D++ + +L
Sbjct: 184 VMTYSSLITGLGKDGETVKAFKLF------------QEMKRRGRKPDSITFTALMDALGK 231
Query: 132 VGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAK 191
G+V + L E +K V V +YN ++ G+ N+L +M +
Sbjct: 232 AGRVDDALELLDE---------MKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKR 282
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
G PD+ T S ++ I+A Q+ +A Q+L ++E G D + N ++ L + +
Sbjct: 283 NGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLND 342
Query: 252 ASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A LF+ MK K +V+TY+ +I+ K +V + +E+ + G PD T+ +I
Sbjct: 343 AGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIIT 402
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
LG+AG++DDA +F M+ KG PD YNA +++ G F E K ++ M P
Sbjct: 403 VLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLP 462
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
++ TY L+ GL K+++V DA + +E++++G + LE L S+G A +
Sbjct: 463 DVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELL 522
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
+ A G ++Y L+ L+ G+ + +++E G D Y +I+ L
Sbjct: 523 QFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQT 582
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
GQ++ A ++EE ++G S YS L KL
Sbjct: 583 GQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 191/379 (50%), Gaps = 1/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y+ ++ LG+ + +M + G PD T + +MD+ +AG+V A+++L
Sbjct: 183 DVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELL 242
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
+++ G+K + N ++ + + A +L + MK +V+TY+ +I+G K
Sbjct: 243 DEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKA 302
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
Q+ E +VLK++ EG PD++T++ LI GLG+AG ++DA +FD MK KGC PD Y
Sbjct: 303 SQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTY 362
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +I+ + ++ M S +P++ TY +I+ L K+ +V DA +F EM
Sbjct: 363 STLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRG 422
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G+ P T +FL L G A +++ ++ G + Y LL LS +
Sbjct: 423 KGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDD 482
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L E+ E G D ++ + L + G ++ A +++ + KG P Y+ L +
Sbjct: 483 ACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALID 542
Query: 521 KLLASNKLESAYNLFRKIK 539
L + ++ A+N +K
Sbjct: 543 ALAKAGRVSEAFNTLEDLK 561
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 146/281 (51%)
Query: 259 MKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
MKG NV+TYN +++ +K GQ E + + +E+ A ++PD +++S LI LGRAG+
Sbjct: 1 MKGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKW 60
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
+ A+EV M+ KGC P+ YN ++ G FDE ++ M C P++ TY L
Sbjct: 61 EAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCL 120
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
IS L K+ ++++A +F EM +RG VP T T S + L G AM + ++ + GC
Sbjct: 121 ISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGC 180
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ Y L+ L G+ L+ EM+ G D + ++ L G++++A+
Sbjct: 181 PPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALE 240
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+++E +G P + Y+ L L AYNL ++K
Sbjct: 241 LLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMK 281
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 214/451 (47%), Gaps = 7/451 (1%)
Query: 90 RAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLF 149
R DEF + E++ + + +E AL V + + +V++R +G F
Sbjct: 91 RDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVIMRSGLPERVLSRCGDAGNLGYRF 150
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL---ETLSIVMD 206
F WA K P + Y ++K LG+ + F + ++ +M KE NP + E ++M
Sbjct: 151 FVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKE--NPYMLTPEVFIVLMR 208
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN 266
F V KA+++L + +G + D +L LC+ V A+SLF M+ + N
Sbjct: 209 RFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPN 268
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
+ + ++ GW + G+++E + VL +I GF PD + ++ L+ G +AG++ DA ++
Sbjct: 269 LRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLA 328
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
MK+ CGP+ ++ +I ++ DE M+ + M CE ++ TYT LISG K
Sbjct: 329 EMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWG 388
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
A E+ ++M+ +G PS + + M + ++ RK+GC L Y
Sbjct: 389 NTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYN 448
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
++R + G + LW EMQ G + Y ++ G + G L A +E + +
Sbjct: 449 TMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVER 508
Query: 507 GF--CPSRLVYSKLSNKLLASNKLESAYNLF 535
G P +L+N LL + KLE A N++
Sbjct: 509 GLLSAPQYGTLKELTNALLRAEKLEMAKNMW 539
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 141/288 (48%), Gaps = 7/288 (2%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
+VL + + G PD+ + ++ + +AG++ A +L ++ +A S +++
Sbjct: 290 HVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSF 349
Query: 244 CQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C+ + A +F M+G +V+TY +ISG+ K G + +L +++ +G P
Sbjct: 350 CKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQ 409
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
L++ ++ + +++ +E+ + M++ GC PD N YN +I +GD E ++ +
Sbjct: 410 LSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGE 469
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV--PSTGTITSFLEPLCSY 420
M + P +DTY ++ G L + +A + F+EM++RG++ P GT+ L
Sbjct: 470 MQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRA 529
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK----CGMLLDL 464
A M+ GC+L+++A+ + + L G C LD+
Sbjct: 530 EKLEMAKNMWSCMTTKGCELNVSAWTIWIHALFSNGHVKEACSYCLDM 577
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 119/275 (43%), Gaps = 8/275 (2%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT---FSFLIEGLGRAGRIDDAIEVF 325
Y +I K+ Q + +++E+ E +P LT F L+ + A+EV
Sbjct: 166 VYKAMIKTLGKMRQFGAVWALIEEMRKE--NPYMLTPEVFIVLMRRFASVRMVKKAVEVL 223
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS-SYNCEPNMDTYTRLISGLLK 384
D M + GC PD + ++ G E ++ M +N PN+ +T L+ G +
Sbjct: 224 DEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFN--PNLRHFTSLLYGWCR 281
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
K+ +A V ++ + G P + L G A + + +KV C + +
Sbjct: 282 EGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAAS 341
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
+ +L++ K + ++ EMQ SG +D Y +I+G C G + A ++++ +
Sbjct: 342 FTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMI 401
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+KG PS+L Y + +LE L +++
Sbjct: 402 QKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMR 436
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 125/301 (41%), Gaps = 4/301 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K N + S+ +++++ + + D + ++M G D+ T + ++ F + G
Sbjct: 330 MKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGN 389
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
KA ++L + G S ++ ++ + L M K + ++ YN
Sbjct: 390 TDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNT 449
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I KLG + E R+ E+ A G +P T+ ++ G G + +A + F M E+G
Sbjct: 450 MIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERG 509
Query: 333 --CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
P + + + + + M++ CE N+ +T I L + V +
Sbjct: 510 LLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVSAWTIWIHALFSNGHVKE 569
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A +M+D ++P T + L A+ + +K RK+ +T +K+ R
Sbjct: 570 ACSYCLDMMDADLMPQPDTFAKLMRGLKKLFHRQLAVEITEKVRKMAADRQIT-FKMYKR 628
Query: 451 R 451
R
Sbjct: 629 R 629
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 198/413 (47%), Gaps = 6/413 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L + ++ +V +V+ R G + FF WA + P +SY+++V LG
Sbjct: 67 LERPLTAFSQKITPGLVEQVLKRCKNLGFSAHRFFLWAKRLPGFEHSKESYHILVDILGS 126
Query: 176 RKFFDFMCNVLSDMAKE---GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
K F + + LSDM + + P E ++ ++ RA AI+ ++ DFG+K
Sbjct: 127 SKQFPLIWDFLSDMRETRCCEICP--EIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAG 184
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
++ +L+ LC+R HV A F+ + +V+ N TY+I++ GW +G E ++ +E
Sbjct: 185 VGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEE 244
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+ G + D + ++ L+E L + G +D+A ++F M G PD +Y+ I Y V D
Sbjct: 245 MRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVND 304
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
+ M YN PN+ TY ++ L KS KV +A ++ +EM++RG+ P + +
Sbjct: 305 IHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNA 364
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
C + + A+ + + K C Y ++L+ L G+ + D+W M+E G
Sbjct: 365 IQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERG 424
Query: 473 YPSDGEIYEYVIAGLC-NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+ Y ++ G C G+LE A E + G P L N+++
Sbjct: 425 FYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIG 477
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 97/228 (42%), Gaps = 1/228 (0%)
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
L+ L + + A E FD + + P+ Y+ ++ + VGD E K ++ M
Sbjct: 191 LLYVLCKRKHVKQAQEFFDKVNVE-VMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERG 249
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
C ++ Y L+ L K V +A ++F EM G+ P + + F+ C H+A
Sbjct: 250 CAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAF 309
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+ + R+ ++ Y ++++L K L EM E G D Y + A
Sbjct: 310 QVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFH 369
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
C+ ++ A+ ++ ++ P R Y+ + LL + + +++
Sbjct: 370 CDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVW 417
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 101/243 (41%), Gaps = 2/243 (0%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE-KGCGPDTNAYNAVISNYISVGDFDE 355
GF ++ L++ LG + + + M+E + C + + Y +
Sbjct: 109 GFEHSKESYHILVDILGSSKQFPLIWDFLSDMRETRCCEICPEIFWLIFRAYCRANLPGD 168
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
++ + M + + + +L+ L K + V A E F++ ++ ++P+ T + +
Sbjct: 169 AIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDK-VNVEVMPNAKTYSILMR 227
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
G A ++++ R+ GC + + AY LL L G L+ EM +G
Sbjct: 228 GWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAP 287
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
D Y I C + + +A V++ R P+ Y+ + KL S K++ AY L
Sbjct: 288 DACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLL 347
Query: 536 RKI 538
++
Sbjct: 348 DEM 350
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 64/172 (37%), Gaps = 1/172 (0%)
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
CE + + + ++ DA+ F +M D G+ G + L LC A
Sbjct: 146 CEICPEIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQ 205
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+ K V + Y +L+R G L+ EM+E G D Y ++ L
Sbjct: 206 EFFDKV-NVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEAL 264
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
C G ++ A + E G P YS N + SA+ + +++
Sbjct: 265 CKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMR 316
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 210/422 (49%), Gaps = 6/422 (1%)
Query: 123 VNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFM 182
V+ L + + K+ N G L+ + FF WA K +SY+ ++++LG+ K F+ +
Sbjct: 3 VSPSLVFEALKKLSNAGALA----LSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNVI 58
Query: 183 CNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWC 242
N+++DM ++G+ + ET +++ + RA +V +A+ ++E FGLK ++ +N +L
Sbjct: 59 WNLVTDMKQKGL-LNKETFALISRRYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLDT 117
Query: 243 LCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
LC+ V A +F+ M K + ++ +Y I++ GW + + + V E+ EGF PD
Sbjct: 118 LCKSRQVERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPD 177
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+T+ LI ++ R DDAIE+F M+ K C P + Y +I+ + E +++++
Sbjct: 178 VVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEALEFFE 237
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
+ P TY ++ S ++ D +EM G+ PS T L L G
Sbjct: 238 LSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAG 297
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
A +++K GC+ S++ Y++++R + M + +W +M+ G ++
Sbjct: 298 KTKIAYSVFQKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMFS 357
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
+I LC+ +L+ A + +E L G P ++S L LL K ++ RK+
Sbjct: 358 TLINSLCHESKLDEACMYFQEMLDVGIRPPAQLFSNLKQNLLDEGKKDTVVVFERKLDKL 417
Query: 542 RQ 543
R+
Sbjct: 418 RK 419
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 78/209 (37%), Gaps = 34/209 (16%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+ +YN +V A + D + + +M K GV P T I++ IRAG+ A +
Sbjct: 247 EAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVF 306
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLG 281
++ G CQ +V TY I++ +
Sbjct: 307 QKMSCEG---------------CQP-------------------SVSTYEIIVRMFCNED 332
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+V +V ++ A+G P FS LI L ++D+A F M + G P ++
Sbjct: 333 RVDMAIKVWDQMKAKGILPVMHMFSTLINSLCHESKLDEACMYFQEMLDVGIRPPAQLFS 392
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEP 370
+ N + G D + + + + P
Sbjct: 393 NLKQNLLDEGKKDTVVVFERKLDKLRKAP 421
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 224/458 (48%), Gaps = 6/458 (1%)
Query: 88 SSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMV 147
S AVD F P +RL + + K G +E L + ++ ++ DV +V+ R + +G
Sbjct: 28 SDVAVDSFD-PAKRLCKLIISCQKASG-LELELDHSDLRVTPDVAERVLERLDNAGMLAY 85
Query: 148 LFFNWAIKHPN--VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
FF WA K ++SY+ +V +L + + + M +V++ M +EGV ++ET I+M
Sbjct: 86 RFFEWARKQKRGGCNHTIRSYHTVVASLAKIRQYQLMWDVVAIMRREGV-VNVETFGIIM 144
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF 265
+ RA + +A+ +E +G+ + + N +L LC+ +V A +F+ M G+
Sbjct: 145 RKYARAQKFDEAVYTFNIMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNGRFNP 204
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+ TY+I++ GW K + +M V E++ G PD +T+ +++ L + GR+++A+ V
Sbjct: 205 DAKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVLVV 264
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
M +GC P T Y+ ++ Y ++ + + M P++ Y L++ K
Sbjct: 265 QDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKV 324
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+K +A V ++M GI P++ T L L S G A ++++ K C+ Y
Sbjct: 325 KKFENAFRVMDDMEGHGIAPNSRTWNIILNKLISLGKDDEAYRVFRRMIK-RCQPDSDTY 383
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
++++ M L +W M+ + + +I GLC+ G++ A +++E+ +
Sbjct: 384 TMMIKMFCENDNVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIE 443
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
KG P + KL LL + + L K+KI Q
Sbjct: 444 KGIRPPGSTFGKLRQLLLKEGRKDVLEFLVDKMKILIQ 481
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 195/411 (47%), Gaps = 2/411 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E +L + ++S ++V +V+ R G + FF WA + P +SY+++V LG
Sbjct: 65 LETSLNAFSSEISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSEESYHILVNILGT 124
Query: 176 RKFFDFMCNVLSDMAK-EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
+ F + + L +M + + E + +V S+ RA AI+ R+ +FGL+ +
Sbjct: 125 SRQFAILWDFLIEMRESHDFEINQEIIWLVFRSYSRANLPSDAIRAFDRMAEFGLRPSVD 184
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
L+ +L+ LC+ HV A F+ +K K TY+I++ GW +G+ VE +V E+
Sbjct: 185 DLDKLLYVLCKCKHVKCAQQFFDRVKHKFEAKAKTYSILVRGWGDIGEAVEARKVFDEMR 244
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
G + D L ++ L+E L + G +D+A ++F + G PD +Y I Y +
Sbjct: 245 GRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNIH 304
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
M Y+ PN+ TY +I L K+ KV DA ++ EM++RG+ P + + L
Sbjct: 305 SVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTIL 364
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
C + + A + K C +Y +LL+ L G+ ++W M E G+
Sbjct: 365 AYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGERGFY 424
Query: 475 SDGEIYEYVIAGLC-NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
Y +I GLC G+LE A E + +G P L N+L+
Sbjct: 425 PSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYASTIEMLRNRLIG 475
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 74/184 (40%), Gaps = 1/184 (0%)
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ ++ + M+ + P++D +L+ L K + V A + F+ + + T + +
Sbjct: 166 DAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHK-FEAKAKTYSILV 224
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
G A ++ + R GC L + AY LL L G ++ E+ G
Sbjct: 225 RGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVE 284
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
D Y I C + + V++ R P+ Y+ + KL + K+E AY L
Sbjct: 285 PDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQL 344
Query: 535 FRKI 538
++
Sbjct: 345 LHEM 348
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 1/151 (0%)
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+DA+ F+ M + G+ PS + L LC A + + K + Y +L
Sbjct: 165 SDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRV-KHKFEAKAKTYSIL 223
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+R G+ ++ EM+ G D Y ++ LC G ++ A + E G
Sbjct: 224 VRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGV 283
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P Y+ +N + S +++ ++K
Sbjct: 284 EPDACSYAIFIRAYCEANNIHSVFSVLDRMK 314
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 212/430 (49%), Gaps = 4/430 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWA--IKHPNVAKDVKSYNVIVKAL 173
+E L + V ++ +V +V+ R + +G FF WA K A V+SY+ +V +L
Sbjct: 55 VEHELDHSGVRVTPEVAERVLERLDNAGMLAYRFFEWARRQKRGGCAHTVRSYHTVVASL 114
Query: 174 GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA 233
+ + + M +V++ M KEGV ++ET SI+M + RA + +A+ +E +G+ +
Sbjct: 115 AKIRQYQLMWDVVAVMRKEGV-ANVETFSIIMRKYARAQKFDEAVYTFNIMERYGVAHNL 173
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
+ N +L LC+ +V A +F+ M + + TY+I++ GW + + +M V ++
Sbjct: 174 AAFNSLLGALCKSKNVRKAQEIFDKMNNRFSPDAKTYSILLEGWGRAPNLPKMREVYSDM 233
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+A G PD +T+ +++ L + GR+++A+ V M +GC P T Y+ ++ Y
Sbjct: 234 LAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSVLVHTYGVDMRI 293
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
++ + + M P++ Y L++ K +K +A V ++M GI P++ T
Sbjct: 294 EDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGISPNSRTWNII 353
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
L L S G A +++ K CK Y ++++ K M L +W M+ +
Sbjct: 354 LNTLISLGKDDEAYRVFRNMIK-RCKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQF 412
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
+ +I GLC+ G++ A +++E+ + KG P + KL LL + +
Sbjct: 413 LPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLDF 472
Query: 534 LFRKIKIARQ 543
L K+K+ Q
Sbjct: 473 LVEKMKMLIQ 482
>gi|255548471|ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 205/407 (50%), Gaps = 1/407 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L ++LS D+V V+ R + + FF WA + D ++YN ++ L +
Sbjct: 82 MEAVLDECGINLSHDLVIDVLERFCHARKPAFRFFCWAGEKQGFEHDSRTYNSMMSILAK 141
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ F+ + ++L +M +GV ++T SI M +F A + KA+ M ++ + K E+
Sbjct: 142 TRQFETVVSMLEEMGGKGV-LTMDTFSIAMRAFAAAKERKKAVAMFELMKKYNYKVGVET 200
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
+N +L L + A +LF ++KG+ N+ TY ++++GW K+ ++E V E++
Sbjct: 201 INHLLDSLGRAKLGKEAQALFENLKGRFTPNLRTYTVLLNGWCKVKNLMEAGSVWNEMID 260
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+GF PD + + ++EGL R+ + DAI++F MK KG PD +Y +I +E
Sbjct: 261 KGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEE 320
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
++Y++ M C+P+ YT LI+G +++ ++ +EM + G P T + ++
Sbjct: 321 AVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLLKEMKEEGCPPDGLTYNALIK 380
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
+ P A +YKK + G + ++ Y ++++ M +W EM G+
Sbjct: 381 LMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIMKSYFQTRNYEMGRAVWDEMSRKGFCP 440
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
D Y +I GL + G+ A +EE L KG +L Y+K L
Sbjct: 441 DDNSYTVLIGGLISQGRSGEACKYLEEMLEKGMKAPQLDYNKFGADL 487
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 143/320 (44%), Gaps = 2/320 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K N V++ N ++ +LGR K L + K P+L T +++++ + +
Sbjct: 189 MKKYNYKVGVETINHLLDSLGRAKLGK-EAQALFENLKGRFTPNLRTYTVLLNGWCKVKN 247
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
+ +A + + D G K D + N++L L + A LF MK K +V +Y I
Sbjct: 248 LMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVRSYTI 307
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I + ++ E +E++ G PD+ ++ LI G G R+D ++ MKE+G
Sbjct: 308 LIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLLKEMKEEG 367
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
C PD YNA+I + D+ + YK M+ EP + TY ++ ++R
Sbjct: 368 CPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIMKSYFQTRNYEMGR 427
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
V++EM +G P + T + L S G A ++ + G K Y L
Sbjct: 428 AVWDEMSRKGFCPDDNSYTVLIGGLISQGRSGEACKYLEEMLEKGMKAPQLDYNKFGADL 487
Query: 453 SGFGKCGMLLDLWHEMQESG 472
S G +L +L ++ SG
Sbjct: 488 SRGGNPDILEELAQRLKFSG 507
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 226/462 (48%), Gaps = 6/462 (1%)
Query: 86 IDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEA 145
+ S A E P +RL + + + G +E L + ++ ++ DV +V+ R + +G
Sbjct: 23 VGGSDAAVEAFDPAKRLCKLIISCRQASG-LEIELDHSDLRVTPDVAERVLERLDNAGML 81
Query: 146 MVLFFNWAIKHPN---VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
FF WA K A V+S++ +V +L + + + M +V++ M ++GV ++ET
Sbjct: 82 AYRFFEWARKQRRGGGCAHTVRSFHTVVASLAKIRQYQLMWDVVAIMRRQGV-VNVETFG 140
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK 262
I+M + RA +V +A+ +E +G+ + + N +L LC+ +V A +F M G+
Sbjct: 141 IIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNGR 200
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ TY+I++ GW + + +M +V +++ G PD +T+ +++ L + GR+++A+
Sbjct: 201 FSPDAKTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVEEAV 260
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
V M +GC P T Y+ ++ Y ++ + + M P++ Y L++
Sbjct: 261 FVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAF 320
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K +K +A V ++M GI P++ T L L S G A ++++ K C+
Sbjct: 321 CKVKKFDNAFRVMDDMEGHGITPNSRTWNIILNKLISLGKDDEAYRVFRRMIK-RCQPDS 379
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y ++++ + M L +W M+ + + +I GLC+ G++ A +++E+
Sbjct: 380 DTYTMMIKMFCENDRLEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLED 439
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
+ KG P + KL LL + + L K+KI Q
Sbjct: 440 MIEKGIRPPGSTFGKLRQLLLKEGRKDVLEFLVDKMKILIQE 481
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 210/430 (48%), Gaps = 4/430 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPN--VAKDVKSYNVIVKAL 173
+E L + V ++ ++ V+ + +G FF WA K A V+SY+ +V +L
Sbjct: 57 LEHELDHSGVRVTPEIAESVLKHLDNAGMLAYRFFEWARKQKRGVCAHTVRSYHTVVTSL 116
Query: 174 GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA 233
+ + + M +V++ M KEGV ++ET I+M + RA ++ +A+ +E +G+ +
Sbjct: 117 AKIRQYQLMWDVVAIMRKEGV-ANVETFGIIMRKYARAQKLDEAVYTFNVMEKYGVAHNL 175
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
+ N +L LC+ +V A +F+ M + + TY+I++ GW + + +M V ++
Sbjct: 176 AAFNSLLSALCKSKNVRKAQEIFDKMNNRFSPDAKTYSILLEGWGRAPSLPKMREVYSDM 235
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+A G PD +T+ +++ L + GR+++A+ V M +GC P T Y+ ++ Y
Sbjct: 236 LAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSILVHTYGVDMRI 295
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
++ + + M P++ Y LI+ K +K +A V ++M GI P++ T
Sbjct: 296 EDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISPNSRTWNII 355
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
L L S G A +++ K CK Y ++++ K M L +W M+ +
Sbjct: 356 LNTLISLGKDDEAYRVFRSMIK-RCKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQF 414
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
+ +I GLC+ G++ A +++E+ + KG P + KL LL + +
Sbjct: 415 LPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLDF 474
Query: 534 LFRKIKIARQ 543
L K+KI Q
Sbjct: 475 LVEKMKILAQ 484
>gi|297821162|ref|XP_002878464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324302|gb|EFH54723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 628
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 211/426 (49%), Gaps = 1/426 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L + V+LS D++ KV+ R + + FF WA + A D ++YN ++ L +
Sbjct: 157 MEAVLDEMKVELSHDLIVKVLERFRHARKPAFRFFCWAAEKQGFAHDSRTYNSMMSILAK 216
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ F+ M +VL +M +G+ +ET +I M +F A + KA+ + ++ + K E+
Sbjct: 217 TRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVET 275
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
+N +L L + A LF+ +K + N+MTY ++++GW ++ ++E R+ +++
Sbjct: 276 INCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 335
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+G PD + + ++EGL R+ + DAI++F MK KG P+ +Y +I ++ +
Sbjct: 336 QGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 395
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
++Y+ M +P+ YT LI+G +K+ E+ +EM ++G P T + ++
Sbjct: 396 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 455
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
+ + P A +Y K + + S+ + ++++ M +W EM + G
Sbjct: 456 LMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGSAVWDEMIKKGICP 515
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
D Y +I GL G+ A +EE L KG + Y+K + + E L
Sbjct: 516 DDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHKGGQPEIFEELA 575
Query: 536 RKIKIA 541
++ K +
Sbjct: 576 QRAKFS 581
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 141/319 (44%), Gaps = 2/319 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V++ N ++ +LGR K VL D KE P++ T +++++ + R + +A ++
Sbjct: 273 VETINCLLDSLGRAKLGK-EAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 331
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+ D GLK D + NV+L L + A LF+ MK K NV +Y I+I + K
Sbjct: 332 DMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 391
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ ++V G PD+ ++ LI G G ++D E+ M+EKG PD YN
Sbjct: 392 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 451
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A+I + + + Y M EP++ T+ ++ +R V++EM+ +
Sbjct: 452 ALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGSAVWDEMIKK 511
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
GI P + T + L G A ++ G K L Y G+ +
Sbjct: 512 GICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHKGGQPEIF 571
Query: 462 LDLWHEMQESGYPSDGEIY 480
+L + SG + EI+
Sbjct: 572 EELAQRAKFSGKFAAAEIF 590
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 210/413 (50%), Gaps = 4/413 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E AL + +S ++ V+ R +G FF WA K N V++Y+ ++++L +
Sbjct: 9 LETALDQTGIRISPEIAEPVLRRFENAGMLAYRFFEWASKQRNYVHSVRAYHSMIESLAK 68
Query: 176 RKFFDFMCNVLSDMA-KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
+ + + ++++ M KE +N +E I+M + RA +V +A+ +E + +K +
Sbjct: 69 IRQYQMVWDLVNAMRNKEILN--VEAFCIIMRKYARAQKVEEAVYTFNVMEKYNMKPNVA 126
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
+ N +L LC+ +V A +F++MK + + + TY+I+I GW + + + + +E++
Sbjct: 127 AFNGLLSALCKSKNVRKAQEIFDNMKDQFVPDSKTYSILIEGWGRAPNLPKAREIYREMI 186
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
G PD +T+S +++ L +AGR+D+A+E+ M C P + Y+ ++ Y +
Sbjct: 187 DSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIE 246
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ + + M ++ Y LIS K+ K+ + V ++M +G+ P++ T +
Sbjct: 247 DAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIII 306
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
L G A ++++ KV C+ + +Y ++++ G + M L +W M++ +
Sbjct: 307 NSLIGRGETDEAFKIFRRMIKV-CEPDVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFV 365
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
+ +I GLC IG A +++EE + KG PS + +L + L+ +
Sbjct: 366 PSMHTFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGATFGRLRHLLIKEGR 418
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 105/245 (42%), Gaps = 2/245 (0%)
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
+ +IE L + + ++ + M+ K + A+ ++ Y +E + + M
Sbjct: 58 AYHSMIESLAKIRQYQMVWDLVNAMRNKEI-LNVEAFCIIMRKYARAQKVEEAVYTFNVM 116
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
YN +PN+ + L+S L KS+ V A E+F+ M D+ VP + T + +E
Sbjct: 117 EKYNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNMKDQ-FVPDSKTYSILIEGWGRAPNL 175
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A +Y++ GC Y +++ L G+ +++ EM + IY +
Sbjct: 176 PKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVL 235
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
+ ++E+AV E R G Y+ L + +NK+++ Y + + + +
Sbjct: 236 VHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGV 295
Query: 544 NDYAR 548
N +R
Sbjct: 296 NPNSR 300
>gi|15228767|ref|NP_191806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181319|sp|Q9LZP3.1|PP293_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62470, mitochondrial; Flags: Precursor
gi|7340718|emb|CAB82961.1| putative protein [Arabidopsis thaliana]
gi|34365579|gb|AAQ65101.1| At3g62470 [Arabidopsis thaliana]
gi|332646835|gb|AEE80356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 204/404 (50%), Gaps = 1/404 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L + +DLS D++ +V+ R + + FF WA + A D ++YN ++ L +
Sbjct: 148 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAK 207
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ F+ M +VL +M +G+ +ET +I M +F A + KA+ + ++ + K E+
Sbjct: 208 TRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVET 266
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
+N +L L + A LF+ +K + N+MTY ++++GW ++ ++E R+ +++
Sbjct: 267 INCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 326
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+G PD + + ++EGL R+ + DAI++F MK KG P+ +Y +I ++ +
Sbjct: 327 QGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 386
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
++Y+ M +P+ YT LI+G +K+ E+ +EM ++G P T + ++
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
+ + P A +Y K + + S+ + ++++ M +W EM + G
Sbjct: 447 LMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICP 506
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
D Y +I GL G+ A +EE L KG + Y+K +
Sbjct: 507 DDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFA 550
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 141/319 (44%), Gaps = 2/319 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V++ N ++ +LGR K VL D KE P++ T +++++ + R + +A ++
Sbjct: 264 VETINCLLDSLGRAKLGK-EAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 322
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+ D GLK D + NV+L L + A LF+ MK K NV +Y I+I + K
Sbjct: 323 DMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 382
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ ++V G PD+ ++ LI G G ++D E+ M+EKG PD YN
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A+I + + + Y M EP++ T+ ++ +R V+EEM+ +
Sbjct: 443 ALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKK 502
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
GI P + T + L G A ++ G K L Y G+ +
Sbjct: 503 GICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIF 562
Query: 462 LDLWHEMQESGYPSDGEIY 480
+L + SG + EI+
Sbjct: 563 EELAQRAKFSGKFAAAEIF 581
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 120/278 (43%), Gaps = 37/278 (13%)
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC------GPDTNAYNAVISNYIS 349
+GF+ DS T++ ++ L + + + + V + M KG A+ A +
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKA 248
Query: 350 VGDFDECMKYYK---GMSSYNC-------------------------EPNMDTYTRLISG 381
VG F E MK YK G+ + NC PNM TYT L++G
Sbjct: 249 VGIF-ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNG 307
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
+ R + +A ++ +M+D+G+ P LE L A+ ++ + G +
Sbjct: 308 WCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPN 367
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ +Y +++R ++ + +M +SG D +Y +I G +L+ +++
Sbjct: 368 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 427
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKL-ESAYNLFRKI 538
E KG P Y+ L KL+A+ K+ E A ++ K+
Sbjct: 428 EMQEKGHPPDGKTYNALI-KLMANQKMPEHATRIYNKM 464
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 187/378 (49%), Gaps = 3/378 (0%)
Query: 165 SYNVIVKAL-GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
++N ++ L + K D + + +M K G PD+ T S +++ + G A+Q+L +
Sbjct: 12 TFNTLLSGLCSKAKIMDAV-KLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKK 70
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQ 282
+E+ G K + + N ++ LC+ V A F+ M K + +V TY+ ++ G+ LG+
Sbjct: 71 MEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGR 130
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V E + K++V P+ +TF+ LI+GL + I +A VF+TM EKG PD YNA
Sbjct: 131 VNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNA 190
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
++ Y S DE K + M C PN+ +Y LI+G KS ++ +A + EM +
Sbjct: 191 LVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKS 250
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
+ P T ++ + C G P A + K+ G +L Y ++L L G
Sbjct: 251 LTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAF 310
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+L MQES + IY +I G+C G+LE A + KG P+ + Y+ + + L
Sbjct: 311 ELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGL 370
Query: 523 LASNKLESAYNLFRKIKI 540
L A LFR++ +
Sbjct: 371 LKGGLSNEACELFREMAV 388
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 188/377 (49%), Gaps = 6/377 (1%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV +YN I+ +L + + + S+M KEG+ PD+ T S ++ F G+V +
Sbjct: 78 PNVV----AYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNE 133
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVIS 275
A + ++ + + + + +++ LC++ + A +F +M K L +V TYN ++
Sbjct: 134 ATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVD 193
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G+ Q+ E +++ + +G +P+ +++ LI G ++GRID+A + M K P
Sbjct: 194 GYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTP 253
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D Y+ ++ + VG E + K M SY PN+ TY+ ++ GL K + +A E+
Sbjct: 254 DIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELL 313
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
+ M + I P+ T +E +C++G AA ++ G + ++ Y +++ L
Sbjct: 314 KAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKG 373
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
G +L+ EM +G + Y +I G G NAV ++EE + KGF +
Sbjct: 374 GLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTF 433
Query: 516 SKLSNKLLASNKLESAY 532
LS+ L +S+++ S +
Sbjct: 434 RMLSD-LESSDEIISQF 449
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 175/378 (46%), Gaps = 1/378 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y+ I+ L + +L M ++G P++ + ++DS + V +A+
Sbjct: 44 DVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFF 103
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ G+ D + + +L C V A+SLF M + V+ N +T+ I+I G K
Sbjct: 104 SEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKK 163
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ E V + + +G PD T++ L++G ++D+A ++F+ M KGC P+ +Y
Sbjct: 164 RMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSY 223
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I+ + G DE MS + P++ TY+ L+ G + + +A E+ +EM
Sbjct: 224 NILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCS 283
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G++P+ T + L+ LC +G A + K ++ + ++ Y +L+ + FGK
Sbjct: 284 YGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEA 343
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+L+ + G Y +I+GL G A + E G P+ Y+ +
Sbjct: 344 ARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQ 403
Query: 521 KLLASNKLESAYNLFRKI 538
L + +A L ++
Sbjct: 404 GFLRNGDTPNAVRLIEEM 421
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 139/309 (44%), Gaps = 35/309 (11%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
++T+N ++SG ++++ ++ E+V G PD +T+S +I GL + G A+++
Sbjct: 9 TLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLL 68
Query: 326 DTMKEKGCGPDTNAYNAVISN-----------------------------------YISV 350
M+EKGC P+ AYN +I + + ++
Sbjct: 69 KKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNL 128
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
G +E +K M N PN T+T LI GL K R +++A VFE M ++G+ P T
Sbjct: 129 GRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTY 188
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+ ++ CS A ++ + GC ++ +Y +L+ G+ L EM
Sbjct: 189 NALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSH 248
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
D Y ++ G C +G+ + A +++E G P+ + YS + + L L+
Sbjct: 249 KSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDE 308
Query: 531 AYNLFRKIK 539
A+ L + ++
Sbjct: 309 AFELLKAMQ 317
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 116/245 (47%), Gaps = 6/245 (2%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
G P +TF+ L+ GL +I DA+++FD M + G PD Y+ +I+ +G+
Sbjct: 5 GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
++ K M C+PN+ Y +I L K R V +A++ F EM+ GI P T +S L
Sbjct: 65 LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW---HEMQESGY 473
C+ G + A ++K+ + + + +L + G K M+ + W M E G
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTIL---IDGLCKKRMISEAWLVFETMTEKGL 181
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
D Y ++ G C+ Q++ A + RKG P+ Y+ L N S +++ A
Sbjct: 182 EPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKG 241
Query: 534 LFRKI 538
L ++
Sbjct: 242 LLAEM 246
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 62/141 (43%)
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M G+ P+ T + L LCS A+ ++ + K+G + + Y ++ L G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
M L L +M+E G + Y +I LC + A+ E +++G P YS
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ + ++ A +LF+++
Sbjct: 121 ILHGFCNLGRVNEATSLFKQM 141
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 182/371 (49%), Gaps = 8/371 (2%)
Query: 171 KALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLK 230
K + K FD +M K G PD+ T S +++ + G AIQ+L ++E+ G K
Sbjct: 62 KIIDAVKLFD-------EMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCK 114
Query: 231 FDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERV 289
+ + ++ LC+ + A + M + + NV+TY+ ++ G+ LG+ E +
Sbjct: 115 PNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSL 174
Query: 290 LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYIS 349
K++V PD++TF+ L++GL + G I +A VF+TM EKG P+ N YNA++ Y S
Sbjct: 175 FKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCS 234
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
DE K + M C P++ +Y LI G KS ++ +A + EM + + P T T
Sbjct: 235 QSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVT 294
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
++ ++ C G P A + ++ R G L Y ++L L G +L MQ
Sbjct: 295 YSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQ 354
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
ES + IY +I G+CN G+LE A + KG P + Y+ + + LL
Sbjct: 355 ESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSN 414
Query: 530 SAYNLFRKIKI 540
A LFR + +
Sbjct: 415 EACELFRDMAV 425
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 179/378 (47%), Gaps = 1/378 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y+ I+ L + +L M ++G P++ S ++DS + + +A++ L
Sbjct: 81 DVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFL 140
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ + G+ + + + +L C A+SLF M + V+ + +T+NI++ G SK
Sbjct: 141 SEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKE 200
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G ++E + V + ++ +G P+ T++ L++G ++D+A ++F+ M KGC P +Y
Sbjct: 201 GMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSY 260
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I + G DE MS P+ TY+ L+ G + + DA ++ EEM
Sbjct: 261 NILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRS 320
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G++P T + L+ LC G A + K ++ + ++ Y +L++ + FGK
Sbjct: 321 YGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEA 380
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+L+ + G D Y +I+GL G A + + G P+ Y+ +
Sbjct: 381 ARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQ 440
Query: 521 KLLASNKLESAYNLFRKI 538
L + +A L ++
Sbjct: 441 GFLRNGDTSNAGRLIEEM 458
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 174/365 (47%), Gaps = 5/365 (1%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV Y+ I+ +L + K LS+M G++P++ T S ++ F G+ +
Sbjct: 115 PNVV----VYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNE 170
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVIS 275
A + ++ + + D + N+++ L + + A +F +M K V NV TYN ++
Sbjct: 171 ATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMD 230
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G+ Q+ E +++ +V +G +P +++ LI+G ++GRID+A + M K P
Sbjct: 231 GYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTP 290
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
DT Y+ ++ + G + K + M SY P++ TY+ ++ GL K + +A E+
Sbjct: 291 DTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELL 350
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
+ M + I P+ T ++ +C++G AA ++ G + + Y +++ L
Sbjct: 351 KAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKG 410
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
G +L+ +M G + Y +I G G NA ++EE + +GF +
Sbjct: 411 GLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTF 470
Query: 516 SKLSN 520
LS+
Sbjct: 471 QMLSD 475
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 156/349 (44%), Gaps = 38/349 (10%)
Query: 229 LKFDAESLNVVLWCLCQRLHVG---AASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE 285
++ D +L +++ C C H A S L N K + N +T++ +++G S ++++
Sbjct: 6 IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
++ E+V G+ PD +T+S +I GL + G AI++ M+EKGC P+ Y+ +I
Sbjct: 66 AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID 125
Query: 346 N-----------------------------------YISVGDFDECMKYYKGMSSYNCEP 370
+ + ++G +E +K M N P
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMP 185
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
+ T+ L+ GL K + +A VFE M+++G+ P+ T + ++ CS A ++
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF 245
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
+ GC S+ +Y +L++ G+ L EM D Y ++ G C
Sbjct: 246 NIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQD 305
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G+ ++A ++EE G P + YS + + L L+ A+ L + ++
Sbjct: 306 GRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQ 354
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 87 DSSRAVDEF----LLPEERLRGVFLQKLKGKGVIEDAL----------WNVNVDLSLDVV 132
D+ + ++E LLP+ + L L +G +++A N+ + ++
Sbjct: 310 DAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILI 369
Query: 133 GKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKE 192
+ N G L A LF N +K + DV +Y V++ L + + C + DMA
Sbjct: 370 QGMCNFGKLEA-ARELFSNLFVK--GIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVH 426
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL--EDFGLKFDAES 235
G P+ T ++++ F+R G A GRL E G F A+S
Sbjct: 427 GCLPNSCTYNVIIQGFLRNGDTSNA----GRLIEEMVGRGFSADS 467
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 216/467 (46%), Gaps = 6/467 (1%)
Query: 84 KRIDSSRAVDEFLLPE------ERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVN 137
++ D VD ++L E +++ + + + AL V +S +V +V+
Sbjct: 68 QKHDHRSKVDGYVLKETIDSDIDKISELLKFRHSSADAVVQALGGCGVSVSESLVEQVLK 127
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
R + FF WA + SYN +V LG+ K FD M ++ +M + G
Sbjct: 128 RFSNDWIPAFGFFKWAKAQTGYRHSMNSYNSMVDILGKLKKFDLMWELVEEMDRLGGYVS 187
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
L T++ VM RA + AI+ +E FG+K D ++N ++ L + V A+ +F
Sbjct: 188 LATMTKVMRRLARASRWKDAIEAFRGMERFGVKKDTLAMNTLMDALVKENSVEHANDVFV 247
Query: 258 SMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
K +L N T+N++I GW K ++ + + E+ GF PD ++++ ++E R
Sbjct: 248 EFKDSILLNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKD 307
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
V + M+EKGC P+ Y V+ + + ++ Y+ M +C P+ Y+
Sbjct: 308 FRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSS 367
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
LI L K+ ++ DA +VFE+M +G +P T + + C + A+ + K +
Sbjct: 368 LIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESS 427
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
CK L Y LL+ + +L L + M ++ + Y ++ GLC G+LE+A
Sbjct: 428 CKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHAC 487
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
L EE + KG P + L +L + +E+ + + + ARQ
Sbjct: 488 LFFEEMVSKGLVPKDCTHKLLLKELEKKSMVEAKERVEKLMSQARQQ 534
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 210/425 (49%), Gaps = 7/425 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E AL V+L ++ +V+NR +G FF WA K P ++ Y +VK L +
Sbjct: 100 LELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSK 159
Query: 176 RKFFDFMCNVLSDMAKEGVNPDL---ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
+ F + ++ +M KE NP L E +++ F A V KAI++L + FG + D
Sbjct: 160 MRQFGAVWGLIEEMRKE--NPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPD 217
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
+L LC+ V A+ LF M+ + N+ + ++ GW ++G+++E + VL +
Sbjct: 218 EYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQ 277
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+ GF PD + ++ L+ G AG++ DA ++ M+ +G P+ N Y +I V
Sbjct: 278 MNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDR 337
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
+E MK + M Y CE ++ TYT L+SG K K+ V ++M+ +G++PS T
Sbjct: 338 MEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMH 397
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
+ + + +K R++ + Y +++R G+ + LW+EM+E+G
Sbjct: 398 IMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG 457
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG-FCPSRLVYSK-LSNKLLASNKLES 530
+ + +I GL + G L A +E + +G F S+ K L N +L KLE
Sbjct: 458 LSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEM 517
Query: 531 AYNLF 535
A +++
Sbjct: 518 AKDVW 522
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 152/379 (40%), Gaps = 50/379 (13%)
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWC------------LCQRLHVGAASSLF 256
+R G + + + G + G +F + +C L + GA L
Sbjct: 111 LRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLI 170
Query: 257 NSMKGK--VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
M+ + L + +++ ++ V + VL E+ GF PD F L++ L +
Sbjct: 171 EEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCK 230
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G + DA ++F+ M+ + + + +++ + VG E M+ EP++
Sbjct: 231 HGSVKDAAKLFEDMRMRF-PVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVD 289
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
YT L+SG + K+ADA ++ +M RG P+ T ++ LC AM ++ +
Sbjct: 290 YTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEME 349
Query: 435 KVGCKLSLTAYKLLLRRLSGFG---KCGMLLD------------------LWHEMQES-- 471
+ C+ + Y L+ +G KC ++LD + HE +ES
Sbjct: 350 RYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFE 409
Query: 472 ------------GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
Y D IY VI C +G+++ AV + E G P + +
Sbjct: 410 ECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMI 469
Query: 520 NKLLASNKLESAYNLFRKI 538
N L + L A + F+++
Sbjct: 470 NGLASQGCLLEASDHFKEM 488
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/341 (18%), Positives = 129/341 (37%), Gaps = 75/341 (21%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
VL M + G PD+ + ++ + AG++ A +L + G + +A V++ LC
Sbjct: 274 VLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALC 333
Query: 245 QRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ + A +F M + + +V+TY ++SG+ K G++ + VL +++ +G P L
Sbjct: 334 KVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSEL 393
Query: 304 TF-----------------------------------SFLIEGLGRAGRIDDAIEVFDTM 328
T+ + +I + G + +A+ +++ M
Sbjct: 394 TYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEM 453
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM--------SSYN------------- 367
+E G P + + +I+ S G E ++K M S Y
Sbjct: 454 EENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDK 513
Query: 368 -----------------CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
CE N+ ++T I L +A EM++ +P T
Sbjct: 514 KLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTF 573
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
++ L A + +K R + + ++ +K+ RR
Sbjct: 574 AKLMKGLKKLYNREFAGEITEKVRNMAAEREMS-FKMYKRR 613
>gi|255582957|ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528067|gb|EEF30143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 190/395 (48%), Gaps = 5/395 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
IE AL N ++ D++ KV+ R + ++FFNW K V +YN I+ LG+
Sbjct: 67 IELALTQCNPTVTEDLILKVLKRHRSDWKPALIFFNWVSKGGKVLMGSGAYNEILDILGK 126
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ FD + VL M+K + ET ++++ + A +V +AI++ D GL+ D S
Sbjct: 127 MRRFDELSQVLDIMSKREGLVNEETYRVLVNRYAAAHKVEEAIEIFNTRRDIGLEIDLVS 186
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
+L LC+ HV A SL S ++ T NIV++GW LG V E +R K+I+
Sbjct: 187 FQNLLMFLCRYKHVQIAESLLYSKGKDFGMDIKTMNIVLNGWCVLGNVHEAKRFWKDIIG 246
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
PD T+ I+ L + G++ A++++ M EK C PD N +I E
Sbjct: 247 SKCKPDLFTYGTFIKALTKKGKLGTALKIYRAMWEKQCKPDVVICNCIIDALCFKNRVPE 306
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR--GIVPSTGTITSF 413
++ ++ MS C PN TY LI + R++ E+ +EMLD+ +P T
Sbjct: 307 ALEVFREMSQQGCLPNGATYNSLIKHFSRIRRMEKVYELLDEMLDKKGSCMPDHITFNYL 366
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
L+ L P ++ ++ + GC +S Y L+LR + + + D W+EM++ G
Sbjct: 367 LKAL---KKPEELPLVLERMERNGCMISTDTYNLILRLYADWDCEERVGDTWNEMEKLGL 423
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
D Y +I L G++ +A+ E KG
Sbjct: 424 GPDRRSYTIMIHWLYEKGRINDALHYFGEMTSKGM 458
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 101/234 (43%), Gaps = 5/234 (2%)
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
++ +++ LG+ R D+ +V D M ++ + Y +++ Y + +E ++ +
Sbjct: 116 AYNEILDILGKMRRFDELSQVLDIMSKREGLVNEETYRVLVNRYAAAHKVEEAIEIFNTR 175
Query: 364 SSYNCEPNMDTYTRLISGLLKSR--KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
E ++ ++ L+ L + + ++A++L ++ + D G+ T+ L C G
Sbjct: 176 RDIGLEIDLVSFQNLLMFLCRYKHVQIAESL-LYSKGKDFGM--DIKTMNIVLNGWCVLG 232
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
H A +K CK L Y ++ L+ GK G L ++ M E D I
Sbjct: 233 NVHEAKRFWKDIIGSKCKPDLFTYGTFIKALTKKGKLGTALKIYRAMWEKQCKPDVVICN 292
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+I LC ++ A+ V E ++G P+ Y+ L ++E Y L
Sbjct: 293 CIIDALCFKNRVPEALEVFREMSQQGCLPNGATYNSLIKHFSRIRRMEKVYELL 346
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 3/203 (1%)
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+ AYN ++ + FDE + MS N +TY L++ + KV +A+E+F
Sbjct: 114 SGAYNEILDILGKMRRFDELSQVLDIMSKREGLVNEETYRVLVNRYAAAHKVEEAIEIFN 173
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPH-AAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
D G+ + + L LC Y A ++Y K + G + + ++L
Sbjct: 174 TRRDIGLEIDLVSFQNLLMFLCRYKHVQIAESLLYSKGKDFG--MDIKTMNIVLNGWCVL 231
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
G W ++ S D Y I L G+L A+ + K P ++
Sbjct: 232 GNVHEAKRFWKDIIGSKCKPDLFTYGTFIKALTKKGKLGTALKIYRAMWEKQCKPDVVIC 291
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
+ + + L N++ A +FR++
Sbjct: 292 NCIIDALCFKNRVPEALEVFREM 314
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 93/225 (41%), Gaps = 7/225 (3%)
Query: 132 VGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAK 191
+ + +G L G A+ ++ A+ DV N I+ AL + V +M++
Sbjct: 260 IKALTKKGKL-GTALKIYR--AMWEKQCKPDVVICNCIIDALCFKNRVPEALEVFREMSQ 316
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDF--GLKFDAESLNVVLWCLCQRLHV 249
+G P+ T + ++ F R ++ K ++L + D D + N +L L + +
Sbjct: 317 QGCLPNGATYNSLIKHFSRIRRMEKVYELLDEMLDKKGSCMPDHITFNYLLKALKKPEEL 376
Query: 250 GAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
L + + + TYN+++ ++ + E+ G PD +++ +I
Sbjct: 377 PLV--LERMERNGCMISTDTYNLILRLYADWDCEERVGDTWNEMEKLGLGPDRRSYTIMI 434
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
L GRI+DA+ F M KG + V S + + D D
Sbjct: 435 HWLYEKGRINDALHYFGEMTSKGMVSEPRTEMLVSSMNMKLKDND 479
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 174/357 (48%), Gaps = 1/357 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ ++ K G P L T + ++ + G A+Q+L ++E+ G K D + N V+ LC
Sbjct: 163 LFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLC 222
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ A F+ M + + NV+TY+ ++ G+ LGQ+ E + K+++ P+++
Sbjct: 223 KDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTV 282
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
TF+ L++GL + G I +A VF+ M E G PD Y+A++ Y DE K + M
Sbjct: 283 TFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIM 342
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
P++ Y LI+G KSR++ +A + EM DR + P T T ++ ++ C G P
Sbjct: 343 VGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRP 402
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A ++K+ G Y +LL L G L MQES IY +
Sbjct: 403 QVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNIL 462
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
I G+CN G+LE A + KG PS + Y+ + + LL A +FRK+ +
Sbjct: 463 IQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVV 519
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 167/385 (43%), Gaps = 36/385 (9%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A + +Y I+K L + +L M ++G PD+ + V+DS + + +A+
Sbjct: 173 APSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMY 232
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
+ D G+ + + + +L C + A+SLF M G+ V+ N +T+ I++ G
Sbjct: 233 FFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLC 292
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP--- 335
K G ++E RV + + G PD+ T+S L++G ++D+A ++FD M KG P
Sbjct: 293 KEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVR 352
Query: 336 --------------------------------DTNAYNAVISNYISVGDFDECMKYYKGM 363
DT Y+ ++ + G K +K M
Sbjct: 353 VYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEM 412
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
SY P+ TY+ L+ GL K + +A + + M + I P ++ +C++G
Sbjct: 413 CSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKL 472
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
AA ++ G + S+ Y +++ L G +++ +M +G + Y
Sbjct: 473 EAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVA 532
Query: 484 IAGLCNIGQLENAVLVMEESLRKGF 508
I G G NAV ++EE + +GF
Sbjct: 533 IQGFLRNGDPSNAVRLIEEMVGRGF 557
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 160/346 (46%), Gaps = 38/346 (10%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ--RLHVGAAS 253
P + + ++ S ++ I + +++ ++ + +L +++ CLC R HV A
Sbjct: 67 PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAF 126
Query: 254 SLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
S M K + +T+ +++G ++++ ++ EI GF+P +T++ +I+GL
Sbjct: 127 SALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGL 186
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
+ G +A+++ M+EKGC PD AYN VI + +E M ++ M PN+
Sbjct: 187 CKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNV 246
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
TY+ ++ G ++ +A +F++M+ R ++P+T T T ++ LC G M +
Sbjct: 247 VTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEG-------MILE 299
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
AR+V + M E+G D Y ++ G C Q
Sbjct: 300 ARRV----------------------------FEMMTENGVEPDAYTYSALMDGYCLQSQ 331
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++ A + + + KGF PS VY+ L N S +L A L ++
Sbjct: 332 MDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEM 377
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 177/381 (46%), Gaps = 12/381 (3%)
Query: 106 FLQKLKGKGVIEDAL-WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
L+K++ KG D + +N +D + + + EAM FF+ + + +V
Sbjct: 198 LLKKMEEKGCKPDVVAYNTVID--------SLCKDRRANEAMY-FFSEMVDQ-GIPPNVV 247
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y+ I+ + ++ M V P+ T +I++D + G + +A ++ +
Sbjct: 248 TYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMM 307
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
+ G++ DA + + ++ C + + A LF+ M GK +V YNI+I+G K ++
Sbjct: 308 TENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRL 367
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E + +L E+ +PD++T+S L++G +AGR A ++F M G PD+ Y+ +
Sbjct: 368 NEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSIL 427
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ G DE + K M EP++ Y LI G+ K+ A E+F + +GI
Sbjct: 428 LDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGI 487
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
PS T T + L G + A M++K GC + Y + ++ G +
Sbjct: 488 QPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVR 547
Query: 464 LWHEMQESGYPSDGEIYEYVI 484
L EM G+ +D ++ ++
Sbjct: 548 LIEEMVGRGFSADSSTFQMLL 568
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 119/258 (46%), Gaps = 1/258 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D +Y+ ++ + D + M +G P + +I+++ ++ ++ +A
Sbjct: 312 VEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAK 371
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGW 277
+L + D L D + + ++ CQ A LF M +L + +TY+I++ G
Sbjct: 372 TLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGL 431
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G + E R+LK + P ++ LI+G+ G+++ A E+F + KG P
Sbjct: 432 CKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSV 491
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +IS + G +E + ++ M C PN TY I G L++ ++A+ + EE
Sbjct: 492 VTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEE 551
Query: 398 MLDRGIVPSTGTITSFLE 415
M+ RG + T L+
Sbjct: 552 MVGRGFSADSSTFQMLLD 569
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 86/206 (41%), Gaps = 2/206 (0%)
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P + SNY ++ + + + + P + + +L+ L+K + + + +
Sbjct: 32 PSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISL 91
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHA--AMMMYKKARKVGCKLSLTAYKLLLRRL 452
++M I P+ T+T + LC H A K K+G + + + LL L
Sbjct: 92 CKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGL 151
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
K + L+ E+ + G+ Y +I GLC IG NA+ ++++ KG P
Sbjct: 152 CSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDV 211
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y+ + + L + A F ++
Sbjct: 212 VAYNTVIDSLCKDRRANEAMYFFSEM 237
>gi|449444202|ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
gi|449502917|ref|XP_004161779.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
Length = 532
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 203/411 (49%), Gaps = 5/411 (1%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
++ ++ K IE AL ++ L+ D V KV+ R +FFNW +K +
Sbjct: 99 LYFRRHKPVEDIERALSLCDLVLTDDFVLKVLRRHRSDWNPAFIFFNWVLKRGTNEEKFT 158
Query: 165 S----YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
YN I+ LG+ + F+ + VL +M+K + ET S++++ + A +V +AI +
Sbjct: 159 PGSVIYNEILVILGKFRRFEEVDKVLVEMSKRKELVNEETYSVLLNRYAAAHKVEEAISI 218
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKL 280
R ++FGL+ + + +L LC+ HV AA +LF+S K + + ++ T NI+++GW L
Sbjct: 219 FYRRQEFGLEMNLIAFQSLLMWLCRYKHVEAAETLFHSKKHEFVTDIKTSNIILNGWCVL 278
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G V E +R +EI+ PD T+ LI L + G++ A+++F M E+G D
Sbjct: 279 GNVHEAKRFWREIIESKCEPDIYTYGTLINSLTKKGKLGTALKLFRAMWERGLTTDVVIC 338
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I E ++ +K M+ C N+ TY LI L K R++ E+ EM +
Sbjct: 339 NCIIDALCFKKRIPEALEIFKEMNERGCAANVATYNTLIKHLCKIRRMEKVNELLNEMEE 398
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
R ++T F+ L S P +++++ + GCK++ Y L+LR +
Sbjct: 399 RKGSCWPNSVT-FIYLLGSVRGPEEVPVLFQRMERSGCKMTSDIYNLILRLYMDWDIQER 457
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
+ W+EM+E G D Y +I GL G+ ++ + E KG P
Sbjct: 458 VKSTWNEMKEMGLGPDRRSYTIMIHGLYEKGRTKDGLRYFNEMTLKGIMPE 508
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 128/284 (45%), Gaps = 26/284 (9%)
Query: 155 KHPNVAKDVKSYNVIVKA---LGR----RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
KH V D+K+ N+I+ LG ++F+ ++ + PD+ T +++S
Sbjct: 258 KHEFVT-DIKTSNIILNGWCVLGNVHEAKRFW-------REIIESKCEPDIYTYGTLINS 309
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFN 266
+ G++ A+++ + + GL D N ++ LC + + A +F M + N
Sbjct: 310 LTKKGKLGTALKLFRAMWERGLTTDVVICNCIIDALCFKKRIPEALEIFKEMNERGCAAN 369
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS--PDSLTFSFLIEGLGRAGRIDDAIEV 324
V TYN +I K+ ++ ++ +L E+ S P+S+TF +L LG ++ +
Sbjct: 370 VATYNTLIKHLCKIRRMEKVNELLNEMEERKGSCWPNSVTFIYL---LGSVRGPEEVPVL 426
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F M+ GC ++ YN ++ Y+ + + M P+ +YT +I GL +
Sbjct: 427 FQRMERSGCKMTSDIYNLILRLYMDWDIQERVKSTWNEMKEMGLGPDRRSYTIMIHGLYE 486
Query: 385 SRKVADALEVFEEMLDRGIVPSTGT-----ITSFLEPLCSYGPP 423
+ D L F EM +GI+P T T+ EP C P
Sbjct: 487 KGRTKDGLRYFNEMTLKGIMPEPKTEKLVNATNVKEPKCQKAEP 530
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 124/315 (39%), Gaps = 35/315 (11%)
Query: 260 KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
K K L N TY+++++ ++ +V E + G + + F L+ L R ++
Sbjct: 189 KRKELVNEETYSVLLNRYAAAHKVEEAISIFYRRQEFGLEMNLIAFQSLLMWLCRYKHVE 248
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
A +F + K + D N +++ + +G+ E ++++ + CEP++ TY LI
Sbjct: 249 AAETLFHSKKHEFVT-DIKTSNIILNGWCVLGNVHEAKRFWREIIESKCEPDIYTYGTLI 307
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
+ L K K+ AL++F M +RG+ ++ LC A+ ++K+ + GC
Sbjct: 308 NSLTKKGKLGTALKLFRAMWERGLTTDVVICNCIIDALCFKKRIPEALEIFKEMNERGCA 367
Query: 440 LSLTAYKLLLRRLSGF---GKCGMLLD-------------------------------LW 465
++ Y L++ L K LL+ L+
Sbjct: 368 ANVATYNTLIKHLCKIRRMEKVNELLNEMEERKGSCWPNSVTFIYLLGSVRGPEEVPVLF 427
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
M+ SG +IY ++ + E E G P R Y+ + + L
Sbjct: 428 QRMERSGCKMTSDIYNLILRLYMDWDIQERVKSTWNEMKEMGLGPDRRSYTIMIHGLYEK 487
Query: 526 NKLESAYNLFRKIKI 540
+ + F ++ +
Sbjct: 488 GRTKDGLRYFNEMTL 502
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 83/209 (39%), Gaps = 1/209 (0%)
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
E+ P + YN ++ F+E K MS N +TY+ L++ + KV
Sbjct: 154 EEKFTPGSVIYNEILVILGKFRRFEEVDKVLVEMSKRKELVNEETYSVLLNRYAAAHKVE 213
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
+A+ +F + G+ + S L LC Y AA ++ ++K + ++L
Sbjct: 214 EAISIFYRRQEFGLEMNLIAFQSLLMWLCRYKHVEAAETLFH-SKKHEFVTDIKTSNIIL 272
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
G W E+ ES D Y +I L G+L A+ + +G
Sbjct: 273 NGWCVLGNVHEAKRFWREIIESKCEPDIYTYGTLINSLTKKGKLGTALKLFRAMWERGLT 332
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++ + + + L ++ A +F+++
Sbjct: 333 TDVVICNCIIDALCFKKRIPEALEIFKEM 361
>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 215/448 (47%), Gaps = 5/448 (1%)
Query: 98 PEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWA--IK 155
P +RL + + K V E L + V ++ DV +V+ R + +G FF WA K
Sbjct: 35 PAKRLFKLIISCRKASAV-EHELDHSGVRVTPDVAERVLERLDNAGMLAYRFFEWARRQK 93
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
A V+SY+ +V +L + + + M +V++ M +EG ++ET I+M + RA +V
Sbjct: 94 RGGCAHTVRSYHTVVASLAKIRQYQLMWDVVAVMRREGA-VNVETFGIIMRKYARAQKVD 152
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVIS 275
+A+ +E +G+ + + N +L LC+ +V A +F+ M + + TY+I++
Sbjct: 153 EAVYTFNVMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNSRFSPDAKTYSILLE 212
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
GW + + +M V E++ G PD +T+ +++ L + GR+++A+ V M +GC P
Sbjct: 213 GWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGCQP 272
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
T Y+ ++ Y ++ + + M P++ Y L+S K++K +A V
Sbjct: 273 TTYIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVL 332
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
+M GI ++ T L L S G A ++++ K C+ Y ++++
Sbjct: 333 NDMEGHGITTNSRTWNIILNHLISLGRDDEAYKVFRRMIKC-CQPDCDTYTMMIKMFCEN 391
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
K M L +W M+ + + +I GLC+ ++ A +++E+ + KG P +
Sbjct: 392 DKVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKREVSQACVLLEDMIEKGIRPPGSTF 451
Query: 516 SKLSNKLLASNKLESAYNLFRKIKIARQ 543
KL LL + + L K+ I Q
Sbjct: 452 GKLRQLLLKEGRKDVLDFLVEKMNILIQ 479
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 190/389 (48%), Gaps = 7/389 (1%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
W IK DV ++NV++KAL R +L DM G+ PD +T + VM +I
Sbjct: 183 WGIK-----PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEE 237
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--NVMT 269
G + A+++ ++ +FG + S+NV++ C+ V A + M + F + T
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
+N +++G K G V ++ ++ EG+ PD T++ +I GL + G + +A+EV D M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
+ C P+T YN +IS +E + + ++S P++ T+ LI GL +R
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
A+E+FEEM +G P T ++ LCS G A+ M K+ GC S+ Y L+
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
K +++ EM+ G + Y +I GLC ++E+A +M++ + +G
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P + Y+ L ++ A ++ + +
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 183/410 (44%), Gaps = 9/410 (2%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
R A + FN A K PN + + Y I+ LGR FD M +L DM
Sbjct: 58 RSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMG 117
Query: 198 LETLSIVMDSFIR---AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ--RLHVGAA 252
T I+++S+ + ++ + + +++FGLK D N +L L L +
Sbjct: 118 TSTFLILIESYAQFELQDEILSVVDWM--IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEI 175
Query: 253 SSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
S S+ G + +V T+N++I + Q+ +L+++ + G PD TF+ +++G
Sbjct: 176 SHAKMSVWG-IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY 234
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE-PN 371
G +D A+ + + M E GC + N ++ + G ++ + + + MS+ + P+
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
T+ L++GL K+ V A+E+ + ML G P T S + LC G A+ +
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ C + Y L+ L + +L + G D + +I GLC
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
A+ + EE KG P Y+ L + L + KL+ A N+ ++++++
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 141/316 (44%), Gaps = 18/316 (5%)
Query: 98 PEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVV----------NRGNLSGEAMV 147
P+E + + L KG +++AL N+ + L + V + N + EA
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEAL-NMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
+F + V+++ +YN ++ L + + + ++ M EG PD T + ++
Sbjct: 492 IFDEMEVH--GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFN 266
F R G + KA ++ + G + D + ++ LC+ V AS L S++ K +
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS-PDSLTFSFLIEGLGR-AGRIDDAIEV 324
YN VI G + + E + +E++ + + PD++++ + GL G I +A++
Sbjct: 610 PHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDF 669
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
+ EKG P+ ++ + +++ +E + M + + + ++ GLLK
Sbjct: 670 LVELLEKGFVPEFSSLYMLAEGLLTLS-MEETLVKLVNMVMQKARFSEEEVS-MVKGLLK 727
Query: 385 SRKVADALEVFEEMLD 400
RK DAL +LD
Sbjct: 728 IRKFQDALATLGGVLD 743
>gi|15241508|ref|NP_196986.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173968|sp|Q9LEQ7.1|PP382_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g14820, mitochondrial; Flags: Precursor
gi|9755750|emb|CAC01881.1| putative protein [Arabidopsis thaliana]
gi|332004697|gb|AED92080.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 203/404 (50%), Gaps = 1/404 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L + +DLS D++ +V+ R + + FF WA + A D ++YN ++ L +
Sbjct: 147 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAK 206
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ F+ M +VL +M +G+ +ET +I M +F A + KA+ + ++ + K E+
Sbjct: 207 TRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVET 265
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
+N +L L + A LF+ +K + N+MTY ++++GW ++ ++E R+ +++
Sbjct: 266 INCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 325
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
G PD + + ++EGL R+ + DAI++F MK KG P+ +Y +I ++ +
Sbjct: 326 HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 385
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
++Y+ M +P+ YT LI+G +K+ E+ +EM ++G P T + ++
Sbjct: 386 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 445
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
+ + P +Y K + + S+ + ++++ M +W EM + G
Sbjct: 446 LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP 505
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
D Y +I GL + G+ A +EE L KG + Y+K +
Sbjct: 506 DDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFA 549
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 143/319 (44%), Gaps = 2/319 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V++ N ++ +LGR K VL D KE P++ T +++++ + R + +A ++
Sbjct: 263 VETINCLLDSLGRAKLGK-EAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 321
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+ D GLK D + NV+L L + + A LF+ MK K NV +Y I+I + K
Sbjct: 322 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 381
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ ++V G PD+ ++ LI G G ++D E+ M+EKG PD YN
Sbjct: 382 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 441
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A+I + + + Y M EP++ T+ ++ +R V++EM+ +
Sbjct: 442 ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK 501
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
GI P + T + L S G A ++ G K L Y G+ +
Sbjct: 502 GICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIF 561
Query: 462 LDLWHEMQESGYPSDGEIY 480
+L + SG + EI+
Sbjct: 562 EELAQRAKFSGKFAAAEIF 580
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC------GPDTNAYNAVISNYIS 349
+GF+ DS T++ ++ L + + + + V + M KG A+ A +
Sbjct: 188 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKA 247
Query: 350 VGDFDECMKYYK---GMSSYNC-------------------------EPNMDTYTRLISG 381
VG F E MK YK G+ + NC PNM TYT L++G
Sbjct: 248 VGIF-ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNG 306
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
+ R + +A ++ +M+D G+ P LE L A+ ++ + G +
Sbjct: 307 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN 366
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ +Y +++R ++ + +M +SG D +Y +I G +L+ +++
Sbjct: 367 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 426
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKL-ESAYNLFRKI 538
E KG P Y+ L KL+A+ K+ E ++ K+
Sbjct: 427 EMQEKGHPPDGKTYNALI-KLMANQKMPEHGTRIYNKM 463
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 217/466 (46%), Gaps = 3/466 (0%)
Query: 76 KESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKV 135
K +N+ R +SS VDEF E++ + +E AL V + + +V
Sbjct: 53 KTQENNTSDRDNSSSKVDEFAKDVEKVYRILRNFHSRVPKLELALQESGVTMRAGLTERV 112
Query: 136 VNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKE-GV 194
+NR +G FF WA K P ++Y +VK + + F + +L +M K+ V
Sbjct: 113 LNRCGDAGNLGYRFFVWASKQPGYRHSYENYKAMVKIFSKMRQFGAVWALLEEMRKDNSV 172
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
E +++ F A V KAI++L + +G + D +L LC+ V A+S
Sbjct: 173 LITSELFIVLIRRFASARLVEKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKQAAS 232
Query: 255 LFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
LF M+ + ++ + ++ GW + G+++E + VL ++ GF PD + F+ L+
Sbjct: 233 LFEDMRVRFSPSLRHFTSLLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSM 292
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
AG++ DA ++ M KGC P+ N+Y +I + S DE M+ + M CE ++ T
Sbjct: 293 AGKMTDAFDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVT 352
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
YT LISG K K+ ++ + M +G +P+ T L + + + R
Sbjct: 353 YTALISGFCKWGKINRGYQILDAMKQKGHMPNQLTYLRILLAHEKKEELEECLELIESMR 412
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
VGC L+ Y +++R G+ + +W+EM+ S + + + + +I G G L
Sbjct: 413 MVGCVPDLSIYNVVIRLACKLGEVKQGVQIWNEMEASDFSPELDTFVIMIHGFLGQGCLV 472
Query: 495 NAVLVMEESLRKGF--CPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
A +E + +G P + +L N LL KL A +++ I
Sbjct: 473 EACEYFKEMIGRGLLTTPQYGILKELLNALLRGEKLGMAKDVWSCI 518
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 112/259 (43%), Gaps = 3/259 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+ SY ++++A ++ D V +M + G D+ T + ++ F + G++ + Q+L
Sbjct: 314 NANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALISGFCKWGKINRGYQIL 373
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKL 280
++ G + + +L ++ + L SM+ + ++ YN+VI KL
Sbjct: 374 DAMKQKGHMPNQLTYLRILLAHEKKEELEECLELIESMRMVGCVPDLSIYNVVIRLACKL 433
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG--CGPDTN 338
G+V + ++ E+ A FSP+ TF +I G G + +A E F M +G P
Sbjct: 434 GEVKQGVQIWNEMEASDFSPELDTFVIMIHGFLGQGCLVEACEYFKEMIGRGLLTTPQYG 493
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
+++ + + + + CE N D +T I L + V +A +M
Sbjct: 494 ILKELLNALLRGEKLGMAKDVWSCIVTKGCELNADAWTIWIHSLFSNGHVKEACSYCLDM 553
Query: 399 LDRGIVPSTGTITSFLEPL 417
++ I+P T + L
Sbjct: 554 MEADIMPKPETFAKLMRGL 572
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 210/430 (48%), Gaps = 27/430 (6%)
Query: 115 VIEDALWNVN-VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKAL 173
V+ + L +N VD ++ ++GK+ F I HP + ++N ++ L
Sbjct: 128 VLINCLCRLNHVDFAVSILGKM--------------FKLGI-HPTAS----TFNALINGL 168
Query: 174 GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA 233
+ ++M + G P++ + + +++ + G A+ + ++E G K D
Sbjct: 169 CNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDV 228
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
+ N ++ LC+ V A + M + + NV TYN ++ G+ LGQ+ E R+ KE
Sbjct: 229 VTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKE 288
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+V PD++T + L++GL + G + +A VF+TM EKG P+ + YNA++ Y
Sbjct: 289 MVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRL 348
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
+E K ++ M C P + +Y LI+G KSR++ +A + EM + + P T T ++
Sbjct: 349 MNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYST 408
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQ 469
++ LC +G P A+ ++K+ G +L Y +L L GF K G L L L MQ
Sbjct: 409 LMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSIL---LDGFCKHGHLDEALKLLKSMQ 465
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
E + + +I G+ G+LE A + + G P+ Y+ + LL +
Sbjct: 466 EKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSD 525
Query: 530 SAYNLFRKIK 539
AY+LFRK++
Sbjct: 526 EAYDLFRKME 535
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 197/409 (48%), Gaps = 12/409 (2%)
Query: 137 NRGNLS-GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
N N+S +A+ F+ +P + V + + + ++K + + ++ + M GV
Sbjct: 63 NSTNISIDDALASFYRMVRMNPRPS--VAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVT 120
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
++ +L+++++ R V A+ +LG++ G+ A + N ++ LC + A L
Sbjct: 121 HNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVEL 180
Query: 256 FNSM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
FN M +G NV++YN +I+G K G V K++ G PD +T++ +I+ L
Sbjct: 181 FNEMVRRGHEP-NVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLC 239
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+ ++DA+E M ++G P+ YN ++ + +G +E + +K M + P+
Sbjct: 240 KDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTV 299
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
T T L+ GL K V++A VFE M ++G+ P+ T + ++ C + A +++
Sbjct: 300 TLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIM 359
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNI 490
+ GC + +Y +L ++GF K + + L EM D Y ++ GLC
Sbjct: 360 IRQGCAPGVHSYNIL---INGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQF 416
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G+ + A+ + +E G P+ + YS L + L+ A L + ++
Sbjct: 417 GRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQ 465
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 191/412 (46%), Gaps = 10/412 (2%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIK---HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLS 187
++ + N G + EA+ LF N ++ PNV SYN I+ L + +V
Sbjct: 164 LINGLCNEGKIK-EAVELF-NEMVRRGHEPNVI----SYNTIINGLCKTGNTSMAVDVFK 217
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
M + G PD+ T + ++DS + V A++ L + D G+ + + N ++ C
Sbjct: 218 KMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILG 277
Query: 248 HVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
+ A+ LF M G+ V+ + +T I++ G K G V E V + + +G P+ T++
Sbjct: 278 QLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYN 337
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
L++G +++A +VF+ M +GC P ++YN +I+ + DE M
Sbjct: 338 ALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHK 397
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
P+ TY+ L+ GL + + +AL +F+EM G++P+ T + L+ C +G A
Sbjct: 398 ALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEA 457
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ + K ++ + ++ + +L+ + GK + +L+ ++ G Y +I G
Sbjct: 458 LKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKG 517
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
L G + A + + GF P+ Y+ + L + +A L ++
Sbjct: 518 LLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEM 569
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 170/348 (48%), Gaps = 1/348 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN I+ +L + + + LS+M G+ P++ T + ++ F GQ+ +A ++
Sbjct: 227 DVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLF 286
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ + D +L +++ LC+ V A +F +M K V N+ TYN ++ G+
Sbjct: 287 KEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQ 346
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ E ++V + ++ +G +P +++ LI G ++ R+D+A + M K PDT Y
Sbjct: 347 RLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTY 406
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ ++ G E + +K M SY PN+ TY+ L+ G K + +AL++ + M +
Sbjct: 407 STLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQE 466
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+ + P+ T +E + G A ++ K G + ++ Y ++++ L G
Sbjct: 467 KKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDE 526
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
DL+ +M++ G+ + Y +I G A+ +++E + K F
Sbjct: 527 AYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRF 574
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 149/311 (47%), Gaps = 10/311 (3%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
+++ G+ V+ D V L++ V G + + + EA ++F + V ++ +
Sbjct: 285 LFKEMVGRDVMPDT-----VTLTILVDG--LCKEGMVSEARLVF--ETMTEKGVEPNIST 335
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN ++ ++ + V M ++G P + + +I+++ F ++ ++ +A +L +
Sbjct: 336 YNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMY 395
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVV 284
L D + + ++ LCQ A ++F M +L N++TY+I++ G+ K G +
Sbjct: 396 HKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLD 455
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E ++LK + + P+ + + LIEG+ AG+++ A E+F + G P Y +I
Sbjct: 456 EALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMI 515
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ G DE ++ M PN +Y +I G L+++ + A+ + +EM+ +
Sbjct: 516 KGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFS 575
Query: 405 PSTGTITSFLE 415
+ T L+
Sbjct: 576 ANLSTFQMLLD 586
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 80/188 (42%), Gaps = 2/188 (1%)
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P N +SN + D+ + + M N P++ + + + K ++ + + +
Sbjct: 53 PQNNG--GFVSNNSTNISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSL 110
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+M G+ + ++ + LC A+ + K K+G + + + L+ L
Sbjct: 111 CNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCN 170
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK ++L++EM G+ + Y +I GLC G AV V ++ + G P +
Sbjct: 171 EGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVT 230
Query: 515 YSKLSNKL 522
Y+ + + L
Sbjct: 231 YNTIIDSL 238
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 187/392 (47%), Gaps = 2/392 (0%)
Query: 149 FFNWAIKHPNV-AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
FFNWA + K YN ++ G+ + FD +++ M V +ET +I++
Sbjct: 136 FFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRR 195
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNV 267
++RAG +A+ R+ED+G D + ++V+ L ++ A S F+S+K + +V
Sbjct: 196 YVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDV 255
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+ Y ++ GW + G++ E E+V KE+ G P+ T+S +I+ L R G+I A +VF
Sbjct: 256 IVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFAD 315
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M + GC P+ +N ++ ++ G ++ ++ Y M CEP+ TY LI +
Sbjct: 316 MLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDEN 375
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A++V M+ + + T + + + A MY K + C+ + Y +
Sbjct: 376 LENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNI 435
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL-RK 506
L+R G M+L + EM + + Y ++ C +G NA + +E + K
Sbjct: 436 LMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEK 495
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
PS +Y + +L + +L+ L K+
Sbjct: 496 CLTPSLSLYEMVLAQLRRAGQLKKHEELVEKM 527
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 122/248 (49%), Gaps = 2/248 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +V +Y++++ AL R +V +DM G P+ T + +M ++AG+ K +
Sbjct: 286 IEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVL 345
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
Q+ +++ G + D + N ++ C+ ++ A + N+M K K N T+N +
Sbjct: 346 QVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYI 405
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K V R+ +++ P+++T++ L+ + D +++ M +K P+
Sbjct: 406 EKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNV 465
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNC-EPNMDTYTRLISGLLKSRKVADALEVFE 396
N Y +++ + +G ++ K +K M C P++ Y +++ L ++ ++ E+ E
Sbjct: 466 NTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVE 525
Query: 397 EMLDRGIV 404
+M+ +G+V
Sbjct: 526 KMIQKGLV 533
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 225/481 (46%), Gaps = 12/481 (2%)
Query: 63 FQISS--HNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDAL 120
F IS +N F V R N + + + DEF E++ + +E +L
Sbjct: 34 FHISRVLNNDF--VESTERKNGLGLVFPEKHEDEFAGDVEKIYRILRNYHSRVPKLELSL 91
Query: 121 WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFD 180
+DL ++ +V++R +G FF WA K P + +VK L + + F
Sbjct: 92 NESGIDLRPGLIVRVLSRCGDAGNLGYRFFLWATKQPGYCHSYEVCKSMVKILSKMRQFG 151
Query: 181 FMCNVLSDMAKEGVNPDL---ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLN 237
+ ++ +M KE NP+L E +++ F A V KA+++L + +G + D
Sbjct: 152 AVWGLIEEMRKE--NPELIEPELFVVLIRRFASANMVKKAVEVLDEMPKYGFEPDEYVFG 209
Query: 238 VVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
+L LC+ V AS +F M+ K+ N+ + ++ GW + G+++E + VL ++ G
Sbjct: 210 CLLDALCKNGSVKDASKVFEDMREKIPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAG 269
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD-FDEC 356
PD + F+ L+ G AG++ DA ++ + M+++G P+ N Y +I DE
Sbjct: 270 LEPDIVVFTNLLSGYAHAGKMADAYDLLNDMRKRGYEPNANCYTVLIQALCRTEKRMDEA 329
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
M+ + M Y CE ++ TYT LISG K + V ++M +G++PS T L
Sbjct: 330 MRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVA 389
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
+ + +K +++GC L Y +++R F + + LW+EM+ +G
Sbjct: 390 HEKKEQFEECLELIEKMKQIGCHPDLLIYNVVIRLACNFREVKEAVRLWNEMEANGLSPG 449
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGF--CPSRLVYSKLSNKLLASNKLESAYNL 534
+++ +I G + G L A +E + +G P L N LL +KLE A ++
Sbjct: 450 ADMFVIMINGFTSQGYLIEACSHFKEMVSRGIFSAPQYGTLKSLLNTLLRDDKLEMAKDV 509
Query: 535 F 535
+
Sbjct: 510 W 510
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 139/346 (40%), Gaps = 51/346 (14%)
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWC----LCQRL--------HVGAASSLF 256
+R G + + + G + G +F + +C +C+ + GA L
Sbjct: 98 LRPGLIVRVLSRCGDAGNLGYRFFLWATKQPGYCHSYEVCKSMVKILSKMRQFGAVWGLI 157
Query: 257 NSMKGK--VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
M+ + L + ++I ++ V + VL E+ GF PD F L++ L +
Sbjct: 158 EEMRKENPELIEPELFVVLIRRFASANMVKKAVEVLDEMPKYGFEPDEYVFGCLLDALCK 217
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G + DA +VF+ M+EK P+ + +++ + G E + M EP++
Sbjct: 218 NGSVKDASKVFEDMREK-IPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVV 276
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC-SYGPPHAAMMMYKKA 433
+T L+SG + K+ADA ++ +M RG P+ T ++ LC + AM ++ +
Sbjct: 277 FTNLLSGYAHAGKMADAYDLLNDMRKRGYEPNANCYTVLIQALCRTEKRMDEAMRVFVEM 336
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
+ GC+ + Y L I+G C G +
Sbjct: 337 ERYGCEADIVTYTAL-----------------------------------ISGFCKWGMI 361
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ V+++ +KG PS++ Y ++ + E L K+K
Sbjct: 362 DKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEECLELIEKMK 407
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 221/431 (51%), Gaps = 6/431 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
++ +L N V++S ++V V+N+ + +G + FF WA K + + ++ +++ALG+
Sbjct: 73 VDVSLRNFPVEVSPELVVAVLNKLSNAGILALSFFRWAEKQQGFNHNTEIFHALIEALGK 132
Query: 176 RKFFDFMCNVLSDMAKEGV-NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
+ F + N++ +M + + N D T S++ ++RA + +A++ R+E +GLK
Sbjct: 133 IRQFKMIWNLVDEMKQRKLLNGD--TFSLIARRYVRAKVIKEALKTFERMEKYGLKPQIS 190
Query: 235 SLNVVLWCLCQ-RLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKE 292
N ++ LC+ + HV A LF+ M+ L N+ +Y I+I GWS+ +++++ V +E
Sbjct: 191 DFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNLKSYTILIEGWSQQQNLLKVDEVCRE 250
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+ +GF PD +T+ +I +A + D+AI ++ M K P + Y I+ +
Sbjct: 251 MKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSPHIYCTFITGLGNGSR 310
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
DE ++++ + P TY ++S S ++ DA + EM + GI P+ T
Sbjct: 311 MDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDI 370
Query: 413 FLEPLCSYGPPHAAMMMYKK-ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
L L G A ++++ + + GC+ S++ Y +++R + M + +W+EM++
Sbjct: 371 ILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDMAMVVWNEMKDK 430
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G ++ +I LC+ +L++A ++ L G P+ ++S L+A+ +
Sbjct: 431 GILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIRPTANMFSAFKRALMAAGMENTV 490
Query: 532 YNLFRKIKIAR 542
+ +K+ R
Sbjct: 491 IHFAKKVDKLR 501
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 191/378 (50%), Gaps = 1/378 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D YN+ + AL + + S M EG+ D+ T ++++ + +A Q+ AI ML
Sbjct: 122 DTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILML 181
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKL 280
+ + GLK D + ++ + + A + M G L ++ ++++G+ K
Sbjct: 182 EEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKE 241
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+V E R + E+ EGFSPD +TF+ L+ G R G ++DA+++ D M EKG PD Y
Sbjct: 242 GRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTY 301
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N++IS +G+F++ ++ + M C PN TY LIS L K ++ A ++ ++
Sbjct: 302 NSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVS 361
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G++P T + ++ LC AM M+++ + GCK Y +L+ L +
Sbjct: 362 KGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKE 421
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L L EM+ SG + +Y +I GLC ++E+A + ++ G S + Y+ L +
Sbjct: 422 ALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLID 481
Query: 521 KLLASNKLESAYNLFRKI 538
L + ++E A L ++
Sbjct: 482 GLCKNKRVEEASQLMDQM 499
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 162/352 (46%), Gaps = 1/352 (0%)
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
++++EG +PD T + +++ F R G V A+ ++ + + G D + N ++ +C+
Sbjct: 253 EVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLG 312
Query: 248 HVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
A + M + N +TYN +IS K ++ + + +V++G PD TF+
Sbjct: 313 EFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFN 372
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
LI+GL + D A+E+F+ MK KGC PD Y+ +I + E + K M S
Sbjct: 373 TLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESS 432
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
C N Y LI GL KSR++ DA E+F++M G+ S+ T + ++ LC A
Sbjct: 433 GCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEA 492
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ + G K Y LL G D+ M +G D Y +I G
Sbjct: 493 SQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGG 552
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
LC G+++ A ++ KG + Y+ + L + + LFR++
Sbjct: 553 LCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREM 604
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 185/409 (45%), Gaps = 61/409 (14%)
Query: 124 NVDLSLDVVGKVVNRGN----------LSGEAMVLFFNWAIK----------HPNVAKDV 163
NV+ +LD+V ++ +G +SG + F AI+ PN
Sbjct: 278 NVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTV--- 334
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+YN ++ AL + + ++ + +G+ PD+ T + ++ + A++M
Sbjct: 335 -TYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEE 393
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQ 282
+++ G K D + ++++ LC + A L M+ N + YN +I G K +
Sbjct: 394 MKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRR 453
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ + E + ++ G S S+T++ LI+GL + R+++A ++ D M +G PD YN+
Sbjct: 454 IEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNS 513
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+++ + VGD ++ + M+S CEP++ TY LI GL ++ +V A ++ + +G
Sbjct: 514 LLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKG 573
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
IV L P +Y P A+ M K+ ++ GM
Sbjct: 574 IV---------LTPH-AYNPVIQALFMRKRTKE-----------------------GM-- 598
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCN-IGQLENAVLVMEESLRKGFCP 510
L+ EM E P D ++ V GLCN G ++ A+ E L KG P
Sbjct: 599 RLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILP 647
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 180/398 (45%), Gaps = 38/398 (9%)
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNV 238
FD + +L + G P+ T + ++ SF ++ +++L + G K D N+
Sbjct: 71 FDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILEN--ELGFKPDTNFYNI 128
Query: 239 VLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
L L + + L + M + ++ +V T+N++I K Q+ +L+E+ G
Sbjct: 129 ALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHG 188
Query: 298 FSPDSLTFSFLIEG-----------------LG------------------RAGRIDDAI 322
PD +TF+ L++G LG + GR+++A+
Sbjct: 189 LKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEAL 248
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+ E+G PD +N++++ + +G+ ++ + M +P++ TY LISG+
Sbjct: 249 RFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGM 308
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K + A+E+ ++M+ R P+T T + + LC AA + + G +
Sbjct: 309 CKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDV 368
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
+ L++ L + ++++ EM+ G D Y +I LC +L+ A+++++E
Sbjct: 369 CTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKE 428
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
G + +VY+ L + L S ++E A +F ++++
Sbjct: 429 MESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMEL 466
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 8/247 (3%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V++ +YN ++ L + K + ++ M EG+ PD T + ++ F R G + KA
Sbjct: 469 VSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAG 528
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS--MKGKVLFNVMTYNIVISG 276
++ + G + D + ++ LC+ V AS L S MKG VL YN VI
Sbjct: 529 DIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVL-TPHAYNPVIQA 587
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR-AGRIDDAIEVFDTMKEKGCGP 335
+ E R+ +E++ + PD+LT + GL G I +AI+ M EKG P
Sbjct: 588 LFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILP 647
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM-DTYTRLISGLLKSRKVADALEV 394
+ ++ + S+ D ++ + + M + T +I G LK RK DAL
Sbjct: 648 EFPSFGFLAEGLCSLSMEDTLIELINMVME---KAQMSERETSMIRGFLKIRKFNDALAN 704
Query: 395 FEEMLDR 401
+LDR
Sbjct: 705 LGGILDR 711
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 121/277 (43%), Gaps = 37/277 (13%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA++L ++ A++ YN ++ L + + + + M GV+ T +
Sbjct: 421 EALMLL--KEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNT 478
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++D + +V +A Q++ ++ GLK D
Sbjct: 479 LIDGLCKNKRVEEASQLMDQMIMEGLKPDK------------------------------ 508
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
TYN +++ + ++G + + +++ + + G PD T+ LI GL RAGR+D A +
Sbjct: 509 ----FTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASK 564
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+ +++ KG +AYN VI E M+ ++ M + P+ T+ + GL
Sbjct: 565 LLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLC 624
Query: 384 K-SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ +A++ EML++GI+P + E LCS
Sbjct: 625 NGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCS 661
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 218/460 (47%), Gaps = 41/460 (8%)
Query: 117 EDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRR 176
E AL L+ VVGKV+ +G +G+A + FF+WA D + N +++AL R
Sbjct: 799 ETALERFTGKLTTTVVGKVL-QGVRNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRL 857
Query: 177 KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESL 236
K V + K +P++ T +I++ RAG + A ++L + G+ +
Sbjct: 858 KRPKDALQVYRN--KLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILH 915
Query: 237 NVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
NVV+ LC + +A LF M+ G +V TY+ ++ K G+V + R+++++V
Sbjct: 916 NVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMV 975
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
++G SP+ +T+S L+ GL +AG++D+A + M GC P+ YN +I + +G D
Sbjct: 976 SKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRID 1035
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E + M C+PN+ TYT L+ K K DA+ + E M+++G VP+ T S L
Sbjct: 1036 EAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLL 1095
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC--GMLL---------- 462
+ C A + + GC ++ +Y ++ L K G+LL
Sbjct: 1096 DMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCV 1155
Query: 463 -----------------------DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+L++ +QESG + Y ++ GLC + + A +
Sbjct: 1156 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYL 1215
Query: 500 MEESLRKGFC-PSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ E RK C P + Y+ + + L S +++ AY LF ++
Sbjct: 1216 LREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQM 1255
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 181/379 (47%), Gaps = 1/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV SY ++ L + D C V+ M + G P++ T ++D F R G + A++++
Sbjct: 299 DVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELV 358
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
++ + G + +A + N ++ C+R + A + M + + + Y+ +ISG+ K
Sbjct: 359 RKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKA 418
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ E +L++++ G PD S LI+ L +A ID A E+ C PD AY
Sbjct: 419 GKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAY 478
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +I E + M C P++ TY ++ GL KSR++ DA +F+ M
Sbjct: 479 SILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRA 538
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G++P T + + C +A M ++ ++ C + Y L+ L G
Sbjct: 539 AGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDK 598
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
D++ EM G + Y +I GLC I ++E A ++E ++ P + Y+ L N
Sbjct: 599 AFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLIN 658
Query: 521 KLLASNKLESAYNLFRKIK 539
L +++LE A+ + R++K
Sbjct: 659 GLCNASRLEEAWRVLREMK 677
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 204/456 (44%), Gaps = 11/456 (2%)
Query: 79 RSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNR 138
+ NS++R+D D + ER+ +Q + + AL LS ++VGKV+ R
Sbjct: 47 KKNSLRRVDRWVGSDSPISVLERI----VQGASDEQALRVALDEYRGQLSPEIVGKVLQR 102
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
G A+V FF WA ++ N ++ L + + ++ + D
Sbjct: 103 LIDPGAALV-FFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDT 161
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
T S ++ FIRAG++ A ++ + GLK A +L LC A F
Sbjct: 162 VTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFRE 221
Query: 259 MKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
M + +TYN +I+G SK ++ + R+L+E+V GF+P+ +++ ++ G +A R+
Sbjct: 222 MSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRV 281
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
++A+ + + M +GC PD +Y VI+ + DE + M C+PN+ TY L
Sbjct: 282 ENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTL 341
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
+ G + + A+E+ +M +RG P+ T + + C A + + + GC
Sbjct: 342 VDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGC 401
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLL---DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
Y + +SGF K G L DL +M G D +I LC +++
Sbjct: 402 PPDAINYSTI---ISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDS 458
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
A ++ S+ P + YS L + L + +L A
Sbjct: 459 AQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEA 494
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 188/388 (48%), Gaps = 12/388 (3%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PN+ +YN I+ + D ++L +M G P++ T ++++D+F + G+
Sbjct: 1016 PNIV----TYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAED 1071
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVIS 275
AI ++ + + G + + N +L C++ V A L +SM K + NV++YN VI+
Sbjct: 1072 AIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIA 1131
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G K +V E +L+++++ PD +TF+ +I+ + + R+D A E+F+ ++E GC P
Sbjct: 1132 GLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTP 1191
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMS-SYNCEPNMDTYTRLISGLLKSRKVADALEV 394
+ YN+++ FD+ + M+ C P++ TY +I GL KS++V A ++
Sbjct: 1192 NLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKL 1251
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F +ML G+ P T + + LC + A + + K G Y L + G
Sbjct: 1252 FLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTL---IDG 1308
Query: 455 FGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
F K G L L++ + G D + I L G+L A ++E LR G P
Sbjct: 1309 FCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPD 1368
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ Y+ L ++ E A +LF ++
Sbjct: 1369 TVTYNTLLKGFCDASLTEDAVDLFEVMR 1396
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 177/373 (47%), Gaps = 7/373 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ ++ + C +LS M ++G P++ + + V+ +A +V++ + +L ++
Sbjct: 1090 TYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQM 1149
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQV 283
D + N ++ +C+ V A LFN ++ N++TYN ++ G K +
Sbjct: 1150 LSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRF 1209
Query: 284 VEMERVLKEIV-AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ E +L+E+ +G SPD +T++ +I+GL ++ R+D A ++F M G PD Y+
Sbjct: 1210 DQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSI 1269
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
VIS+ DE + M +P TY LI G K+ + ALE+ + +L +G
Sbjct: 1270 VISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKG 1329
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P T + F++ L G A + + + G Y LL+ +
Sbjct: 1330 SYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAV 1389
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL-RKGFCPSRLVYSKLSNK 521
DL+ M++ G D Y ++ L + ++ + + +S+ GF + +LS+K
Sbjct: 1390 DLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGF----KLNHELSSK 1445
Query: 522 LLASNKLESAYNL 534
L AS ++E+ L
Sbjct: 1446 LEASIEVEADVRL 1458
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 144/312 (46%), Gaps = 2/312 (0%)
Query: 228 GLKFDAESLNVVLWCLCQRLHVGAASSLFNS-MKGKVLFNVMTYNIVISGWSKLGQVVEM 286
G + + N +L L + A LF S ++G+ + +TY+ +ISG+ + G+++
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
+ E+ +G + ++ GL AG+ DA+ F M K C PD+ YN +I+
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS-KTCPPDSVTYNTMING 239
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
D+ ++ + M PN+ +Y ++ G K+ +V +AL + E+M+ RG P
Sbjct: 240 LSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPD 299
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
+ T+ + LC A + K + GC+ ++ Y L+ G ++L
Sbjct: 300 VVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVR 359
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
+M E GY + Y ++ C +E A V++ ++ G P + YS + + +
Sbjct: 360 KMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAG 419
Query: 527 KLESAYNLFRKI 538
KL A++L ++
Sbjct: 420 KLREAHDLLEQM 431
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 139/298 (46%), Gaps = 6/298 (2%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV SYN ++ L + +L M PD+ T + ++D+ + +V
Sbjct: 1121 PNVV----SYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDI 1176
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK--VLFNVMTYNIVI 274
A ++ +++ G + + N ++ LC+ A L M K +++TYN VI
Sbjct: 1177 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVI 1236
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G K +V ++ +++++G +PD +T+S +I L + +D+A V + M + G
Sbjct: 1237 DGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFD 1296
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P Y +I + G+ D+ ++ + + S P++ T++ I L K ++ A E+
Sbjct: 1297 PGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGEL 1356
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
E ML G+VP T T + L+ C A+ +++ R+ GC+ Y L+ L
Sbjct: 1357 LETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 1414
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 144/343 (41%), Gaps = 64/343 (18%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+A D +Y++++ +L + +F D NVL M K G +P T ++D F + G + KA+
Sbjct: 1260 LAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKAL 1319
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
++L L G D V+T++I I S
Sbjct: 1320 EILQLLLSKGSYPD----------------------------------VVTFSIFIDWLS 1345
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G++ + +L+ ++ G PD++T++ L++G A +DA+++F+ M++ GC PD
Sbjct: 1346 KRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNA 1405
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
Y ++ + + K YK + + + +DT +L L S K+ ++EV ++
Sbjct: 1406 TYTTLVGHLVD-------KKSYKDLLAEVSKSMVDTGFKLNHEL--SSKLEASIEVEADV 1456
Query: 399 -LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL---SLTAYKLLLRRLSG 454
L IV G G P A +++ + L L Y +
Sbjct: 1457 RLGCAIVDMFGKC----------GSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQA 1506
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
FG LW M G D + ++ C+ G L+ AV
Sbjct: 1507 FG-------LWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAV 1542
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 189/389 (48%), Gaps = 7/389 (1%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
W IK DV ++NV++KAL R +L DM G+ PD +T + +M +I
Sbjct: 183 WGIK-----PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEE 237
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--NVMT 269
G + A+++ ++ +FG + S+NV++ C+ V A + M + F + T
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
+N +++G K G V ++ ++ EG+ PD T++ +I GL + G + +A+E D M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMI 357
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
+ C P+T YN +IS +E + + ++S P++ T+ LI GL +R
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
A+E+FEEM +G P T ++ LCS G A+ M K+ GC S+ Y L+
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
K +++ EM+ G + Y +I GLC ++E+A +M++ + +G
Sbjct: 478 DGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQK 537
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P + Y+ L ++ A ++ + +
Sbjct: 538 PDKFTYNSLLTHFCRGGDIKKAADIVQAM 566
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 191/396 (48%), Gaps = 4/396 (1%)
Query: 151 NWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR 210
+W I + D YN ++ L + + M+ G+ PD+ T ++++ + R
Sbjct: 142 HWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCR 201
Query: 211 AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVM 268
A Q+ AI ML + +GL D ++ ++ + + A + M G NV
Sbjct: 202 AHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNV- 260
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIV-AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+ N+++ G+ K G+V + ++E+ +GF PD TF+ L+ GL +AG + AIE+ D
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M ++G PD YN+VIS +G+ E +++ M + +C PN TY LIS L K +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
V +A E+ + +GI+P T S ++ LC AM ++++ R GC+ Y +
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L+ L GK L++ +M+ SG Y +I G C ++ A + +E G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHG 500
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
+ + Y+ L + L S ++E A L ++ + Q
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQ 536
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 191/420 (45%), Gaps = 19/420 (4%)
Query: 136 VNRGNLSG-----EAMVLF-FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDM 189
+ G+L G E MV F +W+ NV S NVIV + + N + +M
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWS----NV-----SVNVIVHGFCKEGRVEDALNFIQEM 285
Query: 190 A-KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
+ ++G PD T + +++ +AG V AI+++ + G D + N V+ LC+
Sbjct: 286 SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGE 345
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
V A + M + N +TYN +IS K QV E + + + ++G PD TF+
Sbjct: 346 VKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 405
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI+GL A+E+F+ M+ KGC PD YN +I + S G DE + K M
Sbjct: 406 LIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
C ++ TY LI G K+ K+ +A E+F+EM G+ ++ T + ++ LC A
Sbjct: 466 CARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAS 525
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+ + G K Y LL G D+ M +G D Y +I+GL
Sbjct: 526 QLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYA 547
C G++E A ++ KG + Y+ + L K A NLFR ++ QN+ A
Sbjct: 586 CKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFR--EMLEQNEAA 643
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 140/316 (44%), Gaps = 18/316 (5%)
Query: 98 PEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVV----------NRGNLSGEAMV 147
P+E + + L KG +++AL N+ + L + V + N EA
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEAL-NMLKQMELSGCARSVITYNTLIDGFCKANKIREAEE 491
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
+F + V+++ +YN ++ L + + + ++ M EG PD T + ++
Sbjct: 492 IFDEMEVH--GVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTH 549
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFN 266
F R G + KA ++ + G + D + ++ LC+ V AS L S++ K +
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALT 609
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEG-FSPDSLTFSFLIEGLGR-AGRIDDAIEV 324
YN VI G + + E + +E++ + +PD++++ + GL G I +A++
Sbjct: 610 PHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDF 669
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
+ EKG P+ ++ + +++ +E + M + + + ++ GLLK
Sbjct: 670 LVELLEKGFVPEFSSLYMLAEGLLTLS-MEETLVKLVNMVMQKARFSEEEVS-MVKGLLK 727
Query: 385 SRKVADALEVFEEMLD 400
RK DAL +LD
Sbjct: 728 IRKFQDALATLGGVLD 743
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 203/420 (48%), Gaps = 26/420 (6%)
Query: 124 NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMC 183
+VD S+ V+GK+ F I HP D ++N ++ L
Sbjct: 143 HVDFSVSVLGKM--------------FKLGI-HP----DAITFNALINGLCNEGKIKEAV 183
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
+ ++M K G P++ + + V++ + G A+ + ++E G K + + + ++ L
Sbjct: 184 ELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSL 243
Query: 244 CQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C+ V A + M + + NV TYN ++ G+ LGQ+ E R+ KE+V P++
Sbjct: 244 CKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNT 303
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+TF+ L++GL + G + +A VF+TM EKG PD + YNA++ Y +E K ++
Sbjct: 304 VTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEI 363
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M C P +Y LI+G KSR++ +A + EM + + P T T ++ ++ LC G
Sbjct: 364 MIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGR 423
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEI 479
P A+ ++K+ G +L Y +L L GF K G L L L M+E +
Sbjct: 424 PKEALNLFKEMCSYGPHPNLVTYVIL---LDGFCKHGHLDEALKLLKSMKEKKLEPNIVH 480
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y +I G+ G+LE A + + G P Y+ + LL + AY+LFRK++
Sbjct: 481 YTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKME 540
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 187/397 (47%), Gaps = 3/397 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ F+ +P + V + + + ++K + + ++ + M V ++ +L+I
Sbjct: 76 DALASFYRMVRINPRPS--VVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
+++ R V ++ +LG++ G+ DA + N ++ LC + A LFN M K
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
NV++Y VI+G K G V K++ G P+ +T+S +I+ L + ++DA+
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
E M E+G P+ YN+++ + ++G +E + +K M + PN T+T L+ GL
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K V++A VFE M ++G+ P T + ++ C + A +++ + GC
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
+Y +L+ + L EM D Y ++ GLC +G+ + A+ + +E
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKE 433
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G P+ + Y L + L+ A L + +K
Sbjct: 434 MCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMK 470
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 126/259 (48%), Gaps = 3/259 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA ++F + V D+ +YN ++ ++ + V M ++G P + +I
Sbjct: 321 EARLVF--ETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNI 378
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
+++ + ++ ++ +A +L + L D + + ++ LCQ A +LF M
Sbjct: 379 LINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYG 438
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
N++TY I++ G+ K G + E ++LK + + P+ + ++ LIEG+ AG+++ A
Sbjct: 439 PHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAK 498
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
E+F + G PD Y +I + G DE ++ M PN +Y +I G
Sbjct: 499 ELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGF 558
Query: 383 LKSRKVADALEVFEEMLDR 401
L+++ + A+ + +EM+ +
Sbjct: 559 LQNQDSSTAIRLIDEMVGK 577
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 73/169 (43%)
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
D+ + + M N P++ + + + K ++ + + + +M + + ++
Sbjct: 75 DDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNIL 134
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
+ LC ++ + K K+G + L+ L GK ++L++EM + G+
Sbjct: 135 INCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGH 194
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+ Y VI GLC G AV V ++ + G P+ + YS + + L
Sbjct: 195 EPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSL 243
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 188/392 (47%), Gaps = 2/392 (0%)
Query: 149 FFNWAIKHPNV-AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
FFNWA + K YN ++ G+ + FD +++ M V +ET +I++
Sbjct: 136 FFNWATSRDDYDQKSPHPYNEMIDLAGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRR 195
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNV 267
++RAG +A+ R+ED+G D + ++V+ L ++ A S F+S+K + +V
Sbjct: 196 YVRAGLASEAVHCFNRMEDYGCVPDQIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDV 255
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+ Y ++ GW + G++ E E+V K++ G P+ T+S +I+ L R G+I A +VF
Sbjct: 256 IVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFAD 315
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M + GC P+ +N ++ ++ G ++ ++ Y M CEP+ TY LI +
Sbjct: 316 MLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDEN 375
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A++V M+ + + T + + + A MY K + C+ + Y +
Sbjct: 376 LENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNI 435
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL-RK 506
L+R +G M+L + +M + + Y ++ C +G NA + +E + K
Sbjct: 436 LMRMFAGSKSTDMVLKMKKDMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEK 495
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
PS +Y + +L + +L+ L K+
Sbjct: 496 CLTPSLSLYEMVLAQLRRAGQLKKHEELVEKM 527
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 122/248 (49%), Gaps = 2/248 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +V +Y++++ AL R +V +DM G P+ T + +M ++AG+ K +
Sbjct: 286 IEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVL 345
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
Q+ +++ G + D + N ++ C+ ++ A + N+M K K N T+N +
Sbjct: 346 QVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYI 405
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K V R+ +++ P+++T++ L+ + D +++ M +K P+
Sbjct: 406 EKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDKEVEPNV 465
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNC-EPNMDTYTRLISGLLKSRKVADALEVFE 396
N Y +++ + +G ++ K +K M C P++ Y +++ L ++ ++ E+ E
Sbjct: 466 NTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVE 525
Query: 397 EMLDRGIV 404
+M+ +G+V
Sbjct: 526 KMIQKGLV 533
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 183/391 (46%), Gaps = 1/391 (0%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FFNWA + YN ++ G+ K F ++ M V + T S+++ +
Sbjct: 134 FFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRY 193
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM 268
+RAG +A+ R+ED+G D + + V+ LC++ A S F+++K K +V+
Sbjct: 194 VRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHKFEPDVI 253
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
Y ++ GW + G + E E V +E+ G SP+ T+S +I+ L R+G+I A +VF M
Sbjct: 254 VYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEM 313
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ GC P++ +N +I ++ G ++ ++ Y M C ++ TY LI K +
Sbjct: 314 LDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNL 373
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A++V M P+ + + + A M+ + ++VGCK + Y +L
Sbjct: 374 GEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNIL 433
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL-RKG 507
+R + M+ L EM E + Y +IA C +G +A + E + K
Sbjct: 434 MRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKC 493
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
PS +Y + +L + +L+ L K+
Sbjct: 494 IKPSMPLYKMVLEELRKAGQLKKHEELVDKM 524
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 121/251 (48%), Gaps = 2/251 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K ++ +V +Y++++ AL R +V ++M G NP+ T + ++ +RAG+
Sbjct: 278 MKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGR 337
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
K +Q+ +++ D + N ++ C+ ++G A + NSM K N ++N
Sbjct: 338 TEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNP 397
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+ +K V R+ + G P+++T++ L+ D ++ M E+
Sbjct: 398 IFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEE 457
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC-EPNMDTYTRLISGLLKSRKVADA 391
P+ N Y +I+ Y +G ++ +++ M C +P+M Y ++ L K+ ++
Sbjct: 458 VEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKH 517
Query: 392 LEVFEEMLDRG 402
E+ ++M++RG
Sbjct: 518 EELVDKMVERG 528
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 110/237 (46%), Gaps = 1/237 (0%)
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+TFS L+ RAG +A+ F+ M++ GC D A++ VIS E ++
Sbjct: 184 VTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDN 243
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
+ + EP++ YT L+ G ++ +++A VF EM GI P+ T + ++ LC G
Sbjct: 244 LK-HKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQ 302
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A ++ + GC + + L+R G+ +L ++++M+ +D Y +
Sbjct: 303 ITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNF 362
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I C L A+ V+ + P+ ++ + + S + A+ +F ++K
Sbjct: 363 LIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMK 419
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 91/247 (36%), Gaps = 36/247 (14%)
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
EGF ++ +I+ G+ + A + D MK + ++ ++ Y+ G E
Sbjct: 142 EGFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRYVRAGLAAE 201
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+ + M Y C ++ ++ +IS L K R+ +A F+ L P TS +
Sbjct: 202 AVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDN-LKHKFEPDVIVYTSLVH 260
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
C G A +++ EM+ +G
Sbjct: 261 GWCRAGDISEAESVFR-----------------------------------EMKMAGISP 285
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ Y VI LC GQ+ A V E L G P+ + ++ L L + + E ++
Sbjct: 286 NVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVY 345
Query: 536 RKIKIAR 542
++K R
Sbjct: 346 NQMKRLR 352
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 199/412 (48%), Gaps = 4/412 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E +L + LS ++V +V+ R G + FF WA P V S++++V+ LG
Sbjct: 64 LELSLNPFSAQLSTNLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVMSFHILVEILGS 123
Query: 176 RKFFDFMCNVLSDMAKEGVNPDL--ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA 233
K F + + L++M +E + ++ E ++ ++ +A AI+ R+++FG+K
Sbjct: 124 CKQFAILWDFLTEM-RESHHYEINSEIFWLIFRAYSQANLPDGAIRSFNRMDEFGVKPTI 182
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
L+ +L+ LC+R HV A LF+ K + TY+I+ISGW ++G + + + +
Sbjct: 183 HDLDKLLFILCKRKHVKQAQQLFHQAKNRFSLTAKTYSILISGWGEIGDSEKACDLFQAM 242
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+ +G D L ++ L++ L + GR+D+A +F M K PD Y+ I +Y D
Sbjct: 243 LEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDV 302
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
+ M YN PN+ TY +I L K+ V +A ++ +EM+ RG+ P T + +
Sbjct: 303 QSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISRGVKPDTWSYNAI 362
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
C + + A+ + + K C Y ++L+ L G+ + ++W M + +
Sbjct: 363 QAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNMVLKLLIRIGRFDKVTEVWENMVDKKF 422
Query: 474 PSDGEIYEYVIAGLC-NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
Y +I G C G+LE A E + +G P L N+LL
Sbjct: 423 YPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEMLRNRLLG 474
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 185/381 (48%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D +N ++ L + +V ++M G+ PD+ TL+ ++ + RA QV A+
Sbjct: 158 VQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAV 217
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL-FNSMKGKVLFNVMTYNIVISGW 277
ML + G+ D + ++ + + AA + M+ +T N++I+G+
Sbjct: 218 LMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGY 277
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K+G+V + +++ +A+GF PD +T++ + GL + G + A++V D M ++G PD
Sbjct: 278 CKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDV 337
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN VI+ G+ DE M C P+ T+ LI L ++ +AL++ E
Sbjct: 338 FTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARE 397
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ +G+ P T + LC G PH + ++++ + GC Y +L+ L GK
Sbjct: 398 LTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGK 457
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
G LDL +EM+ +G P Y +I LC ++E A V ++ +G S + ++
Sbjct: 458 LGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNT 517
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L + L + +++ A L ++
Sbjct: 518 LIDGLCKAKRIDDATELIEQM 538
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 187/451 (41%), Gaps = 71/451 (15%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV + N ++KAL R +L +M+ GV PD T + +M FI G + A+
Sbjct: 193 IQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAAL 252
Query: 219 QM-------------------------LGRLEDF----------GLKFDAESLNVVLWCL 243
++ +GR+ED G + D + N + L
Sbjct: 253 RVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGL 312
Query: 244 CQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
CQ HV A + + M + +V TYN VI+ SK G++ E + ++ ++V G PD+
Sbjct: 313 CQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDT 372
Query: 303 LTFSFLIEGLGRAGRIDDA-----------------------------------IEVFDT 327
TF+ LI L R+++A I +F+
Sbjct: 373 TTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEE 432
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
MK GC PD YN +I + S+G + M S C + TY +I L K +
Sbjct: 433 MKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMR 492
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A EVF++M +GI S T + ++ LC A + ++ K G + + Y
Sbjct: 493 IEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNS 552
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
+L G D+ M +G+ D Y +I GLC G+ + A+ ++ KG
Sbjct: 553 ILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 612
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ Y+ + L N L A NLFR++
Sbjct: 613 IRPTPKAYNPVIQSLFRRNNLRDALNLFREM 643
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 168/332 (50%), Gaps = 2/332 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D ++N ++ AL + + ++ ++ +G++PD+ T +I++++ + G + I++
Sbjct: 371 DTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLF 430
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++ G D + N+++ LC +G A L N M+ + +TYN +I K
Sbjct: 431 EEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKK 490
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
++ E E V ++ A+G S ++TF+ LI+GL +A RIDDA E+ + M ++G P+ Y
Sbjct: 491 MRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITY 550
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N+++++Y G+ + + M++ E ++ TY LI+GL K+ + AL++ M
Sbjct: 551 NSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRI 610
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS-GFGKCG 459
+GI P+ ++ L A+ ++++ +VG YK++ R L G G
Sbjct: 611 KGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIK 670
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
D EM G+ + + + GL N+G
Sbjct: 671 EAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLG 702
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 166/397 (41%), Gaps = 66/397 (16%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA + N A+ + A Y IV+ LG FD M ++ +M +EG + ++
Sbjct: 70 EAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREG----HQVRAV 125
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
V+ SF+ + RL +FD +++++VL L + F V
Sbjct: 126 VVRSFVES---------YARLR----RFD-DAVDLVLNQL--------DNDTFGVQADTV 163
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+FN + N+++ G SKL +E V E+ G PD +T + LI+ L RA ++ A+
Sbjct: 164 VFNHL-LNVLVEG-SKLKL---LESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVL 218
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+ + M G PD + ++ +I G + ++ M C P T LI+G
Sbjct: 219 MLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYC 278
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
K +V DAL ++ + G P T +F+ LC G A+
Sbjct: 279 KMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALK--------------- 323
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
++DL M + G+ D Y VI L G+L+ A ++ +
Sbjct: 324 -----------------VMDL---MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM 363
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+ +G P ++ L L + N+LE A +L R++ +
Sbjct: 364 VDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTV 400
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 198/420 (47%), Gaps = 42/420 (10%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V +V S NV++ L R DF +V+ M K G+ PD T + +++ G++ +A+
Sbjct: 127 VTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAV 186
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM---KGK---VLFN------ 266
+ + G + + S N V+ LC+ + A +F M +GK V +N
Sbjct: 187 GLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSL 246
Query: 267 ------------------------VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
V+TYN ++ G+ LGQ+ E R+ KE+V PD+
Sbjct: 247 CKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDT 306
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+TF+ L++GL + G + +A V +TM EKG P+ YNA++ Y DE +K
Sbjct: 307 VTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGI 366
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M C PN+ +Y LI+G KS+++ +A + EM ++ + P T T ++ ++ LC G
Sbjct: 367 MIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGR 426
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEI 479
P A+ ++K+ G L AY +L L GF K G L L L EM E + +
Sbjct: 427 PREALNLFKEMCSSGLLPDLMAYSIL---LDGFCKHGHLDEALKLLKEMHERRIKPNIIL 483
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y +I G+ G+LE A + + G P Y+ + LL + AY FRK++
Sbjct: 484 YTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKME 543
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 194/411 (47%), Gaps = 8/411 (1%)
Query: 131 VVGKVVNRGNLSGEAMVLF--FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSD 188
++ + N G + EA+ LF W+ PNV SYN ++ L + V
Sbjct: 172 LINGLCNEGKIK-EAVGLFNEMVWSGHEPNVI----SYNTVINGLCKNGNTIMAVRVFRK 226
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + P++ T + ++DS + V +A++ L + D G+ D + N +L C
Sbjct: 227 MEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQ 286
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ A+ LF M G+ V+ + +T+NI++ G K G V E V + + +G P++ T++
Sbjct: 287 LNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNA 346
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
L++G ++D+AI+V M KGC P+ ++YN +I+ Y +E + MS N
Sbjct: 347 LMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKN 406
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
P+ TY+ L+ GL + + +AL +F+EM G++P + L+ C +G A+
Sbjct: 407 LTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEAL 466
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+ K+ + K ++ Y +L+R + GK + +L+ ++ G D Y +I GL
Sbjct: 467 KLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGL 526
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G + A + GF P Y+ + L + +A L ++
Sbjct: 527 LKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEM 577
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 190/401 (47%), Gaps = 5/401 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ F+ +P + V + + ++ ++K + ++ + M GV ++ +L++
Sbjct: 79 DALTSFYRMVRMNPRPS--VVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KG 261
+++ R V A+ ++G++ G++ DA + N ++ LC + A LFN M G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
NV++YN VI+G K G + RV +++ P+ +T++ +I+ L + +++A
Sbjct: 197 HEP-NVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+E M ++G PD YN ++ + S+G +E + +K M N P+ T+ L+ G
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDG 315
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L K V++A V E M ++G P+ T + ++ C + A+ + GC +
Sbjct: 316 LCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPN 375
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
L++Y +L+ + L EM E D Y ++ GLC +G+ A+ + +
Sbjct: 376 LSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFK 435
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
E G P + YS L + L+ A L +++ R
Sbjct: 436 EMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERR 476
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 153/327 (46%), Gaps = 1/327 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV +YN I+ + + +M V PD T +I++D + G V +A
Sbjct: 267 IPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEAR 326
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+ + + G + +A + N ++ C + A + M GK N+ +YNI+I+G+
Sbjct: 327 CVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGY 386
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K ++ E +R+L E+ + +PD++T+S L++GL + GR +A+ +F M G PD
Sbjct: 387 CKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDL 446
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
AY+ ++ + G DE +K K M +PN+ YT LI G+ + K+ A E+F +
Sbjct: 447 MAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSK 506
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ GI P T ++ L G A ++K G +Y ++++
Sbjct: 507 LSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQD 566
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVI 484
+ L EM + +D ++ ++
Sbjct: 567 SSTAIQLIDEMVGKRFSADSSTFQMLL 593
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 128/252 (50%), Gaps = 1/252 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ D VL M +G P+L + +I+++ + ++ ++ +A ++L +
Sbjct: 343 TYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEM 402
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ L D + + ++ LCQ A +LF M +L ++M Y+I++ G+ K G +
Sbjct: 403 SEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHL 462
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E ++LKE+ P+ + ++ LI G+ AG+++ A E+F + G PD YN +
Sbjct: 463 DEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVM 522
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I + G DE ++++ M P+ +Y +I G L+++ + A+++ +EM+ +
Sbjct: 523 IKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRF 582
Query: 404 VPSTGTITSFLE 415
+ T L+
Sbjct: 583 SADSSTFQMLLD 594
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 87/196 (44%), Gaps = 8/196 (4%)
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
++ +K CG +N SN IS+ D+ + + M N P++ + + + + K +
Sbjct: 59 SLPQKHCGFGSNT-----SNDISI---DDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKK 110
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+ + A+ + +M G+ + ++ + LC A+ + K K+G + +
Sbjct: 111 QYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFN 170
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+ L GK + L++EM SG+ + Y VI GLC G AV V + +
Sbjct: 171 TLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQN 230
Query: 507 GFCPSRLVYSKLSNKL 522
P+ + Y+ + + L
Sbjct: 231 RGKPNVVTYNTIIDSL 246
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 66/155 (42%)
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ DAL F M+ PS FL + +A+ + + G ++ + +
Sbjct: 77 IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L+ L + + +M + G D + +I GLCN G+++ AV + E + G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
P+ + Y+ + N L + A +FRK++ R
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNR 231
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 187/381 (49%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V + + YN ++ L + + ++M+ +G+ PD+ T + V+D+ RA Q A+
Sbjct: 157 VQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAV 216
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
ML + + D + ++ + + AA L M + +T N++I+G+
Sbjct: 217 LMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGY 276
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
KLG+V + +++ +A+GF PD +TFS + GL + G +D A++V M ++GC PD
Sbjct: 277 CKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDV 336
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y+ VI+ + G+ +E M C P+ T+ LI L ++ +AL++ E
Sbjct: 337 YTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARE 396
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ +G+ P+ T + LC G PH A+ ++++ + GC Y +L+ L GK
Sbjct: 397 LTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGK 456
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
LDL EM+ SG P Y +I GLC ++E A V ++ G + + ++
Sbjct: 457 LAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNT 516
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L + L + +++ A L ++
Sbjct: 517 LIDGLCNAERIDDAAELVDQM 537
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 157/348 (45%), Gaps = 1/348 (0%)
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
+G PD T S ++ + G V A+++LG + G + D + + V+ CLC +
Sbjct: 295 DGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEE 354
Query: 252 ASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A + N M L + T+N +I Q+ E + +E+ +G SP+ TF+ LI
Sbjct: 355 AKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILIN 414
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
L + G A+ +F+ MK GC PD YN +I N S G + + K M C
Sbjct: 415 ALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQ 474
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
+ TY +I GL K R++ +A EVF++M GI + T + ++ LC+ A +
Sbjct: 475 STVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELV 534
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
+ G + + Y +L G D+ M +G+ D Y +I GLC
Sbjct: 535 DQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKA 594
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ + A+ ++ KG P+ Y+ + L N A +LFR++
Sbjct: 595 RRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREM 642
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 180/381 (47%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV ++N ++ AL R + +L +M+ V PD T + +M+ F+ G + A+
Sbjct: 192 IEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAAL 251
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA-SSLFNSMKGKVLFNVMTYNIVISGW 277
++ R+ + G + ++NV++ C+ VG A + + + +T++ ++G
Sbjct: 252 RLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGL 311
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G V +VL ++ EG PD T+S +I L G +++A + + M + GC PDT
Sbjct: 312 CQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDT 371
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+N +I + +E + + ++ PN+ T+ LI+ L K A+ +FEE
Sbjct: 372 TTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEE 431
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M G P T ++ LCS G A+ + K+ GC S Y ++ L +
Sbjct: 432 MKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRR 491
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+++ +M +G + + +I GLCN ++++A ++++ + +G P+ + Y+
Sbjct: 492 IEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNS 551
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ + A ++ + +
Sbjct: 552 ILTHYCKQGNISKAADILQTM 572
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 186/403 (46%), Gaps = 7/403 (1%)
Query: 144 EAMVLFFNWAIKHPN---VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
EA + N A+ + ++DV Y I++ LG FD M ++ +M +EG L
Sbjct: 70 EAALRMLNSALARDDGLTPSRDV--YEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGL 127
Query: 201 LSIVMDSFIRAGQVYKAIQMLG-RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
+ + S+ R A ++ +L+ FG++ + E N +L L + + S + M
Sbjct: 128 VQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEM 187
Query: 260 KGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+ + +V+T+N VI + Q +L+E+ + +PD TF+ L+EG G I
Sbjct: 188 SSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSI 247
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
+ A+ + M E GC P + N +I+ Y +G + + Y + + EP+ T++
Sbjct: 248 EAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTF 307
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
++GL ++ V AL+V ML G P T ++ + LC+ G A + + GC
Sbjct: 308 VNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGC 367
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
T + L+ L + LDL E+ G + + +I LC +G AV
Sbjct: 368 LPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVR 427
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
+ EE G P + Y+ L + L +S KL A +L ++++++
Sbjct: 428 LFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVS 470
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 166/332 (50%), Gaps = 2/332 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D ++N ++ AL + ++ ++ +G++P++ T +I++++ + G + A+++
Sbjct: 370 DTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLF 429
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
++ G D + N+++ LC + A L M+ + +TYN +I G K
Sbjct: 430 EEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKR 489
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
++ E E V ++ G +++TF+ LI+GL A RIDDA E+ D M +G P+ Y
Sbjct: 490 RRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTY 549
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N+++++Y G+ + + M++ E ++ TY LI+GL K+R+ AL++ M
Sbjct: 550 NSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRM 609
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS-GFGKCG 459
+G+ P+ ++ L A+ ++++ +VG YK++ R L G G
Sbjct: 610 KGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIK 669
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
D EM ++G+ + + + GL N+G
Sbjct: 670 EAFDFLVEMADNGFIPEFSSFRMLAEGLLNLG 701
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 169/399 (42%), Gaps = 37/399 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +++ V L + D VL M +EG PD+ T S V++ G++ +A ++
Sbjct: 300 DRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIV 359
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
++ D G D + N ++ LC + A L + K L NV T+NI+I+ K+
Sbjct: 360 NQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKV 419
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G R+ +E+ + G +PD +T++ LI+ L +G++ A+++ M+ GC T Y
Sbjct: 420 GDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTY 479
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I +E + + M N T+ LI GL + ++ DA E+ ++M+
Sbjct: 480 NTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMIS 539
Query: 401 RGIVPSTGTITSFLEPLCSYGP-----------------------------------PHA 425
G+ P+ T S L C G A
Sbjct: 540 EGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQA 599
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ + + R G K + AY +++ L L L+ EM E G P D Y+ V
Sbjct: 600 ALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFR 659
Query: 486 GLC-NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
GLC G ++ A + E GF P + L+ LL
Sbjct: 660 GLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLL 698
>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 638
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 230/493 (46%), Gaps = 12/493 (2%)
Query: 23 LFSFSTSVRSNLSYNE--LLSNQKKNMSSLDEH--HVLKELSDLFQISSHNSFPNVYKES 78
+ FS V LS + LLS+Q K+ L HV + L D F+ S N V E
Sbjct: 7 MHRFSPIVEFYLSKRQFFLLSSQFKSRFDLIHRSFHVSRALEDNFRRS--NGIGLVCLEK 64
Query: 79 RSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNR 138
N R +S+ DEF E+ + + +E AL V+L ++ +V+NR
Sbjct: 65 NHNHNDRTKNSK-YDEFASDVEKAYRILRKFHSRVPKLELALNESGVELRPGLIERVLNR 123
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
+G FF WA K P ++ Y +VK L + + F + ++ +M KE NP L
Sbjct: 124 CGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKE--NPQL 181
Query: 199 ---ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
E +++ F A V KAI++L + FGL+ D +L LC+ V A+ L
Sbjct: 182 IEPELFVVLVQRFASADMVKKAIEVLDEMPTFGLEPDEYVFGCLLDALCKHGSVKDAAKL 241
Query: 256 FNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
F M+ + N+ + ++ GW + +++E + VL ++ GF PD + ++ L+ G A
Sbjct: 242 FEDMRLRFPVNLRYFTSLLYGWCREEKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGYANA 301
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
G++ DA ++ M+ +G P+ Y +I V +E MK + M Y CE ++ TY
Sbjct: 302 GKMADAYDLLKDMRRRGFEPNATCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTY 361
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
T L+SG K K+ V ++M+ +G++PS T + + + +K ++
Sbjct: 362 TALVSGFCKWGKIDKCYLVLDDMIKKGLMPSQLTYMHIMAAHEKKEKLIECLELMEKMKQ 421
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
+ + Y +++R G+ + LW+EM+ +G + + +I GL + G L
Sbjct: 422 IEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEGNGLSPGADTFVIIINGLTSQGCLLE 481
Query: 496 AVLVMEESLRKGF 508
A +E + +G
Sbjct: 482 ACDHFKEMVARGL 494
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 1/235 (0%)
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
F L++ A + AIEV D M G PD + ++ G + K ++ M
Sbjct: 187 FVVLVQRFASADMVKKAIEVLDEMPTFGLEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR 246
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
N+ +T L+ G + K+ +A V +M + G P T+ L + G
Sbjct: 247 -LRFPVNLRYFTSLLYGWCREEKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKMA 305
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A + K R+ G + + T Y +L++ L + + ++ EM+ +D Y ++
Sbjct: 306 DAYDLLKDMRRRGFEPNATCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALV 365
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+G C G+++ LV+++ ++KG PS+L Y + KL L K+K
Sbjct: 366 SGFCKWGKIDKCYLVLDDMIKKGLMPSQLTYMHIMAAHEKKEKLIECLELMEKMK 420
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 151/383 (39%), Gaps = 51/383 (13%)
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWC------------LCQRLHVGAASSLF 256
+R G + + + G + G +F + +C L + GA L
Sbjct: 112 LRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLI 171
Query: 257 NSMKGK--VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
M+ + L + +++ ++ V + VL E+ G PD F L++ L +
Sbjct: 172 EEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPTFGLEPDEYVFGCLLDALCK 231
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G + DA ++F+ M+ + + + +++ + E M EP++
Sbjct: 232 HGSVKDAAKLFEDMRLRF-PVNLRYFTSLLYGWCREEKMMEAKYVLVQMKEAGFEPDIVD 290
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
YT L+SG + K+ADA ++ ++M RG P+ T ++ LC AM ++ +
Sbjct: 291 YTNLLSGYANAGKMADAYDLLKDMRRRGFEPNATCYTVLIQALCKVDRMEEAMKVFVEME 350
Query: 435 KVGCKLSLTAYKLLLRRLSGFG---KCGMLLD---------------------------- 463
+ C+ + Y L+ +G KC ++LD
Sbjct: 351 RYECEADVVTYTALVSGFCKWGKIDKCYLVLDDMIKKGLMPSQLTYMHIMAAHEKKEKLI 410
Query: 464 ----LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
L +M++ Y D IY VI C +G+++ AV + E G P + +
Sbjct: 411 ECLELMEKMKQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEGNGLSPGADTFVIII 470
Query: 520 NKLLASNKLESAYNLFRKIKIAR 542
N L + L A + F+++ +AR
Sbjct: 471 NGLTSQGCLLEACDHFKEM-VAR 492
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/341 (18%), Positives = 130/341 (38%), Gaps = 75/341 (21%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
VL M + G PD+ + ++ + AG++ A +L + G + +A V++ LC
Sbjct: 275 VLVQMKEAGFEPDIVDYTNLLSGYANAGKMADAYDLLKDMRRRGFEPNATCYTVLIQALC 334
Query: 245 QRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ + A +F M + + +V+TY ++SG+ K G++ + VL +++ +G P L
Sbjct: 335 KVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYLVLDDMIKKGLMPSQL 394
Query: 304 TFSF----------LIEGLG-------------------------RAGRIDDAIEVFDTM 328
T+ LIE L + G + +A+ +++ M
Sbjct: 395 TYMHIMAAHEKKEKLIECLELMEKMKQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEM 454
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM------------------------- 363
+ G P + + +I+ S G E ++K M
Sbjct: 455 EGNGLSPGADTFVIIINGLTSQGCLLEACDHFKEMVARGLFSVPQYGTLKLLLNTLLKDK 514
Query: 364 -------------SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
S +CE ++ ++T I L +A EM++ +P T
Sbjct: 515 KLEMAKDVWSCITSKGSCELSVSSWTIWIHALFSKGYEKEACSYCLEMIELEFMPQPDTF 574
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
++ L A+ + +K R + + ++ +K+ RR
Sbjct: 575 AKLMKGLKKLYHREFAVEITEKVRNMAAEKEMS-FKMYKRR 614
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 189/402 (47%), Gaps = 2/402 (0%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
R + + FFNWA + Y ++ G+ + FD ++ M V
Sbjct: 121 RHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIP 180
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ET +I++ +++AG +A+ R+ED+G K D + +VV+ L ++ A S F+
Sbjct: 181 VETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFD 240
Query: 258 SMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
S+K + +V+ Y ++ GW + G + E ERV E+ G P+ T+S +I+ L R+G+
Sbjct: 241 SLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQ 300
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
I A +VF M + GC P+ +N ++ ++ G ++ ++ Y M C P+ TY
Sbjct: 301 ITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNF 360
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
LI + + +A+++ + +G + + + G ++A M+ K + +
Sbjct: 361 LIESHCRDDNLEEAVKILNS-VKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLK 419
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
C+ + Y +L+R + M+L L EM E+ + Y +I+ C IG NA
Sbjct: 420 CRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAY 479
Query: 498 LVMEESL-RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+E + K PS VY + +L + +L+ L K+
Sbjct: 480 SFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKM 521
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 131/267 (49%), Gaps = 4/267 (1%)
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
GN+S EA +F +K + +V +Y++++ AL R +V S+M G +P+
Sbjct: 264 GNIS-EAERVF--GEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNA 320
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
T + +M ++AG+ K +Q+ +++ G DA + N ++ C+ ++ A + NS
Sbjct: 321 ITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS 380
Query: 259 MKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+K N ++N + SKLG V R+ ++ P+++T++ L+
Sbjct: 381 VKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKST 440
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC-EPNMDTYTR 377
D +++ M E P+ N Y +IS + +G ++ ++K M C P++ Y
Sbjct: 441 DMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEM 500
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIV 404
++ L K+ ++ E+ E+M++RG V
Sbjct: 501 VLQQLRKAGQLKKHEELVEKMVNRGFV 527
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 96/243 (39%), Gaps = 38/243 (15%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
G SP+ + +I+ G+ + D A ++ D MK + + ++ Y+ G E
Sbjct: 143 GHSPEP--YMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEA 200
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
+ + M Y C+P+ ++ +IS L K R+ +A F+ + DR P TS +
Sbjct: 201 VHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVYTSLVHG 259
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
C G +A +V FG EM+ +G +
Sbjct: 260 WCRAG-------NISEAERV------------------FG----------EMKMAGIQPN 284
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
Y VI LC GQ+ A V E + G P+ + ++ L + + + E ++
Sbjct: 285 VYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYN 344
Query: 537 KIK 539
++K
Sbjct: 345 QMK 347
>gi|224068054|ref|XP_002302657.1| predicted protein [Populus trichocarpa]
gi|222844383|gb|EEE81930.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 212/455 (46%), Gaps = 3/455 (0%)
Query: 87 DSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAM 146
+ VDEF E++ + + +E AL V L + +V+NR +G
Sbjct: 39 EQDNKVDEFASDVEKVYRLLRKFHSRVPKLELALQESGVVLRNGLTERVLNRCGDAGILA 98
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKE-GVNPDLETLSIVM 205
FF WA K P ++Y ++K L + K F + +L +M ++ V E +VM
Sbjct: 99 YKFFVWASKQPCYRHCYENYKAMIKVLSKMKQFGAVWALLEEMRRDNSVLITSEVFVVVM 158
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF 265
F + V KAI++L + +G + D +L LC+ V A+SLF M+ +
Sbjct: 159 RRFASSRMVNKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFSP 218
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
++ + ++ GW K G+++E + VL ++ GF PD + ++ L+ G AG++ DA ++
Sbjct: 219 SLKHFTCLLYGWCKEGKLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKMGDAFDLL 278
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
++ KGC P+ +Y +I DE M+ + M C+ ++ TYT L+SG K
Sbjct: 279 KEIRRKGCDPNATSYTILIQALCGQEKMDEAMRVFVEMERSGCDADVVTYTALVSGFCKW 338
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
R + ++ + M+ +G +P+ T + + + +K+GC L+ Y
Sbjct: 339 RMIDKGYQILQSMIQKGHMPNQLTYLHLMLAHEKKEELEECKELMGEMQKIGCIPDLSIY 398
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+++R G+ +D W+EM+ SG + + +I G G L A +E +
Sbjct: 399 NVVIRLACKLGEVNAGVDAWNEMEVSGLSPGLDTFVIMINGFLGHGYLVEACQYFKEMVE 458
Query: 506 KGFCPSRL--VYSKLSNKLLASNKLESAYNLFRKI 538
+G SR + L N LL KLE A +L+ I
Sbjct: 459 RGLLSSRQYGILKDLLNALLRGEKLELAKDLWSCI 493
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 128/302 (42%), Gaps = 6/302 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
I+ + SY ++++AL ++ D V +M + G + D+ T + ++ F +
Sbjct: 281 IRRKGCDPNATSYTILIQALCGQEKMDEAMRVFVEMERSGCDADVVTYTALVSGFCKWRM 340
Query: 214 VYKAIQMLGRLEDFG-LKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNI 272
+ K Q+L + G + L+++L + + K + ++ YN+
Sbjct: 341 IDKGYQILQSMIQKGHMPNQLTYLHLMLAHEKKEELEECKELMGEMQKIGCIPDLSIYNV 400
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
VI KLG+V E+ G SP TF +I G G + +A + F M E+G
Sbjct: 401 VIRLACKLGEVNAGVDAWNEMEVSGLSPGLDTFVIMINGFLGHGYLVEACQYFKEMVERG 460
Query: 333 CGPDTNAYNAV--ISNYISVGDFDECMK-YYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
+ Y + + N + G+ E K + + + CE N+D++T I L + V
Sbjct: 461 L-LSSRQYGILKDLLNALLRGEKLELAKDLWSCIVTKGCELNVDSWTIWIHALFSNGHVK 519
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
+A +M+D ++P T + L A + +K RK+ +T +K+
Sbjct: 520 EACSYCLDMMDADLMPKPETFAKLMRGLRKLYNRQFAAEITEKVRKMAADRHVT-FKMYK 578
Query: 450 RR 451
RR
Sbjct: 579 RR 580
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 2/168 (1%)
Query: 373 DTYTRLISGLLKSRKVADALEVFEEML-DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+ Y +I L K ++ + EEM D ++ ++ + S + A+ +
Sbjct: 116 ENYKAMIKVLSKMKQFGAVWALLEEMRRDNSVLITSEVFVVVMRRFASSRMVNKAIEVLD 175
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ K GC+ + LL L G L+ +M+ PS + ++ G C G
Sbjct: 176 EMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFSPSLKH-FTCLLYGWCKEG 234
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+L A V+ + GF P +VY+ L + + K+ A++L ++I+
Sbjct: 235 KLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKMGDAFDLLKEIR 282
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 204/412 (49%), Gaps = 2/412 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
++ AL V +S D+V V+ R +G FF WA K + +++Y++++++L +
Sbjct: 31 LDTALNQTGVRVSPDLVENVLKRFENAGMPAFRFFEWAEKQRGYSHSIRAYHLMIESLAK 90
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ + + +++S M K+G+ ++ET I+M + RA +V +A+ ++ + + + +
Sbjct: 91 IRQYQIVWDLVSAMRKKGM-LNVETFCIMMRKYARANKVDEAVYTFNVMDKYDVVPNLAA 149
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
N +L LC+ +V A +F++MKG+ + + +Y+I++ GW K + V +E+V
Sbjct: 150 FNGLLSALCKSNNVRKAQEIFDAMKGQFVPDEKSYSILLEGWGKAPNLPRAREVFREMVE 209
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
G PD +T+ +++ L +AGR+D+A+EV M C P + Y+ ++ Y ++
Sbjct: 210 AGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIED 269
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+ + M+ + ++ Y LI K K + V +EM G+ P++ T +
Sbjct: 270 AIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIIS 329
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
+ G A ++ + K+ C+ Y ++++ + M L +W M+ +
Sbjct: 330 SMIGQGQTDRAFRVFCRMIKL-CEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVP 388
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
+ +I GLC A +VMEE + KG PSR+ + +L L+ +
Sbjct: 389 SMHTFSALIKGLCEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGR 440
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 216/443 (48%), Gaps = 22/443 (4%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L+++K G DA + ++ + N G+L G AM + PNV +
Sbjct: 134 LLEEMKSAGFAPDAFTHT------PIITAMANAGDLDG-AMDHLRSMGC-DPNVV----T 181
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y ++ A R K + +L +M + G P+L T ++++D+ + V A ++ ++
Sbjct: 182 YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 241
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVV 284
+ G + + N ++ C+R +V A L M K + NV+TY+ +I G K + +
Sbjct: 242 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 301
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E + VL+E+ G +PD+ T+S LI GL +A +I++A ++ M GC PD Y+++I
Sbjct: 302 EAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 361
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG-I 403
+ G E K + M P++ TY +I GL K K+A+A + E+M + G +
Sbjct: 362 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDV 421
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+P T ++ + LC A + + K GC + Y ++ G KCG L +
Sbjct: 422 LPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTII---DGLCKCGRLEE 478
Query: 464 ---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV-YSKLS 519
L M+ +G + Y +I+GLC +++ A VMEE +R CP LV Y+ +
Sbjct: 479 AEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEE-MRNAGCPPNLVTYNTMV 537
Query: 520 NKLLASNKLESAYNLFRKIKIAR 542
N L S +++ A L +++K R
Sbjct: 538 NGLCVSGRIKEAQQLVQRMKDGR 560
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 196/414 (47%), Gaps = 13/414 (3%)
Query: 131 VVGKVVNRGNLSGEAMVL-FFNWAIKH-PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSD 188
+VG+VVN +L + L FF WA P + S+N +++ L R K ++
Sbjct: 45 IVGRVVN--SLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRS 102
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
PD+ + +IV+ F AG ++ A+++L ++ G DA + ++ +
Sbjct: 103 ELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGD 162
Query: 249 VGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
+ A SM NV+TY +I+ +++ ++ E ++L+E+ G P+ +T++ L
Sbjct: 163 LDGAMDHLRSMGCDP--NVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVL 220
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
++ L + + A +V M E G P+ +N+++ + G+ D+ K M +
Sbjct: 221 VDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGM 280
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
PN+ TY+ LI GL KS+K +A EV EEM RG+ P T ++ + LC A
Sbjct: 281 RPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQ 340
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIA 485
M ++ GC + Y ++ F K G LL+ EM++ D Y VI
Sbjct: 341 MLRRMAGSGCTPDVVVYSSIIH---AFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVID 397
Query: 486 GLCNIGQLENAVLVMEESLRKG-FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GLC +G++ A +++E+ G P + YS + N L S+ L A L ++
Sbjct: 398 GLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRM 451
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 179/381 (46%), Gaps = 28/381 (7%)
Query: 96 LLPEERLRGVFLQKLKGKGVIEDALWNVN-VDLSLDVVGKVVNRGNLSGEAMVLFFNWAI 154
LL E R RG L V+ DAL ++ V + DVV K++ G V+ FN +
Sbjct: 201 LLEEMRERGCP-PNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN---VMTFNSLV 256
Query: 155 ----KHPNV-----------AK----DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
K NV AK +V +Y+ ++ L + + F VL +M GV
Sbjct: 257 DGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVT 316
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
PD T S ++ +A ++ +A QML R+ G D + ++ C+ + A
Sbjct: 317 PDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKT 376
Query: 256 FNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG-FSPDSLTFSFLIEGLG 313
M K + +V+TYN VI G KLG++ E + +L+++ G PD +T+S +I GL
Sbjct: 377 LQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLC 436
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
++ + +A ++ D M + GC PD Y +I G +E +GM C PN+
Sbjct: 437 KSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVV 496
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
TYT LISGL K+RKV +A V EEM + G P+ T + + LC G A + ++
Sbjct: 497 TYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM 556
Query: 434 R--KVGCKLSLTAYKLLLRRL 452
+ + C Y+ ++ L
Sbjct: 557 KDGRAECSPDAATYRTIVNAL 577
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 132/279 (47%), Gaps = 3/279 (1%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V +YNIVISG+ G + +L+E+ + GF+PD+ T + +I + AG +D A+
Sbjct: 111 DVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM--- 167
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D ++ GC P+ Y A+I+ + +E MK + M C PN+ TY L+ L K
Sbjct: 168 DHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKL 227
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
V A +V ++M++ G P+ T S ++ C G A + G + ++ Y
Sbjct: 228 SMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTY 287
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ L K ++ EM+ G D Y +I GLC ++E A ++
Sbjct: 288 SALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAG 347
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
G P +VYS + + S KL A ++++ R++
Sbjct: 348 SGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKS 386
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 189/395 (47%), Gaps = 2/395 (0%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FFNW+ + YN ++ G+ + FD +V+ M GV + T S ++ +
Sbjct: 164 FFNWSSSLDGFPASPEPYNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRY 223
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM 268
+RAG +A+ R+ED+G D + ++V+ LC++ A S F+S+K + +V+
Sbjct: 224 VRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHRFEPDVV 283
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
Y ++ GW + G + + E V ++ G P+ T+S +I+ L R G+I A +VF M
Sbjct: 284 VYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEM 343
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ GC P+ +N+++ ++ G ++ +K Y M C + +Y +I + +
Sbjct: 344 IDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENL 403
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A ++ M+ +G+ P+ T + + A MY + +++ C+ + Y +L
Sbjct: 404 EEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNIL 463
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV-LVMEESLRKG 507
+R + M+L + EM ES + Y +I+ C++ NA L+ME K
Sbjct: 464 MRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKC 523
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
P+ VY + L + +L+ L K+ +AR
Sbjct: 524 LRPNLSVYETVLELLRKAGQLKKHEELVDKM-VAR 557
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 129/298 (43%), Gaps = 49/298 (16%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FF+ ++KH DV Y +V R V SDM G+ P++ T SIV+DS
Sbjct: 270 FFD-SLKH-RFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSL 327
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS-----LFNSMKG-K 262
R GQ+ +A + + D G +A + N ++ R+HV A + ++N MK
Sbjct: 328 CRCGQITRAHDVFSEMIDAGCDPNAVTFNSLM-----RVHVKAGRTEKVLKVYNQMKRLG 382
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ ++YN +I + + E ++L +V +G +P++ TF+F+ + + ++ A
Sbjct: 383 CPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAH 442
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY------- 375
++ MKE C P+T YN ++ + D +K K M EPN++TY
Sbjct: 443 RMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMF 502
Query: 376 -----------------------------TRLISGLLKSRKVADALEVFEEMLDRGIV 404
++ L K+ ++ E+ ++M+ RG V
Sbjct: 503 CDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLRKAGQLKKHEELVDKMVARGFV 560
>gi|15228788|ref|NP_191813.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214682|sp|Q3EAF8.1|PP294_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62540, mitochondrial; Flags: Precursor
gi|332646841|gb|AEE80362.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 202/404 (50%), Gaps = 1/404 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L + +DLS D++ +V+ R + + FF WA + A ++YN ++ L +
Sbjct: 148 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAK 207
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ F+ M +VL +M +G+ +ET +I M +F A + KA+ + ++ + K E+
Sbjct: 208 TRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVET 266
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
+N +L L + A LF+ +K + N+MTY ++++GW ++ ++E R+ +++
Sbjct: 267 INCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 326
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
G PD + + ++EGL R+ + DAI++F MK KG P+ +Y +I ++ +
Sbjct: 327 HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 386
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
++Y+ M +P+ YT LI+G +K+ E+ +EM ++G P T + ++
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
+ + P +Y K + + S+ + ++++ M +W EM + G
Sbjct: 447 LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP 506
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
D Y +I GL + G+ A +EE L KG + Y+K +
Sbjct: 507 DDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFA 550
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 143/319 (44%), Gaps = 2/319 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V++ N ++ +LGR K VL D KE P++ T +++++ + R + +A ++
Sbjct: 264 VETINCLLDSLGRAKLGK-EAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 322
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+ D GLK D + NV+L L + + A LF+ MK K NV +Y I+I + K
Sbjct: 323 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 382
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ ++V G PD+ ++ LI G G ++D E+ M+EKG PD YN
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A+I + + + Y M EP++ T+ ++ +R V++EM+ +
Sbjct: 443 ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK 502
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
GI P + T + L S G A ++ G K L Y G+ +
Sbjct: 503 GICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIF 562
Query: 462 LDLWHEMQESGYPSDGEIY 480
+L + SG + EI+
Sbjct: 563 EELAQRAKFSGKFAAAEIF 581
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 118/271 (43%), Gaps = 4/271 (1%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TYN ++S +K Q M VL+E+ +G TF+ ++ A A+ +F+ M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELM 255
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
K+ N ++ + E + + PNM TYT L++G + R +
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRVRNL 314
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A ++ +M+D G+ P LE L A+ ++ + G ++ +Y ++
Sbjct: 315 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIM 374
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+R ++ + +M +SG D +Y +I G +L+ +++E KG
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
Query: 509 CPSRLVYSKLSNKLLASNKL-ESAYNLFRKI 538
P Y+ L KL+A+ K+ E ++ K+
Sbjct: 435 PPDGKTYNALI-KLMANQKMPEHGTRIYNKM 464
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 191/400 (47%), Gaps = 9/400 (2%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ L N + D YN ++ L + +V S+M G+ PD+ T +
Sbjct: 35 DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 94
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
+M + RA QV A+ ML + G+ D + ++ + + AA + K ++
Sbjct: 95 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV----KARM 150
Query: 264 L-----FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
L +T N++I+G+ KLG+V + +++ +A+GF PD +T++ + GL + +
Sbjct: 151 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 210
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
A++V D M ++G PD YN V++ G +E M C P++ T+ L
Sbjct: 211 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 270
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I+ L ++ +AL++ ++ +G+ P T + LC G PH A+ ++++ + GC
Sbjct: 271 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 330
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
Y L+ L GK G LDL +M+ +G P Y +I GLC ++E A
Sbjct: 331 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 390
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
V ++ +G + + ++ L + L K++ A+ L ++
Sbjct: 391 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQM 430
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 189/451 (41%), Gaps = 71/451 (15%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV ++N ++KAL R +L +M+ GV PD T + +M F+ G + A+
Sbjct: 85 IKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAAL 144
Query: 219 QM-------------------------LGRLEDF----------GLKFDAESLNVVLWCL 243
++ LGR+ED G + D + N + L
Sbjct: 145 RVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL 204
Query: 244 CQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVL------------ 290
CQ HVG A + + M + +V TYNIV++ K GQ+ E + +L
Sbjct: 205 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDI 264
Query: 291 -----------------------KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+++ +G SPD TF+ LI L + G A+ +F+
Sbjct: 265 TTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEE 324
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
MK GC PD YN +I N S+G + + K M S C + TY +I GL K +
Sbjct: 325 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 384
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A EVF++M +GI + T + ++ LC A + + G + + Y
Sbjct: 385 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 444
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
+L G D+ M +G+ D Y +I GLC G+ + A+ V+ KG
Sbjct: 445 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 504
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ Y+ + L N + A +LFR++
Sbjct: 505 MRPTPKAYNPVLQSLFRRNNIRDALSLFREM 535
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 171/399 (42%), Gaps = 37/399 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN V L + V+ M +EG +PD+ T +IV++ + GQ+ +A +L
Sbjct: 193 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL 252
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++ D G D + N ++ LC + A L + K V +V T+NI+I+ K+
Sbjct: 253 NQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKV 312
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G R+ +E+ G +PD +T++ LI+ L G++ A+++ M+ GC T Y
Sbjct: 313 GDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITY 372
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I +E + + M N T+ LI GL K +K+ DA E+ +M+
Sbjct: 373 NTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMIS 432
Query: 401 RGIVPSTGTITSFL-----------------------------------EPLCSYGPPHA 425
G+ P+ T S L LC G
Sbjct: 433 EGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQV 492
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ + + R G + + AY +L+ L L L+ EM E G P D Y+ V
Sbjct: 493 ALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFR 552
Query: 486 GLC-NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
GLC G ++ A M E + KGF P + L+ LL
Sbjct: 553 GLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 591
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 183/418 (43%), Gaps = 54/418 (12%)
Query: 54 HVLKELSDLFQIS--SHNSFPN--VYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQK 109
++ +E++D F+ ++N+F N + +++K +D V E P+ + +
Sbjct: 181 YIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV--MVQEGHDPDVFTYNIVVNC 238
Query: 110 LKGKGVIEDA--LWNVNVD-------LSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVA 160
L G +E+A + N VD + + + + GN EA+ L +K V+
Sbjct: 239 LCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK--GVS 296
Query: 161 KDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
DV ++N+++ AL + + +M G PD T + ++D+ G++ KA+ +
Sbjct: 297 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 356
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------KGKVLFNVM------ 268
L +E G + N ++ LC+++ + A +F+ M + + FN +
Sbjct: 357 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 416
Query: 269 ------------------------TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
TYN +++ + K G + + +L+ + A GF D +T
Sbjct: 417 DKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 476
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
+ LI GL +AGR A++V M+ KG P AYN V+ + + + + ++ M+
Sbjct: 477 YGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 536
Query: 365 SYNCEPNMDTYTRLISGLLKSR-KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
P+ TY + GL + + +A + EM+D+G +P + E L + G
Sbjct: 537 EVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 594
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 125/315 (39%), Gaps = 54/315 (17%)
Query: 245 QRLHVGAASSLFNSMKGKVLFN-------------------VMTYNIVISGWSKLGQVVE 285
++ +G S +S +G+ LF+ + YN +++ + ++
Sbjct: 13 HQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKL 72
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+E V E+ A G PD +TF+ L++ L RA ++ A+ + + M +G PD + ++
Sbjct: 73 LESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQ 132
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
++ G + ++ M C T LI+G K +V DAL ++ + G P
Sbjct: 133 GFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEP 192
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
T +F+ LC G L +
Sbjct: 193 DQITYNTFVNGLCQND-----------------------------------HVGHALKVM 217
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
M + G+ D Y V+ LC GQLE A ++ + + +G P ++ L L
Sbjct: 218 DVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 277
Query: 526 NKLESAYNLFRKIKI 540
N+LE A +L R++ +
Sbjct: 278 NRLEEALDLARQVTV 292
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 4/170 (2%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ ++ ++L M G D+ T +++ +AG+ A+++L +
Sbjct: 441 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 500
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLG- 281
G++ ++ N VL L +R ++ A SLF M G+ + +TY IV G + G
Sbjct: 501 RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPP-DALTYKIVFRGLCRGGG 559
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+ E + E+V +GF P+ +F L EGL G D I + + EK
Sbjct: 560 PIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEK 609
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 189/402 (47%), Gaps = 2/402 (0%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
R + + FFNWA + Y ++ G+ + FD ++ M V
Sbjct: 1153 RHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIP 1212
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ET +I++ +++AG +A+ R+ED+G K D + +VV+ L ++ A S F+
Sbjct: 1213 VETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFD 1272
Query: 258 SMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
S+K + +V+ Y ++ GW + G + E ERV E+ G P+ T+S +I+ L R+G+
Sbjct: 1273 SLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQ 1332
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
I A +VF M + GC P+ +N ++ ++ G ++ ++ Y M C P+ TY
Sbjct: 1333 ITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNF 1392
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
LI + + +A+++ + +G + + + G ++A M+ K + +
Sbjct: 1393 LIESHCRDDNLEEAVKILNS-VKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLK 1451
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
C+ + Y +L+R + M+L L EM E+ + Y +I+ C IG NA
Sbjct: 1452 CRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAY 1511
Query: 498 LVMEESL-RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+E + K PS VY + +L + +L+ L K+
Sbjct: 1512 SFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKM 1553
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 131/267 (49%), Gaps = 4/267 (1%)
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
GN+S EA +F +K + +V +Y++++ AL R +V S+M G +P+
Sbjct: 1296 GNIS-EAERVFGE--MKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNA 1352
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
T + +M ++AG+ K +Q+ +++ G DA + N ++ C+ ++ A + NS
Sbjct: 1353 ITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS 1412
Query: 259 MKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+K N ++N + SKLG V R+ ++ P+++T++ L+
Sbjct: 1413 VKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKST 1472
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC-EPNMDTYTR 377
D +++ M E P+ N Y +IS + +G ++ ++K M C P++ Y
Sbjct: 1473 DMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEM 1532
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIV 404
++ L K+ ++ E+ E+M++RG V
Sbjct: 1533 VLQQLRKAGQLKKHEELVEKMVNRGFV 1559
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 96/243 (39%), Gaps = 38/243 (15%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
G SP+ + +I+ G+ + D A ++ D MK + + ++ Y+ G E
Sbjct: 1175 GHSPE--PYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEA 1232
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
+ + M Y C+P+ ++ +IS L K R+ +A F+ + DR P TS +
Sbjct: 1233 VHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVYTSLVHG 1291
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
C G +A +V FG EM+ +G +
Sbjct: 1292 WCRAG-------NISEAERV------------------FG----------EMKMAGIXPN 1316
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
Y VI LC GQ+ A V E + G P+ + ++ L + + + E ++
Sbjct: 1317 VYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYN 1376
Query: 537 KIK 539
++K
Sbjct: 1377 QMK 1379
>gi|356546852|ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Glycine max]
Length = 481
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 211/433 (48%), Gaps = 22/433 (5%)
Query: 119 ALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHP---NVAKDVKSYNVIVKALGR 175
AL DL+ D+V V+ R +FFNWA K + DV N IV LG+
Sbjct: 57 ALDQCGFDLNHDLVLDVLRRHRSDWRPAHVFFNWASKTTTGYQPSSDV--CNEIVDILGK 114
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ F + VL +M+K D + ++ F+ A +V +AIQ+ R ++FGL+ ++E+
Sbjct: 115 MQRFQELHQVLDEMSKREELLDEAVFATLVRRFVGAHKVDEAIQLFYRRKEFGLELNSEA 174
Query: 236 LNVVLWCLCQRLHVGAASSLF-NSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
+L LC+ HV A +LF NS+K + ++ +N++++GW LG E +RV ++IV
Sbjct: 175 FRTLLMWLCRYKHVEDAEALFHNSVKKGLRADIKMWNVILNGWCVLGNSHEAKRVWRDIV 234
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
A PD T++ I+ L + G++ A+++F M +KG PD N +I
Sbjct: 235 ASPCKPDIFTYATFIKALTKKGKLGTALKLFRGMWDKGGKPDVVICNCIIDALCFKKRIP 294
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR--GIVPSTGTITS 412
E ++ + MS CEPN+ TY LI + K +++ E+ +EM + +P+ T
Sbjct: 295 EALEIFCDMSERGCEPNVATYNSLIKYMCKIQRMKKVYELVDEMERKKGSCLPNAVTYCY 354
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
L+ L P + ++ + GC ++ Y ++LR + + W EM+ +G
Sbjct: 355 LLKSL---KEPGEVCRVLERMERNGCGMNDDVYNMVLRLYMKWDDGDGVRKTWEEMERNG 411
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
+ D Y +I G++++AV +EE + KG P R + KL S+
Sbjct: 412 WGPDRRSYTIMIHENFEKGRVKDAVRYLEEMISKGMVPER-----------RTEKLVSSM 460
Query: 533 NLFRKIKIARQND 545
N+ K + +Q D
Sbjct: 461 NIRLKGRSEKQED 473
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 191/400 (47%), Gaps = 9/400 (2%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ L N + D YN ++ L + +V S+M G+ PD+ T +
Sbjct: 127 DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
+M + RA QV A+ ML + G+ D + ++ + + AA + K ++
Sbjct: 187 LMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV----KARM 242
Query: 264 L-----FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
L +T N++I+G+ KLG+V + +++ +A+GF PD +T++ + GL + +
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 302
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
A++V D M ++G PD YN V++ G +E M C P++ T+ L
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I+ L ++ +AL++ ++ +G+ P T + LC G PH A+ ++++ + GC
Sbjct: 363 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 422
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
Y L+ L GK G LDL +M+ +G P Y +I GLC ++E A
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
V ++ +G + + ++ L + L K++ A+ L ++
Sbjct: 483 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQM 522
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 189/451 (41%), Gaps = 71/451 (15%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV ++N ++KAL R +L +M+ GV PD T + +M F+ G + A+
Sbjct: 177 IKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAAL 236
Query: 219 QM-------------------------LGRLEDF----------GLKFDAESLNVVLWCL 243
++ LGR+ED G + D + N + L
Sbjct: 237 RVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL 296
Query: 244 CQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVL------------ 290
CQ HVG A + + M + +V TYNIV++ K GQ+ E + +L
Sbjct: 297 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDI 356
Query: 291 -----------------------KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+++ +G SPD TF+ LI L + G A+ +F+
Sbjct: 357 TTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEE 416
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
MK GC PD YN +I N S+G + + K M S C + TY +I GL K +
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A EVF++M +GI + T + ++ LC A + + G + + Y
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 536
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
+L G D+ M +G+ D Y +I GLC G+ + A+ V+ KG
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ Y+ + L N + A +LFR++
Sbjct: 597 MRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 171/399 (42%), Gaps = 37/399 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN V L + V+ M +EG +PD+ T +IV++ + GQ+ +A +L
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL 344
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++ D G D + N ++ LC + A L + K V +V T+NI+I+ K+
Sbjct: 345 NQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKV 404
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G R+ +E+ G +PD +T++ LI+ L G++ A+++ M+ GC T Y
Sbjct: 405 GDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITY 464
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I +E + + M N T+ LI GL K +K+ DA E+ +M+
Sbjct: 465 NTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMIS 524
Query: 401 RGIVPSTGTITSFL-----------------------------------EPLCSYGPPHA 425
G+ P+ T S L LC G
Sbjct: 525 EGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQV 584
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ + + R G + + AY +L+ L L L+ EM E G P D Y+ V
Sbjct: 585 ALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFR 644
Query: 486 GLC-NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
GLC G ++ A M E + KGF P + L+ LL
Sbjct: 645 GLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 683
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 141/320 (44%), Gaps = 39/320 (12%)
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
GN EA+ L +K V+ DV ++N+++ AL + + +M G PD
Sbjct: 369 GNRLEEALDLARQVTVK--GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
T + ++D+ G++ KA+ +L +E G + N ++ LC+++ + A +F+
Sbjct: 427 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486
Query: 259 M------KGKVLFNVM------------------------------TYNIVISGWSKLGQ 282
M + + FN + TYN +++ + K G
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 546
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ + +L+ + A GF D +T+ LI GL +AGR A++V M+ KG P AYN
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 606
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR-KVADALEVFEEMLDR 401
V+ + + + + ++ M+ P+ TY + GL + + +A + EM+D+
Sbjct: 607 VLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 666
Query: 402 GIVPSTGTITSFLEPLCSYG 421
G +P + E L + G
Sbjct: 667 GFIPEFSSFRMLAEGLLNLG 686
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 4/170 (2%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ ++ ++L M G D+ T +++ +AG+ A+++L +
Sbjct: 533 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLG- 281
G++ ++ N VL L +R ++ A SLF M G+ + +TY IV G + G
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPP-DALTYKIVFRGLCRGGG 651
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+ E + E+V +GF P+ +F L EGL G D I + + EK
Sbjct: 652 PIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEK 701
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 189/396 (47%), Gaps = 1/396 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ L N + D YN ++ L + +V S+M G+ PD+ T +
Sbjct: 127 DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
+M + RA QV A+ ML + G+ D + ++ + + AA + M +
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+T N++I+G+ KLG+V + +++ +A+GF PD +T++ + GL + + A+
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+V D M ++G PD YN V++ G +E M C P++ T+ LI+ L
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
++ +AL++ ++ +G+ P T + LC G PH A+ ++++ + GC
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L+ L GK G LDL +M+ +G P Y +I GLC ++E A V ++
Sbjct: 427 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+G + + ++ L + L K++ A+ L ++
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQM 522
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 189/451 (41%), Gaps = 71/451 (15%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV ++N ++KAL R +L +M+ GV PD T + +M F+ G + A+
Sbjct: 177 IKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAAL 236
Query: 219 QM-------------------------LGRLEDF----------GLKFDAESLNVVLWCL 243
++ LGR+ED G + D + N + L
Sbjct: 237 RVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL 296
Query: 244 CQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVL------------ 290
CQ HVG A + + M + +V TYNIV++ K GQ+ E + +L
Sbjct: 297 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDI 356
Query: 291 -----------------------KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+++ +G SPD TF+ LI L + G A+ +F+
Sbjct: 357 TTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEE 416
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
MK GC PD YN +I N S+G + + K M S C + TY +I GL K +
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A EVF++M +GI + T + ++ LC A + + G + + Y
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 536
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
+L G D+ M +G+ D Y +I GLC G+ + A+ V+ KG
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ Y+ + L N + A +LFR++
Sbjct: 597 MRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 171/399 (42%), Gaps = 37/399 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN V L + V+ M +EG +PD+ T +IV++ + GQ+ +A +L
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL 344
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++ D G D + N ++ LC + A L + K V +V T+NI+I+ K+
Sbjct: 345 NQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKV 404
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G R+ +E+ G +PD +T++ LI+ L G++ A+++ M+ GC T Y
Sbjct: 405 GDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITY 464
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I +E + + M N T+ LI GL K +K+ DA E+ +M+
Sbjct: 465 NTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMIS 524
Query: 401 RGIVPSTGTITSFL-----------------------------------EPLCSYGPPHA 425
G+ P+ T S L LC G
Sbjct: 525 EGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQV 584
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ + + R G + + AY +L+ L L L+ EM E G P D Y+ V
Sbjct: 585 ALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFR 644
Query: 486 GLC-NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
GLC G ++ A M E + KGF P + L+ LL
Sbjct: 645 GLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 683
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 141/320 (44%), Gaps = 39/320 (12%)
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
GN EA+ L +K V+ DV ++N+++ AL + + +M G PD
Sbjct: 369 GNRLEEALDLARQVTVK--GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
T + ++D+ G++ KA+ +L +E G + N ++ LC+++ + A +F+
Sbjct: 427 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486
Query: 259 M------KGKVLFNVM------------------------------TYNIVISGWSKLGQ 282
M + + FN + TYN +++ + K G
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 546
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ + +L+ + A GF D +T+ LI GL +AGR A++V M+ KG P AYN
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 606
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR-KVADALEVFEEMLDR 401
V+ + + + + ++ M+ P+ TY + GL + + +A + EM+D+
Sbjct: 607 VLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 666
Query: 402 GIVPSTGTITSFLEPLCSYG 421
G +P + E L + G
Sbjct: 667 GFIPEFSSFRMLAEGLLNLG 686
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 162/397 (40%), Gaps = 67/397 (16%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A + N A+ + A + Y I++ LG D M ++++M +EG L +
Sbjct: 55 DAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHS 114
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
+DS Y+ Q+ FD ++++++L L + A + ++N +
Sbjct: 115 FLDS-------YEGQQL----------FD-DAVDLILNQLQPLFGIQADTVVYNHL---- 152
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
N+++ G SK+ +E V E+ A G PD +TF+ L++ L RA ++ A+
Sbjct: 153 ------LNVLVEG-SKMKL---LESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVL 202
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+ + M +G PD + ++ ++ G + ++ M C T LI+G
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
K +V DAL ++ + G P T +F+ LC
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND---------------------- 300
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
G L + M + G+ D Y V+ LC GQLE A ++ +
Sbjct: 301 -------------HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+ +G P ++ L L N+LE A +L R++ +
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 4/170 (2%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ ++ ++L M G D+ T +++ +AG+ A+++L +
Sbjct: 533 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLG- 281
G++ ++ N VL L +R ++ A SLF M G+ + +TY IV G + G
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPP-DALTYKIVFRGLCRGGG 651
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+ E + E+V +GF P+ +F L EGL G D I + + EK
Sbjct: 652 PIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEK 701
>gi|255542990|ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548519|gb|EEF50010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 511
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 213/439 (48%), Gaps = 20/439 (4%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E +L + LS ++ + + R + + + FF++++ P+ + + +YN+I+ L +
Sbjct: 56 MESSLQLHGITLSSSLLHQTLLRLRHNSKIALSFFHYSLSLPSSSVNTTTYNLIIDILSK 115
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ FD ++ M + + P+ T I++ I AG +AI+ +E F AE+
Sbjct: 116 VRQFDVSWQLIIQMDQNNLQPNSHTFLILIRRLISAGFTRQAIRAFDDMESFI----AET 171
Query: 236 LNVVLWC-----LCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVL 290
+N +C LC+ ++ A +FN K + L NV Y ++I GW K+G++ ER +
Sbjct: 172 VNQTHFCFLLDTLCKYGYIKVAVEVFNKRKFRFLPNVRIYTVLIYGWCKIGRIDMAERFI 231
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGR------AGRIDDAI----EVFDTMKEKGCGPDTNAY 340
+E+ G + +T++ L++G+ R GR + I +VFD M++KG PD ++
Sbjct: 232 REMDEMGIEANVVTYNVLLDGICRRAKLQPEGRFERTIMKADKVFDEMRQKGIEPDVTSF 291
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ ++ Y + K M P + TYT ++ L ++ DA E+ E+M+
Sbjct: 292 SILLHVYSRAHKPQLTVDKLKLMEEMGICPTVATYTSVLKCLCSCGRIDDAEELLEQMVR 351
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG-CKLSLTAYKLLLRRLSGFGKCG 459
G+ P+ T F + P A+ +Y+K R+ C S+ Y +LL +
Sbjct: 352 NGVSPNAATYNCFFKEYRGRKDPETALKLYRKIRQENLCDPSVHTYNILLGMFMKLNRFN 411
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
++ ++W++++ SG D + Y ++ GLC + + A E + KG P + + L
Sbjct: 412 IVNEIWNDLRSSGSGPDLDSYTLLVHGLCEKQKWQKACQFFVEMIEKGLLPQKATFEMLY 471
Query: 520 NKLLASNKLESAYNLFRKI 538
L+ SN L + L +K+
Sbjct: 472 AGLIQSNMLRTWRRLKKKL 490
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 131/320 (40%), Gaps = 82/320 (25%)
Query: 266 NVMTYNIVISGWSKLGQ-------VVEMER------------VLKEIVAEGFSPDSLT-- 304
N TYN++I SK+ Q +++M++ +++ +++ GF+ ++
Sbjct: 102 NTTTYNLIIDILSKVRQFDVSWQLIIQMDQNNLQPNSHTFLILIRRLISAGFTRQAIRAF 161
Query: 305 ---------------FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYIS 349
F FL++ L + G I A+EVF+ K + P+ Y +I +
Sbjct: 162 DDMESFIAETVNQTHFCFLLDTLCKYGYIKVAVEVFNKRKFRFL-PNVRIYTVLIYGWCK 220
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK----------SRKVADALEVFEEML 399
+G D ++ + M E N+ TY L+ G+ + R + A +VF+EM
Sbjct: 221 IGRIDMAERFIREMDEMGIEANVVTYNVLLDGICRRAKLQPEGRFERTIMKADKVFDEMR 280
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
+GI P +TSF L Y H K LT KL L
Sbjct: 281 QKGIEPD---VTSFSILLHVYSRAH--------------KPQLTVDKLKL---------- 313
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
M+E G Y V+ LC+ G++++A ++E+ +R G P+ Y+
Sbjct: 314 --------MEEMGICPTVATYTSVLKCLCSCGRIDDAEELLEQMVRNGVSPNAATYNCFF 365
Query: 520 NKLLASNKLESAYNLFRKIK 539
+ E+A L+RKI+
Sbjct: 366 KEYRGRKDPETALKLYRKIR 385
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 191/400 (47%), Gaps = 9/400 (2%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ L N + D YN ++ L + +V S+M G+ PD+ T +
Sbjct: 127 DAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
+M + RA QV A+ ML + G+ D + ++ + + AA + K ++
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV----KARM 242
Query: 264 L-----FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
L +T N++I+G+ KLG+V + +++ +A+GF PD +T++ + GL + +
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 302
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
A++V D M ++G PD YN V++ G +E M C P++ T+ L
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I+ L ++ +AL++ ++ +G+ P T + LC G PH A+ ++++ + GC
Sbjct: 363 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 422
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
Y L+ L GK G LDL +M+ +G P Y +I GLC ++E A
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
V ++ +G + + ++ L + L K++ A+ L ++
Sbjct: 483 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQM 522
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 189/451 (41%), Gaps = 71/451 (15%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV ++N ++KAL R +L +M+ GV PD T + +M F+ G + A+
Sbjct: 177 IKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAAL 236
Query: 219 QM-------------------------LGRLEDF----------GLKFDAESLNVVLWCL 243
++ LGR+ED G + D + N + L
Sbjct: 237 RVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL 296
Query: 244 CQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVL------------ 290
CQ HVG A + + M + +V TYNIV++ K GQ+ E + +L
Sbjct: 297 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDI 356
Query: 291 -----------------------KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+++ +G SPD TF+ LI L + G A+ +F+
Sbjct: 357 TTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEE 416
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
MK GC PD YN +I N S+G + + K M S C + TY +I GL K +
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A EVF++M +GI + T + ++ LC A + + G + + Y
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNS 536
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
+L G D+ M +G+ D Y +I GLC G+ + A+ V+ KG
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ Y+ + L N + A +LFR++
Sbjct: 597 MRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 170/399 (42%), Gaps = 37/399 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN V L + V+ M +EG +PD+ T +IV++ + GQ+ +A +L
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL 344
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++ D G D + N ++ LC + A L + K V +V T+NI+I+ K+
Sbjct: 345 NQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKV 404
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G R+ +E+ G +PD +T++ LI+ L G++ A+++ M+ GC T Y
Sbjct: 405 GDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITY 464
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I +E + + M N T+ LI GL K +K+ DA + +M+
Sbjct: 465 NTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMIS 524
Query: 401 RGIVPSTGTITSFL-----------------------------------EPLCSYGPPHA 425
G+ P+ T S L LC G
Sbjct: 525 EGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQV 584
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ + + R G + + AY +L+ L L L+ EM E G P D Y+ V
Sbjct: 585 ALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFR 644
Query: 486 GLC-NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
GLC G ++ A M E + KGF P + L+ LL
Sbjct: 645 GLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL 683
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 141/320 (44%), Gaps = 39/320 (12%)
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
GN EA+ L +K V+ DV ++N+++ AL + + +M G PD
Sbjct: 369 GNRLEEALDLARQVTVK--GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
T + ++D+ G++ KA+ +L +E G + N ++ LC+++ + A +F+
Sbjct: 427 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486
Query: 259 M------KGKVLFNVM------------------------------TYNIVISGWSKLGQ 282
M + + FN + TYN +++ + K G
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGD 546
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ + +L+ + A GF D +T+ LI GL +AGR A++V M+ KG P AYN
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 606
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR-KVADALEVFEEMLDR 401
V+ + + + + ++ M+ P+ TY + GL + + +A + EM+D+
Sbjct: 607 VLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 666
Query: 402 GIVPSTGTITSFLEPLCSYG 421
G +P + E L + G
Sbjct: 667 GFIPEFSSFRMLAEGLLNLG 686
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 162/397 (40%), Gaps = 67/397 (16%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A + N A+ + A + Y I++ LG D M ++++M +EG L +
Sbjct: 55 DAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHS 114
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
+DS Y+ Q+ FD ++++++L L + A + ++N +
Sbjct: 115 FLDS-------YEGQQL----------FD-DAVDLILNQLQPLFGIQADTVVYNHL---- 152
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
N+++ G SK+ +E V E+ A G PD +TF+ L++ L RA ++ A+
Sbjct: 153 ------LNVLVEG-SKMKL---LESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVL 202
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+ + M +G PD + ++ ++ G + ++ M C T LI+G
Sbjct: 203 MLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYC 262
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
K +V DAL ++ + G P T +F+ LC
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND---------------------- 300
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
G L + M + G+ D Y V+ LC GQLE A ++ +
Sbjct: 301 -------------HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+ +G P ++ L L N+LE A +L R++ +
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 384
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 4/170 (2%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ ++ ++L M G D+ T +++ +AG+ A+++L +
Sbjct: 533 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLG- 281
G++ ++ N VL L +R ++ A SLF M G+ + +TY IV G + G
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPP-DALTYKIVFRGLCRGGG 651
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+ E + E+V +GF P+ +F L EGL G D I + + EK
Sbjct: 652 PIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEK 701
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 195/397 (49%), Gaps = 2/397 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A + FF+WA K +V +YN + +AL R + D C++L + G+ P++ T ++
Sbjct: 5 DAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAV 64
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
V+ ++G + KA ++L + + G DA N V+ LC+ + A F SM+ +
Sbjct: 65 VIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEK 124
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
NV+T+ I+I G K ++ E ++ +G P+ T++ LI G + ++ A
Sbjct: 125 --NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 182
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+ MKE G P+ Y+ VI + D K ++ M C PN+ TY L+SGL
Sbjct: 183 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 242
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
++ + +A E+ +EM +RG+ P + + + LC G A+ +++ C +
Sbjct: 243 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 302
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
AY L+ L G+ L+ +M+E+ D + ++ GLC +L+ A V+E
Sbjct: 303 AYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 362
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+ P+ + YS L + L + ++ A +F+++ +
Sbjct: 363 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIV 399
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 185/377 (49%), Gaps = 3/377 (0%)
Query: 161 KDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
K+V ++ +++ L + + M K+G P+ T +++++ F + +V++A +
Sbjct: 124 KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLL 183
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSK 279
L +++ GL + + + V+ C++ V A LF M + + N++TYN ++SG +
Sbjct: 184 LKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCR 243
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G + E +L E+ G PD ++ L+ GL + G+ID A++VF+ C PD A
Sbjct: 244 NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 303
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y+ +I+ G DE K ++ M +CEP++ T+T L+ GL K ++ +A +V E M
Sbjct: 304 YSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 363
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
DR P+ T +S ++ LC G A ++K+ G + ++ Y L+
Sbjct: 364 DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVD 423
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRLVYSKL 518
L L EM +G D Y +I GLC G+ A + + ++ FC P + YS L
Sbjct: 424 SALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGD-MKAKFCNPDVITYSCL 482
Query: 519 SNKLLASNKLESAYNLF 535
+++ A LF
Sbjct: 483 IGGFCKLERIDMARTLF 499
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 183/381 (48%), Gaps = 5/381 (1%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N +V +Y+ ++ L + V M G+ P++ T + ++ F V A
Sbjct: 366 NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 425
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISG 276
+ ++ + G D + N ++ LC+ A+ LF MK K +V+TY+ +I G
Sbjct: 426 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGG 485
Query: 277 WSKLGQVVEMERVL-KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
+ KL + ++M R L +++ + PD +TFS L+EG AG +DDA + + M C P
Sbjct: 486 FCKL-ERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSP 544
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D Y +++ + VG E + K M+ C+PN+ TYT LI ++ K A +
Sbjct: 545 DVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLL 604
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGP-PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
EEM+ G+ P+ T S + C G A ++ + R CK + AY++++ L
Sbjct: 605 EEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCR 664
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE-SLRKGFCPSRL 513
G+ L+L +++SG P +IY +I GLC +L A+ V+EE +L + P+
Sbjct: 665 TGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAE 724
Query: 514 VYSKLSNKLLASNKLESAYNL 534
Y + +L + E A L
Sbjct: 725 AYEAVIQELAREGRHEEANAL 745
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 176/384 (45%), Gaps = 2/384 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ DV +Y+ ++ L + D C + M + PD+ T + +MD + ++ +A
Sbjct: 296 DCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEA 355
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
Q+L +ED + + + ++ LC+ V A +F M + + NV+TYN +I G
Sbjct: 356 QQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHG 415
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ V +++E+ A G PD +T++ LI+GL + GR +A +F MK K C PD
Sbjct: 416 FCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPD 475
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y+ +I + + D + M P++ T++ L+ G + V DA + E
Sbjct: 476 VITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLE 535
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
EM+ P T TS ++ C G A + K+ K GC+ ++ Y L+ G
Sbjct: 536 EMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAG 595
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL-VY 515
K + L EM +G + Y +I G C G LE A ++E R C + + Y
Sbjct: 596 KPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAY 655
Query: 516 SKLSNKLLASNKLESAYNLFRKIK 539
+ + L + ++ +A L IK
Sbjct: 656 RVMMDGLCRTGRMSAALELLEAIK 679
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 177/390 (45%), Gaps = 7/390 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ + D SY+ ++ L + D V D + PD+ S ++ +AG+
Sbjct: 257 MRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGR 316
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
+ +A ++ ++ + + D + ++ LC+ + A + +M+ + NV+TY+
Sbjct: 317 LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 376
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G K GQV + + V K ++ G P+ +T++ LI G +D A+ + + M G
Sbjct: 377 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 436
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
C PD YN +I G E + + M + C P++ TY+ LI G K ++ A
Sbjct: 437 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 496
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+F++ML + ++P T ++ +E C+ G A + ++ C + Y L +
Sbjct: 497 TLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSL---V 553
Query: 453 SGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
GF K G +++ + M + G + Y +I C G+ A ++EE + G
Sbjct: 554 DGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQ 613
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P+ + Y L + LE A + +++
Sbjct: 614 PNVITYRSLIGGFCGTGDLEEARKILERLE 643
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 217/443 (48%), Gaps = 22/443 (4%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L+++K G DA + ++ + N G+L G AM + PNV +
Sbjct: 12 LLEEMKSAGFAPDAFTHT------PIITAMANAGDLDG-AMDHLRSMGC-DPNVV----T 59
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y ++ A R K + +L +M + G P+L T ++++D+ + V A ++ ++
Sbjct: 60 YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVV 284
+ G + + N ++ C+R +V A L M K + NV+TY+ +I G K + +
Sbjct: 120 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 179
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E + VL+E+ A G +PD+ T+S LI GL +A +I++A ++ M GC PD Y+++I
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG-I 403
+ G E K + M P++ TY +I GL K K+A+A + ++M + G +
Sbjct: 240 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDV 299
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+P T ++ + LC A + + K GC + Y ++ G KCG L +
Sbjct: 300 LPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTII---DGLCKCGRLEE 356
Query: 464 ---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV-YSKLS 519
L M+ +G + Y +I+GLC +++ A VMEE +R CP LV Y+ +
Sbjct: 357 AEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEE-MRNAGCPPNLVTYNTMV 415
Query: 520 NKLLASNKLESAYNLFRKIKIAR 542
N L S +++ A L +++K R
Sbjct: 416 NGLCVSGRIKEAQQLVQRMKDGR 438
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 181/400 (45%), Gaps = 37/400 (9%)
Query: 96 LLPEERLRGVFLQKLKGKGVIEDALWNVN-VDLSLDVVGKVVN----------------- 137
LL E R RG L V+ DAL ++ V + DVV K++
Sbjct: 79 LLEEMRERGCP-PNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGF 137
Query: 138 --RGNLSGEAMVLFFNWAIK-HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
RGN+ +L A PNV +Y+ ++ L + + F VL +M GV
Sbjct: 138 CKRGNVDDARKLLGIMVAKGMRPNVV----TYSALIDGLCKSQKFLEAKEVLEEMKASGV 193
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
PD T S ++ +A ++ +A QML R+ G D + ++ C+ + A
Sbjct: 194 TPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQK 253
Query: 255 LFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG-FSPDSLTFSFLIEGL 312
M K + +V+TYN VI G KLG++ E + +L ++ G PD +T+S +I GL
Sbjct: 254 TLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGL 313
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
++ + +A ++ D M + GC PD Y +I G +E +GM C PN+
Sbjct: 314 CKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNV 373
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
TYT LISGL K+RKV +A V EEM + G P+ T + + LC G A + ++
Sbjct: 374 VTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQR 433
Query: 433 AR--KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+ + C Y+ ++ L M DL E ++
Sbjct: 434 MKDGRAECSPDAATYRTIVNAL-------MSSDLVQEAEQ 466
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 158/332 (47%), Gaps = 9/332 (2%)
Query: 211 AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTY 270
AG ++ A+++L ++ G DA + ++ + + A SM NV+TY
Sbjct: 3 AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDP--NVVTY 60
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
+I+ +++ ++ E ++L+E+ G P+ +T++ L++ L + + A +V M E
Sbjct: 61 TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
G P+ +N+++ + G+ D+ K M + PN+ TY+ LI GL KS+K +
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 180
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A EV EEM G+ P T ++ + LC A M ++ GC + Y ++
Sbjct: 181 AKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIH 240
Query: 451 RLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
F K G LL+ EM++ D Y VI GLC +G++ A +++++ G
Sbjct: 241 ---AFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297
Query: 508 -FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P + YS + N L S+ L A L ++
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRM 329
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 120/256 (46%), Gaps = 3/256 (1%)
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
+L+E+ + GF+PD+ T + +I + AG +D A+ D ++ GC P+ Y A+I+ +
Sbjct: 12 LLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPNVVTYTALIAAFA 68
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTG 408
+E MK + M C PN+ TY L+ L K V A +V ++M++ G P+
Sbjct: 69 RAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVM 128
Query: 409 TITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM 468
T S ++ C G A + G + ++ Y L+ L K ++ EM
Sbjct: 129 TFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM 188
Query: 469 QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
+ SG D Y +I GLC ++E A ++ G P +VYS + + S KL
Sbjct: 189 KASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKL 248
Query: 529 ESAYNLFRKIKIARQN 544
A ++++ R++
Sbjct: 249 LEAQKTLQEMRKQRKS 264
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 85/191 (44%), Gaps = 3/191 (1%)
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTG 408
+ GD ++ + M S P+ T+T +I+ + + + A++ M G P+
Sbjct: 2 NAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVV 58
Query: 409 TITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM 468
T T+ + AM + ++ R+ GC +L Y +L+ L G D+ +M
Sbjct: 59 TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 118
Query: 469 QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
E G+ + + ++ G C G +++A ++ + KG P+ + YS L + L S K
Sbjct: 119 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKF 178
Query: 529 ESAYNLFRKIK 539
A + ++K
Sbjct: 179 LEAKEVLEEMK 189
>gi|357134597|ref|XP_003568903.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Brachypodium distachyon]
Length = 537
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 195/407 (47%), Gaps = 5/407 (1%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L+ G + AL ++ DVV +V+ + + + +LFFNWA P A ++
Sbjct: 89 ILKSSDGDTDLGKALHRFAGEMDEDVVLRVLQKQRSNWQVALLFFNWAAGLPAYAHGPRT 148
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKE--GVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
Y ++ LGR K M + ++ +E G+ T +++++ + A +V +AI+M +
Sbjct: 149 YTEMLDILGRMKKVKLMTQLFDEIPEERRGLVVTNRTFAVLLNRYAGAHKVQEAIEMFYK 208
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQV 283
+D+G + D ++L LC+ HV A +LF K + + ++NI+++GW G +
Sbjct: 209 RKDYGFEVDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSL 268
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ +R+ +I+A PD T+ I L +AG++ A+++F +M EKG PD N +
Sbjct: 269 PDAKRIWNQIIASKLKPDLFTYGTFINSLTKAGKLSTAVKLFTSMWEKGINPDVAICNCI 328
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I E + ++ M+ C+ ++ TY LI K R+ E+ ++M ++G
Sbjct: 329 IDQLCFKKKIPEALDIFREMTDRGCQADVATYNTLIKYFCKIRRTEKVYELLDDMENKGC 388
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T + L+ + P + + ++ K GC+L Y L+L +
Sbjct: 389 SPNNMTYSYILK---TTEKPKDVIHLLQRMEKSGCRLDSDTYNLILNLYVSMKYENGVQQ 445
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
+W EM+ +G D + ++ GL + G+L+ A+ +G P
Sbjct: 446 VWDEMERNGSGPDQRSFTIMVHGLHSQGRLDQALQYYTTMKSRGMTP 492
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 154/332 (46%), Gaps = 26/332 (7%)
Query: 97 LPEERLRG---------VFLQKLKGKGVIEDAL--------WNVNVDL-SLDVVGKVVNR 138
+PEER RG V L + G +++A+ + VDL ++ + R
Sbjct: 172 IPEER-RGLVVTNRTFAVLLNRYAGAHKVQEAIEMFYKRKDYGFEVDLVGFQILLMSLCR 230
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
EA LF + P V +KS+N+I+ + + + + + PDL
Sbjct: 231 YKHVEEAEALFLQKKDEFPPV---IKSWNIILNGWCVKGSLPDAKRIWNQIIASKLKPDL 287
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
T ++S +AG++ A+++ + + G+ D N ++ LC + + A +F
Sbjct: 288 FTYGTFINSLTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALDIFRE 347
Query: 259 MKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
M + +V TYN +I + K+ + ++ +L ++ +G SP+++T+S++++ +
Sbjct: 348 MTDRGCQADVATYNTLIKYFCKIRRTEKVYELLDDMENKGCSPNNMTYSYILKTTEKP-- 405
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
D I + M++ GC D++ YN +++ Y+S+ + + + M P+ ++T
Sbjct: 406 -KDVIHLLQRMEKSGCRLDSDTYNLILNLYVSMKYENGVQQVWDEMERNGSGPDQRSFTI 464
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
++ GL ++ AL+ + M RG+ P T
Sbjct: 465 MVHGLHSQGRLDQALQYYTTMKSRGMTPEPRT 496
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 113/265 (42%), Gaps = 42/265 (15%)
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G K+ + +EM K+ GF D + F L+ L R +++A +F K+
Sbjct: 194 AGAHKVQEAIEMFYKRKDY---GFEVDLVGFQILLMSLCRYKHVEEAEALF-LQKKDEFP 249
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P ++N +++ + G + + + + + +P++ TY I+ L K+ K++ A+++
Sbjct: 250 PVIKSWNIILNGWCVKGSLPDAKRIWNQIIASKLKPDLFTYGTFINSLTKAGKLSTAVKL 309
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F M ++GI P ++ LC +KK
Sbjct: 310 FTSMWEKGINPDVAICNCIIDQLC-----------FKK---------------------- 336
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
K LD++ EM + G +D Y +I C I + E ++++ KG P+ +
Sbjct: 337 --KIPEALDIFREMTDRGCQADVATYNTLIKYFCKIRRTEKVYELLDDMENKGCSPNNMT 394
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
YS + L + K + +L ++++
Sbjct: 395 YSYI---LKTTEKPKDVIHLLQRME 416
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 219/469 (46%), Gaps = 10/469 (2%)
Query: 88 SSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMV 147
S + E P +R+ + + K + ++ +L + +S VV V+ R +G
Sbjct: 4 SGEIIKETADPTKRICKIMISCPKLE--LDTSLSESGIRVSPIVVENVLKRFENAGMLAY 61
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
FF WA K N +++Y+ ++++L + + + M ++++ M + ++ET I+M
Sbjct: 62 QFFEWAGKQRNYTHSIRAYHTMIESLAKIRQYQIMWDLVNKMRSLKI-LNVETFCIIMRK 120
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNV 267
+ R+ +V +A+ +E + + + + N +L LC+ +V A +FN MK + + +
Sbjct: 121 YARSQKVKEAVYTFNIMEKYDVPPNLAAFNSLLSALCKSKNVVKAQEIFNGMKDQFIPDS 180
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
TY+I++ GW K + + + +E+V G PD +T+ +++ L +AGR+D+A+ +
Sbjct: 181 KTYSILLEGWGKAPNLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKE 240
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M C P + Y+ ++ Y ++ + + M E ++ Y LI K K
Sbjct: 241 MDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNK 300
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A V EM +GI P++ T L L S G A ++++ KV C Y +
Sbjct: 301 LKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKV-CDPDADTYTM 359
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
+++ K M L +W M+ + + +I GLC G A +++EE + KG
Sbjct: 360 MIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEEMIEKG 419
Query: 508 FCPSRLVYSKLSNKLLASNK------LESAYNLFRKIKIARQNDYARRL 550
PS + + KL L+ + L+ NL K + Q A L
Sbjct: 420 IRPSSVTFGKLKQLLIKEGREDVLEFLQEKMNLLVKEPLCDQEIIANEL 468
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 198/415 (47%), Gaps = 38/415 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV SY ++ L + D C V+ M + G P++ T ++D F R G + A++++
Sbjct: 113 DVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELV 172
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSK 279
++ + G + +A + N ++ LC + +A LF M+ G +V TY+ ++ K
Sbjct: 173 RKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVK 232
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G+V + R+++ +V++G SP+ +T+S L+ GL +AG++D+A + M GC P+
Sbjct: 233 SGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVT 292
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YN +I + +G DE + M C+PN+ TYT L+ K K DA+ + E M+
Sbjct: 293 YNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMV 352
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC- 458
++G VP+ T S L+ C A + + GC ++ +Y ++ L K
Sbjct: 353 EKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVH 412
Query: 459 -GMLL---------------------------------DLWHEMQESGYPSDGEIYEYVI 484
G+LL +L++ +QESG + Y ++
Sbjct: 413 EGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLV 472
Query: 485 AGLCNIGQLENAVLVMEESLRKGFC-PSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GLC + + A ++ E RK C P + Y+ + + L S +++ AY LF ++
Sbjct: 473 HGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQM 527
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 189/388 (48%), Gaps = 12/388 (3%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PN+ +YN I+ + D ++L +M G P++ T ++++D+F + G+
Sbjct: 288 PNIV----TYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAED 343
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVIS 275
AI ++ + + G + + N +L C++ V A L +SM K + NV++YN VI+
Sbjct: 344 AIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIA 403
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G K +V E +L+++++ PD +TF+ +I+ + + R+D A E+F+ ++E GC P
Sbjct: 404 GLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTP 463
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMS-SYNCEPNMDTYTRLISGLLKSRKVADALEV 394
+ YN+++ FD+ + M+ C P++ TY +I GL KS++V A ++
Sbjct: 464 NLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKL 523
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F +ML G+ P T + + LC + A + + K G Y L + G
Sbjct: 524 FLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTL---IDG 580
Query: 455 FGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
F K G L L++ + G D + I L G+L A ++E LR G P
Sbjct: 581 FCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPD 640
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ Y+ L +++ E A +LF ++
Sbjct: 641 TVTYNTLLKGFCDASRTEDAVDLFEVMR 668
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 151/312 (48%), Gaps = 1/312 (0%)
Query: 228 GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEME 287
GLK A +L LC A F M + +TYN +I+G SK ++ +
Sbjct: 5 GLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAI 64
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
R+L+E+V GF+P+ +++ ++ G +A R+++A+ + + M +GC PD +Y VI+
Sbjct: 65 RLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGL 124
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
+ DE + M C+PN+ TY L+ G + + A+E+ +M +RG P+
Sbjct: 125 CKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNA 184
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVG-CKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
T + + LCS +A+ ++K+ + G C + Y ++ L GK L
Sbjct: 185 ITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVE 244
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
M G + Y ++ GLC G+L+ A +++ R G P+ + Y+ + +
Sbjct: 245 AMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLG 304
Query: 527 KLESAYNLFRKI 538
+++ AY+L ++
Sbjct: 305 RIDEAYHLLEEM 316
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 154/325 (47%), Gaps = 2/325 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ ++ + C +LS M ++G P++ + + V+ +A +V++ + +L ++
Sbjct: 362 TYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQM 421
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQV 283
D + N ++ +C+ V A LFN ++ N++TYN ++ G K +
Sbjct: 422 LSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRF 481
Query: 284 VEMERVLKEIV-AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ E +L+E+ +G SPD +T++ +I+GL ++ R+D A ++F M G PD Y+
Sbjct: 482 DQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSI 541
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
VIS+ DE + M +P TY LI G K+ + ALE+ + +L +G
Sbjct: 542 VISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKG 601
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P T + F++ L G A + + + G Y LL+ + +
Sbjct: 602 SYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAV 661
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGL 487
DL+ M++ G D Y ++ L
Sbjct: 662 DLFEVMRQCGCEPDNATYTTLVGHL 686
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 139/298 (46%), Gaps = 6/298 (2%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV SYN ++ L + +L M PD+ T + ++D+ + +V
Sbjct: 393 PNVV----SYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDI 448
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK--VLFNVMTYNIVI 274
A ++ +++ G + + N ++ LC+ A L M K +++TYN VI
Sbjct: 449 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVI 508
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G K +V ++ +++++G +PD +T+S +I L + +D+A V + M + G
Sbjct: 509 DGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFD 568
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P Y +I + G+ D+ ++ + + S P++ T++ I L K ++ A E+
Sbjct: 569 PGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGEL 628
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
E ML G+VP T T + L+ C A+ +++ R+ GC+ Y L+ L
Sbjct: 629 LETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 686
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 102/212 (48%), Gaps = 1/212 (0%)
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M KG + +++ G + + +++ MS C P+ TY +I+GL KS +
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSK-TCPPDSVTYNTMINGLSKSDR 59
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ DA+ + EEM+D G P+ + + L C A+ + ++ GC + +Y
Sbjct: 60 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
++ L + + +M + G + Y ++ G C +G L+ AV ++ + +G
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ P+ + Y+ + + L + KL+SA LF++++
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEME 211
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 92/190 (48%), Gaps = 34/190 (17%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+A D +Y++++ +L + +F D NVL M K G +P T ++D F + G + KA+
Sbjct: 532 LAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKAL 591
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
++L L G D V+T++I I S
Sbjct: 592 EILQLLLSKGSYPD----------------------------------VVTFSIFIDWLS 617
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G++ + +L+ ++ G PD++T++ L++G A R +DA+++F+ M++ GC PD
Sbjct: 618 KRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNA 677
Query: 339 AYNAVISNYI 348
Y ++ + +
Sbjct: 678 TYTTLVGHLV 687
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 222/484 (45%), Gaps = 12/484 (2%)
Query: 63 FQISS--HNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDAL 120
F IS +N F V R N V + + DEF E++ + +E AL
Sbjct: 31 FHISRVLNNDF--VESTERKNGVGLVCPEKHEDEFAGEVEKIYRILRNHHSRVPKLELAL 88
Query: 121 WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFD 180
+DL ++ +V++R +G FF WA K P + +V L + + F
Sbjct: 89 NESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFG 148
Query: 181 FMCNVLSDMAKEGVNPDL---ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLN 237
+ ++ +M K NP+L E ++M F A V KA+++L + +GL+ D
Sbjct: 149 AVWGLIEEMRK--TNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFG 206
Query: 238 VVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
+L LC+ V AS +F M+ K N+ + ++ GW + G+++E + VL ++ G
Sbjct: 207 CLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAG 266
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD-FDEC 356
PD + F+ L+ G AG++ DA ++ + M+++G P+ N Y +I DE
Sbjct: 267 LEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEA 326
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
M+ + M Y CE ++ TYT LISG K + V ++M +G++PS T +
Sbjct: 327 MRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVA 386
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
+ + +K ++ GC L Y +++R G+ + LW+EM+ +G
Sbjct: 387 HEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPG 446
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGF--CPSRLVYSKLSNKLLASNKLESAYNL 534
+ + +I G + G L A +E + +G P L N L+ +KLE A ++
Sbjct: 447 VDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDV 506
Query: 535 FRKI 538
+ I
Sbjct: 507 WSCI 510
>gi|225447826|ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Vitis vinifera]
Length = 679
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 207/425 (48%), Gaps = 1/425 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L NVDLS +V V+ R + + FF WA + + ++YN ++ LGR
Sbjct: 222 MEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGR 281
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ F+ M +L +M ++G+ +ET SI + +F A + KA+ + ++ + ++
Sbjct: 282 TRQFESMMGMLGEMGEKGLL-TMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDT 340
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
+N +L L + A +LF ++ + N+ TY ++++GW ++ +VE R E++
Sbjct: 341 INCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMID 400
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+GF PD + ++EGL + + DAI++F+ MK KG P+ Y +I + E
Sbjct: 401 KGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQE 460
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
++Y+ M C+P+ YT LI+G +K+ + +EM ++G T + ++
Sbjct: 461 AVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIK 520
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
+ + P A+ +YKK + G + +L Y ++++ M +W EM G
Sbjct: 521 LMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRNYEMGCAVWEEMGRKGCCP 580
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
D Y I GL G+ E A +EE + KG +L Y+K + + K + L
Sbjct: 581 DDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELA 640
Query: 536 RKIKI 540
RK+K
Sbjct: 641 RKMKF 645
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 136/320 (42%), Gaps = 2/320 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K N V + N ++ LGR K L + ++ P+L T +++++ + R
Sbjct: 329 MKRYNFDAGVDTINCLLDNLGRAKLGK-EAQALFEKLEDRFTPNLRTYTVLLNGWCRIKN 387
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
+ +A + + D G K D + + +L L + A LF MK K NV TY I
Sbjct: 388 LVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTI 447
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I K ++ E E+V G PD+ ++ LI G G ++D + MKEKG
Sbjct: 448 LIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKG 507
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
C D YNA+I + D+ ++ YK M + + TY ++ +R
Sbjct: 508 CPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRNYEMGC 567
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
V+EEM +G P + F+ L +G A ++ + G K Y
Sbjct: 568 AVWEEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADF 627
Query: 453 SGFGKCGMLLDLWHEMQESG 472
S GK +L +L +M+ G
Sbjct: 628 SRAGKPDILEELARKMKFEG 647
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 207/424 (48%), Gaps = 1/424 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L NVDLS +V V+ R + + FF WA + + ++YN ++ LGR
Sbjct: 222 MEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGR 281
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ F+ M +L +M ++G+ +ET SI + +F A + KA+ + ++ + ++
Sbjct: 282 TRQFESMMGMLGEMGEKGLL-TMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDT 340
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
+N +L L + A +LF ++ + N+ TY ++++GW ++ +VE R E++
Sbjct: 341 INCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMID 400
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+GF PD + ++EGL + + DAI++F+ MK KG P+ Y +I + E
Sbjct: 401 KGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMKE 460
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
++Y+ M C+P+ YT LI+G +K+ + +EM ++G T + ++
Sbjct: 461 AVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIK 520
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
+ + P A+ +YKK + G + +L Y ++++ M +W EM G
Sbjct: 521 LMTNRQMPDDAVRIYKKMIQNGIQPTLHTYNMMMKSYFYTRNYEMGCAVWKEMGRKGCCP 580
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
D Y I GL G+ E A +EE + KG +L Y+K + + K + L
Sbjct: 581 DDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELA 640
Query: 536 RKIK 539
RK+K
Sbjct: 641 RKMK 644
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 137/320 (42%), Gaps = 2/320 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K N V + N ++ LGR K L + ++ P+L T +++++ + R
Sbjct: 329 MKRYNFDAGVDTINCLLDNLGRAKLGK-EAQALFEKLEDRFTPNLRTYTVLLNGWCRIKN 387
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
+ +A + + D G K D + + +L L + A LF MK K NV TY I
Sbjct: 388 LVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTI 447
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I K ++ E E+V G PD+ ++ LI G G ++D + MKEKG
Sbjct: 448 LIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKG 507
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
C D YNA+I + D+ ++ YK M +P + TY ++ +R
Sbjct: 508 CPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQPTLHTYNMMMKSYFYTRNYEMGC 567
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
V++EM +G P + F+ L +G A ++ + G K Y
Sbjct: 568 AVWKEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADF 627
Query: 453 SGFGKCGMLLDLWHEMQESG 472
S GK +L +L +M+ G
Sbjct: 628 SRAGKPDILEELARKMKFEG 647
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 139/300 (46%), Gaps = 8/300 (2%)
Query: 108 QKLKGKGVIEDALWNVNVDLSLDVVGKVVN---RGNLSGEAMVLFFNWAIKHPNVAKDVK 164
++ K GV E + N D +D + +++ R L EA LF + +++
Sbjct: 318 ERKKAVGVFE-LMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDR---FTPNLR 373
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y V++ R K ++M +G PD+ +++ ++ + AI++ +
Sbjct: 374 TYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVM 433
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ G + + +++ LC+++ + A F+ M + Y +I+G+ ++
Sbjct: 434 KAKGPSPNVRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKM 493
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
++ +LKE+ +G D T++ LI+ + DDA+ ++ M + G P + YN +
Sbjct: 494 DKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQPTLHTYNMM 553
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ +Y +++ +K M C P+ ++Y I GL++ + +A EEM+++G+
Sbjct: 554 MKSYFYTRNYEMGCAVWKEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGM 613
>gi|413949009|gb|AFW81658.1| hypothetical protein ZEAMMB73_233967 [Zea mays]
Length = 637
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 203/438 (46%), Gaps = 2/438 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E AL ++ L VV V++R + FF WA +Y ++ LG+
Sbjct: 179 LEAALSALSPPLCEAVVLAVLHRFKHAHRPSYRFFRWATASGGFTHTTITYCKMLLILGK 238
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ F+ M +L +M K G ++ + + SF AG++ A+ + + G ES
Sbjct: 239 TRQFESMVALLQEMGKAGTL-SMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVES 297
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
N +L L A +F+ M G+ ++ +Y ++ W +VE RV E++
Sbjct: 298 FNCLLVALANEGLGREARQVFDKMLGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLE 357
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+G PD + + +IEGL R R +A+++F+ MK KG P+ Y +I N+ G D
Sbjct: 358 KGMKPDVVVHNTMIEGLLRGQRQHEAVKMFELMKAKGPPPNVWTYTMLICNHCKRGKMDM 417
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
M+ ++ M C+P++ TYT L+ G ++++ V EEM +G P T + ++
Sbjct: 418 AMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIK 477
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR-LSGFGKCGMLLDLWHEMQESGYP 474
L + P A +YKK K G ++ Y ++++ G M +W EM G
Sbjct: 478 LLTNRKMPDDAARIYKKMIKKGLDPTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRGIC 537
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
D Y I+G G+ E A +EE + KG ++ +K + L + KL+ Y L
Sbjct: 538 PDVNSYTVFISGHIRHGRPEEAYKYIEEMINKGMKAPQIDCNKFAADLSKAGKLDMLYEL 597
Query: 535 FRKIKIARQNDYARRLWR 552
+K+K A + D + ++
Sbjct: 598 AQKVKFAGKFDVSNAFYQ 615
>gi|225461528|ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Vitis vinifera]
Length = 546
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 190/399 (47%), Gaps = 6/399 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIK---HPNVAKDVKSYNVIVKA 172
IE AL + L+ D+V V+ R +FFNWA + + +N I+
Sbjct: 105 IEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGIESGYSPGCGVHNEILDI 164
Query: 173 LGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
LGR + F M + +M+K + T ++++ + A + +A+++ + + G + D
Sbjct: 165 LGRMRRFHEMTQLFDEMSKRKGLVNERTFGVLLNRYAAAHKTEEAVKIFNKRKGLGFELD 224
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
+ +L LC+ HV A LF+S K + ++ + N++++GW LG + E +R +
Sbjct: 225 LIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILNGWCVLGSLREAKRFWND 284
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
I+ PD T+ I L +AG++ A+++F M EKGC PD N +I
Sbjct: 285 IITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKR 344
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
E ++ + M+ +C+P++ TY LI L K ++ E+ ++M +G +P+ T
Sbjct: 345 IPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGY 404
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
L+ S P + ++ + GC+++ Y L+L+ +G L EM+ +G
Sbjct: 405 LLK---STKKPEEVPGILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNG 461
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
D Y +I GL + G++++A+ ++ G P
Sbjct: 462 MGPDQRTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPE 500
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 119/253 (47%), Gaps = 12/253 (4%)
Query: 162 DVKSYNVIVKA---LGR-RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
D+KS NVI+ LG R+ F ++++ K PD T I ++S +AG++ A
Sbjct: 258 DIKSMNVILNGWCVLGSLREAKRFWNDIITSKCK----PDKFTYGIFINSLTKAGKLSTA 313
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
+++ + + G D N ++ LC + + A + M + +V TYN +I
Sbjct: 314 VKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKH 373
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K+ + ++ +L ++ +G P++ T+ +L++ + + +E M+ GC +
Sbjct: 374 LCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLKSTKKPEEVPGILE---RMERNGCRMN 430
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
++ YN ++ Y+ G + M P+ TYT +I GL ++ DAL F+
Sbjct: 431 SDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFK 490
Query: 397 EMLDRGIVPSTGT 409
+M G+VP T
Sbjct: 491 QMTLMGMVPEPRT 503
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 117/275 (42%), Gaps = 39/275 (14%)
Query: 245 QRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+R H + LF+ M K K L N T+ ++++ ++ + E ++ + GF D +
Sbjct: 169 RRFH--EMTQLFDEMSKRKGLVNERTFGVLLNRYAAAHKTEEAVKIFNKRKGLGFELDLI 226
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
F L+ L R ++ A +F + K + PD + N +++ + +G E +++ +
Sbjct: 227 AFQTLLMSLCRYKHVEMAEFLFHSKKNE-FPPDIKSMNVILNGWCVLGSLREAKRFWNDI 285
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ C+P+ TY I+ L K+ K++ A+++F+ M ++G P ++ LC
Sbjct: 286 ITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALC----- 340
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
+KK + L++ EM E D Y +
Sbjct: 341 ------FKK------------------------RIPEALEVLREMNERDCQPDVATYNSL 370
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
I LC I + E ++++ +KG P+ Y L
Sbjct: 371 IKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYL 405
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 93/242 (38%), Gaps = 1/242 (0%)
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+ G+SP + +++ LGR R + ++FD M ++ + + +++ Y +
Sbjct: 147 IESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLVNERTFGVLLNRYAAAHKT 206
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
+E +K + E ++ + L+ L + + V A +F + P ++
Sbjct: 207 EEAVKIFNKRKGLGFELDLIAFQTLLMSLCRYKHVEMAEFLFHSKKNE-FPPDIKSMNVI 265
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
L C G A + CK Y + + L+ GK + L+ M E G
Sbjct: 266 LNGWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGC 325
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
D I +I LC ++ A+ V+ E + P Y+ L L + E Y
Sbjct: 326 NPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYE 385
Query: 534 LF 535
L
Sbjct: 386 LL 387
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 74/169 (43%), Gaps = 1/169 (0%)
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P + ++ L + R+ + ++F+EM R + + T L + A+ +
Sbjct: 153 PGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLVNERTFGVLLNRYAAAHKTEEAVKI 212
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ K + +G +L L A++ LL L + M L+H +++ +P D + ++ G C
Sbjct: 213 FNKRKGLGFELDLIAFQTLLMSLCRYKHVEMAEFLFHS-KKNEFPPDIKSMNVILNGWCV 271
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+G L A + + P + Y N L + KL +A LF+ +
Sbjct: 272 LGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAM 320
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 188/376 (50%), Gaps = 36/376 (9%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YNVI+ A +R + C+++ M ++G PD+ T + VMD ++G+V +A+ + +
Sbjct: 82 TYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEM 141
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
E G + S N ++ LCQ+ + A +F+ M+ + + + +Y I+I G +K G++
Sbjct: 142 ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKL 201
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E ++ + ++ G +P ++T++ +I G+ A +D+A+E+F +M+ KGC P +N +
Sbjct: 202 NEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNIL 261
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I + G DE + K M+ P++ TY+ LISGL +V DA + E+M+ R
Sbjct: 262 IDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 321
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T + + LC G K+AR+V LD
Sbjct: 322 KPTVVTQNTLIHGLCKAG-------RIKEAREV-------------------------LD 349
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
M SG D Y ++ G C GQ E A ++ + + +G P+ + Y+ L + L
Sbjct: 350 ---AMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLC 406
Query: 524 ASNKLESAYNLFRKIK 539
+N+L A +F ++K
Sbjct: 407 KANRLPEACGVFAQMK 422
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 177/348 (50%), Gaps = 1/348 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + V+PD + I++D +AG++ A + +L G+ + ++ LC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
A LF M + + +TYN++I K G + E ++K+++ +G PD +T++
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
+++GL ++GR+++A+ +F+ M+ GC P+ ++N +I D+ + + M + +
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
P+ +Y LI GL K+ K+ +A ++F MLD GI PS T + +C A+
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++K R GC+ S + +L+ GK L M + G+ D Y +I+GL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
C+I ++++A ++E+ +++ P+ + + L + L + +++ A +
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVL 348
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 158/346 (45%), Gaps = 13/346 (3%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YNV++ + D + M +G P T +I++D+ + G++ +A ++L R+
Sbjct: 222 TYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRM 281
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
D G D + + ++ LC V A L M K + V+T N +I G K G++
Sbjct: 282 TDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRI 341
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E VL +V+ G SPD +T++ L+ G RAG+ + A E+ M +G P+ Y A+
Sbjct: 342 KEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTAL 401
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+S E + M S C PN+ TYT LI G + +V L++F EM+ GI
Sbjct: 402 VSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGI 461
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA-------YKLLLRRLSGFG 456
P + LC G A+ + ++ R+ SL + Y+ + L G
Sbjct: 462 SPDHVVYGTLAAELCKSGRSARALEILREGRE-----SLRSEAWGDEVYRFAVDGLLDAG 516
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
K M L +M G E ++AGLC GQ A V+EE
Sbjct: 517 KMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEE 562
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 120/241 (49%)
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
SPDS ++ LI+GL +AG+++DA ++F + G P T AY ++I FD+ +
Sbjct: 7 SPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARE 66
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
+ M+ C P+ TY +I K + +A ++ ++M++ G VP T + ++ LC
Sbjct: 67 LFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLC 126
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
G A++++ + ++GC + ++ ++ L K ++HEM+ P D
Sbjct: 127 KSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSW 186
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y +I GL G+L A + L G PS + Y+ + + + + L+ A LF+ +
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246
Query: 539 K 539
+
Sbjct: 247 R 247
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 126/270 (46%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
+Y I+I G +K G++ + + ++++ G +P ++ ++ LI GL A DDA E+F M
Sbjct: 12 SYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 71
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+GC P YN +I G +E K M P++ TY ++ GL KS +V
Sbjct: 72 NRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRV 131
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+AL +F EM G P+ + + + LC A ++ + +Y +L
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGIL 191
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L+ GK L+ M +SG Y VI G+C L+ A+ + + KG
Sbjct: 192 IDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGC 251
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
PSR ++ L + K++ A+ L +++
Sbjct: 252 RPSRFTFNILIDAHCKRGKMDEAFRLLKRM 281
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%)
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M+ N P+ +Y LI GL K+ K+ DA ++F+++L G+ PST TS + LC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A ++ + GC S Y +++ G DL +M E G+ D Y
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
V+ GLC G++E A+L+ E R G P+R ++ + L +K++ A +F +++
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%)
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M E+ PD+ +Y +I G ++ ++ + P+ YT LI GL +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
DA E+F +M RG PS T ++ C G A + KK + G + Y
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
++ L G+ L L++EM+ G + + +I GLC +++ A V E +
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P Y L + L + KL AY LFR++
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRM 211
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 110/243 (45%), Gaps = 7/243 (2%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V + N ++ L + VL M G +PD+ T + ++ RAGQ +A ++L
Sbjct: 325 VVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLS 384
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+ GL + + ++ LC+ + A +F MK N+ TY +I G+ G
Sbjct: 385 DMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAG 444
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF----DTMKEKGCGPDT 337
QV ++ E+V G SPD + + L L ++GR A+E+ ++++ + G +
Sbjct: 445 QVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV 504
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y + + G + + + + M P + L++GL KS + +A V EE
Sbjct: 505 --YRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEE 562
Query: 398 MLD 400
++D
Sbjct: 563 IMD 565
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 59/314 (18%), Positives = 122/314 (38%), Gaps = 21/314 (6%)
Query: 32 SNLSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRA 91
S ++N L+ K + +LK ++D + ++ + S S+ R+D +R
Sbjct: 254 SRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLI--SGLCSIARVDDARH 311
Query: 92 VDEFLL-----PEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVN--------- 137
+ E ++ P + + L G I++A ++ +S VV
Sbjct: 312 LLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHC 371
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
R + A L + + +A +V +Y +V L + C V + M G P+
Sbjct: 372 RAGQTERARELLSDMVAR--GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
L T + ++ F AGQV +++ G + G+ D + LC+ A +
Sbjct: 430 LFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR 489
Query: 258 SMKGKV---LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
+ + + Y + G G++ ++++V G P + L+ GL +
Sbjct: 490 EGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCK 549
Query: 315 AGRIDDAIEVFDTM 328
+G+ +A V + +
Sbjct: 550 SGQGGEARAVLEEI 563
>gi|147793827|emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
Length = 546
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 190/399 (47%), Gaps = 6/399 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIK---HPNVAKDVKSYNVIVKA 172
IE AL + L+ D+V V+ R +FFNWA + + +N I+
Sbjct: 105 IEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGXESGYSPGCGVHNEILDI 164
Query: 173 LGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
LGR + F M + +M+K + T ++++ + A + +A+++ + + G + D
Sbjct: 165 LGRMRRFHEMTQLFDEMSKRKGLXNERTFGVLLNRYAAAHKTEEAVKIFYKRKGLGFELD 224
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
+ +L LC+ HV A LF+S K + ++ + N++++GW LG + E +R +
Sbjct: 225 LIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILNGWCVLGSLREAKRFWND 284
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
I+ PD T+ I L +AG++ A+++F M EKGC PD N +I
Sbjct: 285 IITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKR 344
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
E ++ + M+ +C+P++ TY LI L K ++ E+ ++M +G +P+ T
Sbjct: 345 IPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGY 404
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
L+ S P + ++ + GC+++ Y L+L+ +G L EM+ +G
Sbjct: 405 LLK---STKKPEEVPGILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNG 461
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
D Y +I GL + G++++A+ ++ G P
Sbjct: 462 MGPDQRTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPE 500
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 119/253 (47%), Gaps = 12/253 (4%)
Query: 162 DVKSYNVIVKA---LGR-RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
D+KS NVI+ LG R+ F ++++ K PD T I ++S +AG++ A
Sbjct: 258 DIKSMNVILNGWCVLGSLREAKRFWNDIITSKCK----PDKFTYGIFINSLTKAGKLSTA 313
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
+++ + + G D N ++ LC + + A + M + +V TYN +I
Sbjct: 314 VKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKH 373
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K+ + ++ +L ++ +G P++ T+ +L++ + + +E M+ GC +
Sbjct: 374 LCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLKSTKKPEEVPGILE---RMERNGCRMN 430
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
++ YN ++ Y+ G + M P+ TYT +I GL ++ DAL F+
Sbjct: 431 SDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFK 490
Query: 397 EMLDRGIVPSTGT 409
+M G+VP T
Sbjct: 491 QMTLMGMVPEPRT 503
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 117/275 (42%), Gaps = 39/275 (14%)
Query: 245 QRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+R H + LF+ M K K L N T+ ++++ ++ + E ++ + GF D +
Sbjct: 169 RRFH--EMTQLFDEMSKRKGLXNERTFGVLLNRYAAAHKTEEAVKIFYKRKGLGFELDLI 226
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
F L+ L R ++ A +F + K + PD + N +++ + +G E +++ +
Sbjct: 227 AFQTLLMSLCRYKHVEMAEFLFHSKKNE-FPPDIKSMNVILNGWCVLGSLREAKRFWNDI 285
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ C+P+ TY I+ L K+ K++ A+++F+ M ++G P ++ LC
Sbjct: 286 ITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALC----- 340
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
+KK + L++ EM E D Y +
Sbjct: 341 ------FKK------------------------RIPEALEVLREMNERDCQPDVATYNSL 370
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
I LC I + E ++++ +KG P+ Y L
Sbjct: 371 IKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYL 405
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 92/239 (38%), Gaps = 1/239 (0%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
G+SP + +++ LGR R + ++FD M ++ + + +++ Y + +E
Sbjct: 150 GYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLXNERTFGVLLNRYAAAHKTEEA 209
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
+K + E ++ + L+ L + + V A +F + P ++ L
Sbjct: 210 VKIFYKRKGLGFELDLIAFQTLLMSLCRYKHVEMAEFLFHSKKNE-FPPDIKSMNVILNG 268
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
C G A + CK Y + + L+ GK + L+ M E G D
Sbjct: 269 WCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPD 328
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
I +I LC ++ A+ V+ E + P Y+ L L + E Y L
Sbjct: 329 VAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELL 387
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 74/169 (43%), Gaps = 1/169 (0%)
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P + ++ L + R+ + ++F+EM R + + T L + A+ +
Sbjct: 153 PGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLXNERTFGVLLNRYAAAHKTEEAVKI 212
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ K + +G +L L A++ LL L + M L+H +++ +P D + ++ G C
Sbjct: 213 FYKRKGLGFELDLIAFQTLLMSLCRYKHVEMAEFLFHS-KKNEFPPDIKSMNVILNGWCV 271
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+G L A + + P + Y N L + KL +A LF+ +
Sbjct: 272 LGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAM 320
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 194/391 (49%), Gaps = 15/391 (3%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVL-------------SDMAKEGVNPDLETLSIVMDSFI 209
V + V + F++F+ NVL S+M G+ PD+ T +I++ +
Sbjct: 147 VDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALC 206
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVM 268
RA Q+ AI ++ +EDFGL D ++ ++ + ++ A + M + + +
Sbjct: 207 RAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNV 266
Query: 269 TYNIVISGWSKLGQVVEMERVLKEI-VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
T N++++G+ K G++ E R ++E+ + EGF PD TF+ L+ GL + G + A+EV D
Sbjct: 267 TVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDM 326
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M +G PD YN++IS +G+ DE +K M +C PN TY +IS L K +
Sbjct: 327 MLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQ 386
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
V +A ++ + +GI+P T S ++ LC AM +YK+ + GC Y +
Sbjct: 387 VEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNM 446
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L+ L GK L+L EM+ SG + Y +I G C ++ A + ++ +G
Sbjct: 447 LIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQG 506
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ + Y+ L + L S ++E A L ++
Sbjct: 507 VSRNSVTYNTLIDGLCKSERVEEASQLMDQM 537
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 161/349 (46%), Gaps = 1/349 (0%)
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+EG PD T +++++ + G V A++++ + G D + N ++ LC+ V
Sbjct: 294 REGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVD 353
Query: 251 AASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A + N M + N +TYN +IS K QV E ++ + +G PD T++ LI
Sbjct: 354 EAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLI 413
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
+GL + A+E++ MK KGC PD YN +I + G E + K M C
Sbjct: 414 QGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCA 473
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
N+ TY LI G K++++A+A E+F++M +G+ ++ T + ++ LC A +
Sbjct: 474 RNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQL 533
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ G + Y LL G D+ M G D Y +IAGLC
Sbjct: 534 MDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCK 593
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G++E A ++ KG + Y+ + L + + A LFR++
Sbjct: 594 AGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREM 642
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 159/356 (44%), Gaps = 3/356 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D ++N++V L + V+ M +EG +PD+ T + ++ + G+V +A+++L
Sbjct: 300 DKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVL 359
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS-K 279
++ + + + N ++ LC+ V A+ L + GK +L +V TYN +I G
Sbjct: 360 NQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLS 419
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
V ME + KE+ +G PD T++ LI+ L G++ +A+ + M+ GC +
Sbjct: 420 RNHTVAME-LYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVIT 478
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YN +I + E + + M N TY LI GL KS +V +A ++ ++M+
Sbjct: 479 YNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMI 538
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
G+ P T S L C G A + + GC+ + Y L+ L G+
Sbjct: 539 MEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVE 598
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
L +Q G Y VI L + + AV + E + K P + Y
Sbjct: 599 AATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTY 654
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 159/351 (45%), Gaps = 2/351 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +YN ++ L + D VL+ M + +P+ T + ++ + + QV +A ++
Sbjct: 335 DIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLA 394
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
L G+ D + N ++ LC + A L+ MK K + TYN++I
Sbjct: 395 LVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFR 454
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ E +LKE+ G + + +T++ LI+G + RI +A E+FD M+ +G ++ Y
Sbjct: 455 GKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTY 514
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I +E + M P+ TY L++ K+ + A ++ + M
Sbjct: 515 NTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMAS 574
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G P T + + LC G AA + + + G L+ AY +++ L +
Sbjct: 575 DGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKE 634
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCN-IGQLENAVLVMEESLRKGFCP 510
+ L+ EM E D Y+ V GLC G + AV + E L +G+ P
Sbjct: 635 AVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVP 685
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 174/434 (40%), Gaps = 71/434 (16%)
Query: 145 AMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIV 204
A++ F WA K PN + ++ LG+ FD M ++L +M D ++L +
Sbjct: 71 AVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVF 130
Query: 205 MDSFIRAGQVYKAIQMLGRLE-DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++S+ G + +Q + +E +FG+ + N +L
Sbjct: 131 IESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLL----------------------- 167
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
N+++ G +KL ++VE+ +V+ G PD TF+ LI+ L RA +I AI
Sbjct: 168 -------NVLVDG-NKL-KLVEIAH--SNMVSRGIRPDVSTFNILIKALCRAHQIRPAIL 216
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE-------------- 369
+ + M++ G PD + ++ +I G+ D M+ + M C
Sbjct: 217 LMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFC 276
Query: 370 ----------------------PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
P+ T+ L++GL K+ V ALEV + ML G P
Sbjct: 277 KEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDI 336
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T S + LC G A+ + + + C + Y ++ L + L
Sbjct: 337 YTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALV 396
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
+ G D Y +I GLC A+ + +E KG P Y+ L + L K
Sbjct: 397 LTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGK 456
Query: 528 LESAYNLFRKIKIA 541
L+ A NL ++++++
Sbjct: 457 LQEALNLLKEMEVS 470
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 116/247 (46%), Gaps = 10/247 (4%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+++ +YN ++ L + + + ++ M EG+ PD T + ++ F +AG + KA
Sbjct: 507 VSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAA 566
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ + G + D + ++ LC+ V AA+ L +++ K + YN VI
Sbjct: 567 DIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQAL 626
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG-RIDDAIEVFDTMKEKGCGPD 336
+ + E R+ +E++ + +PD++T+ + GL + G I +A++ M E+G P+
Sbjct: 627 FRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPE 686
Query: 337 TNAYNAVISNYIS---VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
+++ + S VG + + + ++ D +I G LK K DAL
Sbjct: 687 FSSFYMLAEGLFSLAMVGTLIKLIDMVMEKAKFS-----DNEVTMIRGFLKISKYQDALA 741
Query: 394 VFEEMLD 400
+LD
Sbjct: 742 TLGGILD 748
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 221/481 (45%), Gaps = 12/481 (2%)
Query: 63 FQISS--HNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDAL 120
F IS +N F V R N V + + DEF E++ + +E AL
Sbjct: 31 FHISRVLNNDF--VESTERKNGVGLVCPEKHEDEFAGEVEKIYRILRNHHSRVPKLELAL 88
Query: 121 WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFD 180
+DL ++ +V++R +G FF WA K P + +V L + + F
Sbjct: 89 NESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFG 148
Query: 181 FMCNVLSDMAKEGVNPDL---ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLN 237
+ ++ +M K NP+L E ++M F A V KA+++L + +GL+ D
Sbjct: 149 AVWGLIEEMRK--TNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFG 206
Query: 238 VVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
+L LC+ V AS +F M+ K N+ + ++ GW + G+++E + VL ++ G
Sbjct: 207 CLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAG 266
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD-FDEC 356
PD + F+ L+ G AG++ DA ++ + M+++G P+ N Y +I DE
Sbjct: 267 LEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEA 326
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
M+ + M Y CE ++ TYT LISG K + V ++M +G++PS T +
Sbjct: 327 MRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVA 386
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
+ + +K ++ GC L Y +++R G+ + LW+EM+ +G
Sbjct: 387 HEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPG 446
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGF--CPSRLVYSKLSNKLLASNKLESAYNL 534
+ + +I G + G L A +E + +G P L N L+ +KLE A ++
Sbjct: 447 VDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDV 506
Query: 535 F 535
+
Sbjct: 507 W 507
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 212/425 (49%), Gaps = 2/425 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+ AL + +S ++V V+ R +G FF WA K + V++Y+ ++++L +
Sbjct: 9 LHTALDQNGIRVSPEIVEDVLRRFENAGMVAYRFFEWAEKQLHYTHSVRAYHTMIESLAK 68
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ + M ++++ M ++ + ++ET I+M + RA ++ +A+ +E + + + +
Sbjct: 69 IRQYQIMWDLINAMKRKRM-LNVETFCIIMRKYARAQKLEEAVYTFNVMEKYDVPPNLAA 127
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
N + LC+ +V A +F+S K + + + TY I++ GW K + + + +E+V
Sbjct: 128 FNGLFSALCKSKNVRKAQEIFDSSKDRFVPDSKTYTILLEGWGKTPNLPKAREIFREMVD 187
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
G SPD +T+ +++ L +AGR+D+A+++ M C P + Y+ +I Y ++
Sbjct: 188 VGCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENRIED 247
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+ + GM + ++ Y LI K K + V EM +G+ P++ T+ L
Sbjct: 248 AVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILN 307
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
L + G A ++++ KV C+ Y ++++ + M L +W M++ +
Sbjct: 308 NLIARGETDEAFRVFRRMIKV-CEPDADTYTMMIKMFCERNELEMALKVWKYMKKKHFVP 366
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ +I GLC G + +A +++E+ + KG PS + + +L + L+ + + L
Sbjct: 367 SMHTFSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFGRLRHLLIKEGREDVLEFLQ 426
Query: 536 RKIKI 540
+KI +
Sbjct: 427 QKINV 431
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 185/382 (48%), Gaps = 1/382 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D ++N ++ + ++M + G PD+ + S V++ ++G A+
Sbjct: 158 IQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMAL 217
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
Q+L ++E+ G K + + ++ LC+ V A L + M + + +V+TY+ ++ G+
Sbjct: 218 QLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGF 277
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
LG + E + E+V P+++TF+ L++GL + G + +A VF+ M +KG P+
Sbjct: 278 CSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNA 337
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YNA++ Y DE K M C P + +Y LI+G K R++ +A + E
Sbjct: 338 YTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVE 397
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M ++ + P T T ++ ++ LC G P A+ ++K+ G L Y LL L G
Sbjct: 398 MSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGH 457
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L L MQES D +Y +I G+ G+LE A + + G P+ Y+
Sbjct: 458 LDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTI 517
Query: 518 LSNKLLASNKLESAYNLFRKIK 539
+ LL + AY LFRK++
Sbjct: 518 MIKGLLKEGLSDEAYELFRKME 539
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 194/407 (47%), Gaps = 4/407 (0%)
Query: 135 VVNRGNLSGE--AMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKE 192
++N + GE V FN ++ + DV SY+ ++ L + +L M ++
Sbjct: 168 LINGRCIEGEIKEAVGLFNEMVRRGH-QPDVISYSTVINGLCKSGNTSMALQLLRKMEEK 226
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
G P+L + ++DS + V A+ +L + D G+ D + + +L C H+ A
Sbjct: 227 GCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEA 286
Query: 253 SSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
+ LFN M G+ V+ N +T+ I++ G K G V E V + + +G P++ T++ L++G
Sbjct: 287 TILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDG 346
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
++D+A +V D M +KGC P ++YN +I+ Y DE MS P+
Sbjct: 347 YCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPD 406
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
TY+ L+ GL + + +AL +F+EM G++P T ++ L+ LC +G A+ + K
Sbjct: 407 TVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLK 466
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
++ + + Y +L+ + GK + +L+ ++ G Y +I GL G
Sbjct: 467 SMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEG 526
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ A + + GF P+ Y+ + L + +A L ++
Sbjct: 527 LSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEM 573
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 182/384 (47%), Gaps = 3/384 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N V + + ++ ++K + + ++ + M GV ++ +L+I+++ R V A
Sbjct: 87 NPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFA 146
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVIS 275
I +LG++ G++ DA + N ++ C + A LFN M +G +V++Y+ VI+
Sbjct: 147 ISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQP-DVISYSTVIN 205
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G K G ++L+++ +G P+ + ++ +I+ L + ++DA+++ M ++G P
Sbjct: 206 GLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPP 265
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D Y+ ++ + S+G +E + M N PN T+T L+ GL K V++A VF
Sbjct: 266 DVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVF 325
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
E M +G P+ T + ++ C A + GC + +Y +L+
Sbjct: 326 EAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKR 385
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
+ L EM E D Y ++ GLC +G+ + A+ + +E G P + Y
Sbjct: 386 RRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTY 445
Query: 516 SKLSNKLLASNKLESAYNLFRKIK 539
S L + L L+ A L + ++
Sbjct: 446 STLLDGLCKHGHLDEALKLLKSMQ 469
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 177/390 (45%), Gaps = 30/390 (7%)
Query: 106 FLQKLKGKG----------VIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIK 155
L+K++ KG +I+ + V+ ++D++ ++V+RG
Sbjct: 219 LLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRG---------------- 262
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
+ DV +Y+ I+ + + ++M V P+ T +I++D + G V
Sbjct: 263 ---IPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVS 319
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM-TYNIVI 274
+A + + G + +A + N ++ C + A + + M K V+ +YNI+I
Sbjct: 320 EARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILI 379
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G+ K ++ E + +L E+ + +PD++T+S L++GL + GR +A+ +F M G
Sbjct: 380 NGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLL 439
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD Y+ ++ G DE +K K M EP++ Y LI G+ + K+ A E+
Sbjct: 440 PDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKEL 499
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F ++ GI P+ T T ++ L G A +++K G + +Y ++++
Sbjct: 500 FSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQ 559
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
+ L EM + +D ++ ++
Sbjct: 560 NQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 120/252 (47%), Gaps = 1/252 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ D VL M +G P + + +I+++ + + ++ +A +L +
Sbjct: 339 TYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEM 398
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ L D + + ++ LCQ A +LF M +L ++MTY+ ++ G K G +
Sbjct: 399 SEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHL 458
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E ++LK + PD + ++ LIEG+ AG+++ A E+F + G P Y +
Sbjct: 459 DEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIM 518
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I + G DE + ++ M PN +Y +I G L+++ + A+ + +EM+ +
Sbjct: 519 IKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRF 578
Query: 404 VPSTGTITSFLE 415
+ T L+
Sbjct: 579 SADSSTFQMLLD 590
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 105/267 (39%), Gaps = 37/267 (13%)
Query: 318 IDDAIEVFDTMKEKGCGPDT-------------NAYNAVIS------------NYISVGD 352
IDDA+ F M P Y+ V+S N S+
Sbjct: 73 IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132
Query: 353 FDECM----------KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
C+ M +P+ T+ LI+G ++ +A+ +F EM+ RG
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P + ++ + LC G A+ + +K + GCK +L AY ++ L +
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
DL EM + G P D Y ++ G C++G L A ++ E + + P+ + ++ L + L
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312
Query: 523 LASNKLESAYNLFRKI--KIARQNDYA 547
+ A +F + K A N Y
Sbjct: 313 CKEGMVSEARCVFEAMTKKGAEPNAYT 339
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 62/155 (40%)
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
S + DAL F ML PS FL + + + + G ++ +
Sbjct: 70 SISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYS 129
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
+L+ L + + +M + G D + +I G C G+++ AV + E +
Sbjct: 130 LNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMV 189
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
R+G P + YS + N L S A L RK++
Sbjct: 190 RRGHQPDVISYSTVINGLCKSGNTSMALQLLRKME 224
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 208/425 (48%), Gaps = 5/425 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+ +L + + + ++V KV+ R G + FF HP+ A S++ + GR
Sbjct: 65 LRGSLHGLQLQFTPELVDKVLKRLWFHGPKALQFFKHLEYHPSYAHSASSFDHAIDIAGR 124
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ + + +++ M + P +T +I+ + F+ AG+ +AI++ + + G D S
Sbjct: 125 MRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQDLHS 184
Query: 236 LNVVLWCLCQRLHVGAA-SSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
N +L LC+ V A ++LF ++GK +V++YNI+ +GW + + + VLKE+V
Sbjct: 185 FNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEVLKEMV 244
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
G +P T++ L++G RAG++ +A E F MKE+ D Y ++ + VG+
Sbjct: 245 ERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIK 304
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
K + M P+ TY +I L K V +A+ +FEEM+ +G VP+ T +
Sbjct: 305 RARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVI 364
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
L G AM ++ + GC+ ++ Y + +R G L ++ +M + P
Sbjct: 365 RGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKMGQGSLP 424
Query: 475 SDGEIYEYVIAGLCNIGQLENAVL---VMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
+ + Y +I+ + + E+ V+ ++ E + +GF P + ++++ N LL + A
Sbjct: 425 -NLDTYNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRVLNGLLLTGNQAFA 483
Query: 532 YNLFR 536
+ R
Sbjct: 484 KEILR 488
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 117/250 (46%), Gaps = 10/250 (4%)
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI-----SNYIS 349
A P S TF+ + E AG+ D AI+VF +M+E GC D +++N ++ S +
Sbjct: 140 ARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDILCKSKRVE 199
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
+ ++ K +G + ++ +Y + +G ++ ALEV +EM++RG+ P+ T
Sbjct: 200 MA-YNNLFKVLRG----KFKADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTITT 254
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
L+ G A + + ++ ++ + Y ++ G+ +++EM
Sbjct: 255 YNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMV 314
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
G Y +I LC +ENAVL+ EE ++KG+ P+ Y+ + L + ++
Sbjct: 315 GEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMD 374
Query: 530 SAYNLFRKIK 539
A ++K
Sbjct: 375 KAMEFIERMK 384
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 3/174 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN +++ L ++ + + +M K+G P+L T ++V+ AG + KA++ + R+
Sbjct: 324 TYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERM 383
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGW---SKLG 281
+ G + + ++ NV + C V S+F M L N+ TYN++IS K
Sbjct: 384 KTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKMGQGSLPNLDTYNVLISAMFVRKKSE 443
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
+V ++L E+V GF P TF+ ++ GL G A E+ + G P
Sbjct: 444 DLVVAGKLLLEMVDRGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKCGRLP 497
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 2/161 (1%)
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I+G ++ K AL M R I PS+ T E + G P A+ ++ R+ GC
Sbjct: 121 IAGRMRDYKTVWAL--VARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGC 178
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
L ++ +L L + M + ++ + +D Y + G C I + A+
Sbjct: 179 PQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALE 238
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
V++E + +G P+ Y+ L + +L+ A+ F ++K
Sbjct: 239 VLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMK 279
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 190/406 (46%), Gaps = 9/406 (2%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
R L +A+ L N + D YN ++ L + V S+M + G+ PD
Sbjct: 125 RQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPD 184
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ T + +M + RA QV A+ ML + G+ D + ++ + + AA +
Sbjct: 185 VVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRV-- 242
Query: 258 SMKGKVL-----FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
K ++L +T N++I+G+ KLG+V + +++ +A GF PD +T++ + GL
Sbjct: 243 --KARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGL 300
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
+ G + A++V D M ++G PD YN V++ G +E M C P++
Sbjct: 301 CQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDI 360
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
T+ LI L ++ +AL++ ++ +G+ P T + LC G P A+ ++++
Sbjct: 361 TTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEE 420
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+ GC Y L+ L GK G LDL EM+ +G P Y +I GLC +
Sbjct: 421 MKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMR 480
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+E A V ++ +G + + ++ L + L +++ A L ++
Sbjct: 481 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQM 526
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 187/451 (41%), Gaps = 71/451 (15%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV ++N ++KAL R +L +M+ GV PD T + +M F+ G + A+
Sbjct: 181 IKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAAL 240
Query: 219 QM-------------------------LGRLEDF----------GLKFDAESLNVVLWCL 243
++ LGR+ED G + D + N + L
Sbjct: 241 RVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGL 300
Query: 244 CQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA------- 295
CQ HVG A + + M + +V TYNIV++ K GQ+ E + +L ++V
Sbjct: 301 CQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDI 360
Query: 296 ----------------------------EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+G SPD TF+ LI L + G A+ +F+
Sbjct: 361 TTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEE 420
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
MK GC PD YN +I N S+G + + K M S C + TY +I GL K +
Sbjct: 421 MKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMR 480
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A EVF++M +GI + T + ++ LC A + + G + + Y
Sbjct: 481 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNS 540
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
+L G D+ M +G+ D Y +I GLC G+ + A+ ++ KG
Sbjct: 541 ILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 600
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y+ + L N A NLFR++
Sbjct: 601 MRATPKAYNPVIQSLFRRNNTRDAMNLFREM 631
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 172/399 (43%), Gaps = 37/399 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN V L + V+ M +EG +PD+ T +IV++ + GQ+ +A +L
Sbjct: 289 DQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL 348
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
++ + G D + N ++ LC + A L + K L +V T+NI+I+ K+
Sbjct: 349 NQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKV 408
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G R+ +E+ + G +PD +T++ LI+ L G++ A+++ M+ GC T Y
Sbjct: 409 GDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTY 468
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I +E + + M N T+ LI GL K +++ DA ++ +M+
Sbjct: 469 NTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMIS 528
Query: 401 RGIVPSTGTITSFL-----------------------------------EPLCSYGPPHA 425
G+ P+ T S L LC G
Sbjct: 529 EGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQV 588
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ + + R G + + AY +++ L ++L+ EM E G P D Y+ V
Sbjct: 589 ALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFR 648
Query: 486 GLC-NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
GLC G + A + E + KGF P + L+ LL
Sbjct: 649 GLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLL 687
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 186/402 (46%), Gaps = 4/402 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFF-DFMCNVLSDMAKEGVNPDLETLS 202
+A + N A+ + A + Y I++ LG D M ++++M +EG + +
Sbjct: 58 DAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMRREGHQVRVGVVH 117
Query: 203 IVMDSFIRAGQVYKAIQM-LGRLED-FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
++S+ R A+ + L +L+ FG++ D N +L L + + ++++ M
Sbjct: 118 SFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMG 177
Query: 261 GK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
+ + +V+T+N ++ + QV +L+E+ + G +PD TF+ L++G G I
Sbjct: 178 ERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIK 237
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
A+ V M E GC P N +I+ Y +G ++ + Y + + EP+ TY +
Sbjct: 238 AALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFV 297
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
+GL ++ V AL+V + M+ G P T + LC G A + + + GC
Sbjct: 298 NGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCL 357
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+T + L+ L + LDL ++ G D + +I LC +G + A+ +
Sbjct: 358 PDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRL 417
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
EE G P + Y+ L + L + KL A +L ++++ A
Sbjct: 418 FEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESA 459
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 140/320 (43%), Gaps = 39/320 (12%)
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
GN EA+ L +K ++ DV ++N+++ AL + + +M G PD
Sbjct: 373 GNRLEEALDLARQVTLK--GLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDE 430
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
T + ++D+ G++ KA+ +L +E G + N ++ LC+++ + A +F+
Sbjct: 431 VTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQ 490
Query: 259 M------KGKVLFNVM------------------------------TYNIVISGWSKLGQ 282
M + + FN + TYN +++ + K G
Sbjct: 491 MDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGD 550
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ + +L+ + A GF D +T+ LI GL +AGR A+++ M+ KG AYN
Sbjct: 551 IKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNP 610
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR-KVADALEVFEEMLDR 401
VI + + + M ++ M+ P+ TY + GL + + +A + EM+D+
Sbjct: 611 VIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDK 670
Query: 402 GIVPSTGTITSFLEPLCSYG 421
G +P + E L + G
Sbjct: 671 GFIPEFSSFRMLAEGLLNLG 690
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ ++ ++L M G D+ T +++ +AG+ A+++L +
Sbjct: 537 TYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGM 596
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLG- 281
G++ ++ N V+ L +R + A +LF M G+ + TY IV G + G
Sbjct: 597 RIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPP-DAFTYKIVFRGLCRGGG 655
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ E L E+V +GF P+ +F L EGL G D I + + EK D++
Sbjct: 656 SIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIIEKADLGDSDV-- 713
Query: 342 AVISNYISVGDFDECMKYYKGMSSY 366
+ I Y+ + K+Y ++++
Sbjct: 714 SAIRGYLKI------RKFYDALATF 732
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 71/189 (37%), Gaps = 29/189 (15%)
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDR---------------------GIVPST 407
+P+ D R+++ L A EV+EE++ + G
Sbjct: 54 QPDPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMRREGHQVRV 113
Query: 408 GTITSFLEPLCSYGPPH-----AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
G + SFLE SY +++ + G + Y LL L K +L
Sbjct: 114 GVVHSFLE---SYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLE 170
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
++ EM E G D + ++ LC Q+ AVL++EE G P ++ L
Sbjct: 171 TVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGF 230
Query: 523 LASNKLESA 531
+ +++A
Sbjct: 231 VEEGSIKAA 239
>gi|413945076|gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays]
gi|413945077|gb|AFW77726.1| ATP binding protein isoform 2 [Zea mays]
gi|413945078|gb|AFW77727.1| ATP binding protein isoform 3 [Zea mays]
Length = 634
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 201/431 (46%), Gaps = 2/431 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E AL ++ L VV V++R + FF WA +Y ++ LG+
Sbjct: 181 LEAALSALSPPLCEAVVLAVLHRFKHAHRPSYRFFRWATVSGGFTHTTITYCKMLHILGK 240
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ F+ M ++ +M K G ++ + + SF AG++ A+ + + G ES
Sbjct: 241 TRQFESMVAMIQEMGKAGAL-SMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVES 299
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
N +L L + A +F+ M G+ ++ +Y ++ W +VE RV E++
Sbjct: 300 FNCLLVALAKEGLGREARQVFDKMHGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLE 359
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+G PD + + +IEGL R R +A+++F+ MK KG P+ Y +I ++ G D
Sbjct: 360 KGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDM 419
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
M+ ++ M C+P++ TYT L+ G ++++ V EEM +G P T + ++
Sbjct: 420 AMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIK 479
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR-LSGFGKCGMLLDLWHEMQESGYP 474
L + P A +YKK K G + ++ Y ++++ G M +W EM + G
Sbjct: 480 LLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQRGIC 539
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
D Y I G G+ E A +EE + KG ++ Y+K + + K + + L
Sbjct: 540 PDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKFAADFSKAGKPDILFEL 599
Query: 535 FRKIKIARQND 545
+K+K A + D
Sbjct: 600 AQKVKFAGKLD 610
>gi|242087579|ref|XP_002439622.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
gi|241944907|gb|EES18052.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
Length = 657
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 199/431 (46%), Gaps = 2/431 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E AL ++ L VV V++R + FF WA +Y ++ LG+
Sbjct: 183 LEAALSALSPPLCEAVVLAVLHRFKHAHRPSYRFFRWATASGGFTHTTITYCKMLHILGK 242
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ F+ M ++ +M K G ++ + + SF AG++ A+ + ++ G ES
Sbjct: 243 TRQFEMMVAIIQEMGKVGAL-SMDAFKVAIKSFAAAGEIKNAVGVFELMKKNGFDDGVES 301
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
N +L L A +F+ M G+ ++ +Y ++ W +VE RV E++
Sbjct: 302 FNCLLVALANEGLGREARQVFDKMHGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLE 361
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+G PD + + +IEGL R R +A+++F+ MK KG P+ Y +I ++ G D
Sbjct: 362 KGMKPDVVVHNTMIEGLLRGQRRPEALKMFELMKAKGPPPNVWTYTMLIRDHCKRGKMDM 421
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
M+ ++ M C+P++ TYT L+ G ++++ V EEM +G P T + ++
Sbjct: 422 AMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIK 481
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR-LSGFGKCGMLLDLWHEMQESGYP 474
L + P A +YKK K G + ++ Y ++++ G M +W EM G
Sbjct: 482 LLTNRKMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRGIC 541
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
D Y I G G+ E A +EE + KG ++ Y+K + + K + Y L
Sbjct: 542 PDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMTAPQIDYNKFAADFSKAGKPDILYEL 601
Query: 535 FRKIKIARQND 545
K+K A + D
Sbjct: 602 ALKVKFAGKCD 612
>gi|356495784|ref|XP_003516753.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 558
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 198/411 (48%)
Query: 119 ALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKF 178
AL ++ S +V +V+NR + + FF WA + YN++V LG+ +
Sbjct: 117 ALDGLSFQPSSGLVSQVLNRFSNDWVPALGFFKWAKSLTGYRHSPELYNLMVDILGKCRS 176
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNV 238
FD M ++ +MA+ LET++ VM RA + AI+ GR+E FG+K D +LNV
Sbjct: 177 FDSMSELVEEMARLEGYVTLETMTKVMRRLARARKHEDAIEAFGRMEKFGVKKDTAALNV 236
Query: 239 VLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
++ L + V A + KG + + ++N+++ GW + + ++++ GF
Sbjct: 237 LIDALVKGDSVEHAHKVVLEFKGSIPLSSRSFNVLMHGWCRARDFDNARKAMEDMKEHGF 296
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
PD +++ IE G +V + M+E GC P+ Y +V+ + G + ++
Sbjct: 297 EPDVFSYTNFIEAYGHERDFRKVDQVLEEMRENGCPPNAVTYTSVMLHLGKAGQLRKALE 356
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
Y+ M S C + Y+ +I L K+ ++ DA +VFE+M +G+V T S + C
Sbjct: 357 VYEKMKSDGCVADTPFYSSMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNSMISTAC 416
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
++ A+ + K+ CK ++ Y LL+ + +L L M ++ D
Sbjct: 417 AHSREETALRLLKEMEDGSCKPNVGTYHRLLKMCCKKKRMKVLKFLLDHMFKNNISPDLA 476
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
Y ++ L G++E+A +EE + +GF P KL+ +L + + LE
Sbjct: 477 TYSLLVNALRKSGKVEDAYSFLEEMVLRGFTPKPSTLKKLAGELESKSMLE 527
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 103/250 (41%), Gaps = 36/250 (14%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K DV SY ++A G + F + VL +M + G P+ T + VM +AGQ
Sbjct: 291 MKEHGFEPDVFSYTNFIEAYGHERDFRKVDQVLEEMRENGCPPNAVTYTSVMLHLGKAGQ 350
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
+ KA+++ +++ G D + +++ L + + A +F M K V+ +V+TYN
Sbjct: 351 LRKALEVYEKMKSDGCVADTPFYSSMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNS 410
Query: 273 VISGWSKLGQVVEMERVLKEI-----------------------------------VAEG 297
+IS + R+LKE+
Sbjct: 411 MISTACAHSREETALRLLKEMEDGSCKPNVGTYHRLLKMCCKKKRMKVLKFLLDHMFKNN 470
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
SPD T+S L+ L ++G+++DA + M +G P + + S +E +
Sbjct: 471 ISPDLATYSLLVNALRKSGKVEDAYSFLEEMVLRGFTPKPSTLKKLAGELESKSMLEEKV 530
Query: 358 KYYKGMSSYN 367
+ + M ++
Sbjct: 531 RVEEWMDRFS 540
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 84/206 (40%), Gaps = 13/206 (6%)
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YN ++ FD + + M+ ++T T+++ L ++RK DA+E F M
Sbjct: 164 YNLMVDILGKCRSFDSMSELVEEMARLEGYVTLETMTKVMRRLARARKHEDAIEAFGRME 223
Query: 400 DRGIVPSTGTITSFLEPLC---SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR---RLS 453
G+ T + ++ L S H ++ +K + LS ++ +L+ R
Sbjct: 224 KFGVKKDTAALNVLIDALVKGDSVEHAHKVVLEFKGS----IPLSSRSFNVLMHGWCRAR 279
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
F ++ +M+E G+ D Y I + V+EE G P+ +
Sbjct: 280 DFDNARKAME---DMKEHGFEPDVFSYTNFIEAYGHERDFRKVDQVLEEMRENGCPPNAV 336
Query: 514 VYSKLSNKLLASNKLESAYNLFRKIK 539
Y+ + L + +L A ++ K+K
Sbjct: 337 TYTSVMLHLGKAGQLRKALEVYEKMK 362
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 186/381 (48%), Gaps = 3/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D + YNV + L + + + S M + V PD+ T +I++ + +A Q+ AI
Sbjct: 160 VKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAI 219
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
ML + ++GL+ D ++ ++ + V A + M + ++ N++++G
Sbjct: 220 LMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGL 279
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G++ E R + E EGF PD +TF+ L+ GL R G I +E+ D M EKG D
Sbjct: 280 CKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDV 337
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN++IS +G+ DE ++ M S +CEPN TY LI L K V A E+
Sbjct: 338 YTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARV 397
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ +G++P T S ++ LC AM ++++ ++ GC Y +L+ L +
Sbjct: 398 LTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERR 457
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L L EM+ SG + +Y +I GLC ++ +A + ++ G S + Y+
Sbjct: 458 LKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNT 517
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L N L S ++E A L ++
Sbjct: 518 LINGLCKSKRVEEAAQLMDQM 538
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 184/449 (40%), Gaps = 69/449 (15%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V DV ++N++++AL + +L DM G+ PD +T + +M FI V A+
Sbjct: 195 VPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGAL 254
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG----KVLFN-------- 266
++ + + G + + S+NV++ LC+ + A +G +V FN
Sbjct: 255 RIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFCPDQVTFNALVNGLCR 314
Query: 267 ----------------------VMTYNIVISGWSKLGQVVEMERVLKEIVA--------- 295
V TYN +ISG KLG++ E +L +V+
Sbjct: 315 TGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVT 374
Query: 296 --------------------------EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
+G PD TF+ LI+GL + A+E+F+ MK
Sbjct: 375 YNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMK 434
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
EKGC PD Y+ +I + S E + K M C N+ Y LI GL K+ +V
Sbjct: 435 EKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVG 494
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
DA ++F++M G+ S+ T + + LC A + + G K Y +L
Sbjct: 495 DAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTML 554
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
+ G D+ M +G D Y +I GLC G+++ A ++ KG
Sbjct: 555 KYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMV 614
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y+ + L + + A LFR++
Sbjct: 615 LTPQAYNPVIQALCKRKRTKEAMRLFREM 643
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 172/396 (43%), Gaps = 5/396 (1%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F WA PN + ++ +++ L R FD M +L M + D T I ++++
Sbjct: 78 LFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETY 137
Query: 209 IRAGQVYKAIQMLGRL--EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLF 265
+ ++ I L L DF +K D NV L L + + +L + M V
Sbjct: 138 ATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPP 197
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V T+NI+I K Q+ +L+++ G PD TF+ L++G ++ A+ +
Sbjct: 198 DVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIK 257
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ M E GC + + N +++ G +E +++ + C P+ T+ L++GL ++
Sbjct: 258 ELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGF-C-PDQVTFNALVNGLCRT 315
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+ LE+ + ML++G T S + LC G A+ + C+ + Y
Sbjct: 316 GHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTY 375
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ L +L + G D + +I GLC E A+ + EE
Sbjct: 376 NTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKE 435
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
KG P YS L L + +L+ A L ++++++
Sbjct: 436 KGCDPDEFTYSILIESLCSERRLKEALMLLKEMELS 471
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 166/359 (46%), Gaps = 9/359 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D ++N +V L R ++ M ++G D+ T + ++ + G++ +A+++L
Sbjct: 301 DQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEIL 360
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS-K 279
+ + + + N ++ LC+ HV AA+ L + K VL +V T+N +I G
Sbjct: 361 HHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLT 420
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
+ + ME + +E+ +G PD T+S LIE L R+ +A+ + M+ GC +
Sbjct: 421 SNREIAME-LFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVV 479
Query: 340 YNAVISNYIS---VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN +I VGD ++ + M + TY LI+GL KS++V +A ++ +
Sbjct: 480 YNTLIDGLCKNNRVGDAED---IFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMD 536
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+M+ G+ P T T+ L+ C G A + + GC+ + Y L+ L G
Sbjct: 537 QMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAG 596
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
+ + L +Q G + Y VI LC + + A+ + E + KG P + Y
Sbjct: 597 RVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITY 655
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 167/360 (46%), Gaps = 6/360 (1%)
Query: 154 IKHPNVAKDVK----SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
I H V++D + +YN ++ L + + + + +GV PD+ T + ++
Sbjct: 359 ILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLC 418
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVM 268
A+++ +++ G D + ++++ LC + A L M+ NV+
Sbjct: 419 LTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVV 478
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
YN +I G K +V + E + ++ G S S+T++ LI GL ++ R+++A ++ D M
Sbjct: 479 VYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQM 538
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+G PD Y ++ + GD + M+ CEP++ TY LI GL K+ +V
Sbjct: 539 IMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRV 598
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A ++ + +G+V + ++ LC AM ++++ + G + YK++
Sbjct: 599 DVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIV 658
Query: 449 LRRL-SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
R L +G G +D EM E G + + ++ GLC++ + + ++ + KG
Sbjct: 659 FRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKG 718
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 16/251 (6%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V++ +YN ++ L + K + ++ M EG+ PD T + ++ F + G + +A
Sbjct: 508 VSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAA 567
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS--MKGKVLFNVMTYNIVISG 276
++ + G + D + ++ LC+ V AS L S MKG VL YN VI
Sbjct: 568 DIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVL-TPQAYNPVIQA 626
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG-RIDDAIEVFDTMKEKGCGP 335
K + E R+ +E++ +G PD +T+ + GL G I +A++ M EKG P
Sbjct: 627 LCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILP 686
Query: 336 DTNAYNAVISNYISVGDFDECMKYY-----KGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
+ ++ + S+ D ++ KG S + T +I G LK +K D
Sbjct: 687 EFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFS-------QSETSIIRGFLKIQKFND 739
Query: 391 ALEVFEEMLDR 401
AL +LDR
Sbjct: 740 ALANLGAILDR 750
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 209/443 (47%), Gaps = 9/443 (2%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E AL V + + +V+NR +G FF WA K P + Y ++K LG+
Sbjct: 75 LELALQESGVAVRSGLTERVLNRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKILGK 134
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLET---LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
+ F + ++ +M +E NP + ++M F A V KAI++L + +G + D
Sbjct: 135 MRQFGAVWALIEEMRRE--NPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPKYGCEPD 192
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
+L LC+ V A+SLF M+ + + + ++ GW + G+++E + VL +
Sbjct: 193 EHVFGCLLDALCKNGSVKEAASLFEDMRIRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQ 252
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
I GF PD + ++ L+ G AG++ DA ++ M+ K C P+ ++ +I +
Sbjct: 253 IREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKK 312
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
+E M+ + M S C + TYT LISG K K++ E+ + M+ +G +P+ T
Sbjct: 313 MEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLH 372
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
+ + + ++ RK+GC L Y +++R G+ + +W+EM+ +G
Sbjct: 373 IMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATG 432
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF--CPSRLVYSKLSNKLLASNKLES 530
+ + +I G + L A +E + +G P +L N LL + KLE
Sbjct: 433 LSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEM 492
Query: 531 AYNLFRKI--KIARQNDYARRLW 551
+ +++ I K N YA +W
Sbjct: 493 SKDVWSCIMTKGCDLNVYAWTIW 515
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 143/348 (41%), Gaps = 13/348 (3%)
Query: 107 LQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSY 166
L +++ G D + N+ GK+V+ +L E ++ +V S+
Sbjct: 250 LVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKE---------MRRKECEPNVMSF 300
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
+++AL +K + V +M G D T + ++ F + G++ K ++L +
Sbjct: 301 TTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQ 360
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVE 285
G + + ++ ++ + L M K ++ YNIVI KLG++ E
Sbjct: 361 QGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKE 420
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG--CGPDTNAYNAV 343
RV E+ A G SP TF +I G + +A E F M +G P +
Sbjct: 421 GVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKEL 480
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+++ + + + + + C+ N+ +T I L + V +A +M+D G+
Sbjct: 481 LNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGV 540
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+P T + L A + +K RK+ + +T +K+ RR
Sbjct: 541 MPQPDTFAKLMRGLRKLYNRQIAAEITEKVRKMAAEREMT-FKMYKRR 587
>gi|115463377|ref|NP_001055288.1| Os05g0355200 [Oryza sativa Japonica Group]
gi|55168028|gb|AAV43896.1| unknown protein [Oryza sativa Japonica Group]
gi|55168069|gb|AAV43937.1| unknown protein [Oryza sativa Japonica Group]
gi|113578839|dbj|BAF17202.1| Os05g0355200 [Oryza sativa Japonica Group]
Length = 632
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 204/435 (46%), Gaps = 6/435 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHP----NVAKDVKSYNVIVK 171
+E AL ++ LS +V V++R + FF WA A +Y +V
Sbjct: 170 LEAALTALSPPLSETLVLAVLDRFKHAHRPSHRFFRWAAAAAAASGGFAHTTITYCKMVH 229
Query: 172 ALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF 231
LG+ + F M ++ +M KEG ++ I + SF AG++ A+ + + G
Sbjct: 230 ILGKARQFQSMVALIQEMGKEGAL-CMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDD 288
Query: 232 DAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLK 291
ES N +L L Q A+ +F+ M+ + ++ +Y ++ W +VE RV
Sbjct: 289 GVESFNCLLVALAQEGLGREANQVFDRMRDRYAPDLRSYTALMLAWCNARNLVEAGRVWN 348
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
E++ G PD + + +IEGL R R +A+++F+ MK KG P+ Y +I ++ G
Sbjct: 349 EMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRG 408
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
D M+ ++ M C+P++ TYT L+ G ++++ + EEM +G P T
Sbjct: 409 KMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYN 468
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML-LDLWHEMQE 470
+ ++ L + P A +YKK K G + ++ Y ++++ G+ M+ +W EM
Sbjct: 469 ALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHR 528
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G D Y I G G+ E A +EE ++KG ++ Y+K + + K +
Sbjct: 529 KGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFSKAGKPDI 588
Query: 531 AYNLFRKIKIARQND 545
Y L +K+K + D
Sbjct: 589 LYELAQKVKFTGKFD 603
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 212/433 (48%), Gaps = 3/433 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
I AL + V++S ++V +V+ + +G + FF WA + +S++ +++ALG+
Sbjct: 114 IASALDALGVNMSPELVAEVLRNLSNAGILALAFFRWAERQQGFRYTAESFHNLIEALGK 173
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
K F + +++ M G+ +T +++ + RA +V +A++ ++ FGLK D
Sbjct: 174 IKQFRLVWSLVEAMRCRGLLSK-DTFRLIVRRYARARKVKEAVETFEKMSSFGLKADLSD 232
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
N ++ L + V A ++F MK G+ + ++ TY +++ GW ++ ++ V +E+
Sbjct: 233 YNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEM 292
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+ G PD + + LI ++G+ D+AI+VF M+ GC P + Y +I+ S
Sbjct: 293 LDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLINGLGSEERL 352
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
DE +KY++ + + T ++ +S K A ++ +EM GI P+ T
Sbjct: 353 DEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGPNARTYDII 412
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
L+ L A ++++ GC+ L Y +++ + M L +W +M+E G
Sbjct: 413 LQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVDMALKVWKQMKEKGV 472
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
++ +I GLC +LE A + +E L KG P ++S L L+ ++ A +
Sbjct: 473 LPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALIEGGRISLAQD 532
Query: 534 LFRKIKIARQNDY 546
+ K+ R+ +
Sbjct: 533 MALKLDTLRKTPF 545
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 209/426 (49%), Gaps = 4/426 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
++ AL V +S +V V+ + +G FF WA K + VK+++ ++ +L +
Sbjct: 9 LDTALDQSGVRVSEQIVEDVLKKFENAGMVAYRFFEWAEKQRHYNHSVKAFHTVIDSLAK 68
Query: 176 RKFFDFMCNVLSDM-AKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
+ + M +V+ M +K VN +ET I+M + RA +V +A+ ++ + + +
Sbjct: 69 IRQYQLMWDVVKVMKSKRMVN--VETFCIIMRKYARAQKVEEAVYTFNIMDKYDVPPNLA 126
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
+ N +L LC+ +V A +F+S+K + + + TY+I++ GW K + + + +E+V
Sbjct: 127 AFNGLLSALCKSKNVRKAQEIFDSIKDRFVPDSKTYSILLEGWGKDPNLPKAREIFREMV 186
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
+ G PD +T+ +++ L +AGR+D+A+ + + M C P Y+ ++ Y +
Sbjct: 187 SNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIE 246
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ + + M + EP++ Y LI K+ ++ + V EM +G+ P++ T L
Sbjct: 247 DAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIIL 306
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
L G A ++ + KV C+ Y ++++ + L +W M+ +
Sbjct: 307 SSLIGRGETDEAYRVFLRMIKV-CEPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFM 365
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
++ +I GLC G + A +++EE + KG PS + + +L L+ + + L
Sbjct: 366 PSMHTFQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVTFGRLRQLLIKEGREDVLKFL 425
Query: 535 FRKIKI 540
+KI +
Sbjct: 426 QKKINV 431
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 187/357 (52%), Gaps = 6/357 (1%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
++ M + G PDL T V++ + G + A+ +L ++E +K + N ++ LC
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ HV A LF M+ K + NV+TYN +I+ G+ + R+L ++ + +P+ +
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
TF+ LI+ + G++ +A ++ + M ++ PDT YN +I+ + DE + +K M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
S +C PN+ TY LI+G K ++V D +E+F EM RG+V +T T T+ ++ G
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
+A M++K+ + Y +LL L +GK L ++ +Q+S + IY +
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509
Query: 484 IAGLCNIGQLENA-VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I G+C G++ A L S++ P + Y+ + + L + L+ A +LFRK+K
Sbjct: 510 IEGMCKAGKVGEAWDLFCSLSIK----PDVVTYNTMISGLCSKRLLQEADDLFRKMK 562
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 177/358 (49%), Gaps = 4/358 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y +V L +R D N+L+ M + ++ + ++DS + V A+ +
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+E G++ + + N ++ CLC AS L ++M + K+ NV+T+N +I + K
Sbjct: 282 TEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKE 341
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++VE E++ +E++ PD++T++ LI G R+D+A ++F M K C P+ Y
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY 401
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I+ + ++ ++ ++ MS N TYT +I G ++ A VF++M+
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS 461
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+ T + L LCSYG A++++K +K +L++ Y ++ + GK G
Sbjct: 462 NRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
DL+ + D Y +I+GLC+ L+ A + + G P+ Y+ L
Sbjct: 522 AWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTL 576
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 184/399 (46%), Gaps = 31/399 (7%)
Query: 124 NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAI------KHPNVAKD-------------VK 164
++DL+L+++ K+ +A V+ FN I +H VA D V
Sbjct: 238 DIDLALNLLNKM---EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ L + +LS+M ++ +NP++ T + ++D+F + G++ +A ++ +
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
+ D + N+++ C + A +F M K L N+ TYN +I+G+ K +V
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ + +E+ G +++T++ +I+G +AG D A VF M D Y+ +
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ S G D + +K + E N+ Y +I G+ K+ KV +A ++F + I
Sbjct: 475 LHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SI 531
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC--GML 461
P T + + LCS A +++K ++ G + Y L+R + C
Sbjct: 532 KPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR--ANLRDCDRAAS 589
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+L EM+ SG+ D ++ + + G+L+ + L M
Sbjct: 590 AELIKEMRSSGFVGDASTIS-LVTNMLHDGRLDKSFLNM 627
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 121/271 (44%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
++ TY+I I+ + + Q+ VL +++ G+ PD +T S L+ G + RI DA+ +
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M E G PDT + +I E + M C+P++ TY +++GL K
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+ AL + +M I + + ++ LC Y A+ ++ + G + ++ Y
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ L +G+ L M E + + +I G+L A + EE ++
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
+ P + Y+ L N N+L+ A +F+
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 115/263 (43%), Gaps = 46/263 (17%)
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISN---------YISVGDFDECMKYYKGMSSY- 366
++DDA+++F M + P +N ++S IS+G+ + + + +Y
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 367 ---NC----------------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
NC EP++ T + L++G S++++DA+ + ++M++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G P T T T+ + L + A+ + + + GC+ L Y ++ L G +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+L ++M+ + ++ I+ +I LC +E AV + E KG P+ + Y+ L N
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 522 L-----------LASNKLESAYN 533
L L SN LE N
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKIN 325
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 188/382 (49%), Gaps = 3/382 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D + YNV++ L + + S M + + D+ T +I++ + +A QV AI
Sbjct: 164 IKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAI 223
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
M+ + +GL D + ++ + ++ A + M G +V T N++I+G
Sbjct: 224 LMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDV-TVNVLING 282
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K G++ + ++E V+EGF PD T++ L+ GL + G A+EV D M G PD
Sbjct: 283 FCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPD 342
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN++IS +G+ +E +K M S +C PN TY +IS L K +V +A E+
Sbjct: 343 IYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIAR 402
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+ +GI+P T S ++ LC +AM ++++ + GC+ Y +L+ L
Sbjct: 403 LLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSR 462
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K L+L EM+ +G + IY +I G C ++E A + +E +G + Y+
Sbjct: 463 KLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYN 522
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
L + L S ++E A L ++
Sbjct: 523 TLIDGLCKSKRVEDAAQLMDQM 544
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 183/398 (45%), Gaps = 2/398 (0%)
Query: 145 AMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIV 204
A + FNWA K PN Y I++ LG+ F++M VL +M G D I
Sbjct: 79 AALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIF 138
Query: 205 MDSFIRAGQVYKAIQMLGRLED-FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
++S+ + + + ++ +ED + +K D NV+L L + S +SM + +
Sbjct: 139 VESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRR 198
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ +V T+NI+I K QV +++E+ + G SPD TF+ +++G G +D A+
Sbjct: 199 IRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGAL 258
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+ + M E GC N +I+ + G D+ + + + S P+ TY L++GL
Sbjct: 259 RIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGL 318
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K A+EV + ML G+ P T S + LC G A+ + + C +
Sbjct: 319 CKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNA 378
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y ++ L + ++ + G D + +I GLC ++A+ + EE
Sbjct: 379 VTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEE 438
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
KG P Y+ L + L +S KLE A NL +++++
Sbjct: 439 MKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMEL 476
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 182/404 (45%), Gaps = 4/404 (0%)
Query: 136 VNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
+ GNL G + +++ DV + NV++ ++ D + + + EG
Sbjct: 249 IEGGNLDGALRIK--EQMVEYGCPCTDV-TVNVLINGFCKQGRIDQALSFIQEAVSEGFR 305
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
PD T + +++ + G A++++ + GL D + N ++ LC+ + A +
Sbjct: 306 PDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKI 365
Query: 256 FNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
+ M + N +TYN +IS K +V E + + + ++G PD TF+ LI+GL
Sbjct: 366 LDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCL 425
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
+ A+++F+ MK KGC PD YN +I + S +E + K M C N+
Sbjct: 426 SSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVI 485
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y LI G K++++ +A E+F+EM +G+ + T + ++ LC A + +
Sbjct: 486 YNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMI 545
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G + Y LL G D+ M SG D Y +I+GLC G+++
Sbjct: 546 MEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQ 605
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
A ++ KG + Y+ + L N+ A LFR++
Sbjct: 606 VASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREM 649
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 157/351 (44%), Gaps = 2/351 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +YN ++ L + + +L M +P+ T + ++ S + +V +A ++
Sbjct: 342 DIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIA 401
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
L G+ D + N ++ LC + +A LF MKGK + TYN++I
Sbjct: 402 RLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSS 461
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
++ E +LKE+ G + + + ++ LI+G + RI++A E+FD M+ +G D+ Y
Sbjct: 462 RKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTY 521
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I ++ + M P+ TY L++ K+ + A ++ + M
Sbjct: 522 NTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTS 581
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G P T + + LC G A + + + G L+ AY +++ L +
Sbjct: 582 SGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHE 641
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCN-IGQLENAVLVMEESLRKGFCP 510
+ L+ EM + P D Y+ V GLCN G + AV E + +G P
Sbjct: 642 AMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIP 692
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 136/334 (40%), Gaps = 72/334 (21%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ + + +YN I+ +L + D + + +G+ PD+ T + ++ + A
Sbjct: 373 DCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSA 432
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISG 276
+ + ++ G + D + N+++ LC + A +L M+ NV+ YN +I G
Sbjct: 433 MDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDG 492
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K ++ E E + E+ +G S DS+T++ LI+GL ++ R++DA ++ D M +G PD
Sbjct: 493 FCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPD 552
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL------------------ 378
YN++++++ GD + + M+S C P++ TY L
Sbjct: 553 KFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLR 612
Query: 379 -----------------ISGLLKSRKVADALEVFEEMLD--------------------- 400
I L K + +A+ +F EMLD
Sbjct: 613 SIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGG 672
Query: 401 ---------------RGIVPSTGTITSFLEPLCS 419
RG +P + E LC+
Sbjct: 673 GPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCT 706
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 6/245 (2%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V++D +YN ++ L + K + ++ M EG+ PD T + ++ F + G + KA
Sbjct: 514 VSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAA 573
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS--MKGKVLFNVMTYNIVISG 276
++ + G D + ++ LC+ V AS L S MKG VL YN VI
Sbjct: 574 DIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVL-TPHAYNPVIQA 632
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG-RIDDAIEVFDTMKEKGCGP 335
K + E R+ +E++ + PD++T+ + GL G I +A++ M E+G P
Sbjct: 633 LFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIP 692
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+ +++ + ++ D +K + + T I G LK RK DAL
Sbjct: 693 EFSSFVMLAEGLCTLSMDDTLVKLVDMIMEKAKFSEREIST--IRGFLKIRKFQDALSTL 750
Query: 396 EEMLD 400
+LD
Sbjct: 751 GGILD 755
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 207/424 (48%), Gaps = 3/424 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+ L + + + +V ++ R G + FFN HP+ + SY+ + R
Sbjct: 54 LAQTLHSPTIQWTPQLVNTILKRLWNDGPKALQFFNLLSHHPSYSHHPSSYDHAIDISAR 113
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ + +++ M + P +T +I+ + + AG+ ++A+++ + FG D +S
Sbjct: 114 LRDSPSLRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQS 173
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
N +L LC+ V A +LF KGK + ++YN++++GW + + + +LKE+V
Sbjct: 174 FNTILDVLCKSKRVEMAYNLFKVFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVK 233
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
G +P+ +++ +++G RAG+I++A + F MK++ C D Y VI + G+
Sbjct: 234 RGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKR 293
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
K + M P++ TY I L K V +A+ +FEEM+ +G VP++ T +
Sbjct: 294 ARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIR 353
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
LC G AM + + GC+ ++ Y L++R G+ LDL+ +M
Sbjct: 354 GLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLP 413
Query: 476 DGEIYEYVIAGLCNIGQLENAVL---VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
+ + Y +I+ + + ++ ++ ++ E + +GF P + ++++ N LL + A
Sbjct: 414 NLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNGLLLTGNQGFAK 473
Query: 533 NLFR 536
+ R
Sbjct: 474 EILR 477
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 124/277 (44%), Gaps = 13/277 (4%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
+Y+ I ++L + ++ + + P TF+ + E AG+ A++VF +M
Sbjct: 103 SYDHAIDISARLRDSPSLRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSM 162
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFD---ECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ GC D ++N ++ + K +KG +C +Y +++G
Sbjct: 163 HQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVFKGKFRADCV----SYNVMVNGWCLI 218
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
++ ALE+ +EM+ RG+ P+ + + L+ G + A + + +K C++ + Y
Sbjct: 219 KRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITY 278
Query: 446 KLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
++ GFG G + ++ M + G Y I LC ++NA+++ EE
Sbjct: 279 TTVIH---GFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEE 335
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ KG+ P+ + Y+ + L ++E A ++K
Sbjct: 336 MVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMK 372
>gi|334187687|ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15010, mitochondrial; Flags: Precursor
gi|332004721|gb|AED92104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 572
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 215/461 (46%), Gaps = 23/461 (4%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+ + L +V S ++V ++++R E FF WA K + V+ Y+ ++ LG+
Sbjct: 114 LRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGK 173
Query: 176 RKFFDFMCNVLSDMAKEGVNPDL---ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
+ FD ++ +M K +P L +TL I++ + V KAI + F L+
Sbjct: 174 MRKFDTAWTLIDEMRK--FSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMG 231
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSK-LGQVVEMERVLK 291
+ +L LC+ +V A L K K F+ ++NIV++GW +G E ERV
Sbjct: 232 IDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWM 291
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
E+ G D +++S +I + G ++ +++FD MK++ PD YNAV+
Sbjct: 292 EMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKAS 351
Query: 352 DFDECMKYYKGMSSYN-CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
E K M EPN+ TY LI L K+RK +A +VF+EML++G+ P+ T
Sbjct: 352 FVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTY 411
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+F+ L + + K RK+GC+ ++ Y +L+R+L + +L LW EM+E
Sbjct: 412 HAFMRILRT---GEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKE 468
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR----LVYSKLSNKLLASN 526
D Y +I GL G++E A +E KG P+ ++ S S K A
Sbjct: 469 KTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGKQYAEQ 528
Query: 527 KLESAYNLFRKIKIAR---------QNDYARRLWRSKGWHF 558
++ + K I + Q R++ R G+ F
Sbjct: 529 RITDSKGEVNKGAIVKKSEREKNFLQQPEVRKVVREHGYSF 569
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 209/443 (47%), Gaps = 9/443 (2%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E AL V + + +V+NR +G FF WA K P + Y ++K LG+
Sbjct: 108 LELALQESGVAVRSGLTERVLNRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKILGK 167
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLET---LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
+ F + ++ +M +E NP + ++M F A V KAI++L + +G + D
Sbjct: 168 MRQFGAVWALIEEMRRE--NPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPKYGCEPD 225
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
+L LC+ V A+SLF M+ + + + ++ GW + G+++E + VL +
Sbjct: 226 EHVFGCLLDALCKNGSVKEAASLFEDMRIRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQ 285
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
I GF PD + ++ L+ G AG++ DA ++ M+ K C P+ ++ +I +
Sbjct: 286 IREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKK 345
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
+E M+ + M S C + TYT LISG K K++ E+ + M+ +G +P+ T
Sbjct: 346 MEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLH 405
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
+ + + ++ RK+GC L Y +++R G+ + +W+EM+ +G
Sbjct: 406 IMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATG 465
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF--CPSRLVYSKLSNKLLASNKLES 530
+ + +I G + L A +E + +G P +L N LL + KLE
Sbjct: 466 LSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEM 525
Query: 531 AYNLFRKI--KIARQNDYARRLW 551
+ +++ I K N YA +W
Sbjct: 526 SKDVWSCIMTKGCDLNVYAWTIW 548
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 124/293 (42%), Gaps = 4/293 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V S+ +++AL +K + V +M G D T + ++ F + G++ K ++L
Sbjct: 329 NVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELL 388
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ G + + ++ ++ + L M K ++ YNIVI KL
Sbjct: 389 DNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKL 448
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG--CGPDTN 338
G++ E RV E+ A G SP TF +I G + +A E F M +G P
Sbjct: 449 GEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYG 508
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
++++ + + + + + C+ N+ +T I L + V +A +M
Sbjct: 509 TLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIHALFSNGHVKEACSYCLDM 568
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+D G++P T + L A + +K RK+ + +T +K+ RR
Sbjct: 569 MDAGVMPQPDTFAKLMRGLRKLYNRQIAAEITEKVRKMAAEREMT-FKMYKRR 620
>gi|449457341|ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
gi|449523938|ref|XP_004168980.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 206/436 (47%), Gaps = 16/436 (3%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E +L ++ S ++ + + R + + FF++A P+ SYN+++ L +
Sbjct: 55 MESSLQLHSISFSSHLLDQTLLRLTHHSKIALSFFDYANSLPSNPISTTSYNILLDILAK 114
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDF-GLKFDAE 234
+ FD +++ M +G + T +++ I +G+ +AI+ +E G K +
Sbjct: 115 VRQFDAAWHLILQMDHKGTD----TFLLLIRRLISSGRTRQAIRAFDDIEGLTGNKVGID 170
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
+L LC+ +V A +FN K + +V Y I+I GW K+G+ ER LK++V
Sbjct: 171 DFCYLLDVLCKYGYVKVAVEVFNKRKEEFGVDVKIYTILIYGWCKIGRFEMAERFLKDMV 230
Query: 295 AEGFSPDSLTFSFLIEGLGR------AGRIDDAI----EVFDTMKEKGCGPDTNAYNAVI 344
G P+ +T++ L+ G+ R GR + I +VFD M+++G PD +++ V+
Sbjct: 231 ERGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRHAEKVFDEMRKRGIEPDVTSFSIVL 290
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
Y + + K M P + TYT +I L ++ D + EEM+ GI
Sbjct: 291 HVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDGENLIEEMVRSGIS 350
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARK-VGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
PS T F + A+ +YKK R+ C SL Y +LL K L +
Sbjct: 351 PSPTTYNCFFKEYRGRKDGAGALRLYKKMREDCLCAPSLHTYNILLALFLNLDKKETLKE 410
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
LW++M+ESG D + Y +I GLC + A E + +GF P ++ + L L+
Sbjct: 411 LWNDMKESGVGPDLDSYTTIIHGLCEKQRWSEACQFFVEMIERGFLPQKVTFEMLYRGLI 470
Query: 524 ASNKLESAYNLFRKIK 539
S+ L + L +K++
Sbjct: 471 QSDMLRTWRRLKKKLE 486
>gi|449431996|ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
gi|449477985|ref|XP_004155184.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
Length = 485
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 181/384 (47%), Gaps = 6/384 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+ + L + + +S ++V V++R EA FF WA K P A V+ Y+ ++ LG+
Sbjct: 30 VRNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFFVWAGKQPGYAHSVREYHSMISILGK 89
Query: 176 RKFFDFMCNVLSDMAKEGVNPDL---ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
+ FD ++ +M L +TL I++ + V KAI + FG
Sbjct: 90 MRKFDTAWALIDEMRGGTPGSSLVTPQTLLIMIRRYCAVHDVAKAINTFYAHKRFGFNIG 149
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
E +L LC+ +V A L K FN ++NI+++GW +G + + ERV KE
Sbjct: 150 LEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIILNGWCVIGSLRDTERVWKE 209
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+ G S D+++++ I + + + +F+ MK PD YNAVI +
Sbjct: 210 MTRRGISHDAVSYASCISCYSKVRNLHKVLRLFEDMKRMKIDPDRKVYNAVIHSLAKGRC 269
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
E K M N+ TY +I L K+R+ +A VFEE+L RG+ P+ T +
Sbjct: 270 LKEAADLIKTMEEKGIIANVVTYNSVIKPLCKARRFDEARAVFEELLQRGLCPTIQTYHA 329
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
FL L + + KK R +GC + Y +L+R+ + + + +WHEM E+G
Sbjct: 330 FLRFLRT---EEEIFELLKKMRTMGCNPTTDTYIMLIRKFCRWRQLDNVSRIWHEMSENG 386
Query: 473 YPSDGEIYEYVIAGLCNIGQLENA 496
D Y +I GL G+LE+A
Sbjct: 387 ISPDRSSYIVLIHGLFLNGKLEDA 410
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 87/211 (41%), Gaps = 33/211 (15%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D SY + + + + + DM + ++PD + + V+ S + + +A
Sbjct: 215 ISHDAVSYASCISCYSKVRNLHKVLRLFEDMKRMKIDPDRKVYNAVIHSLAKGRCLKEAA 274
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM---------- 268
++ +E+ G+ + + N V+ LC+ A ++F + + L +
Sbjct: 275 DLIKTMEEKGIIANVVTYNSVIKPLCKARRFDEARAVFEELLQRGLCPTIQTYHAFLRFL 334
Query: 269 -----------------------TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
TY ++I + + Q+ + R+ E+ G SPD ++
Sbjct: 335 RTEEEIFELLKKMRTMGCNPTTDTYIMLIRKFCRWRQLDNVSRIWHEMSENGISPDRSSY 394
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
LI GL G+++DA + + MKEK P+
Sbjct: 395 IVLIHGLFLNGKLEDAHKYYLEMKEKDLLPE 425
>gi|326531326|dbj|BAK05014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 184/387 (47%), Gaps = 5/387 (1%)
Query: 126 DLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNV 185
++ DVV KV+ + + + +LFF WA P ++Y ++ LGR K M +
Sbjct: 109 EIDEDVVLKVLQKQRSNWQVALLFFTWAAGLPTYEHGPRTYIEMLDILGRMKKVRLMRQL 168
Query: 186 LSDMAKE--GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
++ ++ G+ +++++ + A +V +AI++ + D+G + D ++L L
Sbjct: 169 FDEIPEQRRGLVVTNRMFAVLLNRYAGAHKVQEAIEIFYKRNDYGFEVDLVGFQILLMSL 228
Query: 244 CQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
C+ HV A +LF K + + ++NI+++GW G + + +RV EI+A PD
Sbjct: 229 CRYKHVEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSLPDAKRVWNEIIASKLKPDLF 288
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T+ I L +AG++ A+++F +M EKG PD N +I E +K + M
Sbjct: 289 TYGTFINALTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALKIFGEM 348
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ C+ ++ TY LI K R+ E+ ++M +G P+ T T L+ + P
Sbjct: 349 NDRGCQADVATYNTLIKHFCKIRRTEKVYELLDDMEKKGCSPNNMTYTYILK---TTEKP 405
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
M + ++ + GCKL Y L+L + +W EM+ +G D + +
Sbjct: 406 RDVMNLIQRMEESGCKLDSDTYNLILNLYVSMKYEKGVQQVWEEMERNGSGPDQRSFTIM 465
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCP 510
+ GL + GQL+ A+ +G P
Sbjct: 466 VHGLHSQGQLDQALQYYTTMKSRGMTP 492
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 152/324 (46%), Gaps = 16/324 (4%)
Query: 96 LLPEERLRGVFLQKLKGKGVIEDAL--------WNVNVDL-SLDVVGKVVNRGNLSGEAM 146
L+ R+ V L + G +++A+ + VDL ++ + R EA
Sbjct: 179 LVVTNRMFAVLLNRYAGAHKVQEAIEIFYKRNDYGFEVDLVGFQILLMSLCRYKHVEEAE 238
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
LF + P V +KS+N+I+ + V +++ + PDL T ++
Sbjct: 239 ALFLQKKDEFPPV---IKSWNIILNGWCVKGSLPDAKRVWNEIIASKLKPDLFTYGTFIN 295
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLF 265
+ +AG++ A+++ + + G+ D N ++ LC + + A +F M +
Sbjct: 296 ALTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALKIFGEMNDRGCQA 355
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V TYN +I + K+ + ++ +L ++ +G SP+++T++++++ + D + +
Sbjct: 356 DVATYNTLIKHFCKIRRTEKVYELLDDMEKKGCSPNNMTYTYILKTTEKP---RDVMNLI 412
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
M+E GC D++ YN +++ Y+S+ + ++ M P+ ++T ++ GL
Sbjct: 413 QRMEESGCKLDSDTYNLILNLYVSMKYEKGVQQVWEEMERNGSGPDQRSFTIMVHGLHSQ 472
Query: 386 RKVADALEVFEEMLDRGIVPSTGT 409
++ AL+ + M RG+ P T
Sbjct: 473 GQLDQALQYYTTMKSRGMTPEPRT 496
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 97/223 (43%), Gaps = 33/223 (14%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y + AL + + + M ++G+NPD+ + ++D ++ +A+++
Sbjct: 286 DLFTYGTFINALTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALKIF 345
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--------------------KG 261
G + D G + D + N ++ C+ L + M K
Sbjct: 346 GEMNDRGCQADVATYNTLIKHFCKIRRTEKVYELLDDMEKKGCSPNNMTYTYILKTTEKP 405
Query: 262 KVLFNVM-------------TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
+ + N++ TYN++++ + + +++V +E+ G PD +F+ +
Sbjct: 406 RDVMNLIQRMEESGCKLDSDTYNLILNLYVSMKYEKGVQQVWEEMERNGSGPDQRSFTIM 465
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
+ GL G++D A++ + TMK +G P+ V + +I G
Sbjct: 466 VHGLHSQGQLDQALQYYTTMKSRGMTPEPRTRILVKAIHIKKG 508
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 121/280 (43%), Gaps = 40/280 (14%)
Query: 260 KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
+G V+ N M + ++++ ++ +V E + + GF D + F L+ L R ++
Sbjct: 177 RGLVVTNRM-FAVLLNRYAGAHKVQEAIEIFYKRNDYGFEVDLVGFQILLMSLCRYKHVE 235
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
+A +F K++ P ++N +++ + G + + + + + +P++ TY I
Sbjct: 236 EAEALFLQKKDE-FPPVIKSWNIILNGWCVKGSLPDAKRVWNEIIASKLKPDLFTYGTFI 294
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
+ L K+ K++ A+++F M ++GI P ++ LC +KK
Sbjct: 295 NALTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLC-----------FKK------- 336
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
K L ++ EM + G +D Y +I C I + E +
Sbjct: 337 -----------------KIPEALKIFGEMNDRGCQADVATYNTLIKHFCKIRRTEKVYEL 379
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+++ +KG P+ + Y+ + L + K NL ++++
Sbjct: 380 LDDMEKKGCSPNNMTYTYI---LKTTEKPRDVMNLIQRME 416
>gi|297841875|ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334660|gb|EFH65078.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 512
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 211/430 (49%), Gaps = 5/430 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L +V LS ++ +V+ + + +G + F WA +YN ++++LG+
Sbjct: 83 VETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGK 142
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
K F + N++ DM ++ + +T +++ + RA +V +AI ++ED+G K ++
Sbjct: 143 IKQFKLIWNLVDDMKQKKLLSK-DTFALISRRYARARKVKEAITAFHKMEDYGFKMESSD 201
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIV 294
N +L L + +VG A +F+ MK K ++ +Y I++ GW + ++ + V E+
Sbjct: 202 FNRMLDILSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVNEVYGEMK 261
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
EGF PD + + +I +A + D+A+ F+ M+++ C P + + ++I+ S +
Sbjct: 262 DEGFEPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLN 321
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ +++++ S TY L+ S+++ DA + +EM +GI P+ T L
Sbjct: 322 DALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIIL 381
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
L A +Y +K+ C+ +++ Y++++R + M + +W EM+ G
Sbjct: 382 HHLIRMQRTKEAYEVY---QKMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVL 438
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
++ +I LC+ +L+ A E L G P ++S+L LL + + +L
Sbjct: 439 PGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHLFSRLKQTLLDEGRKDKVADL 498
Query: 535 FRKIKIARQN 544
K+ R+
Sbjct: 499 AVKMDRLRKT 508
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 198/381 (51%), Gaps = 7/381 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+ DV +YN I+ L + + D +V M ++GV P+ T + ++D +A +V A
Sbjct: 221 VSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAE 280
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+ ++ D G+K + N ++ LC+ V A +F M + V + +TYN +I G
Sbjct: 281 GVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGL 340
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K + + E V ++++ +G PD+LT++ +I+GL +A +D A VF M +KG P+
Sbjct: 341 CKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNN 400
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I Y+S G ++E ++ K MS+++ EP++ TY L+ L K+ K +A +F+
Sbjct: 401 GTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDS 460
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ +GI PS +T + L YG A M+ + +++ + + K
Sbjct: 461 MIRKGIKPS---VTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAK 517
Query: 458 CGMLLDLWH---EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
M+ ++ H +M++ G + Y +I LC +G++++AVL + + +G P+ +V
Sbjct: 518 RAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVV 577
Query: 515 YSKLSNKLLASNKLESAYNLF 535
++ L L +K E LF
Sbjct: 578 FNSLVYGLCTVDKWEKVEELF 598
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 203/485 (41%), Gaps = 66/485 (13%)
Query: 100 ERLRGVFLQKLKGKGV---------IEDALWNVN-VDLSLDVVGKVVNRGNLSGEAMVLF 149
+R VF Q++ KGV I D L VD++ V K+V++G
Sbjct: 242 DRAEDVF-QQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKG---------- 290
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
+K NV +YN I+ L + + D V M GV PD T + ++D
Sbjct: 291 ----VKPSNV-----TYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLC 341
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVM 268
+A + KA + ++ D G+K D + +++ LC+ V A +F M K V N
Sbjct: 342 KAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNG 401
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TYN +I G+ GQ E+ + +KE+ A PD T+ L++ L + G+ ++A +FD+M
Sbjct: 402 TYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSM 461
Query: 329 KEKGCGPDTNAY-----------------------------------NAVISNYISVGDF 353
KG P Y N VI Y
Sbjct: 462 IRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMI 521
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
DE M + M PN+ TY LI L K +V DA+ F +M++ G+ P+ S
Sbjct: 522 DEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSL 581
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
+ LC+ ++ + G + + + +L L G+ L M G
Sbjct: 582 VYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGL 641
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
D Y +I G C +++ AV +++ + G P+ + Y+ L + + ++++AY
Sbjct: 642 KPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYC 701
Query: 534 LFRKI 538
LFR++
Sbjct: 702 LFREM 706
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 185/448 (41%), Gaps = 60/448 (13%)
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA-------- 190
GNL + F+ + H A V++ N ++ + R K C+ S +A
Sbjct: 20 GNLGLHDALKLFDELLLHARPAS-VRALNQLLSVVSRAK-----CSSSSKLAVSRFNRML 73
Query: 191 ---KEGVNPDLETLSIVMDSFIRAG----------------------------------- 212
V PD T SIV+ F R G
Sbjct: 74 RDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTK 133
Query: 213 QVYKAIQMLGR-LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM----KGKVLFNV 267
+V +A+ +L R + + G + S N +L LC R A L + M +V
Sbjct: 134 RVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDV 193
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
++YNIVI+G+ GQV + + E+ G SPD +T++ +I+GL +A +D A +VF
Sbjct: 194 VSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQ 250
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M EKG P+ YN +I + D ++ M +P+ TY +I GL K++
Sbjct: 251 MVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQA 310
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
V A VF++M+DRG+ P T + ++ LC A ++++ G K Y +
Sbjct: 311 VDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTI 370
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
++ L ++ +M + G + Y +I G + GQ E V ++E
Sbjct: 371 IIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHD 430
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLF 535
P Y L + L + K A +LF
Sbjct: 431 LEPDVFTYGLLLDYLCKNGKCNEARSLF 458
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 195/465 (41%), Gaps = 65/465 (13%)
Query: 114 GVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAK--DVKSYNVIVK 171
G+I W V+ D+ ++ + K + GEAM + + P V V SYN ++K
Sbjct: 108 GLILKTGWRVD-DIVVNQLLKGLCDTKRVGEAMHVLLR---QMPEVGCRLGVVSYNTLLK 163
Query: 172 ALGRRKFFDF---MCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
L R+ + + +++ D +PD+ + +IV++ F GQV KA +
Sbjct: 164 GLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLF------- 216
Query: 229 LKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMER 288
L +G + +V+TYN +I G K +V E
Sbjct: 217 ------------------LEMGVSP------------DVVTYNTIIDGLCKAQEVDRAED 246
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
V +++V +G P+++T++ +I+GL +A +D A VF M +KG P YN +I
Sbjct: 247 VFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLC 306
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTG 408
D ++ M +P+ TY +I GL K++ + A VF++M+D+G+ P
Sbjct: 307 KAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNL 366
Query: 409 TITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM 468
T T ++ LC A ++++ G K + Y L+ G+ ++ EM
Sbjct: 367 TYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM 426
Query: 469 QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN-------- 520
D Y ++ LC G+ A + + +RKG PS +Y + +
Sbjct: 427 SAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGAL 486
Query: 521 -------KLLASNKLESAYNLFRKIKIARQNDYARRLWRSKGWHF 558
L+ +N + + +F + A YA+R + H
Sbjct: 487 SEMHDLLNLMVANGISPNHRIFNTVICA----YAKRAMIDEVMHI 527
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 176/374 (47%), Gaps = 1/374 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ + + +N ++ A +R D + ++ M ++G++P++ T ++D+ + G+V A+
Sbjct: 501 ISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAV 560
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ + G+ + N +++ LC LF M + + +++ +N V+
Sbjct: 561 LQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNL 620
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G+V+E R++ +V G PD ++++ LI+G A R+D+A+++ D M G P+
Sbjct: 621 CKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNI 680
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+YN ++ Y G D ++ M P ++TY +++GL +S + ++A E++
Sbjct: 681 VSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVN 740
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ + S T + L+ C A +++ + +L + + +++ L G+
Sbjct: 741 MIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGR 800
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+DL+ + +G Y + L G LE + + G P+ + +
Sbjct: 801 KEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNA 860
Query: 518 LSNKLLASNKLESA 531
L KLL ++ A
Sbjct: 861 LIRKLLDRGEIPRA 874
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 176/430 (40%), Gaps = 79/430 (18%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D +Y +I+ L + + D V M +GV P+ T + ++ ++ GQ + +
Sbjct: 361 VKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVV 420
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
Q + + L+ D + ++L LC+ A SLF+SM K + +V Y I++ G+
Sbjct: 421 QRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGY 480
Query: 278 SKLGQVVEMERVLKEIVA-----------------------------------EGFSPDS 302
K G + EM +L +VA +G SP+
Sbjct: 481 GKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNV 540
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+T+ LI+ L + GR+DDA+ F+ M +G P+ +N+++ +V +++ + +
Sbjct: 541 VTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLE 600
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M + P++ + ++ L K +V +A + + M+ G+ P + + ++ C
Sbjct: 601 MLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASR 660
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A+ + G K ++ +Y LL
Sbjct: 661 MDEAVKLLDGMVSAGLKPNIVSYNTLLH-------------------------------- 688
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF-RKIKIA 541
G C G+++NA + E LRKG P Y+ + N L S + A L+ IK
Sbjct: 689 ---GYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIK-- 743
Query: 542 RQNDYARRLW 551
+R+LW
Sbjct: 744 -----SRKLW 748
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 196/453 (43%), Gaps = 23/453 (5%)
Query: 64 QISSHNSFPNVY----------KESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGK 113
++S+H+ P+V+ K + N + + S + + + P + G+ L K
Sbjct: 425 EMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDS-MIRKGIKPSVTIYGIMLHGYGKK 483
Query: 114 GVIEDA--LWNVNVDLSLDVVGKVVN-------RGNLSGEAMVLFFNWAIKHPNVAKDVK 164
G + + L N+ V + ++ N + + E M +F +K ++ +V
Sbjct: 484 GALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIK--MKQQGLSPNVV 541
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y ++ AL + D + M EGV P+ + ++ + K ++ +
Sbjct: 542 TYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEM 601
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQV 283
+ G++ D N VL LC+ V A L +SM L +V++YN +I G ++
Sbjct: 602 LNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRM 661
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E ++L +V+ G P+ ++++ L+ G +AGRID+A +F M KG P YN +
Sbjct: 662 DEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTI 721
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
++ G F E + Y M ++ TY+ ++ G K+ +A ++F+ + +
Sbjct: 722 LNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDL 781
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
T ++ L G AM ++ G S+ Y+L+ L G L
Sbjct: 782 QLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDC 841
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
L+ M++SG + + +I L + G++ A
Sbjct: 842 LFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRA 874
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 52/267 (19%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
++ M G+ PD+ + + ++D A ++ +A+++L + GLK + S N +L C
Sbjct: 632 LIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYC 691
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERV-------------- 289
+ + A LF M K V V TYN +++G + G+ E +
Sbjct: 692 KAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSIC 751
Query: 290 LKEIVAEGFSP---------------------DSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
I+ +GF D +TF+ +I+GL + GR +DA+++F +
Sbjct: 752 TYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAI 811
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
G P Y + N I G +E + M PN + +++ L++
Sbjct: 812 PANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPN----SHMLNALIR---- 863
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLE 415
++LDRG +P G S L+
Sbjct: 864 --------KLLDRGEIPRAGAYLSKLD 882
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 102/225 (45%), Gaps = 5/225 (2%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PN+ SYN ++ + D + +M ++GV P +ET + +++ R+G+ +
Sbjct: 678 PNIV----SYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSE 733
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVIS 275
A ++ + + + +++L C+ A +F S+ L +++T+NI+I
Sbjct: 734 ARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMID 793
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G K G+ + + I A G P +T+ + E L G +++ +F M++ G P
Sbjct: 794 GLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAP 853
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
+++ NA+I + G+ Y + N T + LIS
Sbjct: 854 NSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLIS 898
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 187/376 (49%), Gaps = 36/376 (9%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YNV++ A +R + C+++ M ++G PD+ T + VMD ++ +V +A+ + +
Sbjct: 82 TYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM 141
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
E G + S N ++ LCQ+ + A +F+ M+ K + + +Y I+I G +K G++
Sbjct: 142 ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKL 201
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E ++ + ++ G +P ++T++ +I G+ A +D+A+E+F +M+ KGC P +N +
Sbjct: 202 NEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNIL 261
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I + G DE + K M+ P++ TY+ LISGL +V DA + E+M+ R
Sbjct: 262 IDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 321
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T + + LC G K+AR+V LD
Sbjct: 322 KPTVVTQNTLIHGLCKAG-------RIKEAREV-------------------------LD 349
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
M SG D Y ++ G C GQ E A ++ + + +G P+ + Y+ L + L
Sbjct: 350 ---AMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLC 406
Query: 524 ASNKLESAYNLFRKIK 539
+N+L A +F ++K
Sbjct: 407 KANRLPEACGVFAQMK 422
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 177/348 (50%), Gaps = 1/348 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + V+PD + I++D +AG++ A + +L G+ + ++ LC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
A LF M + + +TYN++I K G + E ++K+++ +G PD +T++
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
+++GL ++ R+++A+ +F+ M+ GC P+ ++N +I D+ + + M + +
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
P+ +Y LI GL K+ K+ +A ++F+ MLD GI PS T + +C A+
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++K R GC+ S + +L+ GK L M + G+ D Y +I+GL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
C+I ++++A ++E+ +++ P+ + + L + L + +++ A +
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVL 348
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 158/346 (45%), Gaps = 13/346 (3%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YNV++ + D + M +G P T +I++D+ + G++ +A ++L R+
Sbjct: 222 TYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRM 281
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
D G D + + ++ LC V A L M K + V+T N +I G K G++
Sbjct: 282 TDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRI 341
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E VL +V+ G SPD +T++ L+ G RAG+ + A E+ M +G P+ Y A+
Sbjct: 342 KEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTAL 401
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+S E + M S C PN+ TYT LI G + +V L++F EM+ GI
Sbjct: 402 VSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGI 461
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA-------YKLLLRRLSGFG 456
P + LC G A+ + ++ R+ SL + Y+ + L G
Sbjct: 462 SPDHVVYGTLAAELCKSGRSARALEILREGRE-----SLRSEAWGDEVYRFAVDGLLEAG 516
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
K M L +M G E ++AGLC GQ A V+EE
Sbjct: 517 KMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEE 562
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 119/241 (49%)
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
SPDS ++ LI+GL +AG+++DA +F + G P T AY ++I FD+ +
Sbjct: 7 SPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARE 66
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
+ M+ C P+ TY +I K + +A ++ ++M++ G VP T + ++ LC
Sbjct: 67 LFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLC 126
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
A++++ + ++GC + ++ ++ L K ++HEM+ P D
Sbjct: 127 KSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSW 186
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y +I GL G+L A + + L G PS + Y+ + + + + L+ A LF+ +
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246
Query: 539 K 539
+
Sbjct: 247 R 247
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 126/270 (46%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
+Y I+I G +K G++ + + ++++ G +P ++ ++ LI GL A DDA E+F M
Sbjct: 12 SYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 71
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+GC P YN +I G +E K M P++ TY ++ GL KS +V
Sbjct: 72 NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRV 131
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+AL +F EM G P+ + + + LC A ++ + +Y +L
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGIL 191
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L+ GK L+ M +SG Y VI G+C L+ A+ + + KG
Sbjct: 192 IDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGC 251
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
PSR ++ L + KL+ A+ L +++
Sbjct: 252 RPSRFTFNILIDAHCKRGKLDEAFRLLKRM 281
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 110/243 (45%), Gaps = 7/243 (2%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V + N ++ L + VL M G +PD+ T + ++ RAGQ +A ++L
Sbjct: 325 VVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLS 384
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+ GL + + ++ LC+ + A +F MK N+ TY +I G+ G
Sbjct: 385 DMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAG 444
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF----DTMKEKGCGPDT 337
QV ++ E+V G SPD + + L L ++GR A+E+ ++++ + G +
Sbjct: 445 QVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV 504
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y + + G + + + + M P + L++GL KS + +A V EE
Sbjct: 505 --YRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEE 562
Query: 398 MLD 400
++D
Sbjct: 563 IMD 565
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%)
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M+ N P+ +Y LI GL K+ K+ DA +F+++L G+ PST TS + LC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A ++ + GC S Y +++ G DL +M E G+ D Y
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
V+ GLC ++E A+L+ E R G P+R ++ + L +K++ A +F +++
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 90/211 (42%)
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M E+ PD+ +Y +I G ++ ++ + P+ YT LI GL +
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
DA E+F +M RG PS T ++ C G A + KK + G + Y
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
++ L + L L++EM+ G + + +I GLC +++ A V E K
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P Y L + L + KL AY LF+++
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRM 211
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 125/315 (39%), Gaps = 23/315 (7%)
Query: 32 SNLSYNELLSNQKKNMSSLDEH-HVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSR 90
S ++N L+ K LDE +LK ++D + ++ + S S+ R+D +R
Sbjct: 254 SRFTFNILIDAHCKR-GKLDEAFRLLKRMTDDGHVPDVVTYSTLI--SGLCSIARVDDAR 310
Query: 91 AVDEFLL-----PEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVN-------- 137
+ E ++ P + + L G I++A ++ +S VV
Sbjct: 311 HLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGH 370
Query: 138 -RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNP 196
R + A L + + +A +V +Y +V L + C V + M G P
Sbjct: 371 CRAGQTERARELLSDMVAR--GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 428
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
+L T + ++ F AGQV +++ G + G+ D + LC+ A +
Sbjct: 429 NLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 488
Query: 257 NSMKGKV---LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
+ + + Y + G + G++ ++++V G P + L+ GL
Sbjct: 489 REGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLC 548
Query: 314 RAGRIDDAIEVFDTM 328
++G+ +A V + +
Sbjct: 549 KSGQGGEARAVLEEI 563
>gi|297807523|ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317482|gb|EFH47904.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 224/470 (47%), Gaps = 24/470 (5%)
Query: 78 SRSNSVKRIDSSRAVD---EFLLPEERLR---GVFLQKLKGKGV----IEDALWNVNVDL 127
+RSN K +S +D F + ++ + G ++ LK G + + L +V
Sbjct: 15 TRSNIEKDDESEEEIDLDLGFTISDDGVSEDVGTIVKLLKNCGSDRKELRNKLEECDVKP 74
Query: 128 SLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLS 187
S ++V +++++ E FF WA K + V+ Y+ ++ LG+ + FD ++
Sbjct: 75 SNELVVEILSQVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLID 134
Query: 188 DMAKEGVNPDL---ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+M K +P L +TL I++ + V KAI + F L+ + +L LC
Sbjct: 135 EMRK--FSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALC 192
Query: 245 QRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSK-LGQVVEMERVLKEIVAEGFSPDSL 303
+ +V A L K F+ ++NIV++GW +G E ERV E+ G D +
Sbjct: 193 RYKNVSDAEHLIFCNKDTYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVV 252
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
++S +I + G ++ +++FD MK++ PD YNAVI E K M
Sbjct: 253 SYSSMISCYSKGGSLNKVLKLFDRMKKESIEPDRKVYNAVIHALAKASFVSEARNLMKTM 312
Query: 364 SSYN-CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
EPN+ TY LI L K+RK +A +VF+EML++G+ P+ T +F+ L +
Sbjct: 313 EEEKGMEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRT--- 369
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
+ K RK+GC+ ++ Y +L+R+L + +L LW+EM+E G D Y
Sbjct: 370 GEEVFELLAKMRKMGCQPTVDTYIMLIRKLCRWRDFDNVLLLWNEMKEKGVGPDLSSYIV 429
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSR----LVYSKLSNKLLASNKL 528
+I GL G++E A +E KG P+ ++ S S K A ++
Sbjct: 430 MIHGLFLNGKIEEAYGYYKEMKEKGMRPNENVEDMIQSWFSGKQYAEQRV 479
>gi|9755668|emb|CAC01820.1| putative protein [Arabidopsis thaliana]
Length = 532
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 215/461 (46%), Gaps = 23/461 (4%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+ + L +V S ++V ++++R E FF WA K + V+ Y+ ++ LG+
Sbjct: 74 LRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGK 133
Query: 176 RKFFDFMCNVLSDMAKEGVNPDL---ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
+ FD ++ +M K +P L +TL I++ + V KAI + F L+
Sbjct: 134 MRKFDTAWTLIDEMRK--FSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMG 191
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSK-LGQVVEMERVLK 291
+ +L LC+ +V A L K K F+ ++NIV++GW +G E ERV
Sbjct: 192 IDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWM 251
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
E+ G D +++S +I + G ++ +++FD MK++ PD YNAV+
Sbjct: 252 EMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKAS 311
Query: 352 DFDECMKYYKGMSSYN-CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
E K M EPN+ TY LI L K+RK +A +VF+EML++G+ P+ T
Sbjct: 312 FVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTY 371
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+F+ L + + K RK+GC+ ++ Y +L+R+L + +L LW EM+E
Sbjct: 372 HAFMRILRT---GEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKE 428
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR----LVYSKLSNKLLASN 526
D Y +I GL G++E A +E KG P+ ++ S S K A
Sbjct: 429 KTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGKQYAEQ 488
Query: 527 KLESAYNLFRKIKIAR---------QNDYARRLWRSKGWHF 558
++ + K I + Q R++ R G+ F
Sbjct: 489 RITDSKGEVNKGAIVKKSEREKNFLQQPEVRKVVREHGYSF 529
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 180/381 (47%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D YN ++ L + +V ++M G+ PD+ TL+ ++ + RA QV A+
Sbjct: 156 VQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAV 215
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
ML + + D + ++ + + AA + M + +T N++I+G+
Sbjct: 216 LMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGY 275
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K+G+V + +++ +A+GF PD +T++ + L + G + A++V D M ++G PD
Sbjct: 276 CKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDV 335
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN VI+ G+ DE M C P+ T+ LI L ++ +AL++ E
Sbjct: 336 FTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARE 395
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ +G+ P T + LC G PH + ++++ + GC Y +L+ L GK
Sbjct: 396 LTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGK 455
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
LDL EM+ +G P Y +I LC ++E A V ++ G S + ++
Sbjct: 456 LVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNT 515
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L + L + +++ A L ++
Sbjct: 516 LIDGLCKAKRIDDATELIEQM 536
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 185/451 (41%), Gaps = 71/451 (15%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV + N ++KAL R +L +M+ V PD T + +M FI G + A+
Sbjct: 191 IQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAAL 250
Query: 219 QM-------------------------LGRLEDF----------GLKFDAESLNVVLWCL 243
++ +GR+ED G + D + N + CL
Sbjct: 251 RVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCL 310
Query: 244 CQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVL------------ 290
CQ HV A + + M + +V TYN VI+ SK G++ E + ++
Sbjct: 311 CQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDT 370
Query: 291 -----------------------KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+E+ +G SPD TF+ LI L + G I +F+
Sbjct: 371 TTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEE 430
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
MK GC PD YN +I + S+G + K M S C + TY +I L K +
Sbjct: 431 MKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMR 490
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A EVF++M GI S T + ++ LC A + ++ K G + S Y
Sbjct: 491 IEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNS 550
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
+L G D+ M +G+ D Y +I GLC G+ + A+ ++ KG
Sbjct: 551 ILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 610
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ Y+ + L N L A +LFR++
Sbjct: 611 IRPTPKAYNPVIQSLFRRNNLRDALSLFREM 641
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 195/439 (44%), Gaps = 39/439 (8%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
R EA + N A+ + A Y I++ LG FD M ++ +M +EG
Sbjct: 64 REQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAG 123
Query: 198 LETLSIVMDSFIRAGQVYKAIQML-GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
+ ++S+ R + A+ ++ +L FG++ D N +L L + + S++
Sbjct: 124 AGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVY 183
Query: 257 NSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
N M + + +V+T N +I + QV +L+E+ + +PD TF+ L++G
Sbjct: 184 NEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEE 243
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
G I+ A+ V M E GC P N +I+ Y +G ++ + Y + + EP+ TY
Sbjct: 244 GSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTY 303
Query: 376 TRLISGLLKSRKVADALEVFE-----------------------------------EMLD 400
+ L ++ V+ AL+V + +M+D
Sbjct: 304 NTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVD 363
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
RG +P T T + + LCS A+ + ++ G + + +L+ L G +
Sbjct: 364 RGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHL 423
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP-SRLVYSKLS 519
+ L+ EM+ SG D Y +I LC++G+L NA+ +++E G CP S + Y+ +
Sbjct: 424 GIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNG-CPRSTVTYNTII 482
Query: 520 NKLLASNKLESAYNLFRKI 538
+ L ++E A +F ++
Sbjct: 483 DALCKQMRIEEAEEVFDQM 501
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 177/399 (44%), Gaps = 37/399 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN V L + V+ M +EG +PD+ T + V++ + G++ +A ++
Sbjct: 299 DQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIV 358
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
++ D G D + N ++ LC + + A L + K L +V T+NI+I+ K+
Sbjct: 359 NQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKV 418
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G R+ +E+ + G +PD +T++ LI+ L G++ +A+++ M+ GC T Y
Sbjct: 419 GDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTY 478
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I +E + + M ++ + T+ LI GL K++++ DA E+ E+M+
Sbjct: 479 NTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVK 538
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC-- 458
G+ PS T S L C G A + + G ++ + Y L+ L G+
Sbjct: 539 EGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQV 598
Query: 459 ------GM---------------------------LLDLWHEMQESGYPSDGEIYEYVIA 485
GM L L+ EM E G P D Y+ V
Sbjct: 599 ALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFR 658
Query: 486 GLC-NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
GLC G ++ A + E + KGF P + L+ LL
Sbjct: 659 GLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLL 697
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 177/372 (47%), Gaps = 21/372 (5%)
Query: 122 NVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDF 181
N +D + +V ++V+RG L D ++N ++ AL + +
Sbjct: 348 NGELDEAKGIVNQMVDRGCLP-------------------DTTTFNTLIVALCSQNRLEE 388
Query: 182 MCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLW 241
++ ++ +G++PD+ T +I++++ + G + I++ ++ G D + N+++
Sbjct: 389 ALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILID 448
Query: 242 CLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
LC + A L M+ + +TYN +I K ++ E E V ++ A G S
Sbjct: 449 HLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISR 508
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
++TF+ LI+GL +A RIDDA E+ + M ++G P YN+++++Y GD +
Sbjct: 509 SAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADIL 568
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
+ M++ E ++ TY LI+GL K+ + AL++ M +GI P+ ++ L
Sbjct: 569 ETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRR 628
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS-GFGKCGMLLDLWHEMQESGYPSDGEI 479
A+ ++++ +VG YK++ R L G G D EM G+ +
Sbjct: 629 NNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSS 688
Query: 480 YEYVIAGLCNIG 491
+ + GL N+G
Sbjct: 689 FRMLAEGLLNLG 700
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 212/432 (49%), Gaps = 5/432 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
I L + V +S +V +V+ + +G + FF WA + + ++ +++ALG+
Sbjct: 107 IAPVLDALGVTVSPQLVAEVLKNLSNAGILALAFFRWAERQQGFRYSAEGFHNLIEALGK 166
Query: 176 RKFFDFMCNVLSDM-AKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
K F + +++ M + ++ D T I++ + RA +V +A++ ++ FGLK D
Sbjct: 167 IKQFRLVWSLVEAMRCRSCLSKD--TFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLS 224
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
N ++ L + V A ++F MK G+ + ++ TY +++ GW ++ ++ V +E
Sbjct: 225 DYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQE 284
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
++ G PD + + LI ++G+ D+AI+VF M+E GC P + Y +I+ S+
Sbjct: 285 MLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMER 344
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
DE +KY++ + T +I ++ + A ++ +EM GI P+T T
Sbjct: 345 LDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDI 404
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
L L A ++++ + GC+ L Y +++ + M L +W +M+E G
Sbjct: 405 ILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKG 464
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
++ +I GLC +LE A + +E L KG P ++S L L+ ++ A
Sbjct: 465 VLPCMHMFSALINGLCFDNRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQ 524
Query: 533 NLFRKIKIARQN 544
+ +++++ R+
Sbjct: 525 EVTQRLEMLRRT 536
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 212/432 (49%), Gaps = 5/432 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
I L + V +S +V +V+ + +G + FF WA + + ++ +++ALG+
Sbjct: 107 IAPVLDALGVTVSPQLVAEVLKNLSNAGILALAFFRWAERQQGFRYSAEGFHNLIEALGK 166
Query: 176 RKFFDFMCNVLSDM-AKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
K F + +++ M + ++ D T I++ + RA +V +A++ ++ FGLK D
Sbjct: 167 IKQFRLVWSLVEAMRCRSCLSKD--TFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLS 224
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
N ++ L + V A ++F MK G+ + ++ TY +++ GW ++ ++ V +E
Sbjct: 225 DYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLKAVYQE 284
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
++ G PD + + LI ++G+ D+AI+VF M+E GC P + Y +I+ S+
Sbjct: 285 MLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMER 344
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
DE +KY++ + T +I ++ + A ++ +EM GI P+T T
Sbjct: 345 LDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDI 404
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
L L A ++++ + GC+ L Y +++ + M L +W +M+E G
Sbjct: 405 ILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKG 464
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
++ +I GLC +LE A + +E L KG P ++S L L+ ++ A
Sbjct: 465 VLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQ 524
Query: 533 NLFRKIKIARQN 544
+ +++++ R+
Sbjct: 525 EVTQRLEMLRRT 536
>gi|224111364|ref|XP_002315827.1| predicted protein [Populus trichocarpa]
gi|222864867|gb|EEF01998.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 200/418 (47%), Gaps = 15/418 (3%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L + ++L+ D+V V+ R + + FF WA N + + +YN ++ L
Sbjct: 16 LEKTLDQLGLELTTDLVLNVLGRLHFEEKTSFRFFMWAGHQKNYSHEPCAYNEMIDILTS 75
Query: 176 RKF----FDFMCNVLSDMAKEGVNP-DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLK 230
K+ F +C++L M + N +E L ++ ++ + +Q + + +K
Sbjct: 76 TKYKARQFRIVCDMLDYMKRNNKNVVPVEVLLTILRNYTE--KYLTRVQKFAKKKRIRVK 133
Query: 231 FDAE--SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMER 288
E + N++L LC+ A LF +K KV + TYN++ GW ++ +
Sbjct: 134 TQPEINAFNLLLDALCKCCLAEDAEGLFKRVKNKVKPDANTYNVMFFGWCRVRNPTRGMK 193
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC---GPDTNAYNAVIS 345
VL+E++ G +PDS T+ I+ RAG +++A E+F+ M+ KG P Y +I
Sbjct: 194 VLEEMIQLGHTPDSFTYITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTAKTYAIMIG 253
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+ DEC K + M + C P++ T+ LI G+ + K+ +A +EM ++G P
Sbjct: 254 ALVRNNRMDECFKLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEAYRFLQEMGNKGYPP 313
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
T FL+ LC A+ +Y++ + GC S+ + +L+ G + W
Sbjct: 314 DIVTYNCFLKVLCENKNSEEALRLYERMIEAGCFPSVQTHNMLISMFFEMGDPDGAFETW 373
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+EM + G D + Y +I GL ++E+A ++E+ + KG +L Y K + L+
Sbjct: 374 YEMDKRGCAQDVDTYIVMIDGLFGCNKVEDACFLIEDIVNKGM---KLPYQKFDSFLM 428
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 125/267 (46%), Gaps = 4/267 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D +YNV+ R + VL +M + G PD T +D+F RAG V +A
Sbjct: 168 VKPDANTYNVMFFGWCRVRNPTRGMKVLEEMIQLGHTPDSFTYITAIDAFCRAGMVNEAA 227
Query: 219 QMLGRLEDFGLKFD---AESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVI 274
++ + G A++ +++ L + + L M L +V T+ +I
Sbjct: 228 ELFEFMRTKGSTMSSPTAKTYAIMIGALVRNNRMDECFKLLEDMINSGCLPDVSTFKELI 287
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G G++ E R L+E+ +G+ PD +T++ ++ L ++A+ +++ M E GC
Sbjct: 288 EGMCSAGKIDEAYRFLQEMGNKGYPPDIVTYNCFLKVLCENKNSEEALRLYERMIEAGCF 347
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P +N +IS + +GD D + + M C ++DTY +I GL KV DA +
Sbjct: 348 PSVQTHNMLISMFFEMGDPDGAFETWYEMDKRGCAQDVDTYIVMIDGLFGCNKVEDACFL 407
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYG 421
E+++++G+ SFL L G
Sbjct: 408 IEDIVNKGMKLPYQKFDSFLMQLSVIG 434
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 136/329 (41%), Gaps = 17/329 (5%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDM------AKEGVNPDLETLSIVMDSFIRAGQVY 215
++ ++N+++ AL + C + D K V PD T +++ + R
Sbjct: 137 EINAFNLLLDALCK-------CCLAEDAEGLFKRVKNKVKPDANTYNVMFFGWCRVRNPT 189
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFN--VMTYN 271
+ +++L + G D+ + + C+ V A+ LF M KG + + TY
Sbjct: 190 RGMKVLEEMIQLGHTPDSFTYITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTAKTYA 249
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
I+I + ++ E ++L++++ G PD TF LIEG+ AG+ID+A M K
Sbjct: 250 IMIGALVRNNRMDECFKLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEAYRFLQEMGNK 309
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G PD YN + + +E ++ Y+ M C P++ T+ LIS + A
Sbjct: 310 GYPPDIVTYNCFLKVLCENKNSEEALRLYERMIEAGCFPSVQTHNMLISMFFEMGDPDGA 369
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
E + EM RG T ++ L A + + G KL + L +
Sbjct: 370 FETWYEMDKRGCAQDVDTYIVMIDGLFGCNKVEDACFLIEDIVNKGMKLPYQKFDSFLMQ 429
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
LS G + L M+ PS Y
Sbjct: 430 LSVIGNIRAIHRLSEHMRTFHNPSMARRY 458
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 185/352 (52%), Gaps = 1/352 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + G P+L T +V++ + G + A +L ++E ++ D N ++ LC+ H
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 200
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
V A +LF M+ K + NV+TY+ +IS G+ + ++L +++ + +P+ +TF+
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI+ + G+ +A ++ D M ++ PD YN++I+ + D+ + ++ M S +
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 320
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
C P++DTY LI G KS++V D E+F EM RG+V T T T+ ++ L G A
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 380
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++K+ G + Y +LL L GK L+++ MQ+S D IY +I G+
Sbjct: 381 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 440
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
C G++++ + KG P+ + Y+ + + L + L+ AY L +K+K
Sbjct: 441 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 183/388 (47%), Gaps = 5/388 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PN+ +Y V+V L +R D N+L+ M + D+ + ++DS + V
Sbjct: 147 QPNLV----TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 202
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVI 274
A+ + +E G++ + + + ++ CLC AS L + M + K+ N++T+N +I
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 262
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+ K G+ VE E++ +++ PD T++ LI G R+D A ++F+ M K C
Sbjct: 263 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD + YN +I + ++ + ++ MS + TYT LI GL +A +V
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F++M+ G+ P T + L+ LC+ G A+ ++ +K KL + Y ++ +
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK DL+ + G + Y +I+GLC+ L+ A ++++ G P
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Query: 515 YSKLSNKLLASNKLESAYNLFRKIKIAR 542
Y+ L L ++ L R+++ R
Sbjct: 503 YNTLIRAHLRDGDKAASAELIREMRSCR 530
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 170/360 (47%), Gaps = 8/360 (2%)
Query: 144 EAMVLFFNWAIK--HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
+A+ LF K PNV +Y+ ++ L + +LSDM ++ +NP+L T
Sbjct: 203 DALNLFKEMETKGIRPNVV----TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 258
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+ ++D+F++ G+ +A ++ + + D + N ++ C + A +F M
Sbjct: 259 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 318
Query: 262 KVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
K F ++ TYN +I G+ K +V + + +E+ G D++T++ LI+GL G D+
Sbjct: 319 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 378
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A +VF M G PD Y+ ++ + G ++ ++ + M + ++ YT +I
Sbjct: 379 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 438
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
G+ K+ KV D ++F + +G+ P+ T + + LCS A + KK ++ G
Sbjct: 439 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 498
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
Y L+R G +L EM+ + D ++A + + G+L+ + L M
Sbjct: 499 DSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKSFLDM 557
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 124/308 (40%), Gaps = 35/308 (11%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N+ TYNI+I+ + + Q+ +L +++ G+ P +T S L+ G RI DA+ +
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 103
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M E G PDT + +I E + M C+PN+ TY +++GL K
Sbjct: 104 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 163
Query: 386 -----------------------------------RKVADALEVFEEMLDRGIVPSTGTI 410
R V DAL +F+EM +GI P+ T
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+S + LCSYG A + + +L + L+ GK L +M +
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
D Y +I G C +L+ A + E + K P Y+ L S ++E
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 531 AYNLFRKI 538
LFR++
Sbjct: 344 GTELFREM 351
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 110/236 (46%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P F+ L+ + + + D I + + M+ G + YN +I+ + +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
M EP++ T + L++G ++++DA+ + ++M++ G P T T T+ + L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
+ A+ + + + GC+ +L Y +++ L G + +L ++M+ + +D I
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ +I LC +++A+ + +E KG P+ + YS L + L + + A L
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 77/173 (44%)
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P++ + +L+S + K +K + + E+M GI + T + C A+ +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
K K+G + S+ LL + + L +M E GY D + +I GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+ AV +++ +++G P+ + Y + N L ++ A+NL K++ A+
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 194/413 (46%), Gaps = 6/413 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E +L + +S +V +V+ R G + FF WA + P +SY+++V LG
Sbjct: 61 LELSLTTYSSHISTTLVEQVLKRCKNLGFSAQRFFLWAKRIPGFDHSKESYHILVDILGS 120
Query: 176 RKFFDFMCNVLSDMAKEG---VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
K F + + L ++ + ++P + +V ++ RA AI+ R+ +FGLK
Sbjct: 121 SKQFALLWDFLIEIRESQDFEISP--QVFWLVFRAYSRANLPSDAIRAFDRMVEFGLKPT 178
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
+ L+ +L+ LC+R H A +F+ +K + TY+I++ GW +G+ V +V E
Sbjct: 179 IDDLDQLLYVLCKRKHAKHAQQIFDRVKHQFQTRAKTYSILVRGWGDIGESVSACKVFDE 238
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+ + + D L ++ L+E + G++ +A ++F M G PD ++ I Y D
Sbjct: 239 MREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEAND 298
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
+ M Y+ PN+ TY +I L K KV +A ++ E+++R P + +
Sbjct: 299 IHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNA 358
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
L C + ++A + + K C +Y +LL+ L G+ +++W M E G
Sbjct: 359 ILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKLLIRVGRFDRAIEVWESMGEKG 418
Query: 473 YPSDGEIYEYVIAGLC-NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+ Y ++ GLC G+LE A E + +G P L N+L+
Sbjct: 419 FYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPPYSSTVEILRNRLIG 471
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 185/352 (52%), Gaps = 1/352 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + G P+L T +V++ + G + A +L ++E ++ D N ++ LC+ H
Sbjct: 140 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 199
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
V A +LF M+ K + NV+TY+ +IS G+ + ++L +++ + +P+ +TF+
Sbjct: 200 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 259
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI+ + G+ +A ++ D M ++ PD YN++I+ + D+ + ++ M S +
Sbjct: 260 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 319
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
C P++DTY LI G KS++V D E+F EM RG+V T T T+ ++ L G A
Sbjct: 320 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 379
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++K+ G + Y +LL L GK L+++ MQ+S D IY +I G+
Sbjct: 380 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 439
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
C G++++ + KG P+ + Y+ + + L + L+ AY L +K+K
Sbjct: 440 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 491
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 183/388 (47%), Gaps = 5/388 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PN+ +Y V+V L +R D N+L+ M + D+ + ++DS + V
Sbjct: 146 QPNLV----TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 201
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVI 274
A+ + +E G++ + + + ++ CLC AS L + M + K+ N++T+N +I
Sbjct: 202 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 261
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+ K G+ VE E++ +++ PD T++ LI G R+D A ++F+ M K C
Sbjct: 262 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 321
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD + YN +I + ++ + ++ MS + TYT LI GL +A +V
Sbjct: 322 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 381
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F++M+ G+ P T + L+ LC+ G A+ ++ +K KL + Y ++ +
Sbjct: 382 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 441
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK DL+ + G + Y +I+GLC+ L+ A ++++ G P
Sbjct: 442 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 501
Query: 515 YSKLSNKLLASNKLESAYNLFRKIKIAR 542
Y+ L L ++ L R+++ R
Sbjct: 502 YNTLIRAHLRDGDKAASAELIREMRSCR 529
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 170/360 (47%), Gaps = 8/360 (2%)
Query: 144 EAMVLFFNWAIK--HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
+A+ LF K PNV +Y+ ++ L + +LSDM ++ +NP+L T
Sbjct: 202 DALNLFKEMETKGIRPNVV----TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 257
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+ ++D+F++ G+ +A ++ + + D + N ++ C + A +F M
Sbjct: 258 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 317
Query: 262 KVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
K F ++ TYN +I G+ K +V + + +E+ G D++T++ LI+GL G D+
Sbjct: 318 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 377
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A +VF M G PD Y+ ++ + G ++ ++ + M + ++ YT +I
Sbjct: 378 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 437
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
G+ K+ KV D ++F + +G+ P+ T + + LCS A + KK ++ G
Sbjct: 438 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 497
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
Y L+R G +L EM+ + D ++A + + G+L+ + L M
Sbjct: 498 DSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKSFLDM 556
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 126/273 (46%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+++T + +++G+ ++ + ++ ++V G+ PD++TF+ LI GL + +A+ +
Sbjct: 78 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 137
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M ++GC P+ Y V++ GD D M + E ++ + +I L K
Sbjct: 138 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 197
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
R V DAL +F+EM +GI P+ T +S + LCSYG A + + +L +
Sbjct: 198 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 257
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ GK L +M + D Y +I G C +L+ A + E +
Sbjct: 258 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 317
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
K P Y+ L S ++E LFR++
Sbjct: 318 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 350
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 109/225 (48%), Gaps = 2/225 (0%)
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC--MKYYKGMSSYNCEP 370
G+ ++DDAI +F M + P +N ++S + FD + M EP
Sbjct: 18 GKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEP 77
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
++ T + L++G ++++DA+ + ++M++ G P T T T+ + L + A+ +
Sbjct: 78 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 137
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
+ + GC+ +L Y +++ L G + +L ++M+ + +D I+ +I LC
Sbjct: 138 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 197
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+++A+ + +E KG P+ + YS L + L + + A L
Sbjct: 198 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 242
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 80/192 (41%), Gaps = 37/192 (19%)
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK--VADALEVFEEMLDRGIVPSTGTI 410
D+ + + GM P++ + +L+S + K +K + +L + +M+ G PS T+
Sbjct: 23 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTL 82
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+S L C H +R+S + L +M E
Sbjct: 83 SSLLNGYC-----HG------------------------KRISD------AVALVDQMVE 107
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
GY D + +I GL + AV +++ +++G P+ + Y + N L ++
Sbjct: 108 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 167
Query: 531 AYNLFRKIKIAR 542
A+NL K++ A+
Sbjct: 168 AFNLLNKMEAAK 179
>gi|226509960|ref|NP_001150456.1| LOC100284086 [Zea mays]
gi|195639404|gb|ACG39170.1| ATP binding protein [Zea mays]
Length = 634
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 200/431 (46%), Gaps = 2/431 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E AL ++ L VV V++R + FF WA +Y ++ LG+
Sbjct: 181 LEAALSALSPPLCEAVVLAVLHRFKHAHRPSYRFFRWATVSGGFTHTTITYCKMLHILGK 240
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ F+ M ++ +M K G ++ + + SF AG++ A+ + + G ES
Sbjct: 241 TRQFESMVAMIQEMGKAGAL-SMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVES 299
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
N +L L + A +F+ M G+ ++ +Y ++ W +VE RV E++
Sbjct: 300 FNCLLVALAKEGLGREARQVFDKMHGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLE 359
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+G PD + + +IEGL R R +A+++F+ MK KG P+ Y +I ++ G D
Sbjct: 360 KGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDM 419
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
M+ ++ M C+P++ TYT L+ G ++++ V EEM +G P T + ++
Sbjct: 420 AMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIK 479
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR-LSGFGKCGMLLDLWHEMQESGYP 474
L + P A +YKK K G + ++ Y ++++ G M +W EM + G
Sbjct: 480 LLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQRGIC 539
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
D Y I G+ E A +EE + KG ++ Y+K + + K + + L
Sbjct: 540 PDVNSYTVFINRHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKFAADFSKAGKPDILFEL 599
Query: 535 FRKIKIARQND 545
+K+K A + D
Sbjct: 600 AQKVKFAGKLD 610
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 184/379 (48%), Gaps = 3/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN ++ L + V S M G+ PD+ T +I++ + RA Q+ AI M+
Sbjct: 175 DAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMM 234
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSK 279
+ +GL D ++ ++ + ++ A + M G NV T N+++ G+ K
Sbjct: 235 EEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNV-TVNVLVHGYCK 293
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G++ E+ + E+ EGF PD TF+ L+ GL R G + A+E+ D M ++G PD
Sbjct: 294 EGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFT 353
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YN++I +G+ +E ++ M + PN TY LIS L K +V +A E+ +
Sbjct: 354 YNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLT 413
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
+GI+P T S ++ LC AM ++++ + GC Y +L+ L G+
Sbjct: 414 SKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLE 473
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
L L EM+ SG + Y +I G C ++E A + +E +G + + Y+ L
Sbjct: 474 EALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLI 533
Query: 520 NKLLASNKLESAYNLFRKI 538
+ L + ++E A L ++
Sbjct: 534 DGLCKNRRVEEAAQLMDQM 552
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 183/408 (44%), Gaps = 12/408 (2%)
Query: 136 VNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKAL----GRRKFFDFMCNVLSDMAK 191
+ GN++G I+ VA S NV V L + + + + + +M+
Sbjct: 257 IEEGNMNGA-------LRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSN 309
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
EG PD T + +++ R G V A+++L + G D + N +++ LC+ V
Sbjct: 310 EGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEE 369
Query: 252 ASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A + N M + N +TYN +IS K QV E + + + ++G PD TF+ LI+
Sbjct: 370 AVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 429
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
GL A+E+F+ MK KGC PD YN +I + S G +E + K M S C
Sbjct: 430 GLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSR 489
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
N+ TY LI G K++++ +A E+F+EM +GI + T + ++ LC A +
Sbjct: 490 NVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLM 549
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
+ G K Y LL G D+ M +G D Y +I GL
Sbjct: 550 DQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKA 609
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G++E A ++ KG + Y+ + L + A LFR++
Sbjct: 610 GRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREM 657
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 178/398 (44%), Gaps = 2/398 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
++++ +WA K PN Y +++ LG+ F M VL +M G T I
Sbjct: 86 DSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLI 145
Query: 204 VMDSFIRAGQVYKAIQMLGRL-EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK 262
+++S+ + +A+ ++ + E+FGLK DA + N +L L + + + M +
Sbjct: 146 LIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSR 205
Query: 263 -VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
+ +V T+NI+I + Q+ +++E+ + G SPD TF+ L++G G ++ A
Sbjct: 206 GIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGA 265
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+ + + M GC N ++ Y G +E + + MS+ P+ T+ L++G
Sbjct: 266 LRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNG 325
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L + V ALE+ + ML G P T S + LC G A+ + + +
Sbjct: 326 LCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPN 385
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
Y L+ L + +L + G D + +I GLC A+ + E
Sbjct: 386 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFE 445
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
E KG P Y+ L + L + +LE A +L ++++
Sbjct: 446 EMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEME 483
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 168/351 (47%), Gaps = 10/351 (2%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ + + +YN ++ L + + + + +G+ PD+ T + ++ A
Sbjct: 381 DFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLA 440
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
+++ ++ G D + N+++ LC R + A SL M+ NV+TYN +I G
Sbjct: 441 MELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDG 500
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K ++ E E + E+ +G S + +T++ LI+GL + R+++A ++ D M +G PD
Sbjct: 501 FCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPD 560
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN++++ + GD + + M+S CEP+ TY LI GL K+ +V A +
Sbjct: 561 KFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLR 620
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL-SGF 455
+ +G+V + T ++ L A+ ++++ + G YK++ R L SG
Sbjct: 621 TVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGG 680
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
G G +D EM + G+ D + + GLC L ME++L K
Sbjct: 681 GPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLC--------ALSMEDTLIK 723
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 190/379 (50%), Gaps = 2/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D K+Y +++ L + + + M K D+ T +++DS + G +A+ M
Sbjct: 111 DAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMF 169
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ G+ D + ++ LC+ + A F M+G+ + +V TYN +I G S+
Sbjct: 170 SEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRA 229
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G E+ L +V GFSPD+ TF+ LI+GL + G++ +A ++ + M KG PD Y
Sbjct: 230 GLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTY 289
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +++ VG ++ K ++ ++ + N+ +Y LI+G K +K+ +A +FEEM
Sbjct: 290 NTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRP 349
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G+ PST T + + LC G A ++ + + G L L+ Y +LL L G
Sbjct: 350 KGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEE 409
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+DL+ ++++ + + E++ ++ G+C G+LE A +E + G P + Y+ L N
Sbjct: 410 AIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILIN 469
Query: 521 KLLASNKLESAYNLFRKIK 539
L L A L +++
Sbjct: 470 GLCNKGMLSEAVKLLWQME 488
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 157/349 (44%)
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
K G PD T++ ++ + A+Q+ + + GL DA++ +++ LC+ G
Sbjct: 70 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129
Query: 251 AASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A L MKG +V TY ++I K G E + E++ G PD + +S L++
Sbjct: 130 LAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMD 189
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
GL R GR+ +A+E F M+ +G D YN++I G + E + M P
Sbjct: 190 GLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP 249
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
+ T+T LI GL K KV +A ++ E M +G P T + + LC G A ++
Sbjct: 250 DAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLF 309
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
+ G KL++ +Y +L+ K L+ EM+ G Y +I LC
Sbjct: 310 ESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQS 369
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G++ A + E G Y L + L + LE A +LF+ IK
Sbjct: 370 GRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIK 418
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 173/350 (49%), Gaps = 1/350 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ DV +YN ++ L R + + L+ M G +PD T +I++D + G+V +A
Sbjct: 212 ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQ 271
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
Q+L + G + D + N ++ LC + A+ LF S+ + + NV +YNI+I+G+
Sbjct: 272 QILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGY 331
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K ++ E R+ +E+ +G P ++T++ LI L ++GR+ A ++F M+ G
Sbjct: 332 CKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKL 391
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+ Y ++ G +E + ++ + +PN++ ++ L+ G+ ++ K+ +A + F+E
Sbjct: 392 STYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDE 451
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ G+ P T + LC+ G A+ + + + GC + ++++ L +
Sbjct: 452 ISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENE 511
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
+ L EM+ + D + ++ Q A++ + +L+KG
Sbjct: 512 IHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKG 561
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 170/398 (42%), Gaps = 38/398 (9%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N DV +Y +I+ +L + ++ S+M G+ PD+ S +MD R G++ +A
Sbjct: 141 NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEA 200
Query: 218 IQMLGRLE-----------------------------------DFGLKFDAESLNVVLWC 242
++ +E D G DA + +++
Sbjct: 201 LEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDG 260
Query: 243 LCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
LC+ VG A + M KGK +++TYN +++G +GQ+ + ++ + + G
Sbjct: 261 LCKEGKVGEAQQILELMHHKGKEP-DILTYNTLMNGLCLVGQLEDATKLFESLADRGIKL 319
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
+ +++ LI G + +ID+A +F+ M+ KG P T YN +I G K +
Sbjct: 320 NVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLF 379
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
M + + TY L+ GL K+ + +A+++F+ + P+ + L+ +C
Sbjct: 380 VEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRA 439
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
G A + + K G + AY +L+ L G + L +M+E G D +
Sbjct: 440 GKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITF 499
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+I L ++ A+ ++EE + F P V S L
Sbjct: 500 NVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML 537
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/119 (20%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ LF +IK +++ +++++ + R + +++K G+ PD +I
Sbjct: 409 EAIDLF--QSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNI 466
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK 262
+++ G + +A+++L ++E+ G D+ + NV++ L + + A L M+ +
Sbjct: 467 LINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNR 525
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 205/413 (49%), Gaps = 2/413 (0%)
Query: 115 VIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALG 174
V++ AL + +S +VV V+NR +G FF W+ K + V++Y++++++
Sbjct: 86 VLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTA 145
Query: 175 RRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
+ + + M ++++ M K+ + ++ET IVM + RA +V +AI +E + L +
Sbjct: 146 KIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLV 204
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
+ N +L LC+ +V A +F +M+ + + TY+I++ GW K + + V +E++
Sbjct: 205 AFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMI 264
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
G PD +T+S +++ L +AGR+D+A+ + +M C P T Y+ ++ Y + +
Sbjct: 265 DAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLE 324
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E + + M + ++ + LI K+ ++ + V +EM +G+ P++ + L
Sbjct: 325 EAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL 384
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
L G A +++K KV C+ Y ++++ + +W M++ G
Sbjct: 385 RHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF 443
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
+ +I GLC + A +++EE + G PS + + +L L+ +
Sbjct: 444 PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER 496
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 187/375 (49%), Gaps = 2/375 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D K+Y +++ L + + + M K D+ T +++D+ + G +A+ M
Sbjct: 1050 DAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDALCKDGMTTEALDMF 1108
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ G+ D + ++ LC+ + A F M+G+ + +V TYN +I G S+
Sbjct: 1109 SEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRA 1168
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G E+ L +V GFSPD+ TF+ LI+GL + G++ +A ++ + M+ KG PD Y
Sbjct: 1169 GLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTY 1228
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +++ VG ++ K ++ ++ + N+ +Y LI+G K +K+ +A FEEM
Sbjct: 1229 NTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRP 1288
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G+ PST T + + LC G A ++ + + G L L+ Y +LL L G
Sbjct: 1289 KGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEE 1348
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+DL+ ++++ + + E++ ++ G+C G+LE A +E + G P + Y+ L N
Sbjct: 1349 AMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILIN 1408
Query: 521 KLLASNKLESAYNLF 535
L L A L
Sbjct: 1409 GLCNKGMLSEAVKLL 1423
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 155/349 (44%)
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
K G PD T++ ++ + A+Q+ + GL DA++ +++ LC+ G
Sbjct: 1009 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTG 1068
Query: 251 AASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A L MKG +V TY ++I K G E + E++ G PD + +S L++
Sbjct: 1069 LAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMD 1128
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
GL R GR+ +A+E F M+ +G D YN++I G + E + M P
Sbjct: 1129 GLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP 1188
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
+ T+T LI GL K KV +A ++ E M +G P T + + LC G A ++
Sbjct: 1189 DAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLF 1248
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
+ G KL++ +Y +L+ K + EM+ G Y +I LC
Sbjct: 1249 ESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQS 1308
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G++ A + E G Y L + L + LE A +LF+ IK
Sbjct: 1309 GRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIK 1357
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 172/350 (49%), Gaps = 1/350 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ DV +YN ++ L R + + L+ M G +PD T +I++D + G+V +A
Sbjct: 1151 ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQ 1210
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
Q+L + G + D + N ++ LC + A+ LF S+ + + NV +YNI+I+G+
Sbjct: 1211 QILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGY 1270
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K ++ E R +E+ +G P ++T++ LI L ++GR+ A ++F M+ G
Sbjct: 1271 CKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKL 1330
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+ Y ++ G +E M ++ + +PN++ ++ L+ G+ ++ K+ +A + F+E
Sbjct: 1331 STYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDE 1390
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ G+ P T + LC+ G A+ + + + GC + ++++ L +
Sbjct: 1391 ISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENE 1450
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
+ L EM+ + D + ++ Q A++ + +L+KG
Sbjct: 1451 IHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKG 1500
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 169/398 (42%), Gaps = 38/398 (9%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N DV +Y +I+ AL + ++ S+M G+ PD+ S +MD R G++ +A
Sbjct: 1080 NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEA 1139
Query: 218 IQMLGRLE-----------------------------------DFGLKFDAESLNVVLWC 242
++ +E D G DA + +++
Sbjct: 1140 LEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDG 1199
Query: 243 LCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
LC+ VG A + M KGK +++TYN +++G +GQ+ + ++ + + G
Sbjct: 1200 LCKEGKVGEAQQILELMRHKGKEP-DILTYNTLMNGLCLVGQLEDATKLFESLADRGIKL 1258
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
+ +++ LI G + +ID+A F+ M+ KG P T YN +I G K +
Sbjct: 1259 NVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLF 1318
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
M + + TY L+ GL K+ + +A+++F+ + P+ + L+ +C
Sbjct: 1319 VEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRA 1378
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
G A + + K G + AY +L+ L G + L +M+E G D +
Sbjct: 1379 GKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITF 1438
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+I L ++ A+ ++EE + F P V S L
Sbjct: 1439 NVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML 1476
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 172/401 (42%), Gaps = 4/401 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF P D ++N ++ ++ + ++ + + + G+ PDL TL+I
Sbjct: 929 DAIKLFDRSLCSEPMPCTD--TFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNI 986
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
++ V + G G + DA ++ ++ + + A LF+ M K
Sbjct: 987 LIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKG 1046
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+L + TY I+I+G K + + L E + D T+ +I+ L + G +A+
Sbjct: 1047 LLGDAKTYGILINGLCK-ARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEAL 1105
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
++F M G PD Y++++ G E ++++K M ++ TY LI GL
Sbjct: 1106 DMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGL 1165
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
++ + M+DRG P T T ++ LC G A + + R G + +
Sbjct: 1166 SRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDI 1225
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L+ L G+ L+ + + G + Y +I G C +++ A EE
Sbjct: 1226 LTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEE 1285
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
KG PS + Y+ L L S ++ +A LF +++ Q
Sbjct: 1286 MRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQ 1326
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EAM LF +IK +++ +++++ + R + +++K G+ PD +I
Sbjct: 1348 EAMDLF--QSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNI 1405
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK 262
+++ G + +A+++L ++E+ G D+ + NV++ L + + A L M+ +
Sbjct: 1406 LINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNR 1464
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 60/153 (39%)
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
K+ DA+++F+ L +P T T L + G MY+K VG + L
Sbjct: 926 KLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLN 985
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
+L+ G ++ + G+ D ++ G+ + +AV + +E +K
Sbjct: 986 ILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKK 1045
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G Y L N L + K A L K+K
Sbjct: 1046 GLLGDAKTYGILINGLCKARKTGLAIKLHEKMK 1078
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 190/411 (46%), Gaps = 2/411 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E +L + +S ++V +V+ R N G + FF WA P V S++++V+ LG
Sbjct: 64 LELSLNPFSAQISTNLVDQVLKRCNNLGFSAHRFFLWAKSIPGFQHSVMSFHILVEILGS 123
Query: 176 RKFFDFMCNVLSDMAKE-GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
K F + + L +M + E ++ ++ +A AI+ R+++FG+K
Sbjct: 124 CKQFAILWDFLIEMRGSCHYEINSEIFWLIFRAYSQANLPDGAIRSFNRMDEFGIKPTIN 183
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
+ +L+ LC+ HV A F+ K + L TY+I+ISGW +G + + + ++
Sbjct: 184 DFDKLLFILCKTKHVKQAQQFFDQAKNRFLLTAKTYSILISGWGDIGDSEKAHELFQAML 243
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
+G D L ++ L++ L + G +D+A +F M K PD Y+ I +Y D
Sbjct: 244 EQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQ 303
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
++ M YN PN+ TY +I L K+ V +A + +EM+ RG+ P T + +
Sbjct: 304 SALRVLDKMRRYNILPNVFTYNCIIKRLCKNEHVEEAYLLLDEMISRGVRPDTWSYNAIQ 363
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
C + + A+ + + K C Y ++L+ L G+ + +W M + +
Sbjct: 364 AYHCDHCEVNRAIRLMFRMEKDNCLPDRHTYNMVLKLLIRIGRFDKVTKVWGNMGDKKFY 423
Query: 475 SDGEIYEYVIAGLC-NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
Y +I G C G+LE A E + +G P L N+LL
Sbjct: 424 PSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEMLRNQLLG 474
>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 190/398 (47%), Gaps = 3/398 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E +L + +S D+V +V+ R N G + FF WA P V+S++++V+ LGR
Sbjct: 60 LELSLTPFSTQISTDLVEQVLKRCNHLGFSAHRFFLWAKSIPGFQHSVQSFHILVEILGR 119
Query: 176 RKFFDFMCNVLSDMAKEGVNPDL--ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA 233
K F + + L + + + + E I+ ++ RA AI+ R+++FG+K
Sbjct: 120 SKQFAILWDFLIETRESDSSCKITNEIFWIIFTAYSRADLPDGAIRSFVRMDEFGIKPSI 179
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
++++L+ LC++ HV A F+ +K L TY+I+I+GW K+G + + +
Sbjct: 180 IDVDLLLYTLCKKKHVRQAQQFFDQVKSHFLLTTKTYSILINGWGKIGDSGKARELFDAM 239
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+ +G D L ++ L+E L + G +D+A++ + M K PD Y+ I +Y +
Sbjct: 240 LEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSIFIRSYCDANNV 299
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
M N PN+ TY +I L K +KV +A ++ +EM+ G+ P T + +
Sbjct: 300 HSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSGLKPDTWSYNAI 359
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
C + + A+ + + K C Y ++L+ L G+ ++W M + +
Sbjct: 360 QAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIGRFDKATEVWECMGDKKF 419
Query: 474 PSDGEIYEYVIAGLC-NIGQLENAVLVMEESLRKGFCP 510
Y +I GLC G+LE A + +G P
Sbjct: 420 YPSVSTYSVMIHGLCKKKGKLEEACKYFAMMIDEGIPP 457
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 206/437 (47%), Gaps = 3/437 (0%)
Query: 98 PEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHP 157
PE + + ++L + ++ + +V ++ R G + FF HP
Sbjct: 27 PEATTLAALILNSTNSQTLAESLHSPSIQWTPQLVNTILKRLWNHGPKALHFFKILSHHP 86
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ S++ + R + F + ++S M + P T +I+ + + G+ ++A
Sbjct: 87 SYCHQASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAIIAERYAAMGKPHRA 146
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGW 277
+ + + ++G D S N +L LC+ V A +LF ++KGK + ++YNI+++GW
Sbjct: 147 VTVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGKFKADCVSYNIIVNGW 206
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ + + +LKE+V G +P+ T++ ++ G RAG+ ++A F MK++ C D
Sbjct: 207 CLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDV 266
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +VI VG+ + M P++ T+ LI L K V +A+ +FEE
Sbjct: 267 VTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEE 326
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ RG VP++ T + LC G AM + ++ C+ ++ Y +L+R G+
Sbjct: 327 MVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGE 386
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLC---NIGQLENAVLVMEESLRKGFCPSRLV 514
LDL+ +M + + Y +I + N L A ++ E + +GF P +L
Sbjct: 387 IEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGFLPRKLT 446
Query: 515 YSKLSNKLLASNKLESA 531
++++ + LL + + A
Sbjct: 447 FNRVLDGLLLTGNQDFA 463
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 112/242 (46%), Gaps = 1/242 (0%)
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
P TF+ + E G+ A+ VF +M E GC D +++N ++ +
Sbjct: 123 LGPSPRTFAIIAERYAAMGKPHRAVTVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAY 182
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+K + + + +Y +++G ++ ALE+ +EM++RG+ P+ T L
Sbjct: 183 NLFKALKG-KFKADCVSYNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGY 241
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
G + A + + +K C + + Y ++ L G+ +++++M + G
Sbjct: 242 FRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSV 301
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
+ +I LC +ENA+L+ EE +++G+ P+ + Y+ + L +++ A L +
Sbjct: 302 ATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMER 361
Query: 538 IK 539
++
Sbjct: 362 ME 363
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 113/235 (48%), Gaps = 16/235 (6%)
Query: 104 GVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDV 163
G FL+ K K I D + +V L VVG++ N+ FN +K V V
Sbjct: 252 GFFLEMKKRKCDI-DVVTYTSVIHGLGVVGEIKRARNV--------FNQMVKD-GVLPSV 301
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
++N +++ L ++ + + +M K G P+ T ++V+ G++ +A++++ R
Sbjct: 302 ATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMER 361
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW---SK 279
+ED + + ++ N+++ C + LF M G L N+ TYNI+I+
Sbjct: 362 MEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRKN 421
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
++ ++L E+V GF P LTF+ +++GL G D A E+ + GCG
Sbjct: 422 SDNLLVAGKLLVEMVDRGFLPRKLTFNRVLDGLLLTGNQDFAKEILSL--QGGCG 474
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 198/386 (51%), Gaps = 11/386 (2%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HP DV +Y ++ AL L +MA + P++ T ++++D + G+V
Sbjct: 43 HP----DVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVD 98
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVI 274
+A+ +L ++ + A + N ++ LC+ A L M + ++ TY +I
Sbjct: 99 EAVALLSKMRKKCVP-TAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLI 157
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG-C 333
+G+ K + + RV +++VA GF PD +T+S LI+GL + GR+ +AI++F M + G C
Sbjct: 158 TGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSC 217
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
P+T YN++IS + +G DE M + M+ P++ TYT L++G K ++ DA +
Sbjct: 218 MPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYD 277
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+ +M +G+ P T TS ++ LC A+ + + R+ C ++ Y +L
Sbjct: 278 LLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL---D 334
Query: 454 GFGKCGMLLDLWHEM-QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G+ + L + M +E P + + +I GLC + + A+ ++EE+ R+ P
Sbjct: 335 GYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDV 394
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKI 538
++Y+ + + L K++ A ++RK+
Sbjct: 395 VMYTTVIDGLCREKKVDEACRVYRKM 420
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 151/327 (46%), Gaps = 46/327 (14%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y ++ + K D V + G PD+ T S ++D + G++ +AI +
Sbjct: 149 DIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLF 208
Query: 222 GRLEDFGLKF-DAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSK 279
GR+ G + + N ++ C+ + A +L M + +V+TY +++G+ K
Sbjct: 209 GRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCK 268
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
L ++ + +L ++ +G +PD +TF+ L++GL R R+ DA+ + M+ K C P
Sbjct: 269 LARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYT 328
Query: 340 YNAVISNYISVGDFDECMKYY-----------------KGMSSYN--------------- 367
YN ++ Y +E K+ +G+ N
Sbjct: 329 YNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRR 388
Query: 368 -CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR-GIVPSTGTITSFLEPLCSYGPPHA 425
C P++ YT +I GL + +KV +A V+ +ML+ G +P++ T ++ + LC+ G
Sbjct: 389 RCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAG---- 444
Query: 426 AMMMYKKAR---KVGCKLSLTAYKLLL 449
M +AR + GC ++ Y LL+
Sbjct: 445 ---MLDRARGYIEKGCVPNIGTYNLLI 468
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 123/263 (46%), Gaps = 8/263 (3%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F IK + + +YN ++ R D N+L MA+ G +PD+ T + +M+ F
Sbjct: 207 LFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGF 266
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NV 267
+ ++ A +L ++ GL D + ++ LC+ + A + M+ K V
Sbjct: 267 CKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTV 326
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
TYN ++ G+ + Q+ E + + E + P+ ++F+ +I GL + R +A+E+ +
Sbjct: 327 YTYNTILDGYCRANQLEEARKFMLEEM--DCPPNVVSFNIMIRGLCKVNRSSEAMELVEE 384
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDE-CMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
+ + C PD Y VI DE C Y K + C PN TY+ LI+GL
Sbjct: 385 ARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCN-- 442
Query: 387 KVADALEVFEEMLDRGIVPSTGT 409
A L+ +++G VP+ GT
Sbjct: 443 --AGMLDRARGYIEKGCVPNIGT 463
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 35/281 (12%)
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+ S D +T++ LI+GL + R++ A+ M KG PD Y AVI
Sbjct: 2 VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLI--------------------------------- 379
E K+ + M++ N PN+ TYT LI
Sbjct: 62 LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSL 121
Query: 380 -SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
SGL K+ + ++A ++ EEM+ G +P T T+ + C A+ ++++ G
Sbjct: 122 ISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGF 181
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI-YEYVIAGLCNIGQLENAV 497
+ + Y L+ L G+ +DL+ M +SG + Y +I+G C +G+++ A+
Sbjct: 182 RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAM 241
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++E G P + Y+ L N +L+ AY+L ++
Sbjct: 242 NLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM 282
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 183/381 (48%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV +YN I+ AL + + D VL+ M K GV PD T + ++ + +GQ +AI
Sbjct: 227 ILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI 286
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
L ++ G++ D + ++++ LC+ A +F+SM + L + TY ++ G+
Sbjct: 287 GFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGY 346
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G +VEM +L +V G PD FS LI + G++D A+ VF M+++G P+
Sbjct: 347 ATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNA 406
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y AVI G ++ M Y++ M P Y LI GL K A E+ E
Sbjct: 407 VTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 466
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
MLDRGI +T S ++ C G + +++ ++G K ++ Y L+ GK
Sbjct: 467 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGK 526
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+ L M G + Y +I G C I ++E+A+++ +E G P + Y+
Sbjct: 527 MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 586
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ L + + +A L+ +I
Sbjct: 587 ILQGLFQTRRTAAAKELYVRI 607
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 171/390 (43%), Gaps = 43/390 (11%)
Query: 189 MAKEG---VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE----------- 234
MA+ G V PDL T I++ RAG++ LG + G + DA
Sbjct: 75 MARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 134
Query: 235 -------------------------SLNVVLWCLCQRLHVGAASSLFNSMK----GKVLF 265
S N++L LC A L + M G
Sbjct: 135 DKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPP 194
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V++Y VI+G+ K G + E++ G PD +T++ +I L +A +D A+EV
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL 254
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+TM + G PD YN+++ Y S G E + + K M S EP++ TY+ L+ L K+
Sbjct: 255 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKN 314
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+ +A ++F+ M RG+ P T + L+ + G + + G +
Sbjct: 315 GRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVF 374
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+L+ + GK + ++ +M++ G + Y VI LC G++E+A+L E+ +
Sbjct: 375 SILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 434
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+G P +VY+ L + L NK E A L
Sbjct: 435 EGLSPGNIVYNSLIHGLCTCNKWERAEELI 464
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 156/340 (45%), Gaps = 5/340 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HP D +++++ A ++ D V S M ++G+NP+ T V+ ++G+V
Sbjct: 368 HP----DHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
A+ ++ D GL N ++ LC A L M + + N + +N +I
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
K G+V+E E++ + +V G P+ +T++ LI G AG++D+A+++ M G
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+T Y+ +I+ Y + ++ + +K M S P++ TY ++ GL ++R+ A A E+
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 603
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ + + G T L LC A+ M++ + KL + +++ L
Sbjct: 604 YVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLK 663
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G+ DL+ +G + Y + + G LE
Sbjct: 664 VGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 164/379 (43%), Gaps = 5/379 (1%)
Query: 162 DVKSYNVIVKAL-GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
D ++ ++K L ++ D M VL M + G P++ + +I++ + +A+++
Sbjct: 121 DAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALEL 180
Query: 221 LGRLED---FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
L + D G D S V+ + A S ++ M + +L +V+TYN +I+
Sbjct: 181 LHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAA 240
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K + + VL +V G PD +T++ ++ G +G+ +AI M+ G PD
Sbjct: 241 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y+ ++ G E K + M+ +P + TY L+ G + + + +
Sbjct: 301 VVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 360
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
M+ GI P + + G AM+++ K R+ G + Y ++ L G
Sbjct: 361 LMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ + + +M + G +Y +I GLC + E A ++ E L +G C + + ++
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480
Query: 517 KLSNKLLASNKLESAYNLF 535
+ + ++ + LF
Sbjct: 481 SIIDSHCKEGRVIESEKLF 499
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ +M GV+PD+ T +I++ + + A ++ R+ + G + + + N++L LC
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 627
Query: 245 QRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ A +F ++ L T+NI+I K+G+ E + + + G P+
Sbjct: 628 KNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYW 687
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
T+ + E + G +++ ++F +M++ GC D+ N ++ + G+ Y
Sbjct: 688 TYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTY 743
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 84/189 (44%), Gaps = 3/189 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+VLF ++ V+ D+ +YN+I++ L + + + + + G +L T +I
Sbjct: 564 DALVLF--KEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++ + A+QM L LK +A + N+++ L + A LF +
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
L N TY ++ G + E++++ + G + DS +F++ L + G I A
Sbjct: 682 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAG 741
Query: 323 EVFDTMKEK 331
+ EK
Sbjct: 742 TYLSMIDEK 750
>gi|225431703|ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial [Vitis vinifera]
gi|296088528|emb|CBI37519.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 206/447 (46%), Gaps = 12/447 (2%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
+ LQ +E +L + LS +V + + R + + FF WA + + DV
Sbjct: 59 ILLQHHNPFHAMESSLQLNGIALSTHLVHQTLLRLRNVSKIALSFFLWAKDQAHHSHDVV 118
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SYN+I+ L + + FD + +M + + P T I++ + AG +A++ +
Sbjct: 119 SYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAFDDM 178
Query: 225 EDFGLK-FDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQV 283
F K D++ +L L + +V AS +FN K K N Y I+I GW K+ +V
Sbjct: 179 SCFVEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKINRV 238
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG----------RIDDAIEVFDTMKEKGC 333
ER+L E+V G + +T++ L+ G+ R I DA +V D M++KG
Sbjct: 239 SIAERLLGEMVERGIEANVVTYNVLLNGICRRASLHPDDRFERTIRDAEKVLDEMRQKGI 298
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
PD +Y+ VI Y + + + M P + TYT ++ L ++ DA E
Sbjct: 299 EPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEE 358
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR-KVGCKLSLTAYKLLLRRL 452
+ +M+ G+ PS T F + A+ +Y+K + + C + Y +L+
Sbjct: 359 LVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMF 418
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
+ ++ ++W +M+ SG D + Y +I GLC + + A E + KG+ P +
Sbjct: 419 VKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQK 478
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + L L+ S+ L++ L +K++
Sbjct: 479 ITFETLYRGLIQSDMLKTWRRLKKKLE 505
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 198/386 (51%), Gaps = 11/386 (2%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HP DV +Y ++ AL L +MA + P++ T ++++D + G+V
Sbjct: 43 HP----DVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVD 98
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVI 274
+A+ +L ++ + A + N ++ LC+ A L M + ++ TY +I
Sbjct: 99 EAVALLSKMRKKCVP-TAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLI 157
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG-C 333
+G+ K + + RV +++VA GF PD +T+S LI+GL + GR+ +AI++F M + G C
Sbjct: 158 TGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSC 217
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
P+T YN++IS + +G DE M + M+ P++ TYT L++G K ++ DA +
Sbjct: 218 MPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYD 277
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+ +M +G+ P T TS ++ LC A+ + + R+ C ++ Y +L
Sbjct: 278 LLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL---D 334
Query: 454 GFGKCGMLLDLWHEM-QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G+ + L + M +E P + + +I GLC + + A+ ++EE+ R+ P
Sbjct: 335 GYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDV 394
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKI 538
++Y+ + + L K++ A ++RK+
Sbjct: 395 VMYTTVIDGLCREKKVDEACRVYRKM 420
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 151/327 (46%), Gaps = 46/327 (14%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y ++ + K D V + G PD+ T S ++D + G++ +AI +
Sbjct: 149 DIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLF 208
Query: 222 GRLEDFGLKF-DAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSK 279
GR+ G + + N ++ C+ + A +L M + +V+TY +++G+ K
Sbjct: 209 GRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCK 268
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
L ++ + +L ++ +G +PD +TF+ L++GL R R+ DA+ + M+ K C P
Sbjct: 269 LARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYT 328
Query: 340 YNAVISNYISVGDFDECMKYY-----------------KGMSSYN--------------- 367
YN ++ Y +E K+ +G+ N
Sbjct: 329 YNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRR 388
Query: 368 -CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR-GIVPSTGTITSFLEPLCSYGPPHA 425
C P++ YT +I GL + +KV +A V+ +ML+ G +P++ T ++ + LC+ G
Sbjct: 389 RCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAG---- 444
Query: 426 AMMMYKKAR---KVGCKLSLTAYKLLL 449
M +AR + GC ++ Y LL+
Sbjct: 445 ---MLDRARGYIEKGCVPNIGTYNLLI 468
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 123/263 (46%), Gaps = 8/263 (3%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F IK + + +YN ++ R D N+L MA+ G +PD+ T + +M+ F
Sbjct: 207 LFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGF 266
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NV 267
+ ++ A +L ++ GL D + ++ LC+ + A + M+ K V
Sbjct: 267 CKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTV 326
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
TYN ++ G+ + Q+ E + + E + P+ ++F+ +I GL + R +A+E+ +
Sbjct: 327 YTYNTILDGYCRANQLEEARKFMLEEM--DCPPNVVSFNIMIRGLCKVNRSSEAMELVEE 384
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDE-CMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
+ + C PD Y VI DE C Y K + C PN TY+ L++GL
Sbjct: 385 ARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCN-- 442
Query: 387 KVADALEVFEEMLDRGIVPSTGT 409
A L+ +++G VP+ GT
Sbjct: 443 --AGMLDRARGYIEKGCVPNIGT 463
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 35/281 (12%)
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+ S D +T++ LI+GL + R++ A+ M KG PD Y AVI
Sbjct: 2 VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLI--------------------------------- 379
E K+ + M++ N PN+ TYT LI
Sbjct: 62 LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSL 121
Query: 380 -SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
SGL K+ + ++A ++ EEM+ G +P T T+ + C A+ ++++ G
Sbjct: 122 ISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGF 181
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI-YEYVIAGLCNIGQLENAV 497
+ + Y L+ L G+ +DL+ M +SG + Y +I+G C +G+++ A+
Sbjct: 182 RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAM 241
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++E G P + Y+ L N +L+ AY+L ++
Sbjct: 242 NLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM 282
>gi|356560497|ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Glycine max]
Length = 490
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 207/415 (49%), Gaps = 11/415 (2%)
Query: 125 VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCN 184
+ LS D+V +++ R ++ + F WA P+ +SY+++V LGR K + + +
Sbjct: 71 IPLSRDLVHRLLWRYKDDWKSALGVFRWASSRPSFRHSSESYDMMVDILGRMKVMEKLRD 130
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+L +M +EG ++ T++ M F+ AGQ A+++ L+ GL+ + ES+N++L LC
Sbjct: 131 LLEEM-REGGLVNMNTVAKAMRRFVGAGQWVDAVRIFDDLQALGLEKNTESMNLLLDTLC 189
Query: 245 QRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
+ V A +F +K + N T+NI I GW K+ +V E ++E+ GF P ++
Sbjct: 190 KEKFVQQAREIFLELKQHIAPNAHTFNIFIHGWCKICRVDEAHWTIQEMKGYGFHPCVIS 249
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
+S LI+ + G E+ D M+ +GC + Y +++ F+E +K + M
Sbjct: 250 YSTLIQCYCQEGNFSRVYELLDEMQAQGCSANVITYTSIMCALGKAKKFEEALKVPERMR 309
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFE-EMLDRGIVPSTGTITSFLEPLCSYGPP 423
S C P+ + LI L ++ ++ DA +VF+ EM G+ P+T T S + C +
Sbjct: 310 SSGCRPDTLFFNSLIHTLGRAGRLDDAADVFKVEMPKAGVSPNTSTYNSMISMFCYHAQE 369
Query: 424 HAAMMMYKKARKV-GCKLSLTAYKLLLRRLSGFGKC-GMLLDLWHEMQESGYPS-DGEIY 480
A+ + K+ GCK Y L++ GK G+L ++ ++M + S D Y
Sbjct: 370 KRALEILKEMENSGGCKPDAQTYHPLIKSCFRSGKIDGVLSEILNDMINKQHLSLDLSTY 429
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCP----SRLVYSKLSNKLL--ASNKLE 529
+I GLC + A + EE + + P RL+ ++ K + A+ K+E
Sbjct: 430 TLLIHGLCREDRCNWAFSLFEEMIDQDIIPRYRTCRLLLDEVKQKNMYQAAEKIE 484
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/467 (25%), Positives = 215/467 (46%), Gaps = 10/467 (2%)
Query: 93 DEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNW 152
DEF E++ + + +E AL V + + +V++R +G F++W
Sbjct: 86 DEFASDVEKVYRILRKYHSRVPKLELALRESGVVVRPGLTERVLSRCGDAGNLAYRFYSW 145
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL---ETLSIVMDSFI 209
A K D +Y ++K L R + F + ++ +M +E NP L + I+M F
Sbjct: 146 ASKQSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQE--NPHLITPQVFVILMRRFA 203
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMT 269
A V+KA+++L + +G + D +L LC+ V A+SLF M+ + +V
Sbjct: 204 SARMVHKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRYRWKPSVKH 263
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
+ ++ GW K G+++E + VL ++ G PD + ++ L+ G +AG++ DA ++ M+
Sbjct: 264 FTSLLYGWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMR 323
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
K C P+ +Y +I + +E + + M + C+ ++ TY+ LISG K K+
Sbjct: 324 RKRCEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISGFCKWGKIK 383
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
E+ +EM+ +G P+ + + + +K+GC L+ Y ++
Sbjct: 384 RGYELLDEMIQQGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVI 443
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF- 508
R G+ + LW+EM+ SG + + +I G G L A +E + +G
Sbjct: 444 RLACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEACEYFKEMVGRGLF 503
Query: 509 -CPSRLVYSKLSNKLLASNKLE---SAYNLFRKIKIARQNDYARRLW 551
P +L N LL + KLE A+N K + N A +W
Sbjct: 504 TAPQYGTLKELMNSLLRAEKLEMAKDAWNCITASKGCQLNVSAWTIW 550
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/342 (19%), Positives = 136/342 (39%), Gaps = 75/342 (21%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
+VL M G+ PD+ + ++ + +AG++ A +L + + +A S V++ L
Sbjct: 282 HVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEPNATSYTVLIQSL 341
Query: 244 CQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C+ + A+ LF M+ +V+TY+ +ISG+ K G++ +L E++ +G P+
Sbjct: 342 CKHERLEEATRLFVEMQTNGCQADVVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQ 401
Query: 303 LTFSFLI-------------------EGLGRA----------------GRIDDAIEVFDT 327
+ + ++ + +G A G + + I++++
Sbjct: 402 VIYQHIMLAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGIQLWNE 461
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM------------------------ 363
M+ G P + + +I+ ++ G E +Y+K M
Sbjct: 462 MESSGLSPGMDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFTAPQYGTLKELMNSLLRA 521
Query: 364 --------------SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
+S C+ N+ +T I L V +A +M+D+ ++P+ T
Sbjct: 522 EKLEMAKDAWNCITASKGCQLNVSAWTIWIHALFSKGHVKEACSFCIDMMDKDLMPNPDT 581
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+ L A + +K RK+ +T +K+ RR
Sbjct: 582 FAKLMHGLKKLYNRQFAAEITEKVRKMAADRQIT-FKMYKRR 622
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 113/276 (40%), Gaps = 39/276 (14%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+ SY V++++L + + + + +M G D+ T S ++ F + G++ + ++L
Sbjct: 330 NATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISGFCKWGKIKRGYELL 389
Query: 222 -----------------------------------GRLEDFGLKFDAESLNVVLWCLCQR 246
++ G D N V+ C+
Sbjct: 390 DEMIQQGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKL 449
Query: 247 LHVGAASSLFNSMKGKVLFNVM-TYNIVISGWSKLGQVVEMERVLKEIVAEGF--SPDSL 303
V L+N M+ L M T+ I+I+G+ + G +VE KE+V G +P
Sbjct: 450 GEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFTAPQYG 509
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMK-EKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
T L+ L RA +++ A + ++ + KGC + +A+ I S G E +
Sbjct: 510 TLKELMNSLLRAEKLEMAKDAWNCITASKGCQLNVSAWTIWIHALFSKGHVKEACSFCID 569
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
M + PN DT+ +L+ GL K A E+ E++
Sbjct: 570 MMDKDLMPNPDTFAKLMHGLKKLYNRQFAAEITEKV 605
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 196/406 (48%), Gaps = 6/406 (1%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+V+ ++ + DV S+N+++K F + + K G PD+ T S ++
Sbjct: 95 LVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLL 154
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVL 264
+V +A+ + ++ + + + ++ LC+ V A +L + M + +
Sbjct: 155 HGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQ 210
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVA-EGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
N +TY ++ G K+G V +L+++ P+ + +S +I+GL + GR DA
Sbjct: 211 PNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHN 270
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
++ M+EKG PD YN +I + S G + E + + M PN+ TY+ LI+ +
Sbjct: 271 LYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYV 330
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
K RK +A E+++EML RGI+P+T T S ++ C AA M+ GC +
Sbjct: 331 KERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVF 390
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
+ L+ G + +L HEM E+G +D Y +I G C +G L A+ + ++
Sbjct: 391 TFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQM 450
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYARR 549
+ G CP + + L + L + KL+ A +F+ ++ ++ + A R
Sbjct: 451 ISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASR 496
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 191/434 (44%), Gaps = 53/434 (12%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
++ +V Y+ I+ L + N+ ++M ++G+ PDL T + ++D F +G+ +A
Sbjct: 244 HIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEA 303
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
++L + + + + + + ++ + A L++ M + ++ N +TYN +I G
Sbjct: 304 QRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDG 363
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K ++ E + + +G SPD TF+ LI+G A RIDD E+ M E G D
Sbjct: 364 FCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVAD 423
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGM-SSYNC--------------------------- 368
T YN +I + VGD + + + M SS C
Sbjct: 424 TTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 483
Query: 369 ------------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
EP++ TY LISGL+ K +A E+++EM RGIVP+T T
Sbjct: 484 AMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITY 543
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHE 467
+S + LC A M+ + + L +SG+ K G + L+L+ E
Sbjct: 544 SSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTL---VSGYCKAGRVDDGLELFCE 600
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
M G +D Y +I G +G + A+ + +E + G P + + L + +
Sbjct: 601 MGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEE 660
Query: 528 LESAYNLFRKIKIA 541
L+ A + ++++
Sbjct: 661 LKRAVAMLEDLQMS 674
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 138/282 (48%), Gaps = 14/282 (4%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
+F+ A K + DV ++N ++ K D +L +M + G+ D T + ++
Sbjct: 376 MFYVMATK--GCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHG 433
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL--- 264
F G + A+ + ++ G+ D + N +L LC + A +F +M+ +
Sbjct: 434 FCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 493
Query: 265 ----FN-----VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
FN V TYNI+ISG G+ +E E + KE+ G P+++T+S +I GL +
Sbjct: 494 ASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQ 553
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
R+D+A ++FD+M K PD +N ++S Y G D+ ++ + M + TY
Sbjct: 554 SRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITY 613
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
LI G K + AL++F+EM+ G+ P T TI S L L
Sbjct: 614 ITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVL 655
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 216/480 (45%), Gaps = 70/480 (14%)
Query: 128 SLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLS 187
S +VV ++ G+ A +F++ + V+ V ++ V++KAL D C++L
Sbjct: 172 SYNVVLDILVDGDCPRVAPNVFYDMLSR--GVSPTVYTFGVVMKALCMVSEVDSACSLLR 229
Query: 188 DMAKEGV-----------------------------------NPDLETLSIVMDSFIRAG 212
DMAK G PD++T + V+ RAG
Sbjct: 230 DMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAG 289
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK--VLFNVM-- 268
++++A ++L R+ G DA + ++ LC+ V A +L N + VL+N +
Sbjct: 290 RIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLIS 349
Query: 269 -----------------------------TYNIVISGWSKLGQVVEMERVLKEIVAEGFS 299
T+NI+I G K G +V +L E+VA+ F
Sbjct: 350 GYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFE 409
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P+ +T++ LI G + GR+++A E+ ++M KG +T YN +I G+ +E ++
Sbjct: 410 PNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQL 469
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ MS C+P++ T+ LI+GL K+ K+ +AL ++ +M G++ +T T + +
Sbjct: 470 FGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLM 529
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
A + + GC L Y L++ L G L L+ EM G
Sbjct: 530 RDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIIS 589
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I+GLC G++ +A+ +++ + +G P + Y+ L N L ++ A NLF K++
Sbjct: 590 CNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQ 649
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 173/372 (46%), Gaps = 6/372 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVL-SDMAKEGVNPDLETLSIVMDSFIRAG 212
I +PN YN ++ F+ ++L ++M G PD T +I++D ++ G
Sbjct: 336 IPNPNTVL----YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKG 391
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYN 271
+ A+++L + + + + +++ C++ + A+ + NSM K L N + YN
Sbjct: 392 YLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYN 451
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I K G + E ++ E+ +G PD TF+ LI GL + ++++A+ ++ M +
Sbjct: 452 CLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLE 511
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G +T YN ++ ++ + K M C + TY LI L K+ V
Sbjct: 512 GVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKG 571
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
L +FEEML +GI P+ + + LC G + A+ + G + Y L+
Sbjct: 572 LGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLING 631
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L G +L++++Q G D Y +I+ C+ G +A L++ + + GF P+
Sbjct: 632 LCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPN 691
Query: 512 RLVYSKLSNKLL 523
+ +S L N ++
Sbjct: 692 EVTWSILINYIV 703
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 106/254 (41%), Gaps = 1/254 (0%)
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
ME + +G+S LI+ LG G ++ MK++G + + ++
Sbjct: 83 MELFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMK 142
Query: 346 NYISVGDFDECMKYYKGM-SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+Y G + + M Y+C+P +Y ++ L+ A VF +ML RG+
Sbjct: 143 HYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVS 202
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P+ T ++ LC +A + + K GC + Y+ L+ L + L L
Sbjct: 203 PTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQL 262
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+M D + + VI GLC G++ A +++ L +GF L Y L + L
Sbjct: 263 LEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCR 322
Query: 525 SNKLESAYNLFRKI 538
+++ A L KI
Sbjct: 323 MGQVDEARALLNKI 336
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 112/266 (42%), Gaps = 7/266 (2%)
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE-VFDTMKE 330
++I +G +E++LK++ EG F +++ G+AG A + D
Sbjct: 104 LLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGV 163
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECM-KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
C P +YN V+ + GD + M S P + T+ ++ L +V
Sbjct: 164 YSCDPTFKSYNVVLDILVD-GDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVD 222
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
A + +M G VP++ + + LC A+ + + + C+ + + ++
Sbjct: 223 SACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVI 282
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
L G+ L M G+ +D Y Y++ GLC +GQ++ A L K
Sbjct: 283 HGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEA----RALLNKIPN 338
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLF 535
P+ ++Y+ L + +AS + E A +L
Sbjct: 339 PNTVLYNTLISGYVASGRFEEAKDLL 364
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 205/413 (49%), Gaps = 2/413 (0%)
Query: 115 VIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALG 174
V++ AL + +S +VV V+NR +G FF W+ K + V++Y++++++
Sbjct: 50 VLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTA 109
Query: 175 RRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
+ + + M ++++ M K+ + ++ET IVM + RA +V +AI +E + L +
Sbjct: 110 KIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLV 168
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
+ N +L LC+ +V A +F +M+ + + TY+I++ GW K + + V +E++
Sbjct: 169 AFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMI 228
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
G PD +T+S +++ L +AGR+D+A+ + +M C P T Y+ ++ Y + +
Sbjct: 229 DAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLE 288
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E + + M + ++ + LI K+ ++ + V +EM +G+ P++ + L
Sbjct: 289 EAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL 348
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
L G A +++K KV C+ Y ++++ + +W M++ G
Sbjct: 349 RHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF 407
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
+ +I GLC + A +++EE + G PS + + +L L+ +
Sbjct: 408 PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER 460
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 182/381 (47%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV +YN I+ AL + + D VL+ M K GV PD T + ++ + +GQ +AI
Sbjct: 227 ILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI 286
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
L ++ G++ D + ++++ LC+ A +F+SM + L + TY ++ G+
Sbjct: 287 GFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGY 346
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G +VEM +L +V G PD FS LI G++D A+ VF M+++G P+
Sbjct: 347 ATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNA 406
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y AVI G ++ M Y++ M P Y LI GL K A E+ E
Sbjct: 407 VTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 466
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
MLDRGI +T S ++ C G + +++ ++G K ++ Y L+ GK
Sbjct: 467 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGK 526
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+ L M G + Y +I G C I ++E+A+++ +E G P + Y+
Sbjct: 527 MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 586
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ L + + +A L+ +I
Sbjct: 587 ILQGLFQTRRTAAAKELYVRI 607
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 171/390 (43%), Gaps = 43/390 (11%)
Query: 189 MAKEG---VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE----------- 234
MA+ G V PDL T I++ RAG++ LG + G + DA
Sbjct: 75 MARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 134
Query: 235 -------------------------SLNVVLWCLCQRLHVGAASSLFNSMK----GKVLF 265
S N++L LC A L + M G
Sbjct: 135 DKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPP 194
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V++Y VI+G+ K G + E++ G PD +T++ +I L +A +D A+EV
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL 254
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+TM + G PD YN+++ Y S G E + + K M S EP++ TY+ L+ L K+
Sbjct: 255 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKN 314
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+ +A ++F+ M RG+ P T + L+ + G + + G +
Sbjct: 315 GRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVF 374
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+L+ + GK + ++ +M++ G + Y VI LC G++E+A+L E+ +
Sbjct: 375 SILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 434
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+G P +VY+ L + L NK E A L
Sbjct: 435 EGLSPGNIVYNSLIHGLCTCNKWERAEELI 464
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 155/340 (45%), Gaps = 5/340 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HP D +++++ A + D V S M ++G+NP+ T V+ ++G+V
Sbjct: 368 HP----DHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
A+ ++ D GL N ++ LC A L M + + N + +N +I
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
K G+V+E E++ + +V G P+ +T++ LI G AG++D+A+++ M G
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+T Y+ +I+ Y + ++ + +K M S P++ TY ++ GL ++R+ A A E+
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 603
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ + + G T L LC A+ M++ + KL + +++ L
Sbjct: 604 YVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLK 663
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G+ DL+ +G + Y + + G LE
Sbjct: 664 VGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 165/379 (43%), Gaps = 5/379 (1%)
Query: 162 DVKSYNVIVKAL-GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
D ++ ++K L ++ D M VL M + G P++ + +I++ + +A+++
Sbjct: 121 DAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALEL 180
Query: 221 LGRLED---FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
L + D G D S V+ + A S ++ M + +L +V+TYN +I+
Sbjct: 181 LHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAA 240
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K + + VL +V G PD +T++ ++ G +G+ +AI M+ G PD
Sbjct: 241 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y+ ++ G E K + M+ +P + TY L+ G + + + +
Sbjct: 301 VVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 360
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
M+ GI P + + + G AM+++ K R+ G + Y ++ L G
Sbjct: 361 LMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ + + +M + G +Y +I GLC + E A ++ E L +G C + + ++
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480
Query: 517 KLSNKLLASNKLESAYNLF 535
+ + ++ + LF
Sbjct: 481 SIIDSHCKEGRVIESEKLF 499
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ +M GV+PD+ T +I++ + + A ++ R+ + G + + + N++L LC
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 627
Query: 245 QRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ A +F ++ L T+NI+I K+G+ E + + + G P+
Sbjct: 628 KNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYW 687
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
T+ + E + G +++ ++F +M++ GC D+ N ++ + G+ Y
Sbjct: 688 TYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTY 743
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 84/189 (44%), Gaps = 3/189 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+VLF ++ V+ D+ +YN+I++ L + + + + + G +L T +I
Sbjct: 564 DALVLF--KEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++ + A+QM L LK +A + N+++ L + A LF +
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
L N TY ++ G + E++++ + G + DS +F++ L + G I A
Sbjct: 682 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAG 741
Query: 323 EVFDTMKEK 331
+ EK
Sbjct: 742 TYLSMIDEK 750
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 202/428 (47%), Gaps = 5/428 (1%)
Query: 113 KGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKA 172
+ ++E + V+ LS D G V+ R + A+ F++WA P + + + N ++ A
Sbjct: 47 QALLERSHAAVSTKLSRDTFGGVLGRLRCTCNALG-FYHWAATRPGFSHTLFTRNSLLLA 105
Query: 173 LGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
L R + + L P++ + +I++ F +L ++ G+ +
Sbjct: 106 LVRG---GHLSDALGFFQSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSN 162
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLK 291
+ V+L LC R + A S FNS+ K + TY +++ G K +V V +
Sbjct: 163 GATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFE 222
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
E++ +G+ PD + +S LI+GL +AGR+D+A ++ D M +G P AY ++++ G
Sbjct: 223 EMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCG 282
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
E +K + M P +DTY+ +++G + KV A V EEM DR P T + T
Sbjct: 283 RIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYT 342
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
F+E L S G A +++ + GCK + Y +++ G + M ++
Sbjct: 343 MFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKA 402
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
+ IY ++ G +LE A+ + + L+ G PS + Y+ + N L K++ A
Sbjct: 403 AVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEA 462
Query: 532 YNLFRKIK 539
L R+++
Sbjct: 463 LELLREMQ 470
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 184/389 (47%), Gaps = 39/389 (10%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y V+V L + + C+V +M ++G PD+ S ++D +AG+V +A +++ +
Sbjct: 200 TYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLM 259
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN-VMTYNIVISGWSKLGQV 283
G A + ++ LC+ + A M+ + L V TY+ +++G+ +G+V
Sbjct: 260 VARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKV 319
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ V++E+ +PD+++++ IE L GR ++A +VF+TM EKGC PD + Y +
Sbjct: 320 EKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGII 379
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I N+ G + M +PN YT ++ G +KS ++ +ALE+++ +L GI
Sbjct: 380 IDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGI 439
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYK--KARKVGCKLSLTAYKL-------------- 447
+PST T + + LC A+ + + + RK + S+ Y +
Sbjct: 440 LPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERA 499
Query: 448 ---------------------LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
L++ L+G GK ++L EM ++G D Y ++
Sbjct: 500 FDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQI 559
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVY 515
LC ++ A +++E +R G P+ +
Sbjct: 560 LCR-SDVDAAWDLLQEMMRNGHTPNEFTF 587
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 205/466 (43%), Gaps = 84/466 (18%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FF +I PNV+ S+N++++ R F+ + +L +M G+ + T +++ +
Sbjct: 118 FFQSSISEPNVS----SFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSAL 173
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNV 267
+ KA+ + + + V++ LC+ V A +F M K ++
Sbjct: 174 CARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDI 233
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE---- 323
+ Y+ +I G SK G+V E +++ +VA G P ++ ++ ++ GL + GRI +A++
Sbjct: 234 IAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQE 293
Query: 324 -------------------------------VFDTMKEKGCGPDTNAYNAVISNYISVGD 352
V + M ++ C PDT +Y I S+G
Sbjct: 294 MRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGR 353
Query: 353 FDECMKYYKGMSSYNCEPNMDT-----------------------------------YTR 377
+E K ++ M C+P+M T YT
Sbjct: 354 REEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTM 413
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK--KARK 435
++ G +KS ++ +ALE+++ +L GI+PST T + + LC A+ + + + RK
Sbjct: 414 IMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRK 473
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGM---LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+ S+ Y +++ G GK GM DL EM ++G D Y +I L G+
Sbjct: 474 EELEPSIVTYSMIIH---GLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGK 530
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ A+ ++EE L+ G P Y L ++L + +++A++L +++
Sbjct: 531 VSRAMELLEEMLKAGIFPDDHTYGTLV-QILCRSDVDAAWDLLQEM 575
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 123/258 (47%), Gaps = 10/258 (3%)
Query: 158 NVAKDVKSYNVIVKAL---GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV 214
+ A D SY + ++AL GRR+ + V M ++G PD+ T I++D+F + G +
Sbjct: 333 DCAPDTISYTMFIEALYSIGRREEAE---KVFETMVEKGCKPDMHTYGIIIDNFCKEGSM 389
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS-MKGKVLFNVMTYNIV 273
A +L ++ +K + +++ + + A L+ +K +L + +TYN V
Sbjct: 390 AAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTV 449
Query: 274 ISGWSKLGQVVEMERVLKEIV--AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
I+ KL ++ E +L+E+ E P +T+S +I GLG+ G + A ++ M +
Sbjct: 450 INALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDN 509
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G PD Y ++I G M+ + M P+ TY L+ L +S V A
Sbjct: 510 GVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAA 568
Query: 392 LEVFEEMLDRGIVPSTGT 409
++ +EM+ G P+ T
Sbjct: 569 WDLLQEMMRNGHTPNEFT 586
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 4/224 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y +I+ + +VL M K V P+ +++MD F+++ ++ +A+++
Sbjct: 372 DMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELY 431
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM---KGKVLFNVMTYNIVISGWS 278
R+ G+ + N V+ LC+ + A L M K ++ +++TY+++I G
Sbjct: 432 QRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLG 491
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K+G +L E++ G PD T++ LI+ L AG++ A+E+ + M + G PD +
Sbjct: 492 KVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDH 551
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
Y ++ + D D + M PN T+ + G
Sbjct: 552 TYGTLV-QILCRSDVDAAWDLLQEMMRNGHTPNEFTFKAVEKGF 594
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ L + + + +Y++I+ LG+ + ++L++M GV PD T +
Sbjct: 461 EALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTS 520
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
++ + AG+V +A+++L + G+ D + ++ LC R V AA L M
Sbjct: 521 LIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILC-RSDVDAAWDLLQEM 575
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 178/375 (47%), Gaps = 1/375 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+ N++V + + FD V+S+M K V PD+ T ++++D+ RAG V AI ++ +
Sbjct: 159 TLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ GLK + N VL LC+ A +F +M + V +V ++NI+I G+ ++G+V
Sbjct: 219 ANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEV 278
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E + KE+ G +PD ++FS LI G++D A MK G PD Y V
Sbjct: 279 EEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMV 338
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I + G E ++ M C P++ TY L++GL K ++ DA E+ EM +RG+
Sbjct: 339 IGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGV 398
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P T T+ + C G A+ ++ + + AY L+ + G +
Sbjct: 399 TPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANE 458
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
LW +M + Y +I C GQ+E A ++E + KG P+ + Y+ +
Sbjct: 459 LWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYC 518
Query: 524 ASNKLESAYNLFRKI 538
S ++ +K+
Sbjct: 519 RSGNVKKGQQFLQKM 533
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 192/441 (43%), Gaps = 55/441 (12%)
Query: 96 LLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIK 155
++ E R VF + +I+ +VD ++ +V + N+G G
Sbjct: 179 VISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPG------------ 226
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
+ ++N ++K L + + FD V M + V PD+ + +I++ F R G+V
Sbjct: 227 -------IVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVE 279
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVI 274
+A++ ++ G+ D S + ++ R + A++ MKG L + + Y +VI
Sbjct: 280 EAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVI 339
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ + G + E RV E+V G PD +T++ L+ GL + R+ DA E+ + MKE+G
Sbjct: 340 GGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVT 399
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD + +I Y G+F++ ++ + + P++ Y LI G+ + +A A E+
Sbjct: 400 PDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANEL 459
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+++M R I P+ T + ++ C G A
Sbjct: 460 WDDMHAREIFPNHVTYSILIDSHCEKGQVEEA---------------------------- 491
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
FG LD EM G + Y +I G C G ++ +++ ++ P +
Sbjct: 492 FG----FLD---EMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLIT 544
Query: 515 YSKLSNKLLASNKLESAYNLF 535
++ L + + + A+N+F
Sbjct: 545 FNTLIHGYIKEENMHGAFNVF 565
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 150/311 (48%), Gaps = 9/311 (2%)
Query: 230 KFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMER 288
+ +A +LN+++ C+ L A ++ + M+ + +F +V+T+N++I + G V
Sbjct: 154 EVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIA 213
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
++ + +G P +TF+ +++GL + R D A EVF M + PD ++N +I +
Sbjct: 214 LVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFC 273
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR-KVADALEVFEEMLDRGIVPST 407
VG+ +E MK+YK M P++ +++ LI GL +R K+ A EM G+VP
Sbjct: 274 RVGEVEEAMKFYKEMQQRGVTPDVVSFSCLI-GLFSTRGKMDHAAAYLREMKGLGLVPDG 332
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---L 464
T + C G A+ + + +GC + Y L L+G K LLD L
Sbjct: 333 VIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTL---LNGLCKQHRLLDAEEL 389
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+EM+E G D + +I G C G E A+ + + L + P + Y+ L + +
Sbjct: 390 LNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCR 449
Query: 525 SNKLESAYNLF 535
L A L+
Sbjct: 450 KGDLAKANELW 460
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 159/338 (47%), Gaps = 45/338 (13%)
Query: 104 GVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDV 163
+L+++KG G++ D + + V+G G++S EA L + DV
Sbjct: 317 AAYLREMKGLGLVPDGV------IYTMVIGGFCRAGSMS-EA--LRVRDEMVGLGCLPDV 367
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+YN ++ L ++ +L++M + GV PDL T + ++ + R G KA+Q+
Sbjct: 368 VTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDT 427
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF------------------ 265
L L+ D + N ++ +C++ + A+ L++ M + +F
Sbjct: 428 LLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQ 487
Query: 266 ------------------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
N+MTYN +I G+ + G V + ++ L++++ + PD +TF+
Sbjct: 488 VEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNT 547
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI G + + A VF+ M+++ PD YN +I+ + G+ +E + +K M +
Sbjct: 548 LIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASG 607
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
EP+ TY LI+G + + +A ++ +EM+ RG P
Sbjct: 608 IEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAP 645
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 112/265 (42%), Gaps = 5/265 (1%)
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+GW L E + +++ ++ T + ++ ++ D A V M+++
Sbjct: 135 AGWPHLA-----EEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVF 189
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD +N +I GD D + M++ +P + T+ ++ GL K R+ A EV
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEV 249
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F M + P + + C G AM YK+ ++ G + ++ L+ S
Sbjct: 250 FRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFST 309
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK EM+ G DG IY VI G C G + A+ V +E + G P +
Sbjct: 310 RGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVT 369
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
Y+ L N L ++L A L ++K
Sbjct: 370 YNTLLNGLCKQHRLLDAEELLNEMK 394
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 142/363 (39%), Gaps = 36/363 (9%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F ++ V DV S++ ++ R D L +M G+ PD ++V+ F
Sbjct: 284 FYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFC 343
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK------- 262
RAG + +A+++ + G D + N +L LC++ + A L N MK +
Sbjct: 344 RAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLC 403
Query: 263 -------------------VLFN----------VMTYNIVISGWSKLGQVVEMERVLKEI 293
LF+ V+ YN +I G + G + + + ++
Sbjct: 404 TFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDM 463
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
A P+ +T+S LI+ G++++A D M KG P+ YN++I Y G+
Sbjct: 464 HAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNV 523
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
+ ++ + M N P++ T+ LI G +K + A VF M + P T
Sbjct: 524 KKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMI 583
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
+ G A ++KK G + Y L+ G L EM G+
Sbjct: 584 INGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGF 643
Query: 474 PSD 476
D
Sbjct: 644 APD 646
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 101/251 (40%)
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
++ ++A +P F LI ++ + +A E F + + +A NA+++
Sbjct: 74 IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALS 133
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTG 408
G + Y+ + S + E N T ++ KS + A V EM R + P
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193
Query: 409 TITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM 468
T ++ G AA+ + G K + + +L+ L + +++ M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM 253
Query: 469 QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
+ D + +I G C +G++E A+ +E ++G P + +S L K+
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKM 313
Query: 529 ESAYNLFRKIK 539
+ A R++K
Sbjct: 314 DHAAAYLREMK 324
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 188/412 (45%), Gaps = 13/412 (3%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWA----IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVL 186
VV +V+ R + ++FF WA KH + N ++ L D + +
Sbjct: 95 VVSRVLQRLK-DPQTAIVFFVWAGDRGFKHSTFTR-----NCFLQTLLENGSSDRIPAMF 148
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
M G PD T +V+ S + Q+ KA ML + + G K + ++ C+
Sbjct: 149 ERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKT 208
Query: 247 LHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
+ A +F ++ + + YN +I G + LKE+ +PD T++
Sbjct: 209 GRLKDALEIFRNIPSP---DAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYN 265
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
LI+GL +A + D A E+ M ++G PDT +N+++ G F+ M+
Sbjct: 266 ILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAER 325
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
NC P+ TY LISGL K + V A ++ +E + G VP T + + LC G A
Sbjct: 326 NCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEA 385
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ K+ GC +L Y L+ L K +L + SG+ D Y ++ G
Sbjct: 386 FELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDG 445
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
LC G+L+ A+ ++E L++G PS + Y+ L L + +++ A+++F+++
Sbjct: 446 LCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 497
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 195/448 (43%), Gaps = 68/448 (15%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
VA DV +YN+++ L + D +L +M GV PD T + +MD +AG+ +A
Sbjct: 257 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 316
Query: 219 QMLG----------------------------RLEDF-------GLKFDAESLNVVLWCL 243
+L R +D G D + +++ L
Sbjct: 317 SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGL 376
Query: 244 CQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C+R + A L M GK N++TYN +I G K + + +L+ +V+ GF PD
Sbjct: 377 CKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDV 436
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+T++ +++GL + GR+D A+++ + M ++GC P Y A++ G DE +K
Sbjct: 437 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 496
Query: 363 MSSYNCEPNMDTYTRLISGLLKS------RKVADALE----------------------- 393
M S +C + Y L++G KS +KV D +
Sbjct: 497 MVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDE 556
Query: 394 ---VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
VFE+M RG VP+ T ++ LC +G A + GC + +Y +++
Sbjct: 557 IPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIID 616
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
L K + +M ++G P D Y ++A C + ++AV +++ ++ G P
Sbjct: 617 GLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDP 676
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y+ L + L +N+L AY L ++
Sbjct: 677 DNVTYNTLISGLSQTNRLGDAYELMHEM 704
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 181/415 (43%), Gaps = 43/415 (10%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A D +Y++++K+L + D +L G P++ +I+ +F + G++ A++
Sbjct: 157 APDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALE 216
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWS 278
+ + DA + N ++ C++ A M + KV +V TYNI+I G
Sbjct: 217 IFRNIP----SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLC 272
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K + + +L E+V G +PD++TF+ +++GL +AG+ + A + M E+ C P
Sbjct: 273 KASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCC 332
Query: 339 AYNAVIS----------------NYISV-------------------GDFDECMKYYKGM 363
YN +IS ++S G DE + K M
Sbjct: 333 TYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEM 392
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
S C PN+ TY LI GL K+ K A E+ E ++ G VP T T ++ LC G
Sbjct: 393 SGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRL 452
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+ M + K GC S+ Y L+ L G+ ++ EM +D Y +
Sbjct: 453 DKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSL 512
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ G C + + A V+ + +R P VY+ L + +L+ N+F +
Sbjct: 513 VNGYCKSSRTKEAQKVV-DGIRGT--PYIDVYNALMDGYCKEGRLDEIPNVFEDM 564
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 176/409 (43%), Gaps = 38/409 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y +IV L + D ++ M K G P + T + +M+ R G+V +A +
Sbjct: 435 DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF 494
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK------------------- 262
+ DA + ++ C+ A + + ++G
Sbjct: 495 KEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRL 554
Query: 263 --------------VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
+ N+ TYNIV+ G K G+V E L+ + + G PD ++++ +
Sbjct: 555 DEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNII 614
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I+GL +A + +A +V D M + G PD YN +++ + FD+ + K M
Sbjct: 615 IDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGV 674
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG-IVPSTGTITSFLEPLCSYGPPHAAM 427
+P+ TY LISGL ++ ++ DA E+ EML G +V + T + ++ LC G A+
Sbjct: 675 DPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQAL 734
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++ G + + Y + + RL G+ L EM D Y VI GL
Sbjct: 735 LLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTVIIGL 791
Query: 488 CNIGQLENAVLVMEESLR-KGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
C QL+ A + E + KG C + ++ L + + +L+ A L
Sbjct: 792 CKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 840
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 163/358 (45%), Gaps = 15/358 (4%)
Query: 157 PNVAKD---------VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
PNV +D +K+YN+++ L + D L M G PD+ + +I++D
Sbjct: 558 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 617
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFN 266
+A + +A Q+L ++ G+ DA + N ++ C+ A + +M K V +
Sbjct: 618 LFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPD 677
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL-TFSFLIEGLGRAGRIDDAIEVF 325
+TYN +ISG S+ ++ + ++ E++ G + T++ +I+ L + G + A+ +
Sbjct: 678 NVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLM 737
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M G +T YN I G DE M + E +YT +I GL K+
Sbjct: 738 DHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEV---SYTTVIIGLCKA 794
Query: 386 RKVADALEVFEEMLD-RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
++ A ++ EM+ +G+ ++ T ++ A+ + + GC S+
Sbjct: 795 EQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVIT 854
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y +++ L K +L+ EM G + Y +I GLC G+ + A+ V+EE
Sbjct: 855 YNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEE 912
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 136/314 (43%), Gaps = 35/314 (11%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV SYN+I+ L + VL M + G+ PD T + +M F + + A+ +L
Sbjct: 607 DVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGIL 666
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSK 279
+ G+ D + N ++ L Q +G A L + M G V+ TYN +I K
Sbjct: 667 KNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCK 726
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA---IEVFDTMKE------ 330
G + + ++ + G +++T++ I+ L + GR+D+A + DT+++
Sbjct: 727 EGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTT 786
Query: 331 ------------------------KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
KG ++ +N +I + DE + M
Sbjct: 787 VIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQR 846
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
C P++ TY +I+ L K KV A E+F+EM RGIV S+ + T + LC G A
Sbjct: 847 GCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEA 906
Query: 427 MMMYKKARKVGCKL 440
+ + ++ C++
Sbjct: 907 LQVLEEMASSDCEI 920
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 39/277 (14%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD--------------------- 197
+ D +YN ++ + + FD +L +M K GV+PD
Sbjct: 639 IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAY 698
Query: 198 ---------------LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWC 242
T + ++D + G + +A+ ++ + G++ + + N+ +
Sbjct: 699 ELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDR 758
Query: 243 LCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA-EGFSPD 301
LC+ + ASSL + M L + ++Y VI G K Q+ ++ +E+VA +G
Sbjct: 759 LCKEGRLDEASSLLSEMD--TLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCIT 816
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
S TF+ LI+ + R+D+A+ + M ++GC P YN VI+ + D+ + +
Sbjct: 817 SHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFD 876
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
M+ + +YT LI GL + +AL+V EEM
Sbjct: 877 EMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 118/298 (39%), Gaps = 47/298 (15%)
Query: 136 VNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
+++ N G+A L +++ V +YN I+ L + ++ M GV
Sbjct: 688 LSQTNRLGDAYELMHEM-LRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVE 746
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
+ T +I +D + G++ +A +L ++ D S V+ LC+ + AS L
Sbjct: 747 ANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYTTVIIGLCKAEQLDRASKL 803
Query: 256 FNSM---KGKVL----FN------------------------------VMTYNIVISGWS 278
M KG + FN V+TYN+VI+
Sbjct: 804 AREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLC 863
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
KL +V + + E+ G S++++ LI GL GR +A++V + M C D
Sbjct: 864 KLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDL 923
Query: 339 AYNAVISNYISVGDFDECM-KYYKGMSSYNCEPNMDT---YTRLISGL--LKSRKVAD 390
+ V + F C ++ SS C +T + +SGL L ++++ D
Sbjct: 924 KWEDVAPHSQFQTTFGPCYSSFHSRFSSTWCSVPYETNKAHKEFVSGLASLCNKEIPD 981
>gi|147767583|emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
Length = 525
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 205/447 (45%), Gaps = 12/447 (2%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
+ LQ +E +L + LS +V + + R + + FF WA + + DV
Sbjct: 59 ILLQHHNPFHAMESSLQLNGIALSTHLVHQTLLRLRNVSKIALSFFLWAKDQAHHSHDVV 118
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SYN+I+ L + + FD + +M + + P T I++ + AG +A++ +
Sbjct: 119 SYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAFDDM 178
Query: 225 EDFGLK-FDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQV 283
F K D++ +L L + +V AS +FN K K N Y I+I GW K+ +V
Sbjct: 179 SCFVEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKINRV 238
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG----------RIDDAIEVFDTMKEKGC 333
ER+L E+V G + +T++ L+ G+ R I DA +V D M++ G
Sbjct: 239 SIAERLLGEMVERGJXANVVTYNVLLNGICRXASLHPDDRFERTIRDAEKVLDEMRQXGI 298
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
PD +Y+ VI Y + + + M P + TYT ++ L ++ DA E
Sbjct: 299 EPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEE 358
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR-KVGCKLSLTAYKLLLRRL 452
+ +M+ G+ PS T F + A+ +Y+K + + C + Y +L+
Sbjct: 359 LVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMF 418
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
+ ++ ++W +M+ SG D + Y +I GLC + + A E + KG+ P +
Sbjct: 419 VKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQK 478
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + L L+ S+ L++ L +K++
Sbjct: 479 ITFETLYRGLIQSDMLKTWRRLKKKLE 505
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 197/380 (51%), Gaps = 10/380 (2%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y V+V L + + C+V +M ++G PD+ S ++D +AG+V +A +++ +
Sbjct: 143 TYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLM 202
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN-VMTYNIVISGWSKLGQV 283
G A + ++ LC+ + A M+ + L V TY+ +++G+ +G+V
Sbjct: 203 IARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKV 262
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E V++E+ +PD+++++ IE L GR ++A +VF+TM EKGC PD + Y +
Sbjct: 263 EEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGII 322
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I N+ G + M +PN YT ++ G +KS ++ +ALE+++ +L GI
Sbjct: 323 IDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGI 382
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYK--KARKVGCKLSLTAYKLLLRRLSGFGKCGM- 460
+PST T + + LC A+ + + + RK + S+ Y +++ G GK GM
Sbjct: 383 LPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIH---GLGKVGME 439
Query: 461 --LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
DL EM ++G D Y +I L G++ A+ ++EE L+ G P Y L
Sbjct: 440 ERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTL 499
Query: 519 SNKLLASNKLESAYNLFRKI 538
++L + +++A++L +++
Sbjct: 500 V-QILCRSDVDAAWDLLQEM 518
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 190/399 (47%), Gaps = 12/399 (3%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FF +I PNV+ S+N++++ R F+ + +L +M G+ + T +++ +
Sbjct: 19 FFQSSISEPNVS----SFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSAL 74
Query: 209 IRAGQVYKAIQML-GRLEDFGLKFDA-ESLNVVLWC-----LCQRLHVGAASSLFNSM-K 260
+ KA+ R E+ F+A E+ + V + L + + A + M
Sbjct: 75 CARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVA 134
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
K ++TY +++ G K +V V +E++ +G PD + +S LI+GL +AGR+D+
Sbjct: 135 SKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDE 194
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A ++ D M +G P AY ++++ G E +K + M P +DTY+ +++
Sbjct: 195 ARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVT 254
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
G + KV +A V EEM DR P T + T F+E L S G A +++ + GCK
Sbjct: 255 GYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKP 314
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+ Y +++ G + M ++ + IY ++ G +LE A+ +
Sbjct: 315 DMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELY 374
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ L+ G PS + Y+ + N L K++ A L R+++
Sbjct: 375 QRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQ 413
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ L + + + +Y++I+ LG+ + ++L++M GV PD T +
Sbjct: 404 EALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTS 463
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
++ + AG+V +A+++L + G+ D + ++ LC R V AA L M
Sbjct: 464 LIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILC-RSDVDAAWDLLQEM 518
>gi|224123678|ref|XP_002319139.1| predicted protein [Populus trichocarpa]
gi|222857515|gb|EEE95062.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 198/427 (46%), Gaps = 15/427 (3%)
Query: 109 KLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNV 168
+++ K IE V+ +L L+V+ +V N EA FF WA + P A V+ Y+
Sbjct: 39 RVEMKSKIEQCGIKVSQELVLEVLSRVRN----DWEAAFTFFLWAARQPGYAHSVREYHS 94
Query: 169 IVKALGRRKFFDFMCNVLSDM--AKEGVN-PDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
++ LG+ + FD ++ +M K GV+ +TL I++ + V +AI +
Sbjct: 95 MISILGKMRKFDTAWVLIDEMRGVKTGVSLVTPQTLLIMIRKYCAVHDVGRAINTFYAYK 154
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKL-GQVV 284
F E +L LC+ +V A L K N ++NIV++GW L G
Sbjct: 155 RFKFDMGIEEFQSLLSALCRYKNVQDAEQLMYCNKAVFPLNTKSFNIVLNGWCNLIGSPR 214
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E ERV +E+ G D ++++ ++ +AG + + ++ MK+ G PD YNAVI
Sbjct: 215 ESERVWREMSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYNAVI 274
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+E K M PN+ TY LI L ++RKV +A F++ML R I
Sbjct: 275 HALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCIS 334
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P+ T +FL L + + +K RK+GC+ Y +L+R+ + + + L
Sbjct: 335 PTIRTYHAFLRILRT---GEEVFALLEKMRKMGCQPINDTYIMLIRKFCRWRQLENVFKL 391
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS----RLVYSKLSN 520
W EM E+G D Y +I GL G+L+ A E K P ++ + LSN
Sbjct: 392 WDEMSENGISPDRSSYIVLIHGLFLNGELDAAHKYYTEMKEKQLLPEPKIDEMLQTWLSN 451
Query: 521 KLLASNK 527
K +A +
Sbjct: 452 KQIAEGQ 458
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 106/246 (43%), Gaps = 11/246 (4%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG-----PDTNAYNAVISNYISVG 351
G++ + +I LG+ + D A + D M+ G P T +I Y +V
Sbjct: 84 GYAHSVREYHSMISILGKMRKFDTAWVLIDEMRGVKTGVSLVTPQT--LLIMIRKYCAVH 141
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP-STGTI 410
D + + + + ++ + L+S L + + V DA ++ ++ + P +T +
Sbjct: 142 DVGRAINTFYAYKRFKFDMGIEEFQSLLSALCRYKNVQDAEQLM--YCNKAVFPLNTKSF 199
Query: 411 TSFLEPLCSY-GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
L C+ G P + ++++ K G + + +Y ++ S G +L L+ +M+
Sbjct: 200 NIVLNGWCNLIGSPRESERVWREMSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMK 259
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
+ G D ++Y VI L + A +M+ KG P+ + Y+ L L + K+E
Sbjct: 260 KIGIEPDRKVYNAVIHALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVE 319
Query: 530 SAYNLF 535
A F
Sbjct: 320 EAKGAF 325
>gi|225436259|ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Vitis vinifera]
Length = 566
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 186/400 (46%), Gaps = 7/400 (1%)
Query: 115 VIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALG 174
+++ L + V S ++V +V++R EA FF WA K P A +++Y+ ++ LG
Sbjct: 99 LVKHKLESCGVAASSELVVEVLSRVRNHWEAAFTFFLWAAKQPGYAHSLRAYHSMISILG 158
Query: 175 RRKFFDFMCNVLSDMAKEGVNPDL---ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF 231
+ + FD ++ +M L TLSI++ + V KAI + F
Sbjct: 159 KMRKFDTAWALIDEMRGGRTGTSLVTPHTLSIMIRRYCAVHDVGKAINTFYAHKQFKFGV 218
Query: 232 DAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSK-LGQVVEMERVL 290
E +L LC+ +V A L + F+ ++NI+++GW +G + E ER
Sbjct: 219 GIEEFQNLLSALCRYKNVQDAEQLLFCNRNVFPFDTKSFNIILNGWCNVIGSMREAERFW 278
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
+E+ G D +++S +I + ++ +++F+ MKE PD YNAV+
Sbjct: 279 REMSNRGIQRDVVSYSSIISCYSKVTNLNKVLKLFNQMKEMEIAPDRKVYNAVVHALAKA 338
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
E + K M P+ TY LI L ++RK+ +A EVF+EML RG+ P+ T
Sbjct: 339 SFVKEALNLMKAMEGKGIAPDSVTYNSLIKPLSRARKINEAKEVFDEMLQRGLSPTIRTY 398
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+F L S M+ +K ++ GC Y +L+RR + + + LW EM E
Sbjct: 399 HAFFRILKS---GEEVFMLLEKMKETGCHPDKDTYIMLIRRFCRWRQLDNVFKLWSEMSE 455
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
+G D Y +I GL G+LE A E K F P
Sbjct: 456 NGVGPDRSSYIVLIHGLFLNGKLEEAYKYYIEMKEKQFLP 495
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 177/379 (46%), Gaps = 1/379 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV ++N +V AL ++ F + + K GV P+L T +I + + G + +A+
Sbjct: 291 LCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAV 350
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++LG + GL+ D + N V+ LC++ V A + M G N TYN +I G+
Sbjct: 351 RLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGY 410
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G VV+ R+LK+ V +GF PD T+ L+ G + G D A+ VF KG P
Sbjct: 411 CKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSI 470
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I G ++ M+ C+P++ TY +I+GL K ++DA + +
Sbjct: 471 IVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGD 530
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ +G +P T + ++ C +A+ + + G + Y LL L K
Sbjct: 531 AITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAK 590
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+++++ M E G + Y +I LCN ++ AV ++ E KG P + +
Sbjct: 591 SEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGT 650
Query: 518 LSNKLLASNKLESAYNLFR 536
L L+ AY LFR
Sbjct: 651 LITGFCKVGDLDGAYGLFR 669
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 176/374 (47%), Gaps = 2/374 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ ++ +L D +G PD T +++ F + G +A+ +
Sbjct: 402 TYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDG 461
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
GL+ N ++ LCQ+ + A L N M K ++ TYN++I+G K+G +
Sbjct: 462 LGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCL 521
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ ++ + + +G PD T++ L++G R ++D AIE+ + M +G PD YN +
Sbjct: 522 SDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTL 581
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
++ +E M+ +K M+ C PN+ TY +I L S+KV +A+++ EM +G+
Sbjct: 582 LNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGL 641
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARK-VGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P + + + C G A +++ K + Y +++ S M L
Sbjct: 642 TPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMAL 701
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
L+ EM+++G D Y +I G C G + + E++ KGF PS + ++ N L
Sbjct: 702 RLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCL 761
Query: 523 LASNKLESAYNLFR 536
+K++ A +
Sbjct: 762 CVEHKVQEAVGIIH 775
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 173/382 (45%), Gaps = 1/382 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N V SYN I+ L +F+ V M + V D+ T +I + SF R G+ Y A
Sbjct: 185 NCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAA 244
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISG 276
+++L + G +A + V+ + A LF+ M L +V T+N ++
Sbjct: 245 LRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHA 304
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K G V+E ER+ +++ G P+ TF+ I+GL + G +D A+ + + +G PD
Sbjct: 305 LCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPD 364
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN VI E + M + EPN TY +I G K V DA + +
Sbjct: 365 VVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILK 424
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+ + +G P T S + C G P AM ++K G + S+ Y L++ L G
Sbjct: 425 DAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQG 484
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
L L +EM E G D Y +I GLC +G L +A ++ +++ KG P Y+
Sbjct: 485 LILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYN 544
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
L + KL+SA L ++
Sbjct: 545 TLVDGYCRQLKLDSAIELVNRM 566
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 138/355 (38%), Gaps = 70/355 (19%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI-VMDSFIRAGQVYKAIQMLGR 223
+Y +++ LG F+ M N+LS+M N LE + + M + R G++ +A+ R
Sbjct: 121 TYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQEAVDTFER 180
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQV 283
++ LFN +V +YN +++ + G
Sbjct: 181 MD-----------------------------LFNCDP-----SVYSYNAIMNILVEFGYF 206
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ +V + + D T++ I+ R GR A+ + M GC + AY V
Sbjct: 207 NQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTV 266
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
++ + GD D + + M P++ T+ +L+ L K V ++ +F+++L RG+
Sbjct: 267 VTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGV 326
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T F++ LC G A+ R +GC
Sbjct: 327 CPNLFTFNIFIQGLCKEGSLDRAV------RLLGC------------------------- 355
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+ G D Y VI GLC ++ A + + + GF P+ Y+ +
Sbjct: 356 ----VSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSI 406
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 97/198 (48%), Gaps = 4/198 (2%)
Query: 142 SGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
S E M +F A+ A ++ +YN I+++L K + ++L +M +G+ PD+ +
Sbjct: 591 SEEVMEIF--KAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSF 648
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLE-DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
++ F + G + A + +E + + + N+++ ++L++ A LF+ MK
Sbjct: 649 GTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMK 708
Query: 261 GKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
+ TY ++I G+ K G V + + L E + +GF P TF ++ L ++
Sbjct: 709 KNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQ 768
Query: 320 DAIEVFDTMKEKGCGPDT 337
+A+ + M +K PDT
Sbjct: 769 EAVGIIHLMVQKDIVPDT 786
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 107/248 (43%), Gaps = 15/248 (6%)
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN--------Y 347
+GF T+ +++ LG G+ ++ + M+ +N N ++ Y
Sbjct: 113 QGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMR-------SNLDNTLLEGVYVEAMRFY 165
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
G E + ++ M +NC+P++ +Y +++ L++ A +V+ M D+ +
Sbjct: 166 GRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDV 225
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T T ++ C G P+AA+ + + +GC + AY ++ FG +L+ E
Sbjct: 226 YTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDE 285
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
M E D + ++ LC G + + + ++ L++G CP+ ++ L
Sbjct: 286 MLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGS 345
Query: 528 LESAYNLF 535
L+ A L
Sbjct: 346 LDRAVRLL 353
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 182/391 (46%), Gaps = 1/391 (0%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FF WA + SYN +++ L + D + +DM G P+ T ++ S
Sbjct: 3 FFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSL 62
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNV 267
+A + +A + + G + S ++++ LC+ V A+ L N M G NV
Sbjct: 63 CQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNV 122
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TY ++SG K+G++ E + +V G PD + ++ LI+G + G + +A +F+
Sbjct: 123 VTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEE 182
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M EKGC P YN+++S + G+F +K M C PN+ T+ L+ G K
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A +F EM G P + + + +CS G PH A + ++ + G + +Y +
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNI 302
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L+ S G + L++E+ +SG D Y +I LC G++ A +V ++ + G
Sbjct: 303 LIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG 362
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P V L L +L + LF+ +
Sbjct: 363 SAPDAAVVIPLVIGLCRGERLTESCELFQAM 393
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 155/333 (46%), Gaps = 5/333 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PNV +Y ++ L + ++ S M G PD ++++D F + G +
Sbjct: 119 QPNVV----TYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMG 174
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVI 274
+A ++ + + G + N +L ++ G SLF M + + N+ T+N ++
Sbjct: 175 EAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLL 234
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ K+G +VE R+ E+ + G PD ++++ LI G+ G+ +A + M G G
Sbjct: 235 DGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVG 294
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD +YN +I Y G D +K + + EP+ +Y+ +I L ++ KV A V
Sbjct: 295 PDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVV 354
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F++M+ G P + + LC + +++ K C + Y LL+ +L
Sbjct: 355 FKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCK 414
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+ + +++HE+ E G+ D EI + ++ L
Sbjct: 415 AKRSDDVCEIFHELTERGFSPDVEISKVILETL 447
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 177/375 (47%), Gaps = 1/375 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y ++++L + + F+ +V MA +G +P++ + SI++ R +V +A ++L +
Sbjct: 54 TYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEM 113
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
D G + + + +L LC+ + A LF+ M + + + YN++I G+SK G +
Sbjct: 114 IDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDM 173
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E R+ +E++ +G P T++ L+ G R G +F M +GC P+ +N +
Sbjct: 174 GEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNL 233
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ + +GD E + + M S C P++ +Y LI G+ K +A + EM+ G+
Sbjct: 234 LDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGV 293
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P + ++ G A+ ++ + K G + +Y ++ L GK G
Sbjct: 294 GPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFV 353
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
++ +M +G D + ++ GLC +L + + + ++ P Y+ L KL
Sbjct: 354 VFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLC 413
Query: 524 ASNKLESAYNLFRKI 538
+ + + +F ++
Sbjct: 414 KAKRSDDVCEIFHEL 428
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 128/276 (46%), Gaps = 3/276 (1%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
GEA LF K V +YN ++ R+ F + ++ DM ++G P++ T +
Sbjct: 174 GEAYRLFEEMLEK--GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFN 231
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KG 261
++D F + G + +A ++ + G D S N ++ +C + A L M +
Sbjct: 232 NLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRS 291
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
V ++++YNI+I G+SK G + ++ EI G PD+ ++S +I+ L RAG++ A
Sbjct: 292 GVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAA 351
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
VF M G PD ++ E + ++ M + C P + Y L+
Sbjct: 352 FVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYK 411
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
L K+++ D E+F E+ +RG P LE L
Sbjct: 412 LCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 117/238 (49%)
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+L++++L+E L ++GR D ++ M GC P+T Y ++ + F+E ++
Sbjct: 17 TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
GM++ C PN+ +Y+ LI+GL + +KV +A E+ EM+D G P+ T S L LC G
Sbjct: 77 GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
A+ ++ + GC Y +L+ S G G L+ EM E G Y
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+++G G+ + ++ LR+G P+ ++ L + + A+ LF +++
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMR 254
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 1/165 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
V D+ SYN+++ + D + ++ K G+ PD + S ++D RAG+V A
Sbjct: 292 GVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAA 351
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG 276
+ + G DA + ++ LC+ + + LF +M K + + + YN+++
Sbjct: 352 FVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYK 411
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
K + ++ + E+ GFSPD ++E L R+ D A
Sbjct: 412 LCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDAA 456
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 195/382 (51%), Gaps = 4/382 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D+ SYN+++ L R F +V+ M K G PD+ T+S +++ F + +V+ AI
Sbjct: 100 IGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAI 159
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ ++E+ G + D N ++ C+ V A LF+ M + V + +TYN +++G
Sbjct: 160 DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 219
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
G+ + R+++++V P+ +TF+ +I+ + G+ +A+++++ M + PD
Sbjct: 220 CCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 279
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN++I+ G DE + M + C P++ TY LI+G KS++V + ++F E
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M RG+V T T + ++ G P AA ++ ++ + ++ Y +LL L +
Sbjct: 340 MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS---RMDSRPNIRTYSILLYGLCMNWR 396
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L L+ MQ+S D Y VI G+C IG +E+A + KG P + Y+
Sbjct: 397 VEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTT 456
Query: 518 LSNKLLASNKLESAYNLFRKIK 539
+ + + + + L+RK++
Sbjct: 457 MISGFCRKRQWDKSDLLYRKMQ 478
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 132/286 (46%), Gaps = 1/286 (0%)
Query: 254 SLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
SLF+ M+ + ++ +YNIVI+ + + V V+ +++ G+ PD +T S LI G
Sbjct: 90 SLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGF 149
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
+ R+ DAI++ M+E G PD YN +I +G ++ ++ + M +
Sbjct: 150 CQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADA 209
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
TY L++GL S + +DA + +M+ R IVP+ T T+ ++ G AM +Y++
Sbjct: 210 VTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 269
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+ + Y L+ L G+ + M G D Y +I G C +
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 329
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++ + E ++G + Y+ + + + ++A +F ++
Sbjct: 330 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 139/285 (48%), Gaps = 4/285 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ V D +YN +V L + ++ DM + P++ T + V+D F++ G+
Sbjct: 200 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 259
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
+A+++ + + D + N ++ LC V A + + M K L +V+TYN
Sbjct: 260 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 319
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I+G+ K +V E ++ +E+ G D++T++ +I+G +AGR D A E+F M +
Sbjct: 320 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR- 378
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ Y+ ++ ++ + ++ M E ++ TY +I G+ K V DA
Sbjct: 379 --PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAW 436
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
++F + +G+ P + T+ + C + ++Y+K ++ G
Sbjct: 437 DLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 122/249 (48%), Gaps = 4/249 (1%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
++ +V ++ ++ + F + +M + V+PD+ T + +++ G+V +A
Sbjct: 239 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 298
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISG 276
QML + G D + N ++ C+ V + LF M + L + +TYN +I G
Sbjct: 299 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 358
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ + G+ + + + + P+ T+S L+ GL R++ A+ +F+ M++ D
Sbjct: 359 YFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN VI +G+ ++ ++ +S +P++ +YT +ISG + R+ + ++
Sbjct: 416 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 475
Query: 397 EMLDRGIVP 405
+M + G++P
Sbjct: 476 KMQEDGLLP 484
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 111/274 (40%), Gaps = 35/274 (12%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P + FS ++ + ++ D I +F M+ G G D +YN VI+ F +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
M + EP++ T + LI+G + +V DA+++ +M + G P + ++ C
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL--SGF---------------------- 455
G + A+ ++ + + G + Y L+ L SG
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 456 -----------GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
GK + L+ EM D Y +I GLC G+++ A +++ +
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
KG P + Y+ L N S +++ LFR++
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 180/350 (51%), Gaps = 3/350 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
MA++G PD+ T S ++ + G+V +A++M+ + + G+ D + +++ LC+
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
V A LF+ M + N + YN +I+G K + ++L+E+ ++G+ PD++T++
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK--GMSS 365
++ GL R G++ +A + FD+M +G PD AYN ++ G E +K M+
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
P++ TY LI G + K +A+++F++++ +G +P T T S L L
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A M+KK GC + Y ++L G L+L+ EM E + D + VI
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
LC ++++A V+EE + G P + Y+ L + L +N ++ A+ LF
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELF 350
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 205/435 (47%), Gaps = 14/435 (3%)
Query: 106 FLQKLKGKGVIED-ALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
++++ KGV D A + + VD L GKV L F+ I+ A V
Sbjct: 32 MVEEMTEKGVNPDVATYTIIVD-RLCRAGKVDEADEL--------FHKMIERGCSANTV- 81
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ L + + + +L +MA +G PD T + ++ R G+V +A Q +
Sbjct: 82 AYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSM 141
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK---GKVLFNVMTYNIVISGWSKLG 281
G D + N +L L + V A LF +M KV +++TYN +I G+ ++
Sbjct: 142 PSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVE 201
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ E ++ K+++A+G+ PD++T++ ++ GL R +D+A E+F M + GC P+ Y+
Sbjct: 202 KTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYS 261
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
V+S + VG+ C++ Y+ M+ P++ +I L K++KV DA +V EEM
Sbjct: 262 IVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKI 321
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G VP T L+ LC A ++ GC + +Y ++L L K
Sbjct: 322 GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDA 381
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+ M E D + ++ GLC G+L+ A +++ P + + L +
Sbjct: 382 RVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHG 441
Query: 522 LLASNKLESAYNLFR 536
L + + A LF+
Sbjct: 442 LCRDKRTDEAVRLFQ 456
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 180/400 (45%), Gaps = 3/400 (0%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
EA LF + VA D+ +YN ++ R + D + D+ +G PD T +
Sbjct: 167 AEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYN 226
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK 262
++ R + +A +M ++ D G + + ++VL C+ ++ L+ M K
Sbjct: 227 SILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEK 286
Query: 263 VLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
+V+ N VI K +V + +VL+E+ G PD +T++ L++GL + +D A
Sbjct: 287 RFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKA 346
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
E+F TM + GC PD +Y+ V++ + + M P++ T+ L+ G
Sbjct: 347 HELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDG 406
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L K+ K+ +A ++ + M + ++P T T+ + LC A+ +++ + G
Sbjct: 407 LCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVAD 466
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESG--YPSDGEIYEYVIAGLCNIGQLENAVLV 499
+ + ++L L GK L + M +S + D Y ++ L G+++ AV
Sbjct: 467 VLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDY 526
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ G P + Y+ L N L + A L + +K
Sbjct: 527 FQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMK 566
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 151/320 (47%), Gaps = 38/320 (11%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
+ DV N ++ L + K D VL +M+K G PD+ T +I++D + V KA +
Sbjct: 289 SPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHE 348
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWS 278
+ + D G D S +VVL LC+ V A LF+ M + K++ +V+T+NI++ G
Sbjct: 349 LFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLC 408
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G++ E + +L + PD +T + L+ GL R R D+A+ +F M EKG D
Sbjct: 409 KAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVL 468
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCE--PNMDTYTRLISGLLKSRKVADALEVFE 396
+N V++ G + + ++K M + E P++ TYT L++ L+++ +V A++ F+
Sbjct: 469 PHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQ 528
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+M TG+ GC AY L+ L G
Sbjct: 529 QM--------TGS---------------------------GCAPDYVAYNTLMNGLRKQG 553
Query: 457 KCGMLLDLWHEMQESGYPSD 476
+ L M+E G+ SD
Sbjct: 554 RHIQADRLTQAMKEKGFLSD 573
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 112/245 (45%), Gaps = 2/245 (0%)
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+GF PD +T+S +I GL + G++ +A+E+ + M EKG PD Y ++ G DE
Sbjct: 4 KGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDE 63
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+ + M C N Y LI+GL K + A ++ EEM +G P T + L
Sbjct: 64 ADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILS 123
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH--EMQESGY 473
LC G A + G + AY LL L GK L+ +M +
Sbjct: 124 GLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKV 183
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
D Y +I G C + + + A+ + ++ + KG+ P + Y+ + L + ++ A
Sbjct: 184 APDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEE 243
Query: 534 LFRKI 538
+F+K+
Sbjct: 244 MFKKM 248
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%)
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M+ EP++ TY+ +ISGL K+ KV +ALE+ EEM ++G+ P T T ++ LC G
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A ++ K + GC + AY L+ L L EM GY D Y
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
+++GLC +G++ A + +G+ P + Y+ L + L K+ A+ LF+ + +A
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMA 179
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 204/413 (49%), Gaps = 2/413 (0%)
Query: 115 VIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALG 174
VI+ AL + +S +VV V+ R +G FF W+ K + V++Y++++++
Sbjct: 51 VIDSALDQSGLRVSPEVVEDVLYRFRNAGLLAYRFFQWSEKQRHYEHSVRAYHMMIESTA 110
Query: 175 RRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
+ + + M ++++ M K+ + ++ET IVM + RA +V +AI +E + L +
Sbjct: 111 KIRQYKLMWDLINAMMKKKM-LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLV 169
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
+ N +L LC+ +V A +F +M+ + + TY+I++ GW K + + V +E+V
Sbjct: 170 AFNGLLSALCKSKNVRKAQEIFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMV 229
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
G PD +T+S +++ L +AGR+D+A+ + +M C P T Y+ ++ Y + +
Sbjct: 230 DAGSLPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTETRLE 289
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E + + M + ++ + LI K+ ++ + V +EM +G+ P++ + L
Sbjct: 290 EAVDTFLEMERSGMKADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIIL 349
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
L G A +++K KV C+ Y ++++ + +W M++ G
Sbjct: 350 RHLIDRGEKDEAFDVFRKMIKV-CEPDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVF 408
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
+ +I GLC + A +++EE + G PS + +L LL ++
Sbjct: 409 PSMHTFSVLINGLCEEPNTQKACVLLEEMIEMGIRPSGATFGRLRQLLLKEDR 461
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 182/391 (46%), Gaps = 1/391 (0%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FF WA + SYN +++ L + D + +DM G P+ T ++ S
Sbjct: 3 FFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSL 62
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNV 267
+A + +A + + G + S ++++ LC+ V A+ L N M G NV
Sbjct: 63 CQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNV 122
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TY ++SG K+G++ E + +V G PD + ++ LI+G + G + +A +F+
Sbjct: 123 VTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEE 182
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M EKGC P YN+++S + G+F +K M C PN+ T+ L+ G K
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGD 242
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A +F EM G P + + + +CS G PH A + ++ + G + +Y +
Sbjct: 243 MVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNI 302
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L+ S G + L++E+ +SG D Y +I LC G++ A +V ++ + G
Sbjct: 303 LIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG 362
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P V L L +L + LF+ +
Sbjct: 363 SAPDAAVVIPLVIGLCRGERLTESCELFQAM 393
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 155/333 (46%), Gaps = 5/333 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PNV +Y ++ L + ++ S M G PD ++++D F + G +
Sbjct: 119 QPNVV----TYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMG 174
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVI 274
+A ++ + + G + N +L ++ G SLF M + + N+ T+N ++
Sbjct: 175 EAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLL 234
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ K+G +VE R+ E+ + G PD ++++ L+ G+ G+ +A + M G G
Sbjct: 235 DGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVG 294
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD +YN +I Y G D +K + + EP+ +Y+ +I L ++ KV A V
Sbjct: 295 PDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVV 354
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F++M+ G P + + LC + +++ K C + Y LL+ +L
Sbjct: 355 FKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCK 414
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+ + +++HE+ E G+ D EI + ++ L
Sbjct: 415 AKRSDDVCEIFHELTERGFSPDVEISKVILETL 447
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 177/375 (47%), Gaps = 1/375 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y ++++L + + F+ +V MA +G +P++ + SI++ R +V +A ++L +
Sbjct: 54 TYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEM 113
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
D G + + + +L LC+ + A LF+ M + + + YN++I G+SK G +
Sbjct: 114 IDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDM 173
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E R+ +E++ +G P T++ L+ G R G +F M +GC P+ +N +
Sbjct: 174 GEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNL 233
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ + +GD E + + M S C P++ +Y L+ G+ K +A + EM+ G+
Sbjct: 234 LDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGV 293
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P + ++ G A+ ++ + K G + +Y ++ L GK G
Sbjct: 294 GPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFV 353
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
++ +M +G D + ++ GLC +L + + + ++ P Y+ L KL
Sbjct: 354 VFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLC 413
Query: 524 ASNKLESAYNLFRKI 538
+ + + +F ++
Sbjct: 414 KAKRSDDVCEIFHEL 428
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 128/276 (46%), Gaps = 3/276 (1%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
GEA LF K V +YN ++ R+ F + ++ DM ++G P++ T +
Sbjct: 174 GEAYRLFEEMLEK--GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFN 231
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KG 261
++D F + G + +A ++ + G D S N ++ +C + A L M +
Sbjct: 232 NLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRS 291
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
V ++++YNI+I G+SK G + ++ EI G PD+ ++S +I+ L RAG++ A
Sbjct: 292 GVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAA 351
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
VF M G PD ++ E + ++ M + C P + Y L+
Sbjct: 352 FVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYK 411
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
L K+++ D E+F E+ +RG P LE L
Sbjct: 412 LCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 119/242 (49%)
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
++ +L++++L+E L ++GR D ++ M GC P+T Y ++ + F+E
Sbjct: 13 YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEAR 72
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
++GM++ C PN+ +Y+ LI+GL + +KV +A E+ EM+D G P+ T S L L
Sbjct: 73 SVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGL 132
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
C G A+ ++ + GC Y +L+ S G G L+ EM E G
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
Y +++G G+ + ++ LR+G P+ ++ L + + A+ LF +
Sbjct: 193 FTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE 252
Query: 538 IK 539
++
Sbjct: 253 MR 254
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
V D+ SYN+++ + D + ++ K G+ PD + S ++D RAG+V A
Sbjct: 292 GVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAA 351
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG 276
+ + G DA + ++ LC+ + + LF +M K + + + YN+++
Sbjct: 352 FVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYK 411
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
K + ++ + E+ GFSPD ++E L R+
Sbjct: 412 LCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRS 450
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 194/382 (50%), Gaps = 4/382 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D+ SYN+++ L R F +V+ M K G PD+ T+S +++ F + +V+ AI
Sbjct: 41 IGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAI 100
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ ++E+ G + D N ++ C+ V A LF+ M + V + +TYN +++G
Sbjct: 101 DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 160
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
G+ + R+++++V P+ +TF+ +I+ + G+ +A+++++ M + PD
Sbjct: 161 CCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 220
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN++I+ G DE + M + C P++ TY LI+G KS++V + ++F E
Sbjct: 221 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 280
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M RG+V T T + ++ G P AA ++ + + ++ Y +LL L +
Sbjct: 281 MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWR 337
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L L+ MQ+S D Y VI G+C IG +E+A + KG P + Y+
Sbjct: 338 VEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTT 397
Query: 518 LSNKLLASNKLESAYNLFRKIK 539
+ + + + + L+RK++
Sbjct: 398 MISGFCRKRQWDKSDLLYRKMQ 419
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 132/286 (46%), Gaps = 1/286 (0%)
Query: 254 SLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
SLF+ M+ + ++ +YNIVI+ + + V V+ +++ G+ PD +T S LI G
Sbjct: 31 SLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGF 90
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
+ R+ DAI++ M+E G PD YN +I +G ++ ++ + M +
Sbjct: 91 CQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADA 150
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
TY L++GL S + +DA + +M+ R IVP+ T T+ ++ G AM +Y++
Sbjct: 151 VTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 210
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+ + Y L+ L G+ + M G D Y +I G C +
Sbjct: 211 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 270
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++ + E ++G + Y+ + + + ++A +F ++
Sbjct: 271 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 316
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 139/285 (48%), Gaps = 4/285 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ V D +YN +V L + ++ DM + P++ T + V+D F++ G+
Sbjct: 141 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 200
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
+A+++ + + D + N ++ LC V A + + M K L +V+TYN
Sbjct: 201 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 260
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I+G+ K +V E ++ +E+ G D++T++ +I+G +AGR D A E+F M +
Sbjct: 261 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR- 319
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ Y+ ++ ++ + ++ M E ++ TY +I G+ K V DA
Sbjct: 320 --PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAW 377
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
++F + +G+ P + T+ + C + ++Y+K ++ G
Sbjct: 378 DLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 422
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 122/249 (48%), Gaps = 4/249 (1%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
++ +V ++ ++ + F + +M + V+PD+ T + +++ G+V +A
Sbjct: 180 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 239
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISG 276
QML + G D + N ++ C+ V + LF M + L + +TYN +I G
Sbjct: 240 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 299
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ + G+ + + + + P+ T+S L+ GL R++ A+ +F+ M++ D
Sbjct: 300 YFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 356
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN VI +G+ ++ ++ +S +P++ +YT +ISG + R+ + ++
Sbjct: 357 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 416
Query: 397 EMLDRGIVP 405
+M + G++P
Sbjct: 417 KMQEDGLLP 425
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 111/274 (40%), Gaps = 35/274 (12%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P + FS ++ + ++ D I +F M+ G G D +YN VI+ F +
Sbjct: 8 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
M + EP++ T + LI+G + +V DA+++ +M + G P + ++ C
Sbjct: 68 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL--SGF---------------------- 455
G + A+ ++ + + G + Y L+ L SG
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187
Query: 456 -----------GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
GK + L+ EM D Y +I GLC G+++ A +++ +
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
KG P + Y+ L N S +++ LFR++
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 281
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/467 (25%), Positives = 214/467 (45%), Gaps = 10/467 (2%)
Query: 93 DEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNW 152
DEF E++ + + +E AL V + + +V+NR +G F++W
Sbjct: 60 DEFASDVEKVYRILRKYHSRVPKLELALRESGVVVRPGLTERVLNRCGDAGNLAYRFYSW 119
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL---ETLSIVMDSFI 209
A K D +Y ++K L R + F + ++ +M +E NP L + I+M F
Sbjct: 120 ASKQSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQE--NPHLITPQVFVILMRRFA 177
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMT 269
A V+KA+Q+L + ++G + D +L L + V A+SLF ++ + +V
Sbjct: 178 SARMVHKAVQVLDEMPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEELRYRWKPSVKH 237
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
+ ++ GW K G+++E + VL ++ G PD + ++ L+ G +A ++ DA ++ M+
Sbjct: 238 FTSLLYGWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMR 297
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
KGC P+ +Y +I + +E + + M C+ ++ TY+ LISG K K+
Sbjct: 298 RKGCEPNATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIK 357
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
E+ +EM+ +G P+ + + + +K+GC L+ Y ++
Sbjct: 358 RGYELLDEMIQQGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVI 417
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF- 508
R G+ + LW+EM+ SG + + +I G G L A +E + +G
Sbjct: 418 RLACKLGEVKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQGCLVEACEYFKEMVGRGLF 477
Query: 509 -CPSRLVYSKLSNKLLASNKLE---SAYNLFRKIKIARQNDYARRLW 551
P +L N LL + KLE A+N K + N A +W
Sbjct: 478 AAPQYGTLKELMNSLLRAEKLEMAKDAWNCITASKGCQLNVSAWTIW 524
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 124/294 (42%), Gaps = 5/294 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+ SY V++++L + + + V +M + G DL T S ++ F + G++ + ++L
Sbjct: 304 NATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIKRGYELL 363
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ G + ++ ++ + L N M K ++ YN VI KL
Sbjct: 364 DEMIQQGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKL 423
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG--CGPDTN 338
G+V E R+ E+ + G SP TF +I G G + +A E F M +G P
Sbjct: 424 GEVKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFAAPQYG 483
Query: 339 AYNAVISNYISVGDFDECMKYYKGMS-SYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
++++ + + + ++ S C+ N+ +T I L V +A
Sbjct: 484 TLKELMNSLLRAEKLEMAKDAWNCITASKGCQLNVSAWTIWIHALFSKGHVKEACSFCIA 543
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
M+D+ ++P T + L A + +K RK+ +T +K+ RR
Sbjct: 544 MMDKDLMPQPDTFAKLMRGLKKLYNREFAAEITEKVRKMAADRKIT-FKMYKRR 596
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 176/381 (46%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F WA +SYN +V LG+ K F M ++ +M + LET+S V+
Sbjct: 216 IFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRL 275
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM 268
RAG+ +AI +E +G+ D ++NV++ L + V A ++F +K + FN+
Sbjct: 276 ARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSIPFNLA 335
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
++N++I G+ K ++ E +++ E+ G PD ++++ IE R + +V M
Sbjct: 336 SFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQM 395
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ KGC P+ + ++ +E +K Y+ M C P+ Y+ LI L K+ ++
Sbjct: 396 EHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRL 455
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
D E+ E+M +G+ P T + + C++ A+ + K +V CK L Y L
Sbjct: 456 TDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPL 515
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L+ + +L L M ++ + Y ++ GLC G+L A E L K
Sbjct: 516 LKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEMLSKAM 575
Query: 509 CPSRLVYSKLSNKLLASNKLE 529
P + L +L + LE
Sbjct: 576 VPKDSTFKMLKEELERKSMLE 596
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 111/236 (47%), Gaps = 1/236 (0%)
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T S +I L RAGR +AI F +++ G DT A N ++ + ++ ++ +
Sbjct: 267 TMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFREL 326
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ N+ ++ LI G K++K+ +A ++ E+ G+ P + T+F+E C
Sbjct: 327 KC-SIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDF 385
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
+ + GCK ++ + +++ L + L ++ +M++ G D Y +
Sbjct: 386 RNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSL 445
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I L G+L + ++E+ ++G P L Y+ L + A ++ E+A L K++
Sbjct: 446 IFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKME 501
>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
gi|238014984|gb|ACR38527.1| unknown [Zea mays]
gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 186/425 (43%), Gaps = 4/425 (0%)
Query: 125 VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCN 184
V +S +V KV++R + A FF WA SY+++V LG+ K FD MC
Sbjct: 159 VRVSARLVSKVLSRFSNDWVAAFGFFMWAGTQEGYCHCADSYDMMVDILGKFKQFDLMCG 218
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
++ M + G L T++ VM A + AI +++ FG+ D +++NV+L LC
Sbjct: 219 LIGQMHEIGGLVSLATMTKVMRRLCGANRWSDAIDAFHKMDRFGVAKDTKAMNVLLDTLC 278
Query: 245 QRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
+ V A F ++KG + + ++N ++ GW K + E +KE+ GFSP T
Sbjct: 279 KERSVKRARGAFQALKGTIPPDESSFNTLVHGWCKARMLKEARETMKEMERHGFSPSVTT 338
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
++ LIE + D M KGC P+ Y V+ G E + + +
Sbjct: 339 YTCLIEAYCMEKDFQTVDGILDEMHTKGCTPNIITYTIVMHALGKAGRTQEALDTFDKVK 398
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
C + Y LI L ++ ++ DA V EEM GI P+ T + + C +
Sbjct: 399 QDGCALDASFYNCLIYILCRAGRLQDANFVVEEMHRTGISPNLTTFNTLISAACDHSLAE 458
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A+ + + + C + Y LL+ LL L M D Y ++
Sbjct: 459 NALKLLVQMEEQSCNPDIKTYTPLLKLCCRRKWVKTLLFLICHMFRKDITPDFSTYTLLV 518
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
LC G+L + L +EE + KGF P + + + KL + L + RKI++ R +
Sbjct: 519 CWLCRNGRLTQSCLFLEEMVLKGFTPQQATFDLVLEKLKNMHMLSAV----RKIQLLRMH 574
Query: 545 DYARR 549
R
Sbjct: 575 TEGTR 579
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 185/352 (52%), Gaps = 1/352 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + G P+L T +V++ + G A+ +L ++E ++ D N ++ LC+ H
Sbjct: 178 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 237
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
V A +LF M+ K + NV+TY+ +IS G+ + ++L +++ + +P+ +TF+
Sbjct: 238 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 297
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI+ + G+ +A +++D M ++ PD YN++++ + D+ + ++ M S +
Sbjct: 298 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 357
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
C P++ TY LI G KS++V D E+F EM RG+V T T T+ ++ L G A
Sbjct: 358 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 417
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++K+ G + Y +LL L GK L+++ MQ+S D IY +I G+
Sbjct: 418 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 477
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
C G++++ + KG P+ + Y+ + + L + L+ AY L +K+K
Sbjct: 478 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 529
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 183/388 (47%), Gaps = 5/388 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PN+ +Y V+V L +R D N+L+ M + D+ + ++DS + V
Sbjct: 184 QPNLV----TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 239
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVI 274
A+ + +E G++ + + + ++ CLC AS L + M + K+ N++T+N +I
Sbjct: 240 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 299
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+ K G+ VE E++ +++ PD T++ L+ G R+D A ++F+ M K C
Sbjct: 300 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 359
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN +I + ++ + ++ MS + TYT LI GL +A +V
Sbjct: 360 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 419
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F++M+ G+ P T + L+ LC+ G A+ ++ +K KL + Y ++ +
Sbjct: 420 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 479
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK DL+ + G + Y +I+GLC+ L+ A ++++ G P+
Sbjct: 480 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 539
Query: 515 YSKLSNKLLASNKLESAYNLFRKIKIAR 542
Y+ L L ++ L R+++ R
Sbjct: 540 YNTLIRAHLRDGDKAASAELIREMRSCR 567
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 172/360 (47%), Gaps = 8/360 (2%)
Query: 144 EAMVLFFNWAIK--HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
+A+ LF K PNV +Y+ ++ L + +LSDM ++ +NP+L T
Sbjct: 240 DALNLFKEMETKGIRPNVV----TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 295
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+ ++D+F++ G+ +A ++ + + D + N ++ C + A +F M
Sbjct: 296 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 355
Query: 262 KVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
K F +V+TYN +I G+ K +V + + +E+ G D++T++ LI+GL G D+
Sbjct: 356 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 415
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A +VF M G PD Y+ ++ + G ++ ++ + M + ++ YT +I
Sbjct: 416 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 475
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
G+ K+ KV D ++F + +G+ P+ T + + LCS A + KK ++ G
Sbjct: 476 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 535
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+ Y L+R G +L EM+ + D ++A + + G+L+ + L M
Sbjct: 536 NSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKSFLDM 594
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 128/312 (41%), Gaps = 35/312 (11%)
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
+++ + TYNI+I+ + + Q+ +L +++ G+ P +T S L+ G RI DA
Sbjct: 77 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 136
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+ + D M E G PDT + +I E + M C+PN+ TY +++G
Sbjct: 137 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 196
Query: 382 LLKS-----------------------------------RKVADALEVFEEMLDRGIVPS 406
L K R V DAL +F+EM +GI P+
Sbjct: 197 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 256
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
T +S + LCSYG A + + +L + L+ GK L+
Sbjct: 257 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 316
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
+M + D Y ++ G C +L+ A + E + K P + Y+ L S
Sbjct: 317 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 376
Query: 527 KLESAYNLFRKI 538
++E LFR++
Sbjct: 377 RVEDGTELFREM 388
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 110/236 (46%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P + F+ L+ + + + D I + + M+ YN +I+ + +
Sbjct: 45 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 104
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
M EP++ T + L++G ++++DA+ + ++M++ G P T T T+ + L
Sbjct: 105 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 164
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
+ A+ + + + GC+ +L Y +++ L G + L+L ++M+ + +D I
Sbjct: 165 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 224
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ +I LC +++A+ + +E KG P+ + YS L + L + + A L
Sbjct: 225 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 280
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 85/203 (41%)
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y ++ N + D+ + + GM P++ + +L+S + K +K + + E+M
Sbjct: 15 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 74
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
IV T + C A+ + K K+G + S+ LL +
Sbjct: 75 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 134
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ L +M E GY D + +I GL + AV +++ +++G P+ + Y +
Sbjct: 135 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 194
Query: 520 NKLLASNKLESAYNLFRKIKIAR 542
N L + A NL K++ A+
Sbjct: 195 NGLCKRGDTDLALNLLNKMEAAK 217
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 176/381 (46%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F WA +SYN +V LG+ K F M ++ +M + LET+S V+
Sbjct: 193 IFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRL 252
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM 268
RAG+ +AI +E +G+ D ++NV++ L + V A ++F +K + FN+
Sbjct: 253 ARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSIPFNLA 312
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
++N++I G+ K ++ E +++ E+ G PD ++++ IE R + +V M
Sbjct: 313 SFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQM 372
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ KGC P+ + ++ +E +K Y+ M C P+ Y+ LI L K+ ++
Sbjct: 373 EHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRL 432
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
D E+ E+M +G+ P T + + C++ A+ + K +V CK L Y L
Sbjct: 433 TDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPL 492
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L+ + +L L M ++ + Y ++ GLC G+L A E L K
Sbjct: 493 LKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEMLSKAM 552
Query: 509 CPSRLVYSKLSNKLLASNKLE 529
P + L +L + LE
Sbjct: 553 VPKDSTFKMLKEELERKSMLE 573
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 111/236 (47%), Gaps = 1/236 (0%)
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T S +I L RAGR +AI F +++ G DT A N ++ + ++ ++ +
Sbjct: 244 TMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFREL 303
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ N+ ++ LI G K++K+ +A ++ E+ G+ P + T+F+E C
Sbjct: 304 KC-SIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDF 362
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
+ + GCK ++ + +++ L + L ++ +M++ G D Y +
Sbjct: 363 RNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSL 422
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I L G+L + ++E+ ++G P L Y+ L + A ++ E+A L K++
Sbjct: 423 IFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKME 478
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 185/352 (52%), Gaps = 1/352 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + G P+L T +V++ + G A+ +L ++E ++ D N ++ LC+ H
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
V A +LF M+ K + NV+TY+ +IS G+ + ++L +++ + +P+ +TF+
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI+ + G+ +A +++D M ++ PD YN++++ + D+ + ++ M S +
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
C P++ TY LI G KS++V D E+F EM RG+V T T T+ ++ L G A
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++K+ G + Y +LL L GK L+++ MQ+S D IY +I G+
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
C G++++ + KG P+ + Y+ + + L + L+ AY L +K+K
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 183/388 (47%), Gaps = 5/388 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PN+ +Y V+V L +R D N+L+ M + D+ + ++DS + V
Sbjct: 222 QPNLV----TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVI 274
A+ + +E G++ + + + ++ CLC AS L + M + K+ N++T+N +I
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+ K G+ VE E++ +++ PD T++ L+ G R+D A ++F+ M K C
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN +I + ++ + ++ MS + TYT LI GL +A +V
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F++M+ G+ P T + L+ LC+ G A+ ++ +K KL + Y ++ +
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK DL+ + G + Y +I+GLC+ L+ A ++++ G P+
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 515 YSKLSNKLLASNKLESAYNLFRKIKIAR 542
Y+ L L ++ L R+++ R
Sbjct: 578 YNTLIRAHLRDGDKAASAELIREMRSCR 605
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 172/360 (47%), Gaps = 8/360 (2%)
Query: 144 EAMVLFFNWAIK--HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
+A+ LF K PNV +Y+ ++ L + +LSDM ++ +NP+L T
Sbjct: 278 DALNLFKEMETKGIRPNVV----TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 333
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+ ++D+F++ G+ +A ++ + + D + N ++ C + A +F M
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
Query: 262 KVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
K F +V+TYN +I G+ K +V + + +E+ G D++T++ LI+GL G D+
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 453
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A +VF M G PD Y+ ++ + G ++ ++ + M + ++ YT +I
Sbjct: 454 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
G+ K+ KV D ++F + +G+ P+ T + + LCS A + KK ++ G
Sbjct: 514 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 573
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+ Y L+R G +L EM+ + D ++A + + G+L+ + L M
Sbjct: 574 NSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKSFLDM 632
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 128/312 (41%), Gaps = 35/312 (11%)
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
+++ + TYNI+I+ + + Q+ +L +++ G+ P +T S L+ G RI DA
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+ + D M E G PDT + +I E + M C+PN+ TY +++G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 382 LLKS-----------------------------------RKVADALEVFEEMLDRGIVPS 406
L K R V DAL +F+EM +GI P+
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
T +S + LCSYG A + + +L + L+ GK L+
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
+M + D Y ++ G C +L+ A + E + K P + Y+ L S
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 527 KLESAYNLFRKI 538
++E LFR++
Sbjct: 415 RVEDGTELFREM 426
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 110/236 (46%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P + F+ L+ + + + D I + + M+ YN +I+ + +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
M EP++ T + L++G ++++DA+ + ++M++ G P T T T+ + L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
+ A+ + + + GC+ +L Y +++ L G + L+L ++M+ + +D I
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ +I LC +++A+ + +E KG P+ + YS L + L + + A L
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 85/203 (41%)
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y ++ N + D+ + + GM P++ + +L+S + K +K + + E+M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
IV T + C A+ + K K+G + S+ LL +
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ L +M E GY D + +I GL + AV +++ +++G P+ + Y +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 520 NKLLASNKLESAYNLFRKIKIAR 542
N L + A NL K++ A+
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAK 255
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 186/355 (52%), Gaps = 5/355 (1%)
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
P + T +I++D F +A Q+ +A+ ++ +F + + + NVV+ LC+ A
Sbjct: 4 QPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYE 62
Query: 255 LFNSMK-GK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA-EGFSPDSLTFSFLIEG 311
+ M+ GK V +++TY+ VI+G+ K G++ +L+E+V +G +PD +T++ +++G
Sbjct: 63 VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG-MSSYNCEP 370
L R G++D A E+ MK KG PD ++A+I+ + + DE +K YK ++S + +P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
++ TYT LI G KS + A+++ M R VP+ T +S L LC G A+ ++
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
++ GC ++ Y L+ L K L EM + P D Y ++ G C +
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQND 545
G++E A + +E K P R+ Y+ L +++LE A L +K A D
Sbjct: 303 GRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGID 357
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 189/388 (48%), Gaps = 11/388 (2%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAK-EGVNPDLETLSIVMDSFIRAGQVYKA 217
VA + ++YNV+V L + + VL +M + V PDL T S V++ F + G++ +A
Sbjct: 37 VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 96
Query: 218 IQMLGRL-EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVIS 275
++L + G+ D + V+ LC+ + A + MK K V + T++ +I+
Sbjct: 97 CEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 156
Query: 276 GWSKLGQVVEMERVLKEIV-AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
GW +V E ++ KEI+ + + PD +T++ LI+G ++G ++ A+++ M+ + C
Sbjct: 157 GWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCV 216
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ Y++++ GD D+ + ++ M+S C PN+ TYT LI GL + KV A +
Sbjct: 217 PNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLL 276
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+EM P T + + L+ C G A ++K+ C Y L+R G
Sbjct: 277 MDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVR---G 333
Query: 455 FGKCGMLLD---LWHEMQE-SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
F L + L M+ +G D Y V+AG + A ++E + + P
Sbjct: 334 FCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAP 393
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ + YS L + L + +++ A + + +
Sbjct: 394 NAVTYSSLIDGLCKAGRVDHAMEVLKNM 421
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 181/387 (46%), Gaps = 11/387 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y ++ + + +L M P++ T S ++ +AG + +A+ +
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
R+ G + + ++ LC V AA L + M + ++YN ++ G+ +L
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK-GCGPDTNA 339
G++ E +++ KE+ + PD +T++ L+ G A R+++A + + MK G PD
Sbjct: 303 GRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVT 362
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y+ V++ Y F E ++ + M + N PN TY+ LI GL K+ +V A+EV + M+
Sbjct: 363 YSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMV 422
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
++ + PS GT S + LC G A + G + + Y LL S G+
Sbjct: 423 NKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRME 482
Query: 460 MLLDLWHEMQESGYPSDG-------EIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PS 511
+ +L+ M++ S + + +I GLC +++ A+ V+EE LR C P+
Sbjct: 483 IAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEE-LRSRECEPA 541
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
+ + LL + + E A L I
Sbjct: 542 EEDCLAIVDGLLRAGRTEEAGKLINSI 568
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 163/348 (46%), Gaps = 18/348 (5%)
Query: 104 GVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKH--PNVAK 161
G + +K GV+E NV ++ + G+L +A+ LF K PNV
Sbjct: 198 GNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLD-QALDLFRRMTSKGCVPNVV- 255
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+Y ++ L D ++ +M PD + + ++D + R G++ +A Q+
Sbjct: 256 ---TYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLF 312
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSK 279
+ D + ++ C + A L +MK + +V+TY+IV++G+S+
Sbjct: 313 KEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSR 372
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
+ VE ++E++A +P+++T+S LI+GL +AGR+D A+EV M K P
Sbjct: 373 AKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGT 432
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM- 398
+N+VI +GD DE K M+++ EP M TYT L+ G ++ ++ A E+FE M
Sbjct: 433 FNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMR 492
Query: 399 -------LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
+VP ++ + LC AM + ++ R C+
Sbjct: 493 KKAKKSSSAANLVPEQA-FSALIRGLCKAREIDKAMAVVEELRSRECE 539
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 125/258 (48%), Gaps = 13/258 (5%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDM-AKEGVNPDLETLS 202
EA LF A K + D +Y +V+ + +L +M G++PD+ T S
Sbjct: 307 EAKQLFKEMATK--SCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 364
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK 262
IV+ + RA + +A + + + + +A + + ++ LC+ V A + +M K
Sbjct: 365 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNK 424
Query: 263 -VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
V +V T+N VI +LG + E ++L + A G P +T++ L+EG R GR++ A
Sbjct: 425 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIA 484
Query: 322 IEVFDTMKEKGCG--------PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
E+F+ M++K P+ A++A+I + D+ M + + S CEP +
Sbjct: 485 YELFEVMRKKAKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEE 543
Query: 374 TYTRLISGLLKSRKVADA 391
++ GLL++ + +A
Sbjct: 544 DCLAIVDGLLRAGRTEEA 561
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 3/173 (1%)
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
C+P + T+T +I G K+ ++ AL FE+M + + P+ T + LC A
Sbjct: 3 CQPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAY 61
Query: 428 MMYKKARK-VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM-QESGYPSDGEIYEYVIA 485
+ K+ R L Y ++ G+ ++ EM G D Y V+
Sbjct: 62 EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GLC G+++ A ++ E KG P + +S L + K++ A L+++I
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEI 174
>gi|297834384|ref|XP_002885074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330914|gb|EFH61333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/476 (25%), Positives = 218/476 (45%), Gaps = 26/476 (5%)
Query: 40 LSNQKKNMSSLDEHHVL---KELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVDEFL 96
+ N K N++ L H+L + L +++ + FPN + +S + I R
Sbjct: 31 VPNHKNNIT-LSRFHLLGINQATHFLHSLAAPDKFPNGFNQSAVDVHNIIKHHRGSS--- 86
Query: 97 LPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKH 156
PEE IE L + L+ ++V +VVNR + + +KH
Sbjct: 87 -PEE---------------IERILDKCGIQLTEELVFEVVNRNRSDWKPAYILSRLIVKH 130
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
YN I+ LG+ + F+ V+ +M+K D +T ++++ + A +V +
Sbjct: 131 SVYISSSLVYNEILDVLGKMRRFEEFHQVVDEMSKRDGFVDEKTYEVLLNRYAAAHKVDE 190
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISG 276
A+ + R +FG++ D + + +L LC+ HV A +LF S + + ++ T NI+++G
Sbjct: 191 AVGVFERRREFGIEDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIRTMNIILNG 250
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
W LG V E +R+ K+I+A PD +++ +I L + G++ A+E++ + E G PD
Sbjct: 251 WCVLGNVHEAKRIWKDIIASKCKPDVVSYGTMINALTKKGKLGKAMELYRALWETGRNPD 310
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
N VI E ++ +K MS PN+ TY L+ L K R+ E+ E
Sbjct: 311 VKICNNVIDALCFKKRIPEALEVFKEMSEKGPSPNVVTYNSLLKHLCKIRRTEKVWELVE 370
Query: 397 EMLDRGIVPSTGTIT-SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
EM +G S +T +L A++ ++ K C+++ Y L+ R +
Sbjct: 371 EMEHKGGSCSPNDVTFGYLLKYSQRSKDVDAVL--ERMAKNKCEMTSDLYNLMFRLYVQW 428
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
+ ++W EM+ SG D Y I GL G++ A+ +E + KG P
Sbjct: 429 DNEEKVREIWGEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPE 484
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 121/251 (48%), Gaps = 6/251 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+++ N+I+ + D+ PD+ + ++++ + G++ KA+++
Sbjct: 240 DIRTMNIILNGWCVLGNVHEAKRIWKDIIASKCKPDVVSYGTMINALTKKGKLGKAMELY 299
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
L + G D + N V+ LC + + A +F M K NV+TYN ++ K+
Sbjct: 300 RALWETGRNPDVKICNNVIDALCFKKRIPEALEVFKEMSEKGPSPNVVTYNSLLKHLCKI 359
Query: 281 GQVVEMERVLKEIVAEG--FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
+ ++ +++E+ +G SP+ +TF +L++ R+ +D V + M + C ++
Sbjct: 360 RRTEKVWELVEEMEHKGGSCSPNDVTFGYLLKYSQRSKDVD---AVLERMAKNKCEMTSD 416
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
YN + Y+ + ++ + + M P+ TYT I GL K+ +AL F+EM
Sbjct: 417 LYNLMFRLYVQWDNEEKVREIWGEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEM 476
Query: 399 LDRGIVPSTGT 409
+ +G+VP T
Sbjct: 477 MSKGMVPEPRT 487
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 106/238 (44%), Gaps = 1/238 (0%)
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
SL ++ +++ LG+ R ++ +V D M ++ D Y +++ Y + DE + ++
Sbjct: 137 SLVYNEILDVLGKMRRFEEFHQVVDEMSKRDGFVDEKTYEVLLNRYAAAHKVDEAVGVFE 196
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
+ E ++ + L+ L + + V A +F R T+ L C G
Sbjct: 197 RRREFGIEDDLVAFHGLLMWLCRYKHVEFAETLFCSR-RREFGCDIRTMNIILNGWCVLG 255
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
H A ++K CK + +Y ++ L+ GK G ++L+ + E+G D +I
Sbjct: 256 NVHEAKRIWKDIIASKCKPDVVSYGTMINALTKKGKLGKAMELYRALWETGRNPDVKICN 315
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
VI LC ++ A+ V +E KG P+ + Y+ L L + E + L +++
Sbjct: 316 NVIDALCFKKRIPEALEVFKEMSEKGPSPNVVTYNSLLKHLCKIRRTEKVWELVEEME 373
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 169/352 (48%), Gaps = 6/352 (1%)
Query: 177 KFFDFMCNVLSDMAKE---GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA 233
K F + + LSDM + + P E ++ ++ RA AI+ ++ DFG+K
Sbjct: 101 KQFPLIWDFLSDMRETRCCEICP--EIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGV 158
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
++ +L+ LC+R HV A F+ + +V+ N TY+I++ GW +G E ++ +E+
Sbjct: 159 GDVDQLLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEM 218
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
G + D + ++ L+E L + G +D+A ++F M G PD +Y+ I Y V D
Sbjct: 219 RERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDI 278
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
+ M YN PN+ TY ++ L KS KV +A ++ +EM++RG+ P + +
Sbjct: 279 HSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAI 338
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
C + + A+ + + K C Y ++L+ L G+ + D+W M+E G+
Sbjct: 339 QAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGF 398
Query: 474 PSDGEIYEYVIAGLC-NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
Y ++ G C G+LE A E + G P L N+++
Sbjct: 399 YPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIG 450
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 112/234 (47%), Gaps = 9/234 (3%)
Query: 142 SGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
S EA LF ++ A DV +YN +++AL + D + +M G+ PD +
Sbjct: 208 SSEARKLFEE--MRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSY 265
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
SI + ++ ++ A Q+L R+ + L + + N ++ LC+ V A L + M
Sbjct: 266 SIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIE 325
Query: 262 K-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
+ V ++ +YN + + +V + R++ + E PD T++ +++ L R GR D
Sbjct: 326 RGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDR 385
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYI-SVGDFDECMKYYK-----GMSSYNC 368
+V+ M+E+G P + Y ++ + G +E KY++ G+ Y+C
Sbjct: 386 VTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSC 439
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 97/228 (42%), Gaps = 1/228 (0%)
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
L+ L + + A E FD + + P+ Y+ ++ + VGD E K ++ M
Sbjct: 164 LLYVLCKRKHVKQAQEFFDKVNVE-VMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERG 222
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
C ++ Y L+ L K V +A ++F EM G+ P + + F+ C H+A
Sbjct: 223 CAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAF 282
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+ + R+ ++ Y ++++L K L EM E G D Y + A
Sbjct: 283 QVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFH 342
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
C+ ++ A+ ++ ++ P R Y+ + LL + + +++
Sbjct: 343 CDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVW 390
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 81/184 (44%), Gaps = 1/184 (0%)
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ ++ + M + + + +L+ L K + V A E F++ ++ ++P+ T + +
Sbjct: 141 DAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDK-VNVEVMPNAKTYSILM 199
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
G A ++++ R+ GC + + AY LL L G L+ EM +G
Sbjct: 200 RGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLA 259
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
D Y I C + + +A V++ R P+ Y+ + KL S K++ AY L
Sbjct: 260 PDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQL 319
Query: 535 FRKI 538
++
Sbjct: 320 LDEM 323
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 64/172 (37%), Gaps = 1/172 (0%)
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
CE + + + ++ DA+ F +M D G+ G + L LC A
Sbjct: 119 CEICPEIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQ 178
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+ K V + Y +L+R G L+ EM+E G D Y ++ L
Sbjct: 179 EFFDKV-NVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEAL 237
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
C G ++ A + E G P YS N + SA+ + +++
Sbjct: 238 CKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMR 289
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 133/449 (29%), Positives = 214/449 (47%), Gaps = 16/449 (3%)
Query: 97 LPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKH 156
L E LR V K G+G IE +L L D+VGKV++R A +F WA K
Sbjct: 38 LAEIILRQVVDSKRAGEG-IEKSLGLYGDILVPDLVGKVIHRIPDPNTAWEVF-QWAGKQ 95
Query: 157 PNVAKDVKSYN----VIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+ + N V VKA R+ D S M K PD + + +M+ F +AG
Sbjct: 96 SKFTHNRFTCNNLLSVYVKA---RRVEDAHLFFQSHM-KNVFEPDEVSYNTLMNGFFKAG 151
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNI 272
V KA+ + G ++D G+ S N+VL LC + A +F M G N+++Y I
Sbjct: 152 DVKKALALFGEMKDSGIAV-LRSHNIVLRGLCSGGKISMAWEVFKDMSGIFSPNLISYTI 210
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G K +V + + K++V + PD +T+ LI+GLG+ R+ +A ++F+ + KG
Sbjct: 211 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 270
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGM-SSYNCEPNMDTYTRLISGLLKSRKVADA 391
C P YN +I G + + Y M + +P+M TY+ LI+GL S + A
Sbjct: 271 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKA 330
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG--CKLSLTAYKLLL 449
E++EEMLD G P T + L+ LC G AM +++K VG C ++ Y +L+
Sbjct: 331 YELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKM-GVGNVCDPNVITYTVLI 389
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
R + G + L EM+ D + VI LC +++ A + ES+ K
Sbjct: 390 DRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELF-ESIGKTCK 448
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P ++++ + +++ A L ++
Sbjct: 449 PDSVLFNTMLAGYCKITRIDDAKKLHDRM 477
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 175/357 (49%), Gaps = 13/357 (3%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV-NPDLETLSIVMDSFIRAGQVYKAIQML 221
++S+N++++ L V DM+ G+ +P+L + +I++D ++ +V KAI +
Sbjct: 171 LRSHNIVLRGLCSGGKISMAWEVFKDMS--GIFSPNLISYTIMIDGLCKSRKVDKAITLF 228
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
++ D + D + ++ L ++ V A LF + K V+TYN +I G K
Sbjct: 229 KQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKC 288
Query: 281 GQVVEMERVLKEIVAEG-FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G++ + ++V E PD T+S LI GL + R + A E+++ M + GC PD
Sbjct: 289 GRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVT 348
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYN-CEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
YN ++ G D+ M+ ++ M N C+PN+ TYT LI K ++ DA+++ +EM
Sbjct: 349 YNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEM 408
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
R ++P T T+ ++ LC A +++ K CK + +L +G+ K
Sbjct: 409 EGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKT-CKPDSVLFNTML---AGYCKI 464
Query: 459 GMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
+ D L M +SG Y ++ G C G+ +A+++ E + GF P R
Sbjct: 465 TRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPER 521
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 132/253 (52%), Gaps = 8/253 (3%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG-VNPDLETLSIVMDSFIRAGQV 214
HP V +YN ++ L + + + DM +E + PD+ T S +++ + +
Sbjct: 272 HPTVV----TYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRG 327
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVL-FNVMTYNI 272
KA ++ + D G D + N +L LC+ A +F M G V NV+TY +
Sbjct: 328 EKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTV 387
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I + K+ ++ + ++ KE+ PD++TF+ +I+ L + RID+A E+F+++ K
Sbjct: 388 LIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIG-KT 446
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
C PD+ +N +++ Y + D+ K + M C P + TYT L++G ++ + +DAL
Sbjct: 447 CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDAL 506
Query: 393 EVFEEMLDRGIVP 405
++ EM++ G P
Sbjct: 507 IMYHEMIEMGFPP 519
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 90/178 (50%), Gaps = 1/178 (0%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV-NPDLETLSIVMDSFIRAGQVYKAI 218
+ DV +YN ++ L + D + M V +P++ T ++++D F + ++ A+
Sbjct: 343 SPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAV 402
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
++ +E L DA + V+ LC+ + A LF S+ + + +N +++G+
Sbjct: 403 KLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKTCKPDSVLFNTMLAGYC 462
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K+ ++ + +++ ++ G +P T++ L+ G R GR DA+ ++ M E G P+
Sbjct: 463 KITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPE 520
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
T L+S +K+R+V DA F+ + P + + + G A+ ++ +
Sbjct: 104 TCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEM 163
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI-YEYVIAGLCNIGQ 492
+ G + L ++ ++LR L GK M +++ +M SG S I Y +I GLC +
Sbjct: 164 KDSGIAV-LRSHNIVLRGLCSGGKISMAWEVFKDM--SGIFSPNLISYTIMIDGLCKSRK 220
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ A+ + ++ + K P + Y L + L +++ AY+LF + +
Sbjct: 221 VDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEAR 267
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 175/355 (49%), Gaps = 1/355 (0%)
Query: 186 LSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
L M K G PDL T + ++ F ++ A+ + ++ G + + + ++ CLC+
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK 199
Query: 246 RLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
H+ A +FN M + NV+TYN ++SG ++G+ + +L++++ G P+ +T
Sbjct: 200 NRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVIT 259
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
F+ LI+ + G+I +A E++ M + PD Y A+I+ + G DE + + M
Sbjct: 260 FTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLME 319
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
S PN TYT LI G KS++V D ++F EM +G+V +T T T ++ C G P
Sbjct: 320 SNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPD 379
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A ++ + + Y +LL L G L ++ M++ + Y +I
Sbjct: 380 VAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIII 439
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G+C +G++E+A + KG P+ + Y+ + + + A LF+K+K
Sbjct: 440 QGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMK 494
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 131/286 (45%), Gaps = 1/286 (0%)
Query: 254 SLFNSMKGKVLFNVM-TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
SLF M+ + V+ T NIV++ + Q L +++ GF PD +TF+ L+ G
Sbjct: 103 SLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGF 162
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
RI+DA+ +FD + G P+ Y +I + ++ + M PN+
Sbjct: 163 CHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNV 222
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
TY L+SGL + + +DA + +M+ RGI P+ T T+ ++ G A +YK
Sbjct: 223 VTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKV 282
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
++ + Y L+ L +G+ +++ M+ +GY + Y +I G C +
Sbjct: 283 MIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKR 342
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+E+ + E +KG + + Y+ L + + A +F ++
Sbjct: 343 VEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQM 388
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 101/237 (42%), Gaps = 35/237 (14%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P + F+ L+ + + R D I +F+ M+ G P N V++ +
Sbjct: 80 PSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCF 139
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
M EP++ T+T L+ G ++ DAL +F++++ G P+ T T+ + LC
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLC- 198
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
K R + ++++++M ++G +
Sbjct: 199 ------------KNRHLN----------------------HAVEIFNQMGDNGIRPNVVT 224
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
Y +++GLC IG+ +A ++ + +++G P+ + ++ L + + K+ A L++
Sbjct: 225 YNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYK 281
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
+ + + + +Y V+++ D V + M PD+ T ++++D
Sbjct: 351 YEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYN 410
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTY 270
G V KA+ +F M+ + + N++TY
Sbjct: 411 GYVEKALM-----------------------------------IFKYMRKREMDINIVTY 435
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
I+I G K+G+V + + + ++G P+ +T++ +I G R G I +A +F MKE
Sbjct: 436 TIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKE 495
Query: 331 KGCGPD 336
G P+
Sbjct: 496 DGFLPN 501
>gi|224117122|ref|XP_002317482.1| predicted protein [Populus trichocarpa]
gi|222860547|gb|EEE98094.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 185/387 (47%), Gaps = 5/387 (1%)
Query: 127 LSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVL 186
++ D+V KV+ R + +FFNW K ++ YN I+ LGR + F+ + VL
Sbjct: 1 MTQDLVLKVLKRHRSDWKPAYIFFNWVSKEGTISLSSCVYNEILDILGRMRRFEELTLVL 60
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
+M+K D +T ++++ + A V +AI + + GL+ D S +L LC+
Sbjct: 61 DEMSKREGFVDEDTYRVLVNRYAGAHMVEEAIGAFNKRRELGLELDLVSFQKLLMYLCRY 120
Query: 247 LHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
HV A +L +S + ++ T NIV++GW LG V E +R K+I+A PD T+
Sbjct: 121 KHVDVAETLLHSKGHEFGVDIKTMNIVLNGWCVLGNVREAKRFWKDIIASKCKPDVFTYG 180
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
I+ L G++ A+++++ M + C PD N VI E + ++GM
Sbjct: 181 TFIKALTNKGKLGTAMKLYEAMWKMQCKPDVVICNCVIDALCFKKRVPEALAVFEGMKER 240
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR--GIVPSTGTITSFLEPLCSYGPPH 424
C PN+ TY LI + K ++ E+ +EM ++ +P T L+ L P
Sbjct: 241 GCIPNVATYNSLIKHMCKIGRMEKVYELLDEMQEKKGSCMPDEITFNYLLKSL---KKPE 297
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
+ ++ + GCK++ LLL+ + + + W EM+++G D Y +I
Sbjct: 298 EVAGVLERMKINGCKMNNDTCNLLLKLHADWDSEEKVRYTWEEMEKNGLGLDRRSYTIMI 357
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPS 511
L + G++E+A+ E KG P
Sbjct: 358 HWLYDKGRVEDALRYFGEMENKGMVPE 384
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 154/327 (47%), Gaps = 38/327 (11%)
Query: 105 VFLQKLKGKGVIEDAL--WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAK- 161
V + + G ++E+A+ +N +L L++ +L +L + KH +VA+
Sbjct: 77 VLVNRYAGAHMVEEAIGAFNKRRELGLEL--------DLVSFQKLLMYLCRYKHVDVAET 128
Query: 162 -----------DVKSYNVIVKA---LGR-RKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
D+K+ N+++ LG R+ F ++++ K PD+ T +
Sbjct: 129 LLHSKGHEFGVDIKTMNIVLNGWCVLGNVREAKRFWKDIIASKCK----PDVFTYGTFIK 184
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLF 265
+ G++ A+++ + K D N V+ LC + V A ++F MK + +
Sbjct: 185 ALTNKGKLGTAMKLYEAMWKMQCKPDVVICNCVIDALCFKKRVPEALAVFEGMKERGCIP 244
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS--PDSLTFSFLIEGLGRAGRIDDAIE 323
NV TYN +I K+G++ ++ +L E+ + S PD +TF++L++ L + ++
Sbjct: 245 NVATYNSLIKHMCKIGRMEKVYELLDEMQEKKGSCMPDEITFNYLLKSLKKP---EEVAG 301
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY-YKGMSSYNCEPNMDTYTRLISGL 382
V + MK GC + + N ++ + D +E ++Y ++ M + +YT +I L
Sbjct: 302 VLERMKINGCKMNNDTCNLLLKLHAD-WDSEEKVRYTWEEMEKNGLGLDRRSYTIMIHWL 360
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGT 409
+V DAL F EM ++G+VP T
Sbjct: 361 YDKGRVEDALRYFGEMENKGMVPEPRT 387
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 179/375 (47%), Gaps = 6/375 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ AL + D V M GV+PDL T +I + SF + + A+++L L
Sbjct: 87 AYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRAL 146
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
G A + V+ L H A LF+ M +F N+ +N V+ K G V
Sbjct: 147 PHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDV 202
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+E +L +++ G S + T++ I GL AGR+ +A+ + D M+ PD YN +
Sbjct: 203 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTL 261
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I E M Y + M + C P+ TY +I G K V +A E+ ++ + +G
Sbjct: 262 IRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGF 321
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
VP T S + LC+ G A+ ++ +A+ G K + Y L++ L G L
Sbjct: 322 VPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ 381
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ +EM E G D + Y VI GLC +G + +A +VM +++ KG+ P ++ L +
Sbjct: 382 VMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYC 441
Query: 524 ASNKLESAYNLFRKI 538
KL+SA L ++
Sbjct: 442 KRLKLDSALQLVERM 456
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 177/373 (47%), Gaps = 1/373 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ + +L D +G PD T +++ G V +A+++
Sbjct: 292 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 351
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
+ G+K D N ++ LC + + A + N M + ++ TYNIVI+G K+G +
Sbjct: 352 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 411
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ V+ + + +G+ PD TF+ LI+G + ++D A+++ + M E G PDT YN+V
Sbjct: 412 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 471
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
++ G +E + ++ M C PN TY LI +S K+ +A +V +M G+
Sbjct: 472 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 531
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P + + + C G A ++++K + G + + L+ SG M
Sbjct: 532 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 591
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
++ EM G+ +D Y +I G C ++ A + + E ++KGF PS + ++ N L
Sbjct: 592 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 651
Query: 524 ASNKLESAYNLFR 536
++++ A +
Sbjct: 652 VNHRVFQAVGIIH 664
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 186/385 (48%), Gaps = 2/385 (0%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H +V ++ ++N ++ AL +R +L + + G++ +L T +I + AG++
Sbjct: 179 HTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLP 238
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQR-LHVGAASSLFNSMKGKVLFNVMTYNIVI 274
+A++++ + + + D + N ++ LC++ + A L M L + TYN +I
Sbjct: 239 EAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTII 297
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ K+ V E +LK+ V +GF PD +T+ LI GL G ++ A+E+F+ + KG
Sbjct: 298 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 357
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN+++ G ++ M+ C P++ TY +I+GL K ++DA V
Sbjct: 358 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 417
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ + +G +P T + ++ C +A+ + ++ + G Y +L L
Sbjct: 418 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 477
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK + + + EM G + Y +I C ++E A V+ + ++G P +
Sbjct: 478 AGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVS 537
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
++ L + LE AY LF+K++
Sbjct: 538 FNTLIYGFCRNGDLEGAYLLFQKLE 562
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 174/367 (47%), Gaps = 10/367 (2%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
E + FN A + + D+ YN +VK L + V+++MA+EG +PD++T +I
Sbjct: 342 ERALELFNEA-QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNI 400
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
V++ + G + A ++ G D + N ++ C+RL + +A L M +
Sbjct: 401 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 460
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ + +TYN V++G K G+V E+ +E++ +G P+ +T++ LIE R+ ++++A
Sbjct: 461 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEAS 520
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+V M ++G PD ++N +I + GD + ++ + DT+ LI
Sbjct: 521 KVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAF 580
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+ A ++F+EML +G + T ++ C A M + K G S+
Sbjct: 581 SGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSM 640
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV--LVM 500
+ + ++ L+ + + + H M + G + V+ + N + E A +++
Sbjct: 641 STFGRVINSLTVNHRVFQAVGIIHIMVKIG------VVPEVVDTILNADKKEIAAPKILV 694
Query: 501 EESLRKG 507
E+ ++KG
Sbjct: 695 EDLMKKG 701
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 109/296 (36%), Gaps = 65/296 (21%)
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I RAGR+ DA++ F+ M C P AYNA++ + D+ K Y M +
Sbjct: 57 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 116
Query: 369 EPNMDTYT-------------------------------RLISGLLKSRKVADALEVFEE 397
P++ T+T ++ GL DA ++F++
Sbjct: 117 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQ 176
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS---- 453
ML + P+ L LC G A ++ K + G ++L Y + +R L
Sbjct: 177 MLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGR 236
Query: 454 ---------------------------GFGKCGMLLDLWH---EMQESGYPSDGEIYEYV 483
G K M + H M G D Y +
Sbjct: 237 LPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI 296
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I G C I ++ A ++++++ KGF P ++ Y L N L A +E A LF + +
Sbjct: 297 IDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 352
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 185/377 (49%), Gaps = 3/377 (0%)
Query: 161 KDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
K+V ++ +++ L + + M K+G P+ T +++++ F + +V++A +
Sbjct: 5 KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLL 64
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSK 279
L +++ GL + + + V+ C++ V A LF M + + N++TYN ++SG +
Sbjct: 65 LKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCR 124
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G + E +L E+ G PD ++ L+ GL + G+ID A++VF+ C PD A
Sbjct: 125 NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 184
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y+ +I+ G DE K ++ M +CEP++ T+T L+ GL K ++ +A +V E M
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 244
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
DR P+ T +S ++ LC G A ++K+ G + ++ Y L+
Sbjct: 245 DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVD 304
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRLVYSKL 518
L L EM +G D Y +I GLC G+ A + + ++ FC P + YS L
Sbjct: 305 SALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGD-MKAKFCNPDVITYSCL 363
Query: 519 SNKLLASNKLESAYNLF 535
+++ A LF
Sbjct: 364 IGGFCKLERIDMARTLF 380
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 184/381 (48%), Gaps = 5/381 (1%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N +V +Y+ ++ L + V M G+ P++ T + ++ F V A
Sbjct: 247 NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 306
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISG 276
+ ++ + G D + N ++ LC+ A+ LF MK K +V+TY+ +I G
Sbjct: 307 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGG 366
Query: 277 WSKLGQVVEMERVL-KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
+ KL + ++M R L +++ + PD +TFS L+EG AG +DDA + + M C P
Sbjct: 367 FCKL-ERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSP 425
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D Y +++ + VG E + K M+ C+PN+ TYT LI ++ K A ++
Sbjct: 426 DVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLL 485
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGP-PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
EEM+ G+ P+ T S + C G A M+ + R CK + AY++++ L
Sbjct: 486 EEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCR 545
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE-SLRKGFCPSRL 513
G+ L+L +++SG P +IY +I GLC +L A+ V+EE +L + P+
Sbjct: 546 TGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAE 605
Query: 514 VYSKLSNKLLASNKLESAYNL 534
Y + +L + E A L
Sbjct: 606 AYEAVIQELAREGRHEEANAL 626
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 176/384 (45%), Gaps = 2/384 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ DV +Y+ ++ L + D C + M + PD+ T + +MD + ++ +A
Sbjct: 177 DCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEA 236
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
Q+L +ED + + + ++ LC+ V A +F M + + NV+TYN +I G
Sbjct: 237 QQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHG 296
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ V +++E+ A G PD +T++ LI+GL + GR +A +F MK K C PD
Sbjct: 297 FCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPD 356
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y+ +I + + D + M P++ T++ L+ G + V DA + E
Sbjct: 357 VITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLE 416
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
EM+ P T TS ++ C G A + K+ K GC+ ++ Y L+ G
Sbjct: 417 EMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAG 476
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL-VY 515
K + L EM +G + Y +I G C G LE A ++E R C + + Y
Sbjct: 477 KPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAY 536
Query: 516 SKLSNKLLASNKLESAYNLFRKIK 539
+ + L + ++ +A L IK
Sbjct: 537 RVMMDGLCRTGRMSAALELLEAIK 560
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 203/443 (45%), Gaps = 13/443 (2%)
Query: 97 LPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKH 156
LPE + K+K KG + + W NV ++ V+R L + M K
Sbjct: 23 LPEAT---TYFAKMKKKGTVPNE-WTYNVLINGFCKVHKVHRAYLLLKEM--------KE 70
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
+A +V +Y+ ++ R+ D + M + G P+L T + ++ R G + +
Sbjct: 71 SGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDE 130
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF-NSMKGKVLFNVMTYNIVIS 275
A ++L + + GL+ D S + ++ LC+ + A +F ++ G +V+ Y+ +I+
Sbjct: 131 AYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIA 190
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G K G++ E ++ +++ PD +TF+ L++GL + R+ +A +V +TM+++ C P
Sbjct: 191 GLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTP 250
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+ Y+++I G + + +K M EPN+ TY LI G + V AL +
Sbjct: 251 NVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLM 310
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
EEM G +P T + ++ LC G A ++ + C + Y L+
Sbjct: 311 EEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKL 370
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
+ M L+ +M + D + ++ G CN G +++A ++EE + P Y
Sbjct: 371 ERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTY 430
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
+ L + ++ A + +++
Sbjct: 431 TSLVDGFCKVGRMVEARRVLKRM 453
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 171/341 (50%), Gaps = 1/341 (0%)
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
T +I++D +A ++ +A +++ G + + NV++ C+ V A L M
Sbjct: 9 TWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEM 68
Query: 260 KGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
K L NV+TY+ VI G+ + +V ++ +++V G P+ +T++ L+ GL R G +
Sbjct: 69 KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLM 128
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
D+A E+ D M+E+G PD +Y+ +++ G D +K ++ S+ +C P++ Y+ L
Sbjct: 129 DEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTL 188
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I+GL K+ ++ +A ++FE+M + P T T+ ++ LC A + + C
Sbjct: 189 IAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNC 248
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
++ Y L+ L G+ +++ M G + Y +I G C +++A+L
Sbjct: 249 TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALL 308
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+MEE G P + Y+ L + L + + A LF +K
Sbjct: 309 LMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMK 349
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 176/390 (45%), Gaps = 7/390 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ + D SY+ ++ L + D V D + PD+ S ++ + G+
Sbjct: 138 MRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGR 197
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
+ +A ++ ++ + + D + ++ LC+ + A + +M+ + NV+TY+
Sbjct: 198 LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 257
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G K GQV + + V K ++ G P+ +T++ LI G +D A+ + + M G
Sbjct: 258 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 317
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
C PD YN +I G E + + M + C P++ TY+ LI G K ++ A
Sbjct: 318 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 377
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+F++ML + ++P T ++ +E C+ G A + ++ C + Y L +
Sbjct: 378 TLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSL---V 434
Query: 453 SGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
GF K G +++ + M + G + Y +I C G+ A ++EE + G
Sbjct: 435 DGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQ 494
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P+ + Y L + LE A + +++
Sbjct: 495 PNVITYRSLIGGFCGTGDLEEARKMLERLE 524
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 132/275 (48%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
NV+T+ I+I G K ++ E ++ +G P+ T++ LI G + ++ A +
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
MKE G P+ Y+ VI + D K ++ M C PN+ TY L+SGL ++
Sbjct: 66 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+ +A E+ +EM +RG+ P + + + LC G A+ +++ C + AY
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ L G+ L+ +M+E+ D + ++ GLC +L+ A V+E
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+ P+ + YS L + L + ++ A +F+++ +
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIV 280
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 180/376 (47%), Gaps = 1/376 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+ N++V + + FD V+S+M K V PD+ T ++++D+ RAG V AI ++ +
Sbjct: 159 TLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ GLK + N VL LC+ A +F +M + V +V ++NI+I G+ ++G+V
Sbjct: 219 ANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEV 278
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E + KE+ +PD ++FS LI R G +D A MK G PD Y V
Sbjct: 279 KEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMV 338
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I + G E ++ M + C P++ TY L++GL K ++ DA ++ EM +RG+
Sbjct: 339 IGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGV 398
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P T T+ + C G A+ ++ + + + Y L+ + G +
Sbjct: 399 TPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANE 458
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
LW +M + Y +I C GQ+E+A ++E ++KG P+ Y+ +
Sbjct: 459 LWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYC 518
Query: 524 ASNKLESAYNLFRKIK 539
S ++ +K++
Sbjct: 519 RSGNVKKGQQFLQKMR 534
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 199/459 (43%), Gaps = 23/459 (5%)
Query: 96 LLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIK 155
++ E R VF + +I+ +VD ++ +V + NRG G ++ +N +K
Sbjct: 179 VISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPG---IVTYNSVLK 235
Query: 156 -------------------HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNP 196
+VA DV+S+N+++ R +M V P
Sbjct: 236 GLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTP 295
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
D+ + S ++ F R G++ A L ++ GL D +V+ C+ + A +
Sbjct: 296 DVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVR 355
Query: 257 NSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
+ M G L +V+TYN +++G K ++++ E++L E+ G +PD TF+ LI G R
Sbjct: 356 DEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQ 415
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
G ++A+++FDT+ + PD YN++I GD + + + M + PN TY
Sbjct: 416 GNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITY 475
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
+ LI + +V DA +EM+ +G +P+ T S ++ C G +K R+
Sbjct: 476 SILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQ 535
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
L + L+ ++++ M++ D Y +I G G +++
Sbjct: 536 DNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQD 595
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
A V + G P R Y L N + + + A+ L
Sbjct: 596 AGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQL 634
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 148/311 (47%), Gaps = 9/311 (2%)
Query: 230 KFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMER 288
+ +A +LN+++ C+ L A ++ + M+ + +F +V+T+N++I + G V
Sbjct: 154 EVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIA 213
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
++ + G P +T++ +++GL + R D A EVF TM + PD ++N +I +
Sbjct: 214 LVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFC 273
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD-ALEVFEEMLDRGIVPST 407
VG+ E +K+YK M P++ +++ LI GL R D A EM G+VP
Sbjct: 274 RVGEVKEAVKFYKEMQHRYVTPDVVSFSCLI-GLFSRRGEMDHAGAYLREMKGLGLVPDG 332
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---L 464
T + C G A+ + + GC + Y L L+G K LLD L
Sbjct: 333 VIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTL---LNGLCKQHRLLDAEKL 389
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+EM+E G D + +I G C G ENA+ + + LR+ P + Y+ L + +
Sbjct: 390 LNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCR 449
Query: 525 SNKLESAYNLF 535
L A L+
Sbjct: 450 KGDLAKANELW 460
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 164/365 (44%), Gaps = 7/365 (1%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F ++H V DV S++ ++ RR D L +M G+ PD ++V+ F
Sbjct: 284 FYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFC 343
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVM 268
RAG + +A+++ + FG D + N +L LC++ + A L N M+ + V ++
Sbjct: 344 RAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLC 403
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
T+ +I G+ + G ++ ++ + PD +T++ LI+G+ R G + A E++D M
Sbjct: 404 TFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDM 463
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ P+ Y+ +I ++ G ++ + M PN+ TY +I G +S V
Sbjct: 464 HAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNV 523
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+ ++M + P T + + H A ++ K + Y ++
Sbjct: 524 KKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMI 583
Query: 449 LRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
++GF + G + D ++ M +SG D Y +I G G + A + +E +
Sbjct: 584 ---INGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIH 640
Query: 506 KGFCP 510
+GF P
Sbjct: 641 RGFAP 645
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 109/265 (41%), Gaps = 5/265 (1%)
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+GW L Q + +++ ++ T + ++ + D A V M+++
Sbjct: 135 AGWPHLAQ-----EAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVF 189
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD +N +I GD D + M++ +P + TY ++ GL K R+ A EV
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEV 249
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F M + P + + C G A+ YK+ + + ++ L+ S
Sbjct: 250 FRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSR 309
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G+ EM+ G DG IY VI G C G + A+ V +E + G P +
Sbjct: 310 RGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVT 369
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
Y+ L N L ++L A L +++
Sbjct: 370 YNTLLNGLCKQHRLLDAEKLLNEME 394
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 99/251 (39%)
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
++ ++A +P F LI ++ + +A E F + + +A NA+++
Sbjct: 74 IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLS 133
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTG 408
G + Y+ + S + E N T ++ K+ + A V EM R + P
Sbjct: 134 RAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVV 193
Query: 409 TITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM 468
T ++ G AA+ + G K + Y +L+ L + +++ M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTM 253
Query: 469 QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
+ D + +I G C +G+++ AV +E + P + +S L ++
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEM 313
Query: 529 ESAYNLFRKIK 539
+ A R++K
Sbjct: 314 DHAGAYLREMK 324
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 179/375 (47%), Gaps = 6/375 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ AL + D V M GV+PDL T +I + SF + + A+++L L
Sbjct: 88 AYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRAL 147
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
G A + V+ L H A LF+ M +F N+ +N V+ K G V
Sbjct: 148 PHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDV 203
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+E +L +++ G S + T++ I GL AGR+ +A+ + D M+ PD YN +
Sbjct: 204 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTL 262
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I E M Y + M + C P+ TY +I G K V +A E+ ++ + +G
Sbjct: 263 IRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGF 322
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
VP T S + LC+ G A+ ++ +A+ G K + Y L++ L G L
Sbjct: 323 VPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ 382
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ +EM E G D + Y VI GLC +G + +A +VM +++ KG+ P ++ L +
Sbjct: 383 VMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYC 442
Query: 524 ASNKLESAYNLFRKI 538
KL+SA L ++
Sbjct: 443 KRLKLDSALQLVERM 457
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 177/373 (47%), Gaps = 1/373 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ + +L D +G PD T +++ G V +A+++
Sbjct: 293 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 352
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
+ G+K D N ++ LC + + A + N M + ++ TYNIVI+G K+G +
Sbjct: 353 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 412
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ V+ + + +G+ PD TF+ LI+G + ++D A+++ + M E G PDT YN+V
Sbjct: 413 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 472
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
++ G +E + ++ M C PN TY LI +S K+ +A +V +M G+
Sbjct: 473 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 532
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P + + + C G A ++++K + G + + L+ SG M
Sbjct: 533 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 592
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
++ EM G+ +D Y +I G C ++ A + + E ++KGF PS + ++ N L
Sbjct: 593 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 652
Query: 524 ASNKLESAYNLFR 536
++++ A +
Sbjct: 653 VNHRVFQAVGIIH 665
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 186/385 (48%), Gaps = 2/385 (0%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H +V ++ ++N ++ AL +R +L + + G++ +L T +I + AG++
Sbjct: 180 HTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLP 239
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQR-LHVGAASSLFNSMKGKVLFNVMTYNIVI 274
+A++++ + + + D + N ++ LC++ + A L M L + TYN +I
Sbjct: 240 EAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTII 298
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ K+ V E +LK+ V +GF PD +T+ LI GL G ++ A+E+F+ + KG
Sbjct: 299 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 358
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN+++ G ++ M+ C P++ TY +I+GL K ++DA V
Sbjct: 359 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 418
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ + +G +P T + ++ C +A+ + ++ + G Y +L L
Sbjct: 419 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 478
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK + + + EM G + Y +I C ++E A V+ + ++G P +
Sbjct: 479 AGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVS 538
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
++ L + LE AY LF+K++
Sbjct: 539 FNTLIYGFCRNGDLEGAYLLFQKLE 563
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 174/367 (47%), Gaps = 10/367 (2%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
E + FN A + + D+ YN +VK L + V+++MA+EG +PD++T +I
Sbjct: 343 ERALELFNEA-QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNI 401
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
V++ + G + A ++ G D + N ++ C+RL + +A L M +
Sbjct: 402 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 461
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ + +TYN V++G K G+V E+ +E++ +G P+ +T++ LIE R+ ++++A
Sbjct: 462 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEAS 521
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+V M ++G PD ++N +I + GD + ++ + DT+ LI
Sbjct: 522 KVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAF 581
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+ A ++F+EML +G + T ++ C A M + K G S+
Sbjct: 582 SGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSM 641
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV--LVM 500
+ + ++ L+ + + + H M + G + V+ + N + E A +++
Sbjct: 642 STFGRVINSLTVNHRVFQAVGIIHIMVKIG------VVPEVVDTILNADKKEIAAPKILV 695
Query: 501 EESLRKG 507
E+ ++KG
Sbjct: 696 EDLMKKG 702
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 109/296 (36%), Gaps = 65/296 (21%)
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I RAGR+ DA++ F+ M C P AYNA++ + D+ K Y M +
Sbjct: 58 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 117
Query: 369 EPNMDTYT-------------------------------RLISGLLKSRKVADALEVFEE 397
P++ T+T ++ GL DA ++F++
Sbjct: 118 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQ 177
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS---- 453
ML + P+ L LC G A ++ K + G ++L Y + +R L
Sbjct: 178 MLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGR 237
Query: 454 ---------------------------GFGKCGMLLDLWH---EMQESGYPSDGEIYEYV 483
G K M + H M G D Y +
Sbjct: 238 LPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI 297
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I G C I ++ A ++++++ KGF P ++ Y L N L A +E A LF + +
Sbjct: 298 IDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 353
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/501 (23%), Positives = 233/501 (46%), Gaps = 29/501 (5%)
Query: 51 DEHHVLKELSDLFQISSHNSF---PNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFL 107
DEH + L F ++ ++F P V + V RI S++ PE R+
Sbjct: 73 DEHASAEPLR--FTVTPGDAFGDGPPVGISEAAKMVCRIVSTQ-------PEPRIASTL- 122
Query: 108 QKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYN 167
DAL V +S ++V +V+ + +G + FF WA + + + ++
Sbjct: 123 ----------DAL---GVAMSPELVAEVLKNLSNAGMLALAFFRWAERQEGFSYTAEGFH 169
Query: 168 VIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDF 227
+++ALG+ K F + +++ M G+ +T +++ + RA +V +A++ ++ F
Sbjct: 170 NLIEALGKIKQFKLVWSLVETMRCRGLLSK-DTFKLIVRRYARARKVKEAVETFEKMSIF 228
Query: 228 GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLGQVVE 285
GLK + N ++ L + V A +++ MK GK + ++ TY +++ GW ++
Sbjct: 229 GLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLM 288
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
++ + +E++ G PD + + LI ++G+ D+AI+VF M+ GC P + Y +I+
Sbjct: 289 VKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLIN 348
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
S DE +KY++ + T ++ ++ K A ++ +EM + I P
Sbjct: 349 GLGSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGP 408
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
++ T L L A ++++ GC+ L Y +++ G+ M L++W
Sbjct: 409 NSRTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMALNVW 468
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
+M E G ++ +I GLC +LE A + +E L KG P ++S L L+
Sbjct: 469 KQMGERGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEG 528
Query: 526 NKLESAYNLFRKIKIARQNDY 546
++ A + K+ R+ +
Sbjct: 529 GRISLAQEMASKLDAIRKTPF 549
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 208/498 (41%), Gaps = 11/498 (2%)
Query: 38 ELLSNQKKNMSSLDE----HHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVD 93
E N KK+ S DE VL S+ + SH S+ S++ +S
Sbjct: 37 EWFRNPKKDGDSFDEDDHDEFVLPIKSNPVEERSHGG------GSKPLSIRPEAASHEEA 90
Query: 94 EFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWA 153
EF + + I A+ V +S +V K++ R A FF WA
Sbjct: 91 EFEADFDEASRILTSCFASPEAIVIAMDCCPVRVSDRMVDKILRRFGSDWVAAFGFFMWA 150
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
SYN +V LG+ K FD M ++S M + G L T++ VM A +
Sbjct: 151 GAQEGYRHSADSYNSMVDILGKFKQFDLMWGLISQMDEIGGLVSLATMTKVMRRLAGASR 210
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
AI +++ FG+ D ++NV+L LC+ V A F ++G V + ++N +
Sbjct: 211 WTDAIDAFNKMDQFGVVKDTTAMNVLLDTLCKERSVKRARGAFQELRGSVPPDESSFNTL 270
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
+ GW K + E ++KE+ GF P +T++ LIE + + M+ KGC
Sbjct: 271 VHGWCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGC 330
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
P+ Y V+ G E + + + C P+ Y LI L ++ ++ DA
Sbjct: 331 PPNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANS 390
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
V ++M G+ P+ T + + C + A+ M K + CK + Y LL+
Sbjct: 391 VVDKMRMTGVRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPDIKTYTPLLKLCC 450
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
+L L M D Y ++ LC G+ + L +EE + KGF P +
Sbjct: 451 KRQWIKVLRFLICHMFRKDITPDFSTYTLLVTWLCRNGKPAQSCLFLEEMVLKGFAPKKE 510
Query: 514 VYSKLSNKLLASNKLESA 531
+ ++ KL +N L SA
Sbjct: 511 TFDLVAEKLDKAN-LHSA 527
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 120/271 (44%), Gaps = 1/271 (0%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
+YN ++ K Q M ++ ++ G T + ++ L A R DAI+ F+ M
Sbjct: 162 SYNSMVDILGKFKQFDLMWGLISQMDEIGGLVSLATMTKVMRRLAGASRWTDAIDAFNKM 221
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ G DT A N ++ ++ + + P+ ++ L+ G K+R +
Sbjct: 222 DQFGVVKDTTAMNVLLDTLCKERSVKRARGAFQELRG-SVPPDESSFNTLVHGWCKARMM 280
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A ++ +EM + G PS T TS +E C + + R GC ++ Y ++
Sbjct: 281 NEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITYTIV 340
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L G+ LD++ +++ G D Y +I L G+LE+A V+++ G
Sbjct: 341 MHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVDKMRMTGV 400
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P+ ++ L + ++ E+A + K++
Sbjct: 401 RPTVATFNTLISAACDHSQAENALKMLVKME 431
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 179/375 (47%), Gaps = 6/375 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ AL + D V M GV+PDL T +I + SF + + A+++L L
Sbjct: 90 AYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRAL 149
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
G A + V+ L H A LF+ M +F N+ +N V+ K G V
Sbjct: 150 PHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDV 205
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+E +L +++ G S + T++ I GL AGR+ +A+ + D M+ PD YN +
Sbjct: 206 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTL 264
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I E M Y + M + C P+ TY +I G K V +A E+ ++ + +G
Sbjct: 265 IRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGF 324
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
VP T S + LC+ G A+ ++ +A+ G K + Y L++ L G L
Sbjct: 325 VPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ 384
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ +EM E G D + Y VI GLC +G + +A +VM +++ KG+ P ++ L +
Sbjct: 385 VMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYC 444
Query: 524 ASNKLESAYNLFRKI 538
KL+SA L ++
Sbjct: 445 KRLKLDSALQLVERM 459
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 177/373 (47%), Gaps = 1/373 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ + +L D +G PD T +++ G V +A+++
Sbjct: 295 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 354
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
+ G+K D N ++ LC + + A + N M + ++ TYNIVI+G K+G +
Sbjct: 355 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 414
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ V+ + + +G+ PD TF+ LI+G + ++D A+++ + M E G PDT YN+V
Sbjct: 415 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 474
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
++ G +E + ++ M C PN TY LI +S K+ +A +V +M G+
Sbjct: 475 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 534
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P + + + C G A ++++K + G + + L+ SG M
Sbjct: 535 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 594
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
++ EM G+ +D Y +I G C ++ A + + E ++KGF PS + ++ N L
Sbjct: 595 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 654
Query: 524 ASNKLESAYNLFR 536
++++ A +
Sbjct: 655 VNHRVFQAVGIIH 667
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 186/385 (48%), Gaps = 2/385 (0%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H +V ++ ++N ++ AL +R +L + + G++ +L T +I + AG++
Sbjct: 182 HTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLP 241
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQR-LHVGAASSLFNSMKGKVLFNVMTYNIVI 274
+A++++ + + + D + N ++ LC++ + A L M L + TYN +I
Sbjct: 242 EAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTII 300
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ K+ V E +LK+ V +GF PD +T+ LI GL G ++ A+E+F+ + KG
Sbjct: 301 DGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIK 360
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN+++ G ++ M+ C P++ TY +I+GL K ++DA V
Sbjct: 361 PDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 420
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ + +G +P T + ++ C +A+ + ++ + G Y +L L
Sbjct: 421 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 480
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK + + + EM G + Y +I C ++E A V+ + ++G P +
Sbjct: 481 AGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVS 540
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
++ L + LE AY LF+K++
Sbjct: 541 FNTLIYGFCRNGDLEGAYLLFQKLE 565
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 172/362 (47%), Gaps = 10/362 (2%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FN A + + D+ YN +VK L + V+++MA+EG +PD++T +IV++
Sbjct: 350 LFNEA-QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 408
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNV 267
+ G + A ++ G D + N ++ C+RL + +A L M + + +
Sbjct: 409 CKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDT 468
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TYN V++G K G+V E+ +E++ +G P+ +T++ LIE R+ ++++A +V
Sbjct: 469 ITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVK 528
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M ++G PD ++N +I + GD + ++ + DT+ LI
Sbjct: 529 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLN 588
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ A ++F+EML +G + T ++ C A M + K G S++ +
Sbjct: 589 MHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGR 648
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV--LVMEESLR 505
++ L+ + + + H M + G + V+ + N + E A +++E+ ++
Sbjct: 649 VINSLTVNHRVFQAVGIIHIMVKIG------VVPEVVDTILNADKKEIAAPKILVEDLMK 702
Query: 506 KG 507
KG
Sbjct: 703 KG 704
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 109/296 (36%), Gaps = 65/296 (21%)
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I RAGR+ DA++ F+ M C P AYNA++ + D+ K Y M +
Sbjct: 60 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 119
Query: 369 EPNMDTYT-------------------------------RLISGLLKSRKVADALEVFEE 397
P++ T+T ++ GL DA ++F++
Sbjct: 120 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQ 179
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS---- 453
ML + P+ L LC G A ++ K + G ++L Y + +R L
Sbjct: 180 MLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGR 239
Query: 454 ---------------------------GFGKCGMLLDLWH---EMQESGYPSDGEIYEYV 483
G K M + H M G D Y +
Sbjct: 240 LPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTI 299
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I G C I ++ A ++++++ KGF P ++ Y L N L A +E A LF + +
Sbjct: 300 IDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 355
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 199/429 (46%), Gaps = 1/429 (0%)
Query: 119 ALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKF 178
AL + V+ + +++ +++NR + F WA Y+++V LGRRK
Sbjct: 121 ALNDCGVNPTNNLISQLLNRFCNDWVPALGLFTWAKHQTGYVHPPDLYDLMVDILGRRKK 180
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNV 238
F FM ++ +M L T+ VM RAG A++ +E G++ D E+LNV
Sbjct: 181 FSFMWELVKEMENLEGYVSLVTMKKVMRRLARAGNFQDAVEAFRGIEKLGVRKDIEALNV 240
Query: 239 VLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
++ L + V A S F K + + ++NI++ G+ K ++ + +++ E+ +GF
Sbjct: 241 LMDALVKEGSVEHAYSAFMEFKDSIHVDFQSFNILLHGYCKARKLDDARKIMDEMDKQGF 300
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
P+ ++++ IE + + +F M+EK C P+ Y + ++ ++
Sbjct: 301 QPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNKALE 360
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
Y+ M S C P+ Y+ LI L +S ++ DA +VFE+M +G+ P T + + C
Sbjct: 361 VYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMITSAC 420
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
++ A+ + ++ + CK + Y LL+ + +L L + M ++ D
Sbjct: 421 THLEEENALKLLRRMEEDSCKPDIQTYAPLLKMCCRKKRIKVLKFLLNHMFKNNISIDLG 480
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y ++ GLC G+LE A EE + KG P Y L + L N L A +K+
Sbjct: 481 TYVLLVGGLCKSGKLELACSFFEEMVMKGLIPRDRTYKMLVEE-LEQNNLTEAKEKIQKL 539
Query: 539 KIARQNDYA 547
++ A
Sbjct: 540 MFQTEDQTA 548
>gi|15223927|ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g71060, mitochondrial; Flags: Precursor
gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Arabidopsis thaliana]
gi|332197036|gb|AEE35157.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 214/431 (49%), Gaps = 7/431 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L +V LS ++ +V+ + + +G + F WA +YN ++++LG+
Sbjct: 81 VETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGK 140
Query: 176 RKFFDFMCNVLSDM-AKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
K F + +++ DM AK+ ++ ET +++ + RA +V +AI ++E+FG K ++
Sbjct: 141 IKQFKLIWSLVDDMKAKKLLSK--ETFALISRRYARARKVKEAIGAFHKMEEFGFKMESS 198
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEI 293
N +L L + +VG A +F+ MK K ++ +Y I++ GW + ++ ++ V +E+
Sbjct: 199 DFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREM 258
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
EGF PD + + +I +A + ++AI F+ M+++ C P + + ++I+ S
Sbjct: 259 KDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKL 318
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
++ +++++ S TY L+ S+++ DA + +EM +G+ P+ T
Sbjct: 319 NDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDII 378
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
L L A +Y+ + C+ +++ Y++++R + M + +W EM+ G
Sbjct: 379 LHHLIRMQRSKEAYEVYQ---TMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGV 435
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
++ +I LC+ +L+ A E L G P ++S+L LL + + +
Sbjct: 436 LPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTD 495
Query: 534 LFRKIKIARQN 544
L K+ R+
Sbjct: 496 LVVKMDRLRKT 506
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 188/409 (45%), Gaps = 1/409 (0%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
VVG+V+ + + +A V FF+W P + N ++ A R+K ++ +
Sbjct: 101 VVGRVLQQLDDLDKA-VKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHR 159
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+PD T S +++ F +A +A ++L +E G+ N ++ LC V
Sbjct: 160 CGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVD 219
Query: 251 AASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
+A + M+ +V+TY I++ K ++ + +L++++ G +P+ +T++ LI
Sbjct: 220 SALVHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLIN 279
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
G + G +D+A+ +F+ M E C PD YN +I Y + K + M Y CEP
Sbjct: 280 GFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEP 339
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
N TY L+ L+KS K DA + + ML R PS T ++ C G A ++
Sbjct: 340 NFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELF 399
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
+ GC + Y +++ + L M E+G P D Y +++GLC
Sbjct: 400 QLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKA 459
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Q++ A V E G+ + S L + L S +L+ A L R+++
Sbjct: 460 SQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREME 508
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 178/375 (47%), Gaps = 3/375 (0%)
Query: 165 SYNVIVKALGRR-KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+YN ++ +L + K+ D N+ M + P T ++++D F + GQ+ A ++
Sbjct: 343 TYNTLMDSLVKSGKYIDAF-NLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQL 401
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQ 282
+ D G D + N+++ C+ + A L M + +V+TYN ++SG K Q
Sbjct: 402 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 461
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V E V + + G+ D +T S LI+GL ++ R+DDA ++ M+ G PD AY
Sbjct: 462 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 521
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I + D+ + ++ M C P + TY+ +I L KS +V D + + ML+RG
Sbjct: 522 LIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 581
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
+ P TS ++ LC A +YK ++ GC ++ Y +L+ +L + +
Sbjct: 582 VTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAI 641
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
L M+ G D Y V G + + A + + +G P+ +YS L KL
Sbjct: 642 HLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKL 701
Query: 523 LASNKLESAYNLFRK 537
+A K++ A ++ +
Sbjct: 702 VAEEKMDQAMEIWEE 716
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 185/386 (47%), Gaps = 7/386 (1%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N A V +Y ++V AL + +L DM + G P++ T + +++ F + G + +A
Sbjct: 231 NCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEA 290
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG 276
+ + ++ + D + N+++ C++ + L M K N +TYN ++
Sbjct: 291 VVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDS 350
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K G+ ++ + + ++ P TF+ +I+ + G++D A E+F M ++GC PD
Sbjct: 351 LVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPD 410
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN +IS D+ + + M+ C P++ TY ++SGL K+ +V +A EV+E
Sbjct: 411 IYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYE 470
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+ + G T ++ ++ LC A + ++ + G + AY +L+ GF
Sbjct: 471 VLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIH---GFC 527
Query: 457 KCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
K L L + EM + G Y VI LC ++ + ++++ L +G P +
Sbjct: 528 KADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAI 587
Query: 514 VYSKLSNKLLASNKLESAYNLFRKIK 539
VY+ + + L S+ + AY L++ +K
Sbjct: 588 VYTSVIDGLCKSDSYDEAYELYKLMK 613
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 194/402 (48%), Gaps = 4/402 (0%)
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
GN+ EA+VLF N +++ + + DV +YN+++ +++ +L +M K G P+
Sbjct: 285 GNMD-EAVVLF-NQMLEN-SCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNF 341
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
T + +MDS +++G+ A + + K + N+++ C+ + A LF
Sbjct: 342 ITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQL 401
Query: 259 MKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
M + L ++ TYNI+ISG + ++ + ++L+ + G PD +T++ ++ GL +A +
Sbjct: 402 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 461
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
+D+A EV++ ++ G D + +I D+ K + M P++ YT
Sbjct: 462 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 521
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
LI G K+ ++ +L F EMLD+G VP+ T + ++ LC M+ K + G
Sbjct: 522 LIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 581
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
Y ++ L +L+ M+++G Y ++ LC + +L+ A+
Sbjct: 582 VTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAI 641
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++E G P + Y+ + + S + + A+ LF+ +K
Sbjct: 642 HLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMK 683
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 175/374 (46%), Gaps = 2/374 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN I+K L D DM + P + T +I++D+ ++ ++ A +L +
Sbjct: 205 YNTIIKGLCDNGRVDSALVHYRDMQR-NCAPSVITYTILVDALCKSARISDASLILEDMI 263
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVV 284
+ G + + N ++ C+ ++ A LFN M + +V TYNI+I G+ K +
Sbjct: 264 EAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQ 323
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ ++L+E+V G P+ +T++ L++ L ++G+ DA + M + C P +N +I
Sbjct: 324 DGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMI 383
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ VG D + ++ M+ C P++ TY +ISG ++ ++ DA ++ E M + G
Sbjct: 384 DMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCP 443
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P T S + LC A +Y+ R G L + L+ L + L
Sbjct: 444 PDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKL 503
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
EM+ +G D Y +I G C QL+ ++ E L KG P+ + YS + +KL
Sbjct: 504 LREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCK 563
Query: 525 SNKLESAYNLFRKI 538
S ++ L + +
Sbjct: 564 SARVRDGCMLLKTM 577
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 147/319 (46%), Gaps = 1/319 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +YN+++ R D +L M + G PD+ T + ++ +A QV +A ++
Sbjct: 410 DIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY 469
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
L + G D + + ++ LC+ + A L M + +V+ Y I+I G+ K
Sbjct: 470 EVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKA 529
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
Q+ + E++ +G P +T+S +I+ L ++ R+ D + TM E+G PD Y
Sbjct: 530 DQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVY 589
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+VI +DE + YK M C P + TY L+ L K ++ +A+ + E M
Sbjct: 590 TSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMES 649
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G +P T T S + A +++ + GC + Y LLL +L K
Sbjct: 650 DGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQ 709
Query: 461 LLDLWHEMQESGYPSDGEI 479
+++W E E+G D EI
Sbjct: 710 AMEIWEEALEAGADVDPEI 728
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 183/379 (48%), Gaps = 7/379 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D SYN +V L ++ +L M ++ PD+ T + +MD F + ++ +A ++L
Sbjct: 231 DTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLL 290
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ + ++ + + A + M K + +++TYN ++ G K
Sbjct: 291 EDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKA 350
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ E +L+ +V + +PD +T+S L+ GL + G++DDA + + M E+GC P+ +
Sbjct: 351 GKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTF 410
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I + G DE K + M +C P++ TY+ LI G K+ ++ DA +
Sbjct: 411 NTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL----- 465
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
GI P + +S LE LCS G A + K GC + + Y L++ L +
Sbjct: 466 -GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDE 524
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L + M E G + Y +I GLC ++E+A+ V++ L KG P Y+ L +
Sbjct: 525 ALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLID 584
Query: 521 KLLASNKLESAYNLFRKIK 539
NK+++AY F+ ++
Sbjct: 585 GFCKINKMDAAYQCFKTMR 603
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 177/394 (44%), Gaps = 65/394 (16%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
A V +Y ++ R V+ DM K G++PDL T + ++D +AG++ +A
Sbjct: 298 CAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAH 357
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++L + + D + ++++ LC+ V A L M + N++T+N +I G+
Sbjct: 358 ELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGF 417
Query: 278 SKLGQVVEMERVL---KEIVAE--------------------------GFSPDSLTFSFL 308
K G+V E +VL KE+ G SPD ++S +
Sbjct: 418 CKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSM 477
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
+EGL G++++A EV D M ++GC P ++ Y +I V DE +K + MS C
Sbjct: 478 LEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGC 537
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
EPN+ TY+ LI+GL K+++V DA+ V + ML++G VP T TS ++ C AA
Sbjct: 538 EPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQ 597
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+K R GC+ AY +L I+G C
Sbjct: 598 CFKTMRDSGCEPDKLAYNIL-----------------------------------ISGFC 622
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
G +E A+ VM+ L KG P Y L L
Sbjct: 623 QSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 173/372 (46%), Gaps = 1/372 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y +++ L + + D +L +M ++ +PD + ++ + G++ A +L +
Sbjct: 94 TYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMM 153
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
+ D + ++ CQ + A L MK L + + YN +++G K Q+
Sbjct: 154 LERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQL 213
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E+ ++L+E+V G PD+ +++ ++ L +G+ ++A ++ + M EK CGPD YN++
Sbjct: 214 EEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSL 273
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ + V DE + + M C P + TYT LI G ++ ++ADA V E+M GI
Sbjct: 274 MDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGI 333
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P T L+ LC G A + + + C + Y +L+ L GK
Sbjct: 334 SPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARL 393
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L M E G + + +I G C G+++ V+E P + YS L +
Sbjct: 394 LLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYC 453
Query: 524 ASNKLESAYNLF 535
+N+++ A+ +
Sbjct: 454 KANRMQDAFAIL 465
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 187/445 (42%), Gaps = 69/445 (15%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVL----------------------------- 186
HP+ A YN ++ L + D NVL
Sbjct: 124 HPDAA----VYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALD 179
Query: 187 ------SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVL 240
M + G+ PD + +++ + Q+ + ++L + + G + D S N V+
Sbjct: 180 EARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVV 239
Query: 241 WCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS 299
CLC+ A + M + K +V+TYN ++ G+ K+ ++ E ER+L+++V +
Sbjct: 240 ACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCA 299
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P +T++ LI G RA R+ DA V + M + G PD YN ++ G +E +
Sbjct: 300 PTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHEL 359
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ M +C P++ TY+ L++GL K KV DA + E ML+RG P+ T + ++ C
Sbjct: 360 LEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCK 419
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLL-----------------------------LR 450
G + + ++V C + Y L L
Sbjct: 420 AGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLE 479
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
L GK ++ M + G P Y +I GLC++ + + A+ +++ +G P
Sbjct: 480 GLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEP 539
Query: 511 SRLVYSKLSNKLLASNKLESAYNLF 535
+ YS L N L + ++E A N+
Sbjct: 540 NLYTYSILINGLCKTKRVEDAINVL 564
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 131/274 (47%), Gaps = 4/274 (1%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF-SPDSLTFSFLIEGLGRAGRIDDAIEV 324
+V+T+N ++ + ++G +++R L + + SP + T+ LI GL + RID+A ++
Sbjct: 58 DVITHNTILKAYCQIG---DLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQL 114
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
D M +K C PD YN +I+ +G D K M +C P++ TYT LI G +
Sbjct: 115 LDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQ 174
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+ + +A ++ E+M + G+ P T + L LC + ++ + G + +
Sbjct: 175 TNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFS 234
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y ++ L GK + +M E D Y ++ G C + +++ A ++E+ +
Sbjct: 235 YNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMV 294
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ P+ + Y+ L +++L AY + +
Sbjct: 295 GRRCAPTVITYTTLIGGFSRADRLADAYRVMEDM 328
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 121/273 (44%), Gaps = 8/273 (2%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TY +I+G+S+ G + + E++A FSPD +T + +++ + G +D A+ F
Sbjct: 26 TYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHF--- 82
Query: 329 KEKG---CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+G C P Y +I DE + M +C P+ Y LI+GL K
Sbjct: 83 --RGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKM 140
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
K+ A V + ML+R VP T TS + C A + +K ++ G AY
Sbjct: 141 GKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAY 200
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
LL L + + L EM E+G D Y V+A LC G+ E A ++E+ +
Sbjct: 201 NALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIE 260
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
K P + Y+ L + +K++ A L +
Sbjct: 261 KKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDM 293
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 2/248 (0%)
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
+E ++ P + T+ LI G RAG +E+ + M + PD +N ++ Y +
Sbjct: 13 RERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQI 72
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
GD D + +++G C P TY LI GL + +++ +A ++ +EM+ + P
Sbjct: 73 GDLDRALSHFRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVY 130
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+ LC G AA + K + C + Y L+ L +M+E
Sbjct: 131 NCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKE 190
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
SG D Y ++ GLC QLE ++EE + G P Y+ + L S K E
Sbjct: 191 SGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEE 250
Query: 531 AYNLFRKI 538
A + K+
Sbjct: 251 AGKILEKM 258
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
+P+ TY LI+G ++ LE+ EML R P T + L+ C G A+
Sbjct: 21 KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALS 80
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++ K+ C + Y +L+ L + L EM + D +Y +IAGLC
Sbjct: 81 HFRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLC 138
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+G+++ A V++ L + P + Y+ L +N L+ A L K+K
Sbjct: 139 KMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMK 189
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 179/374 (47%), Gaps = 2/374 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ + +L D A +G PD T +++ + G + +AI +
Sbjct: 322 TYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEA 381
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ GLK + N ++ L Q+ + A L N M + ++ TYN+VI+G K+G V
Sbjct: 382 MEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCV 441
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ + ++ + +A+G PD TF+ LI+G + ++D+AIE+ D M G PD YN++
Sbjct: 442 SDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSI 501
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
++ G +++ M +K M C PN+ TY L K+RKV +AL + EEM ++G+
Sbjct: 502 LNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGL 561
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKA-RKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P + ++ C G A ++K+ + ++ Y +++ +G M
Sbjct: 562 TPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAE 621
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
L+++M E+G+ D Y +I G C G + + + + KG PS + ++ N L
Sbjct: 622 KLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCL 681
Query: 523 LASNKLESAYNLFR 536
++ A +
Sbjct: 682 CLKRRVHEAVGIIH 695
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 180/382 (47%), Gaps = 2/382 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N V+SYN I+ L ++FD V M +G+ PD+ T +I M SF R + + A
Sbjct: 106 NCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAA 165
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISG 276
++L + G + A + V+ + H A LF M G + ++M +N +I
Sbjct: 166 RRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHT 225
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ G V E ER+L +++ G SP+ T + I+G + +++AI + D + +G PD
Sbjct: 226 LCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVG-RGLTPD 284
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN +I E Y + M + EP+ TY +I G K + +A ++
Sbjct: 285 VITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILR 344
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+ +G VP T S + LC G A+ ++ +A + G K +L L++ LS G
Sbjct: 345 DGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQG 404
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
L L +EM E+G D Y VI GLC IG + +A ++ +++ KG P ++
Sbjct: 405 LILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFN 464
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
L + KL++A + ++
Sbjct: 465 TLIDGYCKKLKLDNAIEIVDRM 486
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 179/384 (46%), Gaps = 8/384 (2%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D+ ++N ++ L R+ +L+ + K GV+P+L T++I + F + + +AI
Sbjct: 212 ICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAI 271
Query: 219 QML---GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVI 274
++L GR GL D + N ++ LC+ V A M + + TYN +I
Sbjct: 272 RLLDGVGR----GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSII 327
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ KLG + +++L++ +GF PD T+ LI GL + G ID AI VF+ EKG
Sbjct: 328 DGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLK 387
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ N ++ G + +K MS C P++ TY +I+GL K V+DA +
Sbjct: 388 PNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNL 447
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ + +G +P T + ++ C A+ + + G + Y +L L
Sbjct: 448 VIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCK 507
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK ++ + M E G + Y + C ++E A+ ++EE KG P +
Sbjct: 508 AGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVN 567
Query: 515 YSKLSNKLLASNKLESAYNLFRKI 538
+ L + L+ AY LF+++
Sbjct: 568 FGTLMKGFCDNGDLDGAYQLFKRV 591
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 164/355 (46%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ +M G+ PD+ + ++ + R G V ++ ++L ++ G+ + ++N+ + C
Sbjct: 203 LFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFC 262
Query: 245 QRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
QR + A L + + + +V+TYN +I G K +VVE E L+++V EG+ PD T
Sbjct: 263 QRAMLNEAIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFT 322
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
++ +I+G + G + +A ++ KG PD + Y ++I+ GD D + +
Sbjct: 323 YNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAM 382
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
+PN+ L+ GL + + AL++ EM + G P T + LC G
Sbjct: 383 EKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVS 442
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A + A G + + L+ K +++ M G D Y ++
Sbjct: 443 DADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSIL 502
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
GLC G+ E+ + + + KG P+ + Y+ L+ + K+E A NL +++
Sbjct: 503 NGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQ 557
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 191/411 (46%), Gaps = 22/411 (5%)
Query: 34 LSYNELLSNQKKNMSSLD-EHHVLKELSDLFQIS--SHNSFPNVY-KESRSNSVKRIDSS 89
++YN L+ KN ++ EH++ K +++ ++ ++NS + Y K + +I
Sbjct: 286 ITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRD 345
Query: 90 RAVDEFLLPEERLRGVFLQKLKGKGVIEDAL--WNVNVDLSLD---VVGKVVNRGNLSGE 144
A F +P+E + L G I+ A+ +N ++ L V+ + +G LS +
Sbjct: 346 GAFKGF-VPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKG-LSQQ 403
Query: 145 AMVLFFNWAIKHPN------VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
++L A+K N + D+ +YN+++ L + N++ D +G PD+
Sbjct: 404 GLIL---QALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDV 460
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
T + ++D + + ++ AI+++ R+ + G+ D + N +L LC+ F
Sbjct: 461 FTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKL 520
Query: 259 MKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
M K + N++TYNI+ + K +V E +++E+ +G +PD + F L++G G
Sbjct: 521 MMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGD 580
Query: 318 IDDAIEVFDTMKEKGCGPDTNA-YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
+D A ++F + E+ T A YN +I+ + + + K + M P+ TY
Sbjct: 581 LDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYR 640
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
+I G K+ + +++G++PS T L LC H A+
Sbjct: 641 VMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAV 691
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 7/220 (3%)
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVF-DTMKEKGCGPDTNAYNAVISNYISVGDFD 354
+GF LT+ +IE LG G + EV +T G Y + NY G
Sbjct: 34 DGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGVYIGAMRNYGRKGKIQ 93
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E + ++ M +NCEP++ +Y +++ L++ R A +V+ M D+GIVP T T +
Sbjct: 94 EAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRM 153
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL---DLWHEMQES 471
+ C PHAA + GC+ S AY + + GF + + +L+ EM
Sbjct: 154 KSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTV---IGGFYEENHRVEAHELFEEMLGL 210
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
G D + +I LC G ++ + ++ + L++G P+
Sbjct: 211 GICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPN 250
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 107/238 (44%), Gaps = 7/238 (2%)
Query: 106 FLQKLKGKGVIE--DALWNVNVDLSLDVVGKVVNRGNLSG--EAMVLFFNWAIKHPNVAK 161
+ +KLK IE D +WN V + ++N +G E ++ F ++ V
Sbjct: 470 YCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVP- 528
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
++ +YN++ ++ + + + N++ +M +G+ PD+ +M F G + A Q+
Sbjct: 529 NIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLF 588
Query: 222 GRL-EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSK 279
R+ E + + N+++ +L++ A LFN M + + TY ++I G+ K
Sbjct: 589 KRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCK 648
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
G + L + +G P TF ++ L R+ +A+ + M KG P+
Sbjct: 649 TGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEV 706
>gi|125551971|gb|EAY97680.1| hypothetical protein OsI_19602 [Oryza sativa Indica Group]
Length = 586
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 193/409 (47%), Gaps = 6/409 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHP----NVAKDVKSYNVIVK 171
+E AL ++ LS +V V++R + FF WA A +Y +V
Sbjct: 170 LEAALTALSPPLSETLVLAVLDRFKHAHRPSHRFFRWAAAAAAASGGFAHTTITYCKMVH 229
Query: 172 ALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF 231
LG+ + F M ++ +M KEG ++ I + SF AG++ A+ + + G
Sbjct: 230 ILGKARQFQSMVALIQEMGKEGAL-CMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDD 288
Query: 232 DAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLK 291
ES N +L L Q A+ +F+ M+ + ++ +Y ++ W +VE RV
Sbjct: 289 GVESFNCLLVALAQEGLGREANQVFDRMRDRYAPDLRSYTALMLAWCNARNLVEAGRVWN 348
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
E++ G PD + + +IEGL R R +A+++F+ MK KG P+ Y +I ++ G
Sbjct: 349 EMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRG 408
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
D M+ ++ M C+P++ TYT L+ G ++++ + EEM +G P T
Sbjct: 409 KMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYN 468
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML-LDLWHEMQE 470
+ ++ L + P A +YKK K G + ++ Y ++++ G+ M+ +W EM
Sbjct: 469 ALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHR 528
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
G D Y I G G+ E A +EE ++KG ++ Y+K +
Sbjct: 529 KGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFA 577
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 146/363 (40%), Gaps = 53/363 (14%)
Query: 244 CQRLHVGAASSLFNSM---------KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
C+ +H+ + F SM +G + + + I I ++ G++ V + +
Sbjct: 225 CKMVHILGKARQFQSMVALIQEMGKEGALCMDA--FKIAIKSFAAAGEIKNAVGVFEMMR 282
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
GF +F+ L+ L + G +A +VFD M+++ PD +Y A++ + + +
Sbjct: 283 THGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR-YAPDLRSYTALMLAWCNARNLV 341
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E + + M +P++ + +I GLL+ ++ +A+++FE M +G P+ T T +
Sbjct: 342 EAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLI 401
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
C G AM +++ + VGC+ + Y LL + + L EM + G P
Sbjct: 402 RDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCP 461
Query: 475 SDGEIYEYVIAGLCNIGQLENAV------------------------------------L 498
DG Y +I L N ++A
Sbjct: 462 PDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCA 521
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY----NLFRKIKIARQNDYARRLWR-S 553
V EE RKG CP Y+ N + + E A + +K Q DY + S
Sbjct: 522 VWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFS 581
Query: 554 KGW 556
KGW
Sbjct: 582 KGW 584
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 122/279 (43%), Gaps = 4/279 (1%)
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG-FSPDSLTFSFLIEGLGRAGRID 319
G +TY ++ K Q M +++E+ EG D+ F I+ AG I
Sbjct: 215 GGFAHTTITYCKMVHILGKARQFQSMVALIQEMGKEGALCMDA--FKIAIKSFAAAGEIK 272
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
+A+ VF+ M+ G ++N ++ G E + + M P++ +YT L+
Sbjct: 273 NAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRD-RYAPDLRSYTALM 331
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
+R + +A V+ EML+ G+ P + +E L A+ M++ + G
Sbjct: 332 LAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPA 391
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
++ Y +L+R GK M + + EMQ+ G D Y ++ G N +++ +
Sbjct: 392 PNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTAL 451
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+EE +KG P Y+ L L N + A +++K+
Sbjct: 452 LEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKM 490
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 95/212 (44%), Gaps = 4/212 (1%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
RG EA+ +F K P A +V +Y ++++ +R D +M G PD
Sbjct: 371 RGQRRPEAVKMFELMKAKGP--APNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPD 428
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ T + ++ + A ++ + +L + G D + N ++ L R A+ ++
Sbjct: 429 VATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYK 488
Query: 258 SMKGKVL-FNVMTYNIVISGWSKLGQVVEME-RVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
M K L + TYN+++ + G+ M V +E+ +G PD +++ I G R
Sbjct: 489 KMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRH 548
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
GR ++A + + M +KG YN +++
Sbjct: 549 GRPEEACKYIEEMIQKGMKTPQIDYNKFAADF 580
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 207/435 (47%), Gaps = 3/435 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+ AL + +S +V +V+ + +G + FF WA + S++ +++ALG+
Sbjct: 132 VPAALDALGASVSPQLVAEVLKNLSNAGILALAFFRWAERQQGFVYTADSFHNLIEALGK 191
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
K F + +++ M G+ +T +++ + RA +V +A++ ++ FGLK D
Sbjct: 192 IKQFRLVWSLVEAMRCRGLLSK-DTFRLIVRRYARARKVKEAVETFEKMAGFGLKADLSD 250
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
N ++ L + V A ++F MK G+ + ++ TY +++ GW ++ ++ V +E+
Sbjct: 251 YNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEM 310
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+ G PD + + LI ++G+ D+AI+VF M+ GC P + Y +I+ S
Sbjct: 311 LDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGLGSEERL 370
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
DE +KY++ + + T ++ +S K A ++ +EM GI P++ T
Sbjct: 371 DEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDII 430
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
L L A +++ K GC+ L Y +++ + + L +W++M+E G
Sbjct: 431 LHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKGV 490
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
++ +I GLC +LE A +E L +G P ++S L L+ ++ A
Sbjct: 491 LPCMHMFSALINGLCFENRLEEACAYFQEMLDRGIRPPGQLFSNLKEALIEGGRISLAQE 550
Query: 534 LFRKIKIARQNDYAR 548
+ K+ R+ R
Sbjct: 551 MALKLDELRKTPMRR 565
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 177/383 (46%), Gaps = 5/383 (1%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV +YN I+ AL + + D VL+ M K GV P+ T + ++ + +GQ +
Sbjct: 232 PNVV----TYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKE 287
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVIS 275
AI L ++ G++ D + N ++ LC+ A +F+SM + L + TY ++
Sbjct: 288 AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQ 347
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G++ G +VEM +L +V G P+ FS LI + G++D A+ VF M+++G P
Sbjct: 348 GYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP 407
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
DT Y VI G ++ M+Y++ M P Y LI L K A E+
Sbjct: 408 DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELI 467
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
EMLDRGI T S ++ C G + ++ ++G K ++ Y L+
Sbjct: 468 LEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLA 527
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
GK L M G D Y +I G C I ++E+A+++ E G P + Y
Sbjct: 528 GKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITY 587
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
+ + L + + +A L+ I
Sbjct: 588 NIILQGLFQTRRTAAAKELYVGI 610
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 149/356 (41%), Gaps = 38/356 (10%)
Query: 189 MAKEG---VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
MA+ G V P+L T I++ S AG++ LG + G + DA + +L LC
Sbjct: 79 MARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 138
Query: 246 RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
A M+ VL+ + G P+ ++
Sbjct: 139 DKRTSDA---------------------------------MDIVLRRMTQLGCIPNVFSY 165
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKG--CGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
+ L++GL R +A+E+ M + G C PD +Y VI+ + GD D+ Y M
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM 225
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
PN+ TY +I+ L K++ + A+EV M+ G++P+ T S + CS G P
Sbjct: 226 LDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+ KK G + + Y L+ L G+C ++ M + G + Y +
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ G G L +++ +R G P+ V+S L K++ A +F K++
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 164/369 (44%), Gaps = 13/369 (3%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
++ +Y +++ + M +L M + G++P+ SI++ ++ + G+V +A+ +
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------KGKVLFNVMTYNIVI- 274
++ GL D + V+ LC+ V A F M G +++N + +++ I
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
W K +++ E++ G D++ F+ +I+ + GR+ ++ ++FD M G
Sbjct: 458 DKWDKAKELI------LEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 511
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ Y+ +I Y G DE K M S +P+ TY LI+G K ++ DAL +
Sbjct: 512 PNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F EM G+ P T L+ L AA +Y + G +L L+ Y ++L L
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
L ++ + + + + +I L +G+ + A + G P
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Query: 515 YSKLSNKLL 523
YS ++ L+
Sbjct: 692 YSLMAENLI 700
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 153/337 (45%), Gaps = 5/337 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HPN +++++ A ++ D V S M ++G+NPD T V+ ++G+V
Sbjct: 371 HPNH----YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
A++ ++ D L N ++ LC A L M + + + + +N +I
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
K G+V+E E++ +V G P+ +T+S LI+G AG++D+A ++ +M G
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN +I+ Y + ++ + ++ M S P++ TY ++ GL ++R+ A A E+
Sbjct: 547 PDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ + + G T L LC A+ M++ +L + +++ L
Sbjct: 607 YVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 666
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
G+ DL+ + +G D Y + L G
Sbjct: 667 VGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 703
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 93/199 (46%), Gaps = 1/199 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN ++ + + + +M GV+PD+ T +I++ + + A ++
Sbjct: 548 DCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 607
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
+ + G + + + N++L LC+ A +F ++ + T+NI+I K+
Sbjct: 608 VGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKV 667
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ E + + + A G PD T+S + E L G +++ ++F +M+E GC ++
Sbjct: 668 GRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRML 727
Query: 341 NAVISNYISVGDFDECMKY 359
N+++ + GD Y
Sbjct: 728 NSIVRKLLQRGDITRAGTY 746
>gi|356570295|ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 516
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 184/403 (45%), Gaps = 7/403 (1%)
Query: 112 GKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVK 171
G + L + +VDLS +V +V+ R EA FF WA K P A ++ Y+ ++
Sbjct: 45 GPSQTKQKLEHCSVDLSAKLVVEVLLRTRNDWEAAFTFFLWAGKQPGYAHSIREYHSMIS 104
Query: 172 ALGRRKFFDFMCNVLSDMAKEGVNPDL---ETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
LG+ + FD N++ +M + P L +TL I++ + V +AI + F
Sbjct: 105 ILGKMRKFDTAWNLIEEMRRGRTGPSLVTPQTLLIMIRKYCAVHDVARAINTFYAYKQFN 164
Query: 229 LKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKL-GQVVEME 287
+ E + +L LC+ +V A L K + ++NI+++GW L E
Sbjct: 165 FQVGLEEFHSLLSALCRYKNVQDAEHLLFCNKNLFPLDTKSFNIILNGWCNLIVSTSHAE 224
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
R+ E+ D +++ +I ++ ++ + +FD MK++ PD YNAVI
Sbjct: 225 RIWHEMSKRRIQHDVVSYGSIISCYSKSSKLYKVLRMFDEMKKRKITPDRKVYNAVIYAL 284
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
E + + + PN+ TY LI L K+ KV +A ++F E+L R + P+
Sbjct: 285 AKGRLVKEAVNLIGTLEDNDVTPNVVTYNSLIKPLCKAGKVDEAKQLFYEILKRHLSPTI 344
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T +F L + + K +++GC ++ Y +L+R+ + + + +W
Sbjct: 345 QTFHAFFRILRT---KEEVFELLDKMKELGCYPTIETYIMLMRKFCRWRQLDDVFKMWDA 401
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
M+E G D Y +I GL G+LE A E KGF P
Sbjct: 402 MREDGIGHDRSSYIVLIHGLFLNGKLEEAHTYYAEMQEKGFLP 444
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 194/406 (47%), Gaps = 3/406 (0%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
R N + EA+ L +K D+ +Y ++V L +R D ++L M + + P
Sbjct: 198 RHNRASEAVALVDRMVVK--GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ + ++D+ V A+ + +++ G++ + + N ++ CLC AS L +
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 258 SM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
M + K+ NV+T++ +I + K G++VE E++ E++ PD T+S LI G
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
R+D+A +F+ M K C P+ YN +I + DE M+ ++ MS N TYT
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
LI G ++R+ +A VF++M+ G++P T + L+ LC+ G A+++++ ++
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
+ + Y +++ + GK DL+ + G + Y +++G C G E A
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+ E +G P Y+ L L ++ L R+++ R
Sbjct: 556 DALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 601
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 191/395 (48%), Gaps = 1/395 (0%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+V+ +++ ++ ++ +Y++++ RR VL+ M K G PD+ TL+ ++
Sbjct: 99 LVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLL 158
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VL 264
+ F ++ A+ ++G++ + G + D+ + N ++ L + A +L + M K
Sbjct: 159 NGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ 218
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+++TY IV++G K G + +LK++ P + ++ +I+ L ++DA+ +
Sbjct: 219 PDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNL 278
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F M KG P+ YN++I + G + + + M PN+ T++ LI +K
Sbjct: 279 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
K+ +A ++++EM+ R I P T +S + C + A M++ C ++
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y L++ + ++L+ EM + G + Y +I G + +NA +V ++ +
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G P + YS L + L + K+E+A +F ++
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 181/388 (46%), Gaps = 22/388 (5%)
Query: 115 VIEDALWNV-NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKAL 173
I DAL N NV+ +L++ ++ N+G PNV +YN +++ L
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKG---------------IRPNVV----TYNSLIRCL 301
Query: 174 GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA 233
+ +LSDM + +NP++ T S ++D+F++ G++ +A ++ + + D
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKE 292
+ + ++ C + A +F M K F NV+TYN +I G+ K +V E + +E
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+ G +++T++ LI G +A D+A VF M G PD Y+ ++ + G
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
+ + ++ + EP++ TY +I G+ K+ KV D ++F + +G+ P+ T T+
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
+ C G A ++++ ++ G Y L+R G +L EM+
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 601
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+ D ++ + + G+L+ + L M
Sbjct: 602 FVGDASTIG-LVTNMLHDGRLDKSFLKM 628
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 97/222 (43%)
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
++DDA+ +F M + P ++ ++S + FD + + M + N+ TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
LI+ + +++ AL V +M+ G P T+ S L C A+ + + ++
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G + + L+ L + + L M G D Y V+ GLC G ++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ ++++ + P ++Y+ + + L + A NLF ++
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/166 (18%), Positives = 71/166 (42%)
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y ++ L K+ DA+ +F +M+ PS + L + + + ++ +
Sbjct: 49 YRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 108
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
+G +L Y +L+ + + L + +M + GY D ++ G C+ ++
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+AV ++ + + G+ P ++ L + L N+ A L ++ +
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV 214
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 203/428 (47%), Gaps = 5/428 (1%)
Query: 121 WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFD 180
+ VNV +L++V K R +AM LF + V D +YN +V + K
Sbjct: 108 FGVNV-YNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLA 166
Query: 181 FMCNVLSDMAKEG-VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVV 239
+ M K G P+L T S+++D + ++G+V + + +L +E GLK D + +
Sbjct: 167 EARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSL 226
Query: 240 LWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
+ C + LF+ M + KV NV+TY+ ++ G + G+ E +LK++ A G
Sbjct: 227 ISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGV 286
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
PD + ++ L +GL + GR DAI+V D M +KG P T YN V++ D+
Sbjct: 287 RPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFG 346
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG--IVPSTGTITSFLEP 416
+ M +P+ TY L+ GL + K+ +A+++++ +L + P T + ++
Sbjct: 347 VVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQG 406
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
LC G H A ++ ++G + ++ Y L+ K L LW ESG+ +
Sbjct: 407 LCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPN 466
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
Y +I GLC + L A + + G P+ + Y+ L L + LE A +LF+
Sbjct: 467 SMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQ 526
Query: 537 KIKIARQN 544
+++ N
Sbjct: 527 EMRNVNHN 534
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 171/363 (47%), Gaps = 8/363 (2%)
Query: 181 FMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE---DFGLKFDAESLN 237
F +VLS M K G ++ L++V+ F R+GQ KA+ + +++ D + D + N
Sbjct: 95 FAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVP-DCVTYN 153
Query: 238 VVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
++ C+ + A LF +MK G N++TY+++I + K G+V E +L+E+
Sbjct: 154 TLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMER 213
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
EG D +S LI G I+ E+FD M + P+ Y+ ++ G + E
Sbjct: 214 EGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWRE 273
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+ K M++ P++ YT L GL K+ + DA++V + M+ +G P T T +
Sbjct: 274 ASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVN 333
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
LC A + + K G K Y LL+ L G GK +DLW + +
Sbjct: 334 GLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHV 393
Query: 476 DGEIYEY--VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
+++ +I GLC G++ +A + + G + + Y+ L LA+ KL A
Sbjct: 394 KPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALK 453
Query: 534 LFR 536
L++
Sbjct: 454 LWK 456
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 163/331 (49%), Gaps = 3/331 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YNV+V L + D V+ M K+G PD T + ++ AG++++A+ + L
Sbjct: 327 TYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLL 386
Query: 225 --EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLG 281
E F +K D + N ++ LC+ V A+ + +SM + + N++TYN +I G+
Sbjct: 387 LSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAAR 446
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+++E ++ K V GFSP+S+T+S +I GL + + A +F MK+ G P YN
Sbjct: 447 KLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYN 506
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A++++ ++ ++ M + N ++ ++ +I G LK+ V A E+ EM
Sbjct: 507 ALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMM 566
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
+VP T + + G AM +Y+K G + + LL+ G+ +
Sbjct: 567 DLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKI 626
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+ L H+M + D ++ ++A LC++ +
Sbjct: 627 ISLLHQMADKDVVLDSKLTSTILACLCHMSR 657
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 172/364 (47%), Gaps = 5/364 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+ +V +Y+ +++ LGR + +L DM GV PD+ +++ D + G+ AI
Sbjct: 251 VSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAI 310
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
++L + G + + NVV+ LC+ + A + M KGK + +TYN ++ G
Sbjct: 311 KVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKP-DAVTYNTLLKG 369
Query: 277 WSKLGQVVEMERVLKEIVAEGF--SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G++ E + K +++E F PD T + LI+GL + GR+ DA + +M E G
Sbjct: 370 LCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQ 429
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
+ YN +I Y++ E +K +K PN TY+ +I+GL K + ++ A +
Sbjct: 430 GNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGL 489
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F +M D GI P+ + + LC A ++++ R V + + ++ +++
Sbjct: 490 FCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLK 549
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G +L EM D + +I +G L+ A+ + E+ + G P +V
Sbjct: 550 AGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVV 609
Query: 515 YSKL 518
+ L
Sbjct: 610 FDSL 613
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 136/298 (45%), Gaps = 21/298 (7%)
Query: 85 RIDSSRAVDEFLL-----PEERLRGVFLQKLKGKGVIEDA--LWNVNVDLSLDVVGKVVN 137
R+D + V E ++ P+ L+ L G G I +A LW + + V V
Sbjct: 340 RMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFT 399
Query: 138 RGNL----SGEAMVLFFNWAIKHPNVAK-----DVKSYNVIVKA-LGRRKFFDFMCNVLS 187
NL E V + A H ++ + ++ +YN +++ L RK + + +
Sbjct: 400 CNNLIQGLCKEGRV--HDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEAL-KLWK 456
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
+ G +P+ T S++++ + + A + +++D G++ N ++ LC+
Sbjct: 457 YAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCRED 516
Query: 248 HVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
+ A SLF M+ +V+++NI+I G K G V + +L E+ PD++TFS
Sbjct: 517 SLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFS 576
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
LI + G +D+A+ +++ M G P +++++ Y G+ ++ + M+
Sbjct: 577 ILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMA 634
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 176/355 (49%), Gaps = 1/355 (0%)
Query: 186 LSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
L M K G PDL T + +++ + ++ AI + ++ G K + + ++ CLC+
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 246 RLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
H+ A LFN M NV+TYN +++G ++G+ + +L++++ P+ +T
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
F+ LI+ + G++ +A E+++ M + PD Y ++I+ G DE + + M
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
C PN YT LI G KS++V D +++F EM +G+V +T T T ++ C G P
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A ++ + + Y +LL L GK L ++ M++ + Y +I
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G+C +G++E+A + KG P+ + Y+ + + + A +LF+K+K
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 142/286 (49%), Gaps = 1/286 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V +YN +V L + +L DM K + P++ T + ++D+F++ G++ +A ++
Sbjct: 222 NVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY 281
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
+ + D + ++ LC + A +F M+ + N + Y +I G+ K
Sbjct: 282 NVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+V + ++ E+ +G +++T++ LI+G GR D A EVF+ M + PD Y
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N ++ G ++ + ++ M + N+ TYT +I G+ K KV DA ++F +
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+G+ P+ T T+ + C G H A ++KK ++ G + + YK
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 152/324 (46%), Gaps = 7/324 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V +Y +++ L + + + + + M G P++ T + ++ G+ A +L
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ ++ + + ++ + + A L+N M + V +V TY +I+G
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + E ++ + G P+ + ++ LI G ++ R++D +++F M +KG +T Y
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+I Y VG D + + MSS P++ TY L+ GL + KV AL +FE M
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
R + + T T ++ +C G A ++ G K ++ Y + +SGF + G+
Sbjct: 427 REMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTM---ISGFCRRGL 483
Query: 461 LLD---LWHEMQESGYPSDGEIYE 481
+ + L+ +M+E G+ + +Y+
Sbjct: 484 IHEADSLFKKMKEDGFLPNESVYK 507
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 128/309 (41%), Gaps = 41/309 (13%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI------ 322
T NIV+ Q L +++ GF PD +TF+ L+ G RI+DAI
Sbjct: 120 TCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI 179
Query: 323 -----------------------------EVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
E+F+ M G P+ YNA+++ +G +
Sbjct: 180 LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW 239
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
+ + M EPN+ T+T LI +K K+ +A E++ M+ + P T S
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQE 470
+ LC YG A M+ + GC + Y L+ GF K + D +++EM +
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIH---GFCKSKRVEDGMKIFYEMSQ 356
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G ++ Y +I G C +G+ + A V + + P Y+ L + L + K+E
Sbjct: 357 KGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEK 416
Query: 531 AYNLFRKIK 539
A +F ++
Sbjct: 417 ALMIFEYMR 425
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 96/219 (43%)
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
+ +DA+++F M P + ++S + +D + ++ M P + T
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
++ + S + A +M+ G P T TS L C + A+ ++ + +
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G K ++ Y L+R L ++L+++M +G + Y ++ GLC IG+ +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
++ + +++ P+ + ++ L + + KL A L+
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY 281
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 186/376 (49%), Gaps = 2/376 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ A + + V M + G+ PD T +++M++F +A +V ++ +
Sbjct: 91 AYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEM 150
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
++ + + ++++ +C+ V A +F MK + N+ TY +I G K G V
Sbjct: 151 QNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHV 210
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ + +E+ +EG + ++ LI GLGR+GR D A ++F M KG PD + ++
Sbjct: 211 DKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSL 270
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ G E + ++ C +++ Y LI L KS+++ +A E+F E+ + G+
Sbjct: 271 VYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGL 330
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
VP T + ++ LC G H A ++ ++ GC +T Y L+ L G+
Sbjct: 331 VPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQ 390
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L EMQ GY D Y +I C G++E+A+ + EE KGF + + Y+ + N L
Sbjct: 391 LLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANT-VTYNTILNGLC 449
Query: 524 ASNKLESAYNLFRKIK 539
+ +++ AY LF +K
Sbjct: 450 MAGRVDEAYKLFNGMK 465
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 190/392 (48%), Gaps = 1/392 (0%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FF W V++ +V+ LG + F+ VL+++ K + +
Sbjct: 5 FFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGY 64
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNV 267
AG + K+++ L R+E A + N ++ + + A +++ M + + +
Sbjct: 65 ASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDT 124
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
T+N++++ + K +V + ++ +E+ + SP+ +T+S LI+ + + G ++ A++VF
Sbjct: 125 YTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLD 184
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
MK +GC P+ Y ++I G D+ ++ M+S Y LI GL +S +
Sbjct: 185 MKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGR 244
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
A ++F EML +G+ P T TS + L G A ++++AR VGC L + Y +
Sbjct: 245 ADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNV 304
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L+ L + +++ E++E G D + ++ GLC G++ +A +++ + R G
Sbjct: 305 LIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAG 364
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P VY+ L + L S ++E A L +++
Sbjct: 365 CTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQ 396
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 117/256 (45%), Gaps = 41/256 (16%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS----------------------- 202
YN ++ LGR D + +M +G+ PD T +
Sbjct: 232 YNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEAR 291
Query: 203 ------------IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+++D+ ++ ++ +A ++ G LE+ GL D + N ++ LC+ +
Sbjct: 292 DVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIH 351
Query: 251 AASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A L MK +V YN +I G K G+V E ++L E+ + G+ PD +T++ LI
Sbjct: 352 DAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLI 411
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC- 368
+ + GRI+DA+ +F+ + KG +T YN +++ G DE K + GM
Sbjct: 412 DESCKGGRIEDALRLFEEISAKGFA-NTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVD 470
Query: 369 ---EPNMDTYTRLISG 381
+P+ TYT L++G
Sbjct: 471 GVIDPDFVTYTTLLNG 486
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 106/197 (53%), Gaps = 6/197 (3%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A DV YNV++ L + K D + ++ ++G+ PD+ T + +MD ++G+++ A
Sbjct: 296 ALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFI 355
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWS 278
+LG ++ G D N ++ L + V A L M+ +V+TYN +I
Sbjct: 356 LLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESC 415
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC----G 334
K G++ + R+ +EI A+GF+ +++T++ ++ GL AGR+D+A ++F+ MK++
Sbjct: 416 KGGRIEDALRLFEEISAKGFA-NTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVID 474
Query: 335 PDTNAYNAVISNYISVG 351
PD Y +++ G
Sbjct: 475 PDFVTYTTLLNGARQAG 491
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 4/167 (2%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ + DV ++N ++ L + +L DM + G PD+ + ++D ++G+
Sbjct: 325 LEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGR 384
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
V +A Q+L ++ G + D + N ++ C+ + A LF + K N +TYN +
Sbjct: 385 VEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTVTYNTI 444
Query: 274 ISGWSKLGQVVEMERVL----KEIVAEGFSPDSLTFSFLIEGLGRAG 316
++G G+V E ++ +E V PD +T++ L+ G +AG
Sbjct: 445 LNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAG 491
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 182/374 (48%), Gaps = 1/374 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V+SYN I+ L +F V M G+ PD+ T +I M SF G+ A+++L
Sbjct: 111 VQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLN 170
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLG 281
+ G +F+A S V+ + A LF+ M K + +++T+N +I K G
Sbjct: 171 NMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKG 230
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
V E E++ +++ G P+ TF+ I+GL R G ID+A + +++ +G PD +YN
Sbjct: 231 NVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYN 290
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I + E Y M + EPN TY +I+G K+ + +A ++ + + +
Sbjct: 291 TLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFK 350
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G +P T +S + LC+ G + AM ++ +A + G K S+ Y L++ LS G
Sbjct: 351 GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQA 410
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L L +M E G D Y V+ GLC +G L +A ++ +++ KG P ++ L +
Sbjct: 411 LQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDG 470
Query: 522 LLASNKLESAYNLF 535
++ A +
Sbjct: 471 YCKQRNMDKAIEIL 484
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 169/369 (45%), Gaps = 2/369 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ + +L D +G PD T S +++ G + +A+ +
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382
Query: 225 EDFGLKFDAESLNVVLWCLC-QRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQV 283
+ G K N ++ L Q L + A + + M+ ++ TYN+V++G K+G +
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ +L + +A+G PD TF+ LI+G + +D AIE+ DTM G PD YN +
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTL 502
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
++ D + +K M C PN+ TY LI K RKV++A+E+F+EM RG+
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARK-VGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P T+ + + LCS G A ++ K S + +++ M
Sbjct: 563 TPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAE 622
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
L+H+M S D Y +I C G ++ A + E++ KG PS K+ N L
Sbjct: 623 KLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCL 682
Query: 523 LASNKLESA 531
+++L A
Sbjct: 683 CVTHRLSEA 691
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 178/419 (42%), Gaps = 41/419 (9%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D+ ++N ++ L ++ + S + K GV P+L T +I + R G + +A
Sbjct: 212 ICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAA 271
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++L + GL D S N ++ C+ + A + M V N TYN +I+G+
Sbjct: 272 RLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGF 331
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF------------ 325
K G + +++L++ + +GF PD T+S LI GL G ++ A+ VF
Sbjct: 332 CKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSI 391
Query: 326 -----------------------DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
M E GC PD YN V++ +G +
Sbjct: 392 ILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILND 451
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
+ C P++ T+ LI G K R + A+E+ + ML GI P T + L LC
Sbjct: 452 AIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARK 511
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
+ +K + GC ++ Y +L+ K ++L+ EM+ G D
Sbjct: 512 LDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCT 571
Query: 483 VIAGLCNIGQLENA---VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+I GLC+ G+L+ A + +E+ + F S +++ + N + A LF K+
Sbjct: 572 LICGLCSNGELDKAYELFVTIEKEYK--FSYSTAIFNIMINAFCXKLNVSMAEKLFHKM 628
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 135/360 (37%), Gaps = 79/360 (21%)
Query: 252 ASSLFNSMKGKVLF--NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A +FN +K + F + TY +I G+ ME VL E+ + DS +
Sbjct: 23 ALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRK---NVDSKMLEGVY 79
Query: 310 EGL----GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY----- 360
G+ GR G++ +A+ VF+ M C P +YNA+++ + G F + K Y
Sbjct: 80 IGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKD 139
Query: 361 ------------------------------KGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
M CE N +Y +ISG K +
Sbjct: 140 IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE 199
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A +F+EML +GI P T + LC G + ++ K K G +L + + ++
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259
Query: 451 RL--------------------------------SGFGKCGMLLD---LWHEMQESGYPS 475
L GF K L++ H+M SG
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ Y +I G C G ++NA ++ +++ KGF P YS L N L + A +F
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 114/250 (45%), Gaps = 13/250 (5%)
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN----AYNAVISNYISVG 351
+GF T+ +IE LG G+ + +V M++ D+ Y ++ +Y G
Sbjct: 34 DGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRK---NVDSKMLEGVYIGIMRDYGRKG 90
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
E + ++ M Y+CEP++ +Y +++ L++ + A +V+ M D GI P T T
Sbjct: 91 KVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHT 150
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH---EM 468
++ C G P AA+ + GC+ + +Y ++ SGF K ++ +H EM
Sbjct: 151 IRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVI---SGFYKENCQIEAYHLFDEM 207
Query: 469 QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
+ G D + +I LC G ++ + + + +++G CP+ ++ L +
Sbjct: 208 LKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAI 267
Query: 529 ESAYNLFRKI 538
+ A L I
Sbjct: 268 DEAARLLESI 277
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 182/374 (48%), Gaps = 1/374 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V+SYN I+ L +F V M G+ PD+ T +I M SF G+ A+++L
Sbjct: 111 VQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLN 170
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLG 281
+ G +F+A S V+ + A LF+ M K + +++T+N +I K G
Sbjct: 171 NMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKG 230
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
V E E++ +++ G P+ TF+ I+GL R G ID+A + +++ +G PD +YN
Sbjct: 231 NVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYN 290
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I + E Y M + EPN TY +I+G K+ + +A ++ + + +
Sbjct: 291 TLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFK 350
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G +P T +S + LC+ G + AM ++ +A + G K S+ Y L++ LS G
Sbjct: 351 GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQA 410
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L L +M E G D Y V+ GLC +G L +A ++ +++ KG P ++ L +
Sbjct: 411 LQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDG 470
Query: 522 LLASNKLESAYNLF 535
++ A +
Sbjct: 471 YCKQRNMDKAIEIL 484
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 169/369 (45%), Gaps = 2/369 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ + +L D +G PD T S +++ G + +A+ +
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382
Query: 225 EDFGLKFDAESLNVVLWCLC-QRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQV 283
+ G K N ++ L Q L + A + + M+ ++ TYN+V++G K+G +
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ +L + +A+G PD TF+ LI+G + +D AIE+ DTM G PD YN +
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTL 502
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
++ D + +K M C PN+ TY LI K RKV++A+E+F+EM RG+
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARK-VGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P T+ + + LCS G A ++ K S + +++ M
Sbjct: 563 TPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAE 622
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
L+H+M S D Y +I C G ++ A + E++ KG PS K+ N L
Sbjct: 623 KLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCL 682
Query: 523 LASNKLESA 531
+++L A
Sbjct: 683 CVTHRLSEA 691
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 178/419 (42%), Gaps = 41/419 (9%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D+ ++N ++ L ++ + S + K GV P+L T +I + R G + +A
Sbjct: 212 ICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAA 271
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++L + GL D S N ++ C+ + A + M V N TYN +I+G+
Sbjct: 272 RLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGF 331
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF------------ 325
K G + +++L++ + +GF PD T+S LI GL G ++ A+ VF
Sbjct: 332 CKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSI 391
Query: 326 -----------------------DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
M E GC PD YN V++ +G +
Sbjct: 392 ILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILND 451
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
+ C P++ T+ LI G K R + A+E+ + ML GI P T + L LC
Sbjct: 452 AIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARK 511
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
+ +K + GC ++ Y +L+ K ++L+ EM+ G D
Sbjct: 512 LDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCT 571
Query: 483 VIAGLCNIGQLENA---VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+I GLC+ G+L+ A + +E+ + F S +++ + N + A LF K+
Sbjct: 572 LICGLCSNGELDKAYELFVTIEKEYK--FSYSTAIFNIMINAFCEKLNVSMAEKLFHKM 628
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 135/360 (37%), Gaps = 79/360 (21%)
Query: 252 ASSLFNSMKGKVLF--NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A +FN +K + F + TY +I G+ ME VL E+ + DS +
Sbjct: 23 ALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRK---NVDSKMLEGVY 79
Query: 310 EGL----GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY----- 360
G+ GR G++ +A+ VF+ M C P +YNA+++ + G F + K Y
Sbjct: 80 IGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKD 139
Query: 361 ------------------------------KGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
M CE N +Y +ISG K +
Sbjct: 140 IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE 199
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A +F+EML +GI P T + LC G + ++ K K G +L + + ++
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259
Query: 451 RL--------------------------------SGFGKCGMLLD---LWHEMQESGYPS 475
L GF K L++ H+M SG
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ Y +I G C G ++NA ++ +++ KGF P YS L N L + A +F
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 114/250 (45%), Gaps = 13/250 (5%)
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN----AYNAVISNYISVG 351
+GF T+ +IE LG G+ + +V M++ D+ Y ++ +Y G
Sbjct: 34 DGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRK---NVDSKMLEGVYIGIMRDYGRKG 90
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
E + ++ M Y+CEP++ +Y +++ L++ + A +V+ M D GI P T T
Sbjct: 91 KVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHT 150
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH---EM 468
++ C G P AA+ + GC+ + +Y ++ SGF K ++ +H EM
Sbjct: 151 IRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVI---SGFYKENCQIEAYHLFDEM 207
Query: 469 QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
+ G D + +I LC G ++ + + + +++G CP+ ++ L +
Sbjct: 208 LKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAI 267
Query: 529 ESAYNLFRKI 538
+ A L I
Sbjct: 268 DEAARLLESI 277
>gi|357129397|ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Brachypodium distachyon]
Length = 649
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 199/431 (46%), Gaps = 2/431 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L ++ LS +V V++R + FF WA +Y ++ LG+
Sbjct: 191 LEATLSALSPPLSEALVLAVLDRFKHAHRPSRRFFQWAAASDEFEHTPVTYCKMLHILGK 250
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ F+ M ++ +M K G ++ I + SF AG++ A+ + + G ES
Sbjct: 251 ARQFETMVALVQEMGKAGAL-CMDAFKIAIKSFAAAGEIKNAVGVFEMMRVHGFDDGVES 309
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
N +L L Q A+ +F+ M+ + ++ +Y ++ W +VE RV +++
Sbjct: 310 FNCLLVALAQEGLGKEAARVFDRMRDQYTPDLRSYTALMLAWCNARNLVEAGRVWNDMLE 369
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+G PD + + +I+GL R R +A+++F+ MK KG P+ Y +I ++ G D
Sbjct: 370 KGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKLDM 429
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
M+ ++ M C+P + TYT L+ G ++++ + EEM +G P T + ++
Sbjct: 430 AMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRMDRVTAMLEEMAQKGCPPDGRTYNALIK 489
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR-LSGFGKCGMLLDLWHEMQESGYP 474
L + P A+ +YKK G + ++ Y ++++ G M +W EM G
Sbjct: 490 LLTNRNMPDDAVRIYKKMITKGLEPTIHTYNMMMKSYFLGGRNYAMGCAVWEEMHRKGIC 549
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
D Y I G G+ A +EE ++KG ++ Y+K + + K + Y L
Sbjct: 550 PDVNSYTVFINGHIRHGRPAEACKFLEEMIQKGMKAPQIDYNKFAADFSKAGKPDILYEL 609
Query: 535 FRKIKIARQND 545
+K+K + D
Sbjct: 610 AQKVKFTGKFD 620
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 180/381 (47%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV +Y+ I+ AL + + D VL+ M K GV PD T + ++ + +GQ +AI
Sbjct: 232 ILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI 291
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
L ++ G++ + + + ++ LC+ A +F+SM + L ++ TY ++ G+
Sbjct: 292 GTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGY 351
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G +VEM +L +V G PD F+ LI + ++D A+ VF M++ G P+
Sbjct: 352 ATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNV 411
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y VI G D+ M Y++ M PN+ YT LI GL K A E+ E
Sbjct: 412 VCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILE 471
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
MLDRGI +T S ++ C G + ++ ++G K + Y L+ GK
Sbjct: 472 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGK 531
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L M G D Y +I G C + ++++A+ + +E + G P+ + Y+
Sbjct: 532 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 591
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ L + + +A L+ I
Sbjct: 592 ILQGLFHTRRTAAAKELYVSI 612
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 177/382 (46%), Gaps = 5/382 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V V +Y +++ R D L ++ K+G D T + ++ + A+
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 219 QM-LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK----GKVLFNVMTYNIV 273
+ L R+ + G D S N +L LC A L + M G +V++YN V
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
++G+ K G + E++ G PD +T+S +I L +A +D A+EV +TM + G
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
PD YN+++ Y S G E + K M S EPN+ TY+ L++ L K+ + +A +
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+F+ M RG+ P T + L+ + G + + G + + +L+ +
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYA 387
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
K + ++ +M++ G + Y VI LC G +++A+L E+ + +G P+ +
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447
Query: 514 VYSKLSNKLLASNKLESAYNLF 535
VY+ L + L +K + A L
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELI 469
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 168/375 (44%), Gaps = 1/375 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y +++ + M +L M + G+ PD +I++ ++ + +V +A+ +
Sbjct: 340 DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVF 399
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
++ GL + V+ LC+ V A F M + L N++ Y +I G
Sbjct: 400 SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTC 459
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ + E ++ E++ G +++ F+ +I+ + GR+ ++ ++FD M G PD Y
Sbjct: 460 DKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 519
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I G DE K M S +P++ TY LI+G + ++ DAL +F+EM+
Sbjct: 520 NTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVS 579
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ P+ T L+ L AA +Y K G +L L+ Y ++L L
Sbjct: 580 SGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDE 639
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L ++ + + + + +I L G+++ A + G P YS ++
Sbjct: 640 ALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAE 699
Query: 521 KLLASNKLESAYNLF 535
L+ LE +LF
Sbjct: 700 NLIEQGSLEELDDLF 714
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 156/349 (44%), Gaps = 4/349 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D +N+++ A +++ D V S M + G+NP++ V+D ++G V A+
Sbjct: 372 IQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM 431
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ D GL + ++ LC A L M + + N + +N +I
Sbjct: 432 LYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSH 491
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G+V+E E++ +V G PD +T++ LI+G AG++D+A ++ +M G PD
Sbjct: 492 CKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDI 551
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +I+ Y V D+ + +K M S PN+ TY ++ GL +R+ A A E++
Sbjct: 552 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 611
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ G T L LC A+ M++ +L + +++ L G+
Sbjct: 612 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGR 671
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE---NAVLVMEES 503
DL+ +G D Y + L G LE + L MEE+
Sbjct: 672 MDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEEN 720
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 144/308 (46%), Gaps = 7/308 (2%)
Query: 238 VVLWCLCQ--RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE-MERVLKEIV 294
+++ C C+ RL +G A+ L N +K + +T+ ++ G + + M+ VL+ +
Sbjct: 97 ILIGCCCRAGRLDLGFAA-LGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK---GCGPDTNAYNAVISNYISVG 351
G PD +++ L++GL R +A+E+ M + G PD +YN V++ + G
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
D D+ Y M P++ TY+ +I+ L K++ + A+EV M+ G++P T
Sbjct: 216 DSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 275
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
S L CS G P A+ KK R G + ++ Y L+ L G+ ++ M +
Sbjct: 276 SILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 335
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G D Y ++ G G L +++ +R G P V++ L K++ A
Sbjct: 336 GLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQA 395
Query: 532 YNLFRKIK 539
+F K++
Sbjct: 396 MLVFSKMR 403
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 159/361 (44%), Gaps = 14/361 (3%)
Query: 189 MAKEG---VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
MA+ G V P + T +I++ RAG++ LG + G + DA + +L LC
Sbjct: 80 MARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCA 139
Query: 246 RLHVGAASSLF--NSMKGKVLFNVMTYNIVISGW---SKLGQVVEMERVLKEIVAEGFSP 300
A + + + +V +YN ++ G ++ + +E+ ++ + G P
Sbjct: 140 DKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPP 199
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
D ++++ ++ G + G D A + M ++G PD Y+++I+ D+ M+
Sbjct: 200 DVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVL 259
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
M P+ TY ++ G S + +A+ ++M G+ P+ T +S + LC
Sbjct: 260 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKN 319
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDG 477
G A ++ K G + + Y+ LL+ G+ G L++ L M +G D
Sbjct: 320 GRSTEARKIFDSMTKRGLEPDIATYRTLLQ---GYATKGALVEMHALLDLMVRNGIQPDH 376
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
++ +I +++ A+LV + + G P+ + Y + + L S ++ A F +
Sbjct: 377 HVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQ 436
Query: 538 I 538
+
Sbjct: 437 M 437
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 151/354 (42%), Gaps = 3/354 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+AM++F ++ + +V Y ++ L + D M EG+ P++ +
Sbjct: 394 QAMLVF--SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTS 451
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
++ + KA +++ + D G+ + N ++ C+ V + LF+ M +
Sbjct: 452 LIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 511
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
V +++TYN +I G G++ E ++L +V+ G PD +T+ LI G R R+DDA+
Sbjct: 512 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 571
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+F M G P+ YN ++ + Y ++ + + TY ++ GL
Sbjct: 572 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 631
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K+ +AL +F+ + + T T + L G A ++ G +
Sbjct: 632 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDV 691
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
Y L+ L G L DL+ M+E+G +D + ++ L G + A
Sbjct: 692 RTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 1/202 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D+ +Y ++ R D + +M GV+P++ T +I++ + A
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGW 277
++ + G + + + N++L LC+ A +F ++ + T+NI+I
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 666
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G++ E + + A G PD T+S + E L G +++ ++F +M+E GC D+
Sbjct: 667 LKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADS 726
Query: 338 NAYNAVISNYISVGDFDECMKY 359
N+++ + GD Y
Sbjct: 727 RMLNSIVRKLLQRGDITRAGTY 748
>gi|255547888|ref|XP_002515001.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546052|gb|EEF47555.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 466
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 211/435 (48%), Gaps = 10/435 (2%)
Query: 113 KGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKA 172
+ ++ D + N ++ LS ++V K++ R ++ + F WA ++Y+ +V
Sbjct: 36 QSLVHDEVCN-SIHLSHELVDKLLFRFKDDWKSALGVFRWAESRAGYKHSPEAYDTMVDI 94
Query: 173 LGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
+G+ K D M +L +M K G + L+T+ M F A Q +++ +L FGL+ +
Sbjct: 95 MGKMKQMDQMEFLLEEMEK-GQHVTLKTVGKAMRRFAGARQWENVLRVFDKLGTFGLEKN 153
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
ES+N++L LC+ V A +F +K + N T+NI I GW K+ +V E ++E
Sbjct: 154 TESMNLLLDTLCKERKVELAREIFLDLKSHISPNANTFNIFIHGWCKVNRVEEAYWTIQE 213
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+ G +P +++S +++ E+ D M+ +G P+ Y +V+S +
Sbjct: 214 MKGHGCTPCVISYSTIVQFYCHRSNFSKVYELLDEMEAQGLIPNVVTYTSVMSALAKSEE 273
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE-EMLDRGIVPSTGTIT 411
++E ++ + M S C+P+ Y LI L K+ + +A++VFE EM + G+ P+T T
Sbjct: 274 YEEALQIAQRMKSVGCKPDTLFYNSLIHTLGKAGRPEEAIQVFEVEMPNTGVPPNTSTYN 333
Query: 412 SFLEPLCSYGPPHAAMMMYKKAR-KVGCKLSLTAYKLLLRRLSGFGKCGMLL-DLWHEMQ 469
S + LC + A+ + K+ + CK + Y LL+ G LL L +M
Sbjct: 334 SMIAMLCHHSQERKALNLLKEIEASIICKPDVQTYYPLLKSCFKAGSIDSLLSQLLDDMV 393
Query: 470 ESGYPS-DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
+ + S D Y ++ GLC + E A + EE + K P + LL KL
Sbjct: 394 KKHHLSLDFSAYTLLVHGLCRANKCEWAYCLFEEMIGKDMTPKY----QTCRLLLDEVKL 449
Query: 529 ESAYNLFRKIKIARQ 543
+ Y+ +KI+I Q
Sbjct: 450 KHMYDAAQKIEIVMQ 464
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 181/379 (47%), Gaps = 1/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V YN I+ L ++ D VL +M G++PD+ T SI++ F + G V K + ++
Sbjct: 324 NVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLI 383
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++ ++ S + + LC++ + +F + ++ Y+I+I G+
Sbjct: 384 EEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQ 443
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + ++++E+V +PD F L+ G + G +A+E F+ M E G P
Sbjct: 444 GDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATC 503
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I + G +E + M + PN+ TY +I+ L K RK ALE+F ML
Sbjct: 504 NVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLK 563
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
R ++PS ++ ++ A+M+Y + K+G + AY +L+ L +
Sbjct: 564 RNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCE 623
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+L+ +M E+G D Y VIAG C IG + A + E L++G P+ + Y+ L +
Sbjct: 624 AYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVD 683
Query: 521 KLLASNKLESAYNLFRKIK 539
N+++ A L ++K
Sbjct: 684 GYCKMNRIDIADMLIDEMK 702
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 191/454 (42%), Gaps = 44/454 (9%)
Query: 127 LSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVL 186
+ D++ KV ++ A+ +F K + +S N ++K L +F+ ++
Sbjct: 180 IVFDLLIKVFAANSMLENAVDVFLQA--KKTGLELSTRSCNFLLKCLAEANRREFLRSLF 237
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRAG------QVYKAIQMLGRLEDFGLKFDAESLNVVL 240
+M G P++ T +I+M+ + + +A ++L +E G + + +
Sbjct: 238 EEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYI 297
Query: 241 WCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS 299
+ LC+ +V +A S+ L NV YN +I G K G++ E +VL+E+ + G S
Sbjct: 298 YGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGIS 357
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP------------------------ 335
PD T+S LI G + G ++ + + + MK P
Sbjct: 358 PDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDI 417
Query: 336 -----------DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
D AY+ +I + GD D K + M N P+ + L+ G K
Sbjct: 418 FRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCK 477
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+ALE F ML+ GI+PS T ++ C G A+ + + + G +L
Sbjct: 478 MGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFT 537
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y ++ RL K L+L+ M + +Y +I G + A+++ L
Sbjct: 538 YNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARML 597
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ G P + Y+ L N L +++ AYNLF+K+
Sbjct: 598 KIGVTPDMVAYTILINILCHRSRMCEAYNLFKKM 631
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 169/384 (44%), Gaps = 2/384 (0%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
L+ +K+ N+ + SY+ + L +++ D ++ D+ G D SI++
Sbjct: 380 LYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKG 439
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFN 266
F G + A +++ + L D + ++ C+ A FN M +G +L +
Sbjct: 440 FCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPS 499
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
+ T N++I + G+V E ++ E+ +G P+ T++ +I L + + + A+E+F
Sbjct: 500 IATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFP 559
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M ++ P Y+ +I + + + + Y M P+M YT LI+ L
Sbjct: 560 LMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRS 619
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
++ +A +F++M + G+ P + TS + C G A ++ + + G ++ Y
Sbjct: 620 RMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYT 679
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+ + + L EM+ G D Y +IA G L+ A+ ++ E
Sbjct: 680 SLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKEN 739
Query: 507 GFCPSRLVYSKLSNKLLASNKLES 530
G P + Y L LL + KL++
Sbjct: 740 GVLPDHMTYMMLE-WLLKAKKLKT 762
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 175/419 (41%), Gaps = 21/419 (5%)
Query: 128 SLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLS 187
S+D VVN L+G M ++ + +D+ Y V L + F +
Sbjct: 123 SIDAFRTVVNVLALAGMHMEVY--------ALLRDIVCYYNKVN-LDAFELFPILLESPK 173
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
D A+ + DL ++ F + A+ + + + GL+ S N +L CL +
Sbjct: 174 DAARSVIVFDL-----LIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEAN 228
Query: 248 HVGAASSLFNSMKGK-VLFNVMTYNIVISGWSK--LGQ----VVEMERVLKEIVAEGFSP 300
SLF MK NV TY I+++ + K G+ + +L+E+ G SP
Sbjct: 229 RREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESP 288
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
+T+S I GL R G ++ A++ ++ + YNA+I G+ DE +K
Sbjct: 289 TVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVL 348
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
+ M S P++ TY+ LI G K V L + EEM + PS + +S LC
Sbjct: 349 EEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKK 408
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
++ +++ G K TAY +L++ G L EM + D +
Sbjct: 409 RLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNF 468
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
E ++ G C +G NA+ L G PS + + + ++E A NL +++
Sbjct: 469 ESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQ 527
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 102/245 (41%), Gaps = 6/245 (2%)
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+ F LI+ +++A++VF K+ G T + N ++ + ++
Sbjct: 180 IVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEE 239
Query: 363 MSSYNCEPNMDTYTRLISGLLKSR------KVADALEVFEEMLDRGIVPSTGTITSFLEP 416
M S PN+ TYT +++ K A E+ EEM G P+ T ++++
Sbjct: 240 MKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYG 299
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
LC G +A+ + +++ Y ++ L G+ L + EM+ G D
Sbjct: 300 LCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPD 359
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
Y +I G C G +E + ++EE PS + YS L + L + + ++FR
Sbjct: 360 VYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFR 419
Query: 537 KIKIA 541
+ A
Sbjct: 420 DLGAA 424
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 23/224 (10%)
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
I+ TMK+ G +A+ V++ G E + + Y + N+D + L
Sbjct: 109 IKFSTTMKKYGFSRSIDAFRTVVNVLALAGMHMEVYALLRDIVCYYNKVNLDAF-ELFPI 167
Query: 382 LLKSRK-VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
LL+S K A ++ VF+ ++ S LE A+ ++ +A+K G +L
Sbjct: 168 LLESPKDAARSVIVFDLLI------KVFAANSMLE---------NAVDVFLQAKKTGLEL 212
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC--NIGQLE---- 494
S + LL+ L+ + L L+ EM+ +G P + Y ++ C N G+ +
Sbjct: 213 STRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTR 272
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
A ++EE R G P+ + YS L +ESA + R +
Sbjct: 273 QATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSL 316
>gi|224110770|ref|XP_002315631.1| predicted protein [Populus trichocarpa]
gi|222864671|gb|EEF01802.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 200/419 (47%), Gaps = 8/419 (1%)
Query: 124 NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMC 183
N+++S D+V K++ R ++ + F WA P ++Y+++V LG+ K D M
Sbjct: 35 NIEVSNDLVDKLLLRFKDDWKSALGVFRWAGLRPGYKHRPEAYDMMVDILGKMKQMDQMR 94
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
+L +M + + L T+ M F AG+ A++M L FGL+ +AES+N++L L
Sbjct: 95 ELLEEMNRNHL-VTLNTVGKAMRRFSGAGKWEDAVRMFDELGTFGLEKNAESMNLLLDTL 153
Query: 244 CQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
C+ V A ++F +K +L N T+NI I GW K V E L+E+ F P +
Sbjct: 154 CKEGKVEQARAIFLELKSHILPNAHTFNIFIHGWCKANLVDEAHWTLQEMKGHAFRPCVI 213
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
++S +I R E+ D M+ +GC P+ Y +I + +E ++ + M
Sbjct: 214 SYSTIILFYCRQHNFSKVYELLDEMEAQGCPPNVVTYTTIIVFLAKSQNTEEALQLTQRM 273
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFE-EMLDRGIVPSTGTITSFLEPLCSYGP 422
S C+P+ + LI L ++ + +A++VFE EM + G+ T T S + LC +G
Sbjct: 274 KSAGCKPDTPFFNSLIYILGRAGRFQEAVDVFEKEMPNAGVSRDTSTYNSMIAMLCHHGH 333
Query: 423 PHAAMMMYKKARKVGC-KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS-DGEIY 480
A+ + ++ KL + LL+ G +L L +M + S D Y
Sbjct: 334 VSKALSLLREMETSAPFKLDGQTFYPLLKSCLRTGDMNLLSQLLDDMVKKHQLSLDRSAY 393
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I GLC + + A + EE + K P + + LL KL+S Y+ KI+
Sbjct: 394 ALLIHGLCRANKCQWAYHLFEEMISKDIVPK----YQTCHMLLEEVKLKSMYDTAEKIE 448
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 204/435 (46%), Gaps = 15/435 (3%)
Query: 106 FLQKLKGKGVIEDAL-WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
L+ L+G G + D + +NV ++ G ++ VL +V+ DV
Sbjct: 159 ILEVLEGSGAVPDVITYNV-------MISGYCKAGEINNALSVL------DRMSVSPDVV 205
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+++L VL M + PD+ T +I++++ R V +A+++L +
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEM 265
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
D G D + NV++ +C+ + A N M NV+T+NI++ G+
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
++ E++L +++ +GFSP +TF+ LI L R G + AI++ + M + GC P++ +YN +
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPL 385
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ + D ++Y + M S C P++ TY +++ L K KV DA+E+ ++ +G
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P T + ++ L G A+ + + R K Y L+ LS GK +
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+HE + G + + ++ GLC Q + A+ + + +G P+ Y+ L L
Sbjct: 506 FFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLA 565
Query: 524 ASNKLESAYNLFRKI 538
+ A L ++
Sbjct: 566 YEGMAKEALELLNEL 580
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 181/381 (47%), Gaps = 3/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V +DV+S N + + L R + L +M G PD+ + ++ F R G+ KA
Sbjct: 99 VLEDVESNNHL-RQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAA 157
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
++L LE G D + NV++ C+ + A S+ + M V +V+TYN ++
Sbjct: 158 KILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS--VSPDVVTYNTILRSLC 215
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
G++ + VL ++ PD +T++ LIE R + A+++ D M+++GC PD
Sbjct: 216 DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVV 275
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
YN +++ G DE +K+ M S C+PN+ T+ ++ + + + DA ++ +M
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
L +G PS T + LC G A+ + +K K GC+ + +Y LL K
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKM 395
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
++ M G D Y ++ LC G++E+AV ++ + KG P + Y+ +
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 455
Query: 519 SNKLLASNKLESAYNLFRKIK 539
+ L + K A L +++
Sbjct: 456 IDGLAKAGKTGKAIKLLDEMR 476
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 182/423 (43%), Gaps = 40/423 (9%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F + H NV D+ +++ R +L + G PD+ T ++++ +
Sbjct: 124 FLENMVYHGNVP-DIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGY 182
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NV 267
+AG++ A+ +L R+ + D + N +L LC + A + + M + + +V
Sbjct: 183 CKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 239
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TY I+I + V + ++L E+ G +PD +T++ L+ G+ + GR+D+AI+ +
Sbjct: 240 ITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND 299
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDE---------------------------CMKYY 360
M GC P+ +N ++ + S G + + C K
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGL 359
Query: 361 KG--------MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
G M + C+PN +Y L+ G K +K+ A+E E M+ RG P T +
Sbjct: 360 LGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
L LC G A+ + + GC L Y ++ L+ GK G + L EM+
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
D Y ++ GL G+++ A+ E R G P+ + ++ + L + + + A
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAI 539
Query: 533 NLF 535
+
Sbjct: 540 DFL 542
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 125/243 (51%), Gaps = 1/243 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V ++N+++ L R+ ++L M K G P+ + + ++ F + ++ +AI+ L
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM-TYNIVISGWSKLG 281
R+ G D + N +L LC+ V A + N + K V+ TYN VI G +K G
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ + ++L E+ A+ PD++T+S L+ GL R G++D+AI+ F + G P+ +N
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFN 523
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+++ D + + M + C+P +YT LI GL +ALE+ E+ ++
Sbjct: 524 SIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNK 583
Query: 402 GIV 404
G++
Sbjct: 584 GLM 586
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 180/381 (47%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV +Y+ I+ AL + + D VL+ M K GV PD T + ++ + +GQ +AI
Sbjct: 232 ILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI 291
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
L ++ G++ + + + ++ LC+ A +F+SM + L ++ TY ++ G+
Sbjct: 292 GTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGY 351
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G +VEM +L +V G PD F+ LI + ++D A+ VF M++ G P+
Sbjct: 352 ATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNV 411
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y VI G D+ M Y++ M PN+ YT LI GL K A E+ E
Sbjct: 412 VCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILE 471
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
MLDRGI +T S ++ C G + ++ ++G K + Y L+ GK
Sbjct: 472 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGK 531
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L M G D Y +I G C + ++++A+ + +E + G P+ + Y+
Sbjct: 532 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 591
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ L + + +A L+ I
Sbjct: 592 ILQGLFHTRRTAAAKELYVSI 612
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 177/382 (46%), Gaps = 5/382 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V V +Y +++ R D L ++ K+G D T + ++ + A+
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 219 QM-LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK----GKVLFNVMTYNIV 273
+ L R+ + G D S N +L LC A L + M G +V++YN V
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
++G+ K G + E++ G PD +T+S +I L +A +D A+EV +TM + G
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
PD YN+++ Y S G E + K M S EPN+ TY+ L++ L K+ + +A +
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+F+ M RG+ P T + L+ + G + + G + + +L+ +
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYA 387
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
K + ++ +M++ G + Y VI LC G +++A+L E+ + +G P+ +
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447
Query: 514 VYSKLSNKLLASNKLESAYNLF 535
VY+ L + L +K + A L
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELI 469
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 168/375 (44%), Gaps = 1/375 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y +++ + M +L M + G+ PD +I++ ++ + +V +A+ +
Sbjct: 340 DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVF 399
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
++ GL + V+ LC+ V A F M + L N++ Y +I G
Sbjct: 400 SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTC 459
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ + E ++ E++ G +++ F+ +I+ + GR+ ++ ++FD M G PD Y
Sbjct: 460 DKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 519
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I G DE K M S +P++ TY LI+G + ++ DAL +F+EM+
Sbjct: 520 NTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVS 579
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ P+ T L+ L AA +Y K G +L L+ Y ++L L
Sbjct: 580 SGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDE 639
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L ++ + + + + +I L G+++ A + G P YS ++
Sbjct: 640 ALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAE 699
Query: 521 KLLASNKLESAYNLF 535
L+ LE +LF
Sbjct: 700 NLIEQGSLEELDDLF 714
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 156/349 (44%), Gaps = 4/349 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D +N+++ A +++ D V S M + G+NP++ V+D ++G V A+
Sbjct: 372 IQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM 431
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ D GL + ++ LC A L M + + N + +N +I
Sbjct: 432 LYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSH 491
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G+V+E E++ +V G PD +T++ LI+G AG++D+A ++ +M G PD
Sbjct: 492 CKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDI 551
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +I+ Y V D+ + +K M S PN+ TY ++ GL +R+ A A E++
Sbjct: 552 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 611
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ G T L LC A+ M++ +L + +++ L G+
Sbjct: 612 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGR 671
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE---NAVLVMEES 503
DL+ +G D Y + L G LE + L MEE+
Sbjct: 672 MDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEEN 720
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 144/308 (46%), Gaps = 7/308 (2%)
Query: 238 VVLWCLCQ--RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE-MERVLKEIV 294
+++ C C+ RL +G A+ L N +K + +T+ ++ G + + M+ VL+ +
Sbjct: 97 ILIGCCCRAGRLDLGFAA-LGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK---GCGPDTNAYNAVISNYISVG 351
G PD +++ L++GL R +A+E+ M + G PD +YN V++ + G
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
D D+ Y M P++ TY+ +I+ L K++ + A+EV M+ G++P T
Sbjct: 216 DSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 275
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
S L CS G P A+ KK R G + ++ Y L+ L G+ ++ M +
Sbjct: 276 SILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 335
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G D Y ++ G G L +++ +R G P V++ L K++ A
Sbjct: 336 GLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQA 395
Query: 532 YNLFRKIK 539
+F K++
Sbjct: 396 MLVFSKMR 403
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 159/361 (44%), Gaps = 14/361 (3%)
Query: 189 MAKEG---VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
MA+ G V P + T +I++ RAG++ LG + G + DA + +L LC
Sbjct: 80 MARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCA 139
Query: 246 RLHVGAASSLF--NSMKGKVLFNVMTYNIVISGW---SKLGQVVEMERVLKEIVAEGFSP 300
A + + + +V +YN ++ G ++ + +E+ ++ + G P
Sbjct: 140 DKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPP 199
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
D ++++ ++ G + G D A + M ++G PD Y+++I+ D+ M+
Sbjct: 200 DVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVL 259
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
M P+ TY ++ G S + +A+ ++M G+ P+ T +S + LC
Sbjct: 260 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKN 319
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDG 477
G A ++ K G + + Y+ LL+ G+ G L++ L M +G D
Sbjct: 320 GRSTEARKIFDSMTKRGLEPDIATYRTLLQ---GYATKGALVEMHALLDLMVRNGIQPDH 376
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
++ +I +++ A+LV + + G P+ + Y + + L S ++ A F +
Sbjct: 377 HVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQ 436
Query: 538 I 538
+
Sbjct: 437 M 437
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 1/202 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D+ +Y ++ R D + +M GV+P++ T +I++ + A
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGW 277
++ + G + + + N++L LC+ A +F ++ + T+NI+I
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 666
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G++ E + + A G PD T+S + E L G +++ ++F +M+E GC D+
Sbjct: 667 LKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADS 726
Query: 338 NAYNAVISNYISVGDFDECMKY 359
N+++ + GD Y
Sbjct: 727 RMLNSIVRKLLQRGDITRAGTY 748
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 176/381 (46%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +V +Y+ I+ AL + + D VL+ M K GV P+ T + ++ + +GQ +AI
Sbjct: 230 ILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAI 289
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
L ++ G++ D + N ++ LC+ A +F+SM + L + TY ++ G+
Sbjct: 290 GFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGY 349
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G +VEM +L +V G P+ FS LI + G++D A+ VF M+++G PDT
Sbjct: 350 ATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDT 409
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y VI G ++ M+Y++ M P Y LI L K A E+ E
Sbjct: 410 VTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILE 469
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
MLDRGI T S ++ C G + ++ ++G K + Y L+ GK
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 529
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L M G D Y +I G C I ++E+A+++ E G P + Y+
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ L + + +A L+ I
Sbjct: 590 ILQGLFQTRRTAAAKELYVGI 610
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 164/369 (44%), Gaps = 13/369 (3%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
++ +Y +++ + M +L M + G++P+ SI++ ++ + G+V +A+ +
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------KGKVLFNVMTYNIVI- 274
++ GL D + V+ LC+ V A F M G +++N + +++ I
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
W K +++ E++ G D++ F+ +I+ + GR+ ++ ++FD M G
Sbjct: 458 DKWDKAKELI------LEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 511
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD Y+ +I Y G DE K M S +P+ TY LI+G K ++ DAL +
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F EM G+ P T L+ L AA +Y + G +L L+ Y ++L L
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
L ++ + + + + +I L +G+ + A + G P
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Query: 515 YSKLSNKLL 523
YS ++ L+
Sbjct: 692 YSLMAENLI 700
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 150/356 (42%), Gaps = 38/356 (10%)
Query: 189 MAKEG---VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
MA+ G V P+L T I++ S AG++ LG + G + DA + +L LC
Sbjct: 79 MARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 138
Query: 246 RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
A M+ VL+ + G P+ ++
Sbjct: 139 DKRTSDA---------------------------------MDIVLRRMTQLGCIPNVFSY 165
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKG--CGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
+ L++GL R +A+E+ M + G C PD +Y VI+ + GD D+ Y M
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM 225
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
PN+ TY+ +I+ L K++ + A+EV M+ G++P+ T S + CS G P
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+ KK G + + Y L+ L G+C ++ M + G + Y +
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ G G L +++ +R G P+ V+S L K++ A +F K++
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 153/337 (45%), Gaps = 5/337 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HPN +++++ A ++ D V S M ++G+NPD T V+ ++G+V
Sbjct: 371 HPNH----YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
A++ ++ D L N ++ LC A L M + + + + +N +I
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
K G+V+E E++ +V G PD +T+S LI+G AG++D+A ++ +M G
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN +I+ Y + ++ + ++ M S P++ TY ++ GL ++R+ A A E+
Sbjct: 547 PDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ + + G T L LC A+ M++ +L + +++ L
Sbjct: 607 YVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 666
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
G+ DL+ + +G D Y + L G
Sbjct: 667 VGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 703
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 93/199 (46%), Gaps = 1/199 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN ++ + + + +M GV+PD+ T +I++ + + A ++
Sbjct: 548 DCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 607
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
+ + G + + + N++L LC+ A +F ++ + T+NI+I K+
Sbjct: 608 VGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKV 667
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ E + + + A G PD T+S + E L G +++ ++F +M+E GC ++
Sbjct: 668 GRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRML 727
Query: 341 NAVISNYISVGDFDECMKY 359
N+++ + GD Y
Sbjct: 728 NSIVRKLLQRGDITRAGTY 746
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 197/435 (45%), Gaps = 51/435 (11%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K + DV +YN ++ + R++ + + M K P++ T SI++D ++G+
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGK 211
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
A+QM + + + + +++ LCQ A LF +MK + + +TYN
Sbjct: 212 TQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNA 271
Query: 273 VISGWSKLGQVVEMERVLK-----------------------------------EIVAEG 297
++ G+ KLG+V E +LK ++
Sbjct: 272 LLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHN 331
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
PD + ++ +++GL +AG+ DA+ + + M E+G PDT+ YNA+I Y +G DE
Sbjct: 332 IKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAK 391
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+ +S +C + TYT LI G+ +S V DA ++F EM G PS T + ++
Sbjct: 392 SLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGF 451
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSL--------------TAYKLLLRRLSGFGKCGMLLD 463
C G A +++ K ++G SL + + ++ +L G +
Sbjct: 452 CKAGNIEKAQLLFYKM-EIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYN 510
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ ++ +SG+ + Y +I G C G + A + +E KG P + Y L N LL
Sbjct: 511 ILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLL 570
Query: 524 ASNKLESAYNLFRKI 538
++N+ E A+ + +I
Sbjct: 571 SANREEDAFTVLDQI 585
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 202/420 (48%), Gaps = 41/420 (9%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FF WA K + V S+N+I+ L + F+ VL ++ + G + + ++++ ++
Sbjct: 78 FFIWASKFRRLRSWV-SHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAY 136
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNV 267
+ + KA++ ++DF K D + N VL + ++ V A ++N M K L N+
Sbjct: 137 AKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNI 196
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
T++I+I G K G+ ++ E+ P+ +T++ +I GL +A + D A +F
Sbjct: 197 ATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIA 256
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDEC---MKY------------------------- 359
MK+ GC PD+ YNA++ + +G DE +KY
Sbjct: 257 MKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARR 316
Query: 360 -------YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
Y+ M+ +N +P++ YT ++ GL K+ K DAL + EM +RG+VP T +
Sbjct: 317 FEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNA 376
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
++ C G A ++ + K C S Y +L+ + G G +++EM++ G
Sbjct: 377 LIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHG 436
Query: 473 -YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR-LVYSKLSNKLLASNKLES 530
YPS + +I G C G +E A L+ + + G PS L S+ +N++L + L++
Sbjct: 437 CYPS-VVTFNALIDGFCKAGNIEKAQLLFYK-MEIGRNPSLFLRLSQGANRVLDTASLQT 494
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 114/251 (45%)
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
+VLKEI GFS + F+ LI+ + I+ A+E F+ MK+ C PD YN V+
Sbjct: 112 QVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVM 171
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
+ + Y M NC PN+ T++ LI G+ KS K +AL++F+EM R I+P+
Sbjct: 172 VRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNK 231
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T T + LC A ++ + GC Y LL G+ L L
Sbjct: 232 ITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKY 291
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
++ Y D + Y +I GL + E+A + + P ++Y+ + L + K
Sbjct: 292 FEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGK 351
Query: 528 LESAYNLFRKI 538
+ A L ++
Sbjct: 352 FKDALRLLNEM 362
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 146/351 (41%), Gaps = 17/351 (4%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D + Y+ ++ L R + F+ M + + PD+ +I+M +AG+ A+++L
Sbjct: 300 DKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLL 359
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ + GL D N ++ C + A SL + K + TY I+I G +
Sbjct: 360 NEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRS 419
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP----- 335
G V + +++ E+ G P +TF+ LI+G +AG I+ A +F M E G P
Sbjct: 420 GLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKM-EIGRNPSLFLR 478
Query: 336 ---------DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
DT + ++ G + ++ PN+ TY LI G K+
Sbjct: 479 LSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAG 538
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+ A ++F+E+ +G+ P + T + + L S A + + K GC YK
Sbjct: 539 NINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYK 598
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
+ K + LW + S D E+ + V G++E AV
Sbjct: 599 SFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEENF-EKGEVEEAV 648
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 152/368 (41%), Gaps = 53/368 (14%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML--- 221
+Y +++ + R + ++M K G P + T + ++D F +AG + KA Q+L
Sbjct: 408 TYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKA-QLLFYK 466
Query: 222 ---GRLEDFGLKF--------DAESLNVVLWCLCQR-LHVGAASSLFNSMKGKVLFNVMT 269
GR L+ D SL ++ LC L + A + L N++T
Sbjct: 467 MEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIIT 526
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
YNI+I G+ K G + ++ KE+ +G SPDS+T+ LI GL A R +DA V D +
Sbjct: 527 YNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQIL 586
Query: 330 EKGCGPDTNAYNAVIS-----NYISVGDFDECMKYYKGMSSYNCEP-------------- 370
+ GC P T Y + ++ N I++ F +KY + + + E
Sbjct: 587 KNGCTPITEVYKSFMTWSCRRNKITLA-FSLWLKYLRSIPGRDSEVLKSVEENFEKGEVE 645
Query: 371 ----------------NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ YT + GL ++ ++ +AL++F + + ++ + + +
Sbjct: 646 EAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLI 705
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKL-SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
L G A ++ G L +LL L K DL M+ GY
Sbjct: 706 YRLLKVGNLDLAAEIFLYTIDKGYMLMPRICNRLLKSLLRSEDKRNRAFDLLSRMKSLGY 765
Query: 474 PSDGEIYE 481
D +++
Sbjct: 766 DLDSHLHQ 773
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 79/198 (39%)
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
++N +I I F+ + K + + D +T LI K + A+E FE M
Sbjct: 93 SHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMM 152
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
D P T + L + A+ +Y + K+ C ++ + +L+ + GK
Sbjct: 153 KDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKT 212
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
L ++ EM + + Y +I+GLC + + A + G P + Y+ L
Sbjct: 213 QNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNAL 272
Query: 519 SNKLLASNKLESAYNLFR 536
+ +++ A L +
Sbjct: 273 LHGFCKLGRVDEALGLLK 290
>gi|2827705|emb|CAA16678.1| predicted protein [Arabidopsis thaliana]
Length = 598
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 196/423 (46%), Gaps = 35/423 (8%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E AL V+L ++ +V+NR +G FF WA K P ++ Y +VK L +
Sbjct: 93 LELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSK 152
Query: 176 RKFFDFMCNVLSDMAKEGVNPDL---ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
+ F + ++ +M KE NP L E +++ F A V KAI++L + FG + D
Sbjct: 153 MRQFGAVWGLIEEMRKE--NPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPD 210
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
+L LC+ V A+ LF M+ +V G+++E + VL +
Sbjct: 211 EYVFGCLLDALCKHGSVKDAAKLFEDMRMRV-----------------GKMMEAKYVLVQ 253
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+ GF PD + ++ L+ G AG++ DA ++ M+ +G P+ N Y +I V
Sbjct: 254 MNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDR 313
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
+E MK + M Y CE ++ TYT L+SG K K+ V ++M+ +G++PS T
Sbjct: 314 MEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMH 373
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
+ + + +K R++ + Y +++R G+ + LW+EM+E+G
Sbjct: 374 IMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG 433
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
+ + +I GL + G L A +E L L N +L KLE A
Sbjct: 434 LSPGVDTFVIMINGLASQGCLLEASDHFKEML-------------LLNTVLKDKKLEMAK 480
Query: 533 NLF 535
+++
Sbjct: 481 DVW 483
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 146/379 (38%), Gaps = 67/379 (17%)
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWC------------LCQRLHVGAASSLF 256
+R G + + + G + G +F + +C L + GA L
Sbjct: 104 LRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLI 163
Query: 257 NSMKGK--VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
M+ + L + +++ ++ V + VL E+ GF PD F L++ L +
Sbjct: 164 EEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCK 223
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G + DA ++F+ M+ + VG E M+ EP++
Sbjct: 224 HGSVKDAAKLFEDMR------------------MRVGKMMEAKYVLVQMNEAGFEPDIVD 265
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
YT L+SG + K+ADA ++ +M RG P+ T ++ LC AM ++ +
Sbjct: 266 YTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEME 325
Query: 435 KVGCKLSLTAYKLLLRRLSGFG---KCGMLLD------------------LWHEMQES-- 471
+ C+ + Y L+ +G KC ++LD + HE +ES
Sbjct: 326 RYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFE 385
Query: 472 ------------GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
Y D IY VI C +G+++ AV + E G P + +
Sbjct: 386 ECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMI 445
Query: 520 NKLLASNKLESAYNLFRKI 538
N L + L A + F+++
Sbjct: 446 NGLASQGCLLEASDHFKEM 464
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 132/326 (40%), Gaps = 60/326 (18%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
VL M + G PD+ + ++ + AG++ A +L + G + +A V++ LC
Sbjct: 250 VLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALC 309
Query: 245 QRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ + A +F M + + +V+TY ++SG+ K G++ + VL +++ +G P L
Sbjct: 310 KVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSEL 369
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T+ ++ + ++ +E+ + M++ PD YN VI +G+ E ++ + M
Sbjct: 370 TYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEM 429
Query: 364 SSYNCEPNMDTYTRLISGL----------------------LKSRKVADALEVFE----- 396
P +DT+ +I+GL LK +K+ A +V+
Sbjct: 430 EENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMLLLNTVLKDKKLEMAKDVWSCITSK 489
Query: 397 -------------------------------EMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
EM++ +P T ++ L
Sbjct: 490 GACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREF 549
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRR 451
A + +K R + + ++ +K+ RR
Sbjct: 550 AGEITEKVRNMAAEREMS-FKMYKRR 574
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 217/467 (46%), Gaps = 28/467 (5%)
Query: 88 SSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGK------------V 135
S+RA + E+LR FL ++ EDAL DL L++V +
Sbjct: 25 SARAYSGY---REKLRTGFLHSIR----FEDAL-----DLFLEMVQSQPLPSVVDFTRLL 72
Query: 136 VNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
NL V++F+ ++ ++ D+ S+ +++ R ++L M K G +
Sbjct: 73 TAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYD 132
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P + T ++ F +++ A ++ + G + + N ++ CLC+ V A L
Sbjct: 133 PSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALEL 192
Query: 256 FNSM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
N M KG++ +++TYN +++G G+ + R+L+++ +PD TF+ LI+
Sbjct: 193 LNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFV 252
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+ G +D+A E++ M + GP+T YN++I+ G K + M+S C PN+
Sbjct: 253 KQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVV 312
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
TY LI+G KSR+V D +++F+ M G+V T T + + C G A ++
Sbjct: 313 TYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWM 372
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI-YEYVIAGLCNIGQ 492
G + + +LL L G+ G + +++M+ SG G + Y +I GLC +
Sbjct: 373 VSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMR-SGEKYLGIVAYNIMIHGLCKADK 431
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+E A + +G P Y+ + L + A LFR++K
Sbjct: 432 VEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMK 478
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 187/395 (47%), Gaps = 1/395 (0%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+V++ +++ ++ D+ S+ +++ R F +L M K G P + TL ++
Sbjct: 633 IVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLL 692
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VL 264
+ F + + +A+ ++ + + GL+ + N V+ LC+ + A +F M+ K ++
Sbjct: 693 NGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIV 752
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+ +TYN +ISG G+ + R+L+++V P+ + F+ LI+ + G + +A +
Sbjct: 753 ADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNL 812
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
+ M + P+ YN++I+ + G + + M S C P++ TY LI+G K
Sbjct: 813 YKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCK 872
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
S++V D +++F EM +G+V T + + C G + A ++ + G +
Sbjct: 873 SKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVT 932
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y +LL L GK L + ++Q++ D Y +I G+C +++ A +
Sbjct: 933 YNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLT 992
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
RKG + Y + + L + A L ++K
Sbjct: 993 RKGVKLDAIAYITMISGLCRNGLRREADKLCTRMK 1027
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 174/377 (46%), Gaps = 1/377 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ + ++ A+ + FD + + M G++ DL + +I++ F R + A+ +LG
Sbjct: 615 IVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLG 674
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLG 281
++ G + +L +L CQ A SL +SM L NV+ YN VI+G K
Sbjct: 675 KMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNR 734
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ + + +G D++T++ LI GL +GR DA + M ++ P+ +
Sbjct: 735 DLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFT 794
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A+I ++ G+ E YK M + PN+ TY LI+G ++ DA +F+ M+ +
Sbjct: 795 ALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSK 854
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G P T + + C M ++ + G Y L+ GK +
Sbjct: 855 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVA 914
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+++ M + G P D Y ++ LCN G++E A++++E+ + + Y+ +
Sbjct: 915 QKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQG 974
Query: 522 LLASNKLESAYNLFRKI 538
+ ++K++ A+ LFR +
Sbjct: 975 MCRNDKVKEAWCLFRSL 991
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 138/284 (48%), Gaps = 1/284 (0%)
Query: 155 KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV 214
K +A D+ +YN ++ L + +L DM K +NPD+ T + ++D+F++ G +
Sbjct: 198 KKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNL 257
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIV 273
+A ++ ++ + + + N ++ LC + A F+ M K F NV+TYN +
Sbjct: 258 DEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTL 317
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
I+G+ K +V + ++ + + EG D+ T++ LI G + G++ A ++F M G
Sbjct: 318 INGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGV 377
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
PD + ++ G+ M + M S + Y +I GL K+ KV +A E
Sbjct: 378 TPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWE 437
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
+F + G+ P T T + LC GP A ++++ ++ G
Sbjct: 438 LFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDG 481
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 145/300 (48%), Gaps = 1/300 (0%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
+ ++ + D +YN ++ L + +L DM K ++P++ + ++D+F++
Sbjct: 744 YGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 803
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTY 270
G + +A + + + + + N ++ C + +G A +F+ M K F +V+TY
Sbjct: 804 GNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTY 863
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
N +I+G+ K +V + ++ E+ +G D+ T++ LI G +AG+++ A +VF+ M +
Sbjct: 864 NTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 923
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
G PD YN ++ + G ++ + + + + ++ TY +I G+ ++ KV +
Sbjct: 924 CGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKE 983
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A +F + +G+ + + LC G A + + ++ G S Y LR
Sbjct: 984 AWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLR 1043
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/451 (19%), Positives = 189/451 (41%), Gaps = 38/451 (8%)
Query: 121 WNVNVDLSLDVVGKVVNRGNLS-----GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
W V+ ++ D++ + L G AMV F + ++ + +YN+++ L +
Sbjct: 371 WMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFND--MRSGEKYLGIVAYNIMIHGLCK 428
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE- 234
+ + + EGV PD T +I++ + G +A ++ R+++ G+ AE
Sbjct: 429 ADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAED 488
Query: 235 ------------SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQ 282
SL ++ C +R + + L+ L++ + I I+ S +
Sbjct: 489 GHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSSVKG 548
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFL---------------IEGLGRAGRIDDAIEVFDT 327
V +L E G +P+S +FS + + DDA +F
Sbjct: 549 FVRRHLLLLE---RGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCE 605
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M + P + V++ + FD + + M + ++ ++T LI + +
Sbjct: 606 MLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSR 665
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ AL + +M+ G PS T+ S L C A+ + ++G + ++ Y
Sbjct: 666 FSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNT 725
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
++ L L++++ M++ G +D Y +I+GLCN G+ +A ++ + +++
Sbjct: 726 VINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRK 785
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ + ++ L + + L A NL++++
Sbjct: 786 IDPNVIFFTALIDTFVKEGNLLEAKNLYKEM 816
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 95/189 (50%), Gaps = 1/189 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN ++ + K + + +M +G+ D T + ++ + +AG++ A ++
Sbjct: 859 DVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 918
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
R+ D G+ D + N++L CLC + A + + K ++ +++TYNI+I G +
Sbjct: 919 NRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRN 978
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+V E + + + +G D++ + +I GL R G +A ++ MKE G P Y
Sbjct: 979 DKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIY 1038
Query: 341 NAVISNYIS 349
+ + ++ +
Sbjct: 1039 DETLRDHYT 1047
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 196/421 (46%), Gaps = 5/421 (1%)
Query: 113 KGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKA 172
K +E L + +S ++V +V+ R G FF WA + P+ A ++SY+++V+
Sbjct: 52 KDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILVEI 111
Query: 173 LGRRKFFDFMCNVLSDMAKEGVNPDL--ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLK 230
LG K F + + L + A+E ++ + IV ++ RA +A + R+ +FG+K
Sbjct: 112 LGSSKQFALLWDFLIE-AREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIK 170
Query: 231 FDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERV 289
+ L+ +L LC + HV A F KG ++ + TY+I++ GW+++ +V
Sbjct: 171 PCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKV 230
Query: 290 LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYIS 349
E++ D L ++ L++ L ++G +D ++F M G PD ++ I Y
Sbjct: 231 FDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCD 290
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
GD K M Y+ PN+ T+ +I L K+ KV DA + +EM+ +G P T T
Sbjct: 291 AGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWT 350
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
S + C + + A + + + C Y ++L+ L G+ ++W M
Sbjct: 351 YNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMS 410
Query: 470 ESGYPSDGEIYEYVIAGLC-NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
E + Y +I GL G+LE A E + +G P L N+L+ ++
Sbjct: 411 ERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQM 470
Query: 529 E 529
+
Sbjct: 471 D 471
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 103/264 (39%)
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
IV +S+ E R +V G P L+ L ++ A E F K
Sbjct: 143 IVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGF 202
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G P Y+ ++ + + D K + M NC ++ Y L+ L KS V
Sbjct: 203 GIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGG 262
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
++F+EM + G+ P + F+ C G H+A + + ++ ++ + +++
Sbjct: 263 YKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKT 322
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L K L EM + G D Y ++A C+ ++ A ++ R P
Sbjct: 323 LCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPD 382
Query: 512 RLVYSKLSNKLLASNKLESAYNLF 535
R Y+ + L+ + + A ++
Sbjct: 383 RHTYNMVLKLLIRIGRFDRATEIW 406
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 59/151 (39%)
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
++A F M++ GI P + L LC + A + KA+ G S Y +L
Sbjct: 155 SEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSIL 214
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+R + ++ EM E D Y ++ LC G ++ + +E G
Sbjct: 215 VRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGL 274
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P ++ + + + SAY + ++K
Sbjct: 275 KPDAYSFAIFIHAYCDAGDVHSAYKVLDRMK 305
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 176/383 (45%), Gaps = 5/383 (1%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV +Y+ I+ AL + + D VL+ M K GV P+ T + ++ + +GQ +
Sbjct: 232 PNVV----TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKE 287
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVIS 275
AI L ++ G++ D + N ++ LC+ A +F+SM + L + TY ++
Sbjct: 288 AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQ 347
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G++ G +VEM +L +V G P+ FS LI + G++D A+ VF M+++G P
Sbjct: 348 GYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP 407
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
DT Y VI G ++ M+Y++ M P Y LI L K A E+
Sbjct: 408 DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELI 467
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
EMLDRGI T S ++ C G + ++ ++G K + Y L+
Sbjct: 468 LEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLA 527
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
GK L M G D Y +I G C I ++E+A+++ E G P + Y
Sbjct: 528 GKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITY 587
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
+ + L + + +A L+ I
Sbjct: 588 NIILQGLFQTRRTAAAKELYVGI 610
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 164/369 (44%), Gaps = 13/369 (3%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
++ +Y +++ + M +L M + G++P+ SI++ ++ + G+V +A+ +
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------KGKVLFNVMTYNIVI- 274
++ GL D + V+ LC+ V A F M G +++N + +++ I
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
W K +++ E++ G D++ F+ +I+ + GR+ ++ ++FD M G
Sbjct: 458 DKWDKAKELI------LEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 511
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD Y+ +I Y G DE K M S +P+ TY LI+G K ++ DAL +
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F EM G+ P T L+ L AA +Y + G +L L+ Y ++L L
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
L ++ + + + + +I L +G+ + A + G P
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Query: 515 YSKLSNKLL 523
YS ++ L+
Sbjct: 692 YSLMAENLI 700
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 150/356 (42%), Gaps = 38/356 (10%)
Query: 189 MAKEG---VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
MA+ G V P+L T I++ S AG++ LG + G + DA + +L LC
Sbjct: 79 MARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 138
Query: 246 RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
A M+ VL+ + G P+ ++
Sbjct: 139 DKRTSDA---------------------------------MDIVLRRMTQLGCIPNVFSY 165
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKG--CGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
+ L++GL R +A+E+ M + G C PD +Y VI+ + GD D+ Y M
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM 225
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
PN+ TY+ +I+ L K++ + A+EV M+ G++P+ T S + CS G P
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+ KK G + + Y L+ L G+C ++ M + G + Y +
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ G G L +++ +R G P+ V+S L K++ A +F K++
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 153/337 (45%), Gaps = 5/337 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HPN +++++ A ++ D V S M ++G+NPD T V+ ++G+V
Sbjct: 371 HPNH----YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
A++ ++ D L N ++ LC A L M + + + + +N +I
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
K G+V+E E++ +V G PD +T+S LI+G AG++D+A ++ +M G
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN +I+ Y + ++ + ++ M S P++ TY ++ GL ++R+ A A E+
Sbjct: 547 PDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ + + G T L LC A+ M++ +L + +++ L
Sbjct: 607 YVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 666
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
G+ DL+ + +G D Y + L G
Sbjct: 667 VGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 703
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 93/199 (46%), Gaps = 1/199 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN ++ + + + +M GV+PD+ T +I++ + + A ++
Sbjct: 548 DCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 607
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
+ + G + + + N++L LC+ A +F ++ + T+NI+I K+
Sbjct: 608 VGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKV 667
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ E + + + A G PD T+S + E L G +++ ++F +M+E GC ++
Sbjct: 668 GRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRML 727
Query: 341 NAVISNYISVGDFDECMKY 359
N+++ + GD Y
Sbjct: 728 NSIVRKLLQRGDITRAGTY 746
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 181/381 (47%), Gaps = 3/381 (0%)
Query: 162 DVKSY--NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
+V +Y N++V + + F + V+S+M K V PD+ T ++++D+ RAG V A+
Sbjct: 156 EVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMA 215
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWS 278
++ + G+K + N VL L + A +F +M V +V ++N++I G+
Sbjct: 216 LIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFC 275
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
+ G++ E R KE+ +PD ++FS LI R G +D A E M+E G PD
Sbjct: 276 RAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGV 335
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
Y VI + G E ++ M ++ C P++ TY L++GL K R+++DA E+ EM
Sbjct: 336 IYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEM 395
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+RG+ P T T+ + C G A+ + + + Y L+ + G
Sbjct: 396 KERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDL 455
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
G +LW +M + Y +I C GQ++NA ++E + KG P+ + Y+ +
Sbjct: 456 GKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSI 515
Query: 519 SNKLLASNKLESAYNLFRKIK 539
S + K++
Sbjct: 516 IKGYCRSGNVSKGQQFLPKMR 536
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 169/377 (44%), Gaps = 1/377 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
VA DV+S+N+++ R + +M V PD+ + S ++ F R G++ A
Sbjct: 260 VAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAA 319
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGW 277
+ L + +FGL D +V+ C+ + A + + M L +V+TYN +++G
Sbjct: 320 EYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGL 379
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K ++ + E +L E+ G PD TF+ LI G R G I+ A++ FDT+ ++ PD
Sbjct: 380 CKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDI 439
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I GD + + + M S PN TY+ LI + +V +A +E
Sbjct: 440 VTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDE 499
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+++GIVP+ T S ++ C G K R L Y L+ GK
Sbjct: 500 MVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGK 559
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+L M+ D Y +I+G G ++ A V ++ +G P R Y
Sbjct: 560 MHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMS 619
Query: 518 LSNKLLASNKLESAYNL 534
+ N + + + ++ L
Sbjct: 620 MINGHVVAGNSKKSFQL 636
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 163/367 (44%), Gaps = 7/367 (1%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
L F ++ V DV S++ ++ RR D L +M + G+ PD ++V+
Sbjct: 284 LRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGG 343
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFN 266
F RAG + +A+++ + FG D + N +L LC+ + A L N MK + V +
Sbjct: 344 FCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPD 403
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
+ T+ +I G+ + G + + + I + PD +T++ LI+G+ R G + A E++D
Sbjct: 404 LCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWD 463
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M + P+ Y+ +I ++ G D + M + PN+ TY +I G +S
Sbjct: 464 DMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSG 523
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
V+ + +M ++P T + + G H A + K + Y
Sbjct: 524 NVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYN 583
Query: 447 LLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
++ +SGF G + + ++ +M G D Y +I G G + + + +E
Sbjct: 584 MI---ISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEM 640
Query: 504 LRKGFCP 510
L+KG P
Sbjct: 641 LQKGLAP 647
>gi|357480939|ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512090|gb|AES93713.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 128/514 (24%), Positives = 225/514 (43%), Gaps = 17/514 (3%)
Query: 15 SSLSSSFSLFSFSTSVRSNLSYNEL----LSNQKKNMSSLDEHHVLKELSDLFQISSHNS 70
S++S F + F T V ++ EL + + K S+ D+ V+ L+ S +
Sbjct: 68 SNVSPHFFINPFCTVVVNSPESPELPPWVMFSDKPTPSNSDDDFVIPSLAHWVDSSILQT 127
Query: 71 FPNVYKESRSNSVKRIDSSRAVDEFLLPEERL--RGVFLQKLKGKGVIEDALWNVNVDLS 128
P ++ + ++ + FL E+R +Q L G G +S
Sbjct: 128 KPKLFAKPSLEESIHLEDVEKISTFL-KEQRHSSHDHVVQALDGSGF----------RVS 176
Query: 129 LDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSD 188
+V +V+ R A FF WA K + YN++V LG+ K FD M ++ +
Sbjct: 177 NSLVMQVLKRFGNDWVAAYGFFIWAKKQTPYVHSPEVYNLMVDILGKAKEFDLMWKLVKE 236
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + L+T+S VM F +A + A++ + +G++ D +LN +L L +
Sbjct: 237 MKRIEGYVCLDTMSKVMRRFAKAQRHEDAVEAFRGMGKYGVEKDTAALNKLLDALVKGQS 296
Query: 249 VGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
+ A ++ + K V + ++NI+I+GW K+ + +V++E GF PD T++
Sbjct: 297 IEIAHNVLDEFKSSVPLSSPSFNILINGWCKVRNFEKARKVMEERKEHGFEPDVFTYNNF 356
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
IE EV + M+ GC P+ Y ++ Y G + ++ Y+ M
Sbjct: 357 IESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLLGYGKAGQLSKALEEYERMKKDGI 416
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P+ Y+ L+ L K+ ++ DA EVF++M +G+V T + + C++ A+
Sbjct: 417 VPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYNTMISTACAHSKEETALR 476
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ K+ + CK L Y LL+ + +L L M + D Y ++ L
Sbjct: 477 LLKEMEETSCKPDLQTYHPLLKMCCKKKRMKVLKFLLDHMFKHDLCPDRGTYTLLVQSLS 536
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
N G+L A EE + KGF P L+ KL
Sbjct: 537 NSGKLVEACTFFEEMVSKGFTPMETTVKLLTRKL 570
>gi|356560073|ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 192/418 (45%), Gaps = 15/418 (3%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E AL + + LS +V V++R + + FF WA + + + +YN ++ L
Sbjct: 10 MEKALGQLGIPLSTPLVTGVLHRLRYDEKIALRFFTWAGHQEDYSHEPCAYNDMMDILSS 69
Query: 176 RKF----FDFMCNVLSDMAKEG-VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLK 230
++ F +C+VL M + +E L +++ + + +Q R +K
Sbjct: 70 TRYKVKQFRIVCDVLEYMKRNNKTTVPVEVLLVILRKYTE--KYLTHVQKFARKRRIRVK 127
Query: 231 FDAE--SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMER 288
E + N++L LC+ V A +L+ M+ V N TYNI + GW ++ +
Sbjct: 128 TQPEINAFNLLLDALCKCCLVEDAETLYKKMRKTVKPNAETYNIFVFGWCRVRNPTRGMK 187
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG---PDTNAYNAVIS 345
+L+E+V G PD+ ++ I+ +AG + +A+++F+ M+ KG P Y +I
Sbjct: 188 LLEEMVELGHRPDNFAYNTAIDTYCKAGMVTEAVDLFEFMRTKGSSISSPTAKTYAIIIV 247
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+EC K M S C P++ TY +I G+ K+ +A + EEM ++ P
Sbjct: 248 ALAQHDRMEECFKLIGHMISSGCLPDVTTYKEIIEGMCVCGKIDEAYKFLEEMGNKSYRP 307
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
T FL+ LC A+ +Y + ++ C S+ Y +L+ + W
Sbjct: 308 DIVTYNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEIDDPDGAFETW 367
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
EM G D + Y +I GL N ++E+A ++EE + KG +L Y K + L+
Sbjct: 368 QEMDNRGCRPDIDTYSVMIDGLFNCNKVEDACFLLEEVINKGI---KLPYKKFDSFLM 422
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 133/282 (47%), Gaps = 4/282 (1%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
V + ++YN+ V R + +L +M + G PD + +D++ +AG V +A
Sbjct: 161 TVKPNAETYNIFVFGWCRVRNPTRGMKLLEEMVELGHRPDNFAYNTAIDTYCKAGMVTEA 220
Query: 218 IQMLGRLEDFGLKFD---AESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIV 273
+ + + G A++ +++ L Q + L M L +V TY +
Sbjct: 221 VDLFEFMRTKGSSISSPTAKTYAIIIVALAQHDRMEECFKLIGHMISSGCLPDVTTYKEI 280
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
I G G++ E + L+E+ + + PD +T++ ++ L + +DA++++ M E C
Sbjct: 281 IEGMCVCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSEDALKLYGRMIELNC 340
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
P YN +IS + + D D + ++ M + C P++DTY+ +I GL KV DA
Sbjct: 341 IPSVQTYNMLISMFFEIDDPDGAFETWQEMDNRGCRPDIDTYSVMIDGLFNCNKVEDACF 400
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
+ EE++++GI SFL L G A + + RK
Sbjct: 401 LLEEVINKGIKLPYKKFDSFLMQLSVIGDLQAIHRVSEHMRK 442
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 97/218 (44%), Gaps = 2/218 (0%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDV-KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNP 196
+ + EA+ LF K +++ K+Y +I+ AL + + ++ M G P
Sbjct: 213 KAGMVTEAVDLFEFMRTKGSSISSPTAKTYAIIIVALAQHDRMEECFKLIGHMISSGCLP 272
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
D+ T +++ G++ +A + L + + + D + N L LC A L+
Sbjct: 273 DVTTYKEIIEGMCVCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSEDALKLY 332
Query: 257 NSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
M + + +V TYN++IS + ++ +E+ G PD T+S +I+GL
Sbjct: 333 GRMIELNCIPSVQTYNMLISMFFEIDDPDGAFETWQEMDNRGCRPDIDTYSVMIDGLFNC 392
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+++DA + + + KG +++ + +GD
Sbjct: 393 NKVEDACFLLEEVINKGIKLPYKKFDSFLMQLSVIGDL 430
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 181/387 (46%), Gaps = 2/387 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ +V +YN I+ AL + + D VL+ M K GV PD T + ++ F +GQ +AI
Sbjct: 119 ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAI 178
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
L ++ G++ D + N ++ LC+ A +F+SM + L + TY ++ G+
Sbjct: 179 VFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGY 238
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G +VEM +L +V G P+ FS L+ + ++++A+ VF M+++G P+
Sbjct: 239 ATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNA 298
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y AVI G ++ M Y++ M P Y LI GL K A E+ E
Sbjct: 299 VTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 358
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
MLDRGI +T S ++ C G + ++ ++G K + Y L+ GK
Sbjct: 359 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 418
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L M G D Y +I G C I ++++A+++ E G P + Y+
Sbjct: 419 MDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNI 478
Query: 518 LSNKLLASNKLESAYNLFRKI-KIARQ 543
+ L + + +A L+ I K RQ
Sbjct: 479 ILQGLFQTRRTAAAKELYVGITKSGRQ 505
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 149/307 (48%), Gaps = 3/307 (0%)
Query: 232 DAESLNVVLWCLCQRLHVGAASSLFNSMK---GKVLFNVMTYNIVISGWSKLGQVVEMER 288
D S N++L LC A L + M G +V++Y+ VI+G+ K G + +
Sbjct: 50 DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYS 109
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
E++ + SP+ +T++ +I L +A +D A+EV TM + G PD YN+++ +
Sbjct: 110 TYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 169
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTG 408
S G E + + K M S EP++ TY L+ L K+ + +A ++F+ M RG+ P
Sbjct: 170 SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEIT 229
Query: 409 TITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM 468
T + L+ + G + + G + + +L+ + K + ++ +M
Sbjct: 230 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 289
Query: 469 QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
++ G + Y VI LC G++E+A+L E+ + +G P +VY+ L + L NK
Sbjct: 290 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 349
Query: 529 ESAYNLF 535
E A L
Sbjct: 350 ERAEELI 356
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 3/254 (1%)
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG--CGPDTNAYNAVIS 345
V E++ G PD +++ L+ GL R +A+E+ M + G C PD +Y+ VI+
Sbjct: 38 HVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVIN 96
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+ GD D+ Y M PN+ TY +I+ L K++ V A+EV M+ G++P
Sbjct: 97 GFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMP 156
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
T S + CS G P A++ KK R G + + Y L+ L G+C ++
Sbjct: 157 DCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIF 216
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
M + G + Y ++ G G L +++ +R G P+ V+S L
Sbjct: 217 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQ 276
Query: 526 NKLESAYNLFRKIK 539
K+E A +F K++
Sbjct: 277 EKVEEAMLVFSKMR 290
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 154/340 (45%), Gaps = 5/340 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HPN ++++V A +++ + V S M ++G+NP+ T V+ ++G+V
Sbjct: 260 HPNHY----VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 315
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
A+ ++ D GL N ++ LC A L M + + N + +N +I
Sbjct: 316 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 375
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
K G+V+E E++ +V G PD +T+S LI+G AG++D+A ++ +M G
Sbjct: 376 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 435
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD Y+ +I+ Y + + + ++ M S P++ TY ++ GL ++R+ A A E+
Sbjct: 436 PDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 495
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ + G T L LC A+ M++ + KL + +++ L
Sbjct: 496 YVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLK 555
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G+ DL+ +G + Y + + G LE
Sbjct: 556 VGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 595
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 178/435 (40%), Gaps = 52/435 (11%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKAL---GR----RKFFDFMCNVLSDMAKEGVNP 196
EA+V F ++ V DV +YN ++ L GR RK FD M K G+ P
Sbjct: 176 EAIV--FLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD-------SMTKRGLKP 226
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
++ T ++ + G + + +L + G+ + ++++ ++ V A +F
Sbjct: 227 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVF 286
Query: 257 NSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL--- 312
+ M+ + L N +TY VI K G+V + ++++ EG SP ++ ++ LI GL
Sbjct: 287 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 346
Query: 313 --------------------------------GRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ GR+ ++ ++FD M G PD Y
Sbjct: 347 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 406
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +I Y G DE K M S +P+ TY+ LI+G K ++ DAL +F EM
Sbjct: 407 STLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMES 466
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ P T L+ L AA +Y K G +L L+ Y ++L L
Sbjct: 467 SGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDD 526
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L ++ + + + +I L +G+ + A + G P+ Y ++
Sbjct: 527 ALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 586
Query: 521 KLLASNKLESAYNLF 535
++ LE LF
Sbjct: 587 NIIGQGLLEELDQLF 601
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 80/173 (46%), Gaps = 1/173 (0%)
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
+M GV+PD+ T +I++ + + A ++ + G + + + N++L LC+
Sbjct: 463 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNK 522
Query: 248 HVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
A +F ++ L T+NI+I K+G+ E + + + G P+ T+
Sbjct: 523 LTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYR 582
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
+ E + G +++ ++F +M++ GC D+ N ++ + G+ Y
Sbjct: 583 LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTY 635
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 84/189 (44%), Gaps = 3/189 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+VLF ++ V+ D+ +YN+I++ L + + + + K G +L T +I
Sbjct: 456 DALVLF--REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNI 513
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++ + A++M L LK +A + N+++ L + A LF +
Sbjct: 514 ILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 573
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
L N TY ++ G + E++++ + G + DS +F++ L + G I A
Sbjct: 574 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAG 633
Query: 323 EVFDTMKEK 331
+ EK
Sbjct: 634 TYLSMIDEK 642
>gi|297853022|ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340234|gb|EFH70651.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 198/421 (47%), Gaps = 5/421 (1%)
Query: 113 KGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKA 172
K +E L + +S ++V +V+ R G FF WA + P+ ++SY+++V+
Sbjct: 52 KDDLEHTLAAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWAKRIPDFEHSLESYHILVEI 111
Query: 173 LGRRKFFDFMCNVLSDMAKEGVNPDL--ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLK 230
LG K F + + L + A+E ++ + IV ++ RA +A + R+ +FG+K
Sbjct: 112 LGCSKQFALLWDFLIE-AREYNYFEITSKVFWIVFRAYSRANLPSEASRAFNRMVEFGIK 170
Query: 231 FDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERV 289
+ L+ +L LC R HV A F+ KG ++ + TY+I++ GW+++ +V
Sbjct: 171 PCVDDLDQLLHSLCDRKHVNHAQEFFDKAKGFGIVPSAKTYSILVRGWARIRDASGARKV 230
Query: 290 LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYIS 349
E++ D L ++ L++ L ++G +D A ++F M G PD ++ I +Y
Sbjct: 231 FDEMLENNCVVDLLAYNALLDALCKSGDVDGAYKMFQEMGNLGLKPDAYSFAIFIHSYCD 290
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
D + M Y+ PN+ T+ +I L K+ KV DA + +EM+ +G P T T
Sbjct: 291 ASDVHSAYQVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWT 350
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
S + C + + A + + + C Y ++L+ L G+ + ++W M
Sbjct: 351 YNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRVTEIWEGMS 410
Query: 470 ESGYPSDGEIYEYVIAGLC-NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
E + Y +I GL G+LE A E + +G P L N+L+ ++
Sbjct: 411 ERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQM 470
Query: 529 E 529
+
Sbjct: 471 D 471
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 74/184 (40%)
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E + + M + +P +D +L+ L + V A E F++ GIVPS T + +
Sbjct: 156 EASRAFNRMVEFGIKPCVDDLDQLLHSLCDRKHVNHAQEFFDKAKGFGIVPSAKTYSILV 215
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
A ++ + + C + L AY LL L G ++ EM G
Sbjct: 216 RGWARIRDASGARKVFDEMLENNCVVDLLAYNALLDALCKSGDVDGAYKMFQEMGNLGLK 275
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
D + I C+ + +A V++ R P+ ++ + L + K++ AY L
Sbjct: 276 PDAYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLL 335
Query: 535 FRKI 538
++
Sbjct: 336 LDEM 339
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 62/151 (41%)
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
++A F M++ GI P + L LC + A + KA+ G S Y +L
Sbjct: 155 SEASRAFNRMVEFGIKPCVDDLDQLLHSLCDRKHVNHAQEFFDKAKGFGIVPSAKTYSIL 214
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+R + ++ EM E+ D Y ++ LC G ++ A + +E G
Sbjct: 215 VRGWARIRDASGARKVFDEMLENNCVVDLLAYNALLDALCKSGDVDGAYKMFQEMGNLGL 274
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P ++ + ++ + SAY + ++K
Sbjct: 275 KPDAYSFAIFIHSYCDASDVHSAYQVLDRMK 305
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 197/448 (43%), Gaps = 68/448 (15%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
VA DV +YN+++ L + D +L +M GV PD T + +MD +AG+ +A
Sbjct: 6 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 65
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------------------- 259
+L + + + + N ++ LC++ +V A +L +
Sbjct: 66 SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGL 125
Query: 260 --KGKV---------------LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
+G++ N++TYN +I G K + + +L+ +V+ GF PD
Sbjct: 126 CKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDV 185
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+T++ +++GL + GR+D A+++ + M ++GC P Y A++ G DE +K
Sbjct: 186 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 245
Query: 363 MSSYNCEPNMDTYTRLISGLLKS------RKVADALE----------------------- 393
M S +C + Y L++G KS +KV D +
Sbjct: 246 MVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDE 305
Query: 394 ---VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
VFE+M RG VP+ T ++ LC +G A + GC + +Y +++
Sbjct: 306 IPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIID 365
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
L K + +M ++G P D Y ++A C + ++AV +++ ++ G P
Sbjct: 366 GLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDP 425
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y+ L + L +N+L AY L ++
Sbjct: 426 DNVTYNTLISGLSQTNRLGDAYELMHEM 453
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 170/361 (47%), Gaps = 18/361 (4%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + V PD+ T +I++D +A + KA +ML + D G+ D + N ++ LC+
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
A SL M + + TYN +ISG K V + ++ E V+ GF PD +T+S
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
L +GL + GRID+A E+ M GC P+ YN +I ++ + + + S
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
P++ TYT ++ GL K ++ AL++ E ML RG PS T T+ +E LC G A
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG-------EIY 480
++K+ C AY L ++G+ K +E+ DG ++Y
Sbjct: 241 HIFKEMVSKDCTADALAYVSL---VNGYCK-------SSRTKEAQKVVDGIRGTPYIDVY 290
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
++ G C G+L+ V E+ +G P+ Y+ + + L K++ A+ +
Sbjct: 291 NALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHS 350
Query: 541 A 541
A
Sbjct: 351 A 351
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 176/409 (43%), Gaps = 38/409 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y +IV L + D ++ M K G P + T + +M+ R G+V +A +
Sbjct: 184 DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF 243
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK------------------- 262
+ DA + ++ C+ A + + ++G
Sbjct: 244 KEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRL 303
Query: 263 --------------VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
+ N+ TYNIV+ G K G+V E L+ + + G PD ++++ +
Sbjct: 304 DEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNII 363
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I+GL +A + +A +V D M + G PD YN +++ + FD+ + K M
Sbjct: 364 IDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGV 423
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG-IVPSTGTITSFLEPLCSYGPPHAAM 427
+P+ TY LISGL ++ ++ DA E+ EML G +V + T + ++ LC G A+
Sbjct: 424 DPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQAL 483
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++ G + + Y + + RL G+ L EM D Y VI GL
Sbjct: 484 LLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTVIIGL 540
Query: 488 CNIGQLENAVLVMEESLR-KGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
C QL+ A + E + KG C + ++ L + + +L+ A L
Sbjct: 541 CKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 589
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 175/394 (44%), Gaps = 15/394 (3%)
Query: 157 PNVAKD---------VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
PNV +D +K+YN+++ L + D L M G PD+ + +I++D
Sbjct: 307 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 366
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFN 266
+A + +A Q+L ++ G+ DA + N ++ C+ A + +M K V +
Sbjct: 367 LFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPD 426
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL-TFSFLIEGLGRAGRIDDAIEVF 325
+TYN +ISG S+ ++ + ++ E++ G + T++ +I+ L + G + A+ +
Sbjct: 427 NVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLM 486
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M G +T YN I G DE M + E +YT +I GL K+
Sbjct: 487 DHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEV---SYTTVIIGLCKA 543
Query: 386 RKVADALEVFEEMLD-RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
++ A ++ EM+ +G+ ++ T ++ A+ + + + GC S+
Sbjct: 544 EQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVIT 603
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y +++ L K +L+ EM G + Y +I GLC G+ + A+ V+EE
Sbjct: 604 YNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMA 663
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
L KL L + E A L R++
Sbjct: 664 SSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRM 697
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 110/237 (46%), Gaps = 8/237 (3%)
Query: 136 VNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
+++ N G+A L +++ V +YN I+ L + ++ M GV
Sbjct: 437 LSQTNRLGDAYELMHEM-LRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVE 495
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
+ T +I +D + G++ +A +L ++ D S V+ LC+ + AS L
Sbjct: 496 ANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKL 552
Query: 256 FNSM---KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
M KG + T+N++I ++K ++ E +L+ +V G SP +T++ +I L
Sbjct: 553 AREMVAVKG-LCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCL 611
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
+ ++D A E+FD M +G + +Y +I G E ++ + M+S +CE
Sbjct: 612 CKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCE 668
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 202/429 (47%), Gaps = 23/429 (5%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
+F+Q L KGV+E A N V + + + K+VN+G + D
Sbjct: 256 IFIQGLCRKGVLEGA--NSKVVEAENYLHKMVNKG-------------------LEPDDF 294
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ + +L D +G PD T ++ + G + A+ +
Sbjct: 295 TYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEA 354
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
GLK N ++ L Q+ V A L N M K + ++ TYN+VI+G K+G V
Sbjct: 355 LGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCV 414
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ +L +A+G+ PD TF+ LI+G + ++D+AI + D+M G PD YN++
Sbjct: 415 SDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSI 474
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
++ ++ M+ +K + C PN+ TY LI L K+RKV +AL++ EE+ +RG+
Sbjct: 475 LNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGL 534
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKK-ARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
+P + + + C+ G A ++++ ++ ++ Y +++ S M
Sbjct: 535 IPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQ 594
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
L+HEM + G D Y +I G C +G + + + + + GF PS + ++ N L
Sbjct: 595 KLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCL 654
Query: 523 LASNKLESA 531
+++ A
Sbjct: 655 CVQHRVHEA 663
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 170/389 (43%), Gaps = 8/389 (2%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N + SYN I+ L +F+ V M EG+ PD+ T +I + SF R + A
Sbjct: 106 NCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAA 165
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISG 276
+++L + G + +A V+ + + A LFN M +F ++ T+N ++
Sbjct: 166 LRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHI 225
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG-------RIDDAIEVFDTMK 329
K G + E E++L +++ G P+ TF+ I+GL R G ++ +A M
Sbjct: 226 LCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMV 285
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
KG PD YN +I Y VG + + K P+ TY LI G+ + +
Sbjct: 286 NKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDID 345
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
AL +FEE L +G+ PS + ++ L G A+ + K G + Y L++
Sbjct: 346 HALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVI 405
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
L G +L + GY D + +I G C +++NA+ +++ G
Sbjct: 406 NGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVT 465
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P + Y+ + N L + K E F+ I
Sbjct: 466 PDVITYNSILNGLCKAAKPEDVMETFKMI 494
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 180/444 (40%), Gaps = 57/444 (12%)
Query: 149 FFNWA------IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
+FN A +KH +A DV ++ + +K+ R K +L++M +G +
Sbjct: 126 YFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYC 185
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS-MKG 261
V+ F +A ++ ++ G+ + N ++ LC++ H+ L N +K
Sbjct: 186 TVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKN 245
Query: 262 KVLFNVMTYNIVISGWSKLG-------QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
V N+ T+NI I G + G +VVE E L ++V +G PD T++ +I G +
Sbjct: 246 GVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSK 305
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G+I DA + K KG PD Y ++I GD D + ++ +P++
Sbjct: 306 VGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVL 365
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y LI GL + V AL++ +M G+ P T + LC G A + A
Sbjct: 366 YNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAI 425
Query: 435 KVGCKLSLTAYKLLL----RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
G + + L+ +RL G+L +W G D Y ++ GLC
Sbjct: 426 AKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMW----SHGVTPDVITYNSILNGLCKA 481
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK----------------------- 527
+ E+ + + + KG P+ + Y+ L L + K
Sbjct: 482 AKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSF 541
Query: 528 ------------LESAYNLFRKIK 539
L+ AY LFR+++
Sbjct: 542 GTVISGFCNNGDLDEAYQLFRRME 565
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 179/367 (48%), Gaps = 9/367 (2%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN ++K L ++ +++DM+KEG++PD+ T ++V++ + G V A +L
Sbjct: 366 YNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAI 425
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVV 284
G D + N ++ C+RL + A + +SM V +V+TYN +++G K +
Sbjct: 426 AKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPE 485
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
++ K I+ +G P+ +T++ LIE L +A ++ +A+++ + ++ +G PD ++ VI
Sbjct: 486 DVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVI 545
Query: 345 SNYISVGDFDECMKYYKGM-SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
S + + GD DE + ++ M Y + TY +I+ + + A ++F EM D+G
Sbjct: 546 SGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGC 605
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P + T ++ C G ++ K ++G SLT + ++ L + +
Sbjct: 606 DPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVG 665
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG---FCPSRLVYSKLSN 520
+ H M +G + + + + + +++E+ L+K + L+Y + N
Sbjct: 666 IVHLMVRTGVVPEAVVTIFD----ADKKAVAAPKIIVEDLLKKSHITYYAYELLYDGIRN 721
Query: 521 KLLASNK 527
K L NK
Sbjct: 722 KKLQKNK 728
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 111/276 (40%), Gaps = 7/276 (2%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
Y + + + G+V E V + + P +++ ++ L G + A +V+ M
Sbjct: 78 VYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRM 137
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
K +G PD + I ++ ++ M S CE N Y +ISG +
Sbjct: 138 KHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQ 197
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A E+F +ML GI P T + LC G + K K G +L + +
Sbjct: 198 VEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIF 257
Query: 449 LRRLSGFG-------KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
++ L G K + H+M G D Y +I G +G++++A +++
Sbjct: 258 IQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILK 317
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
++ KGF P Y L + ++ A LF +
Sbjct: 318 DAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEE 353
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 85/178 (47%), Gaps = 2/178 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
++ +YN+++++L + + ++L ++ G+ PD + V+ F G + +A Q+
Sbjct: 502 NIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLF 561
Query: 222 GRLED-FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSK 279
R+E + + + N+++ ++L + A LF+ M K + TY ++I G+ K
Sbjct: 562 RRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCK 621
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+G V L + + GF P TF +I L R+ +A+ + M G P+
Sbjct: 622 VGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEA 679
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L++++ +G+I D + V + N G+L EA LF ++ + V +
Sbjct: 525 LLEEIRNRGLIPDPVSFGTV------ISGFCNNGDLD-EAYQLFRRMEQQY-RICHTVAT 576
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN+++ A + D + +M +G +PD T +++D F + G V L +
Sbjct: 577 YNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEI 636
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
+ G + V+ CLC + V A + + M
Sbjct: 637 EIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLM 670
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 87/243 (35%), Gaps = 34/243 (13%)
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+GF LT+ +IE LG G D V M+ N N+++
Sbjct: 34 DGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMR-------LNVDNSLLEGV-------- 78
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
Y M +Y + KV +A++VFE M PS + + +
Sbjct: 79 ---YVSAMRNYG----------------RKGKVQEAVDVFERMDFYNCEPSIFSYNAIMN 119
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
L YG + A +Y + + G + + + ++ + L L + M G
Sbjct: 120 ILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCEL 179
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ +Y VI+G A + + LR G P ++KL + L L+ L
Sbjct: 180 NAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLL 239
Query: 536 RKI 538
K+
Sbjct: 240 NKV 242
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 198/425 (46%), Gaps = 41/425 (9%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
P+V K V+V R + D + ++ M ++ + D+ + +I++ F ++
Sbjct: 77 PSVVDFCKLMGVVV----RMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPF 132
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVIS 275
A+ G+L GL D + N +L LC V A +LF+ M + NV+T+ +++
Sbjct: 133 ALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMN 192
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG------------------------ 311
G + G++VE +L ++ +G P +T+ +++G
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252
Query: 312 ------------LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
L + GR DA +F M+EKG PD YN++I + S G + + +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ M P++ TY LI+ +K K +A E+++EML RGI+P+T T +S ++ C
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
AA M+ GC +L + L+ G + ++L HEM E+G +D
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y +I G +G L A+ +++E + G CP + L + L + KL+ A +F+ ++
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Query: 540 IARQN 544
++++
Sbjct: 493 KSKKD 497
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 190/431 (44%), Gaps = 47/431 (10%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
++ +V Y+ I+ +L + N+ ++M ++G+ PDL T + ++ F +G+ A
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDA 309
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
Q+L + + + D + N ++ + A L++ M + ++ N +TY+ +I G
Sbjct: 310 EQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG 369
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K ++ E + + +G SP+ +TF+ LI+G A RIDD +E+ M E G D
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGM-SSYNC--------------------------- 368
T YN +I + VGD + + + M SS C
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489
Query: 369 ------------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
EP++ TY LISGL+ K +A E++EEM RGIVP T T
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+S ++ LC A M+ ++ + L+ G+ L+L+ EM
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G ++ Y +I G +G + A+ + +E + G P + + L + +L+
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669
Query: 531 AYNLFRKIKIA 541
A + K++++
Sbjct: 670 AVAMLEKLQMS 680
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 188/380 (49%), Gaps = 4/380 (1%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML- 221
+ +YN ++ A + + MA++G PD+ T S ++ + G+V +A++ML
Sbjct: 78 IYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLF 137
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSK 279
++ + G + + N ++ LC+ ++ A L M KG V N+ TYN ++SG +
Sbjct: 138 HKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI-TYNTILSGLCR 196
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
+G+V E ++ + + G+SPD + ++ L++ L + G+ D+A+++F + KG PDT
Sbjct: 197 MGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVT 256
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YN+++ + DE + +K M + C PN TY+ ++SG +++KV DA +V EEM
Sbjct: 257 YNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMS 316
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
G VP T L+ LC A ++ GC + +Y ++L L K
Sbjct: 317 KIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVH 376
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
L+ M E D + ++ GLC G+L+ A ++++ G P + Y+ L
Sbjct: 377 DARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLM 436
Query: 520 NKLLASNKLESAYNLFRKIK 539
N L + A L + +K
Sbjct: 437 NGLRKQGRHIQADRLTQAMK 456
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 192/411 (46%), Gaps = 37/411 (9%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++ V++K+ ++ + M G++PD +I++D + + G+V +A ++ +
Sbjct: 10 TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEM 69
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQV 283
GL+ + N +L C+ + A LF +M K +V+TY+ +ISG K G+V
Sbjct: 70 VSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKV 129
Query: 284 VE---------MER---------------------------VLKEIVAEGFSPDSLTFSF 307
E +ER +L+E+ ++G+ PD++T++
Sbjct: 130 TEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNT 189
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
++ GL R G++ +A + FD+M +G PD AYN ++ G DE MK +K + +
Sbjct: 190 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKG 249
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
P+ TY ++ GL + + +A E+F++M+ G P+ T + L C A
Sbjct: 250 YMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAH 309
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+ ++ K+G + Y +LL L +L+ M ++G D Y V+ GL
Sbjct: 310 KVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGL 369
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
C ++ +A ++ + + + P + ++ L + L + KL+ A +L ++
Sbjct: 370 CKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQM 420
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 2/334 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ + F+ I+ A V +YN ++ L + + + +L +MA +G PD T +
Sbjct: 131 EALEMLFHKMIERGCSANTV-AYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNT 189
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
++ R G+V +A Q + G D + N +L L + A LF + K
Sbjct: 190 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKG 249
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ + +TYN ++ G ++ + E E + K++VA G +P+ T+S ++ G RA ++DDA
Sbjct: 250 YMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAH 309
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+V + M + G PD YN ++ D+ + + M C P++ +Y+ +++GL
Sbjct: 310 KVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGL 369
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K+ KV DA +F+ M++R +VP T ++ LC G A + + GC
Sbjct: 370 CKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDY 429
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
AY L+ L G+ L M+E G+ SD
Sbjct: 430 VAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 117/241 (48%), Gaps = 1/241 (0%)
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
SP+ TF +++ + G++ D ++F+ M + G PD YN +I Y G DE +
Sbjct: 5 SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
Y+ M S EP++ TY L++ K K+ +A+E+F+ M ++G P T ++ + LC
Sbjct: 65 LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124
Query: 419 SYGPPHAAM-MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
G A+ M++ K + GC + AY L+ L L EM GY D
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
Y +++GLC +G++ A + +G+ P + Y+ L + L K + A LF+
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244
Query: 538 I 538
+
Sbjct: 245 V 245
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 137/274 (50%), Gaps = 1/274 (0%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N T+ +V+ + K G++ + ++ ++++ G SPD + ++ LI+G + GR+D+A ++
Sbjct: 7 NRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLY 66
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ M G P YN++++ + E M+ +K M+ EP++ TY+ +ISGL K+
Sbjct: 67 EEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKT 126
Query: 386 RKVADALE-VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
KV +ALE +F +M++RG +T + + LC A + ++ G
Sbjct: 127 GKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNIT 186
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y +L L GK + M GY D Y ++ L G+ + A+ + ++ +
Sbjct: 187 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVI 246
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
KG+ P + Y+ + L + ++ A +F+K+
Sbjct: 247 AKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKM 280
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 1/172 (0%)
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
C PN T+ ++ K K+ D ++FE+MLD GI P ++ G A
Sbjct: 4 CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+Y++ VG + S+ Y LL K ++L+ M E G+ D Y +I+GL
Sbjct: 64 RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123
Query: 488 CNIGQLENAV-LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
C G++ A+ ++ + + +G + + Y+ L N L +E AY L ++
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEM 175
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 186/388 (47%), Gaps = 7/388 (1%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFD---FMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
P+V +D SYN ++ AL R+ D F+ V+S + P+ + + +M + +
Sbjct: 51 PSV-RDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRR 109
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
+A+ +L ++D G++ D + ++ LC V A L N M + + NV+ Y+
Sbjct: 110 AAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSC 169
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
++ G+ K G+ + +V +E+ G PD + ++ LI+ L R G++ A V D M E+G
Sbjct: 170 LLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERG 229
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ YN +I++ G E + K MS +P++ TY LI+GL ++ +A+
Sbjct: 230 LEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAM 289
Query: 393 EVFEEML--DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
+ EEM+ + + P T S + LC G A+ + + GC+ +L A+ LL+
Sbjct: 290 ALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIG 349
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
L K ++L EM SG D Y +I G C + Q+E A + E +G P
Sbjct: 350 GLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEP 409
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y L + + A +LF ++
Sbjct: 410 EPVHYIPLLKAMCDQGMMGQARDLFNEM 437
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 136/552 (24%), Positives = 239/552 (43%), Gaps = 54/552 (9%)
Query: 2 AFLSRFYRTRYPLSSLSSSFSLFSFSTSVRSNLSYNELLSNQKKNMSSLDEHHVLKELSD 61
A L+R R L L S +L S SVR +SYN +L+ +L L
Sbjct: 29 ARLNRHLR----LLPLPESPALLSALPSVRDAVSYNTVLA-------ALCRQGCLDAALF 77
Query: 62 LFQISSHNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGV--FLQKLKGKGVIEDA 119
L ++ SH P + SR N++ RA L + R L+ ++ GV D
Sbjct: 78 LLRVMSHE--PRL--ASRPNAISYTTLMRA----LCADRRAAQAVGLLRSMQDCGVRPDV 129
Query: 120 LW----------NVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVI 169
+ +VD +++++ ++ G PNV Y+ +
Sbjct: 130 VTYGTLIRGLCDAADVDTAVELLNEMCESG---------------IEPNVV----VYSCL 170
Query: 170 VKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGL 229
+ + ++ + V +M+ G+ PD+ + ++DS R G+V KA +++ + + GL
Sbjct: 171 LHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGL 230
Query: 230 KFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMER 288
+ + + NV++ +C+ V A L +M K V +V+TYN +I+G S + ++ E
Sbjct: 231 EPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMA 290
Query: 289 VLKEIVA--EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
+L+E++ PD +TF+ +I GL + G + A++V M E GC + A+N +I
Sbjct: 291 LLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGG 350
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
+ V + M+ M+S +P+ TY+ LI+G K R+V A EM +G+ P
Sbjct: 351 LLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPE 410
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
L+ +C G A ++ + + CKL AY ++ G+ + +
Sbjct: 411 PVHYIPLLKAMCDQGMMGQARDLFNEMDR-NCKLDAAAYSTMIHGAFKSGEKKIAEEFLK 469
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
+M + G D Y I G L A V+++ GF P V+ L A
Sbjct: 470 DMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKG 529
Query: 527 KLESAYNLFRKI 538
E L R++
Sbjct: 530 DTEKILELTREM 541
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 126/258 (48%), Gaps = 3/258 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++N+++ L R ++ +MA G+ PD T SI+++ F + QV +A L +
Sbjct: 343 AFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEM 402
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVV 284
G++ + +L +C + +G A LFN M + Y+ +I G K G+
Sbjct: 403 RHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKK 462
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E LK+++ EG PD++T+S I ++G + A V M G PD ++++I
Sbjct: 463 IAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLI 522
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL---LKSRKVADALEVFEEMLDR 401
Y + GD ++ ++ + M++ + + + +++ L ++ +K+ +L F+ + +
Sbjct: 523 QGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSLGASIEGQKLLQSLPGFDTEISK 582
Query: 402 GIVPSTGTITSFLEPLCS 419
G V S + + L+ C+
Sbjct: 583 GDVISPHDVMNMLQKHCT 600
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 155/366 (42%), Gaps = 37/366 (10%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV Y ++ +L R V+ M + G+ P++ T +++++S + G V +A+
Sbjct: 195 IEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREAL 254
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM---KGKVLFNVMTYNIVIS 275
+ + + G++ D + N ++ L L + A +L M + +V ++MT+N VI
Sbjct: 255 DLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIH 314
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G K+G + + +V + G + + F+ LI GL R ++ A+E+ D M G P
Sbjct: 315 GLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQP 374
Query: 336 DTNAYNAVISNYISVGDFDECMKY-----YKGMSS------------------------- 365
D+ Y+ +I+ + + + Y ++GM
Sbjct: 375 DSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLF 434
Query: 366 ----YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
NC+ + Y+ +I G KS + A E ++M+D G++P T + + G
Sbjct: 435 NEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSG 494
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
AA + K+ G + + L++ G +L+L EM D +I
Sbjct: 495 DLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIIS 554
Query: 482 YVIAGL 487
++ L
Sbjct: 555 TIVTSL 560
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 176/383 (45%), Gaps = 5/383 (1%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV +Y+ I+ AL + + D VL+ M K GV P+ T + ++ + +GQ +
Sbjct: 232 PNVV----TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKE 287
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVIS 275
AI L ++ G++ D + N ++ LC+ A +F+SM + L + TY ++
Sbjct: 288 AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQ 347
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G++ G +VEM +L +V G P+ FS LI + G++D A+ VF M+++G P
Sbjct: 348 GYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP 407
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
DT Y VI G ++ M+Y++ M P Y LI L K A E+
Sbjct: 408 DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELI 467
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
EMLDRGI T S ++ C G + ++ ++G K + Y L+
Sbjct: 468 LEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLA 527
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
GK L M G D Y +I G C I ++E+A+++ E G P + Y
Sbjct: 528 GKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITY 587
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
+ + L + + +A L+ I
Sbjct: 588 NIILQGLFQTRRTAAAKELYVGI 610
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 164/369 (44%), Gaps = 13/369 (3%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
++ +Y +++ + M +L M + G++P+ SI++ ++ + G+V +A+ +
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------KGKVLFNVMTYNIVI- 274
++ GL D + V+ LC+ V A F M G +++N + +++ I
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
W K +++ E++ G D++ F+ +I+ + GR+ ++ ++FD M G
Sbjct: 458 DKWDKAKELI------LEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 511
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD Y+ +I Y G DE K M S +P+ TY LI+G K ++ DAL +
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F EM G+ P T L+ L AA +Y + G +L L+ Y ++L L
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
L ++ + + + + +I L +G+ + A + G P
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Query: 515 YSKLSNKLL 523
YS ++ L+
Sbjct: 692 YSLMAENLI 700
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 150/356 (42%), Gaps = 38/356 (10%)
Query: 189 MAKEG---VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
MA+ G V P+L T I++ S AG++ LG + G + DA + +L LC
Sbjct: 79 MARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 138
Query: 246 RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
A M+ VL+ + G P+ ++
Sbjct: 139 DKRTSDA---------------------------------MDIVLRRMTQLGCIPNVFSY 165
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKG--CGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
+ L++GL R +A+E+ M + G C PD +Y VI+ + GD D+ Y M
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM 225
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
PN+ TY+ +I+ L K++ + A+EV M+ G++P+ T S + CS G P
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+ KK G + + Y L+ L G+C ++ M + G + Y +
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ G G L +++ +R G P+ V+S L K++ A +F K++
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 153/337 (45%), Gaps = 5/337 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HPN +++++ A ++ D V S M ++G+NPD T V+ ++G+V
Sbjct: 371 HPNH----YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
A++ ++ D L N ++ LC A L M + + + + +N +I
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
K G+V+E E++ +V G PD +T+S LI+G AG++D+A ++ +M G
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN +I+ Y + ++ + ++ M S P++ TY ++ GL ++R+ A A E+
Sbjct: 547 PDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ + + G T L LC A+ M++ +L + +++ L
Sbjct: 607 YVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 666
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
G+ DL+ + +G D Y + L G
Sbjct: 667 VGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 703
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 93/199 (46%), Gaps = 1/199 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN ++ + + + +M GV+PD+ T +I++ + + A ++
Sbjct: 548 DCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 607
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
+ + G + + + N++L LC+ A +F ++ + T+NI+I K+
Sbjct: 608 VGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKV 667
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ E + + + A G PD T+S + E L G +++ ++F +M+E GC ++
Sbjct: 668 GRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRML 727
Query: 341 NAVISNYISVGDFDECMKY 359
N+++ + GD Y
Sbjct: 728 NSIVRKLLQRGDITRAGTY 746
>gi|147782978|emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]
Length = 708
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 204/413 (49%), Gaps = 15/413 (3%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E AL V V+L+ D+V +++ + + + FF WA + + ++YN ++ L
Sbjct: 226 MEKALDLVGVELTTDLVIEILGKIHFEEKMAFRFFMWAGHQDCYSHEPRAYNEMIDILSS 285
Query: 176 RKF----FDFMCNVLSDMAK-EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLK 230
K+ F +C++L M + + + +E L +++ + + + + + +K
Sbjct: 286 TKYKVKQFRIVCDMLDYMKRNDKKSVPVEVLLMILRKYTEKHLAH--LHKFAKKKKIRVK 343
Query: 231 FDAE--SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMER 288
E +LN++L LC+ V A ++F +K KV + TYNI+ GW ++ R
Sbjct: 344 TQPEINALNLLLDALCKCSLVEDAQAMFRRVKNKVKPDANTYNILFFGWCRVRNPSRGMR 403
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC---GPDTNAYNAVIS 345
VL+E++ G +PDS T++ I+ +AG + +A E+F+ M+ KG P Y +I
Sbjct: 404 VLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMIL 463
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+ +EC K K M + P++ TY ++I G+ + KV +A + EEM ++G P
Sbjct: 464 ALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRP 523
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
T FL+ LC A+ +Y + + GC S+ + +L+ G+ + W
Sbjct: 524 DIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETW 583
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
HEM + G D + Y +I GL N ++E+A +++E + KG +L Y K
Sbjct: 584 HEMDKRGCARDTDTYCVMIEGLFNCNKMEDACFLLDEVINKGI---KLPYRKF 633
>gi|242056423|ref|XP_002457357.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
gi|241929332|gb|EES02477.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
Length = 543
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 187/397 (47%), Gaps = 5/397 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+ DAL V + D++ V+ + + + + FFNWA P A ++Y ++ LGR
Sbjct: 105 LSDALRRFAVHMDEDIILTVLQKQRSNWQVALAFFNWAATLPGYAHGSRAYTEMLDILGR 164
Query: 176 RKFFDFMCNVLSDMAKEG--VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA 233
K M + ++ +E V + +++++ + A +V +AI++ +D+G + D
Sbjct: 165 MKKVRHMRQLFDEIPEERRVVVVTNKMFAVLLNRYAGAHKVQEAIEVFYLRKDYGFELDL 224
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
++L LC+ HV A +LF K + ++NI+++GW G + + +R+ +I
Sbjct: 225 VGFQILLMSLCRYKHVEEAEALFREKKDEFPHVTKSWNIILNGWCVKGSLRDAQRIWNDI 284
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+A D T+ I L + GRI A+++F M E G PD N +I
Sbjct: 285 IASKVERDLFTYGTFINALAKNGRISAAVKLFKKMWETGINPDVAICNCIIDQLCFKNRI 344
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
E ++ + M+ C+ ++ TY LI L K +++ E+ ++M +G P+ T +
Sbjct: 345 PEALEIFGEMNDRLCQADVATYNTLIKYLCKKKRMEKVYELLDDMEAKGCSPNNRTYSYV 404
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
L+ + P + + ++ + GC+L Y L+L + + + +W EM+ +G
Sbjct: 405 LK---TTEKPKDVIALMQRMEQTGCELDSDTYNLILNLYTNWKYEKGVQQVWDEMERNGS 461
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
D + ++ GL + G+L+ A+ +G P
Sbjct: 462 GPDQRSFTIMVHGLHSQGKLDEALQYYTTMKSRGMIP 498
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 152/331 (45%), Gaps = 24/331 (7%)
Query: 97 LPEER--------LRGVFLQKLKGKGVIEDAL----WNVNVDLSLDVVGKVV-----NRG 139
+PEER + V L + G +++A+ + LD+VG + R
Sbjct: 178 IPEERRVVVVTNKMFAVLLNRYAGAHKVQEAIEVFYLRKDYGFELDLVGFQILLMSLCRY 237
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
EA LF + P+V KS+N+I+ + + +D+ V DL
Sbjct: 238 KHVEEAEALFREKKDEFPHV---TKSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLF 294
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
T +++ + G++ A+++ ++ + G+ D N ++ LC + + A +F M
Sbjct: 295 TYGTFINALAKNGRISAAVKLFKKMWETGINPDVAICNCIIDQLCFKNRIPEALEIFGEM 354
Query: 260 KGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
++ +V TYN +I K ++ ++ +L ++ A+G SP++ T+S++++ +
Sbjct: 355 NDRLCQADVATYNTLIKYLCKKKRMEKVYELLDDMEAKGCSPNNRTYSYVLKTTEKP--- 411
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
D I + M++ GC D++ YN +++ Y + + + M P+ ++T +
Sbjct: 412 KDVIALMQRMEQTGCELDSDTYNLILNLYTNWKYEKGVQQVWDEMERNGSGPDQRSFTIM 471
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
+ GL K+ +AL+ + M RG++P T
Sbjct: 472 VHGLHSQGKLDEALQYYTTMKSRGMIPEPRT 502
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 105/236 (44%), Gaps = 6/236 (2%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V +D+ +Y + AL + + M + G+NPD+ + ++D ++ +A+
Sbjct: 289 VERDLFTYGTFINALAKNGRISAAVKLFKKMWETGINPDVAICNCIIDQLCFKNRIPEAL 348
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ G + D + D + N ++ LC++ + L + M+ K N TY+ V+
Sbjct: 349 EIFGEMNDRLCQADVATYNTLIKYLCKKKRMEKVYELLDDMEAKGCSPNNRTYSYVLKTT 408
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K V+ + ++ + G DS T++ ++ +V+D M+ G GPD
Sbjct: 409 EKPKDVIAL---MQRMEQTGCELDSDTYNLILNLYTNWKYEKGVQQVWDEMERNGSGPDQ 465
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
++ ++ S G DE ++YY M S P + T+++ + +K A E
Sbjct: 466 RSFTIMVHGLHSQGKLDEALQYYTTMKSRGMIP--EPRTKILVKAMHMKKDGAATE 519
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/251 (18%), Positives = 106/251 (42%), Gaps = 5/251 (1%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEG--FSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
Y ++ ++ +V M ++ EI E + F+ L+ A ++ +AIEVF
Sbjct: 154 AYTEMLDILGRMKKVRHMRQLFDEIPEERRVVVVTNKMFAVLLNRYAGAHKVQEAIEVFY 213
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM-DTYTRLISGLLKS 385
K+ G D + ++ + +E ++ + P++ ++ +++G
Sbjct: 214 LRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFR--EKKDEFPHVTKSWNIILNGWCVK 271
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+ DA ++ +++ + T +F+ L G AA+ ++KK + G +
Sbjct: 272 GSLRDAQRIWNDIIASKVERDLFTYGTFINALAKNGRISAAVKLFKKMWETGINPDVAIC 331
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
++ +L + L+++ EM + +D Y +I LC ++E ++++
Sbjct: 332 NCIIDQLCFKNRIPEALEIFGEMNDRLCQADVATYNTLIKYLCKKKRMEKVYELLDDMEA 391
Query: 506 KGFCPSRLVYS 516
KG P+ YS
Sbjct: 392 KGCSPNNRTYS 402
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 181/356 (50%), Gaps = 1/356 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
++ M + G PDL T V++ + G + A+ +L ++E ++ D N ++ LC
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ H+ A +LF M K + +V TY+ +IS G+ + R+L +++ +P+ +
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
TFS LI+ + G++ +A +++D M ++ PD Y+++I+ + DE ++ M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
S +C PN+ TY+ LI G K+++V + +E+F EM RG+V +T T T+ +
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A M++K+ VG ++ Y +LL L GK + ++ +Q S D Y +
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I G+C G++E+ + KG P+ + Y+ + + E A +L +K+K
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK 565
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 183/379 (48%), Gaps = 1/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y +V L +R D ++L M K + D+ + ++D + + A+ +
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+++ G++ D + + ++ CLC AS L + M + K+ NV+T++ +I + K
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++VE E++ E++ PD T+S LI G R+D+A +F+ M K C P+ Y
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 401
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +I + +E M+ ++ MS N TYT LI G ++R +A VF++M+
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 461
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ P+ T L+ LC G AM++++ ++ + + Y +++ + GK
Sbjct: 462 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVED 521
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+L+ + G + Y +I+G C G E A ++++ G P+ Y+ L
Sbjct: 522 GWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIR 581
Query: 521 KLLASNKLESAYNLFRKIK 539
L E++ L ++++
Sbjct: 582 ARLRDGDREASAELIKEMR 600
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 164/376 (43%), Gaps = 34/376 (9%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ +N ++ A+ + F+ + ++ M G++ DL T SI ++ F R Q+ A+ +L
Sbjct: 83 IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLA 142
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQ 282
++ G + D +L+ +L C + A +L + Q
Sbjct: 143 KMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD------------------------Q 178
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+VEM G+ PD+ TF+ LI GL + +A+ + D M ++GC PD Y
Sbjct: 179 MVEM----------GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
V++ GD D + K M E ++ Y +I GL K + + DAL +F EM ++G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
I P T +S + LC+YG A + + ++ + L+ GK
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
L+ EM + D Y +I G C +L+ A + E + K P+ + YS L
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 523 LASNKLESAYNLFRKI 538
+ ++E LFR++
Sbjct: 409 CKAKRVEEGMELFREM 424
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 200/440 (45%), Gaps = 16/440 (3%)
Query: 102 LRGVFLQKLKGKGV-IEDALWNVNVDLSLDVVGKVVN----RGNLSGEAMVLFFNWAIKH 156
+ G+FL + V + D + L G VVN RG++ + L ++
Sbjct: 195 IHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID---LALSLLKKMEK 251
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
+ DV YN I+ L + K D N+ ++M +G+ PD+ T S ++ G+
Sbjct: 252 GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 311
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVIS 275
A ++L + + + + + + ++ + + A L++ M K + ++ TY+ +I+
Sbjct: 312 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 371
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G+ ++ E + + + ++++ P+ +T+S LI+G +A R+++ +E+F M ++G
Sbjct: 372 GFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+T Y +I + D D +K M S PN+ TY L+ GL K+ K+A A+ VF
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 491
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
E + + P T +E +C G ++ G ++ AY + +SGF
Sbjct: 492 EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTM---ISGF 548
Query: 456 GKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
+ G + L +M+E G + Y +I G E + +++E GF
Sbjct: 549 CRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDA 608
Query: 513 LVYSKLSNKLLASNKLESAY 532
++N +L +L+ ++
Sbjct: 609 STIGLVTN-MLHDGRLDKSF 627
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 105/237 (44%), Gaps = 35/237 (14%)
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISN---------YISVGDFDECMKYYKGMSSY- 366
++DDA+++F M + P +N ++S IS+G+ + + + +Y
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 367 ---NC----------------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
NC EP++ T + L++G S++++DA+ + ++M++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G P T T T+ + L + A+ + + + GC+ L Y ++ L G +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
L L +M++ +D IY +I GLC +++A+ + E KG P YS L
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
>gi|125524449|gb|EAY72563.1| hypothetical protein OsI_00429 [Oryza sativa Indica Group]
Length = 535
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 190/407 (46%), Gaps = 5/407 (1%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L+ G + + L + ++ DVV KV+ + + + + FF WA P ++
Sbjct: 89 ILKSRDGDSELAEVLNQFSDEMDEDVVLKVLQKQRSNWKVALSFFKWAAGLPQYNHGSRA 148
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET--LSIVMDSFIRAGQVYKAIQMLGR 223
Y ++ LGR K M + ++ E + +++++ + A +V +AI M +
Sbjct: 149 YTEMLDILGRMKKVRLMRQLFDEIPMESRQSVITNRMFAVLLNRYAGAHKVQEAIDMFYK 208
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQV 283
+D+G + D ++L LC+ HV A +LF K + + ++NI+++GW G +
Sbjct: 209 RKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSL 268
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ +RV EI+A PD T+ I L ++G++ A+++F +M EKG PD N +
Sbjct: 269 ADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCI 328
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I E ++ + M+ C+ ++ TY LI K ++ E+ ++M +G+
Sbjct: 329 IDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGV 388
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T + L+ + P + + ++ K GC+L Y L+L + +
Sbjct: 389 SPNNMTYSYILK---TTEKPKDVISLMQRMEKSGCRLDSDTYNLILNLYVSWDYEKGVQL 445
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
+W EM+ +G D + ++ GL + G+L+ A+ +G P
Sbjct: 446 VWDEMERNGSGPDQRSFTIMVHGLHSHGKLDEALHYYRTMESRGMTP 492
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 3/241 (1%)
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMK-EKGCGPDTNAYNAVISN-YISVGDFDECMKY 359
S ++ +++ LGR ++ ++FD + E TN AV+ N Y E +
Sbjct: 146 SRAYTEMLDILGRMKKVRLMRQLFDEIPMESRQSVITNRMFAVLLNRYAGAHKVQEAIDM 205
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ Y E ++ + L+ L + + V +A +F + D P + L C
Sbjct: 206 FYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKDE-FPPVIKSWNIILNGWCV 264
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
G A ++ + K L Y + L+ GK + L+ M E G D I
Sbjct: 265 KGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAI 324
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I LC ++ A+ + E +G Y+ L N++E Y L ++
Sbjct: 325 CNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDME 384
Query: 540 I 540
+
Sbjct: 385 V 385
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 193/383 (50%), Gaps = 2/383 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSD-MAKEGVNPDLETLSIVMDSFIRAGQVYK 216
VA +V +YN++V+AL R + V+ D M G P++ T + ++ +F RAG+V
Sbjct: 149 GVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDA 208
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVIS 275
A +++G + + G++ + N V+ LC+ + A +F+ M + L + ++YN ++S
Sbjct: 209 AERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVS 268
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G+ K G + E V E+ +G PD +TF+ LI + RAG ++ A+ + M+E+G
Sbjct: 269 GYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRM 328
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+ + A+I + G D+ + K M +P++ Y LI+G K ++ +A E+
Sbjct: 329 NEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELI 388
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
EM +G+ P T ++ L C G +A + +K K G Y L+R L
Sbjct: 389 HEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEE 448
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
+ G +L+ +M + G D Y +I G C G ++ A+ + +E ++KG P + Y
Sbjct: 449 RRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTY 508
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
S L + L S + + A L K+
Sbjct: 509 SVLIDGLSKSARTKEAQRLLFKL 531
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 184/388 (47%), Gaps = 37/388 (9%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A + +YN ++ AL +L+ M ++GV P++ T +I++ + GQ +A+
Sbjct: 117 APSLLAYNAVLLALSDASLPSAR-RLLASMLRDGVAPNVYTYNILVRALCARGQREEALG 175
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
++G + M+G NV+TYN +++ +
Sbjct: 176 VVG----------------------------------DDMRGAGCAPNVVTYNTLVAAFC 201
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
+ G+V ER++ + G P +TF+ ++ GL +AGR++DA ++FD M +G PD
Sbjct: 202 RAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGV 261
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
+YN ++S Y G E + + M+ P++ T+T LI + ++ + A+ + +M
Sbjct: 262 SYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQM 321
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+RG+ + T T+ ++ C G A++ K+ R+ + S+ Y +L+ G+
Sbjct: 322 RERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRM 381
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+L HEM+ G D Y +++G C IG ++A + + L+KG P + YS L
Sbjct: 382 DEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSL 441
Query: 519 SNKLLASNKLESAYNLFRK-IKIARQND 545
L +L A LF K +++ Q D
Sbjct: 442 IRGLCEERRLGDACELFEKMLQLGLQPD 469
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 192/443 (43%), Gaps = 65/443 (14%)
Query: 154 IKHPNVAKDVKSYNVIVKAL---GR----RKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
++ V + ++N +V L GR RK FD +MA+EG+ PD + + ++
Sbjct: 216 MREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFD-------EMAREGLTPDGVSYNTLVS 268
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-F 265
+ +AG +++A+ + + G+ D + ++ +C+ ++ A +L M+ + L
Sbjct: 269 GYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRM 328
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N T+ +I G+ + G + + +KE+ P + ++ LI G + GR+D+A E+
Sbjct: 329 NEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELI 388
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
M+ KG PD Y+ ++S Y +GD D + + M P+ TY+ LI GL +
Sbjct: 389 HEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEE 448
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
R++ DA E+FE+ML G+ P T T+ ++ C G A+ ++ + K G + Y
Sbjct: 449 RRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTY 508
Query: 446 KLLLRRLS-----------------------------------------------GFGKC 458
+L+ LS GF
Sbjct: 509 SVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMK 568
Query: 459 GMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
G++ ++ M + + DG +Y +I G C G + A+ ++ LR GF P+
Sbjct: 569 GLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTST 628
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
L L A N+ +++
Sbjct: 629 ISLVRGLFEEGMTVEADNVIQEL 651
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 119/255 (46%), Gaps = 16/255 (6%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y+ I+ + D + M K+GV PD T S ++ ++ A ++
Sbjct: 399 DVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELF 458
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
++ GL+ D + ++ C+ +V A SL + M K VL +V+TY+++I G SK
Sbjct: 459 EKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKS 518
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFL---------------IEGLGRAGRIDDAIEVF 325
+ E +R+L ++ E PD++ + L ++G G ++ A +V+
Sbjct: 519 ARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVY 578
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+M ++ D + Y+ +I + G+ + + ++K + PN + L+ GL +
Sbjct: 579 QSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEE 638
Query: 386 RKVADALEVFEEMLD 400
+A V +E+L+
Sbjct: 639 GMTVEADNVIQELLN 653
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 109/250 (43%), Gaps = 8/250 (3%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
G++P L ++ ++ L A + A + +M G P+ YN ++ + G +E
Sbjct: 115 GYAPSLLAYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 357 MKYY-KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+ M C PN+ TY L++ ++ +V A + M + G+ PS T + +
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESG 472
LC G A M+ + + G +Y L +SG+ K G L L ++ EM + G
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTL---VSGYCKAGCLHEALAVFAEMAQKG 290
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
D + +I +C G LE AV ++ + +G + ++ L + + L+ A
Sbjct: 291 VVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDAL 350
Query: 533 NLFRKIKIAR 542
++++ R
Sbjct: 351 LAMKEMRECR 360
>gi|225427504|ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Vitis vinifera]
Length = 709
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 204/413 (49%), Gaps = 15/413 (3%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E AL V V+L+ D+V +++ + + + FF WA + + ++YN ++ L
Sbjct: 253 MEKALDLVGVELTTDLVIEILGKIHFEEKMAFRFFMWAGHQDCYSHEPRAYNEMIDILSS 312
Query: 176 RKF----FDFMCNVLSDMAK-EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLK 230
K+ F +C++L M + + + +E L +++ + + + + + +K
Sbjct: 313 TKYKVKQFRIVCDMLDYMKRNDKKSVPVEVLLMILRKYTEKHLAH--LHKFAKKKKIRVK 370
Query: 231 FDAE--SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMER 288
E +LN++L LC+ V A ++F +K KV + TYNI+ GW ++ R
Sbjct: 371 TQPEINALNLLLDALCKCSLVEDAQAMFRRVKNKVKPDANTYNILFFGWCRVRNPSRGMR 430
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC---GPDTNAYNAVIS 345
VL+E++ G +PDS T++ I+ +AG + +A E+F+ M+ KG P Y +I
Sbjct: 431 VLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMIL 490
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+ +EC K K M + P++ TY ++I G+ + KV +A + EEM ++G P
Sbjct: 491 ALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRP 550
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
T FL+ LC A+ +Y + + GC S+ + +L+ G+ + W
Sbjct: 551 DIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETW 610
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
HEM + G D + Y +I GL N ++E+A +++E + KG +L Y K
Sbjct: 611 HEMDKRGCARDTDTYCVMIEGLFNCNKMEDACFLLDEVVNKGI---KLPYRKF 660
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 172/378 (45%), Gaps = 1/378 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +V +Y ++ L + + D V M +GV PD +T + ++ ++ G+ + +
Sbjct: 234 IQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVV 293
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+ML + GLK D + +L LC A LF+SM K + NV Y I+I G+
Sbjct: 294 RMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGY 353
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G + EM +L +V G SPD F+ + + ID+A+ +F+ MK++G PD
Sbjct: 354 ATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDV 413
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y A+I +G D+ + + M + PN+ + L+ GL K A E + E
Sbjct: 414 VNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFE 473
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
ML++GI P + L LC+ G A + +VG + + +Y L+ G+
Sbjct: 474 MLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGR 533
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
M G D Y ++ G C G++++A V E LR G P + YS
Sbjct: 534 IDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYST 593
Query: 518 LSNKLLASNKLESAYNLF 535
+ + L + + A L+
Sbjct: 594 ILHGLFTTRRFSEAKELY 611
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 180/419 (42%), Gaps = 45/419 (10%)
Query: 162 DVKSYNVIVKALGRRKFFDF---MCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
DV SYN ++K K + + ++++D P++ + +IV++ F GQV KA
Sbjct: 164 DVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAY 223
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+ + D G++ + + V+ LC+ V A +F M K V + TYN +I G+
Sbjct: 224 NLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGY 283
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+G+ E+ R+L+E+ A G PD T+ L+ L GR +A +FD+M KG P+
Sbjct: 284 LSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNV 343
Query: 338 NAYNAVISNYISVGDF-----------------------------------DECMKYYKG 362
Y +I Y + G DE M +
Sbjct: 344 AIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNK 403
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M P++ Y LI L K +V DA+ F +M++ G+ P+ S + LC+
Sbjct: 404 MKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG---KCGMLLDLWHEMQESGYPSDGEI 479
A Y + G + + + +L L G K L+DL M+ G
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL---MERVGTRPGVIS 520
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y +I G C +G+++ A ++ L G P Y+ L + + +++ AY +FR++
Sbjct: 521 YTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREM 579
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 172/395 (43%), Gaps = 5/395 (1%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNVA Y +++ + M ++L+ M + G++PD +I+ ++ + + +
Sbjct: 341 PNVA----IYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDE 396
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVIS 275
A+ + +++ GL D + ++ LC+ V A FN M + V N+ +N ++
Sbjct: 397 AMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVY 456
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G + + + + E++ +G PD + F+ ++ L G++ A + D M+ G P
Sbjct: 457 GLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRP 516
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+Y +I + VG DE K M S +P+ TY L+ G ++ ++ DA VF
Sbjct: 517 GVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVF 576
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
EML GI P T ++ L L + A +Y G + ++ Y ++L LS
Sbjct: 577 REMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKN 636
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
L+ + + + + +I L G+ E+A+ + G P Y
Sbjct: 637 NCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTY 696
Query: 516 SKLSNKLLASNKLESAYNLFRKIKIARQNDYARRL 550
++ L+ LE +LF ++ + +R L
Sbjct: 697 CLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRML 731
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 183/423 (43%), Gaps = 16/423 (3%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKAL----GRRKFF---DFMC 183
V+G G+L + + F+ + H A V ++N ++ A+ GRR + +
Sbjct: 18 VIGSRARSGSLGLDDALKLFDGLLTHARPAS-VIAFNHLLTAVSRVSGRRSSTTESELVV 76
Query: 184 NVLSDMAKE---GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVL 240
++ + M +E V PD T SI++ F R G++ G + G + + +N +L
Sbjct: 77 SLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLL 136
Query: 241 WCLCQRLHVGAASSLFNSMKGKV--LFNVMTYNIVISGWS---KLGQVVEMERVLKEIVA 295
LC + A + ++ +V++YN ++ G+ + + +E+ ++ +
Sbjct: 137 KGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQG 196
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
P+ ++++ +I G G++D A +F M ++G P+ Y VI D
Sbjct: 197 RSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDR 256
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
++ M +P+ DTY LI G L K + + + EEM G+ P T S L
Sbjct: 257 AEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLN 316
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
LC+ G A ++ + G K ++ Y +L+ + G + DL + M E+G
Sbjct: 317 YLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSP 376
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
D I+ + ++ A+ + + ++G P + Y L + L +++ A F
Sbjct: 377 DHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKF 436
Query: 536 RKI 538
++
Sbjct: 437 NQM 439
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 174/409 (42%), Gaps = 12/409 (2%)
Query: 98 PEERLRGVFLQKLKGKGVIEDA--LWNVNVDLSL-------DVVGKVVNRGNLSGEAMVL 148
P + G+ + KG + + L N+ V+ L +++ + + EAM +
Sbjct: 341 PNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHI 400
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F +K ++ DV +Y ++ AL + D + M EGV P++ + ++
Sbjct: 401 FNK--MKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGL 458
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNV 267
+ KA + + + G++ D N +L LC + V A L + M + V
Sbjct: 459 CTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGV 518
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
++Y +I G +G++ E + L +++ G PD T++ L+ G RAGRIDDA VF
Sbjct: 519 ISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFRE 578
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M G P Y+ ++ + F E + Y M + + N+ Y +++GL K+
Sbjct: 579 MLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNC 638
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
V +A ++F+ + + T + L G AM ++ G + Y L
Sbjct: 639 VDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCL 698
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
+ L G DL+ M++SG + + ++ L + G + A
Sbjct: 699 IAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRA 747
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 154/375 (41%), Gaps = 47/375 (12%)
Query: 92 VDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSG-------- 143
V+ L P+ + + K +I++A+ N + VVN G L
Sbjct: 370 VENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRV 429
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+ VL FN + + VA ++ +N +V L ++ +M +G+ PD+ +
Sbjct: 430 DDAVLKFN-QMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNT 488
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVL--WCLCQRLHVGAASSLFNSMKG 261
++ + GQV KA +++ +E G + S ++ CL R+ AA SL +
Sbjct: 489 ILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRID-EAAKSLDVMLSV 547
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR---- 317
+ + TYN ++ G+ + G++ + V +E++ G +P +T+S ++ GL R
Sbjct: 548 GLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEA 607
Query: 318 -------------------------------IDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
+D+A ++F ++ K + +N +I
Sbjct: 608 KELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGA 667
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
G ++ M + +SSY P++ TY + L++ + + ++F M G P+
Sbjct: 668 LFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPN 727
Query: 407 TGTITSFLEPLCSYG 421
+ + + + L G
Sbjct: 728 SRMLNALVRRLLHRG 742
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 176/383 (45%), Gaps = 5/383 (1%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV +Y+ I+ AL + + D VL+ M K GV P+ T + ++ + +GQ +
Sbjct: 232 PNVV----TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKE 287
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVIS 275
AI L ++ G++ D + N ++ LC+ A +F+SM + L + TY ++
Sbjct: 288 AIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQ 347
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G++ G +VEM +L +V G P+ FS LI + G++D A+ VF M+++G P
Sbjct: 348 GYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNP 407
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
DT Y VI G ++ M+Y++ M P Y LI L K A E+
Sbjct: 408 DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELI 467
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
EMLDRGI T S ++ C G + ++ ++G K + Y L+
Sbjct: 468 LEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLA 527
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
GK L M G D Y +I G C I ++E+A+++ E G P + Y
Sbjct: 528 GKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITY 587
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
+ + L + + +A L+ I
Sbjct: 588 NIILQGLFQTRRTAAAKELYVGI 610
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 164/369 (44%), Gaps = 13/369 (3%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
++ +Y +++ + M +L M + G++P+ SI++ ++ + G+V +A+ +
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------KGKVLFNVMTYNIVI- 274
++ GL D + V+ LC+ V A F M G +++N + +++ I
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
W K +++ E++ G D++ F+ +I+ + GR+ ++ ++FD M G
Sbjct: 458 DKWDKAKELI------LEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 511
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD Y+ +I Y G DE K M S +P+ TY LI+G K ++ DAL +
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F EM G+ P T L+ L AA +Y + G +L L+ Y ++L L
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
L ++ + + + + +I L +G+ + A + G P
Sbjct: 632 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 691
Query: 515 YSKLSNKLL 523
YS ++ L+
Sbjct: 692 YSLMAENLI 700
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 140/302 (46%), Gaps = 4/302 (1%)
Query: 241 WCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE-MERVLKEIVAEGFS 299
C RL +G A+ L N +K + + + + ++ G + + M+ VL+ + G
Sbjct: 101 CCCAGRLDLGFAA-LGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCI 159
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG--CGPDTNAYNAVISNYISVGDFDECM 357
P+ +++ L++GL R +A+E+ M + G C PD +Y VI+ + GD D+
Sbjct: 160 PNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
Y M PN+ TY+ +I+ L K++ + A+EV M+ G++P+ T S +
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
CS G P A+ KK G + + Y L+ L G+C ++ M + G +
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
Y ++ G G L +++ +R G P+ V+S L K++ A +F K
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSK 399
Query: 538 IK 539
++
Sbjct: 400 MR 401
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 153/337 (45%), Gaps = 5/337 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HPN +++++ A ++ D V S M ++G+NPD T V+ ++G+V
Sbjct: 371 HPNH----YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
A++ ++ D L N ++ LC A L M + + + + +N +I
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
K G+V+E E++ +V G PD +T+S LI+G AG++D+A ++ +M G
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN +I+ Y + ++ + ++ M S P++ TY ++ GL ++R+ A A E+
Sbjct: 547 PDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 606
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ + + G T L LC A+ M++ +L + +++ L
Sbjct: 607 YVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 666
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
G+ DL+ + +G D Y + L G
Sbjct: 667 VGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 703
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 158/360 (43%), Gaps = 13/360 (3%)
Query: 189 MAKEG---VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
MA+ G V P+L T I+M S AG++ LG + G DA + +L LC
Sbjct: 79 MARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCA 138
Query: 246 RLHVGAASSLF--NSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG--FSPD 301
A + + + NV +YNI++ G + E +L+ + +G PD
Sbjct: 139 DKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPD 198
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
++++ +I G + G +D A + M ++G P+ Y+++I+ D+ M+
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M PN TY ++ G S + +A+ ++M G+ P T S ++ LC G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGE 478
A M+ K G K +T Y LL+ G+ G L++ L M +G +
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQ---GYATKGALVEMHGLLDLMVRNGIHPNHY 375
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++ +I G+++ A+LV + ++G P + Y + L S ++E A F ++
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 93/199 (46%), Gaps = 1/199 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN ++ + + + +M GV+PD+ T +I++ + + A ++
Sbjct: 548 DCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 607
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
+ + G + + + N++L LC+ A +F ++ + T+NI+I K+
Sbjct: 608 VGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKV 667
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ E + + + A G PD T+S + E L G +++ ++F +M+E GC ++
Sbjct: 668 GRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRML 727
Query: 341 NAVISNYISVGDFDECMKY 359
N+++ + GD Y
Sbjct: 728 NSIVRKLLQRGDITRAGTY 746
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 186/399 (46%), Gaps = 4/399 (1%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
RG + +A+ +F + + H + V +Y++++ A + + +L +M +G PD
Sbjct: 175 RGRVP-DALAVFDD--MLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPD 231
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ T ++++++ G V +A+ +L L G K DA + VL LC LF
Sbjct: 232 IVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFA 291
Query: 258 SM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
M K + +T+N +++ + G V +V+ + G PD +T+S +++GL G
Sbjct: 292 EMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVG 351
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
R+DDA+E+ +K GC PDT AY V+ S+ ++ + M +C P+ T+
Sbjct: 352 RVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFN 411
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+I+ L + V A++V E+M + G P T S ++ LC+ AM + +
Sbjct: 412 TVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSY 471
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
GCK + + LL+ L + L M S P D + VI LC G L A
Sbjct: 472 GCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQA 531
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ ++ G P++ Y+ + + LL + K + A L
Sbjct: 532 IETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLL 570
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 168/353 (47%), Gaps = 8/353 (2%)
Query: 190 AKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF--DAESLNVVLWCLCQRL 247
A G + + T + +++ + RAG++ A +++ G+ F D + N ++ LC R
Sbjct: 122 ATLGASATVVTYNTMVNGYCRAGRIEDARRLIS-----GMPFPPDTFTFNPLIRALCVRG 176
Query: 248 HVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
V A ++F+ M + +V+TY+I++ K + +L E+ A+G PD +T++
Sbjct: 177 RVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYN 236
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
LI + G +D+A+ + + GC PD Y V+ + + E + + M+S
Sbjct: 237 VLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASN 296
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
C P+ T+ +++ L + V A++V + M + G +P T +S L+ LC G A
Sbjct: 297 KCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDA 356
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ + + + GCK AY +L+ L + +L EM S P D + VIA
Sbjct: 357 VELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIAS 416
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
LC G ++ A+ V+E+ G P + Y+ + + L ++ A L ++
Sbjct: 417 LCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQ 469
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 163/360 (45%), Gaps = 3/360 (0%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A D ++N IV +L ++ D V+ M++ G PD+ T S ++D G+V A++
Sbjct: 299 APDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVE 358
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWS 278
+L RL+ +G K D + VL LC A L M + +T+N VI+
Sbjct: 359 LLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLC 418
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
+ G V +V++++ G +PD +T++ +I+GL IDDA+E+ ++ GC PD
Sbjct: 419 QKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIV 478
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
+N ++ SV +++ + M +C P+ T+ +I+ L + + A+E + M
Sbjct: 479 TFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIM 538
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+ G +P+ T ++ L G A+ + L Y ++ ++ GK
Sbjct: 539 AENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKM 596
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
LDL M +G D Y + G+C + A+ ++ G P Y+ +
Sbjct: 597 EEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDI 656
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 167/359 (46%), Gaps = 20/359 (5%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +Y ++K L + ++ ++++M PD T + V+ S + G V +AI+++
Sbjct: 371 DTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVV 430
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKL 280
++ + G D + N ++ LC + A L ++++ +++T+N ++ G +
Sbjct: 431 EQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSV 490
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ + E+++ ++ PD+ TF+ +I L + G + AIE M E GC P+ + Y
Sbjct: 491 DRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTY 550
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N V+ + G E +K GM+ N P++ TY +IS + K+ K+ +AL++ M+
Sbjct: 551 NIVVDALLKAGKTQEALKLLSGMT--NGTPDLITYNTVISNITKAGKMEEALDLLRVMVS 608
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ P T T S +C A+ M + + +G T Y +L + +
Sbjct: 609 NGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDI 668
Query: 461 LLDLWHEMQESGYPSDGEIY----------------EYVIAGLCNIGQLENAVLVMEES 503
+D + M SG D Y + ++ LC++G L+ + L+ EES
Sbjct: 669 AIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGVLDKS-LIEEES 726
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 62/168 (36%), Gaps = 34/168 (20%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N D+ +YN ++ + + + ++L M G++PD T + R +A
Sbjct: 575 NGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRA 634
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGW 277
I+ML RL+D GL DA N +L CQ A F M
Sbjct: 635 IRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHM------------------ 676
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
V+ G PD T+ L+E L +D+A ++
Sbjct: 677 ----------------VSSGCMPDESTYIILLEALAYECLLDEAKQLL 708
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 177/379 (46%), Gaps = 2/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y IV L + K ++ + G P + T + +++ + G++ +AI +L
Sbjct: 33 DIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL 92
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
++ D G D + ++ L ++ A LF M + L + + Y +I G +
Sbjct: 93 RKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQA 152
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ + V K + ++G PD +T S +I+GL +AGRI A+ +F +M+ +G P+ Y
Sbjct: 153 GKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVY 212
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+A+I D ++ M C P+ TY LI GL KS VA A F+EML+
Sbjct: 213 SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLE 272
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G P T + C G AA ++ C ++ Y L+ L +
Sbjct: 273 AGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTK 332
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ M+E G P D +Y ++ GLC G+LE ++ +E R G S+ ++L
Sbjct: 333 ASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQ-TRTRLIF 391
Query: 521 KLLASNKLESAYNLFRKIK 539
L +N+++ A +LF I+
Sbjct: 392 HLCKANRVDEAVSLFNAIR 410
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 169/342 (49%), Gaps = 3/342 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y ++ LG++K + +MA G+ D + ++ ++AG++ +A +
Sbjct: 103 DVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVY 162
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
+ G D +L+ ++ LC+ +GAA +F SM+ + L N + Y+ +I G K
Sbjct: 163 KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 222
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
++ +L ++ +PD++T++ LI+GL ++G + A FD M E GC PD Y
Sbjct: 223 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTY 282
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +IS + G+ D + MSS C PN+ TY LISGL K R++ A ++ M +
Sbjct: 283 NILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKE 342
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
RG P + +S ++ LC G M++ + + G S T +L+ L +
Sbjct: 343 RGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIF-HLCKANRVDE 401
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
+ L++ +++ G P Y +I+ L G++ V +E
Sbjct: 402 AVSLFNAIRKEGMPHP-YAYNSIISALIKSGKVNEGQAVYQE 442
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 134/295 (45%), Gaps = 4/295 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA LF A + +A D Y +++ L + +V M +G PD+ TLS
Sbjct: 122 EAYKLFKEMASR--GLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 179
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++D +AG++ A+++ +E GL + + ++ LC+ + A + MK
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 239
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ +TYNI+I G K G V E++ G PD T++ LI G +AG D A
Sbjct: 240 CTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAC 299
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
VFD M C P+ Y +IS + YY+ M C P+ Y+ L+ GL
Sbjct: 300 GVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGL 359
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
KS K+ +F+EM +R V ++ T T + LC A+ ++ RK G
Sbjct: 360 CKSGKLEGGCMLFDEM-ERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG 413
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 133/278 (47%)
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
++ TY ++ +K ++ E ++++I A G +P T++ L+ GL + GR+++AI++
Sbjct: 32 IDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDL 91
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
+ + GC PD Y ++I E K +K M+S + YT LI GLL+
Sbjct: 92 LRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQ 151
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+ K+ A V++ M +G VP T+++ ++ LC G AA+ ++K G +
Sbjct: 152 AGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVV 211
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y L+ L K L++ +M+++ D Y +I GLC G + A +E L
Sbjct: 212 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEML 271
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
G P Y+ L + + ++A +F + +R
Sbjct: 272 EAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSR 309
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%)
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
TFS LI GL +AG + A + GC D + Y ++ E + + +
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
++ C P + TY L++GL K ++ +A+++ +++D G P T TS ++ L
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A ++K+ G L Y L+R L GK ++ M G D +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
I GLC G++ AV + + +G P+ +VYS L + L + K++ A + ++K A
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 238
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 177/354 (50%), Gaps = 1/354 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + + + SIV+DS + G A+ + +E G+K D + + ++ LC
Sbjct: 265 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 324
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ + M G+ ++ +V+T++ +I + K G+++E + + E++ G +PD++T++
Sbjct: 325 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 384
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI+G + + +A ++FD M KGC PD Y+ +I++Y D+ M+ ++ +SS
Sbjct: 385 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 444
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
PN TY L+ G +S K+ A E+F+EM+ RG+ PS T L+ LC G + A+
Sbjct: 445 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 504
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+++K +K L + Y +++ + K L+ + + G D Y +I GL
Sbjct: 505 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 564
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
C G L A ++ + G P Y+ L L + L S+ L ++K+
Sbjct: 565 CKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 618
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 187/413 (45%), Gaps = 36/413 (8%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
+N + A+ R K +D + M G+ D+ T++I+++ + R ++ A +LGR
Sbjct: 102 FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAW 161
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVV 284
G + D + + ++ C V A +L + M + K +++T + +I+G G+V
Sbjct: 162 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 221
Query: 285 EMERVLKEIVAEGFSPDSLT-----------------------------------FSFLI 309
E ++ +V GF PD +T +S +I
Sbjct: 222 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 281
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
+ L + G DDA+ +F+ M+ KG D Y+++I + G +D+ K + M N
Sbjct: 282 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 341
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P++ T++ LI +K K+ +A E++ EM+ RGI P T T S ++ C H A M
Sbjct: 342 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 401
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ GC+ + Y +L+ + + L+ E+ G + Y ++ G C
Sbjct: 402 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 461
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
G+L A + +E + +G PS + Y L + L + +L A +F K++ +R
Sbjct: 462 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 514
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 205/465 (44%), Gaps = 71/465 (15%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+VL F ++ + D+ + +++ R+K F +VL K G PD T S ++
Sbjct: 117 LVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLV 176
Query: 206 DSFIRAGQVYKAIQ-----------------------------------MLGRLEDFGLK 230
+ F G+V +A+ ++ R+ ++G +
Sbjct: 177 NGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQ 236
Query: 231 FDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV----- 284
D + VL LC+ + A LF M+ + + +V+ Y+IVI K G
Sbjct: 237 PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSL 296
Query: 285 --EME----------------------------RVLKEIVAEGFSPDSLTFSFLIEGLGR 314
EME ++L+E++ PD +TFS LI+ +
Sbjct: 297 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 356
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G++ +A E+++ M +G PDT YN++I + E + + M S CEP++ T
Sbjct: 357 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 416
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y+ LI+ K+++V D + +F E+ +G++P+T T + + C G +AA ++++
Sbjct: 417 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 476
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G S+ Y +LL L G+ L+++ +MQ+S IY +I G+CN +++
Sbjct: 477 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 536
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+A + KG P + Y+ + L L A LFRK+K
Sbjct: 537 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 581
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 175/344 (50%), Gaps = 7/344 (2%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF +K + DV +Y+ ++ L +D +L +M + PD+ T S
Sbjct: 292 DALSLFNEMEMK--GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 349
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
++D F++ G++ +A ++ + G+ D + N ++ C+ + A+ +F+ M K
Sbjct: 350 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 409
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+++TY+I+I+ + K +V + R+ +EI ++G P+++T++ L+ G ++G+++ A
Sbjct: 410 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 469
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
E+F M +G P Y ++ G+ ++ ++ ++ M + Y +I G+
Sbjct: 470 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 529
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+ KV DA +F + D+G+ P T + LC G A M+++K ++ GC
Sbjct: 530 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 589
Query: 443 TAYKLLLRRLSGFGKCGML--LDLWHEMQESGYPSDGEIYEYVI 484
Y +L+R + G G++ ++L EM+ G+ +D + VI
Sbjct: 590 FTYNILIR--AHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 631
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 1/293 (0%)
Query: 247 LHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
+ V A LF SM + + L + +N + S ++ Q + K + G D T
Sbjct: 78 IKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTM 137
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ +I R ++ A V + G PDT ++ +++ + G E + M
Sbjct: 138 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 197
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
P++ T + LI+GL +V++AL + + M++ G P T L LC G
Sbjct: 198 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 257
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ +++K + K S+ Y +++ L G L L++EM+ G +D Y +I
Sbjct: 258 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 317
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GLCN G+ ++ ++ E + + P + +S L + + KL A L+ ++
Sbjct: 318 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 370
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 91/223 (40%), Gaps = 35/223 (15%)
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
+++DAI++F++M + P +N + S +D + + KGM E +M T T
Sbjct: 79 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+I+ + +K+ A V G P T T ++ + C G A+
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVA-------- 190
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
L+D EM++ D +I GLC G++ A
Sbjct: 191 ------------------------LVDRMVEMKQR---PDLVTVSTLINGLCLKGRVSEA 223
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+++++ + GF P + Y + N+L S A +LFRK++
Sbjct: 224 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKME 266
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 184/385 (47%), Gaps = 5/385 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PNV +YN IV + + ++L M + V D+ T S ++DS R G +
Sbjct: 167 QPNVV----TYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCID 222
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVI 274
AI + +E G+K + N ++ LC+ L M K++ NV+T+N++I
Sbjct: 223 AAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLI 282
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+ K G++ E + KE++ +G SP+++T++ L++G R+ +A + D M C
Sbjct: 283 DVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCS 342
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD + ++I Y V DE MK ++ +S N TY+ L+ G +S K+ A E+
Sbjct: 343 PDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEEL 402
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F+EM+ G++P T L+ LC G A+ +++ +K L + Y +++ +
Sbjct: 403 FQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCK 462
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK +L+ + G + Y +I+GLC G L A +++ + G P+
Sbjct: 463 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCT 522
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
Y+ L L L ++ L ++K
Sbjct: 523 YNTLIRAHLRDGDLTASAKLIEEMK 547
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 175/369 (47%), Gaps = 1/369 (0%)
Query: 177 KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESL 236
K F+ + + M G+ ++ TL+I+++ F R + A +LG++ G + D +
Sbjct: 79 KQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTF 138
Query: 237 NVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
N ++ LC V A L M + NV+TYN +++G K G +L+++
Sbjct: 139 NTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDE 198
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
D T+S +I+ L R G ID AI +F M+ KG YN+++ G +++
Sbjct: 199 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWND 258
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
++ K M+S PN+ T+ LI +K K+ +A E+++EM+ +GI P+T T S ++
Sbjct: 259 GVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMD 318
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
C A M + C + + L++ + + L+ ++ + G +
Sbjct: 319 GYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVA 378
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ Y ++ G C G+LE A + +E + G P + Y L + L + KLE A +F
Sbjct: 379 NTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIF 438
Query: 536 RKIKIARQN 544
++ ++ N
Sbjct: 439 EDLQKSKMN 447
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 158/321 (49%), Gaps = 1/321 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN +V L + ++ +L DM + P++ T ++++D F++ G++ +A ++ +
Sbjct: 242 TYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEM 301
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
G+ + + N ++ C + + A+++ + M + +++T+ +I G+ K+ +V
Sbjct: 302 ITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRV 361
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E ++ ++I G +++T+S L++G ++G+++ A E+F M G PD Y +
Sbjct: 362 DEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGIL 421
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ G ++ ++ ++ + ++ YT +I G+ K KV DA +F + +G+
Sbjct: 422 LDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGV 481
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T T + LC G A ++ +K + G + + Y L+R G
Sbjct: 482 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAK 541
Query: 464 LWHEMQESGYPSDGEIYEYVI 484
L EM+ G+ +D + VI
Sbjct: 542 LIEEMKSCGFSADASSIKMVI 562
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 142/296 (47%), Gaps = 1/296 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +V ++NV++ + + +M +G++P+ T + +MD + ++ +A
Sbjct: 271 IIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEAN 330
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
ML + D + ++ C+ V LF + K ++ N +TY+I++ G+
Sbjct: 331 NMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGF 390
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G++ E + +E+V+ G PD +T+ L++GL G+++ A+E+F+ +++ D
Sbjct: 391 CQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDI 450
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +I G ++ + + +PN+ TYT +ISGL K +++A + +
Sbjct: 451 VMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 510
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
M + G P+ T + + G A+ + ++ + G ++ K+++ LS
Sbjct: 511 MEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLS 566
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 122/262 (46%), Gaps = 1/262 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ + +YN ++ + N+L M + +PD+ T + ++ + + +V + +
Sbjct: 306 ISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGM 365
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGW 277
++ ++ GL + + ++++ CQ + A LF M VL +VMTY I++ G
Sbjct: 366 KLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGL 425
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
G++ + + +++ + D + ++ +IEG+ + G+++DA +F ++ KG P+
Sbjct: 426 CDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 485
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +IS G E + M EPN TY LI L+ + + ++ EE
Sbjct: 486 MTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEE 545
Query: 398 MLDRGIVPSTGTITSFLEPLCS 419
M G +I ++ L S
Sbjct: 546 MKSCGFSADASSIKMVIDMLSS 567
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 131/302 (43%), Gaps = 8/302 (2%)
Query: 242 CLCQRLHVGA-------ASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
C +RL G A LF M + + L +++ ++ SG + Q + K++
Sbjct: 32 CYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKM 91
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
G + + T + +I R + A V + + G PDT +N +I+
Sbjct: 92 ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKV 151
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
E + M C+PN+ TY +++G+ KS + AL++ +M +R + T ++
Sbjct: 152 SEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTI 211
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
++ LC G AA+ ++K+ G K SL Y L+ L GK + L +M
Sbjct: 212 IDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKI 271
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
+ + +I G+L+ A + +E + KG P+ + Y+ L + N+L A N
Sbjct: 272 IPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANN 331
Query: 534 LF 535
+
Sbjct: 332 ML 333
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 103/255 (40%), Gaps = 35/255 (13%)
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS-------------S 365
DDAI++F M P ++ S S F+ + + K M
Sbjct: 47 DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106
Query: 366 YNC----------------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
NC EP+ T+ LI+GL KV++A+ + M++ G
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T S + +C G A+ + +K + K + Y ++ L G +
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAIS 226
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L+ EM+ G S Y ++ GLC G+ + V ++++ + P+ + ++ L + +
Sbjct: 227 LFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFV 286
Query: 524 ASNKLESAYNLFRKI 538
KL+ A L++++
Sbjct: 287 KEGKLQEANELYKEM 301
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 79/186 (42%)
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
D+ + ++ M P++ ++R SG+ +++ L+ ++M GI + T+
Sbjct: 47 DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
+ C A + K K+G + T + L+ L K + L M E+G
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
+ Y ++ G+C G A+ ++ + + YS + + L +++A +
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAIS 226
Query: 534 LFRKIK 539
LF++++
Sbjct: 227 LFKEME 232
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 198/425 (46%), Gaps = 41/425 (9%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
P+V K V+V R + D + ++ M ++ + D+ + +I++ F ++
Sbjct: 77 PSVVDFCKLMGVVV----RMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPF 132
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVIS 275
A+ G++ GL D + N +L LC V A +LF+ M + NV+T+ +++
Sbjct: 133 ALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMN 192
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG------------------------ 311
G + G++VE +L ++ +G P +T+ +++G
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHII 252
Query: 312 ------------LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
L + GR DA +F M+EKG PD YN++I + S G + + +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ M P++ TY LI+ +K K +A E+++EML RGI+P+T T +S ++ C
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
AA M+ GC +L + L+ G + ++L HEM E+G +D
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y +I G +G L A+ +++E + G CP + L + L + KL+ A +F+ ++
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Query: 540 IARQN 544
++++
Sbjct: 493 KSKKD 497
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 190/431 (44%), Gaps = 47/431 (10%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
++ +V Y+ I+ +L + N+ ++M ++G+ PDL T + ++ F +G+ A
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDA 309
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
Q+L + + + D + N ++ + A L++ M + ++ N +TY+ +I G
Sbjct: 310 EQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG 369
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K ++ E + + +G SP+ +TF+ LI+G A RIDD +E+ M E G D
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGM-SSYNC--------------------------- 368
T YN +I + VGD + + + M SS C
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489
Query: 369 ------------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
EP++ TY LISGL+ K +A E++EEM RGIVP T T
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+S ++ LC A M+ ++ + L+ G+ L+L+ EM
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G ++ Y +I G +G + A+ + +E + G P + + L + +L+
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669
Query: 531 AYNLFRKIKIA 541
A + K++++
Sbjct: 670 AVAMLEKLQMS 680
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 198/425 (46%), Gaps = 41/425 (9%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
P+V K V+V R + D + ++ M ++ + D+ + +I++ F ++
Sbjct: 77 PSVVDFCKLMGVVV----RMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPF 132
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVIS 275
A+ G++ GL D + N +L LC V A +LF+ M + NV+T+ +++
Sbjct: 133 ALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMN 192
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG------------------------ 311
G + G++VE +L ++ +G P +T+ +++G
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252
Query: 312 ------------LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
L + GR DA +F M+EKG PD YN++I + S G + + +
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ M P++ TY LI+ +K K +A E+++EML RGI+P+T T +S ++ C
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
AA M+ GC +L + L+ G + ++L HEM E+G +D
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y +I G +G L A+ +++E + G CP + L + L + KL+ A +F+ ++
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Query: 540 IARQN 544
++++
Sbjct: 493 KSKKD 497
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 190/431 (44%), Gaps = 47/431 (10%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
++ +V Y+ I+ +L + N+ ++M ++G+ PDL T + ++ F +G+ A
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDA 309
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
Q+L + + + D + N ++ + A L++ M + ++ N +TY+ +I G
Sbjct: 310 EQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG 369
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K ++ E + + +G SP+ +TF+ LI+G A RIDD +E+ M E G D
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGM-SSYNC--------------------------- 368
T YN +I + VGD + + + M SS C
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489
Query: 369 ------------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
EP++ TY LISGL+ K +A E++EEM RGIVP T T
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+S ++ LC A M+ ++ + L+ G+ L+L+ EM
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G ++ Y +I G +G + A+ + +E + G P + + L + +L+
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669
Query: 531 AYNLFRKIKIA 541
A + K++++
Sbjct: 670 AVAMLEKLQMS 680
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 206/444 (46%), Gaps = 15/444 (3%)
Query: 97 LPEERLRGVFLQKLKGKGVIEDAL-WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIK 155
L + R L+ L+G G + D + +NV ++ G ++ VL
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNV-------MISGYCKAGEINNALSVL------D 196
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
+V+ DV +YN I+++L VL M + PD+ T +I++++ R V
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
A+++L + D G D + NV++ +C+ + A N M NV+T+NI++
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ ++ E++L +++ +GFSP +TF+ LI L R G + AI++ + M + GC
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P++ +YN ++ + D ++Y + M S C P++ TY +++ L K KV DA+E+
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
++ +G P T + ++ L G A+ + + R K Y L+ LS
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK + +HE + G + + ++ GLC Q + A+ + + +G P+
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETS 556
Query: 515 YSKLSNKLLASNKLESAYNLFRKI 538
Y+ L L + A L ++
Sbjct: 557 YTILIEGLAYEGMAKEALELLNEL 580
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 169/354 (47%), Gaps = 2/354 (0%)
Query: 186 LSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
L +M G PD+ + ++ F R G+ KA ++L LE G D + NV++ C+
Sbjct: 125 LENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCK 184
Query: 246 RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
+ A S+ + M V +V+TYN ++ G++ + VL ++ PD +T+
Sbjct: 185 AGEINNALSVLDRMS--VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITY 242
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LIE R + A+++ D M+++GC PD YN +++ G DE +K+ M S
Sbjct: 243 TILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
C+PN+ T+ ++ + + + DA ++ +ML +G PS T + LC G
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ + +K + GC+ + +Y LL K ++ M G D Y ++
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
LC G++E+AV ++ + KG P + Y+ + + L + K A L +++
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 181/423 (42%), Gaps = 40/423 (9%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F + H NV D+ +++ R +L + G PD+ T ++++ +
Sbjct: 124 FLENMVYHGNVP-DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGY 182
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NV 267
+AG++ A+ +L R+ + D + N +L LC + A + + M + + +V
Sbjct: 183 CKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 239
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TY I+I + V ++L E+ G +PD +T++ L+ G+ + GR+D+AI+ +
Sbjct: 240 ITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND 299
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDE---------------------------CMKYY 360
M GC P+ +N ++ + S G + + C K
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGL 359
Query: 361 KG--------MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
G M + C+PN +Y L+ G K +K+ A+E E M+ RG P T +
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
L LC G A+ + + GC L Y ++ L+ GK G + L EM+
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
D Y ++ GL G+++ A+ E R G P+ + ++ + L S + + A
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAI 539
Query: 533 NLF 535
+
Sbjct: 540 DFL 542
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 126/243 (51%), Gaps = 1/243 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V ++N+++ L R+ ++L M + G P+ + + ++ F + ++ +AI+ L
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM-TYNIVISGWSKLG 281
R+ G D + N +L LC+ V A + N + K V+ TYN VI G +K G
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ + ++L E+ A+ PD++T+S L+ GL R G++D+AI+ F + G P+ +N
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFN 523
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+++ D + + M + C+PN +YT LI GL +ALE+ E+ ++
Sbjct: 524 SIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583
Query: 402 GIV 404
G++
Sbjct: 584 GLM 586
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 121/260 (46%), Gaps = 3/260 (1%)
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
+ G++ E + L+ +V G PD + + LI G R G+ A ++ + ++ G PD
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
YN +IS Y G+ + + MS P++ TY ++ L S K+ A+EV + M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
L R P T T +E C AM + + R GC + Y +L+ + G+
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+ ++M SG + + ++ +C+ G+ +A ++ + LRKGF PS + ++ L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 519 SNKLLASNKLESAYNLFRKI 538
N L L A ++ K+
Sbjct: 351 INFLCRKGLLGRAIDILEKM 370
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 177/354 (50%), Gaps = 1/354 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + + + SIV+DS + G A+ + +E G+K D + + ++ LC
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ + M G+ ++ +V+T++ +I + K G+++E + + E++ G +PD++T++
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI+G + + +A ++FD M KGC PD Y+ +I++Y D+ M+ ++ +SS
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
PN TY L+ G +S K+ A E+F+EM+ RG+ PS T L+ LC G + A+
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+++K +K L + Y +++ + K L+ + + G D Y +I GL
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 535
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
C G L A ++ + G P Y+ L L + L S+ L ++K+
Sbjct: 536 CKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 589
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 187/413 (45%), Gaps = 36/413 (8%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
+N + A+ R K +D + M G+ D+ T++I+++ + R ++ A +LGR
Sbjct: 73 FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAW 132
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVV 284
G + D + + ++ C V A +L + M + K +++T + +I+G G+V
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 285 EMERVLKEIVAEGFSPDSLT-----------------------------------FSFLI 309
E ++ +V GF PD +T +S +I
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
+ L + G DDA+ +F+ M+ KG D Y+++I + G +D+ K + M N
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P++ T++ LI +K K+ +A E++ EM+ RGI P T T S ++ C H A M
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ GC+ + Y +L+ + + L+ E+ G + Y ++ G C
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
G+L A + +E + +G PS + Y L + L + +L A +F K++ +R
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 205/465 (44%), Gaps = 71/465 (15%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+VL F ++ + D+ + +++ R+K F +VL K G PD T S ++
Sbjct: 88 LVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLV 147
Query: 206 DSFIRAGQVYKAIQ-----------------------------------MLGRLEDFGLK 230
+ F G+V +A+ ++ R+ ++G +
Sbjct: 148 NGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQ 207
Query: 231 FDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV----- 284
D + VL LC+ + A LF M+ + + +V+ Y+IVI K G
Sbjct: 208 PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSL 267
Query: 285 --EME----------------------------RVLKEIVAEGFSPDSLTFSFLIEGLGR 314
EME ++L+E++ PD +TFS LI+ +
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G++ +A E+++ M +G PDT YN++I + E + + M S CEP++ T
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y+ LI+ K+++V D + +F E+ +G++P+T T + + C G +AA ++++
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G S+ Y +LL L G+ L+++ +MQ+S IY +I G+CN +++
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+A + KG P + Y+ + L L A LFRK+K
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 175/344 (50%), Gaps = 7/344 (2%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF +K + DV +Y+ ++ L +D +L +M + PD+ T S
Sbjct: 263 DALSLFNEMEMK--GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
++D F++ G++ +A ++ + G+ D + N ++ C+ + A+ +F+ M K
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+++TY+I+I+ + K +V + R+ +EI ++G P+++T++ L+ G ++G+++ A
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
E+F M +G P Y ++ G+ ++ ++ ++ M + Y +I G+
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+ KV DA +F + D+G+ P T + LC G A M+++K ++ GC
Sbjct: 501 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560
Query: 443 TAYKLLLRRLSGFGKCGML--LDLWHEMQESGYPSDGEIYEYVI 484
Y +L+R + G G++ ++L EM+ G+ +D + VI
Sbjct: 561 FTYNILIR--AHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 1/293 (0%)
Query: 247 LHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
+ V A LF SM + + L + +N + S ++ Q + K + G D T
Sbjct: 49 IKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTM 108
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ +I R ++ A V + G PDT ++ +++ + G E + M
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
P++ T + LI+GL +V++AL + + M++ G P T L LC G
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ +++K + K S+ Y +++ L G L L++EM+ G +D Y +I
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GLCN G+ ++ ++ E + + P + +S L + + KL A L+ ++
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 91/223 (40%), Gaps = 35/223 (15%)
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
+++DAI++F++M + P +N + S +D + + KGM E +M T T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+I+ + +K+ A V G P T T ++ + C G A+
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVA-------- 161
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
L+D EM++ D +I GLC G++ A
Sbjct: 162 ------------------------LVDRMVEMKQR---PDLVTVSTLINGLCLKGRVSEA 194
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+++++ + GF P + Y + N+L S A +LFRK++
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKME 237
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 190/411 (46%), Gaps = 2/411 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L + + ++S D+V +V+ R + FF WA + P SY+++V LG
Sbjct: 68 LEVGLSSFSSNVSTDLVEQVLKRCKNIAFSAHRFFLWAKRIPGFEPSDDSYHIVVDILGS 127
Query: 176 RKFFDFMCNVLSDMAKEGVNP-DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
F + + L ++ + + E V ++ RA AI+ R+ +FG++ +
Sbjct: 128 SGQFAILWDFLIEIRETRSSVITHELFWHVFTAYSRADLPQDAIRAFNRMGEFGIRAGVD 187
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
L+ +L+ LC+R HV A F+ +K +V TY+I+ GW +G ++V E+
Sbjct: 188 DLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTYSILTRGWGVVGDSNNAQKVFDEMR 247
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
G D L ++ L+E L + G+ D+A ++F M G PD + Y+ I + D
Sbjct: 248 ERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLH 307
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ + N PN+ TY +I L K + V +A ++ +EM++RG+ P T + +
Sbjct: 308 TVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQ 367
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
C + ++A+ + K+ + C Y ++L+ L G+ ++W M + G+
Sbjct: 368 AYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWESMGKRGFY 427
Query: 475 SDGEIYEYVIAGLCNIG-QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
Y +I G C +LE A E + +G P L ++LL
Sbjct: 428 PSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRDRLLG 478
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 98/240 (40%), Gaps = 2/240 (0%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA-YNAVISNYISVGDFDE 355
GF P ++ +++ LG +G+ + ++E T+ + V + Y +
Sbjct: 110 GFEPSDDSYHIVVDILGSSGQFAILWDFLIEIRETRSSVITHELFWHVFTAYSRADLPQD 169
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
++ + M + +D +L+ L K + VA A + F++ + PS T +
Sbjct: 170 AIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDK-VKSVFNPSVKTYSILTR 228
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
G + A ++ + R+ GC + + AY LL L GK ++ EM +G
Sbjct: 229 GWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDP 288
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
D + Y I C L V+E + RK P+ Y+ + KL +E AY +
Sbjct: 289 DADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQIL 348
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 54/150 (36%), Gaps = 1/150 (0%)
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
DA+ F M + GI + L LC A + K + V S+ Y +L
Sbjct: 169 DAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSV-FNPSVKTYSILT 227
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
R G ++ EM+E G D Y ++ LC G+ + A + E G
Sbjct: 228 RGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVD 287
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P YS N L + Y + + K
Sbjct: 288 PDADTYSIFIRSSCQENDLHTVYRVLERTK 317
>gi|212274591|ref|NP_001130971.1| GTP binding protein [Zea mays]
gi|194690592|gb|ACF79380.1| unknown [Zea mays]
gi|413947420|gb|AFW80069.1| GTP binding protein [Zea mays]
Length = 535
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 184/394 (46%), Gaps = 5/394 (1%)
Query: 119 ALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKF 178
AL V + D++ V+ + + + + FFNWA P A ++Y ++ LGR K
Sbjct: 100 ALHQFAVHMDEDIILMVLQKQRSNWQVALAFFNWAATLPGYAHGSRAYTEMLDILGRMKK 159
Query: 179 FDFMCNVLSDMAKE--GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESL 236
M + ++ +E V + +++++ + A +V +AI++ +D+G + D
Sbjct: 160 VRHMRQLFDEIPEERRQVVVTNKMFAVLLNRYAGAHKVQEAIEVFYLRKDYGFELDLVGF 219
Query: 237 NVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAE 296
++L LC+ HV A +LF K + ++NI+++GW G + + +R+ +I+A
Sbjct: 220 QILLMSLCRYKHVEEAEALFREKKDEFPHVTKSWNIILNGWCVKGSLRDAQRIWNDIIAS 279
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
D TF I L + GRI A+++F M EKG PD N +I E
Sbjct: 280 KVERDLFTFGTFINALAKNGRISAAVKLFKQMWEKGINPDVAICNCIIDQLCFKKKIPEA 339
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
++ + M+ C+ ++ TY LI + K +++ E+ ++M +G P+ T + L+
Sbjct: 340 LEIFGEMNDRLCQADVATYNTLIKYMCKIKRMEKVYELLDDMEAKGCPPNNRTYSYILK- 398
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
+ P + + ++ + GCKL Y L+L + + +W EM+ G D
Sbjct: 399 --TTEKPKDVIALMQRMERTGCKLDSDIYNLILNLYIKWKYEKGMQQIWDEMERRGSGPD 456
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
+ ++ GL + G+L+ A+ +G P
Sbjct: 457 QRSFTIMVHGLHSQGKLDEALQYYTTMKSRGMIP 490
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 154/338 (45%), Gaps = 38/338 (11%)
Query: 97 LPEERLR--------GVFLQKLKGKGVIEDAL----WNVNVDLSLDVVGKVV-----NRG 139
+PEER + V L + G +++A+ + LD+VG + R
Sbjct: 170 IPEERRQVVVTNKMFAVLLNRYAGAHKVQEAIEVFYLRKDYGFELDLVGFQILLMSLCRY 229
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
EA LF + P+V KS+N+I+ + + +D+ V DL
Sbjct: 230 KHVEEAEALFREKKDEFPHV---TKSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLF 286
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
T +++ + G++ A+++ ++ + G+ D N ++ LC + + A +F M
Sbjct: 287 TFGTFINALAKNGRISAAVKLFKQMWEKGINPDVAICNCIIDQLCFKKKIPEALEIFGEM 346
Query: 260 KGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
++ +V TYN +I K+ ++ ++ +L ++ A+G P++ T+S++++ +
Sbjct: 347 NDRLCQADVATYNTLIKYMCKIKRMEKVYELLDDMEAKGCPPNNRTYSYILKTTEKP--- 403
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE-------PN 371
D I + M+ GC D++ YN +++ YI KY KGM E P+
Sbjct: 404 KDVIALMQRMERTGCKLDSDIYNLILNLYIK-------WKYEKGMQQIWDEMERRGSGPD 456
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
++T ++ GL K+ +AL+ + M RG++P T
Sbjct: 457 QRSFTIMVHGLHSQGKLDEALQYYTTMKSRGMIPEPRT 494
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 106/243 (43%), Gaps = 41/243 (16%)
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G K+ + +E+ + K+ GF D + F L+ L R +++A +F K++
Sbjct: 192 AGAHKVQEAIEVFYLRKDY---GFELDLVGFQILLMSLCRYKHVEEAEALFREKKDEF-- 246
Query: 335 PD-TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
P T ++N +++ + G + + + + + E ++ T+ I+ L K+ +++ A++
Sbjct: 247 PHVTKSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTFGTFINALAKNGRISAAVK 306
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+F++M ++GI P ++ LC +KK
Sbjct: 307 LFKQMWEKGINPDVAICNCIIDQLC-----------FKK--------------------- 334
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
K L+++ EM + +D Y +I +C I ++E ++++ KG P+
Sbjct: 335 ---KIPEALEIFGEMNDRLCQADVATYNTLIKYMCKIKRMEKVYELLDDMEAKGCPPNNR 391
Query: 514 VYS 516
YS
Sbjct: 392 TYS 394
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 197/434 (45%), Gaps = 21/434 (4%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
+F+Q L +G ++ A+ N V + + + K+VN G D
Sbjct: 256 IFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGG-------------------FEPDDL 296
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ ++ VL D +G PD T +++ F + G +A+ +
Sbjct: 297 TYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDG 356
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
GL+ N ++ L Q+ + A L N M + L N+ TYN+VI+G K+G V
Sbjct: 357 LGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCV 416
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ ++ + +A+G PD T++ LI+G + ++D A E+ + M +G PD YN +
Sbjct: 417 SDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTL 476
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
++ G +E M+ +K M C PN+ TY ++ L K++KV +A+++ EM +G+
Sbjct: 477 LNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGL 536
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA-YKLLLRRLSGFGKCGMLL 462
P + + C G A ++++ K TA Y +++ S M +
Sbjct: 537 KPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAM 596
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
L+ M+ SG D Y VI G C +G + + E++ K F PS + ++ N L
Sbjct: 597 KLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCL 656
Query: 523 LASNKLESAYNLFR 536
+K+ A +
Sbjct: 657 CVKDKVHEAVGIIH 670
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 169/385 (43%), Gaps = 10/385 (2%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y +V L D + +M + PD+ + ++ + G V+++ ++LG++
Sbjct: 183 AYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKV 242
Query: 225 EDFGLKFDAESLNVVLWCLCQRLH----------VGAASSLFNSMKGKVLFNVMTYNIVI 274
G+ + + N+ + LC+ V A L + G + +TYN +I
Sbjct: 243 LKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSII 302
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ K G V + RVLK+ V +GF PD T+ LI G + G D A+ VF KG
Sbjct: 303 DGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLR 362
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P YN +I G ++ M+ C PN+ TY +I+GL K V+DA +
Sbjct: 363 PSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHL 422
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
++ + +G P T + ++ C +A M + G + Y LL L
Sbjct: 423 VDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCK 482
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK +++++ M+E G + Y ++ LC ++ AV ++ E KG P +
Sbjct: 483 AGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVS 542
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
+ L ++ AY LFR+++
Sbjct: 543 FGTLFTGFCKIGDIDGAYQLFRRME 567
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 182/436 (41%), Gaps = 46/436 (10%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI-VMDS 207
FN A +Y IV+ LG F+ M +LS+M + N LE I M +
Sbjct: 26 MFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIEAMKN 85
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFN 266
+ R G+V +A+ R++ + S N ++ L + + A ++ M+ + V +
Sbjct: 86 YGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSD 145
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V TY I I + K + R+L+ + G +++ + ++ GL +G D A E+FD
Sbjct: 146 VYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFD 205
Query: 327 TMKEKGCGPDTNAYN-------------------------AVISNYISV----------G 351
M + PD A+N V N + G
Sbjct: 206 EMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREG 265
Query: 352 DFD---------ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
D E +Y + M + EP+ TY +I G K V DA V ++ + +G
Sbjct: 266 ALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKG 325
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P T S + C G P AM ++K G + S+ Y L++ LS G L
Sbjct: 326 FKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPAL 385
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
L +EM E+G + Y VI GLC +G + +A ++++++ KG P Y+ L +
Sbjct: 386 QLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGY 445
Query: 523 LASNKLESAYNLFRKI 538
KL+SA + ++
Sbjct: 446 CKQLKLDSATEMVNRM 461
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 124/280 (44%), Gaps = 37/280 (13%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN+++ L + +++ D +G PD+ T + ++D + + ++ A +M+ R+
Sbjct: 402 TYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRM 461
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
G+ D + N +L LC+ +F +M+ K N++TYNI++ K +V
Sbjct: 462 WSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKV 521
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA---------------------- 321
E +L E+ ++G PD ++F L G + G ID A
Sbjct: 522 NEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNI 581
Query: 322 --------------IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
+++F MK GC PD Y VI + +G+ + K+
Sbjct: 582 IVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKR 641
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
P++ T+ R+++ L KV +A+ + ML +GIVP T
Sbjct: 642 FIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPET 681
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 134/333 (40%), Gaps = 49/333 (14%)
Query: 252 ASSLFNSMKGKVLF--NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL- 308
A +FNS K + F TY ++ G+ EME++L E+ E + L +++
Sbjct: 23 ALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEM-RENVNNALLEGAYIE 81
Query: 309 -IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY------- 360
++ GR G++ +A++ F+ M C P +++NA+++ + G ++ K Y
Sbjct: 82 AMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRG 141
Query: 361 ----------------------------KGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
+ M C+ N Y +++GL S + A
Sbjct: 142 VQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHAR 201
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
E+F+EML R + P + LC G + + K K G +L + + ++ L
Sbjct: 202 ELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGL 261
Query: 453 SGFGKCGMLL---------DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
G + + +M G+ D Y +I G C G +++A V++++
Sbjct: 262 CREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDA 321
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
+ KGF P Y L N + A +F+
Sbjct: 322 VFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFK 354
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 116/256 (45%), Gaps = 4/256 (1%)
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK-GCGPDTNAYNAVISNYISVGDFD 354
+GF + T+ +++ LG G ++ ++ M+E AY + NY G
Sbjct: 34 DGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIEAMKNYGRKGKVQ 93
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E + ++ M YNC+P++ ++ +++ L++ A +V+ M DRG+ T T +
Sbjct: 94 EAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRI 153
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
+ C P+AA+ + + ++GC + AY ++ L G+ +L+ EM
Sbjct: 154 KSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLC 213
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
D + ++ LC G + + ++ + L++G CP+ ++ L L+ A
Sbjct: 214 PDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRA--- 270
Query: 535 FRKIKIARQNDYARRL 550
R ++ +Y R++
Sbjct: 271 VRNSRVVEAEEYLRKM 286
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 189/376 (50%), Gaps = 1/376 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ R+ + + +M G+ +L + +++ +AG++ KA++++ +
Sbjct: 313 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 372
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
+ G++ D+++ ++++ C+ ++ A L + MK + L V+TY+++I+G + G +
Sbjct: 373 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNL 432
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+L+E+V G P+++ ++ L+ + GR++++ + + M+E+G PD YN++
Sbjct: 433 QGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSL 492
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I + +E Y M PN TY I G K+ ++ A F EML G+
Sbjct: 493 IIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGV 552
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+P+ G T+ +E C G A +++ + Y +L+ LS GK
Sbjct: 553 LPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFG 612
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
++ E+QE G + Y +I+G C G ++ A ++EE KG P + Y+ L + L
Sbjct: 613 IFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLC 672
Query: 524 ASNKLESAYNLFRKIK 539
+ ++E A NLF I+
Sbjct: 673 KAGEIERAKNLFDDIE 688
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 189/419 (45%), Gaps = 41/419 (9%)
Query: 139 GNLSGEAMVLFFNW--AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNP 196
G+ G+ M F +K +A V +Y+VI+ L R +L +M G+ P
Sbjct: 390 GHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKP 449
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLN--VVLWCLCQRLHVGAASS 254
+ + +M + + G+V ++ +L R+ + G+ D N ++ +C +R+ A +
Sbjct: 450 NAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRME-EARTY 508
Query: 255 LFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP-------------- 300
L ++ ++ N TY I G+SK G++ +R E+++ G P
Sbjct: 509 LMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCK 568
Query: 301 ---------------------DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
D T+S LI GL R G++ +A +F ++EKG P+
Sbjct: 569 EGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFT 628
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YN++IS G+ D+ + + M P++ TY LI GL K+ ++ A +F+++
Sbjct: 629 YNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE 688
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
RG+ P+ T + ++ C P AA + ++ G Y ++L K
Sbjct: 689 GRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFE 748
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
LDL+ EM E G+ S + +I G C G+L+ A ++EE + K F P+ + Y+ L
Sbjct: 749 KALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSL 806
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 176/381 (46%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D ++Y+++++ R + +L +M K + P + T S++++ R G +
Sbjct: 377 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 436
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+L + GLK +A ++ + V + + M+ + +L +V YN +I G+
Sbjct: 437 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGF 496
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K ++ E L E++ P++ T+ I+G +AG ++ A F+ M G P+
Sbjct: 497 CKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNV 556
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y A+I + G+ E ++ + S ++ TY+ LI GL ++ K+ +A +F E
Sbjct: 557 GIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSE 616
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ ++G++P+ T S + C G A + ++ G + Y +L+ L G+
Sbjct: 617 LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE 676
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+L+ +++ G + Y ++ G C A ++EE L +G P +Y+
Sbjct: 677 IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNV 736
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ N K E A +LF+++
Sbjct: 737 ILNFCCKEEKFEKALDLFQEM 757
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 159/331 (48%), Gaps = 2/331 (0%)
Query: 186 LSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
++M GV P++ + +++ + G V +A + + + D ++ +V++ L +
Sbjct: 544 FNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSR 603
Query: 246 RLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
+ A +F+ ++ K +L N TYN +ISG K G V + ++L+E+ +G +PD +T
Sbjct: 604 NGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVT 663
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
++ LI+GL +AG I+ A +FD ++ +G P+ Y A++ Y + + + M
Sbjct: 664 YNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEML 723
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
P+ Y +++ K K AL++F+EML++G ST + + +E C G
Sbjct: 724 LRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQ 782
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A + ++ + + Y L+ G G LW EMQE + Y ++
Sbjct: 783 EANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLL 842
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
G NIG + + EE + KG P ++ Y
Sbjct: 843 HGYHNIGNMSEVSALFEEMVAKGIEPDKMTY 873
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 151/313 (48%), Gaps = 2/313 (0%)
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
D++T S+++ R G++++A + L++ GL +A + N ++ C++ +V AS L
Sbjct: 590 DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLL 649
Query: 257 NSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
M K + +++TYNI+I G K G++ + + +I G +P+ +T++ +++G ++
Sbjct: 650 EEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKS 709
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
A ++ + M +G PD YN +++ F++ + ++ M + ++
Sbjct: 710 KNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SF 768
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
LI G KS K+ +A + EEM+++ +P+ T TS ++ C G A ++ + ++
Sbjct: 769 NTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQE 828
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
+ Y LL G + L+ EM G D Y +I C G +
Sbjct: 829 RNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVME 888
Query: 496 AVLVMEESLRKGF 508
A + +E L KG
Sbjct: 889 ACKLKDEILVKGM 901
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 170/392 (43%), Gaps = 1/392 (0%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
+ N H V + V+++ + + D + M +G+ PDL T I+++ F
Sbjct: 227 YTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGF 286
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNV 267
+ +A ML + D GLK + + N ++ ++ + A + + M + N+
Sbjct: 287 CMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANL 346
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+ +N +++G K G++ + +++E++ +G PDS T+S LIEG R + A E+ D
Sbjct: 347 IIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDE 406
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
MK++ P Y+ +I+ G+ + M +PN YT L++ K +
Sbjct: 407 MKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGR 466
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
V ++ + E M ++GI+P S + C A + + + + Y
Sbjct: 467 VEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGA 526
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
+ S G+ + ++EM G + IY +I G C G + A V L +
Sbjct: 527 FIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRR 586
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
YS L + L + K+ A+ +F +++
Sbjct: 587 VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQ 618
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 156/317 (49%), Gaps = 14/317 (4%)
Query: 104 GVFLQKLKGKGVIEDAL-WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKD 162
G+F +L+ KG++ +A +N ++ +GN+ +A L IK N D
Sbjct: 612 GIF-SELQEKGLLPNAFTYN-------SLISGSCKQGNVD-KASQLLEEMCIKGIN--PD 660
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ +YN+++ L + + N+ D+ G+ P+ T + ++D + ++ A Q+L
Sbjct: 661 IVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLE 720
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQ 282
+ G+ DA NV+L C+ A LF M K + +++N +I G+ K G+
Sbjct: 721 EMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGK 780
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ E +L+E++ + F P+ +T++ LI+ +AG + +A ++ M+E+ P Y +
Sbjct: 781 LQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTS 840
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
++ Y ++G+ E ++ M + EP+ TY +I + V +A ++ +E+L +G
Sbjct: 841 LLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKG 900
Query: 403 IVPSTGTITSFLEPLCS 419
+ +G P CS
Sbjct: 901 MPMKSGFRLGL--PTCS 915
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 166/389 (42%), Gaps = 53/389 (13%)
Query: 83 VKRIDSSRA-----VDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKV-- 135
KR++ +R ++ L P G F+ G +E A N LS V+ V
Sbjct: 499 AKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGI 558
Query: 136 --------VNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLS 187
GN++ V F I V +DV++Y+V++ L R + S
Sbjct: 559 YTALIEGHCKEGNVTEAFSVFRF---ILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFS 615
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
++ ++G+ P+ T + ++ + G V KA Q+L + G+ D + N+++ LC+
Sbjct: 616 ELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAG 675
Query: 248 HVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD----- 301
+ A +LF+ ++G+ L N +TY ++ G+ K ++L+E++ G PD
Sbjct: 676 EIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYN 735
Query: 302 -----------------------------SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+++F+ LIEG ++G++ +A + + M EK
Sbjct: 736 VILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQ 795
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ Y ++I + G E + + M N P TYT L+ G +++
Sbjct: 796 FIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVS 855
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
+FEEM+ +GI P T ++ C G
Sbjct: 856 ALFEEMVAKGIEPDKMTYYVMIDAYCREG 884
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 156/365 (42%), Gaps = 30/365 (8%)
Query: 177 KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESL 236
K FD MC V PD+ T + ++ + + G V A ++L + + D
Sbjct: 210 KVFDGMC-------AHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDE--- 259
Query: 237 NVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
A L SM K L ++ TY+I+I+G+ + E + +L E++
Sbjct: 260 ---------------AIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMID 304
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN--AYNAVISNYISVGDF 353
G P+ +T++ LI+G R G I+ A + D M CG + N +N +++ G
Sbjct: 305 VGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMV--ACGIEANLIIWNTLLNGVCKAGKM 362
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
++ ++ + M EP+ TY+ LI G + + +A A E+ +EM R + P+ T +
Sbjct: 363 EKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVI 422
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
+ LC G + ++ G K + Y L+ + G+ + M+E G
Sbjct: 423 INGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGI 482
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
D Y +I G C ++E A + E L + P+ Y + + ++E A
Sbjct: 483 LPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADR 542
Query: 534 LFRKI 538
F ++
Sbjct: 543 YFNEM 547
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 123/290 (42%), Gaps = 17/290 (5%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N + +++++ + K+G +VE V F P L+ + L+ L + +++ +VF
Sbjct: 153 NSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVF 212
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGD-----------------FDECMKYYKGMSSYNC 368
D M PD Y +IS + VG+ DE ++ + M
Sbjct: 213 DGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGL 272
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P++ TY LI+G ++ +A + EM+D G+ P T + ++ G A
Sbjct: 273 VPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFR 332
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ + G + +L + LL + GK L++ EM E G D + Y +I G C
Sbjct: 333 IKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHC 392
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ A +++E ++ P+ L YS + N L L+ + R++
Sbjct: 393 RGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREM 442
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 112/258 (43%), Gaps = 17/258 (6%)
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
SP+S+ F L++ + G + +A+ VF K P + N+++ + + + K
Sbjct: 151 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 210
Query: 359 YYKGMSSYNCEPNMDTYTRLISG-------------LL----KSRKVADALEVFEEMLDR 401
+ GM ++ P++ TYT +IS LL K+R + +A+E+ M+D+
Sbjct: 211 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDK 270
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G+VP T + C A +M + VG K Y L+ G
Sbjct: 271 GLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQA 330
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+ EM G ++ I+ ++ G+C G++E A+ +M+E + KG P YS L
Sbjct: 331 FRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEG 390
Query: 522 LLASNKLESAYNLFRKIK 539
+ A+ L ++K
Sbjct: 391 HCRGQNMARAFELLDEMK 408
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S+N +++ + ++L +M ++ P+ T + ++D +AG + +A ++ +
Sbjct: 767 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 826
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
++ + A++ +L ++ S+LF M K + + MTY ++I + + G V
Sbjct: 827 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNV 886
Query: 284 VEMERVLKEIVAEGFSPDS------LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+E ++ EI+ +G S T S + G AG +D+A EV +M + G
Sbjct: 887 MEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFG----- 941
Query: 338 NAYNAVISNYISVGDF 353
+SN S+GD
Sbjct: 942 -----WVSNTTSLGDL 952
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 207/433 (47%), Gaps = 3/433 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
I L + V +S ++V +V+ + +G + FF WA + + + ++ +++ALG+
Sbjct: 114 IASTLDALGVAVSPELVAEVLKNLSNAGMLALAFFRWAERQEGFSYTAEGFHNLIEALGK 173
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
K F + +++ M G+ +T +++ + RA +V +A++ ++ FGLK +
Sbjct: 174 IKQFRLVWSLVETMRCRGLLSK-DTFKLIVRRYARARKVKEAVETFEKMSIFGLKTELSD 232
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
N ++ L + V A +++ MK GK + ++ TY +++ GW ++ ++ + +E+
Sbjct: 233 YNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEM 292
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+ G PD + + LI ++G+ D+AI+VF M+ GC P + Y +I+ S
Sbjct: 293 IDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERL 352
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
DE +KY++ + T ++ ++ K A ++ +EM + P++ T
Sbjct: 353 DEALKYFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDEMRKCKVGPNSRTYDVI 412
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
L L A ++++ GC+ L Y +++ G+ M L +W +M E G
Sbjct: 413 LHYLIKSQKFEEAYNIFQRMGIDGCEPQLNTYTMMVGMFCSNGRVDMALKVWKQMGEKGV 472
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
++ +I GLC +LE A + +E L KG P ++S L L+ ++ A
Sbjct: 473 LPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVQGGRISLAQE 532
Query: 534 LFRKIKIARQNDY 546
+ K+ R+ +
Sbjct: 533 VALKLDAIRKTPF 545
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 206/426 (48%), Gaps = 5/426 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNR-GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALG 174
+ +AL + + D+V KV+ R N +A+ F + HP+ S++ V
Sbjct: 56 VSEALTKPTIQWTPDLVNKVMKRLWNHGPKALQFFKHLDRHHPSYTHSPSSFDHAVDIAA 115
Query: 175 RRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
R + F+ ++ M + P +TL+I+ + + G+ ++A++ + + G++ D
Sbjct: 116 RMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASNGKPHRAVRTFLSMAEHGIRQDLH 175
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
S N +L LC+ V A SL ++ + + +TYNI+ +G+ + + RVLKE+V
Sbjct: 176 SFNTLLDILCKSKRVETAHSLLKTLTSRFRPDTVTYNILANGYCLIKRTPMALRVLKEMV 235
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
G P +T++ +++G R+ +I +A E + MK++ C D Y VI + GD
Sbjct: 236 QRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVK 295
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI-VPSTGTITSF 413
+ + + M PN+ TY LI L K V +A+ VFEEM G+ VP+ T
Sbjct: 296 KAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVV 355
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
+ LC G A+ ++ + G + + Y +++R G+ L+++ +M +
Sbjct: 356 IRGLCHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEVEKALEVFGKMGDGSC 415
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVL---VMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
+ + Y +I+ + + E+ V+ ++ + + +GF P + ++++ N L+ + +
Sbjct: 416 LPNLDTYNVLISAMFVRKKSEDLVVAGKLLMDMVDRGFLPRKFTFNRVLNGLVITGNQDF 475
Query: 531 AYNLFR 536
A + R
Sbjct: 476 AKEILR 481
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
PS T+ E S G PH A+ + + G + L ++ LL L + L
Sbjct: 137 PSPKTLAILAERYASNGKPHRAVRTFLSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSL 196
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+ P D Y + G C I + A+ V++E +++G P+ + Y+ +
Sbjct: 197 LKTLTSRFRP-DTVTYNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFR 255
Query: 525 SNKLESAYNLFRKIK 539
SN+++ A+ + ++K
Sbjct: 256 SNQIKEAWEFYLEMK 270
>gi|255551140|ref|XP_002516618.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544438|gb|EEF45959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 577
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 196/430 (45%), Gaps = 19/430 (4%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E AL + ++ V + N S + + F WA K P +N ++ ALG+
Sbjct: 76 LETALDQTGIKPETSLLNAVFDHFNSSPKLLHSLFVWADKQPEFESSTTLFNSVINALGK 135
Query: 176 RKFFDFM-CNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML--GRLEDFGLKFD 232
K FD C VL + G+ +T +I++ + RAG AI+ DF ++
Sbjct: 136 MKEFDSAWCLVLD---RTGLVSS-DTFAILIRRYTRAGMPQSAIRTFEYAISLDFICDYN 191
Query: 233 AESL-NVVLWCLCQRLHVGAASSLFNSMK---GKVLFNVMTYNIVISGWSKLGQVVEMER 288
++L ++L LC+ HV A F+S K + +V YNI+++GW + ++ ER
Sbjct: 192 CDALLEILLDSLCKEGHVRVAKEYFDSRKQLDSCWIPHVRIYNIMLNGWFRSRKLKHAER 251
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
+ E+ SP +T+ L+EG R R++ AIE+ D M+++G P+ YN +I
Sbjct: 252 LWLEMKKNNVSPSVVTYGTLVEGYCRMRRVERAIELVDVMRKEGIEPNALVYNPIIDALA 311
Query: 349 SVGDFDECMKYYKGMSSYNCE----PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
G F E GM Y + P + TY L+ G K++ A +V + M+ RG V
Sbjct: 312 EEGRFKEV----SGMMEYFLQSESGPTISTYNSLVKGYCKAKDPVGASKVLKMMISRGFV 367
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P+ T F +G M +Y K + G + LLL+ L + + + +
Sbjct: 368 PTPTTYNYFFRHFSKFGMIEEGMNLYTKMIESGYTPDRLTFHLLLKMLCEEERLDLAVQI 427
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
EM+ G D +I C + + E A + E+ ++KG P L + +L+++L
Sbjct: 428 SKEMRSRGCDMDLATSTMLIHLFCRMHRFEEAFMEFEDMIQKGIVPQYLTFQRLNDELRK 487
Query: 525 SNKLESAYNL 534
+E A L
Sbjct: 488 RGMVERARKL 497
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 109/246 (44%), Gaps = 7/246 (2%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K NV+ V +Y +V+ R + + ++ M KEG+ P+ + ++D+ G+
Sbjct: 256 MKKNNVSPSVVTYGTLVEGYCRMRRVERAIELVDVMRKEGIEPNALVYNPIIDALAEEGR 315
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ-RLHVGAASSLFNSMKGKVLFNVMTYNI 272
+ M+ + N ++ C+ + VGA+ L + + TYN
Sbjct: 316 FKEVSGMMEYFLQSESGPTISTYNSLVKGYCKAKDPVGASKVLKMMISRGFVPTPTTYNY 375
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+SK G + E + +++ G++PD LTF L++ L R+D A+++ M+ +G
Sbjct: 376 FFRHFSKFGMIEEGMNLYTKMIESGYTPDRLTFHLLLKMLCEEERLDLAVQISKEMRSRG 435
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK------SR 386
C D +I + + F+E ++ M P T+ RL L K +R
Sbjct: 436 CDMDLATSTMLIHLFCRMHRFEEAFMEFEDMIQKGIVPQYLTFQRLNDELRKRGMVERAR 495
Query: 387 KVADAL 392
K++D +
Sbjct: 496 KLSDMM 501
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 155/382 (40%), Gaps = 31/382 (8%)
Query: 179 FDFMCNVLSD---------MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGL 229
F +CN+LSD + + G+ P+ L+ V D F + ++ ++ + D
Sbjct: 61 FSTLCNLLSDPNLKPLETALDQTGIKPETSLLNAVFDHFNSSPKLLHSLFVWA---DKQP 117
Query: 230 KFDAES--LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEME 287
+F++ + N V+ L + +A L G L + T+ I+I +++ G
Sbjct: 118 EFESSTTLFNSVINALGKMKEFDSAWCLVLDRTG--LVSSDTFAILIRRYTRAGMPQSAI 175
Query: 288 RVLKEIVAEGFSPD---SLTFSFLIEGLGRAGRIDDAIEVFDTMKE-KGCG-PDTNAYNA 342
R + ++ F D L++ L + G + A E FD+ K+ C P YN
Sbjct: 176 RTFEYAISLDFICDYNCDALLEILLDSLCKEGHVRVAKEYFDSRKQLDSCWIPHVRIYNI 235
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+++ + + + M N P++ TY L+ G + R+V A+E+ + M G
Sbjct: 236 MLNGWFRSRKLKHAERLWLEMKKNNVSPSVVTYGTLVEGYCRMRRVERAIELVDVMRKEG 295
Query: 403 IVPSTGTITSFLEPLCSYG--PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
I P+ ++ L G + MM Y + G +S Y L++ G+ K
Sbjct: 296 IEPNALVYNPIIDALAEEGRFKEVSGMMEYFLQSESGPTIS--TYNSLVK---GYCKAKD 350
Query: 461 LL---DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+ + M G+ Y Y G +E + + + + G+ P RL +
Sbjct: 351 PVGASKVLKMMISRGFVPTPTTYNYFFRHFSKFGMIEEGMNLYTKMIESGYTPDRLTFHL 410
Query: 518 LSNKLLASNKLESAYNLFRKIK 539
L L +L+ A + ++++
Sbjct: 411 LLKMLCEEERLDLAVQISKEMR 432
>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 186/412 (45%), Gaps = 4/412 (0%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
+V K++ R + A FF W SY+++V LG+ K FD M +++ M
Sbjct: 1413 LVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMV 1472
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+ G L T++ VM A + +AI +++ FG+ D +++NV+L LC+ V
Sbjct: 1473 EVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVK 1532
Query: 251 AASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A +F ++G + + ++N ++ GW K + E ++E+ GFSP +T++ L+E
Sbjct: 1533 RARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVE 1592
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
+ D M+++ C P+ Y ++ G E + + + P
Sbjct: 1593 AYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAP 1652
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
+ Y LI L ++ ++ DA V EEM GI P+ T + + C + A+ +
Sbjct: 1653 DASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLL 1712
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
K + C + Y LL+ +LL L M D Y +++ LC
Sbjct: 1713 VKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRN 1772
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
G++ + L +EE + KGF P + + + KL N L+S Y +KI++ R
Sbjct: 1773 GKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRN-LQSVY---KKIQVLR 1820
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 190/411 (46%), Gaps = 2/411 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L + + ++S D+V +V+ R + FF WA + P SY+++V LG
Sbjct: 68 LEVGLSSFSSNVSTDLVEQVLKRCKNIAFSAHRFFLWAKRIPGFEPSDDSYHIVVDILGG 127
Query: 176 RKFFDFMCNVLSDMAKEGVNP-DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
F + + L ++ + + E V ++ RA AI+ R+ +FG++ +
Sbjct: 128 SGQFAILWDFLIEIRETRSSVITHELFWHVFTAYSRADLPQDAIRAFNRMGEFGIRAGVD 187
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
L+ +L+ LC+R HV A F+ +K +V TY+I+ GW +G ++V E+
Sbjct: 188 DLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTYSILTRGWGVVGDSNNAQKVFDEMR 247
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
G D L ++ L+E L + G+ D+A ++F M G PD + Y+ I + D
Sbjct: 248 ERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLH 307
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ + N PN+ TY +I L K + V +A ++ +EM++RG+ P T + +
Sbjct: 308 TVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQ 367
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
C + ++A+ + K+ + C Y ++L+ L G+ ++W M + G+
Sbjct: 368 AYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWESMGKRGFY 427
Query: 475 SDGEIYEYVIAGLCNIG-QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
Y +I G C +LE A E + +G P L ++LL
Sbjct: 428 PSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRDRLLG 478
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 98/240 (40%), Gaps = 2/240 (0%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA-YNAVISNYISVGDFDE 355
GF P ++ +++ LG +G+ + ++E T+ + V + Y +
Sbjct: 110 GFEPSDDSYHIVVDILGGSGQFAILWDFLIEIRETRSSVITHELFWHVFTAYSRADLPQD 169
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
++ + M + +D +L+ L K + VA A + F++ + PS T +
Sbjct: 170 AIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDK-VKSVFNPSVKTYSILTR 228
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
G + A ++ + R+ GC + + AY LL L GK ++ EM +G
Sbjct: 229 GWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDP 288
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
D + Y I C L V+E + RK P+ Y+ + KL +E AY +
Sbjct: 289 DADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQIL 348
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 54/150 (36%), Gaps = 1/150 (0%)
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
DA+ F M + GI + L LC A + K + V S+ Y +L
Sbjct: 169 DAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSV-FNPSVKTYSILT 227
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
R G ++ EM+E G D Y ++ LC G+ + A + E G
Sbjct: 228 RGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVD 287
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P YS N L + Y + + K
Sbjct: 288 PDADTYSIFIRSSCQENDLHTVYRVLERTK 317
>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Cucumis sativus]
Length = 481
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 202/411 (49%), Gaps = 13/411 (3%)
Query: 139 GNLSGEAMVLFFNWAIK-HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
GN+ FF+ ++ HP + S+N ++ L + + + ++ + M G++PD
Sbjct: 67 GNIDVIQAFHFFDLMMRSHP--IPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPD 124
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVV---LWCLCQRLHVGAASS 254
L TL+I+ + +V + + + + G D + N + L+ LC+ H A
Sbjct: 125 LFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKE 184
Query: 255 LFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
+F MK + ++ NV++Y+ ++ G+ G++ E +R+ E+V +G P+ + F+ LI+ L
Sbjct: 185 IFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILC 244
Query: 314 RAGRIDD---AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
+ G+I D A ++F +M KGC + +Y +I+ Y + +E M Y M P
Sbjct: 245 KEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRP 304
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
N+ TY+ L++GLL++ KV DA ++F M GI + FL+ LC G AM ++
Sbjct: 305 NVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELF 364
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
+ + KL +Y L+ L GK + + + ++ + G + +I G C +
Sbjct: 365 NELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRV 424
Query: 491 GQLENAVLV---MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Q++ A ++ ME+ G P + Y+ L SNKLE NL K+
Sbjct: 425 EQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 475
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 188/381 (49%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+ +V +YNVI++ + + + + M KEG++P++ T + ++D+ + +V +A+
Sbjct: 203 VSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAM 262
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+L + G+ + S N V+ LC + + L M+GK L + +TYN +++G+
Sbjct: 263 ALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGF 322
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G + + +L E+V +G SP+ +T++ LI + +AG + A+E+FD M+ +G P+
Sbjct: 323 CKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNE 382
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +I + G +E K M P++ TY L+ G +V +A+ +
Sbjct: 383 RTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRG 442
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M++RG+ P + ++ + C A M ++ + G Y L++ L K
Sbjct: 443 MVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQK 502
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
DL+ EM G P D Y +I C G+L A+ + +E +++GF P + YS
Sbjct: 503 LVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSV 562
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L N L + + A L K+
Sbjct: 563 LINGLNKKARTKVAKRLLLKL 583
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 190/414 (45%), Gaps = 41/414 (9%)
Query: 130 DVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRR-----KFFDFMCN 184
D+V K ++R +A+ L + A +H A V SYN ++ AL RR + +D
Sbjct: 136 DLVVKSLSRLGFVPKALTLL-HLANRH-GFAPTVLSYNAVLDALLRRSSSNHRDYDDAER 193
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V DM + GV+P++ T ++++ + G + K + + ++E G+
Sbjct: 194 VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISP------------- 240
Query: 245 QRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
NV+TYN +I K +V E +L+ + G + + ++
Sbjct: 241 ---------------------NVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLIS 279
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
++ +I GL GR+ + E+ + M+ KG PD YN +++ + G+ + + M
Sbjct: 280 YNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMV 339
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
PN+ TYT LI+ + K+ ++ A+E+F++M RG+ P+ T T+ ++ C G +
Sbjct: 340 GKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMN 399
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A + + G S+ Y L+ G+ + + M E G P D Y VI
Sbjct: 400 EAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVI 459
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
AG C +L A + EE + KG P + YS L L KL A++LFR++
Sbjct: 460 AGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREM 513
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 218/451 (48%), Gaps = 27/451 (5%)
Query: 106 FLQKLKGKGVIEDAL-WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
F++K++ +G+ + + +N +D S + EAM L A+ VA ++
Sbjct: 229 FMRKMEKEGISPNVVTYNTLIDASC--------KKKKVKEAMALLRAMAVG--GVAANLI 278
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SYN ++ L + + ++ +M +G+ PD T + +++ F + G +++ + +L +
Sbjct: 279 SYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEM 338
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
GL + + ++ C+C+ ++ A +F+ M+ + L N TY +I G+ + G +
Sbjct: 339 VGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLM 398
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E +VL E++ GFSP +T++ L+ G GR+ +A+ + M E+G PD +Y+ V
Sbjct: 399 NEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTV 458
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I+ + + + + + M P+ TY+ LI GL +K+ +A ++F EM+ RG+
Sbjct: 459 IAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGL 518
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG---- 459
P T TS + C G A+ ++ + + G Y +L+ L+ +
Sbjct: 519 PPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKR 578
Query: 460 MLLDLWHE-----------MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+LL L++E + E+ ++ + E ++ G C G + A V + L++
Sbjct: 579 LLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNH 638
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P+ +Y+ + + + AYNL+ +++
Sbjct: 639 KPNAAIYNLMIHGHSRGGNVHKAYNLYMELE 669
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 127/307 (41%), Gaps = 40/307 (13%)
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR-----IDDAIEV 324
+++V+ S+LG V + +L GF+P L+++ +++ L R DDA V
Sbjct: 135 FDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERV 194
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F M G P+ YN +I +S GD ++ + + + M PN+ TY LI K
Sbjct: 195 FRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCK 254
Query: 385 SRKVADAL-----------------------------------EVFEEMLDRGIVPSTGT 409
+KV +A+ E+ EEM +G+VP T
Sbjct: 255 KKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVT 314
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
+ + C G H +++ + G ++ Y L+ + G ++++ +M+
Sbjct: 315 YNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMR 374
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
G + Y +I G C G + A V+ E + GF PS + Y+ L + +++
Sbjct: 375 VRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQ 434
Query: 530 SAYNLFR 536
A + R
Sbjct: 435 EAVGILR 441
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 97/468 (20%), Positives = 191/468 (40%), Gaps = 68/468 (14%)
Query: 104 GVFLQKLKGKGVIEDAL-WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKD 162
G +++++GKG++ D + +N +V GNL + +VL K ++ +
Sbjct: 297 GELVEEMRGKGLVPDEVTYNT-------LVNGFCKEGNLH-QGLVLLSEMVGK--GLSPN 346
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +Y ++ + + + M G+ P+ T + ++D F + G + +A ++L
Sbjct: 347 VVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLS 406
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSK-- 279
+ G + N ++ C V A + M + L +V++Y+ VI+G+ +
Sbjct: 407 EMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRER 466
Query: 280 -LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
LG+ +M+ +E+V +G PD++T+S LI+GL ++ +A ++F M +G PD
Sbjct: 467 ELGKAFQMK---EEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEV 523
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS--RKVA------- 389
Y ++I+ Y G+ + ++ + M P+ TY+ LI+GL K KVA
Sbjct: 524 TYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKL 583
Query: 390 -----------------------------------------DALEVFEEMLDRGIVPSTG 408
+A VF+ ML R P+
Sbjct: 584 FYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAA 643
Query: 409 TITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM 468
+ G H A +Y + A L++ L+ G L L +
Sbjct: 644 IYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNI 703
Query: 469 QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
S +D ++ + ++ G ++ + V+ E + G P ++S
Sbjct: 704 LRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPDGGIHS 751
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/271 (19%), Positives = 114/271 (42%), Gaps = 18/271 (6%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D +Y+ +++ L ++ ++ +M + G+ PD T + +++++ G++ KA+
Sbjct: 483 VLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKAL 542
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF------NSMKGKVLFNVMTYNI 272
++ + G D + +V++ L ++ A L S+ V +N + N
Sbjct: 543 RLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENC 602
Query: 273 ----------VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
++ G+ G + E +RV K ++ P++ ++ +I G R G + A
Sbjct: 603 SNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAY 662
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR-LISG 381
++ ++ T A A++ G DE + + + +C N + L+
Sbjct: 663 NLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILR-SCRLNDAKVAKVLVEV 721
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
K + L V EM G++P G +S
Sbjct: 722 NFKEGNMDAVLNVLTEMAKDGLLPDGGIHSS 752
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 186/412 (45%), Gaps = 4/412 (0%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
+V K++ R + A FF W SY+++V LG+ K FD M +++ M
Sbjct: 1454 LVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMV 1513
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+ G L T++ VM A + +AI +++ FG+ D +++NV+L LC+ V
Sbjct: 1514 EVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVK 1573
Query: 251 AASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A +F ++G + + ++N ++ GW K + E ++E+ GFSP +T++ L+E
Sbjct: 1574 RARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVE 1633
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
+ D M+++ C P+ Y ++ G E + + + P
Sbjct: 1634 AYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAP 1693
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
+ Y LI L ++ ++ DA V EEM GI P+ T + + C + A+ +
Sbjct: 1694 DASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLL 1753
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
K + C + Y LL+ +LL L M D Y +++ LC
Sbjct: 1754 VKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRN 1813
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
G++ + L +EE + KGF P + + + KL N L+S Y +KI++ R
Sbjct: 1814 GKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRN-LQSVY---KKIQVLR 1861
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 192/396 (48%), Gaps = 5/396 (1%)
Query: 145 AMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIV 204
A+ L+ + AI H V +Y+ ++ L R D C +L +MA G P+ T + +
Sbjct: 84 ALTLYDDMAI-HFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTL 142
Query: 205 MDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM---KG 261
+++ + G+ +A +L ++ G + + +++ LC+ + AA + + M +
Sbjct: 143 VNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIES 202
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
+ +V+T+N V+ G K ++++ V K + G P+ +T+S LI+GL + ++D+A
Sbjct: 203 GLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEA 262
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+++ M E GC +T Y+ V+ + VG ++ + + M C P+ TY LI G
Sbjct: 263 LQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDG 322
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
K +++ +A+ + EML+ G PS T T+ LC G A+ + GC +
Sbjct: 323 FFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPN 382
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI-YEYVIAGLCNIGQLENAVLVM 500
Y ++ L G+ L + +M + I Y +I GLC G+++ A +
Sbjct: 383 AITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFL 442
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
E +R G P + +S L N L + ++++ LFR
Sbjct: 443 ERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFR 478
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 172/347 (49%), Gaps = 2/347 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
++ DV ++N ++ L + + NV + G P++ T S ++D + ++ +A
Sbjct: 203 GLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEA 262
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISG 276
+Q+L ++ + G + + + + V+ L + + A + M+ L + +TYN +I G
Sbjct: 263 LQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDG 322
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K ++ E +L+E++ GF P +T++ L GL R+GR D+A+E+ D M +GC P+
Sbjct: 323 FFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPN 382
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNC-EPNMDTYTRLISGLLKSRKVADALEVF 395
Y++++ G E + Y++ M+ P++ Y+ LI GL K+ K+ +A E
Sbjct: 383 AITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFL 442
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
E M+ G +P T + + LC G + +++ + GC + Y L+ RL
Sbjct: 443 ERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRA 502
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
+ DL+ +M+ G D +I GL + + E+A + +E
Sbjct: 503 SRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 189/402 (47%), Gaps = 12/402 (2%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF K + DV +Y ++ LG+++ ++ + +G +P + T +
Sbjct: 13 KAITLFKQMVDKA--IYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNT 70
Query: 204 VMDSFIRAGQVYKAIQMLGRLE-DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK 262
++D + G++ A+ + + FG + + + ++ LC+ V L M G+
Sbjct: 71 MIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGR 130
Query: 263 -VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
N +TYN +++ G+ E +L+++ A G P+ +TF +I+GL + G I+ A
Sbjct: 131 GCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAA 190
Query: 322 IEVFDTM--KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
V D M E G PD +N+V+ + +K C PN+ TY+ LI
Sbjct: 191 FRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLI 250
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
GL K K+ +AL++ +M++ G +T T ++ ++ L G A+++ ++ R GC
Sbjct: 251 DGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCL 310
Query: 440 LSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
Y L+ GF K L + L EM E+G+ Y + GLC G+ + A
Sbjct: 311 PDAVTYNTLI---DGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEA 367
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
V +++ +G P+ + YS + + L + ++ A F K+
Sbjct: 368 VEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM 409
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 164/339 (48%), Gaps = 4/339 (1%)
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++D ++ +V KAI + ++ D + D + ++ L ++ V A LF + K
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAE-GFSPDSLTFSFLIEGLGRAGRIDDA 321
V+TYN +I G K G++ + ++ GF P +T+S LI+GL R +D
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
++ + M +GC P+ YN +++ + G E + M++ C P + T+ +I G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 382 LLKSRKVADALEVFEEM--LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
L K ++ A V +EM ++ G+ P T S L+ LC A ++K+A + GC+
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
++ Y L+ LS K L L +M E G ++ Y V+ GL +G++E+AV+V
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ + G P + Y+ L + +L A L R++
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREM 339
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 192/415 (46%), Gaps = 47/415 (11%)
Query: 160 AKDVKSYNVIVKAL---GRRK-FFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
A + +YN +V AL GR K F ++L MA G P+L T +++ + G++
Sbjct: 133 APNAVTYNTLVNALLGQGRSKEAF----SLLEQMAANGCPPELITFGLIIKGLCKEGEIE 188
Query: 216 KAIQMLGRL--EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN-SMKGKVLFNVMTYNI 272
A +++ + + GL D + N VL LC+ + A ++F +++ NV+TY+
Sbjct: 189 AAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYST 248
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G SK+ ++ E ++L ++V G +++T+S +++GL + GR++DA+ V M++ G
Sbjct: 249 LIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAG 308
Query: 333 CGPDTNAYNAVISNYIS-----------------------------------VGDFDECM 357
C PD YN +I + G FDE +
Sbjct: 309 CLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAV 368
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML-DRGIVPSTGTITSFLEP 416
+ M++ C PN TY+ ++ GL K+ +V +AL FE+M D + P ++ ++
Sbjct: 369 EILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDG 428
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
LC G A ++ + G + + +L+ L G+ L+L+ M E G D
Sbjct: 429 LCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPD 488
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
Y ++ LC +++ A + ++ G P R + + LL N+ E A
Sbjct: 489 MVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDA 543
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 184/410 (44%), Gaps = 12/410 (2%)
Query: 144 EAMVLFFNWAIK--HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKE-GVNPDLET 200
EA LF K HP V +YN ++ L + + + DMA G P + T
Sbjct: 48 EAYDLFEEARAKGCHPTVV----TYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVT 103
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
S ++D R +V K ++L + G +A + N ++ L + A SL M
Sbjct: 104 YSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMA 163
Query: 261 GK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEI--VAEGFSPDSLTFSFLIEGLGRAGR 317
++T+ ++I G K G++ RV+ E+ + G SPD +TF+ +++GL + R
Sbjct: 164 ANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQR 223
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
I DA VF E+GC P+ Y+ +I + DE ++ M C N TY+
Sbjct: 224 ILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYST 283
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
++ GLLK ++ DA+ V +M D G +P T + ++ A+ + ++ + G
Sbjct: 284 VVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG 343
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
S+ Y L L G+ +++ M G + Y ++ GLC G++ A+
Sbjct: 344 FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEAL 403
Query: 498 LVMEESLR-KGFCPSRLVYSKLSNKLLASNKLESAYN-LFRKIKIARQND 545
E+ R + P + YS L + L + K++ AY L R I+ R D
Sbjct: 404 GYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPD 453
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 156/366 (42%), Gaps = 27/366 (7%)
Query: 34 LSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVD 93
+++N +L K LD H+V K + PNV + S + + +D
Sbjct: 209 ITFNSVLDGLCKEQRILDAHNVFK------RALERGCRPNVV--TYSTLIDGLSKMAKMD 260
Query: 94 EFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWA 153
E L L K+ G N VV ++ G + +VL
Sbjct: 261 EALQ--------LLAKMVELG------CRANTVTYSTVVDGLLKVGRMEDAVVVL---RQ 303
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ D +YN ++ +R+ +L +M + G +P + T + + R+G+
Sbjct: 304 MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGR 363
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK--VLFNVMTYN 271
+A+++L + G +A + + ++ LC+ V A F M V +V+ Y+
Sbjct: 364 FDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYS 423
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I G K G++ E L+ ++ G PD +TFS LI GL AGRID +E+F M E+
Sbjct: 424 ALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAER 483
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
GC PD Y ++ DE ++ M S P+ T +I GLL+ + DA
Sbjct: 484 GCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDA 543
Query: 392 LEVFEE 397
+ +E
Sbjct: 544 KRIQDE 549
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 189/382 (49%), Gaps = 5/382 (1%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N++ +V S+N+++KA+ + D V +MA + PD+ T +MD + ++ +A
Sbjct: 183 NISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEA 242
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVIS 275
+ +L ++ G + + NV++ LC++ + + L ++M KG V N +TYN +I+
Sbjct: 243 VLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVP-NEVTYNTIIN 301
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G G++ + +L +VA P+ +T+ LI GL + GR D + + +++E+G
Sbjct: 302 GLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHA 361
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+ AY+ +IS +E M +K M C+PN+ Y+ LI GL + K+ +A E+
Sbjct: 362 NEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEIL 421
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
EM+++G P+ T +S ++ G A+ ++K+ K C + Y +L+ L
Sbjct: 422 CEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCED 481
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL--RKGFCPSRL 513
GK + +W M G D Y +I GLCN G +E + + E L P +
Sbjct: 482 GKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVV 541
Query: 514 VYSKLSNKLLASNKLESAYNLF 535
Y+ L L N + A +L
Sbjct: 542 TYNILLRALCKQNSISHAIDLL 563
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 155/340 (45%), Gaps = 4/340 (1%)
Query: 203 IVMDSFIRAGQVYKAIQMLGRLED-FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+V ++ +A KAI++ GR+ D F + S N VL + Q A + G
Sbjct: 120 LVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVG 179
Query: 262 ---KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+ NV+++N+VI KLG V V +E+ + PD T+ L++GL + RI
Sbjct: 180 GKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRI 239
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
D+A+ + D M+ +GC P + +N +I+ GD K M C PN TY +
Sbjct: 240 DEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTI 299
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I+GL K+ A+ + + M+ VP+ T + + L G + + + G
Sbjct: 300 INGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGH 359
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ AY L+ L K + LW +M E G + +Y +I GLC G+L+ A
Sbjct: 360 HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKE 419
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++ E + KG P+ YS L + + A +++++
Sbjct: 420 ILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEM 459
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 134/320 (41%), Gaps = 47/320 (14%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ L + D ++L M P+ T +++ ++ G+ + +L L
Sbjct: 295 TYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSL 354
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
E+ G + + + ++ L + A L+ M K N++ Y+ +I G + G++
Sbjct: 355 EERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKL 414
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC---------- 333
E + +L E+V +G +P++ T+S LI+G + G AI V+ M + C
Sbjct: 415 DEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVL 474
Query: 334 -------------------------GPDTNAYNAVISNYISVGDFDECMKYYKGM--SSY 366
PD AY+++I + G + +K + M
Sbjct: 475 IHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQES 534
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS-YGPPHA 425
+ +P++ TY L+ L K ++ A+++ MLDRG P T FL L PP
Sbjct: 535 DSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQD 594
Query: 426 A--------MMMYKKARKVG 437
+ ++K+ R VG
Sbjct: 595 GREFLDELVVRLHKRQRIVG 614
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 5/248 (2%)
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTM-KEKGCGPDTNAYNAVISNYISVGDFDECMKYYK-G 362
F + G+A + AIE+F M E C ++N+V++ I G F +++Y+ G
Sbjct: 118 FILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECG 177
Query: 363 MSS-YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
+ N PN+ ++ +I + K V A+EVF EM + P T + ++ LC
Sbjct: 178 VGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKED 237
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
A+++ + + GC S + +L+ L G + L M G + Y
Sbjct: 238 RIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYN 297
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI--K 539
+I GLC G+L+ AV +++ + P+ + Y L N L+ + +L + +
Sbjct: 298 TIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEER 357
Query: 540 IARQNDYA 547
N+YA
Sbjct: 358 GHHANEYA 365
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 79/395 (20%), Positives = 152/395 (38%), Gaps = 77/395 (19%)
Query: 27 STSVRSNLSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRI 86
S V ++++Y L++ K S+D H+L L + H++ Y S K
Sbjct: 322 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEE----RGHHANEYAYSTLISGLFKEE 377
Query: 87 DSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAM 146
S A+ LW K+V +G
Sbjct: 378 KSEEAM--------------------------GLWK-----------KMVEKGC------ 394
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
PN+ Y+ ++ L R D +L +M +G P+ T S ++
Sbjct: 395 ---------QPNIV----VYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIK 441
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF- 265
F + G KAI++ + + +V++ LC+ + A ++ M G+ L
Sbjct: 442 GFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRP 501
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAE--GFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+V+ Y+ +I G G V ++ E++ + PD +T++ L+ L + I AI+
Sbjct: 502 DVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAID 561
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+ ++M ++GC PD +I+ I + E + + + L+ L
Sbjct: 562 LLNSMLDRGCNPD------LITCNIFLNALREKLNPPQDGREF--------LDELVVRLH 607
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
K +++ A ++ E ML + + P+ T + LC
Sbjct: 608 KRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELC 642
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 176/379 (46%), Gaps = 1/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D ++N ++ L + F D G P + T + +++ + G+ A +
Sbjct: 164 DAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLF 223
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++E+ G + + + N+++ LC+ V A +F+ MK K + ++ TYN +I G
Sbjct: 224 KKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNF 283
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ E +L E+ + P+ TF+ L++ + + G++ +A VF TM E G PD Y
Sbjct: 284 RRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTY 343
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++++ Y + E K + M + C+P+ +Y LI G K++++ +A ++F EM+
Sbjct: 344 SSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIH 403
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G+ P + + LC G A ++K G L Y +LL G G
Sbjct: 404 QGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGK 463
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L+ MQ + D +Y +I +C G L++A + E +G P+ +Y+ + N
Sbjct: 464 AFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIIN 523
Query: 521 KLLASNKLESAYNLFRKIK 539
L L+ A FR ++
Sbjct: 524 NLCKEGLLDEALEAFRNME 542
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 185/391 (47%), Gaps = 18/391 (4%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
P + + K + IVK +G +++ + ++ M G++PD+ TLSI++D F +V
Sbjct: 92 PCIIQFTKLLSAIVK-MG--QYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDL 148
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVIS 275
A + ++ GL+ DA + N ++ LC+ A F+ + V TY +I+
Sbjct: 149 AFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIIN 208
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G K+G+ + K++ G P+ +T++ LI+ L + +++A+++F MK K P
Sbjct: 209 GLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISP 268
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D YN++I + + E M+S N PN+ T+ L+ + K KV++A VF
Sbjct: 269 DIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVF 328
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV-------GCKLSLTAYKLL 448
+ M + G+ P T +S + YG ++ M +ARK+ GCK +Y +L
Sbjct: 329 KTMTEMGVEPDVVTYSSLM-----YG--YSLRMEIVEARKLFDAMITKGCKPDAFSYNIL 381
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
++ + L++EM G D Y +I GLC +G+L A + + G
Sbjct: 382 IKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGN 441
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P YS L + L A+ LFR ++
Sbjct: 442 LPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQ 472
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 158/355 (44%), Gaps = 1/355 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +Y I+ L + + M + G P++ T +I++DS + V +A+ +
Sbjct: 200 VYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFS 259
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLG 281
++ + D + N ++ LC AS+L N M ++ N+ T+N+++ K G
Sbjct: 260 YMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEG 319
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+V E + V K + G PD +T+S L+ G I +A ++FD M KGC PD +YN
Sbjct: 320 KVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYN 379
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I Y DE + + M P+ Y LI GL + ++ +A ++F+ M
Sbjct: 380 ILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSN 439
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G +P T + L+ C G A +++ + K + Y +L+ + FG
Sbjct: 440 GNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDA 499
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
L+ E+ G + +IY +I LC G L+ A+ G P Y+
Sbjct: 500 RKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYN 554
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 186/363 (51%), Gaps = 4/363 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E+A NV ++ +++ + + L EA+ +F +K ++ D+ +YN +++ L
Sbjct: 226 MEEAGCQPNV-VTYNILIDSLCKDKLVNEALDIF--SYMKAKRISPDIFTYNSLIQGLCN 282
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ + +L++M + P++ T ++++D+ + G+V +A + + + G++ D +
Sbjct: 283 FRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVT 342
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
+ +++ R+ + A LF++M K + +YNI+I G+ K ++ E +++ E++
Sbjct: 343 YSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMI 402
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
+G +PD++ ++ LI GL + GR+ +A ++F M G PD Y+ ++ + G
Sbjct: 403 HQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLG 462
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ + ++ M S +P++ Y LI + K + DA ++F E+ +G++P+ T+ +
Sbjct: 463 KAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTII 522
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
LC G A+ ++ GC +Y +++R + L EM++ G+
Sbjct: 523 NNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFV 582
Query: 475 SDG 477
++
Sbjct: 583 AEA 585
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 164/354 (46%), Gaps = 5/354 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PNV +YN+++ +L + K + ++ S M + ++PD+ T + ++ +
Sbjct: 232 QPNVV----TYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWK 287
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVI 274
+A +L + + + + NV++ +C+ V A +F +M + V +V+TY+ ++
Sbjct: 288 EASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLM 347
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+S ++VE ++ ++ +G PD+ +++ LI+G +A RID+A ++F+ M +G
Sbjct: 348 YGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLT 407
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN +I +G E +K M S P++ TY+ L+ G K + A +
Sbjct: 408 PDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRL 467
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F M + P ++ +C +G A ++ + G ++ Y ++ L
Sbjct: 468 FRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCK 527
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
G L+ + M+ G P D Y +I G A ++ E +GF
Sbjct: 528 EGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGF 581
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 133/291 (45%), Gaps = 38/291 (13%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N+ ++ ++NV+V A+ + V M + GV PD+ T S +M + ++ +A
Sbjct: 300 NIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEA 359
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVIS 275
++ + G K DA S N+++ C+ + A LFN M +G NV YN +I
Sbjct: 360 RKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNV-NYNTLIH 418
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG------LGRA-------------- 315
G +LG++ E + + K + + G PD T+S L++G LG+A
Sbjct: 419 GLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKP 478
Query: 316 ---------------GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
G + DA ++F + +G P+ Y +I+N G DE ++ +
Sbjct: 479 DIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAF 538
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
+ M C P+ +Y +I G L+ + + A ++ EM DRG V GT T
Sbjct: 539 RNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTT 589
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 84/195 (43%), Gaps = 1/195 (0%)
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA-LEVFEEMLDRGIVPST 407
S + D+ + + M P + +T+L+S ++K + A + + ++M G+ P
Sbjct: 71 SFRNIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDI 130
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T++ ++ A ++ K K+G + + L+ L GK ++ + +
Sbjct: 131 YTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDD 190
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
+ SG Y +I GLC IG+ A + ++ G P+ + Y+ L + L
Sbjct: 191 FEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKL 250
Query: 528 LESAYNLFRKIKIAR 542
+ A ++F +K R
Sbjct: 251 VNEALDIFSYMKAKR 265
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 182/382 (47%), Gaps = 1/382 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N V SYN I+ L +F V M G+ PD+ T +I + SF R + + A
Sbjct: 106 NCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSA 165
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISG 276
+++L + G + +A + V+ + + A LFN M +F +V T+N ++
Sbjct: 166 LRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHT 225
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K G+V E ER+L +++ +G + TF+ I+GL R G + A+ + D++ +G PD
Sbjct: 226 LCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPD 285
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN +I + E KY + + EP+ TY LI G K + +A ++ +
Sbjct: 286 VVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQ 345
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+ +G VP T S + LC A+ ++ A G K ++ Y +L++ L G
Sbjct: 346 GAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEG 405
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
L + +EM E+G SD Y VI GLC +G + +A +M +++ KG+ P ++
Sbjct: 406 LILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFN 465
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
L + K+E+ + K+
Sbjct: 466 TLIDGYCKQLKMETTIQILNKM 487
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 177/378 (46%), Gaps = 1/378 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV ++N ++ L ++ +L+ + K+G+ +L T +I + R G + A+ ML
Sbjct: 215 DVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSML 274
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ GL D + N ++ LC+ +V A + + G + + TYN +I G+ K+
Sbjct: 275 DSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKM 334
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + E++L+ + +GF PD T+ LI GL + ID A+ +F+ KG P Y
Sbjct: 335 GMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILY 394
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I G + ++ MS C ++ TY +I+GL K V+DA + + +
Sbjct: 395 NMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIA 454
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G VP T + ++ C + + K G + Y +L LS K
Sbjct: 455 KGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNED 514
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L++ + M E G + Y + LC G++ A+ +++E L KG P + ++ + +
Sbjct: 515 LMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIIS 574
Query: 521 KLLASNKLESAYNLFRKI 538
+ L+ AY LFR++
Sbjct: 575 GFANNGDLKGAYQLFRRM 592
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 193/444 (43%), Gaps = 72/444 (16%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++N+ ++ L R+ ++L + +EG+ PD+ T + ++ + V +A + L +L
Sbjct: 253 TFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKL 312
Query: 225 EDFGLKFDAESLNVVL------------------------------WC-----LCQRLHV 249
+ GL+ D + N ++ +C LCQ +
Sbjct: 313 VNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEI 372
Query: 250 GAASSLFNSMKGK------VLFNVM------------------------------TYNIV 273
A +LFN+ GK +L+N++ TYN+V
Sbjct: 373 DRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLV 432
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
I+G K+G V + ++ + +A+G+ PD TF+ LI+G + +++ I++ + M G
Sbjct: 433 INGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGV 492
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
PD YN+V++ ++ M+ ++ M C PN TY L L K+ KV +AL+
Sbjct: 493 TPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALD 552
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK-ARKVGCKLSLTAYKLLLRRL 452
+ +E+L++GI P T + + + + G A ++++ + + Y +++
Sbjct: 553 LVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAF 612
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
+ M L+ EM G D Y +I G C G ++ + E + KGF PS
Sbjct: 613 AEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSL 672
Query: 513 LVYSKLSNKLLASNKLESAYNLFR 536
+ ++ N L +++ A ++
Sbjct: 673 TTFGRVINCLCVQHRVHEAVDIIH 696
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 128/270 (47%), Gaps = 2/270 (0%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
+ D+ +YN+++ L + N+++D +G PD+ T + ++D + + ++ IQ
Sbjct: 423 SSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQ 482
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
+L ++ G+ D + N VL L + + F +M K + N +TYNI+
Sbjct: 483 ILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLC 542
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK-GCGPDT 337
K G+V E ++ EI+ +G +PD+++F+ +I G G + A ++F M E+ T
Sbjct: 543 KAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTT 602
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I+ + D K + M + C P+ TY +I G + + E
Sbjct: 603 ATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLE 662
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
M+++G +PS T + LC H A+
Sbjct: 663 MIEKGFIPSLTTFGRVINCLCVQHRVHEAV 692
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 146/309 (47%), Gaps = 2/309 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN+++K L + ++++M++ G + D+ T ++V++ + G V A ++
Sbjct: 394 YNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAI 453
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVV 284
G D + N ++ C++L + + N M V +V+TYN V++G SK +
Sbjct: 454 AKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNE 513
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
++ + +V +G P+ +T++ L E L +AG++++A+++ D + KG PDT ++ +I
Sbjct: 514 DLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATII 573
Query: 345 SNYISVGDFDECMKYYKGMS-SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
S + + GD + ++ M Y TY +I+ + + ++F EM G
Sbjct: 574 SGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGC 633
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P T T ++ C G + + + G SLT + ++ L + +D
Sbjct: 634 APDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVD 693
Query: 464 LWHEMQESG 472
+ H M +G
Sbjct: 694 IIHFMVHNG 702
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 138/359 (38%), Gaps = 77/359 (21%)
Query: 252 ASSLFNSMKGKVLF--NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A +FN +K + F +++TY +I G V ME VL E + +SL I
Sbjct: 23 ALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMD--IDNSLLEGVYI 80
Query: 310 EGL---GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY------ 360
+ GR G++ +A++VF+ M C P +YNA+++ + G F + K +
Sbjct: 81 GAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNV 140
Query: 361 -----------------------------KGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
M S C+ N Y +++G + +A
Sbjct: 141 GIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEA 200
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
E+F +ML GI P T L LC G + + K K G +L + + ++
Sbjct: 201 YELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQG 260
Query: 452 LSGFGK---------------------------CGMLLD--------LWHEMQESGYPSD 476
L G CG+ + H++ G D
Sbjct: 261 LCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPD 320
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
G Y +I G C +G L+NA +++ ++ KGF P Y L N L +++++ A LF
Sbjct: 321 GFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALF 379
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN++ ++L + + +++ ++ +G+ PD + + ++ F G + A Q+ R+
Sbjct: 533 TYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRM 592
Query: 225 -EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQ 282
E + + + N+++ ++L + LF M G + TY ++I G+ G
Sbjct: 593 GEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGN 652
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ L E++ +GF P TF +I L R+ +A+++ M G P+
Sbjct: 653 TDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPE 706
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 181/379 (47%), Gaps = 1/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN IV + R ++L M + V D+ T S ++DS R G + AI +
Sbjct: 182 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 241
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+E G+K + N ++ LC+ + L M + ++ NV+T+N+++ + K
Sbjct: 242 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 301
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ E + KE++ G SP+ +T++ L++G R+ +A + D M C PD +
Sbjct: 302 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 361
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++I Y V D+ MK ++ +S N TY+ L+ G +S K+ A E+F+EM+
Sbjct: 362 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 421
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G++P T L+ LC G A+ +++ +K L + Y ++ + GK
Sbjct: 422 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 481
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+L+ + G + Y +I+GLC G L A +++ + G P+ Y+ L
Sbjct: 482 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 541
Query: 521 KLLASNKLESAYNLFRKIK 539
L L ++ L ++K
Sbjct: 542 AHLRDGDLTASAKLIEEMK 560
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 163/341 (47%), Gaps = 3/341 (0%)
Query: 145 AMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIV 204
A+ LF K + V +YN +V+ L + ++ +L DM + P++ T +++
Sbjct: 237 AISLFKEMETK--GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 294
Query: 205 MDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKV 263
+D F++ G++ +A ++ + G+ + + N ++ C + + A+++ + M + K
Sbjct: 295 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 354
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+++T+ +I G+ + +V + +V + I G +++T+S L++G ++G+I A E
Sbjct: 355 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 414
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+F M G PD Y ++ G ++ ++ ++ + + + YT +I G+
Sbjct: 415 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 474
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
K KV DA +F + +G+ P+ T T + LC G A ++ +K + G +
Sbjct: 475 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 534
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
Y L+R G L EM+ G+ +D + VI
Sbjct: 535 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 575
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 164/385 (42%), Gaps = 36/385 (9%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ---------- 245
P L S + R Q + +LE G+ + +LN+++ C C+
Sbjct: 76 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 135
Query: 246 -----RLHVGAASSLFNS------MKGKV---------------LFNVMTYNIVISGWSK 279
+L ++ FN+ ++GKV +V+TYN +++G +
Sbjct: 136 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 195
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G +L+++ D T+S +I+ L R G ID AI +F M+ KG
Sbjct: 196 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 255
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YN+++ G +++ K M S PN+ T+ L+ +K K+ +A E+++EM+
Sbjct: 256 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 315
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
RGI P+ T + ++ C A M + C + + L++ +
Sbjct: 316 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 375
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ ++ + + G ++ Y ++ G C G+++ A + +E + G P + Y L
Sbjct: 376 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 435
Query: 520 NKLLASNKLESAYNLFRKIKIARQN 544
+ L + KLE A +F ++ ++ +
Sbjct: 436 DGLCDNGKLEKALEIFEDLQKSKMD 460
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 142/296 (47%), Gaps = 3/296 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +V ++NV++ + + +M G++P++ T + +MD + ++ +A
Sbjct: 284 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 343
Query: 219 QMLGRLEDFGLKFDAESLNVVL--WCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISG 276
ML + D + ++ +C+ +R+ G N K ++ N +TY+I++ G
Sbjct: 344 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM-KVFRNISKRGLVANAVTYSILVQG 402
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ + G++ E + +E+V+ G PD +T+ L++GL G+++ A+E+F+ +++
Sbjct: 403 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 462
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y +I G ++ + + +PN+ TYT +ISGL K +++A +
Sbjct: 463 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 522
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+M + G P+ T + + G A+ + ++ + G ++ K+++ L
Sbjct: 523 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 578
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 118/262 (45%), Gaps = 1/262 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ ++ +YN ++ + N+L M + +PD+ T + ++ + +V +
Sbjct: 319 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 378
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ + GL +A + ++++ CQ + A LF M VL +VMTY I++ G
Sbjct: 379 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 438
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
G++ + + +++ + ++ +IEG+ + G+++DA +F ++ KG P+
Sbjct: 439 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 498
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +IS G E + M PN TY LI L+ + + ++ EE
Sbjct: 499 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 558
Query: 398 MLDRGIVPSTGTITSFLEPLCS 419
M G +I ++ L S
Sbjct: 559 MKSCGFSADASSIKMVIDMLLS 580
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 132/302 (43%), Gaps = 8/302 (2%)
Query: 242 CLCQRLHVGA-------ASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
C +RL G A +LF M + + L +++ ++ S ++ Q + K++
Sbjct: 45 CFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQL 104
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
G + + T + +I R + A V + + G PDT +N +I G
Sbjct: 105 ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKV 164
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
E + M C+P++ TY +++G+ +S + AL++ +M +R + T ++
Sbjct: 165 SEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTI 224
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
++ LC G AA+ ++K+ G K S+ Y L+R L GK L +M
Sbjct: 225 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 284
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
+ + ++ G+L+ A + +E + +G P+ + Y+ L + N+L A N
Sbjct: 285 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 344
Query: 534 LF 535
+
Sbjct: 345 ML 346
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 107/229 (46%), Gaps = 1/229 (0%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
+ D+ ++ ++K K D V +++K G+ + T SI++ F ++G++ A +
Sbjct: 355 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 414
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWS 278
+ + G+ D + ++L LC + A +F + K K+ ++ Y +I G
Sbjct: 415 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 474
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G+V + + + +G P+ +T++ +I GL + G + +A + M+E G P+
Sbjct: 475 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 534
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
YN +I ++ GD K + M S + + +I LL + K
Sbjct: 535 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 583
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 89/211 (42%), Gaps = 7/211 (3%)
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
D+ + ++ M P++ ++R S + ++++ L+ +++ GI + T+
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
+ C A + K K+G + T + L++ L GK + L M E+G
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
D Y ++ G+C G A+ ++ + + YS + + L +++A +
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 239
Query: 534 LFRKIK-------IARQNDYARRLWRSKGWH 557
LF++++ + N R L ++ W+
Sbjct: 240 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 270
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
VV E + KE++ G +P+++T+S LI+G + R+D+A ++ D M KG
Sbjct: 715 VVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 187/395 (47%), Gaps = 2/395 (0%)
Query: 147 VLFFNW-AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
V+ + W ++ + ++ + N+++ R + L M K G PD+ T ++
Sbjct: 99 VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLL 158
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVL 264
+ F R ++Y A+ M R+ + G + + N ++ LC+ V A L N M+ +
Sbjct: 159 NGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIR 218
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+ +TYN +ISG G+ + R++ + PD TF+ LI+ + GRI +A E+
Sbjct: 219 PDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEEL 278
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
++ M + PD Y+ +I DE + + M S C P++ TY+ LI+G K
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
S+KV +++F EM RG+V +T T T ++ C G + A ++K G ++
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIIT 398
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y +LL L GK L + +MQ+SG +D Y +I G+C G++ +A +
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLN 458
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
KG P Y+ + L A LFRK+K
Sbjct: 459 LKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMK 493
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 101/225 (44%)
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
R ++DD++++F M + P ++ ++S + +D + ++ M N+
Sbjct: 58 RYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLC 117
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
T L++ + +++ AL +M+ G P T S L C + A+ M+ +
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRM 177
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
++G + ++ Y ++ L + LDL + M+ G D Y +I+GLCN G+
Sbjct: 178 VEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRW 237
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++A ++ ++ P ++ L + + ++ A L+ ++
Sbjct: 238 DDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEM 282
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 6/195 (3%)
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y ++ N I D+ + + M P++ ++RL+S + K +K + ++E+M
Sbjct: 49 YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
GI + T L C A+ K K+G + + + LL +GF +
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLL---NGFCRGD 165
Query: 460 MLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ D ++ M E GY + IY +I GLC Q++NA+ ++ G P + Y+
Sbjct: 166 RIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYN 225
Query: 517 KLSNKLLASNKLESA 531
L + L S + + A
Sbjct: 226 SLISGLCNSGRWDDA 240
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V ++ +Y V+++ R + + M GV P++ T ++++ G++ KA+
Sbjct: 357 VVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKAL 416
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+L ++ G+ D + N+++ +C+ V A L+ S+ K L ++ TY ++ G
Sbjct: 417 VILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGL 476
Query: 278 SKLGQVVEMERVLKEIVAEGFSPD 301
K G E + + +++ +G P+
Sbjct: 477 YKKGLRGEADALFRKMKEDGILPN 500
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/166 (16%), Positives = 79/166 (47%)
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y ++ ++ K+ D+L++F M+ +PS + L + + ++++ +
Sbjct: 49 YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
+G +L +LL + + L +M + G+ D + ++ G C ++
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIY 168
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+A+ + + + G+ P+ ++Y+ + + L S ++++A +L ++++
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEV 214
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 181/381 (47%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ DV +Y+ I+ AL + + D VL+ M K GV P+ T + ++ + + Q +AI
Sbjct: 227 ISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAI 286
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
L ++ G++ D + N ++ LC+ A +F+SM + L ++ TY ++ G+
Sbjct: 287 GFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGY 346
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G +VEM +L +V G PD F+ LI + ++D+A+ VF M++ G P+
Sbjct: 347 ATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNV 406
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y AVI G D+ M Y++ M PN+ YT LI L K A E+ E
Sbjct: 407 VTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILE 466
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
MLDRGI +T S + C G + ++ ++G K ++ Y L+ GK
Sbjct: 467 MLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGK 526
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L M G D Y +I G C + ++++A+ + +E + G P+ + Y+
Sbjct: 527 MDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 586
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ L + + +A L+ I
Sbjct: 587 ILQGLFHTRRTAAAKELYVGI 607
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 152/340 (44%), Gaps = 5/340 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HP D +N+++ A +++ D V S M + G+NP++ T V+ ++G V
Sbjct: 368 HP----DHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVD 423
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
A+ ++ D GL + ++ LC A L M + + N + +N +I
Sbjct: 424 DAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSII 483
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
K G+V+E E++ +V G P+ +T+S LI+G AG++D+A ++ +M G
Sbjct: 484 HSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMK 543
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN +I+ Y V D+ + +K M S PN+ TY ++ GL +R+ A A E+
Sbjct: 544 PDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 603
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ + G T L LC A+ M++ +L + +++ L
Sbjct: 604 YVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 663
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G+ DL+ +G + Y + + G LE
Sbjct: 664 VGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 139/312 (44%), Gaps = 7/312 (2%)
Query: 234 ESLNVVLWCLCQ--RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE-MERVL 290
+ +++ C C+ RL +G A+ L N +K +T+ ++ G + + M+ VL
Sbjct: 88 HTYGILIGCCCRAGRLDLGFAA-LGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVL 146
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK---GCGPDTNAYNAVISNY 347
+ + PD + + L++GL R +A+E+ M + G PD +Y VI+ +
Sbjct: 147 RRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGF 206
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
GD D+ Y M P++ TY+ +I+ L K + + A+EV M+ G++P+
Sbjct: 207 FKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNC 266
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T S L CS P A+ KK R G + + Y L+ L G+ ++
Sbjct: 267 MTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDS 326
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
M + G D Y ++ G G L +++ +R G P V++ L K
Sbjct: 327 MTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEK 386
Query: 528 LESAYNLFRKIK 539
++ A +F K++
Sbjct: 387 VDEAMLVFSKMR 398
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 155/343 (45%), Gaps = 15/343 (4%)
Query: 154 IKHPNVAKDVKSYNVIVKAL---GR----RKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
++ V DV +YN ++ L GR RK FD M K G+ PD+ T ++
Sbjct: 292 MRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFD-------SMTKRGLEPDIATYCTLLQ 344
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF- 265
+ G + + +L + G+ D N+++ ++ V A +F+ M+ L
Sbjct: 345 GYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNP 404
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
NV+TY VI K G V + ++++ EG +P+ + ++ LI L + D A E+
Sbjct: 405 NVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELI 464
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
M ++G +T +N++I ++ G E K + M +PN+ TY+ LI G +
Sbjct: 465 LEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLA 524
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
K+ +A ++ M G+ P T + + C A+ ++K+ G ++ Y
Sbjct: 525 GKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITY 584
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++L+ L + +L+ + +SG + Y ++ GLC
Sbjct: 585 NIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLC 627
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 157/354 (44%), Gaps = 3/354 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EAM++F ++ + +V +Y ++ L + D M EG+ P++ +
Sbjct: 389 EAMLVF--SKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTS 446
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
++ S + KA +++ + D G+ + N ++ C+ V + LF+ M +
Sbjct: 447 LIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIG 506
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
V NV+TY+ +I G+ G++ E ++L + + G PD +T++ LI G R R+DDA+
Sbjct: 507 VKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDAL 566
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+F M G P+ YN ++ + Y G++ + + TY ++ GL
Sbjct: 567 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGL 626
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K+ +AL +F+ + + T T + L G A ++ G +
Sbjct: 627 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNY 686
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
Y+L+ + G G L L+ M+++G D + +++ L G++ A
Sbjct: 687 WTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 161/390 (41%), Gaps = 43/390 (11%)
Query: 189 MAKEG---VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
MA+ G V P + T I++ RAG++ LG + G + +A + +L LC
Sbjct: 75 MARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCA 134
Query: 246 RLHVGAASSLF--NSMKGKVLFNVMTYNIVISGW---SKLGQVVEMERVLKEIVAEGFSP 300
A + + + +V + I++ G ++ + +E+ ++ + G +P
Sbjct: 135 DKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAP 194
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
D ++++ +I G + G D A + M ++ PD Y+++I+ D+ M+
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVL 254
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
M PN TY ++ G S + +A+ ++M G+ P T S ++ LC
Sbjct: 255 TTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKN 314
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG---KCGMLLDL------------- 464
G A ++ K G + + Y LL+ + G + LLDL
Sbjct: 315 GRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVF 374
Query: 465 -------------------WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+ +M++ G + Y VI LC G +++A+L E+ +
Sbjct: 375 NILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMID 434
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+G P+ +VY+ L + L +K + A L
Sbjct: 435 EGLTPNIIVYTSLIHSLCIFDKWDKAEELI 464
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 88/199 (44%), Gaps = 1/199 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN ++ R D + +M GV+P++ T +I++ + A ++
Sbjct: 545 DCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELY 604
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
+ G + + + N++L LC+ A +F ++ + T+NI+I K+
Sbjct: 605 VGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKV 664
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ E + + + G P+ T+ + E + G +++ ++F +M++ GC D+
Sbjct: 665 GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGML 724
Query: 341 NAVISNYISVGDFDECMKY 359
N ++ + G+ Y
Sbjct: 725 NFIVRELLQRGEITRAGTY 743
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 75/174 (43%), Gaps = 1/174 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+ ++ +YN+I++ L + + + K G +L T +I++ + +A+
Sbjct: 577 VSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEAL 636
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+M L L+ + + N+++ L + A LF + L N TY ++
Sbjct: 637 RMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENI 696
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
G + E++++ + G + DS +F++ L + G I A + EK
Sbjct: 697 IGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 750
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 181/360 (50%), Gaps = 4/360 (1%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
++++ M + G+ PD+ + ++DS + G V A+ + ++E++G++ D ++ L
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 244 CQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C A SL M K K+ +V+T+N +I + K G+ ++ E + E++ +P+
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
T++ LI G G +D+A ++F M+ KGC PD AY ++I+ + D+ MK +
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
MS N TYT LI G + K A EVF M+ RG+ P+ T L LC G
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 423 PHAAMMMYKKARKV---GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
A+M+++ +K G ++ Y +LL L GK L ++ +M++
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT 462
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y +I G+C G+++NAV + KG P+ + Y+ + + L A+ LFRK+K
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 192/381 (50%), Gaps = 4/381 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+ D+ + N+++ + + L M K G PD+ T + +++ F ++ +A+
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGW 277
M+ ++ + G+K D ++ LC+ HV A SLF+ M+ + +V+ Y +++G
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
G+ + + +L+ + PD +TF+ LI+ + G+ DA E+++ M P+
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y ++I+ + G DE + + M + C P++ YT LI+G K +KV DA+++F E
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M +G+ +T T T+ ++ G P+ A ++ G ++ Y +LL L GK
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 458 CGMLLDLWHEMQE---SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
L ++ +MQ+ G + Y ++ GLC G+LE A++V E+ ++ +
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT 462
Query: 515 YSKLSNKLLASNKLESAYNLF 535
Y+ + + + K+++A NLF
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLF 483
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 175/373 (46%), Gaps = 9/373 (2%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
++ + M + P + + +++ + + I + L+ G+ D + N+++ C
Sbjct: 58 DLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCF 117
Query: 244 CQRLHVGAASSLFNSMKGKVLF--NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
CQ ASS M K+ F +++T+ +I+G+ ++ E ++ ++V G PD
Sbjct: 118 CQSSQPYLASSFLGKMM-KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPD 176
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+ ++ +I+ L + G ++ A+ +FD M+ G PD Y ++++ + G + + +
Sbjct: 177 VVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLR 236
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
GM+ +P++ T+ LI +K K DA E++ EM+ I P+ T TS + C G
Sbjct: 237 GMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEG 296
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGE 478
A M+ GC + AY L ++GF KC + D +++EM + G +
Sbjct: 297 CVDEARQMFYLMETKGCFPDVVAYTSL---INGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y +I G +G+ A V + +G P+ Y+ L + L + K++ A +F +
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Query: 539 KIARQNDYARRLW 551
+ + A +W
Sbjct: 414 QKREMDGVAPNIW 426
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 156/324 (48%), Gaps = 16/324 (4%)
Query: 159 VAKDVKSYNVIVKAL---GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
+ DV Y +V L GR + D ++L M K + PD+ T + ++D+F++ G+
Sbjct: 208 IRPDVVMYTSLVNGLCNSGRWRDAD---SLLRGMTKRKIKPDVITFNALIDAFVKEGKFL 264
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVI 274
A ++ + + + + ++ C V A +F M+ K F +V+ Y +I
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G+ K +V + ++ E+ +G + +++T++ LI+G G+ G+ + A EVF M +G
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE---PNMDTYTRLISGLLKSRKVADA 391
P+ YN ++ G + + ++ M + PN+ TY L+ GL + K+ A
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
L VFE+M R + T T ++ +C G A+ ++ G K ++ Y +
Sbjct: 445 LMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTM--- 501
Query: 452 LSGFGKCGMLLD---LWHEMQESG 472
+SG + G+ + L+ +M+E G
Sbjct: 502 ISGLFREGLKHEAHVLFRKMKEDG 525
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 82/197 (41%)
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y ++ N + F+E + + M P++ +T+L++ + K +K + + + +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
G+ T + C P+ A K K+G + + + L+ +
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ + ++M E G D +Y +I LC G + A+ + ++ G P ++Y+ L
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 520 NKLLASNKLESAYNLFR 536
N L S + A +L R
Sbjct: 220 NGLCNSGRWRDADSLLR 236
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 70/145 (48%), Gaps = 4/145 (2%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAK---EGVNPDLETLSIVMDSFIRAGQVY 215
V ++++YNV++ L + DM K +GV P++ T ++++ G++
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLE 442
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
KA+ + + + + +++ +C+ V A +LF S+ K V NV+TY +I
Sbjct: 443 KALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFS 299
SG + G E + +++ +G S
Sbjct: 503 SGLFREGLKHEAHVLFRKMKEDGVS 527
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 194/411 (47%), Gaps = 4/411 (0%)
Query: 130 DVVGKVVNRGNLSGEAMVLFFNWAIKHP-NVAKDVKSYNVIVKALGRRKFFDFMCNVLSD 188
++V V+ R G + FF++ H D S+++ + R + +++
Sbjct: 57 NLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHR 116
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + P +T +IV + + AG+ KA+++ + + G D S N +L LC+
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 249 VGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
V A LF +++G+ + +TYN++++GW + + + VLKE+V G +P+ T++ +
Sbjct: 177 VEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTM 236
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
++G RAG+I A E F MK++ C D Y V+ + G+ + M
Sbjct: 237 LKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGV 296
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P++ TY +I L K V +A+ +FEEM+ RG P+ T + L G
Sbjct: 297 LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEE 356
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ ++ GC+ + Y +++R S + L L+ +M + + Y +I+G+
Sbjct: 357 LMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMF 416
Query: 489 NIGQLENAVL---VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
+ E+ V+ ++ E + +GF P + ++++ N LL + A + R
Sbjct: 417 VRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILR 467
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 4/283 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YNVI+ K VL +M + G+NP+L T + ++ F RAGQ+ A +
Sbjct: 194 DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFF 253
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
++ + D + V+ + A ++F+ M + VL +V TYN +I K
Sbjct: 254 LEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKK 313
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
V + +E+V G+ P+ T++ LI GL AG E+ M+ +GC P+ Y
Sbjct: 314 DNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTY 373
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD---ALEVFEE 397
N +I Y + ++ + ++ M S +C PN+DTY LISG+ ++ D A ++ E
Sbjct: 374 NMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLE 433
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
M++RG +P T L L G A + + K G +L
Sbjct: 434 MVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKSGSRL 476
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 114/243 (46%), Gaps = 7/243 (2%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P TF+ + E AG+ D A+++F M E GC D ++N ++ ++ +
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
++ + + TY +++G ++ ALEV +EM++RGI P+ T + L+
Sbjct: 184 FRALRG-RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR 242
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSD 476
G A + + +K C++ + Y ++ GFG G + +++ EM G
Sbjct: 243 AGQIRHAWEFFLEMKKRDCEIDVVTYTTVVH---GFGVAGEIKRARNVFDEMIREGVLPS 299
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
Y +I LC +ENAV++ EE +R+G+ P+ Y+ L L + + L +
Sbjct: 300 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359
Query: 537 KIK 539
+++
Sbjct: 360 RME 362
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 146/327 (44%), Gaps = 6/327 (1%)
Query: 216 KAIQMLGRLEDFGLKF--DAESLNVVLWCLCQRLHVGAAS-SLFNSMKG-KVLFNVMTYN 271
KA+Q L++ ++ DA S ++ + + RLH+ SL + M+ ++ + T+
Sbjct: 72 KALQFFHFLDNHHREYVHDASSFDLAI-DIAARLHLHPTVWSLIHRMRSLRIGPSPKTFA 130
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
IV ++ G+ + ++ + G D +F+ +++ L ++ R++ A E+F ++ +
Sbjct: 131 IVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR 190
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
DT YN +++ + + + ++ K M PN+ TY ++ G ++ ++ A
Sbjct: 191 -FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHA 249
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
E F EM R T T+ + G A ++ + + G S+ Y +++
Sbjct: 250 WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQV 309
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L + ++ EM GY + Y +I GL + G+ +M+ +G P+
Sbjct: 310 LCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 369
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
Y+ + +++E A LF K+
Sbjct: 370 FQTYNMMIRYYSECSEVEKALGLFEKM 396
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 88/178 (49%), Gaps = 4/178 (2%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V V +YN +++ L ++ + + +M + G P++ T ++++ AG+ +
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE 355
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+++ R+E+ G + + ++ N+++ + V A LF M G L N+ TYNI+ISG
Sbjct: 356 ELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Query: 278 ---SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+ +V ++L E+V GF P TF+ ++ GL G A E+ + G
Sbjct: 416 FVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKSG 473
>gi|242063152|ref|XP_002452865.1| hypothetical protein SORBIDRAFT_04g033840 [Sorghum bicolor]
gi|241932696|gb|EES05841.1| hypothetical protein SORBIDRAFT_04g033840 [Sorghum bicolor]
Length = 551
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 205/445 (46%), Gaps = 21/445 (4%)
Query: 117 EDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRR 176
E AL + +L+ +V V++R + FF WA + + +YN I+ L
Sbjct: 96 EAALDALGTELTTPLVADVLHRLRYEEKLAFRFFAWASHQDGYSHESATYNDIIDILSGT 155
Query: 177 KF----FDFMCNVLSDMAKEGVNP-DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF 231
++ F +CNVL M + G +E L ++ ++ + ++ L + L+
Sbjct: 156 RYKSRQFGVLCNVLDHMKRHGTRSVPVEDLLEILRAYTEKHLTH--MRKLAKKRRVRLRT 213
Query: 232 DAES--LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERV 289
E+ LNV+L C+ V A ++F +K ++L N TY+I+ GW + + +V
Sbjct: 214 PPETDALNVLLDAFCKCGMVKEAEAVFGRVKRRLLGNAETYSILFFGWCRARDPKKAMKV 273
Query: 290 LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC---GPDTNAYNAVISN 346
L+E++ +P+S T+ IE AG + +A E+F+ M+ +G P Y+ +I
Sbjct: 274 LEEMIQMKHTPESFTYIAAIESFCSAGLVSEARELFEFMRTEGSTISSPTAKTYSIMIVA 333
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
+EC + M S C P++ TY LI G+ K+ A V EEM G P
Sbjct: 334 LAKADRMEECFELLSDMRSCGCMPDVSTYKELIEGMCLVGKLDAAYRVLEEMGRAGFPPD 393
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
T FL LCS A+ + ++ + C+ S+ Y +L+ G+ LD+W
Sbjct: 394 IVTYNCFLNVLCSLRKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMGEAHRALDIWL 453
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
EM G + YE +I GL + G+ E+A +++E + + +L Y K +L
Sbjct: 454 EMDTRGCQRAIDTYEIMIDGLFDCGKTEHATSLLDEVINRDM---KLSYKKFDAIML--- 507
Query: 527 KLESAYNLFRKIKIARQNDYARRLW 551
+L + +L I R +++ RR +
Sbjct: 508 RLSAVGDLG---AIHRLSEHMRRFY 529
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 196/396 (49%), Gaps = 8/396 (2%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F+ ++ VA DV +Y++++ L + D +V M +EG+ P L ++ S
Sbjct: 620 LFDEMVRKGCVA-DVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSL 678
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNV 267
++ ++ A+Q+ L++ L D N+++ L + V A L +SMK + +L ++
Sbjct: 679 VKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDL 738
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
TY ++ G K G++ E + ++ EG PD + ++ L++ LG+ G++ A+ +F
Sbjct: 739 FTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRA 798
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M +K C PD Y+++I + G +E +++ S C PN+ Y+ LI K
Sbjct: 799 MAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGM 858
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
V ALE+FEEM R P+ T + L L G + A + ++ KVGC L Y +
Sbjct: 859 VDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNI 918
Query: 448 LLRRLSGFGKCGMLLDL---WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
L + G GK GM+ + + M+E G D + +I L + +L A + +
Sbjct: 919 L---IDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSME 975
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+G+ PS + Y+ L + L + K+ A +F ++K+
Sbjct: 976 EEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKV 1011
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 186/409 (45%), Gaps = 36/409 (8%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +Y +V LG+ D ++L +M K+G P + T S +M SF + Q +++ +
Sbjct: 563 VVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFD 622
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-------------------- 262
+ G D + ++V+ CLC+ V A +F MK +
Sbjct: 623 EMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDE 682
Query: 263 ------VLFN----------VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
+FN YNI+++G K +V E +++ + + PD T++
Sbjct: 683 KIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYT 742
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
L++GLG++GR+++A +F M E+G PD AY +++ G + ++ M+
Sbjct: 743 SLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKK 802
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
C P++ TY+ LI L K +V +A FE + +G P+ G +S ++ G A
Sbjct: 803 RCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRA 862
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ ++++ ++ C ++ Y LL L+ G+ + L EM++ G D Y +I G
Sbjct: 863 LELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDG 922
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ +G ++ A + KG P + ++ L L +KL A LF
Sbjct: 923 VGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELF 971
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 206/456 (45%), Gaps = 37/456 (8%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E + +N L DVV VN+ +L FF WA + + V +Y +++K L
Sbjct: 140 LERLKFKLNPGLVCDVV---VNQKDL--HLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAG 194
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ D + +L+ M KEG + L+ ++ +F V A+++ +++ FG
Sbjct: 195 AQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNM 254
Query: 236 LNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
N VL L + +A +F + + ++ + T+ I + +++ G++ ++E++
Sbjct: 255 YNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMI 314
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
G P TF+ LI+ L ++G ID+A + F+ MK C P+ Y +++ G +
Sbjct: 315 KSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLE 374
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E + + M NC P+ Y LI GL K+ + A +F+EM DRG+VP+ T +
Sbjct: 375 EACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMI 434
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG-- 472
L G A ++ ++ G + Y L+ L G+ +L + EM E G
Sbjct: 435 SVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGE 494
Query: 473 -----------------------YP-----SDGEI-YEYVIAGLCNIGQLENAVLVMEES 503
YP S GEI Y +++ + G ++ AV ++E
Sbjct: 495 CIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVM 554
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ P+ + Y+ L + L + +L+ A +L R+++
Sbjct: 555 KKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREME 590
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 183/386 (47%), Gaps = 5/386 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K N + D +YN ++ LG+ D C + +M G+ P+L T +I++ +AG+
Sbjct: 383 MKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGR 442
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
+A Q+ L++ G D + N ++ L + + ++ M K +++ +
Sbjct: 443 QPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRD-- 500
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGF-SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
S G + +R + E + GF S +T++ L+ G +D+A+++ + MK+
Sbjct: 501 -SNAGHEGTIEGADRTV-EYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHE 558
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
C P Y ++ G DE + + M CEP++ TY+ L++ K + ++L
Sbjct: 559 CIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESL 618
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+F+EM+ +G V T + + LC A+ ++ + ++ G + L YK LL L
Sbjct: 619 SLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSL 678
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
K L +++E+QES D +Y ++ GL +++ A +++ + P
Sbjct: 679 VKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDL 738
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKI 538
Y+ L + L S +LE A+N+F K+
Sbjct: 739 FTYTSLLDGLGKSGRLEEAFNMFTKM 764
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 176/372 (47%), Gaps = 19/372 (5%)
Query: 124 NVDLSLDVVGKVVNRG--NLSGEAMVLF---------------FNWAIKHPNVAKDVKSY 166
+VD +LDV G++ G L G L FN ++ ++ D Y
Sbjct: 648 DVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFN-ELQESSLVPDTFVY 706
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
N++V L + D C ++ M + + PDL T + ++D ++G++ +A M ++ +
Sbjct: 707 NIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTE 766
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVE 285
G + D + ++ L + + A +F +M K + + +V+TY+ +I K G+V E
Sbjct: 767 EGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEE 826
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+ +++G +P+ +S LI+ G+ G +D A+E+F+ M+ + C P+ YN ++S
Sbjct: 827 AYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLS 886
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
G + K + M C P++ TY LI G+ K V +A F+ M ++GIVP
Sbjct: 887 GLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVP 946
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
T TS +E L A ++ + G S+ Y +L+ L GK ++
Sbjct: 947 DVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIF 1006
Query: 466 HEMQESGYPSDG 477
HEM+ G DG
Sbjct: 1007 HEMKVKGCMPDG 1018
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 211/468 (45%), Gaps = 42/468 (8%)
Query: 104 GVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDV 163
G+F +++K +G++ + L N+ +S V+ + EA LF + +K DV
Sbjct: 413 GLF-KEMKDRGLVPN-LRTYNIMIS------VLGKAGRQPEAWQLFHD--LKEQGAVPDV 462
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAK-------------------EGVNPDLE----- 199
+YN ++ LG+ D + ++ +M + EG + +E
Sbjct: 463 FTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLG 522
Query: 200 -------TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
T + +M +FI G V +A+++L ++ + ++ L + + A
Sbjct: 523 FKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEA 582
Query: 253 SSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
SL M K +V+TY+ +++ + K Q E + E+V +G D T+S +I
Sbjct: 583 VSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINC 642
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
L ++ +D A++VF MKE+G P Y ++S+ + D ++ + + + P+
Sbjct: 643 LCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPD 702
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
Y +++GL+KS +V +A ++ + M ++ I+P T TS L+ L G A M+
Sbjct: 703 TFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFT 762
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
K + G + + AY L+ L GK L ++ M + D Y +I L G
Sbjct: 763 KMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEG 822
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++E A E S+ KG P+ VYS L + ++ A LF +++
Sbjct: 823 RVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQ 870
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y ++ LG+ + MAK+ PD+ T S ++DS + G+V +A
Sbjct: 772 DVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFF 831
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
G + + ++ ++ V A LF M+ + N++TYN ++SG +K
Sbjct: 832 ENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKA 891
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ E++L+E+ G PD +T++ LI+G+G+ G +D+A F MKEKG PD +
Sbjct: 892 GRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITF 951
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++I + V E + + M P++ TY LI L ++ KV +A +F EM
Sbjct: 952 TSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKV 1011
Query: 401 RGIVPSTGTI 410
+G +P TI
Sbjct: 1012 KGCMPDGITI 1021
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PN+ +YN ++ L + + +L +M K G PDL T +I++D + G V +
Sbjct: 876 PNIV----TYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDE 931
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN--VMTYNIVI 274
A R+++ G+ D + ++ L + + A LF+SM+ + +N V+TYN++I
Sbjct: 932 AESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEG-YNPSVVTYNVLI 990
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
+ G+V E + E+ +G PD +T +
Sbjct: 991 DILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L++++ G + D V ++ +D VGK+ + EA F +K + DV +
Sbjct: 900 LLEEMEKVGCVPDL---VTYNILIDGVGKM----GMVDEAESYF--KRMKEKGIVPDVIT 950
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
+ ++++LG+ C + M +EG NP + T ++++D RAG+V++A + ++
Sbjct: 951 FTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMK 1010
Query: 226 DFGLKFDAESLNVVLWCLCQR 246
G D ++ ++ L R
Sbjct: 1011 VKGCMPDGITIGIMKRILSVR 1031
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 196/438 (44%), Gaps = 50/438 (11%)
Query: 155 KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV 214
K PNV +YN+++KAL + D C +L +M+ +G PD+ + + V+ S + G+V
Sbjct: 180 KEPNVY----TYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKV 235
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIV 273
+A ++ R + + N ++ C+ V L M K + NV+TY+ V
Sbjct: 236 EEARELSIRFQP-----NVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTV 290
Query: 274 ISG-------------WSKL----------------------GQVVEMERVLKEIVAEGF 298
IS W+K+ G+V+E + + EGF
Sbjct: 291 ISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGF 350
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
P+ + ++ LI GL G++ +A+ V M+ GC P+ + Y A+I + GD +
Sbjct: 351 EPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASE 410
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
+ M + C PN+ YT +++ L +S + A + E+M P+T T +F++ LC
Sbjct: 411 IWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLC 470
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
G A+ ++ + + GC ++ Y +L L + L+L EM+E G +
Sbjct: 471 CSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLV 530
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y + G CN+G+ E A+ ++ + L G P + Y+ L+ K+++A L K+
Sbjct: 531 TYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKL 590
Query: 539 K-----IARQNDYARRLW 551
+ Y LW
Sbjct: 591 SAGGKWVPEVAAYTSLLW 608
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 187/414 (45%), Gaps = 47/414 (11%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y ++++ LGR D + +L M EG++ + V++++ R G +A++M R+
Sbjct: 81 TYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRI 140
Query: 225 EDFG------------------------------LKFDAE-----SLNVVLWCLCQRLHV 249
+FG +K D + + N++L LC+ V
Sbjct: 141 REFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRV 200
Query: 250 GAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
A L M K +V++Y VIS SKLG+V E ++ F P+ ++ L
Sbjct: 201 DGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARE-----LSIRFQPNVSVYNAL 255
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I G R ++ + + M EKG P+ Y+ VIS+ +G+ + + + M C
Sbjct: 256 INGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGC 315
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
PN+ T+T L+ G +V +AL ++ M + G P+ + + LCS+G A+
Sbjct: 316 SPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVS 375
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL---DLWHEMQESGYPSDGEIYEYVIA 485
+ K + GC +++ Y L + GF K G L+ ++W++M +G + +Y ++
Sbjct: 376 VSSKMERNGCSPNVSTYGAL---IDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVN 432
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
LC A ++E+ P+ + ++ L S ++E A NLF +++
Sbjct: 433 VLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQME 486
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 169/369 (45%), Gaps = 2/369 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +V +Y+ ++ +L + V + M G +P++ T + +M + G+V +A+
Sbjct: 280 IDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEAL 339
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+ R+ + G + + + N ++ LC +G A S+ + M + NV TY +I G+
Sbjct: 340 NIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGF 399
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+K G +V + +++ G P+ + ++ ++ L R+ A + + M C P+T
Sbjct: 400 AKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNT 459
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+N I G + + + M Y C PN+ TY ++ GLLK ++ +ALE+ E
Sbjct: 460 VTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTE 519
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M ++G+ + T + C+ G A+ + K G K Y L GK
Sbjct: 520 MEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGK 579
Query: 458 CGMLLDLWHEMQESG-YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ L ++ G + + Y ++ G+CN +E AVL +++ L +G C + ++
Sbjct: 580 VKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWN 639
Query: 517 KLSNKLLAS 525
L L S
Sbjct: 640 ALVRGLFNS 648
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 128/291 (43%), Gaps = 11/291 (3%)
Query: 252 ASSLFNSMKGKVLF--NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
AS+ F S+ F +TY I+I + V ++ +L+++ EG S F +I
Sbjct: 62 ASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVI 121
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
R G + A+++F ++E GC P YN ++ +S F Y M E
Sbjct: 122 NTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKE 181
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
PN+ TY L+ L K+ +V A ++ EM ++G P + T+ + + G
Sbjct: 182 PNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGK------- 234
Query: 430 YKKARKVGCKL--SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++AR++ + +++ Y L+ K + L +M E G + Y VI+ L
Sbjct: 235 VEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSL 294
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
IG +E A+ V + +G P+ ++ L ++ A N++ ++
Sbjct: 295 SGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRM 345
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 203/459 (44%), Gaps = 38/459 (8%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+++ + V V L +V + G ++ +A+ L +K + D+ YNV + G+
Sbjct: 71 MQEVGYEVGVHLFTTLVRALAREGQVA-DALALVDE--VKGSCLEPDIVLYNVCIDCFGK 127
Query: 176 RKFFDFMCNVLSDMAKEGVNPD-------------------LETLSIVMDS--------- 207
D C ++ +G+ PD E L M++
Sbjct: 128 AGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYA 187
Query: 208 -------FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
+ AG+ A ++L RL + G S N +L CL ++ V A SLF MK
Sbjct: 188 YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK 247
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
N TYNI+I G+V E R+L E+ P+ LT + +++ L +A ++++
Sbjct: 248 KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEE 307
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A ++F++ ++GC PD Y ++I G DE + ++ M N YT LI
Sbjct: 308 AYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIR 367
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
+ D +VF+E++ RG P + ++++ + G M+++ R G
Sbjct: 368 NFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLP 427
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+ +Y +L+ L+ G+ +++H M++ G+ D Y V+ G C G++ A ++
Sbjct: 428 DVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEIL 487
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
EE K P+ Y + + L ++L+ AY LF + K
Sbjct: 488 EEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 526
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 182/416 (43%), Gaps = 36/416 (8%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++H ++ ++ + N++V L + + + + ++ G NPD T ++D + GQ
Sbjct: 280 MEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQ 339
Query: 214 VYKAIQML-------------------------GRLED----------FGLKFDAESLNV 238
V +A ++ GR ED G K D LN
Sbjct: 340 VDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNT 399
Query: 239 VLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
+ C+ + V +F ++ L +V +Y+I+I G +K GQ E + + +G
Sbjct: 400 YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG 459
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
F+ D+ ++ +++G ++G++ A E+ + MKEK P Y A++ + DE
Sbjct: 460 FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAY 519
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
++ S E N+ Y+ LI G K ++ +A + EEM+ +G+ P+ T S L+ L
Sbjct: 520 MLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDAL 579
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
+ A++ ++ +++ C + Y +L+ L K W +MQ+ G +
Sbjct: 580 VKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNV 639
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
Y +I+GL +G + +A + E G P ++ L + +N+ AY
Sbjct: 640 VTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 695
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 184/378 (48%), Gaps = 2/378 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V S+N I+ LG+++ D ++ M K+ P+ T +I++D G+V +A ++L
Sbjct: 220 VVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILD 278
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLG 281
+E L + ++N+++ LC+ + A +F S + + +TY +I G K G
Sbjct: 279 EMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKG 338
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
QV E R+ ++++ G + + + ++ LI GR +D +VF + +GC PD N
Sbjct: 339 QVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLN 398
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+ G+ ++ ++ + SY P++ +Y+ LI GL K+ + + +F M +
Sbjct: 399 TYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQ 458
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G + ++ C G H A + ++ ++ + ++ Y ++ L+ +
Sbjct: 459 GFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEA 518
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+ E + G + +Y +I G +G+++ A L++EE ++KG P+ ++ L +
Sbjct: 519 YMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDA 578
Query: 522 LLASNKLESAYNLFRKIK 539
L+ + ++ A F+ +K
Sbjct: 579 LVKAEEINEALVCFQSMK 596
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 163/377 (43%), Gaps = 37/377 (9%)
Query: 169 IVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
+ AL R + D ++ M + P ++++ + A + +A+++L ++++ G
Sbjct: 16 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 75
Query: 229 LKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEME 287
+ ++ L + V A +L + +KG L +++ YN+ I + K G V
Sbjct: 76 YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAC 135
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
+ E+ A+G PD ++++ +I L +AGR+ +A E+F M+ + P AYN +I Y
Sbjct: 136 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 195
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
S G F+ DA ++ E + +RG +PS
Sbjct: 196 GSAGRFE-----------------------------------DAYKLLERLRERGCIPSV 220
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
+ S L L A+ +++ +K + + + Y +++ L G+ + E
Sbjct: 221 VSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDE 279
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
M+ + + ++ LC +LE A + E + ++G P + Y L + L +
Sbjct: 280 MEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQ 339
Query: 528 LESAYNLFRKIKIARQN 544
++ AY LF K+ A N
Sbjct: 340 VDEAYRLFEKMLDAGHN 356
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 189/382 (49%), Gaps = 5/382 (1%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N++ +V S+N+++KA+ + D V +MA + PD+ T +MD + ++ +A
Sbjct: 167 NISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEA 226
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVIS 275
+ +L ++ G + + NV++ LC++ + + L ++M KG V N +TYN +I+
Sbjct: 227 VLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVP-NEVTYNTIIN 285
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G G++ + +L +VA P+ +T+ LI GL + GR D + + +++E+G
Sbjct: 286 GLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHA 345
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+ AY+ +IS +E M +K M C+PN+ Y+ LI GL + K+ +A E+
Sbjct: 346 NEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEIL 405
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
EM+++G P+ T +S ++ G A+ ++K+ K C + Y +L+ L
Sbjct: 406 CEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCED 465
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL--RKGFCPSRL 513
GK + +W M G D Y +I GLCN G +E + + E L P +
Sbjct: 466 GKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVV 525
Query: 514 VYSKLSNKLLASNKLESAYNLF 535
Y+ L L N + A +L
Sbjct: 526 TYNILLRALCKQNSISHAIDLL 547
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 155/340 (45%), Gaps = 4/340 (1%)
Query: 203 IVMDSFIRAGQVYKAIQMLGRLED-FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+V ++ +A KAI++ GR+ D F + S N VL + Q A + G
Sbjct: 104 LVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVG 163
Query: 262 ---KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+ NV+++N+VI KLG V V +E+ + PD T+ L++GL + RI
Sbjct: 164 GKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRI 223
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
D+A+ + D M+ +GC P + +N +I+ GD K M C PN TY +
Sbjct: 224 DEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTI 283
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I+GL K+ A+ + + M+ VP+ T + + L G + + + G
Sbjct: 284 INGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGH 343
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ AY L+ L K + LW +M E G + +Y +I GLC G+L+ A
Sbjct: 344 HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKE 403
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++ E + KG P+ YS L + + A +++++
Sbjct: 404 ILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEM 443
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 134/320 (41%), Gaps = 47/320 (14%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ L + D ++L M P+ T +++ ++ G+ + +L L
Sbjct: 279 TYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSL 338
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
E+ G + + + ++ L + A L+ M K N++ Y+ +I G + G++
Sbjct: 339 EERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKL 398
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC---------- 333
E + +L E+V +G +P++ T+S LI+G + G AI V+ M + C
Sbjct: 399 DEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVL 458
Query: 334 -------------------------GPDTNAYNAVISNYISVGDFDECMKYYKGM--SSY 366
PD AY+++I + G + +K + M
Sbjct: 459 IHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQES 518
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS-YGPPHA 425
+ +P++ TY L+ L K ++ A+++ MLDRG P T FL L PP
Sbjct: 519 DSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQD 578
Query: 426 A--------MMMYKKARKVG 437
+ ++K+ R VG
Sbjct: 579 GREFLDELVVRLHKRQRIVG 598
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 5/248 (2%)
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTM-KEKGCGPDTNAYNAVISNYISVGDFDECMKYYK-G 362
F + G+A + AIE+F M E C ++N+V++ I G F +++Y+ G
Sbjct: 102 FILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECG 161
Query: 363 MSS-YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
+ N PN+ ++ +I + K V A+EVF EM + P T + ++ LC
Sbjct: 162 VGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKED 221
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
A+++ + + GC S + +L+ L G + L M G + Y
Sbjct: 222 RIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYN 281
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI--K 539
+I GLC G+L+ AV +++ + P+ + Y L N L+ + +L + +
Sbjct: 282 TIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEER 341
Query: 540 IARQNDYA 547
N+YA
Sbjct: 342 GHHANEYA 349
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 79/395 (20%), Positives = 152/395 (38%), Gaps = 77/395 (19%)
Query: 27 STSVRSNLSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRI 86
S V ++++Y L++ K S+D H+L L + H++ Y S K
Sbjct: 306 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEE----RGHHANEYAYSTLISGLFKEE 361
Query: 87 DSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAM 146
S A+ LW K+V +G
Sbjct: 362 KSEEAM--------------------------GLWK-----------KMVEKGC------ 378
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
PN+ Y+ ++ L R D +L +M +G P+ T S ++
Sbjct: 379 ---------QPNIV----VYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIK 425
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF- 265
F + G KAI++ + + +V++ LC+ + A ++ M G+ L
Sbjct: 426 GFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRP 485
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAE--GFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+V+ Y+ +I G G V ++ E++ + PD +T++ L+ L + I AI+
Sbjct: 486 DVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAID 545
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+ ++M ++GC PD +I+ I + E + + + L+ L
Sbjct: 546 LLNSMLDRGCNPD------LITCNIFLNALREKLNPPQDGREF--------LDELVVRLH 591
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
K +++ A ++ E ML + + P+ T + LC
Sbjct: 592 KRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELC 626
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 195/401 (48%), Gaps = 2/401 (0%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+V+ ++ + D+ S+N+++K F + + K G++PD+ T + ++
Sbjct: 97 LVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLL 156
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF 265
+V +A+ + ++ + + + + ++ LC+ + A +L + M L
Sbjct: 157 HGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQ 216
Query: 266 NV-MTYNIVISGWSKLGQVVEMERVLKEIV-AEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+TY ++ G K G V +L+++ P+ + +S +I+ L + GR DA
Sbjct: 217 PTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQN 276
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+F M+EKG PD YN++I + S G + + + + M P++ TY LI+ +
Sbjct: 277 LFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFV 336
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
K K +A E+++EML RGI+P+T T +S ++ C AA M+ GC +L
Sbjct: 337 KEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLI 396
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
+ L+ G + ++L HEM E+G +D Y +I G +G L A+ +++E
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
+ G CP + L + L + KL+ A +F+ ++ ++++
Sbjct: 457 ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 190/431 (44%), Gaps = 47/431 (10%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
++ +V Y+ I+ +L + N+ ++M ++G+ PDL T + ++ F +G+ A
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDA 309
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
Q+L + + + D + N ++ + A L++ M + ++ N +TY+ +I G
Sbjct: 310 EQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG 369
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K ++ E + + +G SP+ +TF+ LI+G A RIDD +E+ M E G D
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGM-SSYNC--------------------------- 368
T YN +I + VGD + + + M SS C
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489
Query: 369 ------------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
EP++ TY LISGL+ K +A E++EEM RGIVP T T
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+S ++ LC A M+ ++ + L+ G+ L+L+ EM
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G ++ Y +I G +G + A+ + +E + G P + + L + +L+
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669
Query: 531 AYNLFRKIKIA 541
A + K++++
Sbjct: 670 AVAMLEKLQMS 680
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/170 (19%), Positives = 79/170 (46%)
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P++ + +L+ +++ + + ++++M + I + ++ CS A+
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ K K+G + + LL L + L+L+H+M E+ + + ++ GLC
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G++ AV +++ + G P+++ Y + + + SA NL RK++
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKME 246
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 191/401 (47%), Gaps = 3/401 (0%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
N + EAM L K D+ +Y V+V L +R D N+L+ M + + P +
Sbjct: 814 NKASEAMALIDRMVAK--GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 871
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
+ ++D + + A+ + +E G++ + + + ++ CLC AS L + M
Sbjct: 872 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 931
Query: 260 -KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+ K+ +V T++ +I + K G++VE E++ E+V P +T+S LI G R+
Sbjct: 932 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 991
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
D+A ++F+ M K C PD YN +I + +E M+ ++ MS N TY L
Sbjct: 992 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 1051
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I GL ++ A E+F+EM+ G+ P+ T + L+ LC G AM++++ ++
Sbjct: 1052 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 1111
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ ++ Y +++ + GK DL+ + G D Y +I+G C G E A
Sbjct: 1112 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 1171
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ +E G P+ Y+ L L E++ L ++++
Sbjct: 1172 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 1212
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 185/407 (45%), Gaps = 36/407 (8%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM---- 220
+Y++++ RR VL M K G P++ TLS +++ + + ++ +A+ +
Sbjct: 732 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 791
Query: 221 -------------------------------LGRLEDFGLKFDAESLNVVLWCLCQRLHV 249
+ R+ G + D + VV+ LC+R
Sbjct: 792 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 851
Query: 250 GAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
A +L N M +GK+ V+ YN +I G K + + + KE+ +G P+ +T+S L
Sbjct: 852 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 911
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I L GR DA + M E+ PD ++A+I ++ G E K Y M +
Sbjct: 912 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 971
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
+P++ TY+ LI+G ++ +A ++FE M+ + P T + ++ C Y M
Sbjct: 972 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 1031
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++++ + G + Y +L++ L G C M +++ EM G P + Y ++ GLC
Sbjct: 1032 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 1091
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
G+LE A++V E R P+ Y+ + + + K+E ++LF
Sbjct: 1092 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 1138
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 182/382 (47%), Gaps = 1/382 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D+ ++N+++ ++L M K G PD T+ +++ F R +V A+
Sbjct: 219 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 278
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ ++ + G K D + N ++ LC+ V A F ++ K + NV+TY +++G
Sbjct: 279 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 338
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ + R+L +++ + +P+ +T+S L++ + G++ +A E+F+ M PD
Sbjct: 339 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 398
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y+++I+ DE + + M S C ++ +Y LI+G K+++V D +++F E
Sbjct: 399 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 458
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M RG+V +T T + ++ G A + + G + Y +LL L G+
Sbjct: 459 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 518
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L ++ +MQ+ D Y VI G+C G++E A + KG P + Y+
Sbjct: 519 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 578
Query: 518 LSNKLLASNKLESAYNLFRKIK 539
+ + L L L+ K+K
Sbjct: 579 MMSGLCTKGLLHEVEALYTKMK 600
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 190/393 (48%), Gaps = 3/393 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF + P + +N ++ A+ + K +D + ++ M G+ DL T +I
Sbjct: 171 DAIDLFSDMVKSRP--FPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 228
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
V++ F QV A+ +LG++ G + D ++ ++ C+R V A SL + M +
Sbjct: 229 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 288
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+++ YN +I K +V + KEI +G P+ +T++ L+ GL + R DA
Sbjct: 289 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 348
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+ M +K P+ Y+A++ ++ G E + ++ M + +P++ TY+ LI+GL
Sbjct: 349 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 408
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
++ +A ++F+ M+ +G + + + + C M ++++ + G +
Sbjct: 409 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 468
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L++ G + + +M G D Y ++ GLC+ G+LE A+++ E+
Sbjct: 469 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 528
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
++ + Y+ + + + K+E A++LF
Sbjct: 529 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 561
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 195/409 (47%), Gaps = 20/409 (4%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F I+ + +V +Y +V L + +LSDM K+ + P++ T S ++D+F+
Sbjct: 315 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 374
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVM 268
+ G+V +A ++ + + D + + ++ LC + A+ +F+ M K L +V+
Sbjct: 375 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV 434
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
+YN +I+G+ K +V + ++ +E+ G +++T++ LI+G +AG +D A E F M
Sbjct: 435 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 494
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
G PD YN ++ G+ ++ + ++ M + ++ TYT +I G+ K+ KV
Sbjct: 495 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 554
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG-----CKLSLT 443
+A +F + +G+ P T T+ + LC+ G H +Y K ++ G C LS
Sbjct: 555 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDG 614
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQE-------------SGYPSDGEIYEYVIAGLCNI 490
L + CG L +++ SG S + GL +
Sbjct: 615 DITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSEL 674
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+L++AV + E ++ PS + +SKL + + NK + +L +++
Sbjct: 675 -KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQ 722
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 190/408 (46%), Gaps = 25/408 (6%)
Query: 114 GVIEDALWNV-NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAI------KHP----NVAKD 162
GV+ + L + DL+ +++ K+ +G L E VL +N I KH N+ K+
Sbjct: 839 GVVVNGLCKRGDTDLAFNLLNKM-EQGKL--EPGVLIYNTIIDGLCKYKHMDDALNLFKE 895
Query: 163 VKSYNVIVKALGRRKFFDFMCN---------VLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+++ + + +CN +LSDM + +NPD+ T S ++D+F++ G+
Sbjct: 896 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 955
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
+ +A ++ + + + + ++ C + A +F M K F +V+TYN
Sbjct: 956 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 1015
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G+ K +V E V +E+ G +++T++ LI+GL +AG D A E+F M G
Sbjct: 1016 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 1075
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ YN ++ G ++ M ++ + EP + TY +I G+ K+ KV D
Sbjct: 1076 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 1135
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
++F + +G+ P + + C G A ++K+ ++ G + Y L+R
Sbjct: 1136 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 1195
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
G +L EM+ G+ D ++ + + G+L+ + L M
Sbjct: 1196 LRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSFLDM 1242
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 168/360 (46%), Gaps = 7/360 (1%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
++ SDM K P + + ++ + ++ + I + ++E G++ D + N+V+ C
Sbjct: 174 DLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 233
Query: 244 CQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C V A S+ M K + +T +++G+ + +V + ++ ++V G+ PD
Sbjct: 234 CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI 293
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+ ++ +I+ L + R++DA + F ++ KG P+ Y A+++ + + + +
Sbjct: 294 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 353
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M PN+ TY+ L+ +K+ KV +A E+FEEM+ I P T +S + LC +
Sbjct: 354 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 413
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEI 479
A M+ GC + +Y L ++GF K + D L+ EM + G S+
Sbjct: 414 IDEANQMFDLMVSKGCLADVVSYNTL---INGFCKAKRVEDGMKLFREMSQRGLVSNTVT 470
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y +I G G ++ A + G P Y+ L L + +LE A +F ++
Sbjct: 471 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 530
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/431 (19%), Positives = 190/431 (44%), Gaps = 27/431 (6%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
F ++ G+ D +W N+ ++G + + G L +A+V+F + + ++ D+ +
Sbjct: 490 FFSQMDFFGISPD-IWTYNI-----LLGGLCDNGELE-KALVIFEDMQKREMDL--DIVT 540
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y +++ + + + ++ ++ +G+ PD+ T + +M G +++ + +++
Sbjct: 541 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 600
Query: 226 DFGLKFDAESL---NVVLWC--LCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKL 280
GL + +L ++ L + + L G A SL +K V ++ SG +
Sbjct: 601 QEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSY 660
Query: 281 GQVVEMER-------------VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
++ R + E+V P + FS L+ + + + D I + +
Sbjct: 661 DYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQ 720
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M+ G + Y+ +I+ + + M EPN+ T + L++G S++
Sbjct: 721 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 780
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+++A+ + ++M G P+T T + + L + AM + + GC+ L Y +
Sbjct: 781 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 840
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
++ L G + +L ++M++ IY +I GLC +++A+ + +E KG
Sbjct: 841 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 900
Query: 508 FCPSRLVYSKL 518
P+ + YS L
Sbjct: 901 IRPNVVTYSSL 911
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 122/270 (45%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N TY+I+I+ + + Q+ VL +++ G+ P+ +T S L+ G + RI +A+ +
Sbjct: 729 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 788
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M G P+T +N +I E M M + C+P++ TY +++GL K
Sbjct: 789 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 848
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
A + +M + P + ++ LC Y A+ ++K+ G + ++ Y
Sbjct: 849 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 908
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ L +G+ L +M E D + +I G+L A + +E ++
Sbjct: 909 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 968
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ PS + YS L N ++L+ A +F
Sbjct: 969 RSIDPSIVTYSSLINGFCMHDRLDEAKQMF 998
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 102/225 (45%)
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
R +++DAI++F M + P +N ++S + + +D + K M ++
Sbjct: 165 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 224
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
T+ +I+ +V+ AL + +ML G P TI S + C A+ + K
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
++G K + AY ++ L + D + E++ G + Y ++ GLCN +
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+A ++ + ++K P+ + YS L + + + K+ A LF ++
Sbjct: 345 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 389
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 76/167 (45%)
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
D RL L+ K+ DA+++F +M+ PS L + + + KK
Sbjct: 154 DLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKK 213
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+G + L + +++ + + L + +M + GY D ++ G C +
Sbjct: 214 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 273
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ +AV ++++ + G+ P + Y+ + + L + ++ A++ F++I+
Sbjct: 274 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE 320
>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
Length = 554
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 186/414 (44%), Gaps = 4/414 (0%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
+V K++ R + A FF W SY+++V LG+ K FD M +++ M
Sbjct: 134 LVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMV 193
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+ G L T++ VM A + +AI +++ FG+ D +++NV+L LC+ V
Sbjct: 194 EVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVK 253
Query: 251 AASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A +F ++G + + ++N ++ GW K + E ++E+ GFSP +T++ L+E
Sbjct: 254 RARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVE 313
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
+ D M+++ C P+ Y ++ G E + + + P
Sbjct: 314 AYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAP 373
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
+ Y LI L ++ ++ DA V EEM GI P+ T + + C + A+ +
Sbjct: 374 DASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLL 433
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
K + C + Y LL+ +LL L M D Y +++ LC
Sbjct: 434 VKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRN 493
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
G++ + L +EE + KGF P + + + KL N L+S Y +KI++ R
Sbjct: 494 GKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRN-LQSVY---KKIQVLRTQ 543
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 203/425 (47%), Gaps = 3/425 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
IE AL + ++S D V K+ + A LF + V + N ++ R
Sbjct: 72 IEAALDRLRREISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFAR 131
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE-DFGLKFDAE 234
K N+L + PD+ET ++++ + A + +A ++ +E DFG+ +
Sbjct: 132 TKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLK 191
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
+ N+VL LC+ V AA F +++ + + T++I+I+G K G +++ + +E
Sbjct: 192 THNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETT 251
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
G + D T++ ++ L + +I +A+ + + + GC P YNA+++ +G +
Sbjct: 252 TNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLE 311
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E + + + C P++ TYT LI GL K ++ +A ++F+EM RG+ T T+ +
Sbjct: 312 EAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALI 371
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
L G A +YK GC + ++ LS G+ G + ++ M+ G
Sbjct: 372 RGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLA 431
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRLVYSKLSNKLLASNKLESAYN 533
+ +Y +I GLC +++ A L M ++K FC P + Y+ L + L S +E+A
Sbjct: 432 PNEVVYSALIHGLCKARKMDCA-LEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARA 490
Query: 534 LFRKI 538
F ++
Sbjct: 491 FFDEM 495
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 184/387 (47%), Gaps = 17/387 (4%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDM-----AKEGVNPDLETLSIVMDSFIRAGQ 213
VA +K++N+++ L + VL+ M + + T SI+++ ++AG
Sbjct: 186 VAPSLKTHNLVLHGLCKSG------KVLAAMDHFEAVRRSMPVSAATFSILINGLVKAGM 239
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
+ +A + G D + ++ L + + A +L + + TYN
Sbjct: 240 MIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNA 299
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+++G K+G++ E +L++IV G +PD +T++ LI+GLG+ R +A ++F M +G
Sbjct: 300 LLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRG 359
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
DT Y A+I + G + YK M+S+ C P++ T + +I GL K+ ++ A+
Sbjct: 360 LALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAV 419
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+F+ M RG+ P+ ++ + LC A+ M + +K C Y +L+ L
Sbjct: 420 RIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 479
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G + EM E+G D Y +I+GLC G + A V+++ SR
Sbjct: 480 CKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDD-----MSSSR 534
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKIK 539
VYS L + L S KLE LF +++
Sbjct: 535 FVYSSLVDGLCKSGKLEGGCMLFHEME 561
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 132/323 (40%), Gaps = 40/323 (12%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L+K+ G D + ++ +D +GK S EA LF A + +A D
Sbjct: 316 LLRKIVDNGCTPDVVTYTSL---IDGLGK----EKRSFEAYKLFKEMASR--GLALDTVC 366
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y +++ L + +V M G PD+ TLS ++D +AG++ A+++ +E
Sbjct: 367 YTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSME 426
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVV 284
GL + + ++ LC+ + A + MK + +TYNI+I G K G V
Sbjct: 427 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVE 486
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK--------------- 329
E++ G PD T++ LI GL +AG D A V D M
Sbjct: 487 AARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFVYSSLVDGLCK 546
Query: 330 ----EKGCG----------PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
E GC ++ +I + DE + + + P+ Y
Sbjct: 547 SGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAY 605
Query: 376 TRLISGLLKSRKVADALEVFEEM 398
+IS L+KS KV + V++EM
Sbjct: 606 NSIISALIKSGKVNEGQAVYQEM 628
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 96/192 (50%), Gaps = 8/192 (4%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA FF+ ++ DV +YN+++ L + D C VL DM+ S
Sbjct: 486 EAARAFFDEMLE-AGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRF-----VYSS 539
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++D ++G++ + +E G+ ++++ +++ LC+ V A SLFN+++ +
Sbjct: 540 LVDGLCKSGKLEGGCMLFHEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG 598
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+ + YN +IS K G+V E + V +E+ + PD +T++ L+ G+ A R+D A
Sbjct: 599 MPHPYAYNSIISALIKSGKVNEGQAVYQEMT-RWWKPDRVTYNALLNGMIGANRMDRAHY 657
Query: 324 VFDTMKEKGCGP 335
+ M +G P
Sbjct: 658 YYLEMTGRGYVP 669
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 103/252 (40%), Gaps = 38/252 (15%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y+ ++ L + + D +L+ M K PD T +I++D ++G V A +
Sbjct: 437 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEML 496
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE 285
+ G K D + N+++ LC+ + AA + + M + Y+ ++ G K G++
Sbjct: 497 EAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSS----SRFVYSSLVDGLCKSGKLEG 552
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG----------- 334
+ E+ G + +S T + LI L +A R+D+A+ +F+ ++++G
Sbjct: 553 GCMLFHEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISA 611
Query: 335 ----------------------PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
PD YNA+++ I D YY M+ P +
Sbjct: 612 LIKSGKVNEGQAVYQEMTRWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPV 671
Query: 373 DTYTRLISGLLK 384
+L LK
Sbjct: 672 SILHKLADDRLK 683
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 184/410 (44%), Gaps = 39/410 (9%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y ++ AL +R D +L +M G PD+ T + V+ F R +V + +++ R+
Sbjct: 248 YQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMI 307
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE 285
G + + ++ LC+ + A +L + + G NV+ +N +++G+ + G++ E
Sbjct: 308 LKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGP---NVVHFNTLVNGFVRNGRLNE 364
Query: 286 MER-VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN------ 338
V +++ G+ PD TFS L+ GL + G A+E+ + M KGC P+ N
Sbjct: 365 ATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILI 424
Query: 339 -----------------------------AYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
YNA+IS G E + + MSS C+
Sbjct: 425 DGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCK 484
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P++ T+ LI GL + ++ DAL ++ +M+ G++ ++ T + + G A+ +
Sbjct: 485 PDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKL 544
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
GC L Y L++ L G L L+ EM G +I G C
Sbjct: 545 VNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCT 604
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G++ NA+ M + + +GF P + Y+ L N L +++ A NLF K++
Sbjct: 605 AGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQ 654
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 174/347 (50%), Gaps = 3/347 (0%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQML-GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
P++ + +++ F+R G++ +A + ++ + G D + + ++ LC++ G+A
Sbjct: 344 PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALE 403
Query: 255 LFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
L N M K N+ TY I+I G+ K GQ+ E +L+E++ +GFS +++ ++ LI L
Sbjct: 404 LVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALC 463
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+ G+I +A+++F M KGC PD +N++I V + ++ + Y+ M N
Sbjct: 464 KHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSV 523
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
T+ LI L+ ++ +AL++ +ML RG T ++ LC G + ++++
Sbjct: 524 TFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEM 583
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
+ G S+ +L+ GK L+ +M G+ D Y +I GLC G++
Sbjct: 584 IRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRI 643
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA-YNLFRKIK 539
+ A+ + E+ +G P + Y+ L L + A + L+R ++
Sbjct: 644 QEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVE 690
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 166/367 (45%), Gaps = 6/367 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRR-KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+ PNV +N +V R + + V M G PD+ T S +++ + G
Sbjct: 341 VPGPNVVH----FNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKG 396
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYN 271
A++++ ++ G K + + +++ C++ + A + M K N + YN
Sbjct: 397 LFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYN 456
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+IS K G++ E + E+ ++G PD TF+ LI GL R ++DA+ ++ M +
Sbjct: 457 ALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLE 516
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G ++ +N +I ++ G+ E +K M C + TY LI L K+ V
Sbjct: 517 GVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKG 576
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
L +FEEM+ +G+ PS T + C+ G H A+ + G + Y L+
Sbjct: 577 LGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLING 636
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L G+ L+L+ ++Q G D Y +I LC G ++A ++ + GF P+
Sbjct: 637 LCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPN 696
Query: 512 RLVYSKL 518
+ ++ L
Sbjct: 697 DVTWNIL 703
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 174/397 (43%), Gaps = 5/397 (1%)
Query: 141 LSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
L E + F WA Y +++ LG F + +L M +EG+
Sbjct: 82 LDVETSMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESL 141
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLED-FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
++M + RAG +A ++L ++ + + S NVVL L AS++F M
Sbjct: 142 FILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDM 201
Query: 260 KGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
K V N T+ +V+ + +V +L+++ G P+S+ + LI+ L + R+
Sbjct: 202 LSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRV 261
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
D+A+++ + M GC PD N +N VI + + E K M PN TY L
Sbjct: 262 DEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYL 321
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
+ GL K+ ++ +A + ++ +V + F+ + A +Y K G
Sbjct: 322 MHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVR---NGRLNEATAFVYDKMINNGY 378
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ + L+ L G G L+L ++M G + Y +I G C GQLE A L
Sbjct: 379 VPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGL 438
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
++ E L KGF + + Y+ L + L K+ A ++F
Sbjct: 439 ILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMF 475
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 1/244 (0%)
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+G+ + LI+ LG A + MKE+G + + ++ Y G +
Sbjct: 98 KGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQ 157
Query: 356 CMKYYKGMSS-YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ M Y CEP+ +Y ++ L+ + A VF +ML +G+ P+ T +
Sbjct: 158 ATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVM 217
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
+ LC A ++ + K GC + Y+ L+ LS + L L EM G P
Sbjct: 218 KALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCP 277
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
D + VI G C + ++ +++ + KGF P+ + Y L + L + +++ A L
Sbjct: 278 PDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQAL 337
Query: 535 FRKI 538
K+
Sbjct: 338 LSKV 341
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 132/304 (43%), Gaps = 58/304 (19%)
Query: 47 MSSLDEHHVLKELSDLF-QISSHNSFPNVYK-ESRSNSVKRIDSSRAVDEFLLPEER-LR 103
+S+L +H + E D+F ++SS P+++ S + R+D D L + L
Sbjct: 459 ISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEME--DALALYRDMVLE 516
Query: 104 GVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDV 163
GV + +I L + +L +V ++ RG D
Sbjct: 517 GVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRG-------------------CPLDE 557
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+YN ++KAL + + + +M ++G+ P + T +I+++ F AG+V+ A++ +
Sbjct: 558 ITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRD 617
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQV 283
+ +H G + +++TYN +I+G K G++
Sbjct: 618 M----------------------IHRGFSP------------DIVTYNSLINGLCKRGRI 643
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E + +++ AEG PDS+T++ LI L R G DDA + E G P+ +N +
Sbjct: 644 QEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNIL 703
Query: 344 ISNY 347
+ N+
Sbjct: 704 VYNF 707
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 181/381 (47%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ DV +Y+ I+ AL + + D VL+ M K GV P+ T + ++ + + Q +AI
Sbjct: 227 ISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAI 286
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
L ++ G++ D + N ++ LC+ A +F+SM + L ++ TY ++ G+
Sbjct: 287 GFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGY 346
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G +VEM +L +V G PD F+ LI + ++D+A+ VF M++ G P+
Sbjct: 347 ATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNV 406
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y AVI G D+ M Y++ M PN+ YT LI L K A E+ E
Sbjct: 407 VTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILE 466
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
MLDRGI +T S + C G + ++ ++G K ++ Y L+ GK
Sbjct: 467 MLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGK 526
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L M G D Y +I G C + ++++A+ + +E + G P+ + Y+
Sbjct: 527 MDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 586
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ L + + +A L+ I
Sbjct: 587 ILQGLFHTRRTAAAKELYVGI 607
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 151/337 (44%), Gaps = 5/337 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HP D +N+++ A +++ D V S M + G+NP++ T V+ ++G V
Sbjct: 368 HP----DHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVD 423
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
A+ ++ D GL + ++ LC A L M + + N + +N +I
Sbjct: 424 DAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSII 483
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
K G+V+E E++ +V G P+ +T+S LI+G AG++D+A ++ +M G
Sbjct: 484 HSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMK 543
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN +I+ Y V D+ + +K M S PN+ TY ++ GL +R+ A A E+
Sbjct: 544 PDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 603
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ + G T L LC A+ M++ +L + +++ L
Sbjct: 604 YVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 663
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
G+ DL+ + +G D Y + L G
Sbjct: 664 VGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 700
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 187/420 (44%), Gaps = 12/420 (2%)
Query: 106 FLQKLKGKGVIEDAL-WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
FL+K++ GV D + +N +D + + S EA +F + + + D+
Sbjct: 288 FLKKMRSDGVEPDVVTYNSLMDY--------LCKNGRSTEARKIFDSMTKR--GLEPDIA 337
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y +++ + M +L M + G++PD +I++ ++ + +V +A+ + ++
Sbjct: 338 TYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM 397
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
GL + + V+ LC+ V A F M + L N++ Y +I +
Sbjct: 398 RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKW 457
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ E ++ E++ G +++ F+ +I + GR+ ++ ++FD M G P+ Y+ +
Sbjct: 458 DKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTL 517
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I Y G DE K M S +P+ TY LI+G + ++ DAL +F+EM+ G+
Sbjct: 518 IDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGV 577
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T L+ L AA +Y K G +L L+ Y ++L L L
Sbjct: 578 SPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALR 637
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
++ + + + + +I L +G+ + A + G P YS ++ L+
Sbjct: 638 MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLI 697
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 138/308 (44%), Gaps = 7/308 (2%)
Query: 238 VVLWCLCQ--RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE-MERVLKEIV 294
+++ C C+ RL +G A+ L N +K +T+ ++ G + + M+ VL+ +
Sbjct: 92 ILIGCCCRAGRLDLGFAA-LGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK---GCGPDTNAYNAVISNYISVG 351
PD + + L++GL R +A+E+ M + G PD +Y VI+ + G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEG 210
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
D D+ Y M P++ TY+ +I+ L K + + A+EV M+ G++P+ T
Sbjct: 211 DSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYN 270
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
S L CS P A+ KK R G + + Y L+ L G+ ++ M +
Sbjct: 271 SILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKR 330
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G D Y ++ G G L +++ +R G P V++ L K++ A
Sbjct: 331 GLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEA 390
Query: 532 YNLFRKIK 539
+F K++
Sbjct: 391 MLVFSKMR 398
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 161/393 (40%), Gaps = 49/393 (12%)
Query: 189 MAKEG---VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
MA+ G V P + T I++ RAG++ LG + G + +A + +L LC
Sbjct: 75 MARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCA 134
Query: 246 RLHVGAASSLF--NSMKGKVLFNVMTYNIVISGW---SKLGQVVEMERVLKEIVAEGFSP 300
A + + + +V + I++ G ++ + +E+ ++ + G +P
Sbjct: 135 DKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAP 194
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
D ++++ +I G + G D A + M ++ PD Y+++I+ D+ M+
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVL 254
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
M PN TY ++ G S + +A+ ++M G+ P T S ++ LC
Sbjct: 255 TTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKN 314
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL---------------- 464
G A ++ K G + + Y LL+ G+ G L+++
Sbjct: 315 GRSTEARKIFDSMTKRGLEPDIATYCTLLQ---GYATKGALVEMHALLDLMVRNGIHPDH 371
Query: 465 ----------------------WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
+ +M++ G + Y VI LC G +++A+L E+
Sbjct: 372 HVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQ 431
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ +G P+ +VY+ L + L +K + A L
Sbjct: 432 MIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELI 464
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 91/199 (45%), Gaps = 1/199 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN ++ R D + +M GV+P++ T +I++ + A ++
Sbjct: 545 DCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELY 604
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
+ G + + + N++L LC+ A +F ++ + T+NI+I K+
Sbjct: 605 VGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKV 664
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ E + + + A G PD T+S + E L G +++ ++F +M+E GC ++
Sbjct: 665 GRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRML 724
Query: 341 NAVISNYISVGDFDECMKY 359
N+++ + GD Y
Sbjct: 725 NSIVRKLLQRGDITRAGTY 743
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
+ NL+ EA+ +F N + ++ + +++N+++ AL + D ++ + ++ G+ PD
Sbjct: 628 KNNLTDEALRMFQNLCLT--DLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 685
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ T S++ ++ I G + + + +E+ G ++ LN ++ L QR + A + +
Sbjct: 686 VRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLS 745
Query: 258 SMKGK 262
+ K
Sbjct: 746 MIDEK 750
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 153/304 (50%), Gaps = 11/304 (3%)
Query: 243 LCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
LC++ + A +F M+ K + TYNI+I+G K Q+ ++ E+ A GFSP
Sbjct: 101 LCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPT 160
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+T++ LI G AGR+D A+++ D M+ +G P+T Y A+I G+ + + K
Sbjct: 161 VVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLK 220
Query: 362 GMS--SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
M C PN+ TYT+LI GL + +E +EM+ G P+ T T+ + LC
Sbjct: 221 EMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQ 280
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ----ESGYPS 475
G A ++ + +GC+L + Y L+ L G+ LD EMQ E G
Sbjct: 281 KGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGE----LDFAREMQILMVEKGVAP 336
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
D Y +I GLC+ G L+ A+ +M+E KG P+ + Y+ L N +++ + A L
Sbjct: 337 DVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLV 396
Query: 536 RKIK 539
++K
Sbjct: 397 NEMK 400
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 149/329 (45%), Gaps = 3/329 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV SY+ + L ++ + +M ++G PD T +I+++ + Q+ + ++
Sbjct: 90 DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++ G + ++ C V AA + + M+ + + N +TY +I G
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209
Query: 281 GQVVEMERVLKEIVAEG--FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
G+V VLKE+ G P+ +T++ LI GL + G + +E D M GC P+
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
Y A+I G F E M + CE ++ Y LI GL K ++ A E+ M
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILM 329
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+++G+ P T TS ++ LC G A+ + ++ R G + Y L+ + +
Sbjct: 330 VEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRT 389
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
L L +EM+ +G G+IY+ + L
Sbjct: 390 DHALQLVNEMKSNGLMPAGDIYKILFKSL 418
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 2/233 (0%)
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
D +++S I GL + G+I +A+E+F M+EKG PD+ YN +I+ + +
Sbjct: 90 DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
M + P + TYT LI G + +V A+++ +EM RGI P+T T T+ ++ LC
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209
Query: 421 GPPHAAMMMYKKARKVG--CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
G A+++ K+ + G C ++ Y L+ L G M ++ EM SG +
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
Y +I GLC G A +++ E + G ++Y+ L + L +L+ A
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFA 322
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 2/170 (1%)
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
+Y+R I+GL K ++A+A+E+F EM ++G P + T + LC + + +
Sbjct: 93 SYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEM 152
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
+ G ++ Y L+ G+ +D+ EM+ G + Y +I GLC+ G++
Sbjct: 153 QARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEV 212
Query: 494 ENAVLVMEESLRKG--FCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
E A+LV++E +G CP+ + Y++L + L E ++ I+
Sbjct: 213 ERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIIS 262
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 92/197 (46%), Gaps = 1/197 (0%)
Query: 145 AMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIV 204
A+++ ++ +V +Y ++ L ++ F+ L +M G P+ T + +
Sbjct: 215 AILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTAL 274
Query: 205 MDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-V 263
+ + G +A +L + G + D N ++ LC+ + A + M K V
Sbjct: 275 IHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGV 334
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+V TY +I G G + E +++E+ A+G P+S+T++ LI G +A R D A++
Sbjct: 335 APDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQ 394
Query: 324 VFDTMKEKGCGPDTNAY 340
+ + MK G P + Y
Sbjct: 395 LVNEMKSNGLMPAGDIY 411
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 191/401 (47%), Gaps = 3/401 (0%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
N + EAM L K D+ +Y V+V L +R D N+L+ M + + P +
Sbjct: 200 NKASEAMALIDRMVAK--GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 257
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
+ ++D + + A+ + +E G++ + + + ++ CLC AS L + M
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 260 -KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+ K+ +V T++ +I + K G++VE E++ E+V P +T+S LI G R+
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
D+A ++F+ M K C PD YN +I + +E M+ ++ MS N TY L
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I GL ++ A E+F+EM+ G+ P+ T + L+ LC G AM++++ ++
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ ++ Y +++ + GK DL+ + G D Y +I+G C G E A
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ +E G P+ Y+ L L E++ L ++++
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 185/407 (45%), Gaps = 36/407 (8%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM---- 220
+Y++++ RR VL M K G P++ TLS +++ + + ++ +A+ +
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 221 -------------------------------LGRLEDFGLKFDAESLNVVLWCLCQRLHV 249
+ R+ G + D + VV+ LC+R
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 250 GAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
A +L N M +GK+ V+ YN +I G K + + + KE+ +G P+ +T+S L
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I L GR DA + M E+ PD ++A+I ++ G E K Y M +
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
+P++ TY+ LI+G ++ +A ++FE M+ + P T + ++ C Y M
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++++ + G + Y +L++ L G C M +++ EM G P + Y ++ GLC
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
G+LE A++V E R P+ Y+ + + + K+E ++LF
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 190/408 (46%), Gaps = 25/408 (6%)
Query: 114 GVIEDALWNV-NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAI------KHP----NVAKD 162
GV+ + L + DL+ +++ K+ +G L E VL +N I KH N+ K+
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKM-EQGKL--EPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 163 VKSYNVIVKALGRRKFFDFMCN---------VLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+++ + + +CN +LSDM + +NPD+ T S ++D+F++ G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
+ +A ++ + + + + ++ C + A +F M K F +V+TYN
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G+ K +V E V +E+ G +++T++ LI+GL +AG D A E+F M G
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ YN ++ G ++ M ++ + EP + TY +I G+ K+ KV D
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
++F + +G+ P + + C G A ++K+ ++ G + Y L+R
Sbjct: 522 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 581
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
G +L EM+ G+ D ++ + + G+L+ + L M
Sbjct: 582 LRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSFLDM 628
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 122/270 (45%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N TY+I+I+ + + Q+ VL +++ G+ P+ +T S L+ G + RI +A+ +
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M G P+T +N +I E M M + C+P++ TY +++GL K
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
A + +M + P + ++ LC Y A+ ++K+ G + ++ Y
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ L +G+ L +M E D + +I G+L A + +E ++
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ PS + YS L N ++L+ A +F
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 104/227 (45%)
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
E+V P + FS L+ + + + D I + + M+ G + Y+ +I+ +
Sbjct: 71 EMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRS 130
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
+ M EPN+ T + L++G S+++++A+ + ++M G P+T T
Sbjct: 131 QLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFN 190
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
+ + L + AM + + GC+ L Y +++ L G + +L ++M++
Sbjct: 191 TLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG 250
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
IY +I GLC +++A+ + +E KG P+ + YS L
Sbjct: 251 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 128/293 (43%), Gaps = 1/293 (0%)
Query: 247 LHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
L + A +LF M K + +++ ++ ++S +K+ + + + +++ G + T+
Sbjct: 60 LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 119
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
S LI R ++ A+ V M + G P+ +++++ Y E + M
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
+PN T+ LI GL K ++A+ + + M+ +G P T + LC G
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A + K + + + Y ++ L + L+L+ EM+ G + Y +I+
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
LCN G+ +A ++ + + + P +S L + + KL A L+ ++
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 76/181 (41%), Gaps = 6/181 (3%)
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+ + G +SY D +L L K+ DA+ +F EM+ PS + L +
Sbjct: 38 RAFSGKTSY------DYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAI 91
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
+ + ++ + +G + Y +L+ + + L + +M + GY +
Sbjct: 92 AKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNI 151
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
++ G C+ ++ AV ++++ G+ P+ + ++ L + L NK A L +
Sbjct: 152 VTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDR 211
Query: 538 I 538
+
Sbjct: 212 M 212
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 186/414 (44%), Gaps = 4/414 (0%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
+V K++ R + A FF W SY+++V LG+ K FD M +++ M
Sbjct: 193 LVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMV 252
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+ G L T++ VM A + +AI +++ FG+ D +++NV+L LC+ V
Sbjct: 253 EVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVK 312
Query: 251 AASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A +F ++G + + ++N ++ GW K + E ++E+ GFSP +T++ L+E
Sbjct: 313 RARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVE 372
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
+ D M+++ C P+ Y ++ G E + + + P
Sbjct: 373 AYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAP 432
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
+ Y LI L ++ ++ DA V EEM GI P+ T + + C + A+ +
Sbjct: 433 DASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLL 492
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
K + C + Y LL+ +LL L M D Y +++ LC
Sbjct: 493 VKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRN 552
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
G++ + L +EE + KGF P + + + KL N L+S Y +KI++ R
Sbjct: 553 GKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRN-LQSVY---KKIQVLRTQ 602
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 192/417 (46%), Gaps = 32/417 (7%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K +V++Y ++ L R F+ V M +G+ P T S +++ G+
Sbjct: 333 MKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGR 392
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
A+ + + + E+ NV++ C ++ A+++F+ M K NV+TYNI
Sbjct: 393 FETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNI 452
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I + K G + R+L+ + G D+ T++ LI G R G+++ A +F+ M E G
Sbjct: 453 IIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHG 512
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ YNA+I+ Y++V D+ + + M P+ TY +ISG K+ ++++A
Sbjct: 513 ISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAE 572
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV---------------- 436
+M+ +G++P+ T TSF++ LC G A ++ + +K
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGL 632
Query: 437 ---------------GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
GC+ ++ Y L+R L G G+C L M++ G EIY
Sbjct: 633 CQEGQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYR 692
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++ G C ++E+A+ + + + GF P Y L L +N + A +F+ +
Sbjct: 693 ALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTM 749
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 178/375 (47%), Gaps = 1/375 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S++ ++ LG+ +V +M G+ P+L T + ++ G+V +A ++G +
Sbjct: 169 SFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHI 228
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+G D + ++ C+ ++ A +F+ M K N +TY+ +I+G G++
Sbjct: 229 FHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRL 288
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E +L+E++ +G P ++ I L AGR +A+++ MK++GCGP+ Y A+
Sbjct: 289 EEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTAL 348
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS G F+ + Y M + P TY+ LI+ L + AL +FE ML
Sbjct: 349 ISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDS 408
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+P+T T ++ CS G A ++ + K G ++ Y +++ G +
Sbjct: 409 LPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMR 468
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L M+ +G D Y +I+G G+LE+A + E + G P+ + Y+ + N L
Sbjct: 469 LLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYL 528
Query: 524 ASNKLESAYNLFRKI 538
K++ A LF K+
Sbjct: 529 TVAKVDDALALFWKM 543
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 177/400 (44%), Gaps = 21/400 (5%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
E+++ FF+W + D+ + ++ L R + F NV M K N
Sbjct: 92 ESVLRFFHWVSRTHFFKHDMSCFVSMLNRLVRDRLFVPADNVRILMIKSCRN-------- 143
Query: 204 VMDSFIRAGQVYKAIQMLGRLE---DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM- 259
G+V + IQ+L + DFG + S + +L L + G ++ M
Sbjct: 144 -------EGEVKRVIQVLSEINTTYDFG--YTLYSFSTLLIQLGKFDMDGLGRDVYIEML 194
Query: 260 KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
+ N+ T+N +I G+V E E ++ I G PD+ T++ LI G + G +D
Sbjct: 195 NSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLD 254
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
A E+FD M + GC P++ Y+A+I+ S G +E M + M EP + YT I
Sbjct: 255 LAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPI 314
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
L + + +A+++ +M RG P+ T T+ + L G A+ +Y K G
Sbjct: 315 VSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLV 374
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+ Y L+ +L G+ L ++ M + E Y +I G C+IG ++ A +
Sbjct: 375 PTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAI 434
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ L+ G P+ + Y+ + + + +A L +K
Sbjct: 435 FDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMK 474
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 178/407 (43%), Gaps = 6/407 (1%)
Query: 135 VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
+ N+G + +++ I H D +Y ++ + D + M K+G
Sbjct: 212 LCNKGKVQEAELIM---GHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGC 268
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
+P+ T S +++ G++ +A+ ML + D G++ + + + LC A
Sbjct: 269 DPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVK 328
Query: 255 LFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
L MK + NV TY +ISG S+ G+ V +++A+G P ++T+S LI L
Sbjct: 329 LLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLY 388
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
GR + A+ +F+ M P+T YN +I + S+G + + M PN+
Sbjct: 389 VEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVI 448
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
TY +I K + +A+ + E M G+ T T + + G A ++ +
Sbjct: 449 TYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEM 508
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG-YPSDGEIYEYVIAGLCNIGQ 492
+ G ++ Y ++ K L L+ +M ESG PS G Y +I+G +
Sbjct: 509 VEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSG-TYNMMISGFSKTNR 567
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ A + +++G P+ + Y+ + L + + A+ +F ++K
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMK 614
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 120/544 (22%), Positives = 227/544 (41%), Gaps = 29/544 (5%)
Query: 13 PLSSLSSSFSLFSFSTSVRSNLSYNELLSNQKKN--MSSLDEHHVLKELSDLFQISSHNS 70
P L S S+ S + + + L+ K + ++ LD H+ + + F S
Sbjct: 46 PFPELVSKISIILSSPTWERSSELSHLIPKLKPHHVVNLLDTHNNTESVLRFFHWVSRTH 105
Query: 71 FPNVYKESRSNSVKRIDSSRAV-DEFLLPEERLRGVFLQKLKGKGVIEDALW-----NVN 124
F +K S V ++ R V D +P + +R + ++ + +G ++ + N
Sbjct: 106 F---FKHDMSCFVSMLN--RLVRDRLFVPADNVRILMIKSCRNEGEVKRVIQVLSEINTT 160
Query: 125 VDLS---------LDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
D L +GK G L + + N I+ PN+ ++N ++K L
Sbjct: 161 YDFGYTLYSFSTLLIQLGKFDMDG-LGRDVYIEMLNSGIR-PNLF----TFNAMIKILCN 214
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ ++ + G PD T + ++ + G + A +M R+ G ++ +
Sbjct: 215 KGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVT 274
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
+ ++ LC + A + M K + V Y I I G+ E ++L ++
Sbjct: 275 YSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMK 334
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
G P+ T++ LI GL R G+ + AI V+ M G P Y+A+I+ G F+
Sbjct: 335 KRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFE 394
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ ++ M S++ PN +TY +I G + A +F++ML G P+ T +
Sbjct: 395 TALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIII 454
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
G + AM + + + G KL Y L+ S GK L++EM E G
Sbjct: 455 HIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGIS 514
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
+ Y +I G + ++++A+ + + + G PS Y+ + + +N++ A N
Sbjct: 515 PNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENF 574
Query: 535 FRKI 538
K+
Sbjct: 575 CGKM 578
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 160/393 (40%), Gaps = 68/393 (17%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
E + F W + H ++ + ++YNVI+K + + M K G +P++ T +I
Sbjct: 394 ETALTIFEWMLSHDSLP-NTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNI 452
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM---- 259
++ + + G + A+++L ++ GLK D + ++ + + A SLFN M
Sbjct: 453 IIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHG 512
Query: 260 --KGKVLFNVM------------------------------TYNIVISGWSKLGQVVEME 287
V +N + TYN++ISG+SK ++ E E
Sbjct: 513 ISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAE 572
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK---------------- 331
++V +G P+ +T++ I+GL + GR A ++F MK++
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGL 632
Query: 332 ---------------GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
GC P+ + Y ++ G E + + M +P+ + Y
Sbjct: 633 CQEGQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYR 692
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
L+ G K+ +V AL++F+ M+ G P + + LC A M++ K
Sbjct: 693 ALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKK 752
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
+ +LL L G+ + L+L H M+
Sbjct: 753 HWNSDEVVWTVLLDGLLKEGETDLSLELLHVME 785
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 88/218 (40%), Gaps = 5/218 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V +Y + L + + +M K P+L T S ++D + GQ A
Sbjct: 586 NVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA---- 641
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
RL D G + + ++ ++ LC + A L SMK K L + Y ++ G K
Sbjct: 642 ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKN 701
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+V ++ +V GF P + LI L +A A +F TM +K D +
Sbjct: 702 LEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVW 761
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
++ + G+ D ++ M S NC N T L
Sbjct: 762 TVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVML 799
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 181/379 (47%), Gaps = 1/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN IV + R ++L M + V D+ T S ++DS R G + AI +
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+E G+K + N ++ LC+ + L M + ++ NV+T+N+++ + K
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ E + KE++ G SP+ +T++ L++G R+ +A + D M C PD +
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++I Y V D+ MK ++ +S N TY+ L+ G +S K+ A E+F+EM+
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G++P T L+ LC G A+ +++ +K L + Y ++ + GK
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+L+ + G + Y +I+GLC G L A +++ + G P+ Y+ L
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 521 KLLASNKLESAYNLFRKIK 539
L L ++ L ++K
Sbjct: 552 AHLRDGDLTASAKLIEEMK 570
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 158/327 (48%), Gaps = 1/327 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ V +YN +V+ L + ++ +L DM + P++ T ++++D F++ G++ +A
Sbjct: 259 IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEAN 318
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ + G+ + + N ++ C + + A+++ + M + K +++T+ +I G+
Sbjct: 319 ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ +V + +V + I G +++T+S L++G ++G+I A E+F M G PD
Sbjct: 379 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y ++ G ++ ++ ++ + + + YT +I G+ K KV DA +F
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 498
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ +G+ P+ T T + LC G A ++ +K + G + Y L+R G
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVI 484
L EM+ G+ +D + VI
Sbjct: 559 LTASAKLIEEMKSCGFSADASSIKMVI 585
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 164/385 (42%), Gaps = 36/385 (9%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ---------- 245
P L S + R Q + +LE G+ + +LN+++ C C+
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 246 -----RLHVGAASSLFNS------MKGKV---------------LFNVMTYNIVISGWSK 279
+L ++ FN+ ++GKV +V+TYN +++G +
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G +L+++ D T+S +I+ L R G ID AI +F M+ KG
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YN+++ G +++ K M S PN+ T+ L+ +K K+ +A E+++EM+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
RGI P+ T + ++ C A M + C + + L++ +
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ ++ + + G ++ Y ++ G C G+++ A + +E + G P + Y L
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 520 NKLLASNKLESAYNLFRKIKIARQN 544
+ L + KLE A +F ++ ++ +
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMD 470
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 142/296 (47%), Gaps = 3/296 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +V ++NV++ + + +M G++P++ T + +MD + ++ +A
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 219 QMLGRLEDFGLKFDAESLNVVL--WCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISG 276
ML + D + ++ +C+ +R+ G N K ++ N +TY+I++ G
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM-KVFRNISKRGLVANAVTYSILVQG 412
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ + G++ E + +E+V+ G PD +T+ L++GL G+++ A+E+F+ +++
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y +I G ++ + + +PN+ TYT +ISGL K +++A +
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+M + G P+ T + + G A+ + ++ + G ++ K+++ L
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 154/357 (43%), Gaps = 12/357 (3%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDF--GLKFDAESLNVVLWCLCQR 246
M K + +++ L ++ ++ G + +L + F + D S++ C +R
Sbjct: 2 MIKRSITTNMKALRLIQPHLLKTGSLRT--DLLCTISSFFSSCERDFSSISNGNVCFRER 59
Query: 247 LHVGA-------ASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
L G A +LF M + + L +++ ++ S ++ Q + K++ G
Sbjct: 60 LRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI 119
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
+ + T + +I R + A V + + G PDT +N +I G E +
Sbjct: 120 AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 179
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
M C+P++ TY +++G+ +S + AL++ +M +R + T ++ ++ LC
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
G AA+ ++K+ G K S+ Y L+R L GK L +M +
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ ++ G+L+ A + +E + +G P+ + Y+ L + N+L A N+
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 118/262 (45%), Gaps = 1/262 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ ++ +YN ++ + N+L M + +PD+ T + ++ + +V +
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ + GL +A + ++++ CQ + A LF M VL +VMTY I++ G
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
G++ + + +++ + ++ +IEG+ + G+++DA +F ++ KG P+
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +IS G E + M PN TY LI L+ + + ++ EE
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Query: 398 MLDRGIVPSTGTITSFLEPLCS 419
M G +I ++ L S
Sbjct: 569 MKSCGFSADASSIKMVIDMLLS 590
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 107/229 (46%), Gaps = 1/229 (0%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
+ D+ ++ ++K K D V +++K G+ + T SI++ F ++G++ A +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWS 278
+ + G+ D + ++L LC + A +F + K K+ ++ Y +I G
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G+V + + + +G P+ +T++ +I GL + G + +A + M+E G P+
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
YN +I ++ GD K + M S + + +I LL + K
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 593
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 89/211 (42%), Gaps = 7/211 (3%)
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
D+ + ++ M P++ ++R S + ++++ L+ +++ GI + T+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
+ C A + K K+G + T + L++ L GK + L M E+G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
D Y ++ G+C G A+ ++ + + YS + + L +++A +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 534 LFRKIK-------IARQNDYARRLWRSKGWH 557
LF++++ + N R L ++ W+
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280
>gi|122236160|sp|Q0WP85.1|PP150_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g13420, mitochondrial; Flags: Precursor
gi|110738270|dbj|BAF01064.1| hypothetical protein [Arabidopsis thaliana]
Length = 509
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 209/435 (48%), Gaps = 16/435 (3%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E +L + L+ +++ + + R + + + FF + P+ + S+N+I+ LGR
Sbjct: 58 MESSLQLNGISLTPNLIHQTLLRLRHNSKIALSFFQYLRSLPSPSTTPTSFNLIIDILGR 117
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDF--GLKFDA 233
+ FD + ++ +M + +P ET I++ I AG +A++ F +F
Sbjct: 118 VRQFDVVRQLIVEM--DQTSP--ETFLILVKRLIAAGLTRQAVRAFDDAPCFLENRRFRL 173
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
+L LC+ + A +FN K + + Y I+I+GW KL ++ E+ L E+
Sbjct: 174 VEFGFLLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTILIAGWCKLRRIDMAEKFLVEM 233
Query: 294 VAEGFSPDSLTFSFLIEGLGRAG----------RIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ G P+ +T++ L+ G+ R + +A +VFD M+++G PD +++ V
Sbjct: 234 IESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVTSFSIV 293
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ Y + + K M + P ++TYT ++ L ++ +A E+ E M++ GI
Sbjct: 294 LHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGI 353
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
PS+ T F + + AM +Y+K + CK S Y +LL GK + +
Sbjct: 354 SPSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKE 413
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+W +++ S D + Y ++ GLC+ + + A E + +GF P +L + L L+
Sbjct: 414 IWDDLKASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTFETLYKGLI 473
Query: 524 ASNKLESAYNLFRKI 538
SNK+ + L +K+
Sbjct: 474 QSNKMRTWRRLKKKL 488
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 104/245 (42%), Gaps = 46/245 (18%)
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
F FL++ L + G A+ VF+ KE+ G D Y +I+ + + D K+ M
Sbjct: 176 FGFLLDTLCKYGYTKMAVGVFNERKEE-FGSDEKVYTILIAGWCKLRRIDMAEKFLVEMI 234
Query: 365 SYNCEPNMDTYTRLISGLLKS----------RKVADALEVFEEMLDRGIVPSTGTITSFL 414
EPN+ TY L++G+ ++ R V +A +VF+EM RGI P +TSF
Sbjct: 235 ESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPD---VTSF- 290
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
+ MY +A K +L+L KL M+ G
Sbjct: 291 ---------SIVLHMYSRAHKA--ELTLDKMKL--------------------MKAKGIS 319
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
E Y V+ LC+ G+LE A ++E + G PS Y+ + A NL
Sbjct: 320 PTIETYTSVVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKGRKDANGAMNL 379
Query: 535 FRKIK 539
+RK+K
Sbjct: 380 YRKMK 384
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ L + LL L +G M + +++E +E + SD ++Y +IAG C + +++ A
Sbjct: 170 RFRLVEFGFLLDTLCKYGYTKMAVGVFNERKEE-FGSDEKVYTILIAGWCKLRRIDMAEK 228
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
+ E + G P+ + Y+ L N + + L R ++ A +
Sbjct: 229 FLVEMIESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEK 273
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 183/379 (48%), Gaps = 5/379 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V++Y ++ L R + + M KEG+ P+ T + +++ G+ A+++
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF 396
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+E G + ++ N ++ LC + A LF M K L V+TYN +I+G+
Sbjct: 397 HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK 456
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G V R+L + G PD T++ L+ G + G+++ A F M E G P+ +Y
Sbjct: 457 GNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSY 516
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
A+I + G D + K M C PN+++Y +I+GL K + ++A ++ ++M++
Sbjct: 517 TALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVE 576
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G++P+ T T+ ++ LC G A ++ K C +L Y L+ L GK
Sbjct: 577 QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKA-- 634
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
D M E G + Y +++GLC G+ A ++++ +GFCP R +Y L
Sbjct: 635 --DEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLI 692
Query: 521 KLLASNKLESAYNLFRKIK 539
+ +++ A +F I+
Sbjct: 693 AHCKNLEVDHALKIFHSIE 711
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 181/397 (45%), Gaps = 16/397 (4%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
E+++ FF W K P ++ + ++ L R + F ++ M K N +
Sbjct: 89 ESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEE------ 142
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
++ + L + G F S N +L L + V A +L+ M
Sbjct: 143 ---------EIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 193
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ +++T+N +I+ SK G+V E E +L +I SPD T++ LI G R +D A
Sbjct: 194 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAF 253
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
VFD M ++GC P++ Y+ +I+ + G DE + + M EP + TYT I+ L
Sbjct: 254 GVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITAL 313
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+A+E+ M RG P+ T T+ + L G A+ +Y K K G +
Sbjct: 314 CAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNT 373
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L+ L G+ L ++H M+ G ++ + Y +I GLC G +E A+++ E+
Sbjct: 374 VTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEK 433
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
L+ G P+ + Y+ L N L + +A L +K
Sbjct: 434 MLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK 470
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 179/383 (46%), Gaps = 1/383 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+++ DV +Y ++ R + D V M KEG +P+ T S +++ G+V +A
Sbjct: 228 DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEA 287
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
+ ML + + G++ + + + LC H A L MK + NV TY +ISG
Sbjct: 288 LDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISG 347
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
S+LG++ + +++ EG P+++T++ LI L GR A+++F M+ G +
Sbjct: 348 LSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLAN 407
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
T YN +I GD ++ M ++ M P + TY LI+G L V +A + +
Sbjct: 408 TQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLD 467
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
M + G P T + +G +A +++ + G + +Y L+ S G
Sbjct: 468 LMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDG 527
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K + L L M+E G + E Y VI GL + A + ++ + +G P+ + Y+
Sbjct: 528 KVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYT 587
Query: 517 KLSNKLLASNKLESAYNLFRKIK 539
L + L + + + A+ +F ++
Sbjct: 588 TLIDGLCRNGRTQFAFKIFHDME 610
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 187/415 (45%), Gaps = 41/415 (9%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
++ + +GN++ A +L +K D +YN +V + + +M
Sbjct: 449 LINGYLTKGNVNNAARLLDL---MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 505
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+ G+NP+ + + ++D + G+V A+ +L R+E+ G + ES
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVES--------------- 550
Query: 251 AASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
YN VI+G SK + E E++ ++V +G P+ +T++ LI+
Sbjct: 551 -------------------YNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLID 591
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
GL R GR A ++F M+++ C P+ Y+++I G DE + MS CEP
Sbjct: 592 GLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAER----MSEIGCEP 647
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
+DTY+ L+SGL + + +A ++ ++M +RG P S L C A+ ++
Sbjct: 648 TLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIF 707
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
G +L L+ Y+ L+ L G+ L+ M E + +D ++ ++ GL
Sbjct: 708 HSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKE 767
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQND 545
G+L+ + ++ K F P+ Y L +L K + L K+K+ + ++
Sbjct: 768 GELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLKVLKDSN 822
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 179/376 (47%), Gaps = 1/376 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S N ++ L + + + N+ M G+ P L T + +++ + G+V +A +L ++
Sbjct: 165 SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQI 224
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ L D + ++ C+ ++ A +F+ M K N +TY+ +I+G G+V
Sbjct: 225 FQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRV 284
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E +L+E++ +G P T++ I L ++AIE+ MK++GC P+ Y A+
Sbjct: 285 DEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTAL 344
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS +G + + Y M PN TY LI+ L + + AL++F M G
Sbjct: 345 ISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGS 404
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+ +T T ++ LC G AM++++K K+G ++ Y L+ G
Sbjct: 405 LANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAAR 464
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L M+E+G D Y +++G G+LE+A +E + G P+ + Y+ L +
Sbjct: 465 LLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHS 524
Query: 524 ASNKLESAYNLFRKIK 539
K++ A +L ++++
Sbjct: 525 KDGKVDIALSLLKRME 540
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 178/362 (49%), Gaps = 1/362 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+VA DV +YN I+++L VL + PD+ T +I++++ V +A
Sbjct: 203 SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQA 262
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISG 276
+++L + G K D + NV++ +C+ + A N+M NV+T+NI++
Sbjct: 263 MKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRS 322
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
G+ ++ ER+L +++ +G SP +TF+ LI L R + AI+V + M + GC P+
Sbjct: 323 MCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPN 382
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+ +YN ++ + D ++Y + M S C P++ TY L++ L K KV A+E+
Sbjct: 383 SLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILN 442
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
++ +G P T + ++ L G A+ + ++ R+ G K + Y LLR L G
Sbjct: 443 QLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREG 502
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K + ++H+M+ Y ++ GLC Q A+ + + KG P+ Y+
Sbjct: 503 KVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYT 562
Query: 517 KL 518
L
Sbjct: 563 IL 564
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 191/407 (46%), Gaps = 7/407 (1%)
Query: 134 KVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG 193
K+V G L E + F I ++ DV + +++ R ++ + G
Sbjct: 115 KLVRNGEL--EEGLKFLERMIYQGDIP-DVIACTSLIRGFCRSGKTKKATRIMEILENSG 171
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAAS 253
PD+ T ++++ + ++G++ KA+++L R+ + D + N +L LC + A
Sbjct: 172 AVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAM 228
Query: 254 SLFN-SMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
+ + ++ + +V+TY I+I V + ++L E+ +G PD +T++ LI G+
Sbjct: 229 EVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGI 288
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
+ GR+D+AI+ + M GC P+ +N ++ + S G + + + M C P++
Sbjct: 289 CKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSV 348
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
T+ LI+ L + R + A++V E+M G VP++ + L C A+ +
Sbjct: 349 VTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEI 408
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
GC + Y LL L GK +++ +++ G Y VI GL +G+
Sbjct: 409 MVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 468
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
E AV ++EE RKG P + YS L L K++ A +F ++
Sbjct: 469 TEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDME 515
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 152/312 (48%), Gaps = 3/312 (0%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
G+AM L ++ DV +YNV++ + + D L++M G P++ T +
Sbjct: 260 GQAMKLLDE--MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHN 317
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KG 261
I++ S G+ A ++L + G + N+++ LC++ +G A + M K
Sbjct: 318 IILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKH 377
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
+ N ++YN ++ G+ + ++ L+ +V+ G PD +T++ L+ L + G++D A
Sbjct: 378 GCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAA 437
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+E+ + + KGC P YN VI VG + ++ + M +P++ TY+ L+ G
Sbjct: 438 VEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRG 497
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L + KV +A+++F +M I PS T + + LC A+ + GCK +
Sbjct: 498 LGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPT 557
Query: 442 LTAYKLLLRRLS 453
Y +L+ ++
Sbjct: 558 EATYTILIEGIA 569
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 134/290 (46%), Gaps = 4/290 (1%)
Query: 249 VGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
+G SS + G F NI + + G++ E + L+ ++ +G PD + + L
Sbjct: 89 IGMESSPIG-VNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSL 147
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I G R+G+ A + + ++ G PD YN +I Y G+ D+ ++ + MS
Sbjct: 148 IRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---V 204
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P++ TY ++ L S K+ +A+EV + L R P T T +E C+ AM
Sbjct: 205 APDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMK 264
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ + RK GCK + Y +L+ + G+ + + M G + + ++ +C
Sbjct: 265 LLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMC 324
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ G+ +A ++ + LRKG PS + ++ L N L L A ++ K+
Sbjct: 325 STGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKM 374
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 177/380 (46%), Gaps = 4/380 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y IV L + K ++ + G P + T + +++ + G++ +AI +L
Sbjct: 164 DIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL 223
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSK 279
++ D G D + ++ L + A LF M +G VL + + Y +I G +
Sbjct: 224 RKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVL-DTVCYTALIRGLLQ 282
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G++ + V K + ++G PD +T S +I+GL +AGRI A+ +F +M+ +G P+
Sbjct: 283 AGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVV 342
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y+A+I D ++ M C P+ TY LI GL KS V A F+EML
Sbjct: 343 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEML 402
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
+ G P T + C G AA ++ C ++ Y L+ L +
Sbjct: 403 EAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLT 462
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ M+E G P D +Y ++ GLC G+LE ++ +E R G S+ ++L
Sbjct: 463 KASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQ-TRTRLI 521
Query: 520 NKLLASNKLESAYNLFRKIK 539
L +N+++ A +LF I+
Sbjct: 522 FHLCKANRVDEAVSLFNAIR 541
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 187/420 (44%), Gaps = 47/420 (11%)
Query: 162 DVKSYNVIVK--ALGRRKFFDFMCNVLSDMAKE-GVNPDLETLSIVMDSFIRAGQVYKAI 218
DV+++NV++ L R F V+ +M ++ GV P L+T ++V+ ++G+V A+
Sbjct: 93 DVETWNVLITGYCLAREPEEAFA--VIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAM 150
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
G D + ++ L + + A +L + + TYN +++G
Sbjct: 151 DHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGL 210
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR----------------------- 314
K+G++ E +L++IV G +PD +T++ LI+GLG+
Sbjct: 211 CKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDT 270
Query: 315 ------------AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
AG+I A V+ TM +GC PD + +I G ++ +K
Sbjct: 271 VCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKS 330
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M + PN Y+ LI GL K+RK+ ALE+ +M P T T ++ LC G
Sbjct: 331 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 390
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG---MLLDLWHEMQESGYPSDGEI 479
AA + + + GCK + Y +L +SGF K G ++ +M S +
Sbjct: 391 VEAARAFFDEMLEAGCKPDVYTYNIL---VSGFCKAGNTDAACGVFDDMSSSHCSPNVVT 447
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y +I+GLC QL A L + +G P VYS L + L S KLE LF +++
Sbjct: 448 YGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEME 507
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 159/314 (50%), Gaps = 2/314 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y ++ LG+ K + +MA G+ D + ++ ++AG++ +A +
Sbjct: 234 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVY 293
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
+ G D +L+ ++ LC+ +GAA +F SM+ + L N + Y+ +I G K
Sbjct: 294 KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 353
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
++ +L ++ +PD++T++ LI+GL ++G ++ A FD M E GC PD Y
Sbjct: 354 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 413
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N ++S + G+ D + MSS +C PN+ TY LISGL K R++ A F+ M +
Sbjct: 414 NILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKE 473
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
RG P + +S ++ LC G M++ + + G S T +L+ L +
Sbjct: 474 RGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIF-HLCKANRVDE 532
Query: 461 LLDLWHEMQESGYP 474
+ L++ +++ G P
Sbjct: 533 AVSLFNAIRKEGMP 546
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 151/317 (47%), Gaps = 2/317 (0%)
Query: 227 FGLKFDAESLNVVLWCLCQ-RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE 285
FG + + N +L + + H A + L N + L +V T+N++I+G+ + E
Sbjct: 53 FGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEE 112
Query: 286 MERVLKEIVAE-GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
V++E+ + G +P T + ++ GL ++G++ A++ F+T GC D + Y A++
Sbjct: 113 AFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIV 172
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ + + +++ C P + TY L++GL K ++ +A+++ +++D G
Sbjct: 173 DWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 232
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P T TS ++ L A ++K+ G L Y L+R L GK +
Sbjct: 233 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSV 292
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+ M G D +I GLC G++ AV + + +G P+ +VYS L + L
Sbjct: 293 YKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 352
Query: 525 SNKLESAYNLFRKIKIA 541
+ K++ A + ++K A
Sbjct: 353 ARKMDCALEMLAQMKKA 369
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 36/228 (15%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y+ ++ L + + D +L+ M K PD T +I++D ++G V A +
Sbjct: 343 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEML 402
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVV 284
+ G K D + N+++ C+ + AA +F+ M NV+TY +ISG K Q+
Sbjct: 403 EAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLT 462
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG---------------------------- 316
+ + + G PDS +S L++GL ++G
Sbjct: 463 KASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIF 522
Query: 317 ------RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
R+D+A+ +F+ ++++G P AYN++IS I + C +
Sbjct: 523 HLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISTLIKSAKVNPCTR 569
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ + +V +Y ++ L +R+ M + G PD S ++D ++G++
Sbjct: 440 HCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGG 499
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGW 277
+ +E G+ ++++ +++ LC+ V A SLFN+++ + + + YN +IS
Sbjct: 500 CMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISTL 558
Query: 278 SKLGQVVEMER 288
K +V R
Sbjct: 559 IKSAKVNPCTR 569
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 170/364 (46%), Gaps = 1/364 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++N+++ + F +VL+ + K G PD+ TL+ + F GQ+++A+ +L
Sbjct: 105 TFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKL 164
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
G D S ++ LC+ AA L + GK V N + YN VI G SK V
Sbjct: 165 VALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHV 224
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ + E+VA+ SPD +T+S LI G G++ DAI++F+ M + PD +N +
Sbjct: 225 NDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNIL 284
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ + G + M + +PN+ T+ L+ G K RK+ + VF M+ +GI
Sbjct: 285 VDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGI 344
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T S ++ C + A ++ + G ++ +Y +++ K +
Sbjct: 345 KPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMK 404
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L+ EM D Y +I GLC G++ A ++ E +G P+ + Y+ + N LL
Sbjct: 405 LFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALL 464
Query: 524 ASNK 527
K
Sbjct: 465 TKLK 468
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 142/285 (49%), Gaps = 24/285 (8%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN ++ + + K + ++ S+M + ++PD+ T S ++ F G++ AI + ++
Sbjct: 211 YNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMI 270
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
+K D + N+++ C+ + A ++ + M + + NV T+N ++ G+ K ++
Sbjct: 271 LENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMK 330
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E + V ++ +G P+ +T+ L++G +++ A ++F+TM ++G + ++YN +I
Sbjct: 331 EGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMI 390
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG-- 402
+ + + D+ MK + M + P++ TY LI GL KS K++ A ++ EM DRG
Sbjct: 391 NGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQP 450
Query: 403 ---------------------IVPSTGTITSFLEPLCSYGPPHAA 426
I P+ T T ++ LC G AA
Sbjct: 451 PNIITYNSILNALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAA 495
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 128/248 (51%), Gaps = 23/248 (9%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N+ DV ++N++V + NVL M + + P++ T + ++D F + ++ +
Sbjct: 273 NIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEG 332
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWC-----LCQRLHVGAASSLFNSMKGK-VLFNVMTYN 271
+ + G+K NVV +C C V A +FN+M + V NV +YN
Sbjct: 333 KTVFAMMMKQGIK-----PNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYN 387
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
I+I+G+ K+ +V + ++ E+ + PD +T++ LI+GL ++G+I A ++ + M ++
Sbjct: 388 IMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDR 447
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G P+ YN++++ ++ + +PNM T T LI GL +S K+ A
Sbjct: 448 GQPPNIITYNSILNALLT------------KLKDQGIQPNMHTDTILIKGLCQSGKLEAA 495
Query: 392 LEVFEEML 399
+VFE++L
Sbjct: 496 RKVFEDLL 503
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 91/225 (40%)
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+ +D A+ +F+++ + +N ++ + + + + + M PN
Sbjct: 45 HSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFV 104
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
T+ LI+ + + A V ++L G P T+ +F++ C G H A+ + K
Sbjct: 105 TFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKL 164
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
+G L +Y L+ L G+ L L + + +Y VI G+ +
Sbjct: 165 VALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHV 224
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+A + E + K P + YS L KL+ A +LF K+
Sbjct: 225 NDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKM 269
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/288 (19%), Positives = 117/288 (40%), Gaps = 1/288 (0%)
Query: 249 VGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
V A SLFNS+ +N ++ K + + +++ EG +P+ +TF+
Sbjct: 49 VDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNI 108
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI + G I A V + + G PD N I + G + + ++ + +
Sbjct: 109 LINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALG 168
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
+ +Y LI+GL K + AL++ + + + + + ++ + + A
Sbjct: 169 FHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAF 228
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+Y + + Y L+R GK +DL+++M D + ++ G
Sbjct: 229 DLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGF 288
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
C G+L+ A V++ + + P+ ++ L + K++ +F
Sbjct: 289 CKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVF 336
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 36/199 (18%), Positives = 80/199 (40%)
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS D D + + + N + +++ L+KS+ L + ++M GI
Sbjct: 40 ISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGI 99
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T + C G A + K K+G + + ++ G+ L+
Sbjct: 100 NPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALN 159
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
++ G+ D Y +I GLC +G+ A+ ++ K + ++Y+ + + +
Sbjct: 160 FHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMS 219
Query: 524 ASNKLESAYNLFRKIKIAR 542
+ A++L+ ++ R
Sbjct: 220 KDKHVNDAFDLYSEMVAKR 238
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 191/404 (47%), Gaps = 3/404 (0%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
N + EA+ L +K D+ +Y ++ L +R D N+L+ M K + D+
Sbjct: 184 NKASEAVALVERMVVK--GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 241
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
S V+DS + V A+ + +++ G++ D + + ++ CLC AS L + M
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 260 -KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+ K+ NV+T+N +I ++K G+++E E++ E++ P+ +T++ LI G R+
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
D+A ++F M K C PD YN +I+ + + M+ ++ MS N TYT L
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I G ++ +A VF++M+ G+ P+ T + L+ LC G AM++++ +K
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ + Y ++ + GK DL+ + G D Y +I+G C G E A
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+ + G P Y+ L L ++ L ++++ R
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCR 585
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 185/379 (48%), Gaps = 1/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D ++ +V L + ++ M +G PDL T V++ + G+ A+ +L
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++E ++ D + V+ LC+ HV A +LF M K + +V TY+ +IS
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ + R+L +++ +P+ +TF+ LI+ + G++ +A ++FD M ++ P+ Y
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N++I+ + DE + + M S +C P++ TY LI+G K++KV D +E+F +M
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR 408
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
RG+V +T T T+ + A M++K+ G ++ Y LL L GK
Sbjct: 409 RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 468
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ ++ +Q+S D Y + G+C G++E+ + KG P + Y+ + +
Sbjct: 469 AMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMIS 528
Query: 521 KLLASNKLESAYNLFRKIK 539
E AY LF K+K
Sbjct: 529 GFCKKGLKEEAYTLFIKMK 547
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 168/364 (46%), Gaps = 7/364 (1%)
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNV 238
D ++ +M K P + S ++ + + + I ++E G+ + + N+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 239 VLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
++ CLC+R + A ++ M K +++T N +++G+ ++ E ++ ++V G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
+ PD++TF+ L+ GL + + +A+ + + M KGC PD Y AVI+ G+ D +
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
M E ++ Y+ +I L K R V DAL +F EM ++GI P T +S + L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYP 474
C+YG A + + ++ + L + F K G L++ L+ EM +
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSL---IDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
+ Y +I G C +L+ A + + K P + Y+ L N + K+ L
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 535 FRKI 538
FR +
Sbjct: 403 FRDM 406
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/484 (22%), Positives = 202/484 (41%), Gaps = 57/484 (11%)
Query: 98 PEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHP 157
P LRG++ L G E N + L LD EA+ LF P
Sbjct: 15 PSFCLRGIYFSGLSYDGYREKLSRNALLHLKLD-------------EAVDLFGEMVKSRP 61
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ ++ ++ A+ + K FD + + M GV+ +L T +I+++ R Q+ A
Sbjct: 62 --FPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFA 119
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG 276
+ +LG++ G +LN +L C + A +L + M + + +T+ ++ G
Sbjct: 120 LAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 179
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG-------------------- 316
+ + E +++ +V +G PD +T+ +I GL + G
Sbjct: 180 LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 239
Query: 317 ---------------RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+DDA+ +F M KG PD Y+++IS + G + + +
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M PN+ T+ LI K K+ +A ++F+EM+ R I P+ T S + C +
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGE 478
A ++ C + Y L ++GF K ++D L+ +M G +
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTL---INGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y +I G +NA +V ++ + G P+ + Y+ L + L + KLE A +F +
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 539 KIAR 542
+ ++
Sbjct: 477 QKSK 480
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 3/236 (1%)
Query: 162 DVKSYNVIVKALGR-RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
DV +YN ++ + +K D M + DM++ G+ + T + ++ F +A A +
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGM-ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSK 279
++ G+ + + N +L LC+ + A +F + K K+ ++ TYNI+ G K
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G+V + + + +G PD + ++ +I G + G ++A +F MKE G PD+
Sbjct: 498 AGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGT 557
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
YN +I ++ GD + K M S + TY + L R LEV
Sbjct: 558 YNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFLEVL 613
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 179/399 (44%), Gaps = 1/399 (0%)
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
VL+ + ++ + ++ + N+++ + F +V + + K G PD T + ++
Sbjct: 104 VLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIK 163
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLF 265
GQ+ +A ++ G FD S ++ LC+ AA L + G V
Sbjct: 164 GLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQP 223
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
NV+ YN +I K+ V E + E++++G SPD +T+S LI G G+++DAI++F
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLF 283
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ M + PD +N +++ + G E + M +PN TY L+ G
Sbjct: 284 NKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLV 343
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
++V A +F M G+ P + + + C AM ++K+ + + Y
Sbjct: 344 KEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTY 403
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ LS G+ L L +M + G P Y ++ LC I Q++ A+ ++ +
Sbjct: 404 SSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKD 463
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
KG P+ YS L L S KLE A +F + + N
Sbjct: 464 KGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHN 502
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 185/385 (48%), Gaps = 37/385 (9%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V +V YN I+ ++ + K + ++ S+M +G++PD+ T S ++ F
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFC--------- 271
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGW 277
+LG+L D A LFN M + +V T+NI+++ +
Sbjct: 272 -ILGKLND-------------------------AIDLFNKMILENIKPDVYTFNILVNAF 305
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G++ E + V ++ +G P+ +T++ L++G ++ A +F+TM + G PD
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+Y+ +I+ + + FDE M +K M N P++ TY+ LI GL KS +++ AL++ ++
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M DRG+ P+ T S L+ LC A+ + K + G + ++ Y +L++ L GK
Sbjct: 426 MHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGK 485
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
++ + G+ + + Y +I G C G A+ ++ + G P Y
Sbjct: 486 LEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545
Query: 518 LSNKLLASNKLESAYNLFRKIKIAR 542
+ L ++ + A L R++ IAR
Sbjct: 546 IILSLFKKDENDMAEKLLREM-IAR 569
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 185/376 (49%), Gaps = 12/376 (3%)
Query: 99 EERLRGVFLQKLKGKGVIEDA-LWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHP 157
E R LQ++ G V + ++N +D V K+VN EA LF K
Sbjct: 205 ETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKV--KLVN------EAFDLFSEMISK-- 254
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
++ DV +Y+ ++ + ++ + M E + PD+ T +I++++F + G++ +
Sbjct: 255 GISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG 276
+ + G+K + + N ++ C V A S+FN+M +G V ++ +Y+I+I+G
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMING 374
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K+ + E + KE+ + PD +T+S LI+GL ++GRI A+++ D M ++G P
Sbjct: 375 FCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPT 434
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN+++ + D+ + + +PNM TY+ LI GL +S K+ DA +VFE
Sbjct: 435 IRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFE 494
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+L +G + T T ++ C G + A+ + K GC Y++++ L
Sbjct: 495 GLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKD 554
Query: 457 KCGMLLDLWHEMQESG 472
+ M L EM G
Sbjct: 555 ENDMAEKLLREMIARG 570
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 153/347 (44%), Gaps = 1/347 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
+ + P + ++ S +++ + + + ++E G+K + + N+++ C CQ
Sbjct: 76 LLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGL 135
Query: 249 VGAASSLFNS-MKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ A S+F +K + + +T+ +I G GQ+ + ++VA GF D +++
Sbjct: 136 IPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGT 195
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI GL + G A+++ + P+ YN +I + V +E + M S
Sbjct: 196 LIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKG 255
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
P++ TY+ LISG K+ DA+++F +M+ I P T + C G
Sbjct: 256 ISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGK 315
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++ K G K + Y L+ + +++ M + G D + Y +I G
Sbjct: 316 TVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGF 375
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
C I + + A+ + +E RK P + YS L + L S ++ A L
Sbjct: 376 CKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQL 422
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 95/221 (42%)
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
+DDA+ +F+ + + P +N ++ + + + + + M +PN+
Sbjct: 66 VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
LI+ + + A VF ++L G VP T T T+ ++ LC G A + + K +G
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALG 185
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
+Y L+ L G+ LDL + + + +Y +I +C + + A
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ E + KG P + YS L + KL A +LF K+
Sbjct: 246 DLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM 286
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 40/201 (19%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EAM LF + N+ DV +Y+ ++ L + + ++ M GV P + T +
Sbjct: 383 EAMNLF--KEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNS 440
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KG 261
++D+ + QV KAI +L +L+D G++ + + ++++ LCQ + A +F + KG
Sbjct: 441 ILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKG 500
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEM----------------------------------- 286
L NV TY I+I G+ G E
Sbjct: 501 HNL-NVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMA 559
Query: 287 ERVLKEIVAEGFSPDSLTFSF 307
E++L+E++A G P + F
Sbjct: 560 EKLLREMIARGVRPRQIAIWF 580
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 70/168 (41%)
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
N +Y+ + + V DA+ +F +L R P L L H + +
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
+K G K +L +L+ G ++ ++ + GY D + +I GLC
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GQ++ A L ++ + GF ++ Y L + L + +A +L +++
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV 216
>gi|225425882|ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial [Vitis vinifera]
Length = 496
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 201/422 (47%), Gaps = 5/422 (1%)
Query: 113 KGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKA 172
K ++ D N + +S ++V +++R ++ + F WA ++Y+++V
Sbjct: 63 KSLVHDEACNA-IPMSQNLVDVLLHRFKDDWKSALGLFRWAESRLGYEHAPEAYDMMVDI 121
Query: 173 LGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
LG+ K D M ++ +M ++G L T++ M AG+ A+++ L +F L+ +
Sbjct: 122 LGKLKQVDKMRALMEEM-RQGNLVRLSTVAKAMRRLAGAGEWEDAVRVFDDLGNFELEKN 180
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
ES+N++L LC+ V A ++F +K + N T+NI I GW K +V E E ++E
Sbjct: 181 TESMNLLLDTLCKERKVEQARAIFLELKPHISPNTHTFNIFIHGWCKANRVDEAEWTIQE 240
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+ G P +++S +I+ R E+ D M+ +GC P+ Y ++ + V
Sbjct: 241 MKGHGCRPCVISYSTIIQSYCRQSNFRKVYELLDDMQAQGCAPNVVTYTTIMCSLTKVEQ 300
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE-EMLDRGIVPSTGTIT 411
F+E ++ + M S C+P+ Y LI L ++ ++ +A+ VFE EM G+ P+T T
Sbjct: 301 FEEALQIAERMRSVGCKPDTLFYNALIHTLGRAGQLREAVRVFEVEMPKTGVPPNTSTYN 360
Query: 412 SFLEPLCSYGPPHAAMMMYKKARK-VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
S + C + A+ + ++ CK + Y +L+ GK L + +M
Sbjct: 361 SMIAMFCHHSQEQKALNLLREIENSTFCKPDIQTYYPVLKSCFKTGKIDSLSNFLDDMVN 420
Query: 471 SGYPS-DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
+ S D Y +I GLC + E + EE + K P + L +++ N +
Sbjct: 421 KHHLSLDVSAYTLLIHGLCRANKCEWGYNLFEEMVGKAITPRYKTCALLLDEIKQKNMHD 480
Query: 530 SA 531
+A
Sbjct: 481 AA 482
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 105/242 (43%), Gaps = 8/242 (3%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
G+ + +++ LG+ ++D + + M++ G + + G++++
Sbjct: 107 GYEHAPEAYDMMVDILGKLKQVDKMRALMEEMRQ-GNLVRLSTVAKAMRRLAGAGEWEDA 165
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
++ + + ++ E N ++ L+ L K RKV A +F E L I P+T T F+
Sbjct: 166 VRVFDDLGNFELEKNTESMNLLLDTLCKERKVEQARAIFLE-LKPHISPNTHTFNIFIHG 224
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR---RLSGFGKCGMLLDLWHEMQESGY 473
C A ++ + GC+ + +Y +++ R S F K LLD +MQ G
Sbjct: 225 WCKANRVDEAEWTIQEMKGHGCRPCVISYSTIIQSYCRQSNFRKVYELLD---DMQAQGC 281
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
+ Y ++ L + Q E A+ + E G P L Y+ L + L + +L A
Sbjct: 282 APNVVTYTTIMCSLTKVEQFEEALQIAERMRSVGCKPDTLFYNALIHTLGRAGQLREAVR 341
Query: 534 LF 535
+F
Sbjct: 342 VF 343
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 194/401 (48%), Gaps = 2/401 (0%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+V+ ++ + D+ S+N+++K F + + K G++PD+ T + ++
Sbjct: 97 LVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLL 156
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF 265
+V +A+ ++ + + + + ++ LC+ + A +L + M L
Sbjct: 157 HGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQ 216
Query: 266 NV-MTYNIVISGWSKLGQVVEMERVLKEIV-AEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+TY ++ G K G V +L+++ P+ + +S +I+ L + GR DA
Sbjct: 217 PTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQN 276
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+F M+EKG PD YN++I + S G + + + + M P++ TY LI+ +
Sbjct: 277 LFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFV 336
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
K K +A E+++EML RGI+P+T T +S ++ C AA M+ GC +L
Sbjct: 337 KEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLI 396
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
+ L+ G + ++L HEM E+G +D Y +I G +G L A+ +++E
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
+ G CP + L + L + KL+ A +F+ ++ ++++
Sbjct: 457 ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 190/431 (44%), Gaps = 47/431 (10%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
++ +V Y+ I+ +L + N+ ++M ++G+ PDL T + ++ F +G+ A
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDA 309
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
Q+L + + + D + N ++ + A L++ M + ++ N +TY+ +I G
Sbjct: 310 EQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDG 369
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K ++ E + + +G SP+ +TF+ LI+G A RIDD +E+ M E G D
Sbjct: 370 FCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVAD 429
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGM-SSYNC--------------------------- 368
T YN +I + VGD + + + M SS C
Sbjct: 430 TTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFK 489
Query: 369 ------------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
EP++ TY LISGL+ K +A E++EEM RGIVP T T
Sbjct: 490 VMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 549
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+S ++ LC A M+ ++ + L+ G+ L+L+ EM
Sbjct: 550 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 609
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G ++ Y +I G +G + A+ + +E + G P + + L + +L+
Sbjct: 610 RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 669
Query: 531 AYNLFRKIKIA 541
A + K++++
Sbjct: 670 AVAMLEKLQMS 680
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/170 (19%), Positives = 78/170 (45%)
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P++ + +L+ +++ + + ++++M + I + ++ CS A+
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ K K+G + + LL L + LD +H+M E+ + + ++ GLC
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G++ AV +++ + G P+++ Y + + + SA NL RK++
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKME 246
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 210/426 (49%), Gaps = 25/426 (5%)
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
V FN ++ +++ +N I+ +L + K + + + M G+ P+L +I+++
Sbjct: 47 VSLFNRLLQQNPTPPNIE-FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILIN 105
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVL--WCLCQRLH-----VGA---ASSLF 256
SF + G + A +L ++ G K + +LN ++ CL ++H VG A LF
Sbjct: 106 SFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLF 165
Query: 257 NSMKGKVLFN----VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
N M +L N V T+ I++ G+ K G+V E + VL ++ +G P +T++ L++G
Sbjct: 166 NKM---ILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGY 222
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
+++ A +F+TM + G PD +Y+ +I+ + + DE M+ K M PN+
Sbjct: 223 FLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNV 282
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
TY+ LI GL KS K++ AL++ +EM DRG P+ T +S L+ LC A+ + +
Sbjct: 283 VTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQ 342
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+ G + ++ Y +L++ L GK ++ ++ G+ + Y +I G C+ G
Sbjct: 343 MKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGL 402
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI-------KIARQND 545
+ A+ ++ + G P+ Y + L ++ E A L ++ ++A ND
Sbjct: 403 FDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTND 462
Query: 546 YARRLW 551
+W
Sbjct: 463 LIASIW 468
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 149/356 (41%), Gaps = 61/356 (17%)
Query: 14 LSSLSSSFSLFS--FSTSVRSN-LSYNELLSNQKKNMSSLDEHHV---LKELSDLF-QIS 66
L + S+FS+ + + N ++ N L+ N D+H + LK+ DLF ++
Sbjct: 110 LGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMI 169
Query: 67 SHNSFPNVY----------KESRSNSVKRIDSSRAVDEF----LLPEERLRGVFLQKLKG 112
N P+VY KE R K + + + + + G FL K
Sbjct: 170 LENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVN 229
Query: 113 KG-VIEDALWNVNVDLSLDVVGKVVN---RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNV 168
K I + + + V + ++N + + EAM L + H + +V +Y+
Sbjct: 230 KAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELL--KEMHHKQIIPNVVTYSS 287
Query: 169 IVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
++ L + + ++ +M G P++ T S ++D+ + QV AI +L ++++ G
Sbjct: 288 LIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQG 347
Query: 229 LKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMER 288
++ N+ TY I+I G + G++ + +
Sbjct: 348 IQ----------------------------------PNMYTYTILIKGLCQSGKLEDARK 373
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
V ++++ +G + + T++ +I+G G D+A+ + M++ GC P+ Y +I
Sbjct: 374 VFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIII 429
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/262 (18%), Positives = 98/262 (37%), Gaps = 45/262 (17%)
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
+DDA+ +F+ + ++ P +N ++ + + + + + M +PN+
Sbjct: 43 VDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 102
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM-------- 429
LI+ + + A V ++L G P+T T+ + ++ LC G H +
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAV 162
Query: 430 ------------------------------YKKARKV-------GCKLSLTAYKLLLRRL 452
K+A+ V G K + Y L+
Sbjct: 163 DLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGY 222
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
+ +++ M + G D + Y +I G C I ++ A+ +++E K P+
Sbjct: 223 FLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNV 282
Query: 513 LVYSKLSNKLLASNKLESAYNL 534
+ YS L + L S K+ A L
Sbjct: 283 VTYSSLIDGLCKSGKISYALKL 304
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 83/197 (42%), Gaps = 10/197 (5%)
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
D D+ + + + N P + +++ L+KS+ L + ++M RGI P+
Sbjct: 42 DVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 101
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK-------CGML--- 461
+ C G +A + K K+G K + L++ L GK G L
Sbjct: 102 ILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDA 161
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+DL+++M D + ++ G C G+++ A V+ + +G P + Y+ L +
Sbjct: 162 VDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDG 221
Query: 522 LLASNKLESAYNLFRKI 538
++ A ++F +
Sbjct: 222 YFLVKQVNKAKSIFNTM 238
>gi|255568998|ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535282|gb|EEF36959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 581
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 209/450 (46%), Gaps = 16/450 (3%)
Query: 93 DEFLLPEERLRGVFLQKLKGKGV-IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFN 151
DE L+ + + L +L G V +++ + + V +S ++V +V++R EA FF
Sbjct: 90 DEGLVQDVTIIMSILHQLSGNPVEMKNKIEHCGVKVSRELVLEVLSRIRNDWEAAFTFFL 149
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDM--AKEG---VNPDLETLSIVMD 206
WA + + V+ Y+ ++ LG+ + FD ++ +M K G V P +TL I++
Sbjct: 150 WAGRQLGYSHSVREYHAMISILGKMRKFDTAWALIDEMRGVKTGISLVTP--QTLLIMIR 207
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN 266
+ V +AI + F + +L LC+ +V A L K FN
Sbjct: 208 KYCAVHDVGRAINTFYAHKRFKFDLGIDEFQSLLSALCRYKNVQDAEHLMFCNKDVFPFN 267
Query: 267 VMTYNIVISGWSK-LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
++NIV++GW +G E +R+ +E+ D ++++ +I +AG + +++
Sbjct: 268 TKSFNIVLNGWCNVIGSPREADRIWREMCKRRIHYDVVSYASIISCYSKAGNLYKVFKLY 327
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ MKE G PD YN+VI E + K M PN TY LI L ++
Sbjct: 328 NQMKEVGIEPDRKIYNSVIFALAKGRHVSEAINLMKTMEEKGIAPNTVTYNSLIKPLCRA 387
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
RK+ +A +F+EML G P+ T +F L + + + RK+GC ++ Y
Sbjct: 388 RKIDEARGLFDEMLQHGHSPTIRTYHAFFRSLRT---GEEVFALLENMRKLGCHPTIDTY 444
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+L+R+ + + + LW+++ E+G D Y +I GL G+LE A +
Sbjct: 445 IMLIRKFCRWRQFDDVFKLWNQISENGLGPDRSSYIVLIHGLFLNGKLEEAYKFYADMKE 504
Query: 506 KGFCP----SRLVYSKLSNKLLASNKLESA 531
K P ++ + LSNK +A ++ +
Sbjct: 505 KQLLPDPKLDEMLQTWLSNKQVAECQMTES 534
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 105/246 (42%), Gaps = 11/246 (4%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG-----PDTNAYNAVISNYISVG 351
G+S + +I LG+ + D A + D M+ G P T +I Y +V
Sbjct: 156 GYSHSVREYHAMISILGKMRKFDTAWALIDEMRGVKTGISLVTPQT--LLIMIRKYCAVH 213
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP-STGTI 410
D + + + + +D + L+S L + + V DA + ++ + P +T +
Sbjct: 214 DVGRAINTFYAHKRFKFDLGIDEFQSLLSALCRYKNVQDAEHLM--FCNKDVFPFNTKSF 271
Query: 411 TSFLEPLCSY-GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
L C+ G P A ++++ K + +Y ++ S G + L+++M+
Sbjct: 272 NIVLNGWCNVIGSPREADRIWREMCKRRIHYDVVSYASIISCYSKAGNLYKVFKLYNQMK 331
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
E G D +IY VI L + A+ +M+ KG P+ + Y+ L L + K++
Sbjct: 332 EVGIEPDRKIYNSVIFALAKGRHVSEAINLMKTMEEKGIAPNTVTYNSLIKPLCRARKID 391
Query: 530 SAYNLF 535
A LF
Sbjct: 392 EARGLF 397
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 178/355 (50%), Gaps = 1/355 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN+++ + R D + ++ K+ P + T +I++++ I G + A+++L
Sbjct: 172 DVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLL 231
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ GL+ D + N ++ +C+ + V A L S+ + +++TYNI++
Sbjct: 232 DEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSR 291
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ E E+++ E+++ G P+ +T S LI L R G++++A+ + +MKEKG PD Y
Sbjct: 292 GKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCY 351
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +I+ + G D ++ + M S C P++ Y +++GL ++ K ALEVFE++ +
Sbjct: 352 DPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDE 411
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G P+ + + L S G + A+ M K G Y L+ L G
Sbjct: 412 VGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDE 471
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
++L +MQ Y + Y ++ GLC + + +A+ V+ KG P+ Y
Sbjct: 472 AIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTY 526
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 164/348 (47%), Gaps = 1/348 (0%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
PD+ + ++ FI+A Q+ A ++L R++ G D + N+++ C R + A +
Sbjct: 136 PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEI 195
Query: 256 FNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
F + K V+TY I+I G + ++L E++++G PD+LT++ +I G+ +
Sbjct: 196 FEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCK 255
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
+D A E+ ++ +GC PD YN ++ +S G + E K M S C+PN+ T
Sbjct: 256 EMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVT 315
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
++ LI L + KV +A+ + M ++G+ P + C G A +
Sbjct: 316 HSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMI 375
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
GC + Y ++ L GK L+++ ++ E G P + Y + + L + G
Sbjct: 376 SDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRY 435
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
A+ ++ + L +G P + Y+ L + L ++ A L ++ R
Sbjct: 436 RALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGR 483
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 155/351 (44%), Gaps = 7/351 (1%)
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMT 269
RAG+ +++ L + D G D ++ ++G A+ + ++ +V
Sbjct: 81 RAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVFA 140
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
YN +ISG+ K Q+ RVL + + GF PD +T++ +I G++D A+E+F+ +
Sbjct: 141 YNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELL 200
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
+ C P Y +I I G D MK M S EP+ TY +I G+ K V
Sbjct: 201 KDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVD 260
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
A E+ + RG P T L L S G + + +GCK ++ + +L+
Sbjct: 261 KAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILI 320
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
L GK ++L M+E G D Y+ +IAG C G+L+ A +E + G
Sbjct: 321 GTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCL 380
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKI-------KIARQNDYARRLWRS 553
P + Y+ + L + K + A +F K+ ++ N LW S
Sbjct: 381 PDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSS 431
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 175/383 (45%), Gaps = 12/383 (3%)
Query: 107 LQKLKGKGVIEDAL-WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L ++K +G + D + +N+ ++G +RG L + + F +K N V +
Sbjct: 161 LDRMKSRGFLPDVVTYNI-------MIGSFCSRGKL--DLALEIFEELLKD-NCEPTVIT 210
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y ++++A D +L +M +G+ PD T + ++ + V KA ++L L
Sbjct: 211 YTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLS 270
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVV 284
G K D + N++L L R L + M NV+T++I+I + G+V
Sbjct: 271 SRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVE 330
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E +L+ + +G PD+ + LI G R GR+D A E + M GC PD YN ++
Sbjct: 331 EAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIM 390
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ G D+ ++ ++ + C PN+ +Y L S L S ALE+ ++L++GI
Sbjct: 391 AGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGID 450
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P T S + LC G A+ + + + ++ +Y ++L L + +++
Sbjct: 451 PDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEV 510
Query: 465 WHEMQESGYPSDGEIYEYVIAGL 487
M E G + Y +I G+
Sbjct: 511 LAAMTEKGCQPNETTYILLIEGI 533
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 168/352 (47%), Gaps = 4/352 (1%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + PD T +I++ R+ Q+ KA Q+LGR+++ G D N ++ +
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 249 VGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
G A M K L V+TY ++ G K G+ + ++L E+ +G SP+ T++
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
++EGL ++D+A ++ + M +G PD YN+ I DE K+ M
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV-- 178
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
P++ +YT +I+GL KS + A + ++M +RG P T +S ++ C G AM
Sbjct: 179 -TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+ K+GC+ ++ AY LL L G G D+ EM+ G+ D Y I GL
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
C +++ A V + + +G P+ YS L +L +L+ A L + +
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAR 349
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 175/387 (45%), Gaps = 5/387 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K D YN ++ + K F L++M K P + T + ++D +AG+
Sbjct: 36 MKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGR 95
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
A+++L + D G + + NV++ LC+ + A + M + F +V+TYN
Sbjct: 96 TKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 155
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
I G K +V E + L + +PD ++++ +I GL ++G +D A + D M +G
Sbjct: 156 FIKGLCKCDRVDEARKFLARMPV---TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRG 212
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
C PD Y+++I + G+ + M M C PNM Y L+ L + + A
Sbjct: 213 CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAE 272
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
++ EM RG P + + ++ LC A ++ + + GC + ++Y +L+ L
Sbjct: 273 DMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEEL 332
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PS 511
+ + L + +E D +Y ++ GLC G+ + A + + L + C P
Sbjct: 333 CKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPD 392
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
Y+ + + +++ A + +++
Sbjct: 393 VFFYNVMLDSHCKRRQIDKALQIHKQM 419
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 183/385 (47%), Gaps = 6/385 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN +K L + D L+ M V PD+ + + V++ ++G + A +ML
Sbjct: 149 DVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRML 205
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
++ + G D + + ++ C+ V A L +SM K N++ YN ++ +L
Sbjct: 206 DQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 265
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + + E +L E+ GF+PD ++++ I+GL +A R+ A VFD M E+GC P+ ++Y
Sbjct: 266 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 325
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ ++ + D+ + + ++ YT L+ GL K + +A +F ++LD
Sbjct: 326 SMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLD 385
Query: 401 RGIV-PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
I P L+ C A+ ++K+ + C ++ + +L+ L +
Sbjct: 386 EKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLS 444
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ M + G+ D Y ++ +C G+ A+ + EE+++ G P + YS L
Sbjct: 445 DAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALI 504
Query: 520 NKLLASNKLESAYNLFRKIKIARQN 544
L+ N E AY LF K+ +A N
Sbjct: 505 TGLVHENMAEEAYLLFTKLDVALWN 529
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 189/449 (42%), Gaps = 71/449 (15%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V DV SY ++ L + D +L M G PD+ T S ++D F + G+V +A+
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+L + G + + + N +L L + H+G A + M+ + +V++YN I G
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE--------------------------- 310
K +V + + V +V G +P++ ++S L+E
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDI 357
Query: 311 --------GLGRAGRIDDAIEVFD-TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
GL + GR D+A +F + EK C PD YN ++ ++ D+ ++ +K
Sbjct: 358 LLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHK 417
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M NC N+ T+ L+ GL +++DA + M+D G +P T + ++ +C G
Sbjct: 418 QMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCG 476
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRL----------------------------- 452
AA+ ++++A K GC + Y L+ L
Sbjct: 477 KSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDVALWNAMILGYA 536
Query: 453 -SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG-LCNIGQLENAVLVMEESLRKGFCP 510
+G G G L L+ E+ ES + + I+G L L A + + +++ GF P
Sbjct: 537 ENGSGDLG--LKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFP 594
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKIK 539
V + L + LE A +F +K
Sbjct: 595 DLFVANTLIDVFAKCGDLEEARRIFYSMK 623
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 91/249 (36%), Gaps = 70/249 (28%)
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
++ + PD+ TF+ L+ GL R+ +++ A ++ MKE G
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMG-------------------- 40
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
C P+ Y LISG K++ A + EM+ +P+ T T+
Sbjct: 41 ---------------CVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTN 85
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
++ LC G A + L EM++ G
Sbjct: 86 IVDGLCKAGRTKDA-----------------------------------VKLLDEMRDKG 110
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
+ Y ++ GLC +L+ A ++EE +G+ P + Y+ L ++++ A
Sbjct: 111 CSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEAR 170
Query: 533 NLFRKIKIA 541
++ +
Sbjct: 171 KFLARMPVT 179
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 191/415 (46%), Gaps = 38/415 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV--NPDLETLSIVMDSFIRAGQVYKAIQ 219
DV SY++++K+L + ++L MA+ G +PD+ + V+D F + G V KA
Sbjct: 181 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACD 240
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
+ + G+ D + + V+ LC+ + A + M K VL N TYN +I G+S
Sbjct: 241 LFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYS 300
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
GQ E RV KE+ + PD +TF+ L+ L + G+I +A +VFDTM KG PD
Sbjct: 301 STGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 360
Query: 339 AY-----------------------------------NAVISNYISVGDFDECMKYYKGM 363
+Y N +I Y + G D+ M + M
Sbjct: 361 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM 420
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ +PN+ TYT +I+ L + K+ DA+E F +M+D+G+ P ++ C++G
Sbjct: 421 RDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSL 480
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A + + G L + + ++ L G+ +++ G +Y +
Sbjct: 481 LKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSML 540
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ G C +G++E A+ V + + G P+ +VY L N +++ +LFR++
Sbjct: 541 MDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREM 595
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 182/382 (47%), Gaps = 3/382 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D +Y+ +V AL + + D L M +GV P+ T + ++ + GQ +A+
Sbjct: 250 IPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAV 309
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
++ + + D + N+++ LC+ + A +F++M KG+ +V +YNI+++G
Sbjct: 310 RVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNP-DVFSYNIMLNG 368
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
++ G +V+M + ++ +G +P TF+ LI+ G +D A+ +F+ M++ G P+
Sbjct: 369 YATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPN 428
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y VI+ +G D+ M+ + M P+ Y LI G + A E+
Sbjct: 429 VLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELIS 488
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
E+++ G+ +S + LC G A ++ VG + Y +L+ G
Sbjct: 489 EIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVG 548
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K L ++ M +G + +Y ++ G C IG+++ + + E L+KG PS ++Y+
Sbjct: 549 KMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYN 608
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
+ + L + + A F ++
Sbjct: 609 IIIDGLFEAGRTVPAKVKFHEM 630
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 185/399 (46%), Gaps = 3/399 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA +F A+K N DV SYN+++ + M ++ M +G+ P + T ++
Sbjct: 342 EARDVFDTMAMKGQN--PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNV 399
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
++ ++ G + KA+ + + D G+K + + V+ LC+ + A FN M +
Sbjct: 400 LIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQG 459
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
V + Y+ +I G+ G +++ + ++ EI+ G D + FS +I L + GR+ DA
Sbjct: 460 VAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQ 519
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+FD G P Y+ ++ Y VG ++ ++ + M S EPN Y L++G
Sbjct: 520 NIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGY 579
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K ++ + L +F EML +GI PST ++ L G A + + + + G ++
Sbjct: 580 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNK 639
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y ++LR L + L+ E++ D +IAG+ ++E A +
Sbjct: 640 CTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFAS 699
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
R G P + YS + L+ +E A ++F ++ A
Sbjct: 700 ISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 738
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 167/356 (46%), Gaps = 1/356 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V +M ++ + PD+ T +++M S + G++ +A + + G D S N++L
Sbjct: 311 VFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYA 370
Query: 245 QRLHVGAASSLFNSMKGKVLFNVM-TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ + + LF+ M G + V+ T+N++I ++ G + + + E+ G P+ L
Sbjct: 371 TKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVL 430
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T++ +I L R G++DDA+E F+ M ++G PD AY+ +I + + G + + +
Sbjct: 431 TYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEI 490
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ ++ ++ +I+ L K +V DA +F+ ++ G+ P+ + ++ C G
Sbjct: 491 MNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKM 550
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+ ++ G + + Y L+ G+ L L+ EM + G +Y +
Sbjct: 551 EKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 610
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I GL G+ A + E G ++ YS + L + + A LF++++
Sbjct: 611 IDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELR 666
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 171/381 (44%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+A + ++NV++KA D + ++M GV P++ T + V+ + R G++ A+
Sbjct: 390 IAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAM 449
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS-MKGKVLFNVMTYNIVISGW 277
+ ++ D G+ D + + ++ C + A L + M + +++ ++ +I+
Sbjct: 450 EKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNL 509
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
KLG+V++ + + V G P ++ +S L++G G+++ A+ VFD M G P+
Sbjct: 510 CKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPND 569
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +++ Y +G DE + ++ M +P+ Y +I GL ++ + A F E
Sbjct: 570 VVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHE 629
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M + GI + T + L L A+ ++K+ R + K+ + ++ + +
Sbjct: 630 MTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 689
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
DL+ + SG Y +I L G +E A + G P + +
Sbjct: 690 VEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNH 749
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ +LL N++ A KI
Sbjct: 750 VVRELLKKNEIVRAGAYLSKI 770
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 159/350 (45%), Gaps = 6/350 (1%)
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVL--WCLCQRLHVGA 251
++P T +I+MD RA + A+ G+L GL+ D N +L +C +R
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166
Query: 252 ASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG---FSPDSLTFSFL 308
L + + + +V +Y+I++ G+ + + +L+ ++AEG SPD + ++ +
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR-MMAEGGAVCSPDVVAYNTV 225
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I+G + G ++ A ++F M ++G PD Y++V+ D+ + + M +
Sbjct: 226 IDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 285
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
PN TY LI G + + +A+ VF+EM + I+P T + LC YG A
Sbjct: 286 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARD 345
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++ G + +Y ++L + G + DL+ M G + +I
Sbjct: 346 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYA 405
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
N G L+ A+++ E G P+ L Y+ + L K++ A F ++
Sbjct: 406 NCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQM 455
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 199/435 (45%), Gaps = 39/435 (8%)
Query: 142 SGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN--PDLE 199
+ EA+ + + + H DV SY +++K+L + +L MA+ G P+
Sbjct: 159 TAEALDILLHR-MPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAV 217
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
+ V+D F + G V KA + + G+ D + N V+ LC+ + A ++ M
Sbjct: 218 AYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQM 277
Query: 260 KGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
K VL + TYN +I G+S GQ E RV K++ ++G PD +T + L+ L + G+I
Sbjct: 278 VDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKI 337
Query: 319 DDAIEVFDTM-------------------KEKGC----------------GPDTNAYNAV 343
DA +VFD+M KGC PD++ +N +
Sbjct: 338 KDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVL 397
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I Y G D + M EP++ TY+ +I+ L + K+ DA+E F +M+D+G+
Sbjct: 398 IKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGV 457
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
PS T ++ C++G A + + G + + + ++ L G+ +
Sbjct: 458 APSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQN 517
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
++ G + +Y ++ G C +G++ENA+ V + + G P+ +VY L N
Sbjct: 518 IFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYC 577
Query: 524 ASNKLESAYNLFRKI 538
+++ +LFR+I
Sbjct: 578 KVGRIDEGLSLFREI 592
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 195/392 (49%), Gaps = 4/392 (1%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FN ++ ++ D+ +YN +V AL + + D +L M +GV PD T + ++ +
Sbjct: 238 LFNEMVQR-GISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGY 296
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFN 266
GQ +A+++ ++ G+ D +LN ++ LC+ + A +F+SM KG+ +
Sbjct: 297 SSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKT-D 355
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
+ +Y I+++G++ G +V++ + ++++G +PDS F+ LI+ + G +D A +F+
Sbjct: 356 IFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFN 415
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M+E+G PD Y+ VI+ +G D+ ++ + M P++ TY LI G
Sbjct: 416 EMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHG 475
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+ A ++ +M+++G+ P G + LC G A ++ +G ++ Y
Sbjct: 476 DLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYN 535
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+ GK L ++ M +G + +Y ++ G C +G+++ + + E L K
Sbjct: 536 TLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHK 595
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G PS +Y+ + + L + + A F ++
Sbjct: 596 GIKPSTTLYNIILHGLFQAGRTVPAKVKFHEM 627
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 203/435 (46%), Gaps = 10/435 (2%)
Query: 108 QKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYN 167
+K+ +G++ D + ++ SL GK+ +A +F + A+K D+ SY
Sbjct: 310 KKMTSQGILPDVVTLNSLMASLCKHGKI-------KDARDVFDSMAMKGQKT--DIFSYK 360
Query: 168 VIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDF 227
+++ + + + + M +G+ PD ++++ ++ + G + +A + + +
Sbjct: 361 IMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQ 420
Query: 228 GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEM 286
G++ D + + V+ LC+ + A FN M + V ++ TY+ +I G+ G +++
Sbjct: 421 GVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKA 480
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
+ ++ +++ +G PD F+F+I L + GR+ DA +FD G P+ YN ++
Sbjct: 481 KDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDG 540
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
Y VG + ++ + M S +PN+ Y L++G K ++ + L +F E+L +GI PS
Sbjct: 541 YCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPS 600
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
T L L G A + + + + G + Y ++L L + L+
Sbjct: 601 TTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFK 660
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
E+ D +IAG+ I ++E A + R G PS + YS + L+
Sbjct: 661 ELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEG 720
Query: 527 KLESAYNLFRKIKIA 541
+E A ++F ++ A
Sbjct: 721 LVEEADDMFSSMENA 735
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 163/353 (46%), Gaps = 12/353 (3%)
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA- 252
++P L T I+MD RA + + G++ GL D ++ +L LC+ A
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEAL 163
Query: 253 SSLFNSMKG-KVLFNVMTYNIVISGWS---KLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
L + M + +V +Y IV+ K GQ E+ R++ E A P+++ ++ +
Sbjct: 164 DILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCL-PNAVAYNTV 222
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I+G + G ++ A ++F+ M ++G PD + YN V++ D+ + M
Sbjct: 223 IDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGV 282
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P+ TY LI G + + +A+ V ++M +GI+P T+ S + LC +G A
Sbjct: 283 LPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARD 342
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIA 485
++ G K + +YK++ L+G+ G L+D L++ M G D I+ +I
Sbjct: 343 VFDSMAMKGQKTDIFSYKIM---LNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIK 399
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G L+ A ++ E +G P + YS + L K++ A F ++
Sbjct: 400 AYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQM 452
>gi|226495005|ref|NP_001148062.1| GTP binding protein [Zea mays]
gi|195615570|gb|ACG29615.1| GTP binding protein [Zea mays]
Length = 535
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 182/388 (46%), Gaps = 5/388 (1%)
Query: 125 VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCN 184
V + D++ V+ + + + + FFNWA P A ++Y ++ LGR K M
Sbjct: 106 VHMDEDIILMVLQKQRSNWQVALAFFNWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQ 165
Query: 185 VLSDMAKE--GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWC 242
+ ++ +E V + +++++ + A +V +AI++ +D+G + D ++L
Sbjct: 166 LFDEIPEERRQVVVTNKMFAVLLNRYAGAHKVQEAIEVFYLRKDYGFELDLVGFQILLMS 225
Query: 243 LCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
LC+ HV A +LF K + ++NI+++GW G + + +R+ +I+A D
Sbjct: 226 LCRYKHVEEAEALFREKKDEFPHVTKSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDL 285
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
TF I L + GRI A+++F M EKG PD N +I E ++ +
Sbjct: 286 FTFGTFINALAKNGRISAAVKLFKQMWEKGINPDVAICNCIIDQLCFKKKIPEALEIFGE 345
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M+ C+ ++ TY LI + K +++ E+ ++M +G P+ T + L+ +
Sbjct: 346 MNDRLCQADVATYNTLIKYMCKIKRMEKVYELLDDMEAKGCSPNNRTYSYILK---TTEK 402
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
P + + ++ + GCKL Y L+L + + +W EM+ G D +
Sbjct: 403 PKDVIALMQRMERSGCKLDSDMYNLILNLYIKWKYEKGMQQIWDEMERRGSGPDQRSFTI 462
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCP 510
++ GL + G+L+ A+ +G P
Sbjct: 463 MVHGLHSQGKLDEALQYYTTMKSRGMIP 490
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 155/338 (45%), Gaps = 38/338 (11%)
Query: 97 LPEERLR--------GVFLQKLKGKGVIEDAL----WNVNVDLSLDVVGKVV-----NRG 139
+PEER + V L + G +++A+ + LD+VG + R
Sbjct: 170 IPEERRQVVVTNKMFAVLLNRYAGAHKVQEAIEVFYLRKDYGFELDLVGFQILLMSLCRY 229
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
EA LF + P+V KS+N+I+ + + +D+ V DL
Sbjct: 230 KHVEEAEALFREKKDEFPHV---TKSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLF 286
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
T +++ + G++ A+++ ++ + G+ D N ++ LC + + A +F M
Sbjct: 287 TFGTFINALAKNGRISAAVKLFKQMWEKGINPDVAICNCIIDQLCFKKKIPEALEIFGEM 346
Query: 260 KGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
++ +V TYN +I K+ ++ ++ +L ++ A+G SP++ T+S++++ +
Sbjct: 347 NDRLCQADVATYNTLIKYMCKIKRMEKVYELLDDMEAKGCSPNNRTYSYILKTTEKP--- 403
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE-------PN 371
D I + M+ GC D++ YN +++ YI KY KGM E P+
Sbjct: 404 KDVIALMQRMERSGCKLDSDMYNLILNLYIK-------WKYEKGMQQIWDEMERRGSGPD 456
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
++T ++ GL K+ +AL+ + M RG++P T
Sbjct: 457 QRSFTIMVHGLHSQGKLDEALQYYTTMKSRGMIPEPRT 494
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 106/243 (43%), Gaps = 41/243 (16%)
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G K+ + +E+ + K+ GF D + F L+ L R +++A +F K++
Sbjct: 192 AGAHKVQEAIEVFYLRKDY---GFELDLVGFQILLMSLCRYKHVEEAEALFREKKDEF-- 246
Query: 335 PD-TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
P T ++N +++ + G + + + + + E ++ T+ I+ L K+ +++ A++
Sbjct: 247 PHVTKSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTFGTFINALAKNGRISAAVK 306
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+F++M ++GI P ++ LC +KK
Sbjct: 307 LFKQMWEKGINPDVAICNCIIDQLC-----------FKK--------------------- 334
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
K L+++ EM + +D Y +I +C I ++E ++++ KG P+
Sbjct: 335 ---KIPEALEIFGEMNDRLCQADVATYNTLIKYMCKIKRMEKVYELLDDMEAKGCSPNNR 391
Query: 514 VYS 516
YS
Sbjct: 392 TYS 394
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 181/379 (47%), Gaps = 1/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN IV + R ++L M + V D+ T S ++DS R G + AI +
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+E G+K + N ++ LC+ + L M + ++ NV+T+N+++ + K
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ E + KE++ G SP+ +T++ L++G R+ +A + D M C PD +
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++I Y V D+ MK ++ +S N TY+ L+ G +S K+ A E+F+EM+
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G++P T L+ LC G A+ +++ +K L + Y ++ + GK
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+L+ + G + Y +I+GLC G L A +++ + G P+ Y+ L
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 521 KLLASNKLESAYNLFRKIK 539
L L ++ L ++K
Sbjct: 552 AHLRDGDLTASAKLIEEMK 570
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 167/343 (48%), Gaps = 2/343 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ V +YN +V+ L + ++ +L DM + P++ T ++++D F++ G++ +A
Sbjct: 259 IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEAN 318
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ + G+ + + N ++ C + + A+++ + M + K +++T+ +I G+
Sbjct: 319 ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ +V + +V + I G +++T+S L++G ++G+I A E+F M G PD
Sbjct: 379 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y ++ G ++ ++ ++ + + + YT +I G+ K KV DA +F
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 498
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ +G+ P+ T T + LC G A ++ +K + G + Y L+R G
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
L EM+ G+ +D + VI L + G+L+ + L M
Sbjct: 559 LTASAKLIEEMKSCGFSADASSIKMVIDMLLS-GELDKSFLDM 600
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 164/385 (42%), Gaps = 36/385 (9%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ---------- 245
P L S + R Q + +LE G+ + +LN+++ C C+
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 246 -----RLHVGAASSLFNS------MKGKV---------------LFNVMTYNIVISGWSK 279
+L ++ FN+ ++GKV +V+TYN +++G +
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G +L+++ D T+S +I+ L R G ID AI +F M+ KG
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YN+++ G +++ K M S PN+ T+ L+ +K K+ +A E+++EM+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
RGI P+ T + ++ C A M + C + + L++ +
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ ++ + + G ++ Y ++ G C G+++ A + +E + G P + Y L
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 520 NKLLASNKLESAYNLFRKIKIARQN 544
+ L + KLE A +F ++ ++ +
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMD 470
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 154/357 (43%), Gaps = 12/357 (3%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDF--GLKFDAESLNVVLWCLCQR 246
M K + +++ L ++ ++ G + +L + F + D S++ C +R
Sbjct: 2 MIKRSITTNMKALRLIQPHLLKTGSLRT--DLLCTISSFFSSCERDFSSISNGNVCFRER 59
Query: 247 LHVGA-------ASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
L G A +LF M + + L +++ ++ S ++ Q + K++ G
Sbjct: 60 LRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI 119
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
+ + T + +I R + A V + + G PDT +N +I G E +
Sbjct: 120 AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 179
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
M C+P++ TY +++G+ +S + AL++ +M +R + T ++ ++ LC
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
G AA+ ++K+ G K S+ Y L+R L GK L +M +
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ ++ G+L+ A + +E + +G P+ + Y+ L + N+L A N+
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 89/211 (42%), Gaps = 7/211 (3%)
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
D+ + ++ M P++ ++R S + ++++ L+ +++ GI + T+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
+ C A + K K+G + T + L++ L GK + L M E+G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
D Y ++ G+C G A+ ++ + + YS + + L +++A +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 534 LFRKIK-------IARQNDYARRLWRSKGWH 557
LF++++ + N R L ++ W+
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280
>gi|413939122|gb|AFW73673.1| hypothetical protein ZEAMMB73_530264 [Zea mays]
Length = 526
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 206/451 (45%), Gaps = 33/451 (7%)
Query: 107 LQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHP---NVAKDV 163
LQ L G GV LS D++ +++ R + + + + A HP N
Sbjct: 69 LQLLSGGGV----------SLSGDLLVQILLRLRGASKLALSLLHAARLHPSFVNTQPRS 118
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+Y+ +V ALGR + FD V+ D + +G T +++ ++ AG +AI+
Sbjct: 119 DAYDAVVDALGRARQFDAAWRVVVDASADGAA-SPRTFAVLARRYVAAGMTRQAIRAFDD 177
Query: 224 LEDF-GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQ 282
+E F + DA +L LC+ + A+ +FN K K N Y+I+I GW K+ +
Sbjct: 178 MEAFVSREPDAAEFATLLDTLCKYKYPKVATEVFNKRKYKYGPNEKMYSILIYGWCKVNR 237
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG------RIDDAI----EVFDTMKEKG 332
++ LK+++ G P+ +T++ L+ G+ R R D + ++ M+ +G
Sbjct: 238 SDMAKKFLKDMLVHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHAAEDLLKEMRGRG 297
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD +Y+ ++ Y + C+ ++ M P + TYT +I L ++ D
Sbjct: 298 IEPDVTSYSIILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLSSCGRLEDGE 357
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA-----YKL 447
+ +EM+ G+ PS T FL+ AA+ +Y K + G SLTA Y +
Sbjct: 358 ILLDEMVAEGVCPSPATYNCFLKEYRGRKDVTAALELYNKMKAPG---SLTAPDIHTYNI 414
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
LL S + G ++D+W +M ES D + Y +I C+ + A E + KG
Sbjct: 415 LLGMFSKLNRHGTVMDIWSDMCESTVGPDLDSYTLLIHCFCDSQKWREACQFFMEMIEKG 474
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
F P ++ + L L+ ++ L + L R++
Sbjct: 475 FLPQKITFETLYRGLIQADMLRTWRRLKRRV 505
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 121/275 (44%), Gaps = 30/275 (10%)
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
F V+ V +G ++ Q + ++ V+ PD+ F+ L++ L + A EV
Sbjct: 155 FAVLARRYVAAGMTR--QAIRAFDDMEAFVSR--EPDAAEFATLLDTLCKYKYPKVATEV 210
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F+ K K GP+ Y+ +I + V D K+ K M + EPN+ TY L++G+ +
Sbjct: 211 FNKRKYKY-GPNEKMYSILIYGWCKVNRSDMAKKFLKDMLVHGIEPNIVTYNILLNGICR 269
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+ + DR + HAA + K+ R G + +T+
Sbjct: 270 HASLHP-----DYRFDRTV--------------------HAAEDLLKEMRGRGIEPDVTS 304
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y ++L S K + L ++ M+E G Y VI L + G+LE+ ++++E +
Sbjct: 305 YSIILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLSSCGRLEDGEILLDEMV 364
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+G CPS Y+ + + +A L+ K+K
Sbjct: 365 AEGVCPSPATYNCFLKEYRGRKDVTAALELYNKMK 399
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 187/382 (48%), Gaps = 16/382 (4%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAK-EGVNPDLETLSIVMDSFIR-------AGQVYKA 217
++++VK+ F + N++ D+AK G P + + + ++DS +R A +VY+
Sbjct: 135 FDLVVKSCSYLNFIEKALNIV-DLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYR- 192
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG 276
+M+ G+ + S N+++ C ++ F M + + L NV+TYN VI
Sbjct: 193 -EMIAS----GVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGA 247
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ KL ++ E ++L+ + EG P+ LT++ +I GL R GRI++ V M KG PD
Sbjct: 248 YCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPD 307
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN +++ Y VG+F + + + M P++ TYT LI+ + K+ + A+E F+
Sbjct: 308 GVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFD 367
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+M RG+ P+ T TS + G A ++ + + G ++ Y LL G
Sbjct: 368 QMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSG 427
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ + L M+ G D Y +IAG C +L+ A + E + KG P + YS
Sbjct: 428 RMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYS 487
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
L L +L A +LF+++
Sbjct: 488 SLIQGLCEQRRLNEACDLFQEM 509
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 171/374 (45%), Gaps = 2/374 (0%)
Query: 163 VKSYNVIVKALGR-RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
V SYN I+ ++ R RK F V +M GV+ ++ + +I++ F AG + ++
Sbjct: 167 VLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFF 226
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
+E + + N V+ C+ + A L SM + L N++TYN+VI+G ++
Sbjct: 227 EEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRV 286
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ E VL E+ +GF+PD +T++ L+ G + G A+ + M G PD Y
Sbjct: 287 GRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTY 346
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++I+ G+ + M+++ M PN TYT LI+G + + +A +++EM+
Sbjct: 347 TSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIR 406
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G P+ T + L C G A+ + + G + +Y ++ + +
Sbjct: 407 SGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDR 466
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ EM E G D Y +I GLC +L A + +E L K P Y+ L N
Sbjct: 467 AFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLIN 526
Query: 521 KLLASNKLESAYNL 534
L A NL
Sbjct: 527 GYCKEGDLNEALNL 540
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 177/381 (46%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+ +V SYN++++ + +M + P++ T + V+ ++ + ++ +A
Sbjct: 199 VSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAF 258
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
++L + GL+ + + N+V+ LC+ + S + M K + +TYN +++G+
Sbjct: 259 KLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGY 318
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K+G + + E++ G PD +T++ LI + +AG ++ A+E FD M +G P+
Sbjct: 319 CKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNG 378
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y ++I+ + G DE + + M P + TY L++G S ++ +A+ +
Sbjct: 379 VTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRG 438
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M +G+ P + ++ + C Y A M + + G Y L++ L +
Sbjct: 439 MEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRR 498
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
DL+ EM D Y +I G C G L A+ + +E ++KGF P + Y+
Sbjct: 499 LNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNV 558
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L N L + A L K+
Sbjct: 559 LINGLNKQARTREAKRLLLKL 579
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 176/414 (42%), Gaps = 63/414 (15%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A D +YN +V + F + S+M + G+ PD+ T + ++++ +AG + +A++
Sbjct: 305 APDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAME 364
Query: 220 MLGRLEDFGLKFDAESL-----------------------------------NVVLWCLC 244
++ GL+ + + N +L C
Sbjct: 365 FFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHC 424
Query: 245 QRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ A L M+GK L +V++Y+ +I+G+ + ++ ++ E+V +G SPD++
Sbjct: 425 VSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAI 484
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T+S LI+GL R+++A ++F M K PD Y ++I+ Y GD +E + + M
Sbjct: 485 TYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEM 544
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
P+ TY LI+GL K + +A + ++ +P+ T + +E
Sbjct: 545 IKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIE-------- 596
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIY 480
S +K ++ + GF G++ + ++ M + + +Y
Sbjct: 597 ---------------SCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVY 641
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
+I G C G + A + +E + GF P + L K L S ++ NL
Sbjct: 642 NVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALV-KALYSEGMDEQLNL 694
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 100/242 (41%), Gaps = 5/242 (2%)
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD---FDECMK 358
S F +++ I+ A+ + D K G P +YNA++ + + F E K
Sbjct: 132 SAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAE--K 189
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
Y+ M + N+ +Y LI G + + L FEEM +P+ T + + C
Sbjct: 190 VYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYC 249
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
A + + G + +L Y +++ L G+ + EM G+ DG
Sbjct: 250 KLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGV 309
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y ++ G C +G A+++ E LR G P + Y+ L N + + L A F ++
Sbjct: 310 TYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQM 369
Query: 539 KI 540
+
Sbjct: 370 HV 371
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 184/377 (48%), Gaps = 1/377 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+K+++ ++ A G+R+ + +L +M G+ P++ T +I + R G++ +A +++
Sbjct: 229 LKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMK 288
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLG 281
R++D G D + V++ LC + A LF MK + +TY ++ +S G
Sbjct: 289 RMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCG 348
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ ++E++ E+ A+G++PD +TF+ L+ L +AGRI++A ++ DTM+++G P+ + YN
Sbjct: 349 HLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYN 408
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+IS + D+ + + M S EP TY LI KS ALE FE+M R
Sbjct: 409 TLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKAR 468
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
GI P+ + L L G A M+ + + G Y ++++ S G+
Sbjct: 469 GIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEA 528
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+ L EM + D + +I L G++E A + P+ + Y+ L
Sbjct: 529 IKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAG 588
Query: 522 LLASNKLESAYNLFRKI 538
L +++ A LF +
Sbjct: 589 LGKEGQIQKAVQLFESM 605
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 189/433 (43%), Gaps = 44/433 (10%)
Query: 115 VIEDALWNV--NVDLSL--DVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIV 170
+ ED + V N+D S DV+G ++ +G + F + + KD I+
Sbjct: 705 ITEDFFYQVGSNIDRSFWEDVMGGILTE---AGTEKAILFGERLVCRAICKDDSVLIPII 761
Query: 171 KALGRRKFFDFMCNVLSDMAKE-GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGL 229
K L + K NV KE GV P L+ ++++D F+ V A + ++ G
Sbjct: 762 KVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGC 821
Query: 230 KFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMER 288
D + N ++ + + L++ M + N +TYN+VIS K ++ +
Sbjct: 822 APDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMD 881
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
+ +V+ FSP TF LI+GL ++GR+DDA E+FD M GC P++ YN +++ Y
Sbjct: 882 LYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYG 941
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTG 408
+G D +++K M P++ +YT L+ L + +V DAL FE++ G+ P
Sbjct: 942 KLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDP--- 998
Query: 409 TITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM 468
L AY L++ L + L L+HEM
Sbjct: 999 --------------------------------DLVAYNLMINGLGRSQRTEEALSLFHEM 1026
Query: 469 QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
Q G D Y +I L +G +E A + EE G P+ Y+ L S
Sbjct: 1027 QNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNS 1086
Query: 529 ESAYNLFRKIKIA 541
E AY +++K+ +
Sbjct: 1087 ELAYGIYKKMMVG 1099
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 177/347 (51%), Gaps = 8/347 (2%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A DV ++ ++V AL + + ++L M K+GV P+L T + ++ +RA ++ A+
Sbjct: 366 APDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALD 425
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
+ +E G++ A + +++ + H G A F MK + + N++ N + +
Sbjct: 426 LFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLA 485
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
++G++ E + + E+ + G +PDS+T++ +++ + G++D+AI++ M + C PD
Sbjct: 486 EMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVI 545
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
N++I G +E + + M N P + TY L++GL K ++ A+++FE M
Sbjct: 546 VINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESM 605
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
G P+T T + L+ LC A+ M+ K + C+ + + ++ GF K
Sbjct: 606 NGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIH---GFIKQ 662
Query: 459 GMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
+ + L+H+M++ P D ++ G+ GQ+E+A + E+
Sbjct: 663 NQIKNAIWLFHQMKKLLRP-DHVTLCTLLPGVIKSGQIEDAFRITED 708
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 181/427 (42%), Gaps = 39/427 (9%)
Query: 162 DVKSYNVIVKAL-GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
DV +Y V++ AL RK D MC + + M PD T ++D F G + K ++
Sbjct: 298 DVVTYTVLIDALCTARKLDDAMC-LFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKI 356
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSK 279
+E G D + +++ LC+ + A L ++M+ + VL N+ TYN +ISG +
Sbjct: 357 WTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLR 416
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC------ 333
++ + + + + G P + T+ LI+ G++G A+E F+ MK +G
Sbjct: 417 ANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVA 476
Query: 334 -----------------------------GPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
PD+ YN ++ Y VG DE +K MS
Sbjct: 477 CNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMS 536
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
CEP++ LI L K+ +V +A ++F M + + P+ T L L G
Sbjct: 537 KVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQ 596
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A+ +++ GC + + LL L + + L ++++M D + +I
Sbjct: 597 KAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTII 656
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
G Q++NA+ + + ++K P + L ++ S ++E A+ + +
Sbjct: 657 HGFIKQNQIKNAIWLFHQ-MKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGS 715
Query: 545 DYARRLW 551
+ R W
Sbjct: 716 NIDRSFW 722
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/510 (21%), Positives = 218/510 (42%), Gaps = 24/510 (4%)
Query: 38 ELLSNQK-KNMSSLDE-----HHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRA 91
EL+ N K + SS DE H + + LF S PNV V ++
Sbjct: 78 ELVVNGKPRKGSSSDEVLGVLHSISDPIHALFYFKSVGELPNV--------VHTTETCNH 129
Query: 92 VDEFLLPEERLRGV-FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFF 150
+ E L R+ + F+ L + +I NVD L + + RG L L
Sbjct: 130 MLEILRVHRRVEDMAFVFDLMQRQIIRR-----NVDTYLIIFKSLFIRGGLRQAPSAL-- 182
Query: 151 NWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR 210
++ + SYN ++ L + F V M EG+ P L+T S +M + +
Sbjct: 183 -EKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGK 241
Query: 211 AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMT 269
+ + +L +E GL+ + + + + L + + A + M +V+T
Sbjct: 242 RRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVT 301
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
Y ++I ++ + + ++ + PD +T+ L++ G +D +++ M+
Sbjct: 302 YTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEME 361
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
G PD + +++ G +E M PN+ TY LISGLL++ ++
Sbjct: 362 ADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLD 421
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
DAL++F M G+ P+ T ++ G P A+ ++K + G ++ A L
Sbjct: 422 DALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASL 481
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
L+ G+ G +++E++ SG D Y ++ +GQ++ A+ ++ E +
Sbjct: 482 YSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCE 541
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P +V + L + L + ++E A+ +F +++
Sbjct: 542 PDVIVINSLIDTLYKAGRVEEAWQMFCRME 571
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 200/433 (46%), Gaps = 15/433 (3%)
Query: 107 LQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSY 166
+K+K +G+ + + SL +G++ GEA +F +K +A D +Y
Sbjct: 462 FEKMKARGIAPNIVACNASLYSLAEMGRL-------GEAKAMF--NELKSSGLAPDSVTY 512
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
N+++K + D +LS+M+K PD+ ++ ++D+ +AG+V +A QM R+E+
Sbjct: 513 NMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEE 572
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVE 285
L + N++L L + + A LF SM G N +T+N ++ K +V
Sbjct: 573 MNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDL 632
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
++ ++ PD LTF+ +I G + +I +AI +F MK K PD ++
Sbjct: 633 ALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMK-KLLRPDHVTLCTLLP 691
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDT--YTRLISGLLKSRKVADALEVFEEMLDRGI 403
I G ++ + + Y N+D + ++ G+L A+ E ++ R I
Sbjct: 692 GVIKSGQIEDAFRITEDF-FYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAI 750
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKK-ARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
+ ++ LC + A ++ K +++G K +L Y LL+ +
Sbjct: 751 CKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAW 810
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+L+ EM+ +G D Y +I G++ + +E L +G P+ + Y+ + + L
Sbjct: 811 NLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNL 870
Query: 523 LASNKLESAYNLF 535
+ SN+L+ A +L+
Sbjct: 871 VKSNRLDKAMDLY 883
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 183/361 (50%), Gaps = 6/361 (1%)
Query: 149 FFNWAIK---HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
F+++ + + N++ + S+N+++KAL + +F D V M + PD T +M
Sbjct: 170 FYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLM 229
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKV 263
D + ++ +A+ +L ++ G NV++ LC++ + + L ++M KG V
Sbjct: 230 DGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV 289
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
N +TYN +I G G++ + +L+ +V+ P+ +T+ LI GL + R DA+
Sbjct: 290 P-NEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVR 348
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+ +M+E+G + + Y+ +IS G +E M ++ M+ C+PN+ Y+ L+ GL
Sbjct: 349 LLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLC 408
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
+ K +A E+ M+ G +P+ T +S ++ G A+ ++K+ K GC +
Sbjct: 409 REGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKF 468
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
Y +L+ L G G+ + +W +M G D Y +I GLC IG ++ A+ + E
Sbjct: 469 CYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528
Query: 504 L 504
L
Sbjct: 529 L 529
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 201/424 (47%), Gaps = 12/424 (2%)
Query: 123 VNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYN-----VIVKALGRR- 176
V ++ S VV + + +L +A+ LF + + VKS+N +I + L R
Sbjct: 109 VIIERSFIVVFRAYGKAHLPDKAVDLFHRM-VDEFRCKRSVKSFNSVLNVIINEGLYHRG 167
Query: 177 -KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+F+D++ N +M ++P+ + ++V+ + + V +AI++ + + D +
Sbjct: 168 LEFYDYVVNSNMNM---NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYT 224
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
++ LC+ + A L + M+ + + + YN++I G K G + + +++ +
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
+G P+ +T++ LI GL G++D A+ + + M C P+ Y +I+ +
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ ++ M N Y+ LISGL K K +A+ ++ +M ++G P+ + +
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
+ LC G P+ A + + GC + Y L++ G C + +W EM ++G
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS 464
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
+ Y +I GLC +G+++ A++V + L G P + YS + L +++A L
Sbjct: 465 RNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524
Query: 535 FRKI 538
+ ++
Sbjct: 525 YHEM 528
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 128/263 (48%), Gaps = 5/263 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV +Y ++ L +++ +LS M + G + + S+++ + G+ +A+
Sbjct: 324 IPNDV-TYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAM 382
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+ ++ + G K + +V++ LC+ A + N M L N TY+ ++ G+
Sbjct: 383 SLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGF 442
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G E +V KE+ G S + +S LI+GL GR+ +A+ V+ M G PDT
Sbjct: 443 FKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDT 502
Query: 338 NAYNAVISNYISVGDFDECMKYYKGM---SSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
AY+++I +G D +K Y M +P++ TY L+ GL + ++ A+++
Sbjct: 503 VAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDL 562
Query: 395 FEEMLDRGIVPSTGTITSFLEPL 417
MLDRG P T +FL L
Sbjct: 563 LNSMLDRGCDPDVITCNTFLNTL 585
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 120/272 (44%), Gaps = 5/272 (1%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
T + +I ++ G +E++L I E +F + G+A D A+++F M
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138
Query: 329 -KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS----YNCEPNMDTYTRLISGLL 383
E C ++N+V++ I+ G + +++Y + + N PN ++ +I L
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
K R V A+EVF M +R +P T + ++ LC A+++ + + GC S
Sbjct: 199 KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
Y +L+ L G + L M G + Y +I GLC G+L+ AV ++E
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ P+ + Y L N L+ + A L
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVRLL 350
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 187/376 (49%), Gaps = 12/376 (3%)
Query: 166 YNVIVKA---LGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ V+V+A L K FD + N ++ + N L LS D A +V++
Sbjct: 188 FQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFR------ 241
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSKL 280
+ G+ ++ S N++L LCQ V A SL M +G V +V++Y++++ G+ ++
Sbjct: 242 EYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVP-DVVSYSVIVDGYCQV 300
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
Q+ ++ ++++E+ +G P+ T++ +I L + GR+ +A +V MK + PD Y
Sbjct: 301 EQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVY 360
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+IS + G+ K + M P+ TYT +I GL ++ KV +A ++F EML
Sbjct: 361 TTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLS 420
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G+ P T T+ ++ C G A ++ + + G ++ Y L+ L G+ +
Sbjct: 421 KGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDI 480
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+L HEM E G + Y +I GLC +G +E AV +MEE GF P + Y+ + +
Sbjct: 481 ANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMD 540
Query: 521 KLLASNKLESAYNLFR 536
++ A+ L R
Sbjct: 541 AYCKMGEMAKAHELLR 556
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 172/353 (48%), Gaps = 1/353 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V + ++ GV + + +I++ + G+V +A +L ++E G D S +V++ C
Sbjct: 239 VFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYC 298
Query: 245 QRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
Q +G L ++ K L N TYN +IS K G+VVE E+VL+ + + PD++
Sbjct: 299 QVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNV 358
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
++ LI G G++G + ++FD MK K PD Y ++I G E K + M
Sbjct: 359 VYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEM 418
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
S +P+ TYT LI G K+ ++ +A + +M+++G+ P+ T T+ ++ LC G
Sbjct: 419 LSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEV 478
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A + + + G + ++ Y L+ L G + L EM +G+ D Y +
Sbjct: 479 DIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTI 538
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
+ C +G++ A ++ L KG P+ + ++ L N S LE L +
Sbjct: 539 MDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIK 591
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 165/367 (44%), Gaps = 7/367 (1%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+K+ + D Y ++ G+ + +M ++ + PD T + ++ +AG
Sbjct: 347 VMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAG 406
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYN 271
+V +A ++ + GLK D + ++ C+ + A SL N M K L NV+TY
Sbjct: 407 KVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYT 466
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
++ G K G+V +L E+ +G P+ T++ LI GL + G I+ A+++ + M
Sbjct: 467 ALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLA 526
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G PDT Y ++ Y +G+ + + + M +P + T+ L++G S + D
Sbjct: 527 GFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDG 586
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+ + MLD+GI+P+ T S ++ C A + +YK G Y +L++
Sbjct: 587 ERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIK- 645
Query: 452 LSGFGKCGMLLDLW---HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
G K + + W EM E G+ Y +I G + E A + EE GF
Sbjct: 646 --GHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGF 703
Query: 509 CPSRLVY 515
+ +Y
Sbjct: 704 IAEKEIY 710
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 171/376 (45%), Gaps = 1/376 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ L + VL M + + PD + ++ F ++G V ++ +
Sbjct: 324 TYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEM 383
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQV 283
+ + D + ++ LCQ V A LF+ M K L + +TY +I G+ K G++
Sbjct: 384 KRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEM 443
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E + ++V +G +P+ +T++ L++GL + G +D A E+ M EKG P+ YNA+
Sbjct: 444 KEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNAL 503
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I+ VG+ ++ +K + M P+ TYT ++ K ++A A E+ MLD+G+
Sbjct: 504 INGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGL 563
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T + C G + K G + T + L+++ ++
Sbjct: 564 QPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIE 623
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
++ M G D Y +I G C ++ A + +E + KGF + Y+ L
Sbjct: 624 IYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFY 683
Query: 524 ASNKLESAYNLFRKIK 539
K E A LF +++
Sbjct: 684 KRKKFEEARKLFEEMR 699
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 170/354 (48%), Gaps = 1/354 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K + D +Y ++ L + + S+M +G+ PD T + ++D + +AG+
Sbjct: 383 MKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGE 442
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
+ +A + ++ + GL + + ++ LC+ V A+ L + M K L NV TYN
Sbjct: 443 MKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNA 502
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I+G K+G + + ++++E+ GF PD++T++ +++ + G + A E+ M +KG
Sbjct: 503 LINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKG 562
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P +N +++ + G ++ + K M PN T+ L+ + +
Sbjct: 563 LQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATI 622
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
E+++ M +G+VP T T ++ C A ++K+ + G L+ +Y L++
Sbjct: 623 EIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGF 682
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
K L+ EM+ G+ ++ EIY+ + G EN + + +E++ K
Sbjct: 683 YKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEK 736
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 117/253 (46%), Gaps = 5/253 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PNV +YN ++ L + + ++ +M G PD T + +MD++ + G++
Sbjct: 494 QPNVC----TYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMA 549
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
KA ++L + D GL+ + NV++ C + L M K ++ N T+N ++
Sbjct: 550 KAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLM 609
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+ + + K + A+G PD+ T++ LI+G +A + +A + M EKG
Sbjct: 610 KQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFS 669
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
+YN++I + F+E K ++ M ++ + Y + + + LE+
Sbjct: 670 LTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLEL 729
Query: 395 FEEMLDRGIVPST 407
+E +++ +V T
Sbjct: 730 CDEAIEKCLVKKT 742
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 81/162 (50%), Gaps = 1/162 (0%)
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC-SYGPPHAAMMMYKKARKVGCKL 440
L+++ + +A ++F+++L+ G++ S + FL L S+ A ++++ +VG
Sbjct: 191 LVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEVGVCW 250
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+ +Y ++L L GK L +M+ G D Y ++ G C + QL + +M
Sbjct: 251 NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLM 310
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
EE RKG P++ Y+ + + L + ++ A + R +K R
Sbjct: 311 EELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR 352
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 191/401 (47%), Gaps = 16/401 (3%)
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
+ FF+WA + DV SYN ++ L + V D+ G +P+L T I++
Sbjct: 11 IQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIR 70
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLF 265
+AGQ +A++ L L++F + D N ++ L + + A LF +M+ +V
Sbjct: 71 GNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNP 130
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEG--FSPDSLTFSFLIE-GLGRAGRIDDAI 322
++ TYN VISG K G + + +L+E++ G +PD +T++ LI G+ + G +++A+
Sbjct: 131 DIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEAL 190
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
E+ D MK G PD YN++I G E + K MS C P++ T+ L+ G
Sbjct: 191 EILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS---CSPDLVTFNTLLDGF 247
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K+ + ALEV EEM I+P T T + LC G A + ++ + G +
Sbjct: 248 CKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDV 307
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE---------IYEYVIAGLCNIGQL 493
AY L+ L G+ L EM ++ Y V+ GL G +
Sbjct: 308 IAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSI 367
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
AV ++ + + +G+ P + Y+ L + L +N++ A +L
Sbjct: 368 SKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDL 408
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 153/326 (46%), Gaps = 14/326 (4%)
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
E G K D S N +L L + H ++ + N++T+ I+I G K GQ
Sbjct: 19 EQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
L+ + +PD F+FLI GL + G D A+++F+ M+ PD YN V
Sbjct: 79 TRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTV 138
Query: 344 ISNYISVGDFDECMKYYKGM--SSYNCEPNMDTYTRLI-SGLLKSRKVADALEVFEEMLD 400
IS G+ ++ + + M P++ TY LI +G+ K V +ALE+ + M
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKL 198
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G P T S + LC G A + K + C L + LL GF K GM
Sbjct: 199 AGPAPDVITYNSIIHALCVAGRVVEAAEILKT---MSCSPDLVTFNTLL---DGFCKAGM 252
Query: 461 L---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L L++ EM D Y ++ GLC +GQ++ A ++EE +R+G+ P + Y+
Sbjct: 253 LPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTS 312
Query: 518 LSNKLLASNKLESAYNLFRKIKIARQ 543
L + L S ++E A+ L +++ AR+
Sbjct: 313 LVDGLCKSGEIEEAHKLVKEMS-ARE 337
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 195/414 (47%), Gaps = 23/414 (5%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG--VNPDLETL 201
+A+ LF N ++ V D+ +YN ++ L + + +L +M + G PD+ T
Sbjct: 115 QAVKLFEN--MESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTY 172
Query: 202 SIVMDSFI-RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
+ ++++ I + G V +A+++L ++ G D + N ++ LC V A+ + +M
Sbjct: 173 NTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS 232
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
+++T+N ++ G+ K G + VL+E+ E PD +T++ L+ GL R G++
Sbjct: 233 CSP--DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQV 290
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS---------SYNCEPN 371
A + + + +G PD AY +++ G+ +E K K MS S N P
Sbjct: 291 AFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPP 350
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+ TY ++ GL+K ++ A+ + +++ RG VP T + ++ LC A +
Sbjct: 351 LFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLAD 410
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH---EMQESGYPSDGEIYEYVIAGLC 488
+ +GC L + G + G + D W EM + + +Y +I GLC
Sbjct: 411 EMASLGC---FPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLC 467
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
++++A +V++ +G Y KL ++ ++ A ++ ++ +AR
Sbjct: 468 KSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEM-VAR 520
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 152/344 (44%), Gaps = 24/344 (6%)
Query: 99 EERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPN 158
EE L L +K G D + ++ +L V G+VV + +K +
Sbjct: 187 EEALE--ILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEI------------LKTMS 232
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D+ ++N ++ + VL +M +E + PD+ T +I+++ R GQV A
Sbjct: 233 CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAF 292
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM---------- 268
+L + G D + ++ LC+ + A L M + + M
Sbjct: 293 YLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLF 352
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TYNIV+ G K G + + ++ ++VA G+ PD +T++ LI+GL +A R+ +A ++ D M
Sbjct: 353 TYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEM 412
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
GC P+ +V+ VG D+ MS PN+ YT LI GL KS ++
Sbjct: 413 ASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRM 472
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
DA V + M +G+ + + G AM MY +
Sbjct: 473 DDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDE 516
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 153/344 (44%), Gaps = 15/344 (4%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ + + P A DV +YN I+ AL +L M+ +PDL T +
Sbjct: 188 EALEILDGMKLAGP--APDVITYNSIIHALCVAGRVVEAAEILKTMS---CSPDLVTFNT 242
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
++D F +AG + +A+++L + + D + +++ LC+ V A L + +
Sbjct: 243 LLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQG 302
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKE-----IVAEGFS----PDSLTFSFLIEGLG 313
+ +V+ Y ++ G K G++ E +++KE I+AE S P T++ ++ GL
Sbjct: 303 YIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLI 362
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+ G I A+ + + +G PD YN +I E M+S C PN
Sbjct: 363 KDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDV 422
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
T ++ GL + +V DA + EM + P+ TS ++ LC A ++
Sbjct: 423 TLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAM 482
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
R G L AY+ L+ + G+ + ++ EM G+ DG
Sbjct: 483 RGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDG 526
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 189/388 (48%), Gaps = 4/388 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ N+A +V +Y+ I+K+L + + VL +M G NPD+ + VM F R+
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYN 271
+ KA ++ + + G K D S ++++ L + + + + + M +G+ ++ Y+
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTP-SMQAYS 119
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
++ +K +V + E++ G PD L F LI GL +AG++ DA E F M +
Sbjct: 120 SLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKH 179
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
GC P+ YN ++ S G ++ + M S++C P++ TY L+ + K+R+V +
Sbjct: 180 GCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEG 239
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
++FE M G VP+ T ++ + LC G A+ ++ + GCK + Y L+
Sbjct: 240 CKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISG 299
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA-VLVMEESLRKGFCP 510
L K +L+ +M ++ P D Y +IAG C G ++ A L E S G P
Sbjct: 300 LCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQP 359
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ + ++ L + KL A L ++
Sbjct: 360 TIVTFNTLIDGFCKLGKLGRANELVAEM 387
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 179/379 (47%), Gaps = 2/379 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+++Y+ +V+AL + + D ++ +M + G +PD ++ +AG+V A +
Sbjct: 115 MQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFK 174
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLG 281
++ G + + NV+L LC + A++LF MK +V+TYN ++ K
Sbjct: 175 QMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKAR 234
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+V E ++ + + A G+ P+ +TFS LI GL R G ++ A+EVF +M E GC P+ Y
Sbjct: 235 RVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYT 294
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD- 400
+IS + + ++ M+ P+ Y LI+G K + +A +++ EM
Sbjct: 295 TLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGG 354
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ P+ T + ++ C G A + + G Y++L+ LS K
Sbjct: 355 AGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDE 414
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L+++ +M+E + D + GLC G ++ A V E + + G P+ + LS
Sbjct: 415 ALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSE 474
Query: 521 KLLASNKLESAYNLFRKIK 539
L+ ++E A L K
Sbjct: 475 SLIKLGRVEDAQKLMEPAK 493
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 121/279 (43%), Gaps = 35/279 (12%)
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ NV TY+ +I K + E +VL+E++A G +PD F+ +++G R+ ++ A
Sbjct: 6 IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAR 65
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
EV+ M E G PD +Y+ +I +G DE +K M P+M Y+ L+ L
Sbjct: 66 EVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRAL 125
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K+R+V A +F+EM+ G P + LC G A +K+ K GC+ ++
Sbjct: 126 AKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNV 185
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y +LL GLC+ GQLE A + E
Sbjct: 186 PVYNVLLH-----------------------------------GLCSSGQLEQANTLFAE 210
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
P + Y+ L + + + ++E LF ++ A
Sbjct: 211 MKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAA 249
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 121/254 (47%), Gaps = 2/254 (0%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
A++ +V +++ ++ L R + V M + G P+ T + ++ RA
Sbjct: 245 AMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAE 304
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN--VMTY 270
+V +A ++ ++ + DA + N ++ C+R + A L+ M G ++T+
Sbjct: 305 KVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTF 364
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
N +I G+ KLG++ ++ E+ +G + DS T+ LI GL RA ++D+A+EV+ M+E
Sbjct: 365 NTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMRE 424
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
K D + + + G+ D+ ++ PN +T+ L L+K +V D
Sbjct: 425 KKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVED 484
Query: 391 ALEVFEEMLDRGIV 404
A ++ E R I
Sbjct: 485 AQKLMEPAKARDIT 498
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 192/399 (48%), Gaps = 6/399 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
E ++ ++ +K P ++ +YNV++ L + F + V M + PD+ T I
Sbjct: 245 EKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGI 304
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++ R+G V A ++ + GL DA N ++ CQ V A ++S
Sbjct: 305 LIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAG 364
Query: 264 LFNVMTYNIVISGWSKLGQV---VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
L N+ TYNI+I G G V +E+ +L++ VA PD++TF LI GL + G +
Sbjct: 365 LRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVA--CIPDTVTFGTLIHGLCQNGFANK 422
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A +F+ + G D +Y+++I+ +VG + +K Y+ M C+PN Y LIS
Sbjct: 423 AFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALIS 482
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
G + + +DA+ ++ +M D G P+ T + ++ LC A + ++ + G
Sbjct: 483 GFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTP 542
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+T Y L+R L K L +W ++ G D ++ +I GLC+ G+++ A+ V
Sbjct: 543 DITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVF 602
Query: 501 EESLRKGFCPSRLV-YSKLSNKLLASNKLESAYNLFRKI 538
+ K CP LV Y+ L + L + ++ A L+ I
Sbjct: 603 SDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSI 641
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 185/383 (48%), Gaps = 4/383 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+A ++++YN+++++L R D + + + V PD T S +M + ++ A+
Sbjct: 154 IAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHAL 213
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
+L + ++ D N +L + +++ + N+ TYN+++ G
Sbjct: 214 DLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDG 273
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K G+ E+ V + +VA PD +T+ LI GL R+G +D A V+ + + G D
Sbjct: 274 LCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVID 333
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN+++ + G E K++ + + N+ TY +I GL S V +A+E+++
Sbjct: 334 AAMYNSLVKGFCQAGRVQEAWKFWDS-AGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWD 392
Query: 397 EM-LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
+ D +P T T + + LC G + A ++++AR G +L + +Y ++ L
Sbjct: 393 LLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNV 452
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
G+ + ++ +M + G + IY +I+G C + + +AV + + G P+ + Y
Sbjct: 453 GRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITY 512
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
+ L + L + K + A ++ R++
Sbjct: 513 NTLIDGLCKAEKYQEASSVAREM 535
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 207/446 (46%), Gaps = 40/446 (8%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
V+ + RG+L A+ LF +++ VA D +Y+ ++ L ++ D ++L +M
Sbjct: 164 VLRSLCARGDLD-RAVTLFD--SLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMP 220
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL-EDFGLKFDAESLNVVLWCLCQRLHV 249
+ V PD+ + ++ +AG+ K +++ +L +D G + + + NV+L LC+
Sbjct: 221 RSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRF 280
Query: 250 GAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
++ M L +V+TY I+I G + G V RV EI+ G D+ ++ L
Sbjct: 281 KEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSL 340
Query: 309 IEGLGRAGRI----------------------------------DDAIEVFDTM-KEKGC 333
++G +AGR+ D+AIE++D + K+ C
Sbjct: 341 VKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVAC 400
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
PDT + +I G ++ ++ + ++ +Y+ +I+GL ++ DA++
Sbjct: 401 IPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVK 460
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
V+E+M G P++ + + C A+ +Y K GC ++ Y L+ L
Sbjct: 461 VYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLC 520
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
K + EM E+G+ D Y +I GL + ++++A+ + ++ L KG +
Sbjct: 521 KAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVM 580
Query: 514 VYSKLSNKLLASNKLESAYNLFRKIK 539
+++ L + L ++ K++ A ++F +K
Sbjct: 581 MHNILIHGLCSAGKVDEALHVFSDMK 606
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 166/353 (47%), Gaps = 8/353 (2%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED--FGLKF--DAESLNVVLWCLCQRLH 248
G NP + + + ++D+F+RA + A L FG + + ++ N+VL LC R
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ A +LF+S++ + V + +TY+ ++ G +K ++ +L E+ PD + ++
Sbjct: 174 LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNA 233
Query: 308 LIEGLGRAGRIDDAIEVFDTM-KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
L+ G +AG + + V+D + K+ G P+ YN ++ G F E + ++ M +
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
N +P++ TY LI GL +S V A V+ E++ G+V S ++ C G A
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA 353
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES-GYPSDGEIYEYVIA 485
+ A G + +L Y ++++ L G ++LW +++ D + +I
Sbjct: 354 WKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIH 412
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GLC G A + EE+ G YS + N L +L A ++ K+
Sbjct: 413 GLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKM 465
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 142/309 (45%), Gaps = 4/309 (1%)
Query: 152 WAIKHPNVA--KDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
W + +VA D ++ ++ L + F + + + G D+ + S +++
Sbjct: 391 WDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLC 450
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVM 268
G++ A+++ +++ G K ++ N ++ CQ A +++ M V+
Sbjct: 451 NVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVI 510
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TYN +I G K + E V +E+V GF+PD T+ LI GL +IDDA+ ++ +
Sbjct: 511 TYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQI 570
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY-NCEPNMDTYTRLISGLLKSRK 387
KG D +N +I S G DE + + M NC PN+ TY L+ GL ++
Sbjct: 571 LYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGY 630
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ A ++ + + G+ P + + ++ LCS H + + + G ++ + +
Sbjct: 631 IDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNI 690
Query: 448 LLRRLSGFG 456
L+R + +G
Sbjct: 691 LVRAVIKYG 699
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 150/349 (42%), Gaps = 13/349 (3%)
Query: 203 IVMDSFIRAGQVYKAIQMLGRLED-FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+V+ +F RA A+ L G S N +L + A + F S+
Sbjct: 88 VVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSH 147
Query: 262 -----KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
++ N+ TYNIV+ G + + + +PD +T+S L+ GL +
Sbjct: 148 GAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQD 207
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY-KGMSSYNCEPNMDTY 375
R+D A+++ D M PD YNA++ G+F++ M+ + K + PN+ TY
Sbjct: 208 RLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
++ GL K + + EV+E M+ + P T + LC G A +Y + K
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS--DGEIYEYVIAGLCNIGQL 493
G + Y L++ GF + G + + W +G+ + Y +I GL + G +
Sbjct: 328 TGLVIDAAMYNSLVK---GFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMV 384
Query: 494 ENAVLVMEESLRKGFC-PSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
+ A+ + + + C P + + L + L + A+ +F + +++
Sbjct: 385 DEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVS 433
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 183/383 (47%), Gaps = 28/383 (7%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+ HPNV +Y +++ + + ++ M + +LE+ +I + IR G
Sbjct: 285 GLPHPNVI----TYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNG 340
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYN 271
++ +A +L + G++ D S N+V+ LC+ + A L M + +L + +TY+
Sbjct: 341 KLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYS 400
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
++ G+ G+V E +L E+++ SP++ T + L+ L + GRI +A + M EK
Sbjct: 401 TLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEK 460
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGM-----------------------SSYNC 368
G G DT N +I+ + G D+ ++ GM S C
Sbjct: 461 GYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKC 520
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P++ TY+ +ISGL K+ ++ DA + F EM+ +G+ P + +F+ C G +A
Sbjct: 521 TPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQ 580
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ K K GC +L Y L+ L + L L EM+E G D Y +++ LC
Sbjct: 581 VLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLC 640
Query: 489 NIGQLENAVLVMEESLRKGFCPS 511
G++ +A V++E L+KG P+
Sbjct: 641 EGGRINDAPSVLDEMLQKGISPN 663
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 176/407 (43%), Gaps = 31/407 (7%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D+ SYN+++ L + ++ M + G+ PD T S ++ + G+V++A
Sbjct: 357 IEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEAN 416
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
+L + + + NV+L L + + A +L M K + +T NI+I+
Sbjct: 417 NLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINAL 476
Query: 278 SKLGQVVEMERVLKEIVAEG-----------------------FSPDSLTFSFLIEGLGR 314
GQ+ + ++ + G +PD +T+S +I GL +
Sbjct: 477 CNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCK 536
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
AGR+DDA + F M KG PD+ Y+ I ++ G + K M C + T
Sbjct: 537 AGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQT 596
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y LI GL ++ + + +EM ++G+ P T L LC G + A + +
Sbjct: 597 YNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEML 656
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE---IYEYVIAGLCNIG 491
+ G +++++++L++ F K HE+ E G +Y + L G
Sbjct: 657 QKGISPNISSFRILIK---AFCK-ACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGG 712
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++ A + E +L + F +Y L ++L KLE+A ++ ++
Sbjct: 713 KVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRL 759
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 196/452 (43%), Gaps = 43/452 (9%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
+ L+++ G G IE +++ N+ V+ + G LS M++ + + D
Sbjct: 347 IVLKEMLGIG-IEPDIYSYNI-----VMDGLCKNGMLSDARMLMGL---MIRNGILPDTV 397
Query: 165 SYNVIVKA-LGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+Y+ ++ + K F+ N+L +M +P+ T ++++ S + G++ +A +L +
Sbjct: 398 TYSTLLHGYCSKGKVFE-ANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQK 456
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------------------------ 259
+ + G D + N+++ LC + A + N M
Sbjct: 457 MNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTIS 516
Query: 260 KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
K +++TY+ +ISG K G++ + ++ E++++G PDS + I R G+I
Sbjct: 517 GKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKIS 576
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
A +V M+++GC YN++I S E M P++ TY ++
Sbjct: 577 SAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHML 636
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
+ L + ++ DA V +EML +GI P+ + ++ C A+ +++ A V C
Sbjct: 637 NCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNV-CG 695
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
Y L+ L GK +L+ + + +Y+ +I LC +LE A V
Sbjct: 696 HKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDV 755
Query: 500 MEESLRKG-------FCPSRLVYSKLSNKLLA 524
+ + KG F P + K+ NK +A
Sbjct: 756 LHRLIDKGYQFDPASFMPVIDGFGKMGNKHVA 787
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 173/383 (45%), Gaps = 25/383 (6%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL- 224
YN ++ + + ++ M ++G+ P +ET + + + +G++ +A ++ +
Sbjct: 220 YNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQ 279
Query: 225 --EDFGLKF-DAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
E+ GL + + ++L C+ + A +L ++MK F N+ +YNI + G +
Sbjct: 280 IDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRN 339
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+++E VLKE++ G PD +++ +++GL + G + DA + M G PDT Y
Sbjct: 340 GKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTY 399
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ ++ Y S G E M S NC PN T L+ L K ++++A + ++M +
Sbjct: 400 STLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNE 459
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMM----MYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+G T T + LC+ G A+ M+ L + L+ +SG
Sbjct: 460 KGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISG-K 518
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
KC D Y +I+GLC G+L++A E + KG P +Y
Sbjct: 519 KC---------------TPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYD 563
Query: 517 KLSNKLLASNKLESAYNLFRKIK 539
+ K+ SA+ + + ++
Sbjct: 564 TFIHSFCREGKISSAFQVLKDME 586
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 137/314 (43%), Gaps = 45/314 (14%)
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
+ YN+++ + +V + + K++V SP++ TF+ LI L +G ++DA E+FD
Sbjct: 112 IYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELFD 171
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M +GC P+ + ++ Y G + ++ M + PN Y LIS K
Sbjct: 172 KMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEG 231
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP-------------------PHAAM 427
K DA ++ ++M + G+VP T S + LC G PH +
Sbjct: 232 KTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNV 291
Query: 428 MMYKKARKVGCK--------------------LSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
+ YK CK ++L +Y + L G + G LL+ W
Sbjct: 292 ITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLL---GLIRNGKLLEAWIV 348
Query: 468 MQES-GYPSDGEIYEY--VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
++E G + +IY Y V+ GLC G L +A ++M +R G P + YS L + +
Sbjct: 349 LKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCS 408
Query: 525 SNKLESAYNLFRKI 538
K+ A NL ++
Sbjct: 409 KGKVFEANNLLHEM 422
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 164/400 (41%), Gaps = 48/400 (12%)
Query: 149 FFNWAIKH--------PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
FFN AI H P + YNV++K+ R + + + DM V+P+ T
Sbjct: 90 FFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYT 149
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
++++ +G + A ++ ++ G + + + +++ C+ L M+
Sbjct: 150 FNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMR 209
Query: 261 G-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
+L N + YN +IS + K G+ + E+++ ++ +G P TF+ I L +G+I
Sbjct: 210 TMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKIL 269
Query: 320 DAIEVFDTMK---EKGCG-PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
+A +F M+ E G P+ Y ++ + G +E M N+++Y
Sbjct: 270 EASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESY 329
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
+ GL+++ K+ +A V +EML GI P + ++ LC G A M+ +
Sbjct: 330 NIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIR 389
Query: 436 VGCKLSLTAYKLLLRRLSGFGK----------------------CGMLL-DLWHE----- 467
G Y LL GK C +LL LW E
Sbjct: 390 NGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISE 449
Query: 468 -------MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
M E GY D +I LCN GQL+ A+ ++
Sbjct: 450 AENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIV 489
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 158/382 (41%), Gaps = 30/382 (7%)
Query: 62 LFQISSHNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGV--FLQKLKGKG----- 114
L ++ S+N PN Y + + L E R+ LQK+ KG
Sbjct: 419 LHEMISNNCSPNTY------------TCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDT 466
Query: 115 ----VIEDALWNV-NVDLSLDVVGKVVNRGNLS----GEAMVLFFNWAIKHPNVAKDVKS 165
+I +AL N +D ++++V + G+ + G + + + I D+ +
Sbjct: 467 VTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVT 526
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y+ I+ L + D +M +G+ PD + SF R G++ A Q+L +E
Sbjct: 527 YSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDME 586
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
G ++ N ++ L + + L + M+ K V +V TYN +++ + G++
Sbjct: 587 KRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRIN 646
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ VL E++ +G SP+ +F LI+ +A + EVF+ + CG Y +
Sbjct: 647 DAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFE-IALNVCGHKEALYTLMF 705
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ + G E + ++ + + Y LI L K K+ A +V ++D+G
Sbjct: 706 NELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQ 765
Query: 405 PSTGTITSFLEPLCSYGPPHAA 426
+ ++ G H A
Sbjct: 766 FDPASFMPVIDGFGKMGNKHVA 787
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 89/211 (42%), Gaps = 4/211 (1%)
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
P ++ L++ R R++ ++ M P+ +N +I G ++ +
Sbjct: 109 QPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARE 168
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
+ M + CEPN T+ L+ G ++ + LE+ +M GI+P+ + + C
Sbjct: 169 LFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFC 228
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ---ESGYPS 475
G H A + K R+ G + + + L G GK ++ +MQ E G P
Sbjct: 229 KEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPH 288
Query: 476 DGEI-YEYVIAGLCNIGQLENAVLVMEESLR 505
I Y+ ++ G C G LE A +++ R
Sbjct: 289 PNVITYKLMLMGFCKEGMLEEAKTLVDTMKR 319
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 87/195 (44%), Gaps = 2/195 (1%)
Query: 351 GDFDECMKYYKGMSSYNCE--PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTG 408
G F++ + ++K + S E P++ Y L+ ++ +V ++++M+ + P
Sbjct: 89 GFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAY 148
Query: 409 TITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM 468
T + LC G A ++ K GC+ + + +L+R G L+L +M
Sbjct: 149 TFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQM 208
Query: 469 QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
+ G + +Y +I+ C G+ +A ++++ G P ++ + L S K+
Sbjct: 209 RTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKI 268
Query: 529 ESAYNLFRKIKIARQ 543
A +FR ++I +
Sbjct: 269 LEASRIFRDMQIDEE 283
>gi|125569053|gb|EAZ10568.1| hypothetical protein OsJ_00400 [Oryza sativa Japonica Group]
Length = 514
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 188/407 (46%), Gaps = 5/407 (1%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L+ G + + L ++ DVV KV+ + + + + FF WA P ++
Sbjct: 69 ILKSRDGDSELAEVLNQFADEMDEDVVLKVLQKQRSNWKVALSFFKWAAGLPQYNHGSRA 128
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET--LSIVMDSFIRAGQVYKAIQMLGR 223
Y ++ LGR K M + ++ E + +++++ + A +V +AI M +
Sbjct: 129 YTEMLDILGRMKKVRLMRQLFDEIPVESRQSVVTNRMFAVLLNRYAGAHKVQEAIDMFYK 188
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQV 283
+D+G + D ++L LC+ HV A +LF K + + ++NI+++GW G +
Sbjct: 189 RKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSL 248
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ +RV EI+A PD T+ I L ++G++ A+++F +M EKG PD N +
Sbjct: 249 ADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCI 308
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I E ++ + M+ C+ ++ TY LI K ++ E+ ++M +G+
Sbjct: 309 IDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGV 368
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T + L+ + P + + ++ K GC+L Y L+L + +
Sbjct: 369 SPNNMTYSYILK---TTEKPKDVISLMQRMEKSGCRLDSDTYNLILNLYVSWDYEKGVQL 425
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
+W EM+ +G D + ++ GL + +L+ A+ +G P
Sbjct: 426 VWDEMERNGSGPDQRSFTIMVHGLHSHDKLDEALHYYRTMESRGMTP 472
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 3/241 (1%)
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMK-EKGCGPDTNAYNAVISN-YISVGDFDECMKY 359
S ++ +++ LGR ++ ++FD + E TN AV+ N Y E +
Sbjct: 126 SRAYTEMLDILGRMKKVRLMRQLFDEIPVESRQSVVTNRMFAVLLNRYAGAHKVQEAIDM 185
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ Y E ++ + L+ L + + V +A +F + D P + L C
Sbjct: 186 FYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKDE-FPPVIKSWNIILNGWCV 244
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
G A ++ + K L Y + L+ GK + L+ M E G D I
Sbjct: 245 KGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAI 304
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I LC ++ A+ + E +G Y+ L N++E Y L ++
Sbjct: 305 CNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDME 364
Query: 540 I 540
+
Sbjct: 365 V 365
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 192/401 (47%), Gaps = 3/401 (0%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
N + EA+ L K D+ +Y V+V L +R D +L+ M + + P +
Sbjct: 200 NKASEAVALIDRMVAK--GCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVL 257
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
+ ++D + + A+ + +E G++ + + + ++ CLC AS L + M
Sbjct: 258 IYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 260 -KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+ K+ +V T++ +I + K G++VE E++ E+V P +T+S LI G R+
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
D+A ++F+ M K C PD +Y+ +I + DE M+ ++ MS N TYT L
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I GL ++ A E+F+EM+ G+ P+ T + L+ LC G AM++++ ++
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ ++ Y +++ + GK DL+ + G D Y +I+G C G E A
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ +E G P+ Y+ L L E++ L ++++
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 177/381 (46%), Gaps = 40/381 (10%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PN ++N ++ L ++ M +G PDL T +V++ + G
Sbjct: 183 QPNTV----TFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
A +L ++E L+ ++ LC+ H+ A +LF M+ K + NV+TY+ +I
Sbjct: 239 LAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
S G+ + R+L +++ +PD TFS LI+ + G++ +A +++D M ++
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P Y+++I+ + DE + ++ M S +C P++ +Y+ LI G K+++V + +E+
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMEL 418
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F EM RG+V +T T Y L++ L
Sbjct: 419 FREMSQRGLVGNTVT-----------------------------------YTTLIQGLFQ 443
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G C M +++ EM G P + Y ++ GLC G+LE A++V E R P+
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 515 YSKLSNKLLASNKLESAYNLF 535
Y+ + + + K+E ++LF
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLF 524
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 162/355 (45%), Gaps = 1/355 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ +M K P + S ++ + + + I + ++++ G+ + + ++++ C C
Sbjct: 68 LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFC 127
Query: 245 QRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+R + A ++ M K N++T + +++G+ ++ E ++ ++ G+ P+++
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
TF+ LI GL + +A+ + D M KGC PD Y V++ GD D M
Sbjct: 188 TFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKM 247
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
EP + YT +I GL K++ + DAL +F+EM +GI P+ T +S + LC+YG
Sbjct: 248 EQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A + + + + L+ GK L+ EM + Y +
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
I G C +L+ A + E + K P + YS L + +++ LFR++
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREM 422
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 169/360 (46%), Gaps = 8/360 (2%)
Query: 144 EAMVLFFNWAIK--HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
+A+ LF K PNV +Y+ ++ L + +LSDM + +NPD+ T
Sbjct: 274 DALNLFKEMETKGIRPNVV----TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 329
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
S ++D+F++ G++ +A ++ + + + + ++ C + A +F M
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Query: 262 KVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
K F +V++Y+ +I G+ K +V E + +E+ G +++T++ LI+GL +AG D
Sbjct: 390 KHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDM 449
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A E+F M G P+ YN ++ G ++ M ++ + EP + TY +I
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
G+ K+ KV D ++F + +G+ P + + C G A ++K+ ++ G
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+ Y L+R G +L EM+ G+ D ++ + + G+L+ + L M
Sbjct: 570 NSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSFLDM 628
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 102/234 (43%), Gaps = 4/234 (1%)
Query: 310 EGLGRAG----RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
E L R G ++DDA+ +F M + P ++ ++S + FD + + M +
Sbjct: 50 EKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN 109
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
N TY+ LI+ + ++ AL V +M+ G P+ T++S L C
Sbjct: 110 LGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 169
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ + + G + + + L+ L K + L M G D Y V+
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVN 229
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
GLC G + A +++ + + P L+Y+ + + L + ++ A NLF++++
Sbjct: 230 GLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEME 283
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 76/181 (41%), Gaps = 6/181 (3%)
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+ + G +SY D +L L K+ DA+ +F EM+ PS + L +
Sbjct: 38 RAFSGKTSY------DYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAI 91
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
+ + ++ + +G + Y +L+ + + L + +M + GY +
Sbjct: 92 AKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNI 151
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
++ G C+ ++ AV ++++ G+ P+ + ++ L + L NK A L +
Sbjct: 152 VTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDR 211
Query: 538 I 538
+
Sbjct: 212 M 212
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 182/379 (48%), Gaps = 1/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y +V L +R D ++L M K + ++ + ++D + + A +
Sbjct: 220 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLF 279
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
++E G+K D + N ++ CLC AS L + M + K+ NV+T+N +I ++K
Sbjct: 280 NKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKE 339
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+++E E++ E++ P+ +T++ LI G R+D+A ++F M K C PD Y
Sbjct: 340 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 399
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I + +E M+ ++ MS N TY LI GL ++ A ++F++M+
Sbjct: 400 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 459
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ P T + L+ LC YG A+++++ +K + ++ Y +++ + GK
Sbjct: 460 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVED 519
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
DL+ + G + IY +I+G C G E A + E G P Y+ L
Sbjct: 520 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIR 579
Query: 521 KLLASNKLESAYNLFRKIK 539
L ++ L ++++
Sbjct: 580 ARLRDGDKAASAELIKEMR 598
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 176/375 (46%), Gaps = 36/375 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D ++N ++ L ++ M G PDL T V++ + G + A+ +L
Sbjct: 185 DTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 244
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++E ++ + N ++ LC+ H+ A LFN M+ K + +V TYN +IS
Sbjct: 245 KKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNY 304
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ + R+L +++ +P+ +TF+ LI+ + G++ +A ++FD M ++ P+ Y
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 364
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N++I+ + DE + + M S +C P++ TY LI G K+++V + +E+F EM
Sbjct: 365 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQ 424
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
RG+V +T T Y L++ L G C M
Sbjct: 425 RGLVGNTVT-----------------------------------YNTLIQGLFQAGDCDM 449
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
++ +M G P D Y ++ GLC G+LE A++V E + P+ Y+ +
Sbjct: 450 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIE 509
Query: 521 KLLASNKLESAYNLF 535
+ + K+E ++LF
Sbjct: 510 GMCKAGKVEDGWDLF 524
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 197/446 (44%), Gaps = 71/446 (15%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y++++ RR VL M K G PD+ TLS +++ + ++ +A+ ++ ++
Sbjct: 118 TYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 177
Query: 225 EDFGLKFDAESLNVVLW----------------------C-------------LCQRLHV 249
+ G K D + N ++ C LC+R +
Sbjct: 178 VEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 237
Query: 250 GAASSLFNSM-KGKVLFNVMTYNIVISGWSK----------------------------- 279
A SL M KGK+ NV+ YN +I G K
Sbjct: 238 DLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSL 297
Query: 280 ------LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
G+ + R+L +++ +P+ +TF+ LI+ + G++ +A ++FD M ++
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 357
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
P+ YN++I+ + DE + + M S +C P++ TY LI G K+++V + +E
Sbjct: 358 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGME 417
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+F EM RG+V +T T + ++ L G A ++KK G + Y +LL L
Sbjct: 418 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 477
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
+GK L ++ +Q+S + Y +I G+C G++E+ + KG P+ +
Sbjct: 478 KYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 537
Query: 514 VYSKLSNKLLASNKLESAYNLFRKIK 539
+Y+ + + E A LFR++K
Sbjct: 538 IYTTMISGFCRKGLKEEADALFREMK 563
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 188/397 (47%), Gaps = 24/397 (6%)
Query: 124 NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAI------KHPN-------------VAKDVK 164
++DL+L ++ K+ +G + EA V+ +N I KH + + DV
Sbjct: 236 DIDLALSLLKKM-EKGKI--EANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 292
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ L + +LSDM + +NP++ T + ++D+F + G++ +A ++ +
Sbjct: 293 TYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 352
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
+ + + N ++ C + A +F M K L +V+TYN +I G+ K +V
Sbjct: 353 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRV 412
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E + +E+ G +++T++ LI+GL +AG D A ++F M G PD Y+ +
Sbjct: 413 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 472
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ G ++ + ++ + EPN+ TY +I G+ K+ KV D ++F + +G+
Sbjct: 473 LDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T+ + C G A ++++ ++ G Y L+R G +
Sbjct: 533 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAE 592
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
L EM+ G+ D VI L + G+LE + L M
Sbjct: 593 LIKEMRSCGFVGDASTISMVINMLHD-GRLEKSYLEM 628
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 122/270 (45%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N TY+I+++ + + Q+ VL +++ G+ PD +T S L+ G RI +A+ +
Sbjct: 115 NHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 174
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M E G PDT +N +I E + M + C+P++ TY +++GL K
Sbjct: 175 DQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 234
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+ AL + ++M I + + ++ LC Y A ++ K G K + Y
Sbjct: 235 GDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 294
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ L +G+ L +M E + + +I G+L A + +E ++
Sbjct: 295 NSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 354
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ P+ + Y+ L N ++L+ A +F
Sbjct: 355 RSIDPNIVTYNSLINGFCMHDRLDEAQQIF 384
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 103/234 (44%), Gaps = 4/234 (1%)
Query: 310 EGLGRAG----RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
E L R G ++DDA+ +F M + P ++ ++S + FD + + M +
Sbjct: 50 EKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN 109
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
N TY+ L++ + ++ AL V +M+ G P T++S L C
Sbjct: 110 LGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISE 169
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ + + ++G K + L+ L K + L M G D Y V+
Sbjct: 170 AVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 229
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
GLC G ++ A+ ++++ + + ++Y+ + + L ++ A++LF K++
Sbjct: 230 GLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKME 283
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 79/185 (42%), Gaps = 7/185 (3%)
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+ + G +SY D +L L K+ DA+ +F EM+ PS + L +
Sbjct: 38 RAFSGKTSY------DYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAI 91
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
+ + ++ + +G + Y +LL + + L + +M + GY D
Sbjct: 92 AKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDI 151
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
++ G C+ ++ AV ++++ + G+ P + ++ L + L NK A L +
Sbjct: 152 VTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDR 211
Query: 538 IKIAR 542
+ +AR
Sbjct: 212 M-VAR 215
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 174/352 (49%), Gaps = 1/352 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M G P++ + SI++ R G+ + I++L ++ G + D N ++ LC+
Sbjct: 187 MVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRL 246
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
V A +F MKG +L V+TY +I G LG+ E +L E+ PD + FS
Sbjct: 247 VNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSV 306
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI+ + + G + +A + TM E G PD YN +++ Y + E K ++ M S
Sbjct: 307 LIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKG 366
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
P++ +++ L++G K++++ +A ++F+EM RG++P T + + + LC P A
Sbjct: 367 RMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAE 426
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++K G +L Y +LL LS G + L+ M+ SG D Y +I G+
Sbjct: 427 ELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGM 486
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
C G+ ++A + E KG P+ V + + + L+ A+ FR+++
Sbjct: 487 CKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQME 538
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 153/303 (50%), Gaps = 5/303 (1%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
+ L EA+ +F +K + V +Y ++ L + +L++M + PD
Sbjct: 243 KDRLVNEAVHIF--CKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPD 300
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
L S+++D + G+V +A +L + + G++ D + N ++ C R+ V A +F
Sbjct: 301 LVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFE 360
Query: 258 SM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
M KG+ + +V +++I+++G+ K ++ E +++ E+ G PD+++++ LI GL +A
Sbjct: 361 VMISKGR-MPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQA 419
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
R +A E+F M G P+ Y+ ++ G D+ M ++ M + +P++ TY
Sbjct: 420 RRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTY 479
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
+I G+ K K DA E+F E+ +G+ P+ T ++ +C G A +++ K
Sbjct: 480 NIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEK 539
Query: 436 VGC 438
C
Sbjct: 540 DDC 542
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 145/340 (42%), Gaps = 34/340 (10%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P + + + +R + + ++E G+ D SL +++ C C+ HV
Sbjct: 89 PSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDY---- 144
Query: 256 FNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
G+S LG+++++ G P+ +TFS LI G
Sbjct: 145 --------------------GFSVLGKIIKL----------GLEPNVITFSTLINGFCIE 174
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
G+I AIE+FD M +G P+ ++Y+ +I VG E +K + M CEP++ Y
Sbjct: 175 GKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIY 234
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
++ L K R V +A+ +F +M GI+P+ T TS + L + G A + + +
Sbjct: 235 NTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKG 294
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
L A+ +L+ + G+ + M E G D Y ++ G C ++
Sbjct: 295 GNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVE 354
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
A V E + KG P +S L N + +++ A LF
Sbjct: 355 ARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLF 394
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 143/303 (47%), Gaps = 10/303 (3%)
Query: 109 KLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNV 168
K+KG G++ + ++ L +G+ L E +K N+ D+ +++V
Sbjct: 256 KMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNE---------MKGGNIMPDLVAFSV 306
Query: 169 IVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
++ + + +L M + GV PD+ T + +M+ + +V +A ++ + G
Sbjct: 307 LIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKG 366
Query: 229 LKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEME 287
D S ++++ C+ + A LF+ M + L + ++YN +ISG + + +E E
Sbjct: 367 RMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAE 426
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
+ K++ + G+ P+ +T+S L++ L + G +D A+ +F M+ G PD YN +I
Sbjct: 427 ELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGM 486
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
G F + + + +S +PN T I G+ K + +A + F +M P+
Sbjct: 487 CKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQ 546
Query: 408 GTI 410
G I
Sbjct: 547 GCI 549
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 91/182 (50%), Gaps = 1/182 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV S++++V + K D + +M G+ PD + + ++ +A + +A ++
Sbjct: 370 DVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELF 429
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
+ G + + +++L CL ++ ++ A LF +M+ L +++TYNI+I G K
Sbjct: 430 KDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKY 489
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ + + E+ +G P++ + I+G+ + G +D+A + F M++ C P
Sbjct: 490 GKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCI 549
Query: 341 NA 342
N
Sbjct: 550 NG 551
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 83/188 (44%)
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
+ ++ + + M + N P++ + L S L++ + + + ++M GI ++T
Sbjct: 71 NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
+ C + K K+G + ++ + L+ GK G ++L+ M
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
GY + Y +I GLC +G+ + ++E G P ++Y+ + ++L + A
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEA 250
Query: 532 YNLFRKIK 539
++F K+K
Sbjct: 251 VHIFCKMK 258
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 101/256 (39%), Gaps = 35/256 (13%)
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS------------ 365
I+DA+ F+ M P + + S + + + + K M
Sbjct: 72 INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131
Query: 366 -YNC----------------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
NC EPN+ T++ LI+G K+ A+E+F+ M+ RG
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P+ + + ++ LC G + + + + VGC+ + Y ++ RL +
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
++ +M+ +G Y +I GL N+G+ + A ++ E P + +S L + +
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311
Query: 523 LASNKLESAYNLFRKI 538
++ A + + +
Sbjct: 312 CKEGEVSEARVILKTM 327
>gi|356560394|ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 612
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 187/405 (46%), Gaps = 11/405 (2%)
Query: 112 GKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVK 171
G I+ L + ++ LS ++V +V++R EA FF WA K P A V+ Y+ ++
Sbjct: 141 GPSQIKQKLEHCSIVLSPELVVEVLSRTRNDWEAAFTFFLWAGKQPGYAHSVREYHSMIS 200
Query: 172 ALGRRKFFDFMCNVLSDM--AKEG---VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
LG+ + FD N++ +M + G V P +TL I++ + V +AI +
Sbjct: 201 ILGKMRKFDTAWNLIEEMRGGRNGLSLVTP--QTLLIMIRKYCAVHDVARAINTFYAYKR 258
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKL-GQVVE 285
F + E + +L LC+ +V A L K + ++NI+++GW L
Sbjct: 259 FNFRVGLEEFHSLLSALCRYKNVQDAEYLLFCNKDVFPLDTKSFNIILNGWCNLIVSTSH 318
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
ER+ E++ D +++ +I ++ ++ + +FD MK++ PD YNAVI
Sbjct: 319 AERIWHEMIKRRIQHDVVSYGSIISCYSKSSKLYKVLRMFDEMKKRKITPDRKVYNAVIY 378
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
E + M + P++ TY LI L K+ KV +A ++F+EML R + P
Sbjct: 379 ALAKGRLVKEAVNLIGTMEGNDVTPDVVTYNSLIKPLCKAHKVDEAKQLFDEMLKRHLSP 438
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
+ T +F L + + K +++ C ++ Y +L+R+ + + + +W
Sbjct: 439 TIQTFHAFFRILRT---KEEVFELLDKMKELRCYPTIETYIMLIRKFCRWCQLDDVFKIW 495
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
M+E D Y +I GL G+LE A E KGF P
Sbjct: 496 DAMREDEISHDRSSYIVLIHGLFLNGKLEEAQRYYAEMQEKGFLP 540
>gi|357450985|ref|XP_003595769.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484817|gb|AES66020.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 497
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/491 (25%), Positives = 218/491 (44%), Gaps = 42/491 (8%)
Query: 29 SVRSNLSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDS 88
+SNL + N + H+++++ + +S +FP+ + ++ NS R
Sbjct: 2 QTKSNLQQHASNKNTFMQKQQTNSHNLVQQSPN----TSEPTFPSSFPQNPRNSSSRFLH 57
Query: 89 SRAVDEFLLPEERLRGVFLQKL------KGKGVIEDALWNVNVDLSLDVVGKVVNRGNLS 142
S L F+Q L K IE AL + + + ++V +V+ R
Sbjct: 58 SHHDSPPL-------ASFIQNLLKFRRDKPTEQIEQALNLIGIHPNNNLVLQVLQRHRSD 110
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
+ +FF W K N + YN I+ LG+ K F+ + VL +M++ + ET
Sbjct: 111 WKPAFIFFKWVSKTNNYTPSCEVYNEIINILGKMKCFEELHQVLDEMSQRKEFINEETFC 170
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGL--KFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
I++ F+ A ++ +AI + R E+FGL + D+++ +L +C+ H+ A +LF+
Sbjct: 171 ILIRRFVAAHKLEEAINIFYRREEFGLDNELDSKAFRTLLMWMCRYKHIEEAETLFHRNL 230
Query: 261 GKVLF--NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
K F ++ T+N++++GW LG E +R+ K+I+A + I
Sbjct: 231 NKFRFCRDIKTWNVILNGWCVLGNTHEAKRLWKDIIA-----------------YKCKEI 273
Query: 319 DDAIEVFD-TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
+ EV ++E+ C PD +N +I E ++ + M +C PN+ TY
Sbjct: 274 GNCFEVVQWDVEEESCKPDVVIFNCLIDGLCFKKRIPEALQVFHDMKERDCLPNVATYNS 333
Query: 378 LISGLLKSRKVADALEVFEEMLDR-GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
LI L K R++ E+ E+M R G G S+L L S P + ++ +
Sbjct: 334 LIKHLFKIRRMEKVYELVEDMERRSGDCLPNGVTYSYL--LQSLKAPEEVPAVLERMERN 391
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
GC +S L+LR + L W EM+ +G D Y +I G G+ ++A
Sbjct: 392 GCAMSDDICNLILRLYMKWDDLDGLRKTWDEMERNGLGPDRRSYTIMIHGHYENGRTKDA 451
Query: 497 VLVMEESLRKG 507
+ +E KG
Sbjct: 452 MRYFQEMTSKG 462
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTY 270
G ++ +Q +E+ K D N ++ LC + + A +F+ MK + L NV TY
Sbjct: 274 GNCFEVVQW--DVEEESCKPDVVIFNCLIDGLCFKKRIPEALQVFHDMKERDCLPNVATY 331
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAE------GFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
N +I L ++ ME+V E+V + P+ +T+S+L++ L ++ V
Sbjct: 332 NSLIK---HLFKIRRMEKVY-ELVEDMERRSGDCLPNGVTYSYLLQSLKAP---EEVPAV 384
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
+ M+ GC + N ++ Y+ D D K + M P+ +YT +I G +
Sbjct: 385 LERMERNGCAMSDDICNLILRLYMKWDDLDGLRKTWDEMERNGLGPDRRSYTIMIHGHYE 444
Query: 385 SRKVADALEVFEEMLDRGIV 404
+ + DA+ F+EM +GIV
Sbjct: 445 NGRTKDAMRYFQEMTSKGIV 464
>gi|297719649|ref|NP_001172186.1| Os01g0151900 [Oryza sativa Japonica Group]
gi|9663979|dbj|BAB03620.1| hypothetical protein [Oryza sativa Japonica Group]
gi|13872936|dbj|BAB44041.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215768885|dbj|BAH01114.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255672883|dbj|BAH90916.1| Os01g0151900 [Oryza sativa Japonica Group]
Length = 534
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 188/407 (46%), Gaps = 5/407 (1%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L+ G + + L ++ DVV KV+ + + + + FF WA P ++
Sbjct: 89 ILKSRDGDSELAEVLNQFADEMDEDVVLKVLQKQRSNWKVALSFFKWAAGLPQYNHGSRA 148
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET--LSIVMDSFIRAGQVYKAIQMLGR 223
Y ++ LGR K M + ++ E + +++++ + A +V +AI M +
Sbjct: 149 YTEMLDILGRMKKVRLMRQLFDEIPVESRQSVVTNRMFAVLLNRYAGAHKVQEAIDMFYK 208
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQV 283
+D+G + D ++L LC+ HV A +LF K + + ++NI+++GW G +
Sbjct: 209 RKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSL 268
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ +RV EI+A PD T+ I L ++G++ A+++F +M EKG PD N +
Sbjct: 269 ADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCI 328
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I E ++ + M+ C+ ++ TY LI K ++ E+ ++M +G+
Sbjct: 329 IDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGV 388
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T + L+ + P + + ++ K GC+L Y L+L + +
Sbjct: 389 SPNNMTYSYILK---TTEKPKDVISLMQRMEKSGCRLDSDTYNLILNLYVSWDYEKGVQL 445
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
+W EM+ +G D + ++ GL + +L+ A+ +G P
Sbjct: 446 VWDEMERNGSGPDQRSFTIMVHGLHSHDKLDEALHYYRTMESRGMTP 492
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 3/241 (1%)
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMK-EKGCGPDTNAYNAVISN-YISVGDFDECMKY 359
S ++ +++ LGR ++ ++FD + E TN AV+ N Y E +
Sbjct: 146 SRAYTEMLDILGRMKKVRLMRQLFDEIPVESRQSVVTNRMFAVLLNRYAGAHKVQEAIDM 205
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ Y E ++ + L+ L + + V +A +F + D P + L C
Sbjct: 206 FYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKDE-FPPVIKSWNIILNGWCV 264
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
G A ++ + K L Y + L+ GK + L+ M E G D I
Sbjct: 265 KGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAI 324
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I LC ++ A+ + E +G Y+ L N++E Y L ++
Sbjct: 325 CNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDME 384
Query: 540 I 540
+
Sbjct: 385 V 385
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 193/417 (46%), Gaps = 6/417 (1%)
Query: 124 NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMC 183
NV + VV + G + GEA LF + V +V +YN ++ AL + + D
Sbjct: 210 NVVVYSTVVHGLFKEGKV-GEACDLFHE--MTQQGVPPNVVTYNSVIHALCKARAVDKAQ 266
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
+L M GV PD T + ++ + GQ +A++M + G+ + + + + L
Sbjct: 267 GILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFL 326
Query: 244 CQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
C+ + A F+SM KG L N+++Y+ ++ G++ G +V+M + +V +G P+
Sbjct: 327 CKHGRIEEAREFFDSMLAKGHKL-NIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPN 385
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
F+ L+ G + G + +A+ +F+ M+++G PD Y AVI + +G D+ M +
Sbjct: 386 QHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFN 445
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M EPN Y LI G + A E+ E+ ++G+ P + S + LC G
Sbjct: 446 HMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEG 505
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
A ++ + G K + + L+ GK + M G D Y
Sbjct: 506 RVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYG 565
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++ G C G++++ +++ E L KG P+ Y + + L + + +A +F+++
Sbjct: 566 TLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEM 622
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 112/540 (20%), Positives = 220/540 (40%), Gaps = 79/540 (14%)
Query: 58 ELSDLF-QISSHNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVI 116
E DLF +++ PNV + ++ + + +RAVD + +G+ L+++ G GV
Sbjct: 229 EACDLFHEMTQQGVPPNVV--TYNSVIHALCKARAVD-------KAQGI-LRQMVGNGVQ 278
Query: 117 EDAL--------------WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAK- 161
D + W V + ++ + V ++ V F KH + +
Sbjct: 279 PDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFL---CKHGRIEEA 335
Query: 162 --------------DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
++ SY+ ++ M N+ + M ++G+ P+ +I+++
Sbjct: 336 REFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNG 395
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFN 266
+ + G V +A+ + ++ GL D + V+ C+ + A FN M K V N
Sbjct: 396 YAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPN 455
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
Y +I G+ G +V+ E ++ EI +G P L+F+ LI L + GR+ +A +FD
Sbjct: 456 FAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFD 515
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
+ G D N + ++I Y +G E + + M S EP++ TY L++G K+
Sbjct: 516 MIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNG 575
Query: 387 KVADAL-----------------------------------EVFEEMLDRGIVPSTGTIT 411
++ D L E+F+EM++ GI + T +
Sbjct: 576 RIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYS 635
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
L LC A+ +++K + K + +++ ++ + L+ + +
Sbjct: 636 ILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDY 695
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G + Y ++ L G +E A V L+ G P+ + + LL ++ A
Sbjct: 696 GLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKA 755
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 159/350 (45%), Gaps = 10/350 (2%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG-AASS 254
P + T SI++D RA ++ A G L G+K D ++ +L LC A
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 255 LFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAE--GFSPDSLTFSFLIEG 311
LF+ M + + ++Y+ V+ G+ +L+ V + G + + +S ++ G
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
L + G++ +A ++F M ++G P+ YN+VI D+ + M +P+
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
TY LI G + A+ +F+EM RG++P+T T ++F+ LC +G A +
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFD 340
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLC 488
G KL++ +Y LL G+ G L+D L++ M G + ++ ++ G
Sbjct: 341 SMLAKGHKLNIISYSTLLH---GYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYA 397
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G + A+ + E+ ++G P L Y + + ++ A + F +
Sbjct: 398 KCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHM 447
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 124/292 (42%), Gaps = 8/292 (2%)
Query: 252 ASSLFNSMKGKV-----LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
A +LFN M L V TY+I+I + ++ ++ +G D + S
Sbjct: 83 AVALFNRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVS 142
Query: 307 FLIEGLGRAGRIDDAIEV-FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM-- 363
L+ GL A R D+A++V F M E GC PD +Y+ V+ + G + +
Sbjct: 143 SLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVK 202
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
C N+ Y+ ++ GL K KV +A ++F EM +G+ P+ T S + LC
Sbjct: 203 QGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAV 262
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A + ++ G + Y L+ S G+ + ++ EM G +
Sbjct: 263 DKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTF 322
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+A LC G++E A + L KG + + YS L + + L NLF
Sbjct: 323 VAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLF 374
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 192/399 (48%), Gaps = 6/399 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
E ++ ++ +K P ++ +YNV++ L + F + V M + PD+ T I
Sbjct: 245 EKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGI 304
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++ R+G V A ++ + GL DA N ++ CQ V A ++S
Sbjct: 305 LIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAG 364
Query: 264 LFNVMTYNIVISGWSKLGQV---VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
L N+ TYNI+I G G V +E+ +L++ VA PD++TF LI GL + G +
Sbjct: 365 LRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVA--CIPDTVTFGTLIHGLCQNGFANK 422
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A +F+ + G D +Y+++I+ +VG + +K Y+ M C+PN Y LIS
Sbjct: 423 AFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALIS 482
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
G + + +DA+ ++ +M D G P+ T + ++ LC A + ++ + G
Sbjct: 483 GFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTP 542
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+T Y L+R L K L +W ++ G D ++ +I GLC+ G+++ A+ V
Sbjct: 543 DITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVF 602
Query: 501 EESLRKGFCPSRLV-YSKLSNKLLASNKLESAYNLFRKI 538
+ K CP LV Y+ L + L + ++ A L+ I
Sbjct: 603 SDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSI 641
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 186/383 (48%), Gaps = 4/383 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+A ++++YN+++++L R D + + + V PD T S +M + ++ A+
Sbjct: 154 IAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHAL 213
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
+L + G++ D N +L + +++ + N+ TYN+++ G
Sbjct: 214 DLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDG 273
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K G+ E+ V + +VA PD +T+ LI GL R+G +D A V+ + + G D
Sbjct: 274 LCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVID 333
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN+++ + G E K++ + + N+ TY +I GL S V +A+E+++
Sbjct: 334 AAMYNSLVKGFCQAGRVQEAWKFWDS-AGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWD 392
Query: 397 EM-LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
+ D +P T T + + LC G + A ++++AR G +L + +Y ++ L
Sbjct: 393 LLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNV 452
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
G+ + ++ +M + G + IY +I+G C + + +AV + + G P+ + Y
Sbjct: 453 GRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITY 512
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
+ L + L + K + A ++ R++
Sbjct: 513 NTLIDGLCKAEKYQEASSVAREM 535
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 208/446 (46%), Gaps = 40/446 (8%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
V+ + RG+L A+ LF +++ VA D +Y+ ++ L ++ D ++L +M
Sbjct: 164 VLRSLCARGDLD-RAVTLFD--SLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMP 220
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL-EDFGLKFDAESLNVVLWCLCQRLHV 249
+ GV PD+ + ++ +AG+ K +++ +L +D G + + + NV+L LC+
Sbjct: 221 RSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRF 280
Query: 250 GAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
++ M L +V+TY I+I G + G V RV EI+ G D+ ++ L
Sbjct: 281 KEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSL 340
Query: 309 IEGLGRAGRI----------------------------------DDAIEVFDTM-KEKGC 333
++G +AGR+ D+AIE++D + K+ C
Sbjct: 341 VKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVAC 400
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
PDT + +I G ++ ++ + ++ +Y+ +I+GL ++ DA++
Sbjct: 401 IPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVK 460
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
V+E+M G P++ + + C A+ +Y K GC ++ Y L+ L
Sbjct: 461 VYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLC 520
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
K + EM E+G+ D Y +I GL + ++++A+ + ++ L KG +
Sbjct: 521 KAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVM 580
Query: 514 VYSKLSNKLLASNKLESAYNLFRKIK 539
+++ L + L ++ K++ A ++F +K
Sbjct: 581 MHNILIHGLCSAGKVDEALHVFSDMK 606
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 167/353 (47%), Gaps = 8/353 (2%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED--FGLKF--DAESLNVVLWCLCQRLH 248
G NP + + + ++D+F+RA + A L FG + + ++ N+VL LC R
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ A +LF+S++ + V + +TY+ ++ G +K ++ +L E+ G PD + ++
Sbjct: 174 LDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNA 233
Query: 308 LIEGLGRAGRIDDAIEVFDTM-KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
L+ G +AG + + V+D + K+ G P+ YN ++ G F E + ++ M +
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
N +P++ TY LI GL +S V A V+ E++ G+V S ++ C G A
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA 353
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES-GYPSDGEIYEYVIA 485
+ A G + +L Y ++++ L G ++LW +++ D + +I
Sbjct: 354 WKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIH 412
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GLC G A + EE+ G YS + N L +L A ++ K+
Sbjct: 413 GLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKM 465
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 142/309 (45%), Gaps = 4/309 (1%)
Query: 152 WAIKHPNVA--KDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
W + +VA D ++ ++ L + F + + + G D+ + S +++
Sbjct: 391 WDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLC 450
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVM 268
G++ A+++ +++ G K ++ N ++ CQ A +++ M V+
Sbjct: 451 NVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVI 510
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TYN +I G K + E V +E+V GF+PD T+ LI GL +IDDA+ ++ +
Sbjct: 511 TYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQI 570
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY-NCEPNMDTYTRLISGLLKSRK 387
KG D +N +I S G DE + + M NC PN+ TY L+ GL ++
Sbjct: 571 LYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGY 630
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ A ++ + + G+ P + + ++ LCS H + + + G ++ + +
Sbjct: 631 IDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNI 690
Query: 448 LLRRLSGFG 456
L+R + +G
Sbjct: 691 LVRAVIKYG 699
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 151/349 (43%), Gaps = 13/349 (3%)
Query: 203 IVMDSFIRAGQVYKAIQMLGRLED-FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+V+ +F RA A+ L G S N +L + A + F S+
Sbjct: 88 VVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSH 147
Query: 262 -----KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
++ N+ TYNIV+ G + + + +PD +T+S L+ GL +
Sbjct: 148 GAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQD 207
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY-KGMSSYNCEPNMDTY 375
R+D A+++ D M G PD YNA++ G+F++ M+ + K + PN+ TY
Sbjct: 208 RLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
++ GL K + + EV+E M+ + P T + LC G A +Y + K
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS--DGEIYEYVIAGLCNIGQL 493
G + Y L++ GF + G + + W +G+ + Y +I GL + G +
Sbjct: 328 TGLVIDAAMYNSLVK---GFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMV 384
Query: 494 ENAVLVMEESLRKGFC-PSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
+ A+ + + + C P + + L + L + A+ +F + +++
Sbjct: 385 DEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVS 433
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 186/395 (47%), Gaps = 2/395 (0%)
Query: 147 VLFFNW-AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
V+ + W ++ + ++ + N+++ R + L M K G P + T ++
Sbjct: 99 VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVL 264
+ F R +VY A+ M ++ G K + N ++ LC+ V A L N M K +
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+V+TYN +ISG G+ + R++ + PD TF+ LI+ + GR+ +A E
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
++ M + PD Y+ +I DE + + M S C P++ TY+ LI+G K
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
S+KV +++F EM RG+V +T T T ++ C G + A ++++ G ++
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y +LL L GK L + +MQ++G +D Y +I G+C G++ +A +
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+G P Y+ + L A LFRK+K
Sbjct: 459 CQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMK 493
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 151/328 (46%), Gaps = 1/328 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ M G P++ + ++D ++ QV A+ +L R+E G+ D + N ++ LC
Sbjct: 173 MFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLC 232
Query: 245 QRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
A+ + + M + ++ +V T+N +I K G+V E E +E++ PD +
Sbjct: 233 SSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIV 292
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T+S LI GL R+D+A E+F M KGC PD Y+ +I+ Y + MK + M
Sbjct: 293 TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM 352
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
S N TYT LI G ++ K+ A E+F M+ G+ P+ T L LC G
Sbjct: 353 SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKI 412
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+++ +K G + Y +++R + G+ D++ + G D Y +
Sbjct: 413 EKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTM 472
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPS 511
+ GL G A + + G P+
Sbjct: 473 MLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 143/280 (51%), Gaps = 1/280 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV +YN ++ L + ++S M K + PD+ T + ++D+ ++ G+V +A
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+ + L D + +++++ LC + A +F M K F +V+TY+I+I+G+
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K +V ++ E+ G +++T++ LI+G RAG+++ A E+F M G P+
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN ++ G ++ + M + ++ TY +I G+ K+ +VADA +++
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCS 456
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
+ +G++P T T+ + L G A +++K ++ G
Sbjct: 457 LNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDG 496
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 100/225 (44%)
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
R ++DD++++F M + P ++ ++S + +D + ++ M N+
Sbjct: 58 RFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLC 117
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
T L++ + +++ AL +M+ G PS T S L C + A+ M+ +
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
+G K ++ Y ++ L + LDL + M++ G D Y +I+GLC+ G+
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+A ++ ++ P ++ L + + ++ A + ++
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 88/195 (45%), Gaps = 6/195 (3%)
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y ++ N I D+ + + M P++ ++RL+S + K +K + ++E+M
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
GI + T L C A+ K K+G + S+ + LL +GF +
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL---NGFCRGD 165
Query: 460 MLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ D ++ +M GY + IY +I GLC Q++NA+ ++ + G P + Y+
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 517 KLSNKLLASNKLESA 531
L + L +S + A
Sbjct: 226 SLISGLCSSGRWSDA 240
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/169 (15%), Positives = 79/169 (46%)
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
N Y ++ ++ K+ D+L++F M+ +PS + L + + ++
Sbjct: 45 NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLW 104
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
++ + +G +L +LL + + L +M + G+ + ++ G C
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ +A+ + ++ + G+ P+ ++Y+ + + L S ++++A +L +++
Sbjct: 165 DRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRME 213
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 195/416 (46%), Gaps = 4/416 (0%)
Query: 132 VGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAK 191
V V+ ++G A + FF WA + DV +YN ++ L K + + +M K
Sbjct: 89 VAAVLRSLKVTGTA-ISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLK 147
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
G+ P+ + +I++ SF R + A+ ++ K D + +++ CLC+
Sbjct: 148 AGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEK 207
Query: 252 ASSLFNSMK--GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A +F+ M G V + + ++ K +V E V ++ GF PD++ ++ +I
Sbjct: 208 AFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMI 267
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
+GL +AG +A++V D M K C P Y ++++ G + + ++ M++
Sbjct: 268 DGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFR 327
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
PN YT LI G KS ++ +A +F+EM++ G P T T ++ LC G A
Sbjct: 328 PNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKS 387
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+++ + GCK ++ Y +++ LS G+ + M G D Y ++ G C
Sbjct: 388 FEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCK 447
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY-NLFRKIKIARQN 544
+G+L+ A +++E + P+ +YS L N L +E +LF + K A +
Sbjct: 448 LGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAET 503
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 184/413 (44%), Gaps = 39/413 (9%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y ++V +L + + + MA G P+ + ++ F ++G++ +A + +
Sbjct: 297 TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEM 356
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ G + D + V++ LC+ + A+ F M +G NV+TY +I G SK+G+V
Sbjct: 357 VEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRV 416
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA- 342
R++K ++A G PDS+T+ L++G + GR+D+A ++ D + + P+ Y++
Sbjct: 417 ANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSL 476
Query: 343 -----------------------------------VISNYISVGDFDECMKYYKGMSSYN 367
+I G DE + ++ M S
Sbjct: 477 VNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEG 536
Query: 368 CEPNMDTYTRLISGLLKSR--KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
C+P+ TY LI+GL +SR +V A + ++ G +P T T LC G
Sbjct: 537 CKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDR 596
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ M ++A G + AY L L G+ + L+ EM G D Y +I
Sbjct: 597 AVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIIN 656
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GL + +LE+A +E + KG P+ Y+ L L + ++ A++ F +
Sbjct: 657 GLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESM 709
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 135/303 (44%), Gaps = 4/303 (1%)
Query: 169 IVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA--GQVYKAIQMLGRLED 226
I+ L + D C + M EG PD T +I+++ R+ +V +A +L LE
Sbjct: 512 IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEK 571
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVE 285
G DA + + LC+ V A + + +V+ Y + +G GQV
Sbjct: 572 VGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDR 631
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+ +E+V +G +PD+ + +I GL + +++DA + FD M KG P Y A++
Sbjct: 632 AVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQ 691
Query: 346 NYISVGDFDECMKYYKGM-SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
G+ DE ++ M + ++ Y LI G K+ KV AL++FE+M+ RG V
Sbjct: 692 ALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNV 751
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P+ T S + L G A + ++ G + +L L + G LL L
Sbjct: 752 PTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKL 811
Query: 465 WHE 467
E
Sbjct: 812 VQE 814
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 183/430 (42%), Gaps = 77/430 (17%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV +Y I++ L + ++ M G PD T ++D F + G++ +
Sbjct: 398 PNVV----TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDE 453
Query: 217 AIQMLGRLEDF--------------GL-----------------KFDAESLNVVLWC--- 242
A Q+L L+ GL K AE+L+ L C
Sbjct: 454 AAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSII 513
Query: 243 --LCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW--SKLGQVVEMERVLKEIVAEG 297
LC+ + A +F M + + TYNI+I+G S+ +V +L ++ G
Sbjct: 514 VGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVG 573
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
+ PD++T++ L GL + G +D A+++ + +G D AY A+ + G D +
Sbjct: 574 YLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAV 633
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
++ M P+ Y +I+GL+K +K+ DA + F+EM+ +G P+ T T+ ++ L
Sbjct: 634 SLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQAL 693
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
C G A ++ S+ A L+ G ++
Sbjct: 694 CHAGNVDEAFHRFE---------SMLARGELV---------GSVM--------------- 720
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
IY+ +I G C +++ A+ + E+ + +G P+ + + L + L+ S K E A L ++
Sbjct: 721 -IYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQE 779
Query: 538 IKIARQNDYA 547
+ +A
Sbjct: 780 MAAGGSPPHA 789
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 142/305 (46%), Gaps = 6/305 (1%)
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
S A E ++P L SI++ + G++ +A ++ R+ G K DA + N+++ LC+
Sbjct: 497 SKAAAETLDPGL-CCSIIV-GLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRS 554
Query: 247 LH--VGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
V A +L + + K L + +TY + G K+G+V ++L+E + G++ D +
Sbjct: 555 RENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVV 614
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
++ L GL G++D A+ +F M +G PD AY +I+ I V ++ K++ M
Sbjct: 615 AYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEM 674
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG-IVPSTGTITSFLEPLCSYGP 422
+P + TYT L+ L + V +A FE ML RG +V S + + C
Sbjct: 675 IGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALK 734
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
AA+ +++ G + L L GK +L EM G P +
Sbjct: 735 VDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTA 794
Query: 483 VIAGL 487
++ GL
Sbjct: 795 ILDGL 799
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 169/422 (40%), Gaps = 47/422 (11%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y ++ + C++ +M + G PD+ T ++++D ++G +A + +
Sbjct: 333 YTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMM 392
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNV----MTYNIVISGWSKLG 281
G K + + ++ L + +G ++ F MKG + +TY ++ G+ KLG
Sbjct: 393 RGGCKPNVVTYTTIIQGLSK---IGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLG 449
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG---------------------------- 313
++ E ++L E+ SP+ +S L+ GL
Sbjct: 450 RLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLC 509
Query: 314 --------RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD--FDECMKYYKGM 363
+ GR+D+A +F M +GC PD YN +I+ + + +
Sbjct: 510 CSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDL 569
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
P+ TYT L GL K +V A+++ EE RG T+ LC G
Sbjct: 570 EKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQV 629
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+ ++++ + G AY ++ L K + EM G Y +
Sbjct: 630 DRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTAL 689
Query: 484 IAGLCNIGQLENAVLVMEESLRKG-FCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+ LC+ G ++ A E L +G S ++Y L + + K+++A LF + I+R
Sbjct: 690 VQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDM-ISR 748
Query: 543 QN 544
N
Sbjct: 749 GN 750
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 173/349 (49%), Gaps = 2/349 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
MA V P T + V D F +AG++ + ++ + + G A +++ CLC+ +
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 249 VGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
A L ++M+ K + Y+ +I+ KL + VE R L E +A PD+LT+
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNR-VEEARELIEKMARYAPPDALTYGP 119
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
++E L + RIDDA+ + M +G PD YN V+S +E ++ M
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
PN+ TY LI+GL K+ ++ A E+F+EM +G VP+ + + ++ C AA
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++ K + C ++ Y L+ LS GK ++ M + G + Y +I G
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
C + +++ A ++E+ + +G P+ + Y+ L N L ++KLE A+ LFR
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFR 348
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 175/384 (45%), Gaps = 2/384 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y +++ L + FD +L M + S +++ + +V +A +++ ++
Sbjct: 48 YGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA 107
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
+ DA + ++ LC+ + A + M + + + YN V+SG + +V
Sbjct: 108 RYAPP-DALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVE 166
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E + +++V + +P+ +T++ LI GL +A RI+ A E+F M KG P +YN +I
Sbjct: 167 EARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLI 226
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ D + M NC PN+ TYT LI GL KS KV A EV + M+ +G+
Sbjct: 227 DGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVT 286
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P+ T + ++ C A + ++ G ++ Y +LL L K L
Sbjct: 287 PNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKL 346
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+ M + Y ++ LC+ QL+ A + E + KG P + Y L+ L
Sbjct: 347 FRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTR 406
Query: 525 SNKLESAYNLFRKIKIARQNDYAR 548
+ K+ A L K+K+ ++N + R
Sbjct: 407 AGKVHEAQELMEKMKLTKRNPFGR 430
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 146/342 (42%), Gaps = 36/342 (10%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +Y IV+ L + K D + +MA G+ P D+FI
Sbjct: 113 DALTYGPIVERLCKTKRIDDALATVEEMATRGIKP---------DAFI------------ 151
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
N VL LCQ V A LF M K ++ NV+TYN +I+G K
Sbjct: 152 --------------YNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKA 197
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
++ + KE+ +G+ P ++++ LI+G + + A +VFD M C P+ Y
Sbjct: 198 WRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTY 257
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+I G + GM PN+ TY+ LI G K R+V +A ++ E+M+
Sbjct: 258 TTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVT 317
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+GI P+ T L LC A +++ + C ++ Y LLR L +
Sbjct: 318 QGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDG 377
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
L+ EM G P D Y+ + GL G++ A +ME+
Sbjct: 378 AHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEK 419
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 135/277 (48%), Gaps = 1/277 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D YN ++ L + + + + M K+ +NP++ T + +++ +A ++ A
Sbjct: 145 IKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAY 204
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ + G S N ++ C++ + AA +F+ M + + NV+TY +I G
Sbjct: 205 ELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGL 264
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
SK G+V VL +V +G +P+ T+S LI+G + R+D+A ++ + M +G P
Sbjct: 265 SKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTV 324
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN ++++ ++ K ++GM+ C P + TY L+ L +++ A ++ E
Sbjct: 325 VTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAE 384
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
M+ +G P T + L G H A + +K +
Sbjct: 385 MIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 36/239 (15%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P + TF+ + +G +AGR++ EV+ M E G + Y +IS VG+FDE K
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
M + Y+ +I+ L K +V +A E+ E+M
Sbjct: 68 LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-------------------AR 108
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
Y PP A Y ++ RL + L EM G D I
Sbjct: 109 YAPPDA-----------------LTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFI 151
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y +V++GLC ++E A L+ E+ +++ P+ + Y+ L N L + ++E+AY LF+++
Sbjct: 152 YNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEM 210
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 1/173 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N +V +Y ++ L + VL M K+GV P++ T S ++D F + +V +A
Sbjct: 249 NCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEA 308
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISG 276
++L ++ G+ + N++L LC+ + A LF M + V+TYN ++
Sbjct: 309 HKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRA 368
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
Q+ R+ E++A+G PD++T+ L GL RAG++ +A E+ + MK
Sbjct: 369 LCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421
>gi|449442339|ref|XP_004138939.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Cucumis sativus]
Length = 559
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 190/402 (47%), Gaps = 12/402 (2%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E AL V V L+ D+V +++R + FF WA + N + + + YN ++ L
Sbjct: 103 MEGALDQVGVYLTTDLVADILHRLRFDEKLAFRFFTWAARQENYSHEPRVYNEMIDILSS 162
Query: 176 RKF----FDFMCNVLSDMAKEGVNP-DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLK 230
++ F +C++L M + N +E L ++ ++ + +Q + + +K
Sbjct: 163 TRYKVKQFRIVCDLLDYMKRNDKNTVPVEVLFGILRNY--TDKYLTCLQKFAKKKKVIVK 220
Query: 231 FDAE--SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMER 288
E + N++L LC+ V A +L +K K+ + TYNI+ GW ++ R
Sbjct: 221 RQPEINAFNLLLDALCKCSLVEDAEALLKKVKKKLKPDANTYNIMFFGWCRVRNPGRGMR 280
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG---PDTNAYNAVIS 345
VL+E++ GF PD+ T++ I +AG + +A E+F+ M+ KG P Y +I
Sbjct: 281 VLEEMIELGFDPDNFTYNTAIASFCKAGMLKEACELFEFMRTKGSALSSPTAKTYAIMIV 340
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
++ G +EC K+ + M C P++ TY +I G+ + KV +A EEM +G P
Sbjct: 341 ALVNNGRMEECFKFLEYMIKSGCLPDVSTYKEMIEGICVAGKVQEAYMFLEEMGKKGYPP 400
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
T FL+ LC A+ + +VGC S+ Y +L+ +W
Sbjct: 401 DIVTYNCFLKVLCDNKMSDDALRHCDRMIEVGCLPSVQTYNMLISMFFEMNDHNGAFQIW 460
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
EM G D + Y +I GL ++ +A L++EE + KG
Sbjct: 461 LEMDRYGCTRDVDSYCIMIEGLFGCNKVGDACLLLEEVVNKG 502
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 131/296 (44%), Gaps = 4/296 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN++ R + VL +M + G +PD T + + SF +AG + +A ++
Sbjct: 258 DANTYNIMFFGWCRVRNPGRGMRVLEEMIELGFDPDNFTYNTAIASFCKAGMLKEACELF 317
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN----SMKGKVLFNVMTYNIVISGW 277
+ G + + + ++ G F +K L +V TY +I G
Sbjct: 318 EFMRTKGSALSSPTAKTYAIMIVALVNNGRMEECFKFLEYMIKSGCLPDVSTYKEMIEGI 377
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
G+V E L+E+ +G+ PD +T++ ++ L DDA+ D M E GC P
Sbjct: 378 CVAGKVQEAYMFLEEMGKKGYPPDIVTYNCFLKVLCDNKMSDDALRHCDRMIEVGCLPSV 437
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +IS + + D + + + M Y C ++D+Y +I GL KV DA + EE
Sbjct: 438 QTYNMLISMFFEMNDHNGAFQIWLEMDRYGCTRDVDSYCIMIEGLFGCNKVGDACLLLEE 497
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
++++G+ SFL L G + + RK + + L +R+S
Sbjct: 498 VVNKGMKLPFRKFDSFLMQLSVNGNLKGIHRLSEHMRKFYNRAMARRFSLNQKRMS 553
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 184/360 (51%), Gaps = 4/360 (1%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
++++ M + G+ PD+ + ++DS + G V A+ + ++E++G++ D ++ L
Sbjct: 162 SMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGL 221
Query: 244 CQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C A L M K K+ +V+T+N +I + K G++++ + + E++ +P+
Sbjct: 222 CNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNI 281
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
T++ LI GL GR+D+A ++F M+ KGC PD AY ++I+ + ++ MK +
Sbjct: 282 FTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYE 341
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
MS N TYT LI G K A EVF M+ RG+ P+ T L LC G
Sbjct: 342 MSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGK 401
Query: 423 PHAAMMMYKKARKV---GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
+ A+M+++ +K G ++ Y +LL L GK L ++ +MQ+
Sbjct: 402 VNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIIT 461
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y +I G+C G++++A+ + KG P+ + Y+ + + L + A+ LFRK+K
Sbjct: 462 YTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMK 521
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 193/381 (50%), Gaps = 4/381 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+ D+ + N+++ + + L + K G PD+ T + +++ F ++ +A+
Sbjct: 102 VSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAM 161
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGW 277
M+ ++ + G+K D ++ LC+ HV A SLFN M+ + +V+ Y +++G
Sbjct: 162 SMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGL 221
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
G+ + + +L+ ++ PD +TF+ LI+ + G++ DA E+++ M + P+
Sbjct: 222 CNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNI 281
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y ++I+ G DE + + M + C P++ YT LI+G K +KV DA+++F E
Sbjct: 282 FTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYE 341
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M +G+ +T T T+ ++ G P+ A ++ G ++ Y +LL L GK
Sbjct: 342 MSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGK 401
Query: 458 CGMLLDLWHEMQE---SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
L ++ +MQ+ G P + Y ++ GLC G+LE A++V + ++ +
Sbjct: 402 VNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIIT 461
Query: 515 YSKLSNKLLASNKLESAYNLF 535
Y+ + + + K++ A NLF
Sbjct: 462 YTIIIQGMCKAGKVKDALNLF 482
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 178/399 (44%), Gaps = 42/399 (10%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ LF + P + + ++ + + K FD + N+ + GV+ DL T ++
Sbjct: 54 EALDLFSHMVESRP--LPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNL 111
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
+M+ F ++ Q A LG+L G + D
Sbjct: 112 LMNCFCQSSQPCLASSFLGKLMKLGFEPD------------------------------- 140
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+ T+ +I+G+ ++ E ++ ++V G PD + ++ +I+ L + G +D+A+
Sbjct: 141 ---IFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALS 197
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+F+ M+ G PD Y ++++ + G + + +GM +P++ T+ LI +
Sbjct: 198 LFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFV 257
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
K K+ DA E++ EM+ I P+ T TS + LC G A M+ GC +
Sbjct: 258 KEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVV 317
Query: 444 AYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
AY L ++GF KC + D +++EM + G + Y +I G +G+ A V
Sbjct: 318 AYTSL---INGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVF 374
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ +G P+ Y+ L + L + K+ A +F ++
Sbjct: 375 GHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQ 413
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 144/321 (44%), Gaps = 45/321 (14%)
Query: 159 VAKDVKSYNVIVKAL---GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
+ DV Y +V L GR + D + L M K + PD+ T + ++D+F++ G++
Sbjct: 207 IRPDVVMYTSLVNGLCNSGRWRDADLL---LRGMMKRKIKPDVITFNALIDAFVKEGKLL 263
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVI 274
A ++ + + + + ++ LC + A +F M+ K F +V+ Y +I
Sbjct: 264 DAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLI 323
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G+ K +V + ++ E+ +G + +++T++ LI+G G G+ + A EVF M +G
Sbjct: 324 NGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVP 383
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE---PNMDTYTRLI------------ 379
P+ YN ++ G ++ + ++ M + PN+ TY L+
Sbjct: 384 PNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKA 443
Query: 380 -----------------------SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
G+ K+ KV DAL +F + +G+ P+ T T+ +
Sbjct: 444 LMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISG 503
Query: 417 LCSYGPPHAAMMMYKKARKVG 437
L G A ++++K ++ G
Sbjct: 504 LFREGLMLEAHVLFRKMKEDG 524
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 124/285 (43%), Gaps = 41/285 (14%)
Query: 159 VAKDVKSYNVIVKALGRR-KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ DV ++N ++ A + K D + ++M + + P++ T + +++ G++ +A
Sbjct: 242 IKPDVITFNALIDAFVKEGKLLDAK-ELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEA 300
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISG 276
QM +E G D + ++ C+ V A +F M K L N +TY +I G
Sbjct: 301 RQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQG 360
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK---GC 333
+ +G+ + V +V+ G P+ T++ L+ L G+++ A+ +F+ M+++ G
Sbjct: 361 FGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGV 420
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMS----------------------------- 364
P+ YN ++ G ++ + + M
Sbjct: 421 PPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALN 480
Query: 365 ------SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
S +PN+ TYT +ISGL + + +A +F +M + G+
Sbjct: 481 LFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 81/197 (41%)
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y ++ N + F+E + + M P++ +TRL++ + K +K + + + +
Sbjct: 39 YREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQ 98
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
G+ T + C P A K K+G + + + L+ +
Sbjct: 99 IMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIE 158
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ + ++M E G D IY +I LC G ++NA+ + + G P ++Y+ L
Sbjct: 159 EAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLV 218
Query: 520 NKLLASNKLESAYNLFR 536
N L S + A L R
Sbjct: 219 NGLCNSGRWRDADLLLR 235
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAK---EGVNPDLETLSIVMDSFIRAGQVY 215
V ++++YNV++ L + + DM K +GV P++ T ++++ G++
Sbjct: 382 VPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLE 441
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
KA+ + G ++ + + +++ +C+ V A +LF S+ K V NV+TY +I
Sbjct: 442 KALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMI 501
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFS 299
SG + G ++E + +++ +G S
Sbjct: 502 SGLFREGLMLEAHVLFRKMKEDGVS 526
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 174/356 (48%), Gaps = 5/356 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PN+ +Y V+V L +R D N+L+ M + ++ S V+DS +
Sbjct: 222 QPNLV----TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVI 274
A+ + +E+ G++ + + + ++ CLC AS L + M + K+ NV+T+N +I
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+ K G++VE E++ E++ PD T+S LI G R+D+A +F+ M K C
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ YN +I+ + DE ++ ++ MS N TYT LI G ++R +A V
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F++M+ G+ P+ T + L+ LC G AM++++ ++ + ++ Y +++ +
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
GK DL+ + G D IY +I+G C G E A + + G P
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 165/348 (47%), Gaps = 36/348 (10%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + G P+L T +V++ + G + A +L ++E ++ + + V+ LC+ H
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
A +LF M+ K V NV+TY+ +IS + + R+L +++ +P+ +TF+
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI+ + G++ +A +++D M ++ PD Y+++I+ + DE ++ M S +
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
C PN+ TY LI+G K++++ + +E+F EM RG+V +T T T+ + A
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
M++K+ G ++ Y LL GL
Sbjct: 456 MVFKQMVSDGVHPNIMTYNTLLD-----------------------------------GL 480
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
C G+LE A++V E R P+ Y+ + + + K+E ++LF
Sbjct: 481 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 528
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 186/398 (46%), Gaps = 7/398 (1%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+V+ ++ ++ ++ +YN+++ RR +L M K G P + TLS ++
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VL 264
+ + ++ A+ ++ ++ + G + D + ++ L A +L + M +
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
N++TY +V++G K G + +L ++ A + + +S +I+ L + DDA+ +
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F M+ KG P+ Y+++IS + + + + M PN+ T+ LI +K
Sbjct: 283 FTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
K+ +A ++++EM+ R I P T +S + C + A M++ C ++
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402
Query: 445 YKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
Y L ++GF K + ++L+ EM + G + Y +I G +NA +V +
Sbjct: 403 YNTL---INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 459
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + G P+ + Y+ L + L + KLE A +F ++
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 497
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 139/302 (46%), Gaps = 38/302 (12%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF +++ V +V +Y+ ++ L + + +LSDM + +NP++ T +
Sbjct: 278 DALNLF--TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 204 VMDSFIRAGQVYKAIQ-------------------------MLGRLEDFGLKFD------ 232
++D+F++ G++ +A + M RL++ F+
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 233 ----AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEME 287
+ N ++ C+ + LF M + L N +TY +I G+ + +
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
V K++V++G P+ +T++ L++GL + G+++ A+ VF+ ++ P YN +I
Sbjct: 456 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
G ++ + +S +P++ Y +ISG + +A +F +M + G +P +
Sbjct: 516 CKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Query: 408 GT 409
GT
Sbjct: 576 GT 577
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 102/219 (46%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P F+ L+ + + + D I + + M+ G + YN +I+ + +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
M EP++ T + L++G ++++DA+ + ++M++ G P T T T+ + L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
+ A+ + + + GC+ +L Y +++ L G + +L ++M+ + ++ I
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
Y VI LC ++A+ + E KG P+ + YS L
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 88/203 (43%)
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y ++ N + D+ + + GM P++ + +L+S + K +K + + E+M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
GI + T + C A+ + K K+G + S+ LL +
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ L +M E GY D + +I GL + AV +++ +++G P+ + Y +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 520 NKLLASNKLESAYNLFRKIKIAR 542
N L ++ A+NL K++ A+
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAK 255
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 189/381 (49%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
VA +V +YN++V+AL R +VL DM G +P+ T + ++ +F RAG+V +A
Sbjct: 153 VAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAE 212
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+++ + + GLK + + N V+ +C+ + A +F+ M K + + ++YN ++ G+
Sbjct: 213 RLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGY 272
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K+G E V E+ +G PD +TF+ LI + +AG ++ A+ + M+E+G +
Sbjct: 273 CKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNE 332
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+ A+I + G D+ + + M +P++ Y LI+G ++ +A E+ E
Sbjct: 333 ITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVRE 392
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M +G+ P T ++ L C G H+A + ++ + G Y L+R L +
Sbjct: 393 MEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKR 452
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
G L+ M G D Y +I G C G +E A+ + +E ++ G P + YS
Sbjct: 453 LGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSV 512
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L N L S + + A L K+
Sbjct: 513 LINGLSKSARTKEAQRLLFKL 533
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 159/320 (49%), Gaps = 2/320 (0%)
Query: 228 GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEM 286
G+ + + N+++ LC R H A S+ M+G N +TYN +++ + + G+V
Sbjct: 152 GVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRA 211
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
ER++ + G P+ +TF+ ++ G+ +AGR++DA +VFD M ++G PD +YN ++
Sbjct: 212 ERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGG 271
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
Y VG E + + M+ P++ T+T LI + K+ + A+ + EM +RG+ +
Sbjct: 272 YCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMN 331
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
T T+ ++ C G A++ ++ R+ + S+ Y L+ G+ +L
Sbjct: 332 EITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVR 391
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
EM+ G D Y +++ C G +A + ++ L G P + YS L L
Sbjct: 392 EMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEK 451
Query: 527 KLESAYNLFRK-IKIARQND 545
+L A+ LF+ I + Q D
Sbjct: 452 RLGDAHVLFKNMISLGLQPD 471
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 139/292 (47%), Gaps = 7/292 (2%)
Query: 251 AASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
+A F+SM V NV TYNI++ G E VL+++ G P+++T++ L+
Sbjct: 140 SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLV 199
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
RAG +D A + D M+E G P+ +N+V++ G ++ K + M
Sbjct: 200 AAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLA 259
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P+ +Y L+ G K +AL VF EM +GI+P T TS + +C G A+ +
Sbjct: 260 PDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGL 319
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW---HEMQESGYPSDGEIYEYVIAG 486
++ R+ G +++ + L + GF K G L D EM++ Y +I G
Sbjct: 320 VREMRERGLQMNEITFTAL---IDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALING 376
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
C +G+++ A ++ E KG P + YS + + + SA+ L +++
Sbjct: 377 YCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQM 428
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 177/378 (46%), Gaps = 17/378 (4%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F+ +K +A D SYN +V + +V ++M ++G+ PD+ T + ++
Sbjct: 250 FDEMVKE-GLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMC 308
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVM 268
+AG + +A+ ++ + + GL+ + + ++ C++ + A M+ ++ +V+
Sbjct: 309 KAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVV 368
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
YN +I+G+ +G++ E +++E+ A+G PD +T+S ++ + G A ++ M
Sbjct: 369 CYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQM 428
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
E G PD Y+++I + +K M S +P+ TYT LI G K V
Sbjct: 429 LENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNV 488
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLC-SYGPPHAAMMMYK--KARKVGCKLSLTAY 445
AL + +EM+ G++P T + + L S A +++K V + A
Sbjct: 489 ERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDAL 548
Query: 446 ---------KLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
K +L L GF G++ + ++ + + + DG +Y +I G C G +
Sbjct: 549 MRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNV 608
Query: 494 ENAVLVMEESLRKGFCPS 511
A+ ++ L+ GF P+
Sbjct: 609 MKALSFHKQMLQCGFAPN 626
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 131/274 (47%), Gaps = 1/274 (0%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V+ YN V+ S + R ++++G +P+ T++ L+ L G +A+ V
Sbjct: 122 SVLAYNAVLLALSD-ASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVL 180
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
M+ GC P+ YN +++ + G+ D + M +PN+ T+ +++G+ K+
Sbjct: 181 RDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKA 240
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
++ DA +VF+EM+ G+ P + + + C G H A+ ++ + + G + +
Sbjct: 241 GRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTF 300
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ + G + L EM+E G + + +I G C G L++A+L + E +
Sbjct: 301 TSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQ 360
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
PS + Y+ L N +++ A L R+++
Sbjct: 361 CRIQPSVVCYNALINGYCMVGRMDEARELVREME 394
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 140/335 (41%), Gaps = 16/335 (4%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ + V YN ++ D ++ +M +GV PD+ T S ++ ++ + G
Sbjct: 358 MRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGD 417
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNI 272
+ A Q+ ++ + G+ DA + + ++ LC+ +G A LF +M L + +TY
Sbjct: 418 THSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTS 477
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G K G V + E+V G PD +T+S LI GL ++ R +A + + +
Sbjct: 478 LIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEE 537
Query: 333 CGPDTNAYNAV---------------ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
P Y+A+ + + G +E K Y+ + N + Y+
Sbjct: 538 PVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSV 597
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
LI G + V AL ++ML G P++ + S + L G A + ++
Sbjct: 598 LIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCC 657
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
A K L+ G +LD+ H M G
Sbjct: 658 SLADAEASKALIDLNLKEGNVDAVLDVLHGMARDG 692
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 107/238 (44%), Gaps = 18/238 (7%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
G+A VLF N + D +Y ++ + + ++ +M K GV PD+ T S
Sbjct: 454 GDAHVLFKNMI--SLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYS 511
Query: 203 IVMDSFIRAGQVYKAIQMLGRL-----EDFGLKFDA----------ESLNVVLWCLCQRL 247
++++ ++ + +A ++L +L +K+DA +S+ +L C +
Sbjct: 512 VLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKG 571
Query: 248 HVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
+ A ++ S+ + + Y+++I G + G V++ K+++ GF+P+S +
Sbjct: 572 LMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTI 631
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
LI GL G + +A +V + D A A+I + G+ D + GM+
Sbjct: 632 SLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMA 689
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 196/416 (47%), Gaps = 4/416 (0%)
Query: 132 VGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAK 191
V V+ ++G A + FF WA + DV +YN ++ L K + + +M K
Sbjct: 89 VAAVLRSLKVTGTA-ISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLK 147
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
G+ P+ + +I++ SF R + A+ ++ K D + +++ CLC+
Sbjct: 148 AGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEK 207
Query: 252 ASSLFNSMK--GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A +F+ M G V + + ++ K +V E V ++ GF PD++ ++ +I
Sbjct: 208 AFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMI 267
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
+GL +AG +A++V D M K C P Y ++++ G + + ++ M++
Sbjct: 268 DGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFR 327
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
PN YT LI G KS ++ +A +F+EM++ G P T T ++ LC G A
Sbjct: 328 PNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKS 387
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+++ + GCK ++ Y +++ LS G+ + M G D Y ++ G C
Sbjct: 388 FEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCK 447
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY-NLFRKIKIARQN 544
+G+L+ A +++E + P+ +YS L L +E+ +LF + K A +N
Sbjct: 448 LGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAEN 503
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 182/410 (44%), Gaps = 39/410 (9%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y ++V +L + + + MA G P+ + ++ F ++G++ +A + +
Sbjct: 297 TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEM 356
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ G + D + V++ LC+ + A+ F M +G NV+TY +I G SK+G+V
Sbjct: 357 VEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRV 416
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA- 342
R++K ++A G PDS+T+ L++G + GR+D+A ++ D + + P+ Y++
Sbjct: 417 ANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSL 476
Query: 343 -----------------------------------VISNYISVGDFDECMKYYKGMSSYN 367
+I G DE + ++ M S
Sbjct: 477 VKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEG 536
Query: 368 CEPNMDTYTRLISGLLKSR--KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
C+P+ TY LI+GL +SR +V A + ++ G +P T T LC G
Sbjct: 537 CKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDR 596
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ M ++A G + AY L L G+ + L+ EM G D Y +I
Sbjct: 597 AVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIIN 656
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
GL +LE+A +E + KG P+ Y+ L L + ++ A++ F
Sbjct: 657 GLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRF 706
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 179/381 (46%), Gaps = 4/381 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN ++ L + VL +M + P T I+++S +AG + +A ++
Sbjct: 259 DAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELF 318
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ G + ++ ++ + + A SLF+ M + +V+T+ ++I G K
Sbjct: 319 RVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKS 378
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + + +E++ G P+ +T++ +I+GL + GR+ +A + M GC PD+ Y
Sbjct: 379 GNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTY 438
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE-VFEEML 399
++ + +G DE + + + PN+ Y+ L+ GL V + L+ +FE+
Sbjct: 439 ICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSK 498
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL--SGFGK 457
G S + LC G A ++++ GCK T Y +L+ L S +
Sbjct: 499 AAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENR 558
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L H+++ GY D Y + GLC IG+++ AV ++EE+ +G+ + Y+
Sbjct: 559 VERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTA 618
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L L +++ A +LF+++
Sbjct: 619 LCTGLCYQGQVDRAVSLFQEM 639
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 136/303 (44%), Gaps = 4/303 (1%)
Query: 169 IVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA--GQVYKAIQMLGRLED 226
I+ L + D C + M EG PD T +I+++ R+ +V +A +L LE
Sbjct: 512 IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEM 571
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVE 285
G DA + + LC+ V A + + +V+ Y + +G GQV
Sbjct: 572 VGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDR 631
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+ +E+V +G +PD+ + +I GL + +++DA + FD M KG P Y A++
Sbjct: 632 AVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQ 691
Query: 346 NYISVGDFDECMKYYKGM-SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
G+ DE ++GM + ++ Y LI G K+ KV AL++FE+M+ RG V
Sbjct: 692 ALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNV 751
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P+ T S + L G A + ++ G + +L L + G LL L
Sbjct: 752 PTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKL 811
Query: 465 WHE 467
E
Sbjct: 812 VQE 814
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 181/436 (41%), Gaps = 89/436 (20%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV +Y I++ L + ++ M G PD T ++D F + G++ +
Sbjct: 398 PNVV----TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDE 453
Query: 217 AIQMLGRLEDF--------------GL-----------------KFDAESLNVVLWC--- 242
A Q+L L+ GL K AE+L+ L C
Sbjct: 454 AAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSII 513
Query: 243 --LCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW--SKLGQVVEMERVLKEIVAEG 297
LC+ + A +F M + + TYNI+I+G S+ +V +L ++ G
Sbjct: 514 VGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVG 573
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
+ PD++T++ L GL + G +D A+++ + +G D AY A+ + G D +
Sbjct: 574 YLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAV 633
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
++ M P+ Y +I+GL+K +K+ DA + F+EM+ +G P+ T T+ ++ L
Sbjct: 634 SLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQAL 693
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
C G A ++ GML + G
Sbjct: 694 CHAGNVDEAFHRFE---------------------------GML-------------ARG 713
Query: 478 E------IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
E IY+ +I G C +++ A+ + E+ + +G P+ + + L + L+ S K E A
Sbjct: 714 ELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKA 773
Query: 532 YNLFRKIKIARQNDYA 547
L +++ +A
Sbjct: 774 QELLQEMAAGGSPPHA 789
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 198/418 (47%), Gaps = 21/418 (5%)
Query: 106 FLQKLKGKGVIEDAL-WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
++ L+ G + D + +NV ++G G + VL + +VA DV
Sbjct: 164 IMEILENSGAVPDVITYNV-------LIGGYCKSGEIDKALQVL------ERMSVAPDVV 210
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+++L VL + PD+ T +I++++ V +A+++L +
Sbjct: 211 TYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEM 270
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF----NVMTYNIVISGWSKL 280
G K D + NV++ +C+ + A N+M L+ NV+T+NI++
Sbjct: 271 RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMP---LYGCQPNVITHNIILRSMCST 327
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ ++ ER+L +++ +G SP +TF+ LI L R + AI+V + M + GC P++ +Y
Sbjct: 328 GRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSY 387
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N ++ + D ++Y + M S C P++ TY L++ L K K A+E+ ++
Sbjct: 388 NPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSS 447
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G P T + ++ L G A + ++ R+ G K + Y LLR L GK
Sbjct: 448 KGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDE 507
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+ ++H+M+ Y ++ GLC Q A+ + + KG P++ Y+ L
Sbjct: 508 AIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTIL 565
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 190/407 (46%), Gaps = 7/407 (1%)
Query: 134 KVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG 193
K+V G L E + F I ++ DV + +++ R ++ + G
Sbjct: 116 KLVRNGEL--EEGLKFLERMIYQGDIP-DVIACTSLIRGFCRSGKTRKATRIMEILENSG 172
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAAS 253
PD+ T ++++ + ++G++ KA+Q+L R+ + D + N +L LC + A
Sbjct: 173 AVPDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKEAM 229
Query: 254 SLFN-SMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
+ + M+ + +V+TY I+I V + ++L E+ +G PD +T++ LI G+
Sbjct: 230 EVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGI 289
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
+ GR+D+AI+ + M GC P+ +N ++ + S G + + + M C P++
Sbjct: 290 CKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSV 349
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
T+ LI+ L + R + A++V E+M G +P++ + L C A+ +
Sbjct: 350 VTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEI 409
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
GC + Y LL L GK +++ +++ G Y VI GL +G+
Sbjct: 410 MVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 469
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
E A ++EE RKG P + YS L L K++ A +F ++
Sbjct: 470 TEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDME 516
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 135/290 (46%), Gaps = 3/290 (1%)
Query: 249 VGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
+G SS N + G F NI + + G++ E + L+ ++ +G PD + + L
Sbjct: 89 IGMESSSPNGVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSL 148
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I G R+G+ A + + ++ G PD YN +I Y G+ D+ ++ + MS
Sbjct: 149 IRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSV--- 205
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P++ TY ++ L S K+ +A+EV + + R P T T +E C+ AM
Sbjct: 206 APDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMK 265
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ + RK GCK + Y +L+ + G+ + + M G + + ++ +C
Sbjct: 266 LLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMC 325
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ G+ +A ++ + LRKG PS + ++ L N L L A ++ K+
Sbjct: 326 STGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKM 375
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 110/221 (49%), Gaps = 1/221 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V ++N+++ L R++ +VL M K G P+ + + ++ F + ++ +AI+ L
Sbjct: 349 VVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLE 408
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM-TYNIVISGWSKLG 281
+ G D + N +L LC+ AA + N + K V+ TYN VI G +K+G
Sbjct: 409 IMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVG 468
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ +L+E+ +G PD +T+S L+ GLG G++D+AI++F M+ P YN
Sbjct: 469 KTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYN 528
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
A++ + + M C+P TYT LI G+
Sbjct: 529 AIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 5/203 (2%)
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
A N + + G+ +E +K+ + M P++ T LI G +S K A + E +
Sbjct: 109 ASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEIL 168
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+ G VP T + C G A+ + ++ + + Y +LR L GK
Sbjct: 169 ENSGAVPDVITYNVLIGGYCKSGEIDKALQVLER---MSVAPDVVTYNTILRSLCDSGKL 225
Query: 459 GMLLD-LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
++ L +MQ YP D Y +I CN + A+ +++E +KG P + Y+
Sbjct: 226 KEAMEVLDRQMQRECYP-DVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 284
Query: 518 LSNKLLASNKLESAYNLFRKIKI 540
L N + +L+ A + +
Sbjct: 285 LINGICKEGRLDEAIKFLNNMPL 307
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 198/417 (47%), Gaps = 42/417 (10%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y +V L + D VL M ++G +P L+T ++V+D +AG+V +A ++ +
Sbjct: 79 TYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDM 138
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-----VLFNVMTYNIVISGWSK 279
G + DA ++ LC+ A +L+ + + +V+TY +I G K
Sbjct: 139 LGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCK 198
Query: 280 LGQVVEMERVLK-EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
G+++E +V E V GF PD++T++ +I+GL + GR+++ E F M+ +G PD
Sbjct: 199 AGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAV 258
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
Y A+I ++ + + Y+ M + TY ++ GL K+ +VA+A F M
Sbjct: 259 TYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAM 318
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK- 457
+RG V + T ++ ++ CS G AA+ ++++ GC+ +L +Y +++R L GK
Sbjct: 319 EERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKL 378
Query: 458 -----------------------------CGML------LDLWHEMQESGYPSDGEIYEY 482
C L ++L+ M G + Y
Sbjct: 379 AKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSI 438
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ G+C G LE A+ + E + +G P +V++ L L + +++ A +FR+++
Sbjct: 439 LMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELE 495
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 175/356 (49%), Gaps = 18/356 (5%)
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
+PD+ ++V++ R ++ +A +L R G + D + NV + LC+ V A
Sbjct: 4 SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63
Query: 255 LFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
L M + K L +TY ++ G K G++ E VL+++V +G SP T++ +I+GL
Sbjct: 64 LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS----YNCE 369
+AGR+++A +F M GC PD Y A+I G +E YK ++
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183
Query: 370 PNMDTYTRLISGLLKSRKVADALEVF-EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P++ TYT LI GL K+ ++ +A +VF +E ++RG +P T TS ++ LC G
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIA 485
+ + R G + Y L + GF K M+ ++ +M +SG Y ++
Sbjct: 244 RFHEMRNRGYEPDAVTYAAL---IDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILD 300
Query: 486 GLCNIGQLENA---VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GLC G++ A L MEE +G + + YS L + + + +A LFR++
Sbjct: 301 GLCKAGRVAEAYATFLAMEE---RGCVATVVTYSALMDGFCSEGNVSAAVELFRRM 353
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 179/409 (43%), Gaps = 22/409 (5%)
Query: 100 ERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNV 159
E R +F+ L G G DA + L GK L EA N H
Sbjct: 129 EEARRIFVDML-GNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEA-----NARKHHATA 182
Query: 160 AKDVKSYNVIVKAL---GR----RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
DV +Y ++ L GR R+ FD + + G PD T + ++D + G
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFD------DEAVERGFIPDAVTYTSIIDGLCKLG 236
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYN 271
+V + + + + G + DA + ++ + + A ++ M + + + +TYN
Sbjct: 237 RVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYN 296
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
I++ G K G+V E + G +T+S L++G G + A+E+F M ++
Sbjct: 297 IILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDR 356
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS-RKVAD 390
GC P+ +YN +I G + Y++ + P++ T+ + GL + V+D
Sbjct: 357 GCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSD 416
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
+E+FE M+ +G P+ + + ++ +C G A+ ++++ G + + L+R
Sbjct: 417 GVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIR 476
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
L G+ L+++ E++ P D Y ++ GL ++E A L+
Sbjct: 477 WLCIAGRVDEALEVFRELERRSAP-DAWSYWSLLDGLSRCERMEEARLL 524
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 114/246 (46%), Gaps = 5/246 (2%)
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
SPD + F+ +I GL R R+D+A V + GC PD YN I D+ +
Sbjct: 4 SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
K M C P TYT L+ GLLK+ ++ +A+ V E+M+++G P+ T T ++ L
Sbjct: 64 LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS--- 475
G A ++ GC+ Y L++ L GK L+ E + +
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183
Query: 476 -DGEIYEYVIAGLCNIGQLENAVLVM-EESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
D Y +I GLC G++ A V +E++ +GF P + Y+ + + L ++E
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243
Query: 534 LFRKIK 539
F +++
Sbjct: 244 RFHEMR 249
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 120/243 (49%), Gaps = 3/243 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN+I+ L + M + G + T S +MD F G V A+++ R+
Sbjct: 294 TYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRM 353
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG-WSKLGQ 282
D G + + S N+++ LC+ + A F + + ++ +V T+N + G +L
Sbjct: 354 LDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDT 413
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V + + + +V++G SP+ ++S L++G+ RAG ++ A+E+F M +G PD +N
Sbjct: 414 VSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNT 473
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I G DE ++ ++ + + P+ +Y L+ GL + ++ +A + M +G
Sbjct: 474 LIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDGLSRCERMEEARLLSFHMKLQG 532
Query: 403 IVP 405
P
Sbjct: 533 CAP 535
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 4/214 (1%)
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
C PD A+ VI+ DE + CEP+ TY I GL K+ +V DA
Sbjct: 3 CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
++ ++M ++ +P+T T T+ ++ L G AM + ++ + G +L Y +++ L
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA-VLVMEESLRKGFC-- 509
S G+ ++ +M +G D +Y +I GLC G+ E A L E + RK
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182
Query: 510 -PSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
P + Y+ L + L + ++ A +F + R
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVER 216
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 19/400 (4%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
NL + + FFNW P +V SY+ ++ L R + + M K + +E
Sbjct: 78 NLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCS--IE 135
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF-NS 258
+ V+ +V++ + G +F K N +L L + L + +++
Sbjct: 136 DVLFVL-------EVFRKMNADG---EFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLEL 185
Query: 259 MKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+ ++ N+ T+N +++G+ K+G VVE E +IV G PD+ T++ LI G R +
Sbjct: 186 LNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGV 245
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
D+A EVF M +KGC + +Y +I G +E +K + M+ NC P + TYT L
Sbjct: 246 DNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVL 305
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I L S + +AL +F EM ++G P+ T T ++ LC A M + + G
Sbjct: 306 IYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGL 365
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWH---EMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
S+ Y L + G+ K GM+ D + M+ + + Y +I GLC ++
Sbjct: 366 IPSVVTYNAL---IDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHK 422
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
A+ ++ + L + PS + Y+ L + N LESAY L
Sbjct: 423 AMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL 462
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 182/387 (47%), Gaps = 3/387 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ LF +K +V +Y V++ L + D +LS+M+++G+ P + T +
Sbjct: 317 EALNLFNE--MKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNA 374
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
++D + + G + A ++L +E + + N ++ LC++ V A +L N M + K
Sbjct: 375 LIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK 434
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ +++TYN +I G K+ + R+L + G PD T+S I+ L + GR+++A
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAG 494
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+FD++K KG + Y A+I Y VG D + M + C PN TY LI GL
Sbjct: 495 TLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K +K+ +A + +ML G+ P+ T T + + G A+ ++ +G + +
Sbjct: 555 CKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDV 614
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L G + D+ +M E G D Y +I G +G A ++
Sbjct: 615 CTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKC 674
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLE 529
+ G PS + S L L N+++
Sbjct: 675 MVDTGCKPSLYIVSILIKNLSHENRMK 701
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 167/384 (43%), Gaps = 5/384 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HP D +Y ++ R K D V M ++G + + + ++ AG++
Sbjct: 226 HP----DTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRIN 281
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
+A+++ + + + V+++ L A +LFN MK K NV TY ++I
Sbjct: 282 EALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLI 341
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G K ++ E ++L E+ +G P +T++ LI+G + G IDDA E+ D M+ CG
Sbjct: 342 DGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCG 401
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+T YN +I + M M P++ TY LI G K + A +
Sbjct: 402 PNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRL 461
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
M + G+VP T + F++ LC G A ++ + G K + Y L+
Sbjct: 462 LSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCK 521
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK + L M + Y +I GLC +++ A ++ + L G P+ +
Sbjct: 522 VGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVT 581
Query: 515 YSKLSNKLLASNKLESAYNLFRKI 538
Y+ L ++L + A +F +
Sbjct: 582 YTILIGEMLKDGAFDHALKVFNHM 605
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 161/353 (45%), Gaps = 1/353 (0%)
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
S + + G++PD T + ++ R V A ++ + G + + S ++ LC+
Sbjct: 218 SKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEA 277
Query: 247 LHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
+ A LF M + V TY ++I S G+ VE + E+ +G P+ T+
Sbjct: 278 GRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTY 337
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LI+GL + ++D+A ++ M EKG P YNA+I Y G D+ + M S
Sbjct: 338 TVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMES 397
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
+C PN TY LI GL K RKV A+ + +ML+R + PS T S + C +
Sbjct: 398 NSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLES 457
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A + + G Y + + L G+ L+ ++ G ++ IY +I
Sbjct: 458 AYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALID 517
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G C +G+++ A ++E L P+ Y+ L L K++ A +L K+
Sbjct: 518 GYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKM 570
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 163/375 (43%), Gaps = 1/375 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SY ++ L + + +DM ++ P + T ++++ + +G+ +A+ + +
Sbjct: 266 SYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEM 325
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
++ G + + + V++ LC+ + A + + M K L +V+TYN +I G+ K G +
Sbjct: 326 KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMI 385
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ +L + + P++ T++ LI GL + ++ A+ + + M E+ P YN++
Sbjct: 386 DDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSL 445
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I V D + + M+ P+ TY+ I L K +V +A +F+ + +G+
Sbjct: 446 IHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGV 505
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+ T+ ++ C G A + ++ C + Y +L+ L K
Sbjct: 506 KANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASS 565
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L +M G Y +I + G ++A+ V + G+ P Y+ +
Sbjct: 566 LVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYF 625
Query: 524 ASNKLESAYNLFRKI 538
+ LE ++ K+
Sbjct: 626 SQGMLEEVDDVIAKM 640
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 150/342 (43%), Gaps = 10/342 (2%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YNV+++ L + K ++++ M GV P + T +I++ ++ G A+++ +
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
G + D + L + + + M + +L +++TY ++I G+++LG
Sbjct: 606 VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLT 665
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
LK +V G P S LI+ L R+ + T E G +N +
Sbjct: 666 HRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKE------TRSEIGIDSVSNVNSVD 719
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I++ +++ +K ++ M + C ++ Y LI+G + ++ +A + M +RG+
Sbjct: 720 IADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGM 779
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
PS S L+ C G A+ + + G L +YKLL+ L G
Sbjct: 780 SPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKA 839
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCN---IGQLENAVLVMEE 502
++H + GY D ++ +I GL + + + +MEE
Sbjct: 840 VFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEE 881
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 160/382 (41%), Gaps = 13/382 (3%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D +Y+V + L + + + + +GV + + ++D + + G++ A
Sbjct: 470 LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAY 529
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+L R+ + ++ + NV++ LC+ + ASSL M V V+TY I+I
Sbjct: 530 SLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEM 589
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G +V +V+ G+ PD T++ + G +++ +V M E+G PD
Sbjct: 590 LKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDL 649
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +I Y +G + K M C+P++ + LI L ++ E
Sbjct: 650 VTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMK------ET 703
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ GI + + + + A+ +++K + GC + ++ Y L ++GF +
Sbjct: 704 RSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGAL---IAGFCQ 760
Query: 458 CGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
L + L H M+E G +IY ++ C +G AV +++ + G P
Sbjct: 761 QERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLES 820
Query: 515 YSKLSNKLLASNKLESAYNLFR 536
Y L L E A +F
Sbjct: 821 YKLLVCGLYIEGSNEKAKAVFH 842
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 148/351 (42%), Gaps = 41/351 (11%)
Query: 90 RAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVL- 148
R +++ LP V ++ L + +++A V L++ V VV L GE +
Sbjct: 534 RMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDG 593
Query: 149 FFNWAIKHPN------VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
F+ A+K N DV +Y + A + + + +V++ M +EG+ PDL T +
Sbjct: 594 AFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYT 653
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ-------RLHVGAAS-- 253
+++D + R G ++A L + D G K +++++ L R +G S
Sbjct: 654 VLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVS 713
Query: 254 --------------------SLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
LF M + +V Y +I+G+ + ++ E + ++
Sbjct: 714 NVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHH 773
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+ G SP ++ L++ + G +A+ + D M E G P +Y ++ G
Sbjct: 774 MKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGS 833
Query: 353 FDECMKYYKGMSSYNCEPNMD--TYTRLISGLLKSRKVADALEVFEEMLDR 401
++ + G+ S C N D + LI GLLK V + E+ + M ++
Sbjct: 834 NEKAKAVFHGLLS--CGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEK 882
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 106/289 (36%), Gaps = 41/289 (14%)
Query: 159 VAKDVKSYNVIVKALGR----RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF------ 208
+ D+ +Y V++ R + FDF L M G P L +SI++ +
Sbjct: 645 ILPDLVTYTVLIDGYARLGLTHRAFDF----LKCMVDTGCKPSLYIVSILIKNLSHENRM 700
Query: 209 -----------------IRAGQVYK------AIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
+ V+K A+++ ++ + G D ++ CQ
Sbjct: 701 KETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQ 760
Query: 246 RLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
+ + A L + MK + + + YN ++ KLG E R++ +V G P +
Sbjct: 761 QERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLES 820
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
+ L+ GL G + A VF + G D A+ +I + DEC + M
Sbjct: 821 YKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIME 880
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
+ D + L + ALE E RG+ + G +T
Sbjct: 881 EKDATAQADIACAALMRLAAANSTKGALEDHEL---RGLSVNHGELTQL 926
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 180/379 (47%), Gaps = 3/379 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ A G + NV M + GV PDL T +IV+ ++ R Q K + +
Sbjct: 234 TYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELM 293
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK---VLFNVMTYNIVISGWSKLG 281
+ ++ D +LN+V++CL + G A +FNSMK K +V+T+ +I +S G
Sbjct: 294 KGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCG 353
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
Q+ + ++AEG P+ ++++ LI G +A VF+ +K+ G PD +Y
Sbjct: 354 QIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYT 413
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++++ Y G ++ MK ++ M +C+PN+ +Y LI + +A+E+ EM
Sbjct: 414 SLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERN 473
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G+ P+ +I + L G + A G KL+ TAY + G+
Sbjct: 474 GVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKA 533
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L L+ M+ D Y +I+G C + + A+ ++E + S+ VYS +
Sbjct: 534 LSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICA 593
Query: 522 LLASNKLESAYNLFRKIKI 540
++ A ++F K+K+
Sbjct: 594 YSKQGQVTEAESMFTKMKM 612
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 176/405 (43%), Gaps = 9/405 (2%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
E V F W N YN++++ R D + +M K PD ET +
Sbjct: 143 EHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNA 202
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
++++ RAGQ A+ ++ + + + N ++ + A ++ M +
Sbjct: 203 LINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENG 262
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
V +++T+NIV+S + + Q ++ + + PD+ T + +I L + G+ AI
Sbjct: 263 VGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAI 322
Query: 323 EVFDTMKEK--GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
++F++MKEK C PD + +I Y G + C + M + +PN+ +Y LI
Sbjct: 323 DIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIG 382
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
+A VF E+ G P + TS L G P AM +++ R+ CK
Sbjct: 383 AYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKP 442
Query: 441 SLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
+L +Y L + +G G+L +++ HEM+ +G + ++A GQ
Sbjct: 443 NLVSYNAL---IDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIK 499
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
V+ + +G + Y+ L+ + + A +L+R ++ +
Sbjct: 500 SVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKK 544
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 171/406 (42%), Gaps = 9/406 (2%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
+ + +KG + D +L++V + + +G+A+ +F + K DV +
Sbjct: 289 YFELMKGTNIRPDTT-------TLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVT 341
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
+ I+ + + M EG+ P++ + + ++ ++ G +A + ++
Sbjct: 342 FTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIK 401
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVV 284
G D S +L + A +F M+ N+++YN +I + G +
Sbjct: 402 KNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLT 461
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E +L E+ G P+ ++ L+ GR G+ V + +G +T AYN+ I
Sbjct: 462 EAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAI 521
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+Y+SVG++D+ + Y+ M + +P+ TY LISG K K +AL +EM+D I
Sbjct: 522 GSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIP 581
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
S +S + G A M+ K + VGC+ + Y ++ L
Sbjct: 582 LSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASAL 641
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
+ EM+ D ++ N G VLV+ E +R+ P
Sbjct: 642 FLEMETDDVQPDSIACSSLMRAF-NKGGQPAKVLVLAEFMREKKIP 686
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 150/373 (40%), Gaps = 36/373 (9%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SYN ++ A G + +L +M + GV P++ ++ ++ + R GQ K +L
Sbjct: 446 SYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAA 505
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG------- 276
E G+K + + N + A SL+ +M+ K V + +TYN++ISG
Sbjct: 506 ELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKY 565
Query: 277 ----------------------------WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
+SK GQV E E + ++ G PD +T++ +
Sbjct: 566 GEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAM 625
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I A + A +F M+ PD+ A ++++ + G + + + M
Sbjct: 626 IHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKI 685
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
N ++ ++S R+ + + + + M V S G + L L G M
Sbjct: 686 PFNNSSFFEMVSACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMK 745
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++ K G +++ Y +LL+ L G +++ M+E+G +Y + +
Sbjct: 746 LFYKIVASGAEINFYTYSILLKNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRSISSFAQ 805
Query: 489 NIGQLENAVLVME 501
N E A ++ E
Sbjct: 806 NRSGAEYAAVIQE 818
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 114/274 (41%), Gaps = 40/274 (14%)
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMK-EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
F LI + + G ++ +++VF MK +K + YN +I + D+ + M
Sbjct: 129 FPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEM 188
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ C+P+ +TY LI+ ++ + A+ + ++ML I PS T + + S G
Sbjct: 189 QKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 248
Query: 424 HAAMMMYKKARKVGC-------KLSLTAYK----------------------------LL 448
A+ + KK + G + L+AYK ++
Sbjct: 249 KEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIV 308
Query: 449 LRRLSGFGKCGMLLDLWHEMQE---SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+ L G+ G +D+++ M+E YP D + +I GQ+EN L
Sbjct: 309 IYCLVKLGQNGKAIDIFNSMKEKRSECYP-DVVTFTTIIHLYSVCGQIENCQTAFNTMLA 367
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+G P+ + Y+ L + + A+++F +IK
Sbjct: 368 EGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIK 401
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 171/337 (50%), Gaps = 2/337 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV ++ ++V L + + FD M K+G+ P+L T + ++ +RAG++ A+++L
Sbjct: 366 DVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLL 425
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
G +E G++ A + N+ + + G A F MK K ++ N++ N + +++
Sbjct: 426 GTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEM 485
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ E + + + G +PDS+T++ +++ + G++D+A+ + M GC PD
Sbjct: 486 GRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVV 545
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N++I + G DE + + M P + TY L+SGL K +V A+E+FE M++
Sbjct: 546 NSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIE 605
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+ P+T + + L+ C A+ M+ K + CK + Y ++ L K
Sbjct: 606 KKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNH 665
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
+H++++S +P I ++ GL GQ+ +A+
Sbjct: 666 AFWFFHQLKKSMHPDHVTICT-LLPGLVKCGQIGDAI 701
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 181/377 (48%), Gaps = 1/377 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+K+Y+ ++ ALG+++ + + +L +M G+ P++ T +I + RAG++ +A ++
Sbjct: 227 LKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFR 286
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
R++D G D + V++ LC + A LF MK + + Y ++ ++ G
Sbjct: 287 RMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFG 346
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ + ++ A+G+ PD +TF+ L++ L +A D+A FD M+++G P+ + YN
Sbjct: 347 DLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYN 406
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I + G ++ +K M S +P TY I KS + A+E FE+M +
Sbjct: 407 TLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAK 466
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
GIVP+ + L L G A M+ R+ G Y ++++ S G+
Sbjct: 467 GIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEA 526
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
++L EM +G D + +I L G+++ A + + P+ + Y+ L +
Sbjct: 527 VNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSG 586
Query: 522 LLASNKLESAYNLFRKI 538
L +++ A LF +
Sbjct: 587 LGKEGRVQKAIELFESM 603
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 187/417 (44%), Gaps = 4/417 (0%)
Query: 124 NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMC 183
++D L + + RG L VL ++ + SYN ++ L + F
Sbjct: 156 DLDTYLTIFKALSIRGGLRQMTTVL---NKMRKAGFVLNAYSYNGLIHLLIQSGFCGEAL 212
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
V M EG+ P L+T S +M + + + +L +ED GL+ + + + + L
Sbjct: 213 EVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVL 272
Query: 244 CQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
+ + A +F M + +++TY ++I GQ+ + + ++ A G PD
Sbjct: 273 GRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQ 332
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+ + L++ G +D E + M+ G PD + ++ DFDE +
Sbjct: 333 VIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDV 392
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M PN+ TY LI GLL++ ++ DAL++ M G+ P+ T F++ G
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGE 452
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A+ ++K + G ++ A L L+ G+ +++ ++E+G D Y
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ +GQ++ AV ++ E +R G P +V + L + L + +++ A+ +F ++K
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMK 569
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 190/449 (42%), Gaps = 36/449 (8%)
Query: 135 VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
+V G MV+ ++ + +V ++ + ++ LGR D + M EG
Sbjct: 234 MVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGC 293
Query: 195 NPDLETLSIVMDSFIRAGQVYKA-------------------IQMLGRLEDFG------- 228
PDL T ++++D+ AGQ+ A I +L + DFG
Sbjct: 294 GPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKE 353
Query: 229 ---------LKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
D + +++ LC+ A + F+ M+ + +L N+ TYN +I G
Sbjct: 354 FWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLL 413
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
+ G++ + ++L + + G P + T++ I+ G++G A+E F+ MK KG P+
Sbjct: 414 RAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIV 473
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
A NA + + +G E + G+ P+ TY ++ K +V +A+ + EM
Sbjct: 474 ACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEM 533
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+ G P + S ++ L G A M+ + + + ++ Y LL L G+
Sbjct: 534 IRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRV 593
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
++L+ M E + + ++ C ++E A+ + + P L Y+ +
Sbjct: 594 QKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTV 653
Query: 519 SNKLLASNKLESAYNLFRKIKIARQNDYA 547
L+ NK+ A+ F ++K + D+
Sbjct: 654 IYGLIKENKVNHAFWFFHQLKKSMHPDHV 682
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 148/305 (48%), Gaps = 1/305 (0%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F+ K ++ + SYN ++ L + + ++ DM G PD T ++++
Sbjct: 775 FDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHG 834
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF-NSMKGKVLFNVM 268
++G++ + ++ + K DA + N+V+ L + ++ A F + +
Sbjct: 835 KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR 894
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TY +I G +K+G++ E R+ +E+ G P+ F+ LI G G+ G + A ++F M
Sbjct: 895 TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+G PD +Y ++ G DE + Y+ + S +P+ Y R+I+GL KS+++
Sbjct: 955 VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+AL ++ EM +RGIVP T S + L G A MY++ + G + + Y L
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNAL 1074
Query: 449 LRRLS 453
+R S
Sbjct: 1075 IRGYS 1079
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 145/318 (45%), Gaps = 7/318 (2%)
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVE 285
G+ S N ++ L + + A LF MK + T+N++++ K G++ E
Sbjct: 782 LGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITE 841
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+ + KE+++ PD++T++ +I L ++ +D A++ F + P Y +I
Sbjct: 842 LFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLID 901
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
VG +E M+ ++ MS Y C+PN + LI+G K A ++F+ M++ GI P
Sbjct: 902 GLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRP 961
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---L 462
+ T ++ LC G A+ + + + G AY R ++G GK + L
Sbjct: 962 DLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYN---RIINGLGKSQRMEEAL 1018
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
L++EM+ G D Y ++ L G +E A + EE G P Y+ L
Sbjct: 1019 ALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGY 1078
Query: 523 LASNKLESAYNLFRKIKI 540
S E AY +++ + +
Sbjct: 1079 SLSENPEHAYTVYKNMMV 1096
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 183/418 (43%), Gaps = 39/418 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI--- 218
DV +YN ++ L + + + K+ ++PD T+ ++ ++ GQ+ AI
Sbjct: 646 DVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIA 704
Query: 219 -----QMLGRL-----EDF--GLKFDAESLNVVLWC---------------------LCQ 245
Q+ R+ ED G +AE +++ LC+
Sbjct: 705 RDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCK 764
Query: 246 RLHVGAASSLFNSMKGKVLFN--VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
A +F+ K+ + + +YN +I ++ + + K++ G +PD+
Sbjct: 765 HKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAF 824
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
TF+ L+ G++G+I + E++ M + C PD YN VIS+ + D+ + ++ +
Sbjct: 825 TFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDL 884
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
S + P TY LI GL K ++ +A+ +FEEM D G P+ + G
Sbjct: 885 VSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDT 944
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A ++K+ G + L +Y +L+ L G+ L ++E++ +G D Y +
Sbjct: 945 ETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRI 1004
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
I GL ++E A+ + E +G P Y+ L L + +E A ++ ++++A
Sbjct: 1005 INGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLA 1062
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/461 (20%), Positives = 185/461 (40%), Gaps = 78/461 (16%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K ++ V +YN ++ LG+ + M ++ +P+ + + ++D F + +
Sbjct: 568 MKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDE 627
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
V A++M ++ K D + N V++ L + V A F+ +K + + +T +
Sbjct: 628 VELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTL 687
Query: 274 ISGWSKLGQV---------------------------------VEMERVL---KEIVAEG 297
+ G K GQ+ EM++ + +E+V G
Sbjct: 688 LPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNG 747
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK-------------------------- 331
+ L+ L + R A ++FD +K
Sbjct: 748 ICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKA 807
Query: 332 ----------GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
GC PD +N +++ + G E + YK M S C+P+ TY +IS
Sbjct: 808 WDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISS 867
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L KS + AL+ F +++ P+ T ++ L G AM ++++ GCK +
Sbjct: 868 LAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPN 927
Query: 442 LTAYKLLLRRLSGFGKCG---MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ +L ++G+GK G L+ M G D + Y ++ LC G+++ A+
Sbjct: 928 CAIFNIL---INGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALY 984
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
E G P + Y+++ N L S ++E A L+ +++
Sbjct: 985 YFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMR 1025
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 138/304 (45%), Gaps = 1/304 (0%)
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLK 291
E+ N +L L V +++F M+ K++ ++ TY + S G + +M VL
Sbjct: 122 TETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLN 181
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
++ GF ++ +++ LI L ++G +A+EV+ M +G P Y+A++
Sbjct: 182 KMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKR 241
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
D + M K M PN+ T+T I L ++ K+ +A E+F M D G P T T
Sbjct: 242 DSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYT 301
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
++ LC+ G A ++ K + G K Y LL + + FG + W +M+
Sbjct: 302 VLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEAD 361
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
GY D + ++ LC + A + ++G P+ Y+ L LL + ++E A
Sbjct: 362 GYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDA 421
Query: 532 YNLF 535
L
Sbjct: 422 LKLL 425
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 121/287 (42%), Gaps = 34/287 (11%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN+++ +L + D + D+ P T ++D + G++ +A+++
Sbjct: 857 DAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLF 916
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLG 281
+ D+G K N +NI+I+G+ K+G
Sbjct: 917 EEMSDYGCKP----------------------------------NCAIFNILINGYGKIG 942
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ K +V EG PD +++ L++ L AGR+D+A+ F+ +K G PD AYN
Sbjct: 943 DTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYN 1002
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I+ +E + Y M + P++ TY L+ L + V A ++EE+
Sbjct: 1003 RIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLA 1062
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
G+ P T + + P A +YK GC ++ Y L
Sbjct: 1063 GLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 64/152 (42%)
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
KV D VFE M + I T + + L G + K RK G L+ +Y
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+ L G CG L+++ M G + Y ++ L E +++++E
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P+ ++ L + K++ AY +FR++
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRM 288
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
L++ +K + D +YN I+ LG+ + + + ++M G+ PDL T + +M +
Sbjct: 983 LYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLN 1042
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVL 240
AG V +A +M L+ GL+ D + N ++
Sbjct: 1043 LGLAGMVEQAKRMYEELQLAGLEPDVFTYNALI 1075
>gi|449505615|ref|XP_004162522.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g73400, mitochondrial-like [Cucumis sativus]
Length = 559
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 190/402 (47%), Gaps = 12/402 (2%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E AL V V L+ D+V +++R + FF WA + N + + + YN ++ L
Sbjct: 103 MEGALDQVGVYLTTDLVADILHRLRFDEKLAFRFFTWAARQENYSHEPRVYNEMIDILSS 162
Query: 176 RKF----FDFMCNVLSDMAKEGVNP-DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLK 230
++ F +C++L M + N +E L ++ ++ + +Q + + +K
Sbjct: 163 TRYKVKQFRIVCDLLDYMKRNDKNTVPVEVLFGILRNY--TDKYLTCLQKFAKKKKVIVK 220
Query: 231 FDAE--SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMER 288
E + N++L LC+ V A +L +K K+ + TYNI+ GW ++ R
Sbjct: 221 RQPEINAFNLLLDALCKCSLVEDAEALLKKVKKKLKPDANTYNIMXFGWCRVRNPGRGMR 280
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG---PDTNAYNAVIS 345
VL+E++ GF PD+ T++ I +AG + +A E+F+ M+ KG P Y +I
Sbjct: 281 VLEEMIELGFDPDNFTYNTAIASFCKAGMLKEACELFEFMRTKGSALSSPTAKTYAIMIV 340
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
++ G +EC K+ + M C P++ TY +I G+ + KV +A EEM +G P
Sbjct: 341 ALVNNGRMEECFKFLEYMIKSGCLPDVSTYKEMIEGICVAGKVQEAYMFLEEMGKKGYPP 400
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
T FL+ LC A+ + +VGC S+ Y +L+ +W
Sbjct: 401 DIVTYNCFLKVLCDNKMSDDALRHCDRMIEVGCLPSVQTYNMLISMFFEMNDHNGAFQIW 460
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
EM G D + Y +I GL ++ +A L++EE + KG
Sbjct: 461 LEMDRYGCTRDVDSYCIMIEGLFGCNKVGDACLLLEEVVNKG 502
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 131/296 (44%), Gaps = 4/296 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN++ R + VL +M + G +PD T + + SF +AG + +A ++
Sbjct: 258 DANTYNIMXFGWCRVRNPGRGMRVLEEMIELGFDPDNFTYNTAIASFCKAGMLKEACELF 317
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN----SMKGKVLFNVMTYNIVISGW 277
+ G + + + ++ G F +K L +V TY +I G
Sbjct: 318 EFMRTKGSALSSPTAKTYAIMIVALVNNGRMEECFKFLEYMIKSGCLPDVSTYKEMIEGI 377
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
G+V E L+E+ +G+ PD +T++ ++ L DDA+ D M E GC P
Sbjct: 378 CVAGKVQEAYMFLEEMGKKGYPPDIVTYNCFLKVLCDNKMSDDALRHCDRMIEVGCLPSV 437
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +IS + + D + + + M Y C ++D+Y +I GL KV DA + EE
Sbjct: 438 QTYNMLISMFFEMNDHNGAFQIWLEMDRYGCTRDVDSYCIMIEGLFGCNKVGDACLLLEE 497
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
++++G+ SFL L G + + RK + + L +R+S
Sbjct: 498 VVNKGMKLPFRKFDSFLMQLSVNGNLKGIHRLSEHMRKFYNRAMARRFSLNQKRMS 553
>gi|222631252|gb|EEE63384.1| hypothetical protein OsJ_18196 [Oryza sativa Japonica Group]
Length = 378
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 167/349 (47%), Gaps = 1/349 (0%)
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
++ I + SF AG++ A+ + + G ES N +L L Q A+ +F+
Sbjct: 1 MDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFD 60
Query: 258 SMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
M+ + ++ +Y ++ W +VE RV E++ G PD + + +IEGL R R
Sbjct: 61 RMRDRYAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQR 120
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
+A+++F+ MK KG P+ Y +I ++ G D M+ ++ M C+P++ TYT
Sbjct: 121 RPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTC 180
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
L+ G ++++ + EEM +G P T + ++ L + P A +YKK K G
Sbjct: 181 LLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKG 240
Query: 438 CKLSLTAYKLLLRRLSGFGKCGML-LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
+ ++ Y ++++ G+ M+ +W EM G D Y I G G+ E A
Sbjct: 241 LEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEA 300
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQND 545
+EE ++KG ++ Y+K + + K + Y L +K+K + D
Sbjct: 301 CKYIEEMIQKGMKTPQIDYNKFAADFSKAGKPDILYELAQKVKFTGKFD 349
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 143/312 (45%), Gaps = 3/312 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V+S+N ++ AL + + N + D ++ PDL + + +M ++ A + +A ++
Sbjct: 36 VESFNCLLVALAQ-EGLGREANQVFDRMRDRYAPDLRSYTALMLAWCNARNLVEAGRVWN 94
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+ + GLK D N ++ L + A +F MK K NV TY ++I K G
Sbjct: 95 EMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRG 154
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ R +E+ G PD T++ L+ G G A R+D + + M +KGC PD YN
Sbjct: 155 KMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYN 214
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI-SGLLKSRKVADALEVFEEMLD 400
A+I + D+ + YK M EP + TY ++ S L R V+EEM
Sbjct: 215 ALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHR 274
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+GI P + T F+ +G P A ++ + G K Y S GK +
Sbjct: 275 KGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFSKAGKPDI 334
Query: 461 LLDLWHEMQESG 472
L +L +++ +G
Sbjct: 335 LYELAQKVKFTG 346
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 77/195 (39%), Gaps = 37/195 (18%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y ++ G K D + +L +M ++G PD G+ Y A+ L
Sbjct: 174 DVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPD--------------GRTYNALIKL 219
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
L R A+ ++ M K L + TYN+++ +
Sbjct: 220 ---------------------LTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLG 258
Query: 281 GQVVEME-RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G+ M V +E+ +G PD +++ I G R GR ++A + + M +KG
Sbjct: 259 GRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQID 318
Query: 340 YNAVISNYISVGDFD 354
YN +++ G D
Sbjct: 319 YNKFAADFSKAGKPD 333
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 179/362 (49%), Gaps = 1/362 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
NVA DV +YN I++ L VL ++ PD+ T +I++++ + V +A
Sbjct: 211 NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQA 270
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISG 276
+++L + + G K D + NV++ +C+ + A N+M NV+T+NI++
Sbjct: 271 MKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRS 330
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
G+ ++ E++L +++ +G SP +TF+ LI L R G + AI++ + M GC P+
Sbjct: 331 MCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPN 390
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+ +YN ++ + D ++Y M S C P++ TY L++ L K KV A+E+
Sbjct: 391 SLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 450
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
++ +G P T + ++ L G A+ + + R+ G K + Y L+ LS G
Sbjct: 451 QLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREG 510
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K + +H+++ G + Y ++ GLC Q + A+ + + K P+ Y+
Sbjct: 511 KVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYT 570
Query: 517 KL 518
L
Sbjct: 571 IL 572
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 171/356 (48%), Gaps = 4/356 (1%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V+ + + G PD+ T ++++ + ++G++ A+Q+L R+ + D + N +L LC
Sbjct: 171 VMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLC 227
Query: 245 QRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ A + + K + +V+TY I+I K V + ++L E+ +G PD +
Sbjct: 228 DSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVV 287
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T++ LI G+ + GR+D+AI+ + M GC P+ +N ++ + S G + + K M
Sbjct: 288 TYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDM 347
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
C P++ T+ LI+ L + + A+++ E+M G P++ + L C
Sbjct: 348 LRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKM 407
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+ GC + Y LL L GK + +++ +++ G Y V
Sbjct: 408 DRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTV 467
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I GL +G+ E A+ +++E RKG P + YS L + L K++ A F ++
Sbjct: 468 IDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLE 523
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 122/243 (50%), Gaps = 1/243 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V ++N+++ L R+ ++L M G P+ + + ++ F + ++ +AI+ L
Sbjct: 356 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 415
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM-TYNIVISGWSKLG 281
+ G D + N +L LC+ V A + N + K V+ TYN VI G SK+G
Sbjct: 416 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVG 475
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ ++L E+ +G PD +T+S L+ GL R G++D+AI+ F ++ G P+ YN
Sbjct: 476 KTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYN 535
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+++ D + + M S C+P TYT LI G+ +AL++ E+ R
Sbjct: 536 SIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSR 595
Query: 402 GIV 404
G+V
Sbjct: 596 GLV 598
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 3/260 (1%)
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ + + L+ +V G PD + + LI G R G+ A V + +++ G PD Y
Sbjct: 128 GELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITY 187
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +IS Y G+ D ++ M N P++ TY ++ L S K+ A+EV + L
Sbjct: 188 NVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 244
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+ P T T +E C AM + + R G K + Y +L+ + G+
Sbjct: 245 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 304
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ + M G + + ++ +C+ G+ +A ++ + LRKG PS + ++ L N
Sbjct: 305 AIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILIN 364
Query: 521 KLLASNKLESAYNLFRKIKI 540
L L A ++ K+ +
Sbjct: 365 FLCRQGLLGRAIDILEKMPM 384
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 96/224 (42%), Gaps = 3/224 (1%)
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
L R G ++D + ++M +G PD ++I + +G + + + P+
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+ TY LISG KS ++ +AL+V + M + P T + L LC G AM +
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ + C + Y +L+ G + L EM+ G D Y +I G+C G
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+L+ A+ + G P+ + ++ + + ++ + A L
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLL 344
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 180/388 (46%), Gaps = 14/388 (3%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V +YN ++ L R D V +M + PD T +I++ R+ Q+ KA ++L
Sbjct: 6 NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
GR+++ G D N ++ + G A M K L V+TY ++ G K
Sbjct: 66 GRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKA 125
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ + ++L E+ +G SP+ T++ ++EGL ++D+A ++ + M +G PD Y
Sbjct: 126 ERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTY 185
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N+ I DE K+ M P++ +YT +I+GL KS + A + + M +
Sbjct: 186 NSFIKGLCKCDRVDEARKFLARMPV---TPDVVSYTTVINGLCKSGDLDSASRMLDHMSN 242
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
RG P T +S ++ C G AM + K+GC+ ++ AY LL L G G
Sbjct: 243 RGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGK 302
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR-------- 512
D+ EM+ G+ D Y I GLC +++ A V + + +G P+
Sbjct: 303 AEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIV 362
Query: 513 --LVYSKLSNKLLASNKLESAYNLFRKI 538
L+Y+ L + L + + A LF K+
Sbjct: 363 DILLYTVLLDGLCKGGRFDEACALFSKV 390
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 151/306 (49%), Gaps = 13/306 (4%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V DV SY ++ L + D +L M+ G PD+ T S ++D F + G+V +A+
Sbjct: 210 VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAM 269
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+L + G + + + N +L L + H+G A + M+ + +V++YN I G
Sbjct: 270 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 329
Query: 278 SKLGQVVEMERVLKEIVAEGFSP----------DSLTFSFLIEGLGRAGRIDDAIEVFD- 326
K +V + + V +V G +P D L ++ L++GL + GR D+A +F
Sbjct: 330 CKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSK 389
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
+ EK C PD YN ++ ++ D+ ++ +K M NC N+ T+ L+ GL
Sbjct: 390 VLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDD 448
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+++DA + M+D G +P T + ++ +C G AA+ ++++A K GC + Y
Sbjct: 449 RLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYS 508
Query: 447 LLLRRL 452
L+ L
Sbjct: 509 ALITGL 514
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 107/467 (22%), Positives = 188/467 (40%), Gaps = 86/467 (18%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K D YN ++ + K F L++M K P + T + ++D +A +
Sbjct: 68 MKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAER 127
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
A+++L + D G + + NV++ LC+ + A + M + F +V+TYN
Sbjct: 128 TRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 187
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
I G K +V E + L + +PD ++++ +I GL ++G +D A + D M +G
Sbjct: 188 FIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRG 244
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL-------------- 378
C PD Y+++I + G+ + M M C PNM Y L
Sbjct: 245 CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAE 304
Query: 379 ---------------------ISGLLKSRKVADALEVFEEMLDRGIVPSTGTI------- 410
I GL K+ +V A VF+ M++RG P+ +
Sbjct: 305 DMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDI 364
Query: 411 ---TSFLEPLCSYGPPHAAMMMYKKA--RKVGCKLSLTAYKLLL---------------- 449
T L+ LC G A ++ K K+ C+ + Y ++L
Sbjct: 365 LLYTVLLDGLCKGGRFDEACALFSKVLDEKI-CEPDVFFYNVMLDSHCKRRQIDKALQIH 423
Query: 450 RRLSGFGKC----------GMLLD--------LWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+++ C G+ +D + M + G+ D Y ++ +C G
Sbjct: 424 KQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCG 483
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ A+ + EE+++ G P + YS L L+ N E AY LF K+
Sbjct: 484 KSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL 530
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 110/274 (40%), Gaps = 38/274 (13%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK------------------------- 331
G+ + T++ L+ L R R D A VF M +K
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 332 ----------GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
GC PD YNA+IS Y DF + K+ M +C P + TYT ++ G
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L K+ + DA+++ +EM D+G P+ T +E LC A M ++ G
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ Y ++ G KC + + + D Y VI GLC G L++A +++
Sbjct: 182 VVTYNSFIK---GLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLD 238
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+G P + YS L + ++E A L
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 272
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 134/291 (46%), Gaps = 27/291 (9%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PN+ +YN ++ AL R ++L +M + G PD+ + + +D +A +V K
Sbjct: 282 PNMV----AYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKK 337
Query: 217 AIQMLGRLEDFGLKFDAESLN----------VVLWCLCQRLHVGAASSLFNSMKGKVLF- 265
A + R+ + G +A S + V+L LC+ A +LF+ + + +
Sbjct: 338 AKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICE 397
Query: 266 -NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+V YN+++ K Q+ + ++ K+++ E + +T++ L+ GL R+ DA +
Sbjct: 398 PDVFFYNVMLDSHCKRRQIDKALQIHKQML-EKNCCNVVTWNILVHGLCVDDRLSDAETM 456
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
TM ++G PD Y ++ G ++ ++ C P++ TY+ LI+GL+
Sbjct: 457 LLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVH 516
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
+A +F ++++R VP T+ G H + + K RK
Sbjct: 517 ENMAEEAYLLFTKLVERRWVPDDKTL----------GLLHRKLKLLNKPRK 557
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 72/172 (41%)
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
E N+ TY +L+ L + + A VF+EM+D+ P T L LC A
Sbjct: 4 EHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARK 63
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ + +++GC Y L+ S G EM ++ Y ++ GLC
Sbjct: 64 LLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLC 123
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+ +AV +++E KG P+ Y+ + L KL+ A + ++ +
Sbjct: 124 KAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAV 175
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 195/398 (48%), Gaps = 3/398 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+VL + +K+ A ++ +Y ++ + + ++ M + + + SI
Sbjct: 192 EALVLI-DRMVKYGCEANEI-TYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSI 249
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
V+DS + G + A+ + +E G+K D + + ++ LC + + M G+
Sbjct: 250 VIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRN 309
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
++ NV+T++ +I + K G+++E + + E+VA G +PD++T+S LI+G + R+ +A
Sbjct: 310 IIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEAN 369
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
++ D M KGC P+ Y+ +I++Y D M+ + +SS + TY L+ G
Sbjct: 370 QMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGF 429
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+S K+ A E+F+EM+ RG+ PS T L+ LC G A+ +++K +K L +
Sbjct: 430 CQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGI 489
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y +++ + K L+ + G D Y +I GLC G L A ++ +
Sbjct: 490 GIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRK 549
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
G PS Y+ L L + + S+ L ++K+
Sbjct: 550 MKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKM 587
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 192/398 (48%), Gaps = 1/398 (0%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+VL F + + ++ + N+++ R++ F +V+ K G P+ T S ++
Sbjct: 87 LVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLI 146
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVL 264
+ F G+V +A+ ++ R+ + + + ++N ++ LC + V A L + M K
Sbjct: 147 NGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCE 206
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
N +TY V++ K G + +++ + +S +I+ L + G +DDA+ +
Sbjct: 207 ANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSL 266
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F+ M+ KG D AY+++I + G +D+ K + M N PN+ T++ LI +K
Sbjct: 267 FNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVK 326
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
K+ +A E++ EM+ RGI P T T +S ++ C A M GC+ ++
Sbjct: 327 EGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVT 386
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y +L+ + + L+ E+ G +D Y ++ G C G+L A + +E +
Sbjct: 387 YSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMV 446
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+G PS + Y L + L + +L+ A +F K++ +R
Sbjct: 447 SRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSR 484
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 186/373 (49%), Gaps = 9/373 (2%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
V+ + GNL +A+ LF +K + DV +Y+ I+ L +D +L +M
Sbjct: 250 VIDSLCKDGNLD-DALSLFNEMEMK--GIKADVVAYSSIIGGLCNDGRWDDGAKMLREMI 306
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+ P++ T S ++D F++ G++ +A ++ + G+ D + + ++ C+ +G
Sbjct: 307 GRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLG 366
Query: 251 AASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A+ + + M K N++TY+I+I+ + K +V R+ EI ++G D++T++ L+
Sbjct: 367 EANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLV 426
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
+G ++G+++ A E+F M +G P Y ++ G+ + ++ ++ M
Sbjct: 427 QGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMI 486
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
+ Y +I G+ + KV DA +F + +G+ P T + LC G A M+
Sbjct: 487 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADML 546
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGML--LDLWHEMQESGYPSDGEIYEYVIAGL 487
++K ++ GC S Y +L+R + G G++ ++L EM+ G+ +D + V+ L
Sbjct: 547 FRKMKEDGCAPSDCTYNILIR--AHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVML 604
Query: 488 CNIGQLENAVLVM 500
+ G+L+ L M
Sbjct: 605 SD-GRLDKTFLDM 616
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 109/257 (42%), Gaps = 35/257 (13%)
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS------------ 364
++++AI++F++M + P ++ + S ++D + + K M
Sbjct: 49 KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108
Query: 365 -SYNC----------------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
NC EPN T++ LI+G +V++A+ + + M++
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
P+ T+ + + LC G A+++ + K GC+ + Y +L R+ G +
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALA 228
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
LDL+ +M+E + Y VI LC G L++A+ + E KG + YS +
Sbjct: 229 LDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGG 288
Query: 522 LLASNKLESAYNLFRKI 538
L + + + R++
Sbjct: 289 LCNDGRWDDGAKMLREM 305
>gi|357442157|ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480404|gb|AES61607.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 200/430 (46%), Gaps = 7/430 (1%)
Query: 115 VIEDALWNVNVDLSLDVVGKVVNR---GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVK 171
++ +L + + LS +++ +V+ R G+ + + FF + + S + ++
Sbjct: 43 TLKQSLKSTQIFLSNELIDQVLKRVRFGHANPNQTLEFFRYTGRRKGFYHTAYSLDTMLY 102
Query: 172 ALGRRKFFDFMCNVLSDMAKEGVNP-DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLK 230
LGR + FD + +L + ++ N T+ +V+ + V + ++ + +
Sbjct: 103 ILGRSRMFDHVWELLIEARRKDQNVITPRTVMVVLGRVAKVCSVRQTVETFRKFKKIVPD 162
Query: 231 FDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVL 290
+ N +L LCQ + A ++++S+K N+ T+NI++SGW V + E +
Sbjct: 163 YGVNCFNALLRTLCQEKSMTDARNVYHSLKHNFRPNLQTFNILLSGWK---NVEDAELFV 219
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
E+ G PD +T++ L++ + I+ A +VFD M+EK PD Y +VI V
Sbjct: 220 NEMKEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLSPDVITYTSVIGGLGLV 279
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
G D+ K M Y P++ Y I ++++ A E+ +EM+++G+ P+ T
Sbjct: 280 GQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFELVDEMVNKGLSPNATTY 339
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
F ++ +YK+ GC + L+R K M L LW EM E
Sbjct: 340 NLFFRVFYWSNDLQSSWNLYKRMMGEGCLPYTQSCMFLIRLFKRHEKMEMALQLWGEMVE 399
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G+ S + + + LC++G+L A E + KG PS + + ++ + +NK E+
Sbjct: 400 KGFGSYTLVSDVLFDMLCDMGKLMEAEKCFLEMIEKGQRPSNVSFKRIKVLMELANKHEA 459
Query: 531 AYNLFRKIKI 540
NL +K+ I
Sbjct: 460 IQNLTQKMAI 469
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 146/334 (43%), Gaps = 7/334 (2%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +N +++ L + K NV + K P+L+T +I++ + V A +
Sbjct: 165 VNCFNALLRTLCQEKSMTDARNVYHSL-KHNFRPNLQTFNILLSGW---KNVEDAELFVN 220
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLG 281
+++ G++ D + N ++ C+ + A +F+ M+ K L +V+TY VI G +G
Sbjct: 221 EMKEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLSPDVITYTSVIGGLGLVG 280
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
Q + VLKE+ G PD ++ I A R+ A E+ D M KG P+ YN
Sbjct: 281 QPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFELVDEMVNKGLSPNATTYN 340
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+ D YK M C P + LI + K+ AL+++ EM+++
Sbjct: 341 LFFRVFYWSNDLQSSWNLYKRMMGEGCLPYTQSCMFLIRLFKRHEKMEMALQLWGEMVEK 400
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G T + LC G A + + + G + S ++K + + K +
Sbjct: 401 GFGSYTLVSDVLFDMLCDMGKLMEAEKCFLEMIEKGQRPSNVSFKRIKVLMELANKHEAI 460
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
+L +M G P +++E V + +G+L+N
Sbjct: 461 QNLTQKMAIFGRPL--QVHERVATPIGEMGELDN 492
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 192/415 (46%), Gaps = 38/415 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV--NPDLETLSIVMDSFIRAGQVYKAIQ 219
DV SY++++K+L + ++L MA+ G +P++ + V+D F + G V KA
Sbjct: 181 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACD 240
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
+ + G+ D + N V+ LC+ + A + M K VL N TYN +I G+S
Sbjct: 241 LFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS 300
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
GQ E RV KE+ PD +T S L+ L + G+I +A +VFDTM KG PD
Sbjct: 301 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 360
Query: 339 AYNAVISNYISVG-------------------DF----------------DECMKYYKGM 363
+YN +++ Y + G DF D+ M + M
Sbjct: 361 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 420
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ +P++ TY +I+ L + K+ DA+E F +M+D+G+ P ++ C++G
Sbjct: 421 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSL 480
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A + + G L + + ++ L G+ +++ G D +Y +
Sbjct: 481 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSML 540
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ G C +G++E A+ V + + G P+ +VY L N +++ +LFR++
Sbjct: 541 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREM 595
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 197/418 (47%), Gaps = 5/418 (1%)
Query: 125 VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCN 184
V LS+ ++G + G + EA +F A+K N DV SYN+++ + M +
Sbjct: 325 VTLSM-LMGSLCKYGKIK-EARDVFDTMAMKGQN--PDVFSYNIMLNGYATKGCLVDMTD 380
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ M +G+ PD T ++++ ++ G + KA+ + + D G+K D + V+ LC
Sbjct: 381 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 440
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ + A FN M + V + YN +I G+ G +++ + ++ EI+ G D +
Sbjct: 441 RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 500
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
FS +I L + GR+ DA +FD G PD Y+ ++ Y VG ++ ++ + M
Sbjct: 501 FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAM 560
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
S EPN+ Y L++G K ++ + L +F EML RGI PST + ++ L G
Sbjct: 561 VSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRT 620
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A + + + + G + + Y ++LR L + L+ E++ + +
Sbjct: 621 VPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 680
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
I G+ ++E A + R PS + YS + L+ +E A ++F ++ A
Sbjct: 681 IDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 738
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 183/382 (47%), Gaps = 3/382 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D+ +YN +V AL + + D L M + V P+ T + ++ + GQ +A+
Sbjct: 250 IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAV 309
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
++ + + D +L++++ LC+ + A +F++M KG+ +V +YNI+++G
Sbjct: 310 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP-DVFSYNIMLNG 368
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
++ G +V+M + ++ +G +PD TF+ LI+ G +D A+ +F+ M++ G PD
Sbjct: 369 YATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPD 428
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y VI+ +G D+ M+ + M P+ Y LI G + A E+
Sbjct: 429 VVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELIS 488
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
E+++ G+ +S + LC G A ++ VG Y +L+ G
Sbjct: 489 EIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVG 548
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K L ++ M +G + +Y ++ G C IG+++ + + E L++G PS ++YS
Sbjct: 549 KMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYS 608
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
+ + L + + A F ++
Sbjct: 609 IIIDGLFQAGRTVPAKVKFHEM 630
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 164/387 (42%), Gaps = 45/387 (11%)
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF---------------------- 231
++P T +I+MD RA + A+ G+L GL+
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166
Query: 232 --------------DAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLF-NVMTYNIVI 274
D S +++L LC + G A L M G V NV+ YN VI
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ K G V + + KE+V G PD +T++ ++ L +A +D A M K
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 286
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ YN +I Y S G + E ++ +K M ++ P++ T + L+ L K K+ +A +V
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F+ M +G P + L + G ++ G + +L++
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK---A 403
Query: 455 FGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
+ CGML + +++EM++ G D Y VIA LC IG++++A+ + + +G P
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 463
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y+ L L A L +I
Sbjct: 464 KYAYNCLIQGFCTHGSLLKAKELISEI 490
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 158/364 (43%), Gaps = 45/364 (12%)
Query: 112 GKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVK 171
G G+ D + NV ++ N G L +AM++F N H V DV +Y ++
Sbjct: 387 GDGIAPD-FYTFNV-----LIKAYANCGMLD-KAMIIF-NEMRDH-GVKPDVVTYRTVIA 437
Query: 172 ALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF 231
AL R D + M +GV PD + ++ F G + KA +++ + + G+
Sbjct: 438 ALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHL 497
Query: 232 DAESLNVVLWCLCQRLHVGAASSLFNS----------------MKGKVLF---------- 265
D + ++ LC+ V A ++F+ M G L
Sbjct: 498 DIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVF 557
Query: 266 ----------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
NV+ Y +++G+ K+G++ E + +E++ G P ++ +S +I+GL +A
Sbjct: 558 DAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQA 617
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
GR A F M E G D YN V+ FDE + +K + + N + N+ T
Sbjct: 618 GRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL 677
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
+I G+ ++R+V +A ++F + +VPS T + + L G A M+ +
Sbjct: 678 NTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQN 737
Query: 436 VGCK 439
GC+
Sbjct: 738 AGCE 741
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 89/193 (46%), Gaps = 1/193 (0%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
A+ + +V Y +V + D ++ +M + G+ P SI++D +AG
Sbjct: 559 AMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAG 618
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYN 271
+ A + + G+ D + N+VL L + A LF ++ V N++T N
Sbjct: 619 RTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLN 678
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I G + +V E + + I P +T+S +I L + G +++A ++F +M+
Sbjct: 679 TMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 738
Query: 332 GCGPDTNAYNAVI 344
GC P++ N V+
Sbjct: 739 GCEPNSRLLNHVV 751
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 96/208 (46%), Gaps = 1/208 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V M G+ P++ +++ + + G++ + + + + G+K ++++ L
Sbjct: 556 VFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLF 615
Query: 245 QRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
Q A F+ M + + ++ TYNIV+ G K E + KE+ A + +
Sbjct: 616 QAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINII 675
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T + +I+G+ + R+++A ++F ++ P Y+ +I+N I G +E + M
Sbjct: 676 TLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSM 735
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADA 391
+ CEPN ++ LLK ++ A
Sbjct: 736 QNAGCEPNSRLLNHVVRELLKKNEIVRA 763
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 19/400 (4%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
NL + + FFNW P +V SY+ ++ L R + + M K + +E
Sbjct: 78 NLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCS--IE 135
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF-NS 258
+ V+ +V++ + G +F K N +L L + L + +++
Sbjct: 136 DVLFVL-------EVFRKMNADG---EFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLEL 185
Query: 259 MKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+ ++ N+ T+N +++G+ K+G VVE E +IV G PD+ T++ LI G R +
Sbjct: 186 LNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGV 245
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
D+A EVF M +KGC + +Y +I G +E +K + M+ NC P + TYT L
Sbjct: 246 DNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVL 305
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I L S + +AL +F EM ++G P+ T T ++ LC A M + + G
Sbjct: 306 IYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGL 365
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWH---EMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
S+ Y L + G+ K GM+ D + M+ + + Y +I GLC ++
Sbjct: 366 IPSVVTYNAL---IDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHK 422
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
A+ ++ + L + PS + Y+ L + N LESAY L
Sbjct: 423 AMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL 462
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 182/389 (46%), Gaps = 3/389 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ LF +K +V +Y V++ L + D +LS+M+++G+ P + T +
Sbjct: 317 EALNLFNE--MKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNA 374
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
++D + + G + A ++L +E + + N ++ LC++ V A +L N M + K
Sbjct: 375 LIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK 434
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ +++TYN +I G K+ + R+L + G PD T+S I+ L + GR+++A
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAG 494
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+FD++K KG + Y A+I Y VG D + M + C PN TY LI GL
Sbjct: 495 TLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K +K+ +A + +ML G+ P+ T T + + G A+ ++ +G + +
Sbjct: 555 CKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDV 614
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L G + D+ +M E G D Y +I G +G A ++
Sbjct: 615 CTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKC 674
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESA 531
+ G PS + S L L N+++
Sbjct: 675 MVDTGCKPSLYIVSILIKNLSHENRMKET 703
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 170/392 (43%), Gaps = 6/392 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HP D +Y ++ R K D V M ++G + + + ++ AG++
Sbjct: 226 HP----DTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRIN 281
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
+A+++ + + + V+++ L A +LFN MK K NV TY ++I
Sbjct: 282 EALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLI 341
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G K ++ E ++L E+ +G P +T++ LI+G + G IDDA E+ D M+ CG
Sbjct: 342 DGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCG 401
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+T YN +I + M M P++ TY LI G K + A +
Sbjct: 402 PNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRL 461
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
M + G+VP T + F++ LC G A ++ + G K + Y L+
Sbjct: 462 LSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCK 521
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK + L M + Y +I GLC +++ A ++ + L G P+ +
Sbjct: 522 VGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVT 581
Query: 515 YSKLSNKLLASNKLESAYNLFRK-IKIARQND 545
Y+ L ++L + A +F + + Q D
Sbjct: 582 YTILIGEMLKDGAFDHALKVFNHMVSLGYQPD 613
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 161/353 (45%), Gaps = 1/353 (0%)
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
S + + G++PD T + ++ R V A ++ + G + + S ++ LC+
Sbjct: 218 SKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEA 277
Query: 247 LHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
+ A LF M + V TY ++I S G+ VE + E+ +G P+ T+
Sbjct: 278 GRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTY 337
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LI+GL + ++D+A ++ M EKG P YNA+I Y G D+ + M S
Sbjct: 338 TVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMES 397
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
+C PN TY LI GL K RKV A+ + +ML+R + PS T S + C +
Sbjct: 398 NSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLES 457
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A + + G Y + + L G+ L+ ++ G ++ IY +I
Sbjct: 458 AYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALID 517
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G C +G+++ A ++E L P+ Y+ L L K++ A +L K+
Sbjct: 518 GYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKM 570
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/445 (21%), Positives = 180/445 (40%), Gaps = 55/445 (12%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+ ++YN ++ L +++ +L+ M + ++P L T + ++ + + A ++L
Sbjct: 403 NTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL 462
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ + GL D + +V + LC+ V A +LF+S+K K V N + Y +I G+ K+
Sbjct: 463 SLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKV 522
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ +L+ ++ + P+S T++ LIEGL + ++ +A + M G P Y
Sbjct: 523 GKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTY 582
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+I + G FD +K + M S +P++ TYT + + + +V +M +
Sbjct: 583 TILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNE 642
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL------------------ 442
GI+P T T ++ G H A K GCK SL
Sbjct: 643 EGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKE 702
Query: 443 -------------TAYKLLLRRLSGFGKCGMLLD----------------------LWHE 467
Y++ L+ + G +D L H
Sbjct: 703 TRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHH 762
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
M+E G +IY ++ C +G AV +++ + G P Y L L
Sbjct: 763 MKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGS 822
Query: 528 LESAYNLFRKIKIARQNDYARRLWR 552
E A +F + ++ +Y W+
Sbjct: 823 NEKAKAVFHGL-LSCGYNYDEVAWK 846
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 163/375 (43%), Gaps = 1/375 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SY ++ L + + +DM ++ P + T ++++ + +G+ +A+ + +
Sbjct: 266 SYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEM 325
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
++ G + + + V++ LC+ + A + + M K L +V+TYN +I G+ K G +
Sbjct: 326 KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMI 385
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ +L + + P++ T++ LI GL + ++ A+ + + M E+ P YN++
Sbjct: 386 DDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSL 445
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I V D + + M+ P+ TY+ I L K +V +A +F+ + +G+
Sbjct: 446 IHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGV 505
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+ T+ ++ C G A + ++ C + Y +L+ L K
Sbjct: 506 KANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASS 565
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L +M G Y +I + G ++A+ V + G+ P Y+ +
Sbjct: 566 LVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYF 625
Query: 524 ASNKLESAYNLFRKI 538
+ LE ++ K+
Sbjct: 626 SQGMLEEVDDVIAKM 640
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 153/375 (40%), Gaps = 58/375 (15%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YNV+++ L + K ++++ M GV P + T +I++ ++ G A+++ +
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVV 284
G + D V TY + + G +
Sbjct: 606 VSLGYQPD----------------------------------VCTYTAFLHAYFSQGMLE 631
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E++ V+ ++ EG PD +T++ LI+G R G A + M + GC P + +I
Sbjct: 632 EVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILI 691
Query: 345 SNYI----------SVG--------DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
N +G +++ +K ++ M + C ++ Y LI+G +
Sbjct: 692 KNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQE 751
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
++ +A + M +RG+ PS S L+ C G A+ + + G L +YK
Sbjct: 752 RLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYK 811
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN---IGQLENAVLVMEES 503
LL+ L G ++H + GY D ++ +I GL + + + +MEE
Sbjct: 812 LLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEE- 870
Query: 504 LRKGFCPSRLVYSKL 518
KG P+ L YS L
Sbjct: 871 --KGCQPNPLTYSLL 883
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 156/356 (43%), Gaps = 30/356 (8%)
Query: 90 RAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVL- 148
R +++ LP V ++ L + +++A V L++ V VV L GE +
Sbjct: 534 RMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDG 593
Query: 149 FFNWAIKHPN------VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
F+ A+K N DV +Y + A + + + +V++ M +EG+ PDL T +
Sbjct: 594 AFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYT 653
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ-------RLHVGAAS-- 253
+++D + R G ++A L + D G K +++++ L R +G S
Sbjct: 654 VLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVS 713
Query: 254 ---------SLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
LF M + +V Y +I+G+ + ++ E + ++ + G SP
Sbjct: 714 NTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSED 773
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
++ L++ + G +A+ + D M E G P +Y ++ G ++ + G+
Sbjct: 774 IYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGL 833
Query: 364 SSYNCEPNMD--TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
S C N D + LI GLLK V + E+ + M ++G P+ T + +E L
Sbjct: 834 LS--CGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 81/177 (45%), Gaps = 2/177 (1%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
L E + F ++H DV Y ++ +++ + ++ M + G++P +
Sbjct: 715 TLEYEIALKLFEKMVEH-GCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSED 773
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
+ ++D + G +A++++ + + GL ES +++ L A ++F+ +
Sbjct: 774 IYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGL 833
Query: 260 -KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
++ + + ++I G K V E ++ + +G P+ LT+S LIEGL R
Sbjct: 834 LSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLERT 890
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 182/387 (47%), Gaps = 14/387 (3%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YNV++ A +R + C+++ M ++G PD+ T + VMD ++ +V +A+ + +
Sbjct: 395 TYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM 454
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHV------GAASSLFNSMK-----GKVLFNVMTYNIV 273
E G + S N ++ LCQ+ + G F +K G V +V+TY+ +
Sbjct: 455 ERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVP-DVVTYSTL 513
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
ISG + +V + +L+++V P +T + LI GL +AGRI +A EV D M G
Sbjct: 514 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 573
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
PD YN ++ + G + + M + PN+ TYT L+SGL K+ ++ +A
Sbjct: 574 SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACG 633
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
VF +M G P+ T T+ + CS G + ++ + G Y L L
Sbjct: 634 VFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELC 693
Query: 454 GFGKCGMLLDLWHEMQESGYPS--DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
G+ L++ E +ES E+Y + + GL G++E A+ + + +R G P+
Sbjct: 694 KSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPA 753
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
+ L L S + A + +I
Sbjct: 754 PERCASLVAGLCKSGQGGEARAVLEEI 780
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 178/396 (44%), Gaps = 14/396 (3%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H V +Y ++ L FD + +DM + G P T ++++D+ + G +
Sbjct: 351 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLE 410
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVI 274
+A ++ ++ + G D + N V+ LC+ V A LFN M+ N ++N +I
Sbjct: 411 EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTII 470
Query: 275 SG---WSKL------GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
G SK+ G++ E R+LK + +G PD +T+S LI GL R+DDA +
Sbjct: 471 LGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLL 530
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ M ++ C P N +I G E + M S P++ TY L+ G ++
Sbjct: 531 EDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRA 590
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+ A E+ +M+ RG+ P+ T T+ + LC A ++ + + GC +L Y
Sbjct: 591 GQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTY 650
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM---EE 502
L+ G+ L L+ EM +G D +Y + A LC G+ A+ ++ E
Sbjct: 651 TALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE 710
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
SLR VY + LL + K+E A R +
Sbjct: 711 SLRSEAWGDE-VYRFAVDGLLEAGKMEMALGFVRDM 745
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 177/387 (45%), Gaps = 45/387 (11%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
++ YN+++ L + D + M + V+PD + I++D +AG++ A +
Sbjct: 288 LRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQ 347
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+L G+ + ++ LC A LF M + + +TYN++I K G
Sbjct: 348 KLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRG 407
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ E ++K+++ +G PD +T++ +++GL ++ R+++A+ +F+ M+ GC P+ ++N
Sbjct: 408 MLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHN 467
Query: 342 AV---------ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
+ I G DE + K M+ P++ TY+ LISGL +V DA
Sbjct: 468 TIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDAR 527
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+ E+M+ R P+ T + + LC G K+AR+V
Sbjct: 528 HLLEDMVKRQCKPTVVTQNTLIHGLCKAG-------RIKEAREV---------------- 564
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
LD M SG D Y ++ G C GQ E A ++ + + +G P+
Sbjct: 565 ---------LD---AMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNV 612
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKIK 539
+ Y+ L + L +N+L A +F ++K
Sbjct: 613 VTYTALVSGLCKANRLPEACGVFAQMK 639
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 171/357 (47%), Gaps = 16/357 (4%)
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
P L TL+++++ F GQV KA ++L + D D S VL LC+ V A
Sbjct: 209 EPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVR 268
Query: 255 LFNSMK-------GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
LF + ++ YNIVI G + ++ E ++ +++ SPDS ++
Sbjct: 269 LFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGI 328
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI+GL +AG+++DA +F + G P T AY ++I FD+ + + M+
Sbjct: 329 LIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG 388
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
C P+ TY +I K + +A ++ ++M++ G VP T + ++ LC A+
Sbjct: 389 CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEAL 448
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRL---------SGFGKCGMLLDLWHEMQESGYPSDGE 478
+++ + ++GC + ++ ++ L GK L M + G+ D
Sbjct: 449 LLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVV 508
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
Y +I+GLC+I ++++A ++E+ +++ P+ + + L + L + +++ A +
Sbjct: 509 TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVL 565
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 186/436 (42%), Gaps = 70/436 (16%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA----IQML 221
YNV++ +L +R+ + + ++ M G PD T + ++ +AG++ +A +M
Sbjct: 47 YNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMR 106
Query: 222 GRL------------EDFGLKFDAE---------------SLNVVLWCLCQRLHVGAASS 254
R+ + L+ E + N+V+ LC+ V A
Sbjct: 107 SRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALE 166
Query: 255 LFNSMKGK-----------VLFNVM----------------------TYNIVISGWSKLG 281
L +M K VL +M T N+++ G+ G
Sbjct: 167 LARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRG 226
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK------EKGCGP 335
QV + +L+ + E +PD +++ +++GL +AGR+++A+ +F + P
Sbjct: 227 QVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPP 286
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
YN VI DE ++ ++ M+ N P+ +Y LI GL K+ K+ DA +F
Sbjct: 287 SLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLF 346
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
+++L G+ PST TS + LC A ++ + GC S Y +++
Sbjct: 347 QKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKR 406
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
G DL +M E G+ D Y V+ GLC ++E A+L+ E R G P+R +
Sbjct: 407 GMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSH 466
Query: 516 SKLSNKLLASNKLESA 531
+ + L +K++ A
Sbjct: 467 NTIILGLCQQSKIDQA 482
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 110/243 (45%), Gaps = 7/243 (2%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V + N ++ L + VL M G +PD+ T + ++ RAGQ +A ++L
Sbjct: 542 VVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLS 601
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+ GL + + ++ LC+ + A +F MK N+ TY +I G+ G
Sbjct: 602 DMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAG 661
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF----DTMKEKGCGPDT 337
QV ++ E+V G SPD + + L L ++GR A+E+ ++++ + G +
Sbjct: 662 QVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV 721
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y + + G + + + + M P + L++GL KS + +A V EE
Sbjct: 722 --YRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEE 779
Query: 398 MLD 400
++D
Sbjct: 780 IMD 782
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 7/229 (3%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
YN++I SK + ++++++ +V G PDS TF+ ++ GL +AG++D+A V D M
Sbjct: 46 VYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEM 105
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ + P + + G + + + M N Y ++ L K+ +V
Sbjct: 106 RSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPV----ANSSAYNIVVVALCKAARV 161
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
DALE+ M ++ I + G++ S L L G A+ +Y++ R+ C ++L +L
Sbjct: 162 DDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLN---VL 218
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
L G+ +L M + D Y V+ GLC G++E AV
Sbjct: 219 LEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAV 267
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 110/244 (45%), Gaps = 10/244 (4%)
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC-GPDTNAYNAVISNYISVGDFD 354
+G P L F+ +I+G GR +A+++F M+E C P + YN +I + + +
Sbjct: 4 QGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEE--CHSPYPDVYNVLIDSLSKRQETE 61
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
K + M C P+ T+T ++ GL K+ K+ +A V +EM R I P T +
Sbjct: 62 AVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLA 121
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
LC G A + ++ + +AY +++ L + L+L M E P
Sbjct: 122 HELCLRGSMERAFQLL----EIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIP 177
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
+ V+ GL + G+++ A+ V E+ R+ P + + L + +++ A L
Sbjct: 178 LAAGSLDSVLVGLMDSGRIDEALQVYRENRRE---PCLVTLNVLLEGFCSRGQVDKAREL 234
Query: 535 FRKI 538
R +
Sbjct: 235 LRAM 238
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M +GI P+ TS ++ C+ G A+ ++ + Y +L+ LS +
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYP-DVYNVLIDSLSKRQE 59
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+ + M + G D + ++ GLC G+++ A LVM+E + P S
Sbjct: 60 TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119
Query: 518 LSNKLLASNKLESAYNLFRKIKIARQNDY 546
L+++L +E A+ L + +A + Y
Sbjct: 120 LAHELCLRGSMERAFQLLEIMPVANSSAY 148
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 180/379 (47%), Gaps = 3/379 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ A G + NV M + GV PDL T +IV+ ++ R Q K + +
Sbjct: 234 TYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELM 293
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK---VLFNVMTYNIVISGWSKLG 281
+ ++ D +LN+V++CL + G A +FNSMK K +V+T+ +I +S G
Sbjct: 294 KGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCG 353
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
Q+ + ++AEG P+ ++++ LI G +A VF+ +K+ G PD +Y
Sbjct: 354 QIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYT 413
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++++ Y G ++ MK ++ M +C+PN+ +Y LI + +A+E+ EM
Sbjct: 414 SLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERN 473
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G+ P+ +I + L G + A G KL+ TAY + G+
Sbjct: 474 GVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKA 533
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L L+ M+ D Y +I+G C + + A+ ++E + S+ VYS +
Sbjct: 534 LSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICA 593
Query: 522 LLASNKLESAYNLFRKIKI 540
++ A ++F K+K+
Sbjct: 594 YSKQGQVTEAESMFTKMKM 612
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 176/405 (43%), Gaps = 9/405 (2%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
E V F W N YN++++ R D + +M K PD ET +
Sbjct: 143 EHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAETYNA 202
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
++++ RAGQ A+ ++ + + + N ++ + A ++ M +
Sbjct: 203 LINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENG 262
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
V +++T+NIV+S + + Q ++ + + PD+ T + +I L + G+ AI
Sbjct: 263 VGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAI 322
Query: 323 EVFDTMKEK--GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
++F++MKEK C PD + +I Y G + C + M + +PN+ +Y LI
Sbjct: 323 DIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIG 382
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
+A VF E+ G P + TS L G P AM +++ R+ CK
Sbjct: 383 AYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKP 442
Query: 441 SLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
+L +Y L + +G G+L +++ HEM+ +G + ++A GQ
Sbjct: 443 NLVSYNAL---IDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIK 499
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
V+ + +G + Y+ L+ + + A +L+R ++ +
Sbjct: 500 SVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKK 544
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 171/406 (42%), Gaps = 9/406 (2%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
+ + +KG + D +L++V + + +G+A+ +F + K DV +
Sbjct: 289 YFELMKGTNIRPDTT-------TLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVT 341
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
+ I+ + + M EG+ P++ + + ++ ++ G +A + ++
Sbjct: 342 FTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIK 401
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVV 284
G D S +L + A +F M+ N+++YN +I + G +
Sbjct: 402 KNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLT 461
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E +L E+ G P+ ++ L+ GR G+ V + +G +T AYN+ I
Sbjct: 462 EAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAI 521
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+Y+SVG++D+ + Y+ M + +P+ TY LISG K K +AL +EM+D I
Sbjct: 522 GSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIP 581
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
S +S + G A M+ K + VGC+ + Y ++ L
Sbjct: 582 LSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASAL 641
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
+ EM+ D ++ N G VLV+ E +R+ P
Sbjct: 642 FLEMETDDVQPDSIACSSLMRAF-NKGGQPAKVLVLAEFMREKKIP 686
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 166/402 (41%), Gaps = 39/402 (9%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SYN ++ A G + +L +M + GV P++ ++ ++ + R GQ K +L
Sbjct: 446 SYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAA 505
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG------- 276
E G+K + + N + A SL+ +M+ K V + +TYN++ISG
Sbjct: 506 ELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKY 565
Query: 277 ----------------------------WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
+SK GQV E E + ++ G PD +T++ +
Sbjct: 566 GEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAM 625
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I A + A +F M+ PD+ A ++++ + G + + + M
Sbjct: 626 IHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKI 685
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
N ++ ++S R+ + + + + M V S G + L L G M
Sbjct: 686 PFNNSSFFEMVSACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMK 745
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++ K G +++ Y +LL+ L G +++ M+E+G +Y + +
Sbjct: 746 LFYKIVASGAEINFYTYSILLKNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRSISSFAQ 805
Query: 489 NIGQLENAVLVME--ESLRKGFCPSRLVYSKLSNKLLASNKL 528
N E A ++ E ESL++ ++ KL++ LL ++ L
Sbjct: 806 NRSGAEYAAVIQERIESLKRN-SRNQNPTKKLNDSLLPASSL 846
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 114/274 (41%), Gaps = 40/274 (14%)
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMK-EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
F LI + + G ++ +++VF MK +K + YN +I + D+ + M
Sbjct: 129 FPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEM 188
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ C+P+ +TY LI+ ++ + A+ + ++ML I PS T + + S G
Sbjct: 189 QKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 248
Query: 424 HAAMMMYKKARKVGC-------KLSLTAYK----------------------------LL 448
A+ + KK + G + L+AYK ++
Sbjct: 249 KEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIV 308
Query: 449 LRRLSGFGKCGMLLDLWHEMQE---SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+ L G+ G +D+++ M+E YP D + +I GQ+EN L
Sbjct: 309 IYCLVKLGQNGKAIDIFNSMKEKRSECYP-DVVTFTTIIHLYSVCGQIENCQTAFNTMLA 367
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+G P+ + Y+ L + + A+++F +IK
Sbjct: 368 EGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIK 401
>gi|224081016|ref|XP_002306265.1| predicted protein [Populus trichocarpa]
gi|222855714|gb|EEE93261.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 181/390 (46%), Gaps = 20/390 (5%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN+++ L + + FD ++ +M + V P ET +++ + AG +AI+ +
Sbjct: 142 TYNLMIDILAKVRQFDVCWQLIVEMDQRNVKPTSETFFVLIRRLVAAGLTRQAIRAFDDM 201
Query: 225 EDFGLKFDAESLNVVLWC-----LCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSK 279
E F +E +N +C LC+ +V +FN K + NV Y ++I GW K
Sbjct: 202 ESFV----SEPVNETHFCFLLDTLCKYGYVKVGVEIFNKRKHRFSPNVKMYTVLIYGWCK 257
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD----------AIEVFDTMK 329
+G++ ER LKE G +T++ L+ G+ R + A +FD M+
Sbjct: 258 IGRIDMAERFLKETGERGIEATVVTYNVLLNGICRRASLHPESRFERTITLAENLFDEMR 317
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
E+G PD +++ V+ Y + + K M P++ TYT ++ L ++
Sbjct: 318 ERGIEPDVTSFSIVLHVYSRAHKPELTLDKLKLMKEKGICPSVVTYTSVVKCLCSCGRIE 377
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC-KLSLTAYKLL 448
DA E+ EM+ G+ + T F + +A+ +YKK R+ G L L +Y +L
Sbjct: 378 DAEELLGEMVRNGVSRTAVTYNCFFKEYMGRKDAESALKLYKKMREDGLGSLGLHSYNIL 437
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
LR + ++ ++W +++ SG D + Y +I GLC + A E + KG
Sbjct: 438 LRMFMMLNRLDIVNEIWEDLKSSGLGPDLDSYTMLIHGLCEKEKWREACKFFVEMIEKGL 497
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P ++ + L L+ S+ L + L +K+
Sbjct: 498 LPQKVTFETLYKGLIQSDMLRTWRRLKKKL 527
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 120/282 (42%), Gaps = 10/282 (3%)
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TYN++I +K+ Q +++ E+ P S TF LI L AG AI FD
Sbjct: 141 VTYNLMIDILAKVRQFDVCWQLIVEMDQRNVKPTSETFFVLIRRLVAAGLTRQAIRAFDD 200
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M+ P + + + + + + + PN+ YT LI G K +
Sbjct: 201 MESFVSEPVNETHFCFLLDTLCKYGYVKVGVEIFNKRKHRFSPNVKMYTVLIYGWCKIGR 260
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA----------AMMMYKKARKVG 437
+ A +E +RGI + T L +C H A ++ + R+ G
Sbjct: 261 IDMAERFLKETGERGIEATVVTYNVLLNGICRRASLHPESRFERTITLAENLFDEMRERG 320
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
+ +T++ ++L S K + LD M+E G Y V+ LC+ G++E+A
Sbjct: 321 IEPDVTSFSIVLHVYSRAHKPELTLDKLKLMKEKGICPSVVTYTSVVKCLCSCGRIEDAE 380
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ E +R G + + Y+ + + ESA L++K++
Sbjct: 381 ELLGEMVRNGVSRTAVTYNCFFKEYMGRKDAESALKLYKKMR 422
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 185/396 (46%), Gaps = 17/396 (4%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI- 218
+ ++ +YN ++K L + M K G PD+ T ++ G + A+
Sbjct: 136 SPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALK 195
Query: 219 ---QMLGRLEDFGL--KFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-------- 265
+ML + + + K + + N+++ LC+ A LF MK + +
Sbjct: 196 LHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQG 255
Query: 266 ---NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+++T+N++I K G+V+E +++L ++ G PD +T++ LIEG G ++ A
Sbjct: 256 LQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAR 315
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
E+F +M KGC PD +YN +I+ Y +E MK Y M PN+ TY L+ G+
Sbjct: 316 ELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGI 375
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+ KV DA ++F M GI ++ T FL+ LC AM ++ + + KL +
Sbjct: 376 FLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEI 435
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
L+ L GK +L+ ++ G+ + Y +I G C GQ++ A +++++
Sbjct: 436 ENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQK 495
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P + Y+ L SNKLE L ++
Sbjct: 496 MEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRM 531
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 166/331 (50%), Gaps = 11/331 (3%)
Query: 158 NVAKDVKSYNVIVKAL---GR----RKFFDFMCN---VLSDMAKEGVNPDLETLSIVMDS 207
N +V +YN+IV L GR ++ F+ M + ++M +G+ PD+ T ++++D+
Sbjct: 210 NCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDT 269
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFN 266
+ G+V +A ++LG + + G+ D + N ++ C + +A LF SM K +
Sbjct: 270 LCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPD 329
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V++YN++I+G+SK +V E ++ E++ G P+ +T+ L++G+ AG++DDA ++F
Sbjct: 330 VISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFS 389
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
MK G ++ Y + E MK + + S N + ++ LI GL K+
Sbjct: 390 VMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAG 449
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
K+ A E+FE++ + G P+ T T + C G A ++ +K GC + Y
Sbjct: 450 KLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYN 509
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
L+R K ++ L H M + D
Sbjct: 510 TLMRGFYESNKLEEVVQLLHRMAQKDVSPDA 540
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 164/369 (44%), Gaps = 19/369 (5%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC--QR 246
M + P L + + ++ + + + ++ GL D +LN++L CLC R
Sbjct: 60 MMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNR 119
Query: 247 LHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
L G A + ++ N++TYN +I G ++ E R+ + G +PD +T+
Sbjct: 120 LREGFA-AFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYG 178
Query: 307 FLIEGLGRAGRIDDAIEVFDTM------KEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
LI+GL G I+ A+++ M E C P+ YN ++ VG DE + +
Sbjct: 179 TLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLF 238
Query: 361 KGMSS----------YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
+ M + +P+M T+ LI L K KV +A ++ M++ GIVP T
Sbjct: 239 EEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTY 298
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
S +E C G ++A ++ GC+ + +Y +L+ S K + L++EM
Sbjct: 299 NSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLL 358
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G + Y+ ++ G+ G++++A + G + Y + L ++ L
Sbjct: 359 VGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFE 418
Query: 531 AYNLFRKIK 539
A LF ++K
Sbjct: 419 AMKLFTELK 427
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/419 (20%), Positives = 188/419 (44%), Gaps = 19/419 (4%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNV----LSDMAKEGVN--PD 197
EA LF ++ DV +Y ++K L + + L+D+++ +N P+
Sbjct: 157 EATRLFLR--MQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPN 214
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLE----------DFGLKFDAESLNVVLWCLCQRL 247
+ T +I++D + G+ +A Q+ ++ D GL+ D + NV++ LC+
Sbjct: 215 VITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEG 274
Query: 248 HVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
V A L M + ++ +++TYN +I G+ +G + + + ++G PD ++++
Sbjct: 275 KVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYN 334
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
LI G + ++++A+++++ M G P+ Y++++ G D+ K + M ++
Sbjct: 335 VLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAH 394
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
N TY + GL K+ + +A+++F E+ + ++ LC G A
Sbjct: 395 GIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETA 454
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+++K G + ++ Y +++ G+ L +M+ +G D Y ++ G
Sbjct: 455 WELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRG 514
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQND 545
+LE V ++ +K P + S + + L K + +L + I + D
Sbjct: 515 FYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGVD 573
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 92/219 (42%), Gaps = 16/219 (7%)
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK-----GMSSYNCEPNMDTY 375
A+ F M P +++N ++S + + + Y G+SS C N+
Sbjct: 53 ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNI--- 109
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
L++ L ++ + F +L RG P+ T + ++ LC A ++ + +K
Sbjct: 110 --LLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQK 167
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM------QESGYPSDGEIYEYVIAGLCN 489
+GC + Y L++ L G G + L L EM E + Y ++ GLC
Sbjct: 168 LGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCK 227
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
+G+ + A + EE +G P+ ++ L ++ N L
Sbjct: 228 VGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVL 266
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 202/428 (47%), Gaps = 6/428 (1%)
Query: 114 GVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKAL 173
G++ + VNV + +++V K + R EAM L K +V+ D+ SYN ++ L
Sbjct: 133 GLVLKRGFTVNVFI-MNIVLKGLCRNGGVFEAMGLIREMGRK--SVSPDIVSYNTLINGL 189
Query: 174 GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA 233
+ K +L +M G P+ T + +MD + G++ +A+++L ++ G D
Sbjct: 190 CKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADV 249
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
++ C ++ LF+ M GK + NV+TY+ ++ G +LGQ E VL
Sbjct: 250 VLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNA 309
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+ G PD +T++ LI+GL + GR A+++ + M EKG P YN ++S G
Sbjct: 310 MAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGL 369
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD--RGIVPSTGTI 410
+ K + M + ++ TY L+ GL KV +AL++F M D + P+ T
Sbjct: 370 VIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTF 429
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+ LC G A+ +++K K G +L Y +LL GK ++LW ++ +
Sbjct: 430 NMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLD 489
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G+ + Y +I G C + L A + E G P+ Y+ L L LE
Sbjct: 490 LGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQ 549
Query: 531 AYNLFRKI 538
A +LF+++
Sbjct: 550 AKSLFQEM 557
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 196/412 (47%), Gaps = 38/412 (9%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+ N +V AL R + + +V M V P +LS +++ F A + ++G +
Sbjct: 76 TCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLV 135
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
G + +N+VL LC+ V A L M K V ++++YN +I+G K ++
Sbjct: 136 LKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKL 195
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E +L E+ A G P+S+T + L++GL + GR+D+A+E+ + MK+KG D Y +
Sbjct: 196 KEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTL 255
Query: 344 ISNYISVGDFDECMKYY-----KGMS----SYNC-------------------------- 368
IS + + G+ D + + KG+S +Y+C
Sbjct: 256 ISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGI 315
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P++ TYT LI GL K + A+++ M+++G PS T L LC G A
Sbjct: 316 HPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFK 375
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY--VIAG 486
+ + + G K + Y L++ L GK L L++ M ++ + ++ + +I G
Sbjct: 376 ILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGG 435
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
LC G+L AV + + ++KG C + + Y+ L L + K++ A L++++
Sbjct: 436 LCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQV 487
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 197/437 (45%), Gaps = 14/437 (3%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L+ +K KG ++ +V L ++ N GNL LF K ++ +V +
Sbjct: 236 LLEAMKKKG------FDADVVLYGTLISGFCNNGNLD-RGKELFDEMLGK--GISANVVT 286
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y+ +V L R + VL+ MA+ G++PD+ T + ++D + G+ A+ +L +
Sbjct: 287 YSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMV 346
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQV 283
+ G + + NV+L LC+ V A + M KGK +V+TYN ++ G G+V
Sbjct: 347 EKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA-DVVTYNTLMKGLCDKGKV 405
Query: 284 VEMERVLKEIV--AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
E ++ + P+ TF+ LI GL + GR+ A+++ M +KG + YN
Sbjct: 406 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYN 465
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++ + G E M+ +K + PN TY+ LI G K R + A +F EM
Sbjct: 466 MLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTH 525
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G+ P+ + + LC G A ++++ C+ + ++ ++ G +
Sbjct: 526 GLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFV 585
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+L +M E G D + +I L +G+L+ A +E + GF P LVY L
Sbjct: 586 KELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 645
Query: 522 LLASNKLESAYNLFRKI 538
L + NL ++
Sbjct: 646 LSSKGDTTEIINLLHQM 662
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 163/375 (43%), Gaps = 38/375 (10%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
A+ + DV +Y ++ L + ++L+ M ++G P T ++++ + G
Sbjct: 309 AMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEG 368
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------------- 259
V A ++L + + G K D + N ++ LC + V A LFNSM
Sbjct: 369 LVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFT 428
Query: 260 -------------------------KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
K N++TYN+++ G K G++ E + K+++
Sbjct: 429 FNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVL 488
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
GF P+S T+S LI+G + ++ A +F M+ G P YN ++++ G +
Sbjct: 489 DLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLE 548
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ ++ M + NCEP++ ++ +I G LK+ E+ +M++ G+ P T ++ +
Sbjct: 549 QAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLI 608
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
L G A ++ G Y LL+ LS G +++L H+M G
Sbjct: 609 NRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTV 668
Query: 475 SDGEIYEYVIAGLCN 489
D +I ++ LC+
Sbjct: 669 LDRKIVSTILTCLCH 683
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 155/351 (44%), Gaps = 15/351 (4%)
Query: 196 PDLETLSIVMDSFIR------AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC--QRL 247
P T + ++D+ R A VY+ + + L FG SL+ ++ C Q+
Sbjct: 72 PSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFG------SLSALIECFADAQKP 125
Query: 248 HVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+G +G + NV NIV+ G + G V E +++E+ + SPD ++++
Sbjct: 126 QLGFGVVGLVLKRGFTV-NVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNT 184
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI GL +A ++ +A+ + M+ GC P++ ++ G DE M+ + M
Sbjct: 185 LINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKG 244
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
+ ++ Y LISG + + E+F+EML +GI + T + + LC G A
Sbjct: 245 FDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEAN 304
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+ + G + Y L+ L G+ +DL + M E G Y +++GL
Sbjct: 305 TVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGL 364
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
C G + +A ++ + KG + Y+ L L K++ A LF +
Sbjct: 365 CKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM 415
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
G P+ T SI++D F + + A + + GL N ++ LC+ + A
Sbjct: 491 GFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQA 550
Query: 253 SSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
SLF M +++++N +I G K G ++ + ++V G PD+LTFS LI
Sbjct: 551 KSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINR 610
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
L + G +D+A + M G PD Y++++ S GD E + M++ +
Sbjct: 611 LSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLD 670
Query: 372 MDTYTRLISGLLKSRKVADALEVF 395
+ +++ L S + D +E+
Sbjct: 671 RKIVSTILTCLCHSIQEVDVMELL 694
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 77/187 (41%)
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
F E + + +N P+ T L+ L +SR A V+ M ++PS G++++
Sbjct: 55 FTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSA 114
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
+E P + K G +++ ++L+ L G + L EM
Sbjct: 115 LIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKS 174
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
D Y +I GLC +L+ AV ++ E G P+ + + L + L +++ A
Sbjct: 175 VSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAM 234
Query: 533 NLFRKIK 539
L +K
Sbjct: 235 ELLEAMK 241
>gi|225430190|ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial [Vitis vinifera]
gi|296081989|emb|CBI20994.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 190/439 (43%), Gaps = 18/439 (4%)
Query: 110 LKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVI 169
L +EDAL + ++ + + + S + + F WA+K P + +N +
Sbjct: 84 LSSGAPLEDALNRTGIKPCSGLLQAIFSHFDASPKPLFTLFRWAMKQPGFESSMTLFNSM 143
Query: 170 VKALGRRKFFDFMCNVLSDMAKEGVNPDL---ETLSIVMDSFIRAGQVYKAIQMLGRLED 226
+ L + + FD ++ D + G P+L T ++++ + RAG AI+ +
Sbjct: 144 IDVLAKSRAFDSAWLLVLDRIEGGEEPELVSSNTFAVLIRRYARAGMTLSAIRTF----E 199
Query: 227 FGLKFDA--------ESLNVVLWCLCQRLHVGAASSLFNSMKG---KVLFNVMTYNIVIS 275
F D+ ++L LC+ HV AS F+ +G + ++ YN++++
Sbjct: 200 FAFSLDSIRDRDSEWSLFKILLDSLCKEGHVRVASEYFDQQRGLDPSWVPSIRVYNVLLN 259
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
GW + ++ E++ + + E P +T+ L+EG R R + AIE+ M+ KG P
Sbjct: 260 GWFRSRKLKRAEQLWRTMKRENVKPTVVTYGTLVEGYCRMRRSEKAIELVGEMRGKGIEP 319
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+ YN +I + G F E M + P + TY L+ G K+ + A +V
Sbjct: 320 NVIVYNPIIDSLAEAGRFKEAMGMMERCLVSETGPTISTYNSLVKGFCKAGDLVGASKVL 379
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
+ M+ RG P+ T F G M +Y K + G Y LL++ +
Sbjct: 380 KMMISRGFDPTLTTYNYFFRYFSRCGKTEEGMNLYTKMIESGHTPDRLTYHLLIKMMCEE 439
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
+ + + + EM+ G D ++ LC + +LE A E+ +R+G P L +
Sbjct: 440 ERLDLAVQVSKEMRARGCDLDLATSTMLVHLLCKMHRLEEAFAEFEDMIRRGIVPQYLTF 499
Query: 516 SKLSNKLLASNKLESAYNL 534
+++N L E A L
Sbjct: 500 ERMNNALRKRGLTEMARKL 518
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 116/284 (40%), Gaps = 20/284 (7%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT--------FSFLIEGLGRAGRIDD 320
T+ ++I +++ G + R + FS DS+ F L++ L + G +
Sbjct: 177 TFAVLIRRYARAGMTLSAIRTFEF----AFSLDSIRDRDSEWSLFKILLDSLCKEGHVRV 232
Query: 321 AIEVFDTMK--EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
A E FD + + P YN +++ + + ++ M N +P + TY L
Sbjct: 233 ASEYFDQQRGLDPSWVPSIRVYNVLLNGWFRSRKLKRAEQLWRTMKRENVKPTVVTYGTL 292
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
+ G + R+ A+E+ EM +GI P+ ++ L G AM M ++
Sbjct: 293 VEGYCRMRRSEKAIELVGEMRGKGIEPNVIVYNPIIDSLAEAGRFKEAMGMMERCLVSET 352
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLL---DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
+++ Y L++ GF K G L+ + M G+ Y Y G+ E
Sbjct: 353 GPTISTYNSLVK---GFCKAGDLVGASKVLKMMISRGFDPTLTTYNYFFRYFSRCGKTEE 409
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + + + G P RL Y L + +L+ A + ++++
Sbjct: 410 GMNLYTKMIESGHTPDRLTYHLLIKMMCEEERLDLAVQVSKEMR 453
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 192/415 (46%), Gaps = 38/415 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV--NPDLETLSIVMDSFIRAGQVYKAIQ 219
DV SY++++K+L + ++L MA+ G +P++ + V+D F + G V KA
Sbjct: 194 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACD 253
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
+ + G+ D + N V+ LC+ + A + M K VL N TYN +I G+S
Sbjct: 254 LFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS 313
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
GQ E RV KE+ PD +T S L+ L + G+I +A +VFDTM KG PD
Sbjct: 314 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 373
Query: 339 AYNAVISNYISVG-------------------DF----------------DECMKYYKGM 363
+YN +++ Y + G DF D+ M + M
Sbjct: 374 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 433
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ +P++ TY +I+ L + K+ DA+E F +M+D+G+ P ++ C++G
Sbjct: 434 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSL 493
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A + + G L + + ++ L G+ +++ G D +Y +
Sbjct: 494 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSML 553
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ G C +G++E A+ V + + G P+ +VY L N +++ +LFR++
Sbjct: 554 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREM 608
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 197/418 (47%), Gaps = 5/418 (1%)
Query: 125 VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCN 184
V LS+ ++G + G + EA +F A+K N DV SYN+++ + M +
Sbjct: 338 VTLSM-LMGSLCKYGKIK-EARDVFDTMAMKGQN--PDVFSYNIMLNGYATKGCLVDMTD 393
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ M +G+ PD T ++++ ++ G + KA+ + + D G+K D + V+ LC
Sbjct: 394 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 453
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ + A FN M + V + YN +I G+ G +++ + ++ EI+ G D +
Sbjct: 454 RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 513
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
FS +I L + GR+ DA +FD G PD Y+ ++ Y VG ++ ++ + M
Sbjct: 514 FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAM 573
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
S EPN+ Y L++G K ++ + L +F EML RGI PST + ++ L G
Sbjct: 574 VSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRT 633
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A M + + + G + + Y ++LR L + L+ E++ + +
Sbjct: 634 VPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 693
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
I G+ ++E A + R P+ + YS + L+ +E A ++F ++ A
Sbjct: 694 IDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 751
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 183/382 (47%), Gaps = 3/382 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D+ +YN +V AL + + D L M + V P+ T + ++ + GQ +A+
Sbjct: 263 IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAV 322
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
++ + + D +L++++ LC+ + A +F++M KG+ +V +YNI+++G
Sbjct: 323 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP-DVFSYNIMLNG 381
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
++ G +V+M + ++ +G +PD TF+ LI+ G +D A+ +F+ M++ G PD
Sbjct: 382 YATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPD 441
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y VI+ +G D+ M+ + M P+ Y LI G + A E+
Sbjct: 442 VVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELIS 501
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
E+++ G+ +S + LC G A ++ VG Y +L+ G
Sbjct: 502 EIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVG 561
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K L ++ M +G + +Y ++ G C IG+++ + + E L++G PS ++YS
Sbjct: 562 KMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYS 621
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
+ + L + + A F ++
Sbjct: 622 IIIDGLFQAGRTVPAKMKFHEM 643
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 164/387 (42%), Gaps = 45/387 (11%)
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF---------------------- 231
++P T +I+MD RA + A+ G+L GL+
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179
Query: 232 --------------DAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLF-NVMTYNIVI 274
D S +++L LC + G A L M G V NV+ YN VI
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ K G V + + KE+V G PD +T++ ++ L +A +D A M K
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 299
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ YN +I Y S G + E ++ +K M ++ P++ T + L+ L K K+ +A +V
Sbjct: 300 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 359
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F+ M +G P + L + G ++ G + +L++
Sbjct: 360 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK---A 416
Query: 455 FGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
+ CGML + +++EM++ G D Y VIA LC IG++++A+ + + +G P
Sbjct: 417 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 476
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y+ L L A L +I
Sbjct: 477 KYAYNCLIQGFCTHGSLLKAKELISEI 503
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 158/364 (43%), Gaps = 45/364 (12%)
Query: 112 GKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVK 171
G G+ D + NV ++ N G L +AM++F N H V DV +Y ++
Sbjct: 400 GDGIAPD-FYTFNV-----LIKAYANCGMLD-KAMIIF-NEMRDH-GVKPDVVTYRTVIA 450
Query: 172 ALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF 231
AL R D + M +GV PD + ++ F G + KA +++ + + G+
Sbjct: 451 ALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHL 510
Query: 232 DAESLNVVLWCLCQRLHVGAASSLFNS----------------MKGKVLF---------- 265
D + ++ LC+ V A ++F+ M G L
Sbjct: 511 DIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVF 570
Query: 266 ----------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
NV+ Y +++G+ K+G++ E + +E++ G P ++ +S +I+GL +A
Sbjct: 571 DAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQA 630
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
GR A F M E G D YN V+ FDE + +K + + N + N+ T
Sbjct: 631 GRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL 690
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
+I G+ ++R+V +A ++F + +VP+ T + + L G A M+ +
Sbjct: 691 NTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQN 750
Query: 436 VGCK 439
GC+
Sbjct: 751 AGCE 754
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 90/193 (46%), Gaps = 1/193 (0%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
A+ + +V Y +V + D ++ +M + G+ P SI++D +AG
Sbjct: 572 AMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAG 631
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYN 271
+ A + + G+ D + N+VL L + A LF ++ V N++T N
Sbjct: 632 RTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLN 691
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I G + +V E + + I P+ +T+S +I L + G +++A ++F +M+
Sbjct: 692 TMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 751
Query: 332 GCGPDTNAYNAVI 344
GC P++ N V+
Sbjct: 752 GCEPNSRLLNHVV 764
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 97/208 (46%), Gaps = 1/208 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V M G+ P++ +++ + + G++ + + + + G+K ++++ L
Sbjct: 569 VFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLF 628
Query: 245 QRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
Q A F+ M + + ++ TYNIV+ G K E + KE+ A + +
Sbjct: 629 QAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINII 688
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T + +I+G+ + R+++A ++F ++ P+ Y+ +I+N I G +E + M
Sbjct: 689 TLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSM 748
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADA 391
+ CEPN ++ LLK ++ A
Sbjct: 749 QNAGCEPNSRLLNHVVRELLKKNEIVRA 776
>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Brachypodium distachyon]
Length = 570
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 180/416 (43%), Gaps = 1/416 (0%)
Query: 125 VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCN 184
V +S +V K++ R A FF WA YN++V LG+ K FD +
Sbjct: 122 VRVSGRMVDKILRRFGSDWVAAFGFFMWAGAQEGYCHHADLYNLMVDILGKFKQFDLLWG 181
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
++ M + G L T++ VM A + AI +++ FG+ D +++N +L LC
Sbjct: 182 LIRQMDEIGCLVSLATMTKVMRRLAGANRWTDAIDAFNKMDQFGVVRDTKAMNALLDTLC 241
Query: 245 QRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
+ V A +F ++G V + ++N ++ GW + + E +KE+ GFSP +T
Sbjct: 242 KEKSVKRARGVFQELRGVVPPDESSFNTLVHGWCQARMLNEARDTMKEMEEHGFSPSVIT 301
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
++ LIE + + M KGC P+ Y V+ G E + + +
Sbjct: 302 YTSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVITYTIVMHALGKAGRTQEALDVFDKVK 361
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
C P+ Y +I L ++ ++ DA VF+EM GI P+ + + C +
Sbjct: 362 RDGCVPDASFYNSIIYILGRAGRLEDANSVFDEMCRTGIPPTVAIFNTMISAACDHSQAE 421
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A+ + K + CK + Y LL+ +L L M D Y ++
Sbjct: 422 NALKILVKMEEQSCKPDIKTYTPLLKLCCKRQWMKILPFLICHMFRKDISPDFSTYILLV 481
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
LC G+ + L +EE + KGF P + + + KL N L SA + +K+
Sbjct: 482 TWLCRNGKPAQSCLFLEEMVLKGFMPKQETFDLVMEKLDKGN-LHSAKKKIQHLKL 536
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 180/379 (47%), Gaps = 1/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y +V L +R D ++L M K + D+ + ++D + + A +
Sbjct: 219 DLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALF 278
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
++E G++ D + N ++ CLC AS L ++M + K+ NV+T++ +I + K
Sbjct: 279 NKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKE 338
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++VE E++ E++ PD T+S LI G R+D+A +F+ M K C P+ Y
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I + +E M+ ++ MS N TY LI GL ++ A ++F++M+
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ P T + L+ LC YG A+++++ +K + + Y +++ + GK
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
DL+ + G + IY +I+G C G E A + E G P Y+ L
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIR 578
Query: 521 KLLASNKLESAYNLFRKIK 539
L ++ L ++++
Sbjct: 579 ARLRDGDKAASAELIKEMR 597
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/493 (23%), Positives = 216/493 (43%), Gaps = 55/493 (11%)
Query: 98 PEERLRGVFLQKLK---GKGVIEDALWNVNVDLSLDVVGKVVNRGNL----------SGE 144
P LRGV+ + + +AL N+ +D ++ + G++V L S
Sbjct: 31 PLFSLRGVYFSAASYDYREKLSRNALLNLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAI 90
Query: 145 AMVLFFNWAI------KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
A + F+ I ++ ++ D+ SYN+++ RR VL M K G PD+
Sbjct: 91 AKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDI 150
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLW----------------- 241
TLS +++ + + ++ A+ ++ ++ + G K D + N ++
Sbjct: 151 VTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQ 210
Query: 242 -----C-------------LCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQ 282
C LC+R + A SL M KGK+ +V+ YN +I G K
Sbjct: 211 MVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 270
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ + + ++ +G PD T++ LI L GR DA + M E+ P+ ++A
Sbjct: 271 IDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSA 330
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I ++ G E K Y M + +P++ TY+ LI+G ++ +A +FE M+ +
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P+ T + ++ C M ++++ + G + Y L++ L G C M
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
++ +M G P D Y ++ GLC G+LE A++V E + P Y+ + +
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 523 LASNKLESAYNLF 535
+ K+E ++LF
Sbjct: 511 CKAGKVEDGWDLF 523
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 189/397 (47%), Gaps = 24/397 (6%)
Query: 124 NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAI------KHPN-------------VAKDVK 164
++DL+L ++ K+ +G + EA V+ +N I KH + + DV
Sbjct: 235 DIDLALSLLKKM-EKGKI--EADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVF 291
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ L + +LS+M + +NP++ T S ++D+F++ G++ +A ++ +
Sbjct: 292 TYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
+ D + + ++ C + A +F M K F NV+TYN +I G+ K +V
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E + +E+ G +++T++ LI+GL +AG D A ++F M G PD Y+ +
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ G ++ + ++ + EP++ TY +I G+ K+ KV D ++F + +G+
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T+ + C G A ++++ ++ G Y L+R G +
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAE 591
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
L EM+ G+ D VI L + G+LE + L M
Sbjct: 592 LIKEMRSCGFVGDASTISMVINMLHD-GRLEKSYLEM 627
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 179/391 (45%), Gaps = 36/391 (9%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
++ M + G P+ T V++ ++GQ A+++L ++E+ +K DA ++++ LC
Sbjct: 313 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 372
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG------WS------------------- 278
+ + A +LFN M+ K + N++TYNI+I G W
Sbjct: 373 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 432
Query: 279 ----------KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
K G++ E E + KE++ G +PD++T++ LI+G + +D A ++ D M
Sbjct: 433 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 492
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
KGC P+ +N +I+ Y D+ ++ ++ MS + TY LI G + K+
Sbjct: 493 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 552
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A E+F+EM+ R + P+ T L+ LC G A+ +++K K +L + Y ++
Sbjct: 553 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 612
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ + K DL+ + G + Y +I GLC G L A L+ + G
Sbjct: 613 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 672
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P Y+ L L + L ++K
Sbjct: 673 APDGWTYNILIRAHLGDGDATKSVKLIEELK 703
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 186/385 (48%), Gaps = 1/385 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+A ++ + ++++ R + + + + K G P+ T S +++ G+V +A+
Sbjct: 217 IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEAL 276
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+++ R+ + G K D ++N ++ LC A L + M + N +TY V++
Sbjct: 277 ELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 336
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K GQ +L+++ D++ +S +I+GL + G +D+A +F+ M+ KG +
Sbjct: 337 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNI 396
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I + + G +D+ K + M PN+ T++ LI +K K+ +A E+ +E
Sbjct: 397 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 456
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ RGI P T T TS ++ C A M GC ++ + +L+ +
Sbjct: 457 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 516
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L+L+ +M G +D Y +I G C +G+L A + +E + + P+ + Y
Sbjct: 517 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 576
Query: 518 LSNKLLASNKLESAYNLFRKIKIAR 542
L + L + + E A +F KI+ ++
Sbjct: 577 LLDGLCDNGESEKALEIFEKIEKSK 601
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 162/327 (49%), Gaps = 1/327 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ ++ +YN+++ +D +L DM K +NP++ T S+++DSF++ G++ +A
Sbjct: 392 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 451
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ + G+ D + ++ C+ H+ A+ + + M K N+ T+NI+I+G+
Sbjct: 452 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 511
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K ++ + + +++ G D++T++ LI+G G+++ A E+F M + P+
Sbjct: 512 CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 571
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y ++ G+ ++ ++ ++ + E ++ Y +I G+ + KV DA ++F
Sbjct: 572 VTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 631
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ +G+ P T + LC GP A ++++K + G Y +L+R G G
Sbjct: 632 LPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGD 691
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVI 484
+ L E++ G+ D + VI
Sbjct: 692 ATKSVKLIEELKRCGFSVDASTIKMVI 718
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 129/280 (46%), Gaps = 36/280 (12%)
Query: 259 MKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+KG + N+ T +I+I+ + + ++ + +I+ G+ P+++TFS LI GL GR+
Sbjct: 214 LKG-IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRV 272
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
+A+E+ D M E G PD + T L
Sbjct: 273 SEALELVDRMVEMGHKPD-----------------------------------LITINTL 297
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
++GL S K A+A+ + ++M++ G P+ T L +C G AM + +K +
Sbjct: 298 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 357
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
KL Y +++ L G +L++EM+ G ++ Y +I G CN G+ ++
Sbjct: 358 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 417
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++ + +++ P+ + +S L + + KL A L +++
Sbjct: 418 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 457
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 98/241 (40%), Gaps = 35/241 (14%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P + FS L + + + D + + M+ KG + + +I+ +
Sbjct: 184 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 243
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ EPN T++ LI+GL +V++ALE+ + M++ G P TI + + LC
Sbjct: 244 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 303
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
G AM++ K + GC+ + Y +L + G+ + ++L +M+E D
Sbjct: 304 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 363
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y +I GLC G L+NA +NLF +++
Sbjct: 364 YSIIIDGLCKHGSLDNA-----------------------------------FNLFNEME 388
Query: 540 I 540
+
Sbjct: 389 M 389
>gi|356531098|ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 209/461 (45%), Gaps = 18/461 (3%)
Query: 107 LQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSY 166
+ L G +E+AL + + LS +V ++R + + FF WA + + + +Y
Sbjct: 1 MDNLAGFNNMENALGQLGIPLSTPLVTGGLHRLRYDEKIALRFFTWAGHQEDYSHEPCAY 60
Query: 167 NVIVKALGRRKF----FDFMCNVLSDMAKEG-VNPDLETLSIVMDSFIRAGQVYKAIQML 221
N ++ L ++ F +C+VL M + E L +++ + + +Q
Sbjct: 61 NDMMDILSSTRYKVKQFRIVCDVLEYMKRNNRTMVPAEVLLVILRKYTE--KYLTHMQKF 118
Query: 222 GRLEDFGLKFDAE--SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSK 279
+ + +K E + N++L LC+ V A SL+ M+ V N TYNI++ GW +
Sbjct: 119 AKKKRIRVKTQLEINAFNLLLDALCKCCLVEDAESLYKKMRKTVKPNAETYNILVFGWCR 178
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG---CGPD 336
+ ++L+E++ G PD+ T++ I+ + G I +A+++F+ M+ KG P
Sbjct: 179 VRNPTRGMKLLEEMIELGHRPDNFTYNTAIDTYCKTGMITEAVDLFEFMRTKGSTISSPT 238
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y +I ++C K M S C P++ TY +I G+ K+ +A + E
Sbjct: 239 AKTYAIIIVALAQHDRMEDCFKLIGHMISSGCLPDVTTYKEIIEGMCMCGKIDEAYKFLE 298
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
EM ++ P T FL+ LC A+ +Y + ++ C S+ Y +L+
Sbjct: 299 EMGNKSYRPDIVTYNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEMD 358
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ W E+ G D + Y +I GL N ++E+A ++EE + +G +L Y
Sbjct: 359 DPDGAFETWQEIDNRGCRPDTDTYCVMIEGLFNCNKMEDACFLLEEVINEGV---KLPYK 415
Query: 517 KLSN---KLLASNKLESAYNLFRKIKIARQNDYARRLWRSK 554
K + +L L++ + L +K + ARR S+
Sbjct: 416 KFDSFLMQLSVIGDLQAIHRLSEHMKKFYNHGMARRFALSQ 456
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 204/451 (45%), Gaps = 45/451 (9%)
Query: 124 NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMC 183
+V L ++ + RG S A VL A + A DV +YN +V R D
Sbjct: 108 DVYLCTKLIRNLCRRGRTSDAARVL---RAAERSGTAVDVFAYNTLVAGYCRYGQLDAAR 164
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
+++ M V PD T + ++ G+V +A+ +L + G + + V+L +
Sbjct: 165 RLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAV 221
Query: 244 CQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C+ G A + + M+ K N++TYN++I+G + G+V + L + + GF PD+
Sbjct: 222 CKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDT 281
Query: 303 LTFSFLIEGLG-----------------------------------RAGRIDDAIEVFDT 327
++++ +++GL R G ++ AI+V +
Sbjct: 282 VSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQ 341
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M GC +T N VI+ G D+ ++ M SY C P+ +YT ++ GL ++ +
Sbjct: 342 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 401
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
DA E+ +EM+ + P+ T +F+ LC G A M+ ++ + GC++++ Y
Sbjct: 402 WEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNA 461
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L+ G+ L+L++ M + Y ++ GLCN +L+ A ++ E L+K
Sbjct: 462 LVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD 518
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ + ++ L + ++ A L ++
Sbjct: 519 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 549
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 195/445 (43%), Gaps = 42/445 (9%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
++ + +RG + GEA+ L + + H V +Y V+++A+ + F VL +M
Sbjct: 182 IIRGLCDRGRV-GEALSLLDD--MLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR 238
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+G P++ T +++++ R G+V A + L RL +G + D S VL LC
Sbjct: 239 AKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWE 298
Query: 251 AASSLF------NSMKGKVLF------------------------------NVMTYNIVI 274
LF N M +V F N NIVI
Sbjct: 299 DVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVI 358
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+ K G+V + + L + + G SPD+++++ +++GL RA R +DA E+ M K C
Sbjct: 359 NTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCP 418
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ +N I G ++ + MS + CE N+ TY L++G +V ALE+
Sbjct: 419 PNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALEL 478
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F M + P+T T T+ L LC+ AA + + + C ++ + +L+
Sbjct: 479 FYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQ 535
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G ++L +M E G + Y ++ G+ E A+ ++ + G P +
Sbjct: 536 KGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVT 595
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
YS + L +++E A +F ++
Sbjct: 596 YSSIIGVLSREDRVEEAIKMFHIVQ 620
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 175/375 (46%), Gaps = 4/375 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D SY ++K L K ++ + + ++M ++ P+ T +++ F R G V +AIQ+L
Sbjct: 280 DTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVL 339
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKL 280
++ G + N+V+ +C++ V A N+M + ++Y V+ G +
Sbjct: 340 EQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRA 399
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ + + +LKE+V + P+ +TF+ I L + G I+ A + + M E GC + Y
Sbjct: 400 ERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 459
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
NA+++ + G D ++ + M C+PN TYT L++GL + ++ A E+ EML
Sbjct: 460 NALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 516
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+ P+ T + C G A+ + ++ + GC +L Y LL ++
Sbjct: 517 KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEE 576
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L+L H + +G D Y +I L ++E A+ + G P ++Y+K+
Sbjct: 577 ALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILL 636
Query: 521 KLLASNKLESAYNLF 535
L + A + F
Sbjct: 637 ALCKRCNTDGAIDFF 651
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 161/346 (46%), Gaps = 2/346 (0%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
G PD+ + ++ + R G+ A ++L E G D + N ++ C+ + AA
Sbjct: 104 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 163
Query: 253 SSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
L SM V + TY +I G G+V E +L +++ G P +T++ L+E +
Sbjct: 164 RRLIASMP--VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAV 221
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
++ A+EV D M+ KGC P+ YN +I+ G D+ ++ +SSY +P+
Sbjct: 222 CKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDT 281
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
+YT ++ GL +++ D E+F EM+++ +P+ T + C G A+ + ++
Sbjct: 282 VSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQ 341
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
GC + T +++ + G+ + M G D Y V+ GLC +
Sbjct: 342 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 401
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
E+A +++E +RK P+ + ++ L +E A L ++
Sbjct: 402 WEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQM 447
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 168/380 (44%), Gaps = 10/380 (2%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A DV +++ L RR VL + G D+ + ++ + R GQ+ A +
Sbjct: 106 APDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARR 165
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
++ + + DA + ++ LC R VG A SL + M + +V+TY +++
Sbjct: 166 LIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVC 222
Query: 279 K---LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
K GQ +E VL E+ A+G +P+ +T++ +I G+ R GR+DDA E + + G P
Sbjct: 223 KSTGFGQAME---VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQP 279
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
DT +Y V+ + +++ + + M NC PN T+ L+ + V A++V
Sbjct: 280 DTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVL 339
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
E+M G +T + +C G A GC +Y +L+ L
Sbjct: 340 EQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRA 399
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
+ +L EM P + + I LC G +E A +++E+ G + + Y
Sbjct: 400 ERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 459
Query: 516 SKLSNKLLASNKLESAYNLF 535
+ L N +++SA LF
Sbjct: 460 NALVNGFCVQGRVDSALELF 479
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 173/383 (45%), Gaps = 6/383 (1%)
Query: 126 DLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNV 185
+++ D++ + RG + A+ + + H A + N+++ + ++ D
Sbjct: 316 EVTFDMLVRFFCRGGMVERAIQVLEQMS-GH-GCAANTTLCNIVINTICKQGRVDDAFQF 373
Query: 186 LSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
L++M G +PD + + V+ RA + A ++L + + + N + LCQ
Sbjct: 374 LNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 433
Query: 246 RLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
+ + A+ L M + N++TYN +++G+ G+V + L+ + P+++T
Sbjct: 434 KGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV---DSALELFYSMPCKPNTIT 490
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
++ L+ GL A R+D A E+ M +K C P+ +N ++S + G DE ++ + M
Sbjct: 491 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 550
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
+ C PN+ TY L+ G+ K +ALE+ ++ G+ P T +S + L
Sbjct: 551 EHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVE 610
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A+ M+ + +G + Y +L L +D + M +G + Y +I
Sbjct: 611 EAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLI 670
Query: 485 AGLCNIGQLENAVLVMEESLRKG 507
GL N L+ ++ E +G
Sbjct: 671 EGLANEDFLKETRDLLRELCSRG 693
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 63/149 (42%), Gaps = 3/149 (2%)
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A + + RG P T + LC G A + + A + G + + AY L
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTL-- 150
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
++G+ + G L + D Y +I GLC+ G++ A+ ++++ L +G P
Sbjct: 151 -VAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKIK 539
S + Y+ L + S A + +++
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMR 238
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 204/451 (45%), Gaps = 45/451 (9%)
Query: 124 NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMC 183
+V L ++ + RG S A VL A + A DV +YN +V R D
Sbjct: 77 DVYLCTKLIRNLCRRGRTSDAARVL---RAAERSGTAVDVFAYNTLVAGYCRYGQLDAAR 133
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
+++ M V PD T + ++ G+V +A+ +L + G + + V+L +
Sbjct: 134 RLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAV 190
Query: 244 CQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C+ G A + + M+ K N++TYN++I+G + G+V + L + + GF PD+
Sbjct: 191 CKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDT 250
Query: 303 LTFSFLIEGLG-----------------------------------RAGRIDDAIEVFDT 327
++++ +++GL R G ++ AI+V +
Sbjct: 251 VSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQ 310
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M GC +T N VI+ G D+ ++ M SY C P+ +YT ++ GL ++ +
Sbjct: 311 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 370
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
DA E+ +EM+ + P+ T +F+ LC G A M+ ++ + GC++++ Y
Sbjct: 371 WEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNA 430
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L+ G+ L+L++ M + Y ++ GLCN +L+ A ++ E L+K
Sbjct: 431 LVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD 487
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ + ++ L + ++ A L ++
Sbjct: 488 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 518
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 195/445 (43%), Gaps = 42/445 (9%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
++ + +RG + GEA+ L + + H V +Y V+++A+ + F VL +M
Sbjct: 151 IIRGLCDRGRV-GEALSLLDD--MLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR 207
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+G P++ T +++++ R G+V A + L RL +G + D S VL LC
Sbjct: 208 AKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWE 267
Query: 251 AASSLF------NSMKGKVLF------------------------------NVMTYNIVI 274
LF N M +V F N NIVI
Sbjct: 268 DVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVI 327
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+ K G+V + + L + + G SPD+++++ +++GL RA R +DA E+ M K C
Sbjct: 328 NTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCP 387
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ +N I G ++ + MS + CE N+ TY L++G +V ALE+
Sbjct: 388 PNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALEL 447
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F M + P+T T T+ L LC+ AA + + + C ++ + +L+
Sbjct: 448 FYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQ 504
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G ++L +M E G + Y ++ G+ E A+ ++ + G P +
Sbjct: 505 KGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVT 564
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
YS + L +++E A +F ++
Sbjct: 565 YSSIIGVLSREDRVEEAIKMFHIVQ 589
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 175/375 (46%), Gaps = 4/375 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D SY ++K L K ++ + + ++M ++ P+ T +++ F R G V +AIQ+L
Sbjct: 249 DTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVL 308
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKL 280
++ G + N+V+ +C++ V A N+M + ++Y V+ G +
Sbjct: 309 EQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRA 368
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ + + +LKE+V + P+ +TF+ I L + G I+ A + + M E GC + Y
Sbjct: 369 ERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 428
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
NA+++ + G D ++ + M C+PN TYT L++GL + ++ A E+ EML
Sbjct: 429 NALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 485
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+ P+ T + C G A+ + ++ + GC +L Y LL ++
Sbjct: 486 KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEE 545
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L+L H + +G D Y +I L ++E A+ + G P ++Y+K+
Sbjct: 546 ALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILL 605
Query: 521 KLLASNKLESAYNLF 535
L + A + F
Sbjct: 606 ALCKRCNTDGAIDFF 620
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 161/346 (46%), Gaps = 2/346 (0%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
G PD+ + ++ + R G+ A ++L E G D + N ++ C+ + AA
Sbjct: 73 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 132
Query: 253 SSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
L SM V + TY +I G G+V E +L +++ G P +T++ L+E +
Sbjct: 133 RRLIASMP--VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAV 190
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
++ A+EV D M+ KGC P+ YN +I+ G D+ ++ +SSY +P+
Sbjct: 191 CKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDT 250
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
+YT ++ GL +++ D E+F EM+++ +P+ T + C G A+ + ++
Sbjct: 251 VSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQ 310
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
GC + T +++ + G+ + M G D Y V+ GLC +
Sbjct: 311 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 370
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
E+A +++E +RK P+ + ++ L +E A L ++
Sbjct: 371 WEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQM 416
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 168/380 (44%), Gaps = 10/380 (2%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A DV +++ L RR VL + G D+ + ++ + R GQ+ A +
Sbjct: 75 APDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARR 134
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
++ + + DA + ++ LC R VG A SL + M + +V+TY +++
Sbjct: 135 LIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVC 191
Query: 279 K---LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
K GQ +E VL E+ A+G +P+ +T++ +I G+ R GR+DDA E + + G P
Sbjct: 192 KSTGFGQAME---VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQP 248
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
DT +Y V+ + +++ + + M NC PN T+ L+ + V A++V
Sbjct: 249 DTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVL 308
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
E+M G +T + +C G A GC +Y +L+ L
Sbjct: 309 EQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRA 368
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
+ +L EM P + + I LC G +E A +++E+ G + + Y
Sbjct: 369 ERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 428
Query: 516 SKLSNKLLASNKLESAYNLF 535
+ L N +++SA LF
Sbjct: 429 NALVNGFCVQGRVDSALELF 448
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 173/383 (45%), Gaps = 6/383 (1%)
Query: 126 DLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNV 185
+++ D++ + RG + A+ + + H A + N+++ + ++ D
Sbjct: 285 EVTFDMLVRFFCRGGMVERAIQVLEQMS-GH-GCAANTTLCNIVINTICKQGRVDDAFQF 342
Query: 186 LSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
L++M G +PD + + V+ RA + A ++L + + + N + LCQ
Sbjct: 343 LNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 402
Query: 246 RLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
+ + A+ L M + N++TYN +++G+ G+V + L+ + P+++T
Sbjct: 403 KGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV---DSALELFYSMPCKPNTIT 459
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
++ L+ GL A R+D A E+ M +K C P+ +N ++S + G DE ++ + M
Sbjct: 460 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 519
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
+ C PN+ TY L+ G+ K +ALE+ ++ G+ P T +S + L
Sbjct: 520 EHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVE 579
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A+ M+ + +G + Y +L L +D + M +G + Y +I
Sbjct: 580 EAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLI 639
Query: 485 AGLCNIGQLENAVLVMEESLRKG 507
GL N L+ ++ E +G
Sbjct: 640 EGLANEDFLKETRDLLRELCSRG 662
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 3/158 (1%)
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L+ +A+A + + RG P T + LC G A + + A + G +
Sbjct: 53 LIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVD 112
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ AY L ++G+ + G L + D Y +I GLC+ G++ A+ +++
Sbjct: 113 VFAYNTL---VAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLD 169
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ L +G PS + Y+ L + S A + +++
Sbjct: 170 DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR 207
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 88/236 (37%), Gaps = 38/236 (16%)
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
N NA + I+ D E + +S P++ T+LI L + + +DA V
Sbjct: 44 NPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRA 103
Query: 398 MLDRGIVPSTGTITSFLEPLCSYG--------------PPHA------------------ 425
G + + C YG P A
Sbjct: 104 AERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGE 163
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRL---SGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A+ + GC+ S+ Y +LL + +GFG+ +LD EM+ G + Y
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLD---EMRAKGCTPNIVTYNV 220
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+I G+C G++++A + GF P + Y+ + L A+ + E LF ++
Sbjct: 221 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 186/382 (48%), Gaps = 1/382 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
NVA DV +YN I++ L VL ++ PD+ T +I++++ + V +A
Sbjct: 154 NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQA 213
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISG 276
+++L + + G K D + NV++ +C+ + A N+M NV+T+NI++
Sbjct: 214 MKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRS 273
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
G+ ++ E++L +++ +G SP +TF+ LI L R G + AI++ + M GC P+
Sbjct: 274 MCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPN 333
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+ +YN ++ + D ++Y M S C P++ TY L++ L K KV A+E+
Sbjct: 334 SLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 393
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
++ +G P T + ++ L G A+ + + R+ G K + Y L+ LS G
Sbjct: 394 QLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREG 453
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K + +H+++ G + Y ++ GLC Q + A+ + + K P+ Y+
Sbjct: 454 KVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYT 513
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
L + + A +L ++
Sbjct: 514 ILIEGIAYEGLAKEALDLLNEL 535
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 171/356 (48%), Gaps = 4/356 (1%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V+ + + G PD+ T ++++ + ++G++ A+Q+L R+ + D + N +L LC
Sbjct: 114 VMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLC 170
Query: 245 QRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ A + + K + +V+TY I+I K V + ++L E+ +G PD +
Sbjct: 171 DSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVV 230
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T++ LI G+ + GR+D+AI+ + M GC P+ +N ++ + S G + + K M
Sbjct: 231 TYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDM 290
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
C P++ T+ LI+ L + + A+++ E+M G P++ + L C
Sbjct: 291 LRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKM 350
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+ GC + Y LL L GK + +++ +++ G Y V
Sbjct: 351 DRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTV 410
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I GL +G+ E A+ +++E RKG P + YS L + L K++ A F ++
Sbjct: 411 IDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLE 466
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 122/243 (50%), Gaps = 1/243 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V ++N+++ L R+ ++L M G P+ + + ++ F + ++ +AI+ L
Sbjct: 299 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 358
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM-TYNIVISGWSKLG 281
+ G D + N +L LC+ V A + N + K V+ TYN VI G SK+G
Sbjct: 359 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVG 418
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ ++L E+ +G PD +T+S L+ GL R G++D+AI+ F ++ G P+ YN
Sbjct: 419 KTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYN 478
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+++ D + + M S C+P TYT LI G+ +AL++ E+ R
Sbjct: 479 SIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSR 538
Query: 402 GIV 404
G+V
Sbjct: 539 GLV 541
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 3/260 (1%)
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ + + L+ +V G PD + + LI G R G+ A V + +++ G PD Y
Sbjct: 71 GELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITY 130
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +IS Y G+ D ++ M N P++ TY ++ L S K+ A+EV + L
Sbjct: 131 NVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 187
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+ P T T +E C AM + + R G K + Y +L+ + G+
Sbjct: 188 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 247
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ + M G + + ++ +C+ G+ +A ++ + LRKG PS + ++ L N
Sbjct: 248 AIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILIN 307
Query: 521 KLLASNKLESAYNLFRKIKI 540
L L A ++ K+ +
Sbjct: 308 FLCRQGLLGRAIDILEKMPM 327
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 96/224 (42%), Gaps = 3/224 (1%)
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
L R G ++D + ++M +G PD ++I + +G + + + P+
Sbjct: 67 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+ TY LISG KS ++ +AL+V + M + P T + L LC G AM +
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ + C + Y +L+ G + L EM+ G D Y +I G+C G
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+L+ A+ + G P+ + ++ + + ++ + A L
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLL 287
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 203/449 (45%), Gaps = 14/449 (3%)
Query: 100 ERLRGVFLQKLKGKGVIEDAL-WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPN 158
+R GV LQ + KGV D + +N +D + V+R + M+
Sbjct: 251 DRAEGV-LQHMIDKGVKPDVVTYNTIIDGLCK--AQAVDRAEGVLQHMI--------DKG 299
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V DV +YN I+ L + + D VL M + V PD++T + ++ ++ G+ + +
Sbjct: 300 VKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVV 359
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+ L + GL D + +++L LC+ A +F M K + NV Y I++ G+
Sbjct: 360 RRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGY 419
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G + ++ +L +VA G SP++ F+ ++ + ID+A+ +F M + G PD
Sbjct: 420 AARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDV 479
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +I +G D+ + + M + PN + L+ GL + A E+F E
Sbjct: 480 VTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFE 539
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M D+G+ P+ + + LC+ G A + +VG + ++ +Y L+ G+
Sbjct: 540 MWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGR 599
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L M G D Y+ ++ G C G+++NA + E LRKG P + YS
Sbjct: 600 TDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYST 659
Query: 518 LSNKLLASNKLESAYNLF-RKIKIARQND 545
+ L + + A L+ IK +Q D
Sbjct: 660 ILQGLFHTRRFSEAKELYLNMIKSGQQWD 688
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 170/390 (43%), Gaps = 39/390 (10%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL-EDFG--LKFDAESLNVVLW 241
+L M + G P++ + + ++ +V +A+++L + ED G + + N ++
Sbjct: 148 LLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIID 207
Query: 242 CLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
LC+ V A + M K V +V+TY+ +I G K V E VL+ ++ +G P
Sbjct: 208 GLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKP 267
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
D +T++ +I+GL +A +D A V M +KG PD YN +I D
Sbjct: 268 DVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVL 327
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
+ M + +P++ TY LI G L + + + + EEM RG+ P T + L+ LC
Sbjct: 328 QHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKN 387
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL---------------- 464
G A ++ + G K ++T Y +LL + G L DL
Sbjct: 388 GKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIF 447
Query: 465 -------------------WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+ M + G D Y +I LC +G++++AVL + +
Sbjct: 448 NIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMIN 507
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
G P+ +V++ L L ++ E A LF
Sbjct: 508 DGVTPNSVVFNSLVYGLCTVDRWEKAEELF 537
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 173/377 (45%), Gaps = 7/377 (1%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
+N+++ A ++ D ++ S M++ G++PD+ T I++D+ + G+V A+ ++
Sbjct: 447 FNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMI 506
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
+ G+ ++ N +++ LC A LF M + V NV+ +N ++ GQV+
Sbjct: 507 NDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVM 566
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+R++ + G P+ ++++ LI G AGR D+A ++ D M G PD +Y+ ++
Sbjct: 567 VAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLL 626
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
Y G D ++ M P TY+ ++ GL +R+ ++A E++ M+ G
Sbjct: 627 RGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQ 686
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
T L LC A +++ + ++ + +++ L G+ +DL
Sbjct: 687 WDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDL 746
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIG---QLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+ + G + Y ++ + G + +N L ME+S G P ++ + +
Sbjct: 747 FASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKS---GCTPDSVMLNAIIRS 803
Query: 522 LLASNKLESAYNLFRKI 538
LL ++ A KI
Sbjct: 804 LLGRGEIMRAGAYLSKI 820
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 168/378 (44%), Gaps = 1/378 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y++++ L + + M ++G+ P++ I++ + G + +L
Sbjct: 373 DVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLL 432
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
+ G+ + N+VL ++ + A +F+ M L +V+TY I+I KL
Sbjct: 433 DLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKL 492
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+V + +++ +G +P+S+ F+ L+ GL R + A E+F M ++G P+ +
Sbjct: 493 GRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFF 552
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N ++ N + G + M PN+ +Y LI G + + +A ++ + M+
Sbjct: 553 NTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVS 612
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ P + + L C G A ++++ + G Y +L+ L +
Sbjct: 613 VGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSE 672
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+L+ M +SG D Y ++ GLC ++ A + + K P+ + ++ + +
Sbjct: 673 AKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMID 732
Query: 521 KLLASNKLESAYNLFRKI 538
L + + A +LF I
Sbjct: 733 VLFKGGRKKDAMDLFASI 750
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 165/414 (39%), Gaps = 43/414 (10%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFF---DFMCNVLS 187
V+ G+L + + F+ + H A V+++N ++ + R + + ++ +
Sbjct: 18 VIADRARSGSLGIDDALKLFDELLPHARPAS-VRAFNHLLNVVARARCSSTSELAVSLFN 76
Query: 188 DMAK---EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
MA+ V PDL T SI+ F R G++ G + G + + +N +L LC
Sbjct: 77 RMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLC 136
Query: 245 QRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
V A M+ +L+ + G P+ ++
Sbjct: 137 DAKRVDEA---------------------------------MDILLRRMPEFGCMPNVVS 163
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKG---CGPDTNAYNAVISNYISVGDFDECMKYYK 361
+ L++GL R+++A+E+ TM E G C P+ YN +I D +
Sbjct: 164 CNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQ 223
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M + ++ TY+ +I GL K++ V A V + M+D+G+ P T + ++ LC
Sbjct: 224 HMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQ 283
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
A + + G K + Y ++ L + M + D + Y
Sbjct: 284 AVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYN 343
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+I G + G+ + V +EE +G P + YS L + L + K A +F
Sbjct: 344 CLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIF 397
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 169/420 (40%), Gaps = 26/420 (6%)
Query: 56 LKELSDLFQISSHNSF-PNVY----------KESRSNSVKRIDSSRAVDEFLLPEERLRG 104
+ +L+DL + N PN Y K++ + I SR L P+ G
Sbjct: 425 IADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHI-FSRMSQHGLSPDVVTYG 483
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVV-GKVVNRGNLSGEAMV--------LFFN-WAI 154
+ + L G ++DA+ N ++ V VV + G V LFF W
Sbjct: 484 ILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMW-- 541
Query: 155 KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV 214
V +V +N I+ L ++ M + GV P++ + + ++ AG+
Sbjct: 542 -DQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRT 600
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIV 273
+A Q+L + GLK D S + +L C+ + A LF M K V +TY+ +
Sbjct: 601 DEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTI 660
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
+ G + E + + ++ G D T++ ++ GL + +D+A ++F ++ K
Sbjct: 661 LQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDL 720
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
P+ + +I G + M + + S+ PN+ TY ++ +++ + +
Sbjct: 721 RPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDN 780
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+F M G P + + + + L G A K ++ L + LL+ S
Sbjct: 781 LFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFS 840
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 186/404 (46%), Gaps = 6/404 (1%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
+L+ +A L F+ N + + N++V + FD + V+S+M K V PD+
Sbjct: 77 HLAADAYRLVFS-----SNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 131
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
T ++++D+ RAG A+ ++ + GLK + N VL LC+ A +F M
Sbjct: 132 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 191
Query: 260 KG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
V +V ++ I+I G+ ++G++ E ++ KE+ G PD ++FS LI R G++
Sbjct: 192 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 251
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
D A+ M+ G PD Y VI + G + ++ M C P++ TY L
Sbjct: 252 DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL 311
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
++GL K R++ DA + EM +RG+ P T T+ + C G A+ ++
Sbjct: 312 LNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 371
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ + Y L+ + G DLW +M + Y +I C GQ+E+A
Sbjct: 372 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFG 431
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
++E + KG P+ + Y+ + S + +K+ + +
Sbjct: 432 FLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 475
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 170/377 (45%), Gaps = 1/377 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
VA DV+S+ +++ R + + +M G+ PDL + S ++ F R G++ A+
Sbjct: 196 VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAM 255
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGW 277
L + FGL D +V+ C+ + A + + M G L +V+TYN +++G
Sbjct: 256 AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 315
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K ++++ E +L E+ G PD TF+ LI G G++D A+++FDTM + PD
Sbjct: 316 CKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDI 375
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I GD D+ + M S PN TY+ LI + +V DA +E
Sbjct: 376 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 435
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+++GI+P+ T S ++ C G +K L Y L+ K
Sbjct: 436 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 495
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L + M++ D Y +I G G ++ A + E+ KG P R Y
Sbjct: 496 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 555
Query: 518 LSNKLLASNKLESAYNL 534
+ N + + + A+ L
Sbjct: 556 MINGHVTAGNSKEAFQL 572
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 159/355 (44%), Gaps = 1/355 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++H + D+ S++ ++ RR D L +M G+ PD ++V+ F RAG
Sbjct: 226 MRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGL 285
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
+ A+++ + G D + N +L LC+ + A L N M+ + V ++ T+
Sbjct: 286 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 345
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G+ G++ + ++ ++ + PD +T++ LI+G+ R G +D A +++D M +
Sbjct: 346 LIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE 405
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ Y+ +I ++ G ++ + M + PN+ TY +I G +S V+
Sbjct: 406 IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQ 465
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+ ++M+ + P T + + H A + K + + Y +L+
Sbjct: 466 KFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGF 525
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
S G ++ +M G D Y +I G G + A + +E L++G
Sbjct: 526 SVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580
>gi|357455845|ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487251|gb|AES68454.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 503
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 184/400 (46%), Gaps = 12/400 (3%)
Query: 151 NWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR 210
N++ PN ++SYN+++ + + FD ++ +M + + P T I++ I
Sbjct: 83 NFSKSLPNPPLSLQSYNLLIDIVSKVHQFDLASQLIVEMDQINLPPTPTTFFILIKRLIS 142
Query: 211 AGQVYKAIQMLGRLEDF-GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMT 269
A +A++ +E + K ++ +L LC+ +V A LFN + + +V
Sbjct: 143 ANLTRQAVRAFNEIESYTDTKLTSDHFTYLLDTLCKYGYVKHACELFNRNSNRFVADVKM 202
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG----------RID 319
Y ++I GW K+G+ L E+ +G P+ +T++ ++ G+ R I
Sbjct: 203 YTVLIYGWCKIGRFKTALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEERFERTIR 262
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
DA +VFD M+E G PD +++ V+ Y + M PN+ TYT +I
Sbjct: 263 DAEKVFDEMRESGIEPDVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVI 322
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG-C 438
L ++ +A ++ +EM+ G+ P T F + A+ +KK ++ G C
Sbjct: 323 KCLCSCGRIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDADKALKFFKKMKEDGLC 382
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ + Y +L+ G++ ++W++M ESG D + Y +I GLC + A
Sbjct: 383 EPTTHTYGVLIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYTVLIHGLCESKKWREACQ 442
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
E + KGF P ++ + L L+ S+ L + L +++
Sbjct: 443 YFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKRL 482
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 108/265 (40%), Gaps = 51/265 (19%)
Query: 288 RVLKEIVAEGFSPDSLT---FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
R EI E ++ LT F++L++ L + G + A E+F+ + D Y +I
Sbjct: 151 RAFNEI--ESYTDTKLTSDHFTYLLDTLCKYGYVKHACELFNRNSNRFVA-DVKMYTVLI 207
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK----------SRKVADALEV 394
+ +G F + + M EPN+ TY +++G+ + R + DA +V
Sbjct: 208 YGWCKIGRFKTALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKV 267
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F+EM + GI P +T++ ++L S
Sbjct: 268 FDEMRESGIEPD-----------------------------------VTSFSIVLHVYSR 292
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
K ++LD M+E G + Y VI LC+ G++E A +++E +R G P
Sbjct: 293 AHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRIEEAEDLIDEMVRNGVSPCAAT 352
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
Y+ + + A F+K+K
Sbjct: 353 YNCFFKEYRGRKDADKALKFFKKMK 377
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 74/174 (42%), Gaps = 2/174 (1%)
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
++ +Y LI + K + A ++ EM + P+ T ++ L S A+ +
Sbjct: 94 SLQSYNLLIDIVSKVHQFDLASQLIVEMDQINLPPTPTTFFILIKRLISANLTRQAVRAF 153
Query: 431 KKARK-VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ KL+ + LL L +G +L++ + + +D ++Y +I G C
Sbjct: 154 NEIESYTDTKLTSDHFTYLLDTLCKYGYVKHACELFNR-NSNRFVADVKMYTVLIYGWCK 212
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
IG+ + A+ + E KG P+ + Y+ + N + L R I+ A +
Sbjct: 213 IGRFKTALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEK 266
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 204/451 (45%), Gaps = 45/451 (9%)
Query: 124 NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMC 183
+V L ++ + RG S A VL A + A DV +YN +V R D
Sbjct: 77 DVYLCTKLIRNLCRRGRTSDAARVL---RAAERSGTAVDVFAYNTLVAGYCRYGQLDAAR 133
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
+++ M V PD T + ++ G+V +A+ +L + G + + V+L +
Sbjct: 134 RLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAV 190
Query: 244 CQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C+ G A + + M+ K N++TYN++I+G + G+V + L + + GF PD+
Sbjct: 191 CKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDT 250
Query: 303 LTFSFLIEGLG-----------------------------------RAGRIDDAIEVFDT 327
++++ +++GL R G ++ AI+V +
Sbjct: 251 VSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQ 310
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M GC +T N VI+ G D+ ++ M SY C P+ +YT ++ GL ++ +
Sbjct: 311 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 370
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
DA E+ +EM+ + P+ T +F+ LC G A M+ ++ + GC++++ Y
Sbjct: 371 WEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNA 430
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L+ G+ L+L++ M + Y ++ GLCN +L+ A ++ E L+K
Sbjct: 431 LVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD 487
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ + ++ L + ++ A L ++
Sbjct: 488 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 518
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 196/445 (44%), Gaps = 42/445 (9%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
++ + +RG + GEA+ L + + H V +Y V+++A+ + F VL +M
Sbjct: 151 IIRGLCDRGRV-GEALSLLDD--MLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR 207
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+G P++ T +++++ R G+V A + L RL +G + D S VL LC
Sbjct: 208 AKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWE 267
Query: 251 AASSLF------NSMKGKVLF------------------------------NVMTYNIVI 274
LF N M +V F N NIVI
Sbjct: 268 DVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVI 327
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+ K G+V + + L + + G SPD+++++ +++GL RA R +DA E+ M K C
Sbjct: 328 NTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCP 387
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ +N I G ++ + MS + CE N+ TY L++G +V ALE+
Sbjct: 388 PNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALEL 447
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F M + P+T T T+ L LC+ AA + + + C ++ + +L+
Sbjct: 448 FYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQ 504
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G ++L +M E G + Y ++ G+ N E A+ ++ + G P +
Sbjct: 505 KGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVT 564
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
YS + L +++E A +F ++
Sbjct: 565 YSSIIGVLSREDRVEEAIKMFHIVQ 589
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 175/375 (46%), Gaps = 4/375 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D SY ++K L K ++ + + ++M ++ P+ T +++ F R G V +AIQ+L
Sbjct: 249 DTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVL 308
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKL 280
++ G + N+V+ +C++ V A N+M + ++Y V+ G +
Sbjct: 309 EQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRA 368
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ + + +LKE+V + P+ +TF+ I L + G I+ A + + M E GC + Y
Sbjct: 369 ERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 428
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
NA+++ + G D ++ + M C+PN TYT L++GL + ++ A E+ EML
Sbjct: 429 NALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 485
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+ P+ T + C G A+ + ++ + GC +L Y LL ++
Sbjct: 486 KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEE 545
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L+L H + +G D Y +I L ++E A+ + G P ++Y+K+
Sbjct: 546 ALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILL 605
Query: 521 KLLASNKLESAYNLF 535
L + A + F
Sbjct: 606 ALCKRCNTDGAIDFF 620
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 161/346 (46%), Gaps = 2/346 (0%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
G PD+ + ++ + R G+ A ++L E G D + N ++ C+ + AA
Sbjct: 73 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 132
Query: 253 SSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
L SM V + TY +I G G+V E +L +++ G P +T++ L+E +
Sbjct: 133 RRLIASMP--VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAV 190
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
++ A+EV D M+ KGC P+ YN +I+ G D+ ++ +SSY +P+
Sbjct: 191 CKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDT 250
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
+YT ++ GL +++ D E+F EM+++ +P+ T + C G A+ + ++
Sbjct: 251 VSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQ 310
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
GC + T +++ + G+ + M G D Y V+ GLC +
Sbjct: 311 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 370
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
E+A +++E +RK P+ + ++ L +E A L ++
Sbjct: 371 WEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQM 416
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 168/380 (44%), Gaps = 10/380 (2%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A DV +++ L RR VL + G D+ + ++ + R GQ+ A +
Sbjct: 75 APDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARR 134
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
++ + + DA + ++ LC R VG A SL + M + +V+TY +++
Sbjct: 135 LIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVC 191
Query: 279 K---LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
K GQ +E VL E+ A+G +P+ +T++ +I G+ R GR+DDA E + + G P
Sbjct: 192 KSTGFGQAME---VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQP 248
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
DT +Y V+ + +++ + + M NC PN T+ L+ + V A++V
Sbjct: 249 DTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVL 308
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
E+M G +T + +C G A GC +Y +L+ L
Sbjct: 309 EQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRA 368
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
+ +L EM P + + I LC G +E A +++E+ G + + Y
Sbjct: 369 ERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 428
Query: 516 SKLSNKLLASNKLESAYNLF 535
+ L N +++SA LF
Sbjct: 429 NALVNGFCVQGRVDSALELF 448
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 178/400 (44%), Gaps = 9/400 (2%)
Query: 126 DLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNV 185
+++ D++ + RG + A+ + + H A + N+++ + ++ D
Sbjct: 285 EVTFDMLVRFFCRGGMVERAIQVLEQMS-GH-GCAANTTLCNIVINTICKQGRVDDAFQF 342
Query: 186 LSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
L++M G +PD + + V+ RA + A ++L + + + N + LCQ
Sbjct: 343 LNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 402
Query: 246 RLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
+ + A+ L M + N++TYN +++G+ G+V + L+ + P+++T
Sbjct: 403 KGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV---DSALELFYSMPCKPNTIT 459
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
++ L+ GL A R+D A E+ M +K C P+ +N ++S + G DE ++ + M
Sbjct: 460 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 519
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
+ C PN+ TY L+ G+ +ALE+ ++ G+ P T +S + L
Sbjct: 520 EHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVE 579
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A+ M+ + +G + Y +L L +D + M +G + Y +I
Sbjct: 580 EAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLI 639
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLV---YSKLSNK 521
GL N L+ ++ E +G L+ K SNK
Sbjct: 640 EGLANEDFLKETRDLLRELCSRGVLNKNLLEEWRPKFSNK 679
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 3/158 (1%)
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L+ +A+A + + RG P T + LC G A + + A + G +
Sbjct: 53 LIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVD 112
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ AY L ++G+ + G L + D Y +I GLC+ G++ A+ +++
Sbjct: 113 VFAYNTL---VAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLD 169
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ L +G PS + Y+ L + S A + +++
Sbjct: 170 DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR 207
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 90/247 (36%), Gaps = 38/247 (15%)
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
T E N NA + I+ D E + +S P++ T+LI L +
Sbjct: 33 TRPEAPSASSPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRG 92
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG--------------PPHA------- 425
+ +DA V G + + C YG P A
Sbjct: 93 RTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPII 152
Query: 426 -----------AMMMYKKARKVGCKLSLTAYKLLLRRL---SGFGKCGMLLDLWHEMQES 471
A+ + GC+ S+ Y +LL + +GFG+ +LD EM+
Sbjct: 153 RGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLD---EMRAK 209
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G + Y +I G+C G++++A + GF P + Y+ + L A+ + E
Sbjct: 210 GCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDV 269
Query: 532 YNLFRKI 538
LF ++
Sbjct: 270 EELFAEM 276
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 181/379 (47%), Gaps = 1/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +YN IV + R ++L M + V D+ T S ++DS R G + AI +
Sbjct: 192 DMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+E G+K + N ++ LC+ + L M + ++ NV+T+N+++ + K
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ E + KE++ G SP+ +T++ L++G R+ +A + D M C PD +
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++I Y V D+ MK ++ +S N TY+ L+ G +S K+ A E+F+EM+
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G++P T L+ LC G A+ +++ +K L + Y ++ + GK
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+L+ + G + Y +I+GLC G L A +++ + G P+ Y+ L
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 521 KLLASNKLESAYNLFRKIK 539
L L ++ L ++K
Sbjct: 552 AHLRDGDLTASAKLIEEMK 570
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 174/374 (46%), Gaps = 1/374 (0%)
Query: 172 ALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF 231
A+ R K F+ + + + G+ ++ TL+I+++ F R + A +LG++ G +
Sbjct: 97 AIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP 156
Query: 232 DAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVL 290
D + N ++ LC V A L + M + +++TYN +++G + G +L
Sbjct: 157 DTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDML 216
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
+++ D T+S +I+ L R G ID AI +F M+ KG YN+++
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
G +++ K M S PN+ T+ L+ +K K+ +A E+++EM+ RGI P+ T
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+ ++ C A M + C + + L++ + + ++ + +
Sbjct: 337 NTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK 396
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G ++ Y ++ G C G+++ A + +E + G P + Y L + L + KLE
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 456
Query: 531 AYNLFRKIKIARQN 544
A +F ++ ++ +
Sbjct: 457 ALEIFEDLQKSKMD 470
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 167/343 (48%), Gaps = 2/343 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ V +YN +V+ L + ++ +L DM + P++ T ++++D F++ G++ +A
Sbjct: 259 IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEAN 318
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ + G+ + + N ++ C + + A+++ + M + K +++T+ +I G+
Sbjct: 319 ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ +V + +V + I G +++T+S L++G ++G+I A E+F M G PD
Sbjct: 379 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y ++ G ++ ++ ++ + + + YT +I G+ K KV DA +F
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 498
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ +G+ P+ T T + LC G A ++ +K + G + Y L+R G
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
L EM+ G+ +D + VI L + G+L+ + L M
Sbjct: 559 LTASAKLIEEMKSCGFSADASSIKMVIDMLLS-GELDKSFLDM 600
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 151/357 (42%), Gaps = 12/357 (3%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDF--GLKFDAESLNVVLWCLCQR 246
M + + +L+ +V ++ G + +L + F + D S+ C +R
Sbjct: 2 MIQRSITTNLKAFRMVQPHLLKTGTLRT--DLLCTISSFLSSCERDFSSITNGNVCFRER 59
Query: 247 LHVGA-------ASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
L G A +LF M + + L ++ ++ S ++ Q + K++ G
Sbjct: 60 LRSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI 119
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
+ + T + +I R + A V + + G PDT +N +I+ G + +
Sbjct: 120 AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVV 179
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
M C+P+M TY +++G+ +S + A ++ +M +R + T ++ ++ LC
Sbjct: 180 LVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLC 239
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
G AA+ ++K+ G K S+ Y L+R L GK L +M +
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ ++ G+L+ A + +E + +G P+ + Y+ L + N+L A N+
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 86/211 (40%), Gaps = 7/211 (3%)
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
D+ + ++ M P + ++R S + ++++ L+ +++ GI + T+
Sbjct: 70 DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
+ C A + K K+G + T + L+ L GK + L M E+G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGC 189
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
D Y ++ G+C G A ++ + + YS + + L +++A +
Sbjct: 190 QPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 534 LFRKIK-------IARQNDYARRLWRSKGWH 557
LF++++ + N R L ++ W+
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280
>gi|357508583|ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499595|gb|AES80798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 184/403 (45%), Gaps = 7/403 (1%)
Query: 112 GKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVK 171
G I+ L + NV S ++V +V++R EA FF WA K P V+ Y+ ++
Sbjct: 114 GPYEIKQKLEDCNVKASSELVVEVLSRVRNDWEAAFTFFLWAGKQPGYDHSVREYHSMIS 173
Query: 172 ALGRRKFFDFMCNVLSDMAKEGVNPDL---ETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
LG+ + FD ++ +M + + +TL I++ + V +AI + F
Sbjct: 174 VLGKMRRFDTAWALVEEMRRGKTGESIVTPQTLLIMIRKYCAVHDVGRAINTFYAFKRFN 233
Query: 229 LKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKL-GQVVEME 287
+ +L LC+ +V A L K + ++NI+++GW L E
Sbjct: 234 FQVGLYEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLDTKSFNIILNGWCNLIVSARNAE 293
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
R+ +E+ D ++++ +I ++ ++ +++F+ MK++ PD YNAVI +
Sbjct: 294 RIWEEMSKRRIQHDVVSYASIISCYSKSSKLYRVLQLFEQMKKRNITPDRKVYNAVIFSL 353
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
E + M N P+ TY LI L K+RK+ +A E+F ML+RGI PS
Sbjct: 354 AKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIKPLCKARKIDEAKEIFNVMLERGISPSI 413
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T +F L + K +++GC ++ Y +L+R+ + + + +W+
Sbjct: 414 RTFHAFFRIL---RVKEEVFELLDKMKELGCNPTIETYIMLIRKFCRWRQLDEVKRIWNA 470
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
M+E G D Y +I GL ++E A E KGF P
Sbjct: 471 MREDGIGHDRSSYIVLIHGLFLNCKVEEAYKYYIEMQEKGFLP 513
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 186/404 (46%), Gaps = 6/404 (1%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
+L+ +A L F+ N + + N++V + FD + V+S+M K V PD+
Sbjct: 138 HLAADAYRLVFS-----SNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 192
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
T ++++D+ RAG A+ ++ + GLK + N VL LC+ A +F M
Sbjct: 193 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 252
Query: 260 KG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
V +V ++ I+I G+ ++G++ E ++ KE+ G PD ++FS LI R G++
Sbjct: 253 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 312
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
D A+ M+ G PD Y VI + G + ++ M C P++ TY L
Sbjct: 313 DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL 372
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
++GL K R++ DA + EM +RG+ P T T+ + C G A+ ++
Sbjct: 373 LNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 432
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ + Y L+ + G DLW +M + Y +I C GQ+E+A
Sbjct: 433 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFG 492
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
++E + KG P+ + Y+ + S + +K+ + +
Sbjct: 493 FLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 536
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 170/377 (45%), Gaps = 1/377 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
VA DV+S+ +++ R + + +M G+ PDL + S ++ F R G++ A+
Sbjct: 257 VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAM 316
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGW 277
L + FGL D +V+ C+ + A + + M G L +V+TYN +++G
Sbjct: 317 AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 376
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K ++++ E +L E+ G PD TF+ LI G G++D A+++FDTM + PD
Sbjct: 377 CKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDI 436
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I GD D+ + M S PN TY+ LI + +V DA +E
Sbjct: 437 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 496
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+++GI+P+ T S ++ C G +K L Y L+ K
Sbjct: 497 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 556
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L + M++ D Y +I G G ++ A + E+ KG P R Y
Sbjct: 557 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 616
Query: 518 LSNKLLASNKLESAYNL 534
+ N + + + A+ L
Sbjct: 617 MINGHVTAGNSKEAFQL 633
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 137/281 (48%), Gaps = 36/281 (12%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN ++ L + + +L++M + GV PDL T + ++ + G++ KA+Q+
Sbjct: 365 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 424
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF---------------- 265
+ + L+ D + N ++ +C++ + A+ L++ M + +F
Sbjct: 425 DTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 484
Query: 266 --------------------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
N+MTYN +I G+ + G V + ++ L++++ SPD +T+
Sbjct: 485 GQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITY 544
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LI G + ++ DA ++ + M+++ PD YN +I+ + G+ E ++ M +
Sbjct: 545 NTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCA 604
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
EP+ TY +I+G + + +A ++ +EML RG P
Sbjct: 605 KGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 146/359 (40%), Gaps = 36/359 (10%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++H + D+ S++ ++ RR D L +M G+ PD ++V+ F RAG
Sbjct: 287 MRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGL 346
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK------------- 260
+ A+++ + G D + N +L LC+ + A L N M+
Sbjct: 347 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 406
Query: 261 --------GKV-----LFNVM----------TYNIVISGWSKLGQVVEMERVLKEIVAEG 297
GK+ LF+ M TYN +I G + G + + + ++ +
Sbjct: 407 LIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE 466
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
P+ +T+S LI+ G+++DA D M KG P+ YN++I Y G+ +
Sbjct: 467 IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQ 526
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
K+ + M P++ TY LI G +K K+ DA ++ M + P T +
Sbjct: 527 KFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGF 586
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
+G A +++K G + Y ++ G L EM + G+ D
Sbjct: 587 SVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 185/391 (47%), Gaps = 36/391 (9%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
++ M + G P+ T V++ ++GQ A+++L ++E+ +K DA ++++ LC
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 245 QRLHVGAASSLFNSM------------------------------------KGKVLFNVM 268
+ + A +LFN M K K+ NV+
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
T++++I + K G++ E +++LKE++ G +P+++T++ LI+G + R+++AI++ D M
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
KGC PD +N +I+ Y D+ ++ ++ MS N TY L+ G +S K+
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A ++F+EM+ R + P + L+ LC G A+ ++ K K +L + Y ++
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ + K DL+ + G D Y +I+ LC L A ++ + +G
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGH 574
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P L Y+ L L + +A L ++K
Sbjct: 575 APDELTYNILIRAHLGDDDATTAAELIEEMK 605
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 191/398 (47%), Gaps = 7/398 (1%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+VL ++ +A + + ++++ R + + + + + K G PD + ++
Sbjct: 106 LVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLL 165
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVL 264
+ +V +A++++ R+ + G K +LN ++ LC V A L + M +
Sbjct: 166 NGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQ 225
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
N +TY V++ K GQ +L+++ D++ +S +I+GL + G +D+A +
Sbjct: 226 PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNL 285
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F+ M+ KG D YN +I + + G +D+ K + M PN+ T++ LI +K
Sbjct: 286 FNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
K+ +A ++ +EM+ RGI P+T T S ++ C A+ M GC +
Sbjct: 346 EGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMT 405
Query: 445 YKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ +L ++G+ K + L+L+ EM G ++ Y ++ G C G+LE A + +
Sbjct: 406 FNIL---INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
E + + P + Y L + L + +LE A +F KI+
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 172/345 (49%), Gaps = 2/345 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +YN ++ +D +L DM K ++P++ T S+++DSF++ G++ +A Q+L
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ G+ + + N ++ C+ + A + + M K ++MT+NI+I+G+ K
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
++ + + +E+ G +++T++ L++G ++G+++ A ++F M + PD +Y
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++ G+ ++ ++ + + E ++ Y +I G+ + KV DA ++F +
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G+ + LC A ++++K + G Y +L+R G
Sbjct: 537 KGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATT 596
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+L EM+ SG+P+D + VI L + G+L+ + L M + R
Sbjct: 597 AAELIEEMKSSGFPADVSTVKMVINMLSS-GELDKSFLDMLSTTR 640
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 133/288 (46%), Gaps = 1/288 (0%)
Query: 252 ASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A LF M + + L V+ +N + S +K Q + + K++ ++G + T S +I
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
R ++ A + + G PDT +N +++ E ++ M +P
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
+ T L++GL + KV+DA+ + + M++ G P+ T L +C G AM +
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
+K + KL Y +++ L G +L++EM+ G+ +D Y +I G CN
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G+ ++ ++ + +++ P+ + +S L + + KL A L +++
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 98/224 (43%)
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
+ DDA+++F M + P +N + S ++ + K M S ++ T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+I+ + RK++ A +++ G P T + L LC A+ + + ++
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G K +L L+ L GK + L M E+G+ + Y V+ +C GQ A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+ ++ + + + YS + + L L++A+NLF +++I
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 291
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 85/214 (39%), Gaps = 37/214 (17%)
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD-------------------- 400
+G S+++ + N+ +L SGL+ K DA+++F +M+
Sbjct: 44 RGFSTFS-DRNLSYRDKLSSGLV-GIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKT 101
Query: 401 ---------------RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+GI S T++ + C A K K+G + +
Sbjct: 102 KQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIF 161
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
LL L + L+L M E G+ ++ GLC G++ +AV++++ +
Sbjct: 162 NTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVE 221
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
GF P+ + Y + N + S + A L RK++
Sbjct: 222 TGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME 255
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 188/393 (47%), Gaps = 7/393 (1%)
Query: 149 FFNWAI--KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
F+N + K N+ +V S+N+I+K++ + D + +M PD T +MD
Sbjct: 165 FYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMD 224
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVL 264
+ ++ +A+ +L ++ G + NV++ LC++ + L ++M KG V
Sbjct: 225 GLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVP 284
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
N +TYN +I G G++ + +L +V+ P+ +T+ +I GL + GR D V
Sbjct: 285 -NEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARV 343
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
M+E+G + Y+ ++S G +E M+ +K C+ N Y+ L+ GL +
Sbjct: 344 LVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCR 403
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
RK +A+++ EM D+G P+ T +S ++ G H A+ ++K K+ C +
Sbjct: 404 DRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVC 463
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE-- 502
Y +L+ L GK + +W +M +G D Y +I GLC+ G +E A+ + E
Sbjct: 464 YSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEML 523
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
L P + Y+ L N L + + A +L
Sbjct: 524 CLEPDSQPDVITYNILFNALCKQSSISRAVDLL 556
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 123/291 (42%), Gaps = 38/291 (13%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ L + D ++L M P+ T +++ ++ G+ ++L +
Sbjct: 288 TYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLM 347
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN-SMKGKVLFNVMTYNIVISGWSKLGQV 283
E+ G + +V++ L + A LF SM N + Y+ ++ G + +
Sbjct: 348 EERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKP 407
Query: 284 VEMERVLKEIVAEGFSPDSLTFS-----------------------------------FL 308
E ++L E+ +G +P++ TFS L
Sbjct: 408 DEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVL 467
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY-- 366
I GL + G++ +A+ V+ M GC PD AY+++I G +E +K Y M
Sbjct: 468 IHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEP 527
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+ +P++ TY L + L K ++ A+++ MLDRG P T FL L
Sbjct: 528 DSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRML 578
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 117/263 (44%), Gaps = 4/263 (1%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
T+ +I ++ +E+VL + E +F + + G+A + AIE+F M
Sbjct: 74 TFYSLIENYAYSSDFNSLEKVLNRMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRM 133
Query: 329 K-EKGCGPDTNAYNAVISNYISVGDFDECMKYYK---GMSSYNCEPNMDTYTRLISGLLK 384
E C P ++N+V++ I G D +++Y G N PN+ ++ +I + K
Sbjct: 134 SFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCK 193
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
V +A+E+F EM R VP T + ++ LC A+ + + + GC S
Sbjct: 194 LGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPAT 253
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
+ +L+ L G + L M G + Y +I GLC G+L+ A+ +++ +
Sbjct: 254 FNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMV 313
Query: 505 RKGFCPSRLVYSKLSNKLLASNK 527
P+ + Y + N L+ +
Sbjct: 314 SSKCVPNEVTYGTIINGLVKQGR 336
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 110/276 (39%), Gaps = 57/276 (20%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y+ +V L R + D +LS+M +G P+ T S +M F G +KAI+
Sbjct: 394 YSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIE------ 447
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE 285
+W +++ N + Y+++I G K G+V+E
Sbjct: 448 --------------VWKDMTKINCAE--------------NEVCYSVLIHGLCKDGKVME 479
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK--EKGCGPDTNAYNAV 343
V +++A G PD + +S +I+GL AG +++A+++++ M E PD YN +
Sbjct: 480 AMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNIL 539
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT---------------------RLISGL 382
+ + M C+P++ T L+ L
Sbjct: 540 FNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLDELVVRL 599
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
LK ++ A ++ E ML + + P T + LC
Sbjct: 600 LKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELC 635
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 180/399 (45%), Gaps = 4/399 (1%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
RG + +A+ +F + + H + V +Y++++ A + + +L +M +G PD
Sbjct: 264 RGRIP-DALAVFDD--MLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPD 320
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ T ++++++ G V +A+ +L L G K DA + VL LC L
Sbjct: 321 IVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLA 380
Query: 258 SMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
M + +T+N +++ + G V V+ + G D +T+S +++GL G
Sbjct: 381 EMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVG 440
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
R+DDA+E+ +K GC PDT AY V+ S ++ + M +C P+ T+
Sbjct: 441 RVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFN 500
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+++ L + V A+ V E+M + G P T ++ LC+ AM + +
Sbjct: 501 TVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSC 560
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
GCK + + LL+ L G + L M S P D + VI LC G L A
Sbjct: 561 GCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQA 620
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ ++ G P+ YS + + LL + K ++A L
Sbjct: 621 IETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELL 659
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 192/411 (46%), Gaps = 18/411 (4%)
Query: 135 VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKAL---GRRKFFDFMCNVLSDMAK 191
+V RG + EA+VLF + A V N+++K L GR + + A
Sbjct: 160 LVQRGEID-EALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERV------FAA 212
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF--DAESLNVVLWCLCQRLHV 249
G + + T + +++ + RAG++ A +++ G+ F D + N ++ LC R +
Sbjct: 213 LGPSATVVTYNTMVNGYCRAGRIEDARRLIN-----GMPFPPDTFTFNPLIRALCVRGRI 267
Query: 250 GAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
A ++F+ M + +V+TY+I++ K + +L E+ A+G PD +T++ L
Sbjct: 268 PDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVL 327
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I + G +D+A+ + + GC PD Y V+ + + E + M+S NC
Sbjct: 328 INAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNC 387
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P+ T+ +++ L + V A+EV + M + G V T +S L+ LC G A+
Sbjct: 388 APDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVE 447
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ + + GCK AY +L+ L + +L EM S P D + V+A LC
Sbjct: 448 LLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLC 507
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G ++ A+ V+E+ G P + Y+ + + L + ++ A L ++
Sbjct: 508 QKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQ 558
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 166/360 (46%), Gaps = 20/360 (5%)
Query: 161 KDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
D +Y ++K L + ++ ++++M PD T + V+ S + G V +AI++
Sbjct: 459 PDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRV 518
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSK 279
+ ++ + G D + N ++ LC + A L + ++ +++T+N ++ G
Sbjct: 519 VEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCG 578
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
+ + + E+++ ++ PD LTF+ +I L + G + AIE M E GC P+++
Sbjct: 579 VDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSST 638
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y+ V+ + G ++ GM+ N P++ TY +IS L K+ K+ +AL++ M+
Sbjct: 639 YSIVVDALLKAGKAQAALELLSGMT--NGTPDLITYNTVISNLTKAGKMEEALDLLRVMV 696
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
G+ P T T S +C A+ M ++ + G T Y +L +
Sbjct: 697 SNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTD 756
Query: 460 MLLDLWHEMQESGYPSDGEIY----------------EYVIAGLCNIGQLENAVLVMEES 503
+ +D + M SG D Y + ++A LC++G L+ L+ EES
Sbjct: 757 LAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGVLDKK-LIEEES 815
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 168/422 (39%), Gaps = 48/422 (11%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N A D ++N IV +L ++ D V+ M++ G D+ T S ++D G+V A
Sbjct: 386 NCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDA 445
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------KGKVLFN----- 266
+++L RL+ +G K D + VL LC A L M +V FN
Sbjct: 446 VELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVAS 505
Query: 267 -------------------------VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
++TYN +I G + + +L ++ + G PD
Sbjct: 506 LCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPD 565
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+TF+ L++GL R +DA ++ M C PD +N VI++ G + ++ K
Sbjct: 566 IVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLK 625
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M+ C PN TY+ ++ LLK+ K ALE+ M + P T + + L G
Sbjct: 626 IMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAG 683
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC-----GMLLDLWHEMQESGYPSD 476
A+ + + G T Y+ L +G C + + +Q++G D
Sbjct: 684 KMEEALDLLRVMVSNGLCPDTTTYRSL-----AYGVCREDGTDRAVRMLRRVQDTGLSPD 738
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
Y V+ G C + + A+ + G P Y L L L+ A L
Sbjct: 739 TTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLA 798
Query: 537 KI 538
+
Sbjct: 799 SL 800
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 106/247 (42%), Gaps = 36/247 (14%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N D ++N ++ +L ++ L MA+ G P+ T SIV+D+ ++AG+ A
Sbjct: 596 NCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAA 655
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGW 277
+++L S + N +++TYN VIS
Sbjct: 656 LELL-------------------------------SGMTNGTP-----DLITYNTVISNL 679
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+K G++ E +L+ +V+ G PD+ T+ L G+ R D A+ + +++ G PDT
Sbjct: 680 TKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDT 739
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN V+ + D + + M S C P+ TY L+ L + +A +
Sbjct: 740 TFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLAS 799
Query: 398 MLDRGIV 404
+ G++
Sbjct: 800 LCSLGVL 806
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 97/257 (37%), Gaps = 37/257 (14%)
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKG---C-----------------------------GPD 336
+ L + G ID+A+ +FD+M G C GP
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPS 216
Query: 337 TN--AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
YN +++ Y G ++ + GM P+ T+ LI L ++ DAL V
Sbjct: 217 ATVVTYNTMVNGYCRAGRIEDARRLINGMPF---PPDTFTFNPLIRALCVRGRIPDALAV 273
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F++ML RG PS T + L+ C AM + + R GC+ + Y +L+ +
Sbjct: 274 FDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCN 333
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G L++ + G D Y V+ LC + + ++ E P +
Sbjct: 334 EGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVT 393
Query: 515 YSKLSNKLLASNKLESA 531
++ + L ++ A
Sbjct: 394 FNTIVTSLCQQGLVDRA 410
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 200/440 (45%), Gaps = 45/440 (10%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
+ L EAM L + + N + +NV++ L R V M + PD
Sbjct: 92 KARLLDEAMGLLLDMKSRGMNPGTLL--HNVVIGGLCRAGRLRHALGVYRQM-NDAHPPD 148
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
T + ++ +AG++ A+Q+L + D +L VV+ LC V A L
Sbjct: 149 FLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVE 208
Query: 258 SMKGK-VLFNVMTYNIVISGWSKLGQVVE-MERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
M + + N +TY+ ++ G K ++ E + +L E+ GF+PD +T+S +I+GL +A
Sbjct: 209 EMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKA 268
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
GR+ DA+++F+ M C P YN++I Y GD DE ++ M NC P++ TY
Sbjct: 269 GRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITY 325
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
T L+S K ++ DA E+F++M+ + P T TS ++ LC G A+ + ++ +
Sbjct: 326 TTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITR 385
Query: 436 VGCKLSLTAYKLLLR------------------RLSGF-----------------GKCGM 460
GC ++ Y ++ R GF G+
Sbjct: 386 RGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQ 445
Query: 461 LLDLWHEMQESGYPSDGEI--YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
L ++ G P + Y ++ LC G+ ++AV EE +++G+ P+ ++ +
Sbjct: 446 ALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATV 505
Query: 519 SNKLLASNKLESAYNLFRKI 538
L +++ + A+ L ++
Sbjct: 506 VFALCKAHQPQQAHELLEEM 525
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 168/375 (44%), Gaps = 8/375 (2%)
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
G L VL + +H D + V+V++L D ++ +M G+ +
Sbjct: 163 GRLRDAVQVLQEMVSARH---VPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANA 219
Query: 199 ETLSIVMDSFIRAGQVYKAIQML-GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
T S ++D + ++ +A+ +L G + G D + + V+ LC+ + A +F
Sbjct: 220 ITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE 279
Query: 258 SMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
M +TYN +I G+ + G + E R+L ++V + +PD +T++ L+ + GR
Sbjct: 280 EMS--CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGR 337
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
+DDA E+F M PD + +++ G ++ ++ + ++ C P + TY
Sbjct: 338 LDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNC 397
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
++ G KS +V A E+ + RG VP+T T + C G A+ + G
Sbjct: 398 VVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG 457
Query: 438 --CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
C S+ Y ++L L G+ + + EM + GY + V+ LC Q +
Sbjct: 458 GPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQ 517
Query: 496 AVLVMEESLRKGFCP 510
A ++EE ++ G P
Sbjct: 518 AHELLEEMIKYGHTP 532
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 157/352 (44%), Gaps = 6/352 (1%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQV-YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
M G D T ++V+ + ++ + +L + D GL D LN +L LC
Sbjct: 1 MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60
Query: 248 HVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
A +LF+ M N TY +I K + E +L ++ + G +P +L +
Sbjct: 61 DTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNV 120
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
+I GL RAGR+ A+ V+ M + PD Y ++ G + ++ + M S
Sbjct: 121 VIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSAR 179
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP-PHAA 426
P+ T T ++ L +V DA E+ EEML RG+ + T ++ ++ LC A
Sbjct: 180 HVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAV 239
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
++ + + G + Y ++ L G+ +D++ EM S P+ Y +I G
Sbjct: 240 ALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM--SCAPT-AITYNSLIGG 296
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
C G ++ A+ ++ + + P + Y+ L + +L+ AY LF+++
Sbjct: 297 YCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQM 348
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 130/288 (45%), Gaps = 10/288 (3%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ A +YN ++ R D +L M + PD+ T + +M +F + G++ A
Sbjct: 282 SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDA 341
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
++ ++ L D + ++ LC + A L + + + TYN V+ G
Sbjct: 342 YELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDG 401
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG--CG 334
+ K QV + E ++ + + GF P+++T++ L+ G RAGR D A++ D + +G C
Sbjct: 402 YCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCP 461
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
Y ++ G D+ +++Y+ M P T+ ++ L K+ + A E+
Sbjct: 462 TSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHEL 521
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
EEM+ G P GT + + C G M +KA ++ +L L
Sbjct: 522 LEEMIKYGHTPGPGTCDAVVSAYCRAG-------MIQKADELASELRL 562
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 193/392 (49%), Gaps = 3/392 (0%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F + ++H VA +V +YN++V+AL R + V+ DM G P+ T + ++ +F
Sbjct: 139 FLSSMLRH-GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAF 197
Query: 209 IRAGQVYKAIQMLGRLEDFG-LKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-N 266
RAG++ A +++ + + G K + + N ++ LC+ + A +F+ M + L +
Sbjct: 198 CRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPD 257
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V++YN ++SG+ K+G + E V E+ G PD +TF+ LI +AG ++ A+ +
Sbjct: 258 VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVA 317
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M+E+G + + A+I + G D+ + + M +P++ Y LI+G K
Sbjct: 318 QMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLG 377
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
++ A E+ EM + + P T ++ + C G +A + +K K G Y
Sbjct: 378 RMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYS 437
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+R L + +L+ M + G D Y +I G C G +E A+ + +E +RK
Sbjct: 438 SLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK 497
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P + YS L N L S + + A+ L K+
Sbjct: 498 GVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 168/332 (50%), Gaps = 3/332 (0%)
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVIS 275
A + L + G+ + + N+++ LC R + A + M+G N +TYN +++
Sbjct: 136 ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVA 195
Query: 276 GWSKLGQVVEMERVLKEIVAEGFS-PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+ + G++ ERV+ + EG + P+ +TF+ ++ GL +AGR++ A +VFD M +G
Sbjct: 196 AFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLA 255
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD +YN ++S Y VG E + + M+ P++ T+T LI K+ + A+ +
Sbjct: 256 PDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVAL 315
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+M +RG+ + T T+ ++ C G A++ ++ RK G + S+ Y L+
Sbjct: 316 VAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCK 375
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G+ + +L EM+ D Y +I+G C +G L++A + ++ L+KG P +
Sbjct: 376 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 435
Query: 515 YSKLSNKLLASNKLESAYNLFRK-IKIARQND 545
YS L L +L A LF +++ Q D
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPD 467
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 180/371 (48%), Gaps = 20/371 (5%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+A DV SYN ++ + V S+M + G+ PD+ T + ++ + +AG + +A+
Sbjct: 254 LAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAV 313
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ ++ + GL+ + + ++ C++ + A M K + +V+ YN +I+G+
Sbjct: 314 ALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGY 373
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
KLG++ +++E+ A+ PD +T+S +I G + G +D A ++ M +KG PD
Sbjct: 374 CKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDA 433
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y+++I ++ + ++ M +P+ TYT LI G K V AL + +E
Sbjct: 434 ITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDE 493
Query: 398 MLDRGIVPSTGTITSFLEPLC-SYGPPHAAMMMYK-------------KARKVGCKLSLT 443
M+ +G++P T + + L S A +++K A + C S
Sbjct: 494 MIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCC--SKA 551
Query: 444 AYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+K ++ L GF G++ + ++ M + + DG +Y +I G C G + A+
Sbjct: 552 EFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFH 611
Query: 501 EESLRKGFCPS 511
++ LR GF P+
Sbjct: 612 KQMLRSGFSPN 622
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 134/278 (48%), Gaps = 2/278 (0%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V YN V+ S + R L ++ G +P+ T++ L+ L GR+++A+ V
Sbjct: 117 SVPAYNAVLLALSD-ASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVV 175
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY-NCEPNMDTYTRLISGLLK 384
M+ GC P+ YN +++ + G+ D + M N +PN+ T+ +++GL K
Sbjct: 176 GDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCK 235
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+ ++ A +VF+EM+ G+ P + + L C G H ++ ++ + + G +
Sbjct: 236 AGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVT 295
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
+ L+ G + L +M+E G + + +I G C G L++A+L +EE
Sbjct: 296 FTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMR 355
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+ G PS + Y+ L N +++ A L R+++ R
Sbjct: 356 KCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 177/375 (47%), Gaps = 2/375 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ AL + D V M GV PD T ++ + SF G+ + A+++L L
Sbjct: 108 AYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSL 167
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
+ G + V+ L H A LF+ M G+ +F +V T+N V+ + G V
Sbjct: 168 SERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDV 227
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+E +L +++ G S + T + I GL GR+++A+ + + M PD YN +
Sbjct: 228 MESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTL 286
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ E +Y M + C P+ TY +I G KS + +A E+ ++ + +G
Sbjct: 287 MRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGF 346
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
VP T S + LC+ G A+ ++ +A+ K L Y L++ L G L
Sbjct: 347 VPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQ 406
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ +EM E G D Y +I GLC +G + +A +VM +++ KG+ P ++ L +
Sbjct: 407 VMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYC 466
Query: 524 ASNKLESAYNLFRKI 538
KL+SA L ++
Sbjct: 467 KRLKLDSALQLVERM 481
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 169/368 (45%), Gaps = 1/368 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ + +L D +G PD T +++ G + +A+++
Sbjct: 317 TYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEA 376
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
+ LK D N ++ LC++ + A + N M + ++ TYNI+I+G K+G +
Sbjct: 377 QAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNI 436
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ V+ + + +G+ PD TF+ LI+G + ++D A+++ + M G PD YN+V
Sbjct: 437 SDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSV 496
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
++ G E + ++ M C PN TY LI K ++ +A V M G+
Sbjct: 497 LNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGL 556
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
VP + + + C G A ++++K + G + + +L+ S M
Sbjct: 557 VPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEK 616
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
++ EM GY D Y ++ GLC ++ A + E + KGF PS + ++ N L
Sbjct: 617 IFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLA 676
Query: 524 ASNKLESA 531
++++ A
Sbjct: 677 MNHRVSEA 684
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 181/382 (47%), Gaps = 2/382 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+V DV ++N ++ AL ++ +L+ + K G++ + T +I + G++ +A
Sbjct: 206 DVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEA 265
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
+ ++ R+ + + D + N ++ LC+ V A+ M + + + TYN +I G
Sbjct: 266 VALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDG 324
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K G + E +LK+ V +GF PD +T+ LI GL G I+ A+E+F+ + K PD
Sbjct: 325 YCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPD 384
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN+++ G ++ M C P++ TY +I+GL K ++DA V
Sbjct: 385 LVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMN 444
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+ + +G +P T + ++ C +A+ + ++ G + Y +L L G
Sbjct: 445 DAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAG 504
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K + + + EM G + Y +I C I QLE A V+ + G P + ++
Sbjct: 505 KAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFN 564
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
L + + L+ AY LF+K+
Sbjct: 565 TLIHGFCRNGDLDGAYLLFQKL 586
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 170/375 (45%), Gaps = 1/375 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
VA DV +YN +++ L + L M +G PD T + ++D + ++G + +A
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEAT 335
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
++L G D + ++ LC + A LFN + K L +++ YN ++ G
Sbjct: 336 ELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGL 395
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G ++ +V+ E+V EG PD T++ +I GL + G I DA V + KG PD
Sbjct: 396 CRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDV 455
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+N +I Y D ++ + M +Y P++ TY +++GL K+ K + E FEE
Sbjct: 456 FTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEE 515
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ +G P+ T +E C A + + + G ++ L+ G
Sbjct: 516 MILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGD 575
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L+ ++ E GY + + + +I + ++ A + E + KG+ P Y
Sbjct: 576 LDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRI 635
Query: 518 LSNKLLASNKLESAY 532
L + L + ++ AY
Sbjct: 636 LVDGLCKAANVDRAY 650
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 128/286 (44%), Gaps = 40/286 (13%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HP D+ +YN+I+ L + V++D +G PD+ T + ++D + + ++
Sbjct: 417 HP----DIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLD 472
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
A+Q++ R+ +G+ D + N VL LC+ + F M K N +TYNI+I
Sbjct: 473 SALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILI 532
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+ K+ Q+ E V+ + +G PD+++F+ LI G R G +D A +F + EKG
Sbjct: 533 ENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYS 592
Query: 335 PDTNAYNAVISNYIS-----------------------------------VGDFDECMKY 359
+ +N +I Y S + D +
Sbjct: 593 ATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAH 652
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
M S P+M T+ R+++ L + +V++A+ + M+ G+VP
Sbjct: 653 LAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVP 698
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 111/313 (35%), Gaps = 71/313 (22%)
Query: 298 FSPDSLTFSFL--IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+PDSL ++ I+ RAGR+ A++ F+ M C P AYNA++ ++ D+
Sbjct: 65 LAPDSLQPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQ 124
Query: 356 CMKYY-----------------------------------KGMSSYNCEPNMDTYTRLIS 380
K Y + +S C+ Y ++
Sbjct: 125 AHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVR 184
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK-------A 433
GL +A +F+EML R + P T + L LC G + + K A
Sbjct: 185 GLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSA 244
Query: 434 RKVGCKL---------------------------SLTAYKLLLRRLSGFGKCGMLLDLWH 466
K C + + Y L+R L K
Sbjct: 245 NKFTCNIWIRGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLG 304
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
M G D Y +I G C G L+ A ++++++ KGF P R+ Y L N L A
Sbjct: 305 RMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEG 364
Query: 527 KLESAYNLFRKIK 539
+E A LF + +
Sbjct: 365 DIERALELFNEAQ 377
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 95/237 (40%), Gaps = 3/237 (1%)
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT--NAYNAVISNYISVGDFDECMKYYK 361
+ LI L AGR+DD + + PD+ Y A I Y G + ++
Sbjct: 37 AYRALIRELVSAGRLDDVDAALASARSH-LAPDSLQPLYVASIQAYARAGRLRAAVDAFE 95
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M + C P Y ++ L+ + A +V+ ML G+ P T T L+ C G
Sbjct: 96 RMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTG 155
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
PH A+ + + + GC AY ++R L G L+ EM D +
Sbjct: 156 RPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFN 215
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
V+ LC G + + ++ + L++G ++ + L +LE A L ++
Sbjct: 216 NVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM 272
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 83/174 (47%), Gaps = 1/174 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN++++ + + V+ M ++G+ PD + + ++ F R G + A + +L
Sbjct: 527 TYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKL 586
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
++ G A++ N+++ +L++ A +F M K ++ TY I++ G K V
Sbjct: 587 DEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANV 646
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
L E++++GF P TF ++ L R+ +A+ + M G P+
Sbjct: 647 DRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEV 700
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 193/457 (42%), Gaps = 54/457 (11%)
Query: 115 VIEDALWNVN-VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKAL 173
++ + L NVN V L V+ ++ RG + D+ +Y ++K L
Sbjct: 136 ILLNCLCNVNRVGEGLAVMAGILRRGYIP-------------------DIVTYTTLIKGL 176
Query: 174 GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI----QMLGRLEDFGL 229
+ + M K G P+ T +M R G + A+ +ML +G+
Sbjct: 177 CMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGI 236
Query: 230 KFDAE--SLNVVLWCLCQRLHVGAASSLFNSMK------------------GKVLFN--- 266
F S ++++ LC+ A LF MK K LFN
Sbjct: 237 NFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEMV 296
Query: 267 -------VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
V+T+N++I K G+V+E + +L+ ++ G P+ LT++ LIEG G ++
Sbjct: 297 NQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLN 356
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
A E+F +M KGC PD Y +I+ Y +E MK Y GM P++ TY L+
Sbjct: 357 SARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALL 416
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
+GL + KV DA ++F M GI FL LC G AM ++ K + K
Sbjct: 417 TGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIK 476
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
L + + L+ L GK +L+ ++ + D Y +I C GQ+ A ++
Sbjct: 477 LDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANIL 536
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
++ + G P ++ Y+ L S KLE L
Sbjct: 537 FQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLH 573
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 174/378 (46%), Gaps = 14/378 (3%)
Query: 109 KLKGKGVIEDALWNVN---VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
KL + + + +L+ +N V +S ++ + + EA LF ++ + V S
Sbjct: 222 KLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQ--GMTPTVIS 279
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y ++ +R F ++M +GV P++ T ++++D + G+V +A +L +
Sbjct: 280 YTSLMWEEAKRLF--------NEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMI 331
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
G+ + + N ++ C + +A LF SM K +V+ Y ++I+G+ K +V
Sbjct: 332 QRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVE 391
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E ++ ++ G PD T+ L+ GL + G++ DA ++F MK G D Y +
Sbjct: 392 EAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFL 451
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ G E M+ + + SYN + +++ + LI GL K+ K+ A E+FE++ +
Sbjct: 452 NGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQ 511
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P T + C G A ++++K K GC Y L+R K +++L
Sbjct: 512 PDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVEL 571
Query: 465 WHEMQESGYPSDGEIYEY 482
H M + D I +
Sbjct: 572 LHMMVQRDVSLDVNILRH 589
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 163/387 (42%), Gaps = 50/387 (12%)
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
P L + + ++ + + + ++ G+ D +LN++L CLC VG +
Sbjct: 93 TPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLA 152
Query: 255 LFNSM--------------------------KGKVLF----------NVMTYNIVISGWS 278
+ + K +LF N +TY ++ G
Sbjct: 153 VMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLC 212
Query: 279 KLGQVVEMERVLKEIVAE------GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+ G + ++ +E++ + F P +++S +I+ L + R D+A ++F+ MK +G
Sbjct: 213 RTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQG 272
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P +Y +++ ++E + + M + +PN+ T+ LI L K KV +A
Sbjct: 273 MTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAK 324
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
++ E M+ RGIVP+ T S +E C G ++A ++ GC+ + Y +L+
Sbjct: 325 DLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGY 384
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
K + L++ M + G D + Y ++ GL G++ +A + G
Sbjct: 385 CKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDL 444
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKIK 539
+Y N L + L A LF K+K
Sbjct: 445 YIYGIFLNGLCKNGCLFEAMELFNKLK 471
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 136/327 (41%), Gaps = 34/327 (10%)
Query: 248 HVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
H L+N M+ + + T NI+++ + +V E V+ I+ G+ PD +T++
Sbjct: 111 HYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYT 170
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM--- 363
LI+GL RI A +F M++ GC P+ Y ++ G+ +K ++ M
Sbjct: 171 TLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLND 230
Query: 364 -SSY--NCEPNMDTYTRLISGLLKSRKVADALEVFEEM---------------------- 398
S Y N +P + +Y+ +I L K R+ +A ++FEEM
Sbjct: 231 SSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAKR 290
Query: 399 -----LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+++G+ P+ T ++ LC G A + + + G +L Y L+
Sbjct: 291 LFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFC 350
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
G +L+ M G D Y +I G C ++E A+ + L+ G P
Sbjct: 351 LVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVK 410
Query: 514 VYSKLSNKLLASNKLESAYNLFRKIKI 540
Y L L K+ A LF +K+
Sbjct: 411 TYGALLTGLFQGGKVGDAKKLFGVMKV 437
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 6/205 (2%)
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
A + F M P +++ ++S + + + Y M P+ T L+
Sbjct: 79 QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
+ L +V + L V +L RG +P T T+ ++ LC A +++ + +K+GC
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEM--QESGYPSDGEI----YEYVIAGLCNIGQL 493
+ Y L++ L G + L L EM S Y + + Y +I LC +
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKL 518
+ A + EE +G P+ + Y+ L
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSL 283
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 90/223 (40%), Gaps = 14/223 (6%)
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
+N N ++ F +++ M N P + ++T L+SGL K + + ++ +M
Sbjct: 68 HNCKTGNITAIQAF----QFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMR 123
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
GI P T+ L LC+ + + + G + Y L++ L +
Sbjct: 124 LSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRIS 183
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK------GFCPSRL 513
L+ MQ+ G + Y ++ GLC G + A+ + +E L F P +
Sbjct: 184 KAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVI 243
Query: 514 VYSKLSNKLLASNKLESAYNLFRKIKIARQN----DYARRLWR 552
YS + + L + + A +LF ++K+ Y +W
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWE 286
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 205/427 (48%), Gaps = 5/427 (1%)
Query: 115 VIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKH-PNVAKDVKSYNVIVKAL 173
+ +AL + + ++V K + R G +LFF +H P+ S++ V
Sbjct: 52 TLSEALTKPRIHWTPELVNKTLKRLWNHGPKALLFFKHLDRHLPSYTHSPSSFDHAVDIA 111
Query: 174 GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA 233
R + F+ ++ M + P +TL+I+ + + G+ ++A++ + + GL D
Sbjct: 112 ARMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASIGKPHRAVRTFLSMHEHGLHQDL 171
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
S N +L LC+ V A L ++K + + ++YNI+ +G+ + RVLKE+
Sbjct: 172 HSFNTLLDILCKSNRVETAHDLLRTLKSRFRPDTVSYNILANGYCLKKRTPMALRVLKEM 231
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
V G P +T++ +++G R+ +I +A E + MK++ C D +Y VI + G+
Sbjct: 232 VQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEV 291
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV-PSTGTITS 412
+ + + M PN+ TY LI K V +A+ VFEEM+ G+ P+ T
Sbjct: 292 KKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVTFNV 351
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
+ LC G A+ ++ + G + S+ Y +++R G+ L+++ +M +
Sbjct: 352 VIRGLCHVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKMGDGL 411
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVL---VMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
+ + Y +I+ + + E+ V+ ++ E + +GF P + ++++ N L+ + +
Sbjct: 412 CLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFTFNRVLNGLVITGNQD 471
Query: 530 SAYNLFR 536
A ++ R
Sbjct: 472 FAKDILR 478
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 75/179 (41%), Gaps = 3/179 (1%)
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
+ + SY P+ ++ + + R A + M + PS T+ E S
Sbjct: 92 RHLPSYTHSPS--SFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASI 149
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
G PH A+ + + G L ++ LL L + DL ++ S + D Y
Sbjct: 150 GKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLK-SRFRPDTVSY 208
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ G C + A+ V++E +++G P+ + Y+ + SN+++ A+ + ++K
Sbjct: 209 NILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMK 267
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 193/392 (49%), Gaps = 3/392 (0%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F + ++H VA +V +YN++V+AL R + V+ DM G P+ T + ++ +F
Sbjct: 139 FLSSMLRH-GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAF 197
Query: 209 IRAGQVYKAIQMLGRLEDFG-LKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-N 266
RAG++ A +++ + + G K + + N ++ LC+ + A +F+ M + L +
Sbjct: 198 CRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPD 257
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V++YN ++SG+ K+G + E V E+ G PD +TF+ LI +AG ++ A+ +
Sbjct: 258 VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVA 317
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M+E+G + + A+I + G D+ + + M +P++ Y LI+G K
Sbjct: 318 QMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLG 377
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
++ A E+ EM + + P T ++ + C G +A + +K K G Y
Sbjct: 378 RMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYS 437
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+R L + +L+ M + G D Y +I G C G +E A+ + +E +RK
Sbjct: 438 SLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK 497
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P + YS L N L S + + A+ L K+
Sbjct: 498 GVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 164/321 (51%), Gaps = 3/321 (0%)
Query: 228 GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEM 286
G+ + + N+++ LC R + A + M+G N +TYN +++ + + G++
Sbjct: 147 GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 206
Query: 287 ERVLKEIVAEGFS-PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
ERV+ + EG + P+ +TF+ ++ GL +AGR++ A +VFD M +G PD +YN ++S
Sbjct: 207 ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 266
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
Y VG E + + M+ P++ T+T LI K+ + A+ + +M +RG+
Sbjct: 267 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 326
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
+ T T+ ++ C G A++ ++ RK G + S+ Y L+ G+ + +L
Sbjct: 327 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 386
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
EM+ D Y +I+G C +G L++A + ++ L+KG P + YS L L
Sbjct: 387 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 446
Query: 526 NKLESAYNLFRK-IKIARQND 545
+L A LF +++ Q D
Sbjct: 447 KRLNDACELFENMLQLGVQPD 467
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 180/371 (48%), Gaps = 20/371 (5%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+A DV SYN ++ + V S+M + G+ PD+ T + ++ + +AG + +A+
Sbjct: 254 LAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAV 313
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ ++ + GL+ + + ++ C++ + A M K + +V+ YN +I+G+
Sbjct: 314 ALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGY 373
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
KLG++ +++E+ A+ PD +T+S +I G + G +D A ++ M +KG PD
Sbjct: 374 CKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDA 433
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y+++I ++ + ++ M +P+ TYT LI G K V AL + +E
Sbjct: 434 ITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDE 493
Query: 398 MLDRGIVPSTGTITSFLEPLC-SYGPPHAAMMMYK-------------KARKVGCKLSLT 443
M+ +G++P T + + L S A +++K A + C S
Sbjct: 494 MIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCC--SKA 551
Query: 444 AYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+K ++ L GF G++ + ++ M + + DG +Y +I G C G + A+
Sbjct: 552 EFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFH 611
Query: 501 EESLRKGFCPS 511
++ LR GF P+
Sbjct: 612 KQMLRSGFSPN 622
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 134/278 (48%), Gaps = 2/278 (0%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V YN V+ S + R L ++ G +P+ T++ L+ L GR+++A+ V
Sbjct: 117 SVPAYNAVLLALSD-ASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVV 175
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY-NCEPNMDTYTRLISGLLK 384
M+ GC P+ YN +++ + G+ D + M N +PN+ T+ +++GL K
Sbjct: 176 GDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCK 235
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+ ++ A +VF+EM+ G+ P + + L C G H ++ ++ + + G +
Sbjct: 236 AGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVT 295
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
+ L+ G + L +M+E G + + +I G C G L++A+L +EE
Sbjct: 296 FTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMR 355
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+ G PS + Y+ L N +++ A L R+++ R
Sbjct: 356 KCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 192/415 (46%), Gaps = 38/415 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV--NPDLETLSIVMDSFIRAGQVYKAIQ 219
DV SY++++K+L + ++L MA+ G +PD+ + V+D F + G V KA
Sbjct: 185 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACD 244
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
+ + G+ D + + V+ LC+ +G A + M K VL + TYN +I G+S
Sbjct: 245 LFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYS 304
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK--------- 329
GQ E RV KE+ PD +T + L+ L + G+I +A +VFDTM
Sbjct: 305 STGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 364
Query: 330 ----------EKGC----------------GPDTNAYNAVISNYISVGDFDECMKYYKGM 363
KGC PD ++ +I Y + G D+ M + M
Sbjct: 365 SYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEM 424
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ +P++ TYT +I+ L + K+ DA+E F +M+D+G+ P ++ C++G
Sbjct: 425 RDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSL 484
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A + + G +L + + ++ L G+ +++ G D +Y +
Sbjct: 485 LKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSML 544
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ G C +G++E A+ V + + G P+ +VY L N +++ +LFR++
Sbjct: 545 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREM 599
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 182/382 (47%), Gaps = 3/382 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D+ +Y+ +V AL + + L M +GV PD T + ++ + GQ +A+
Sbjct: 254 IPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAV 313
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
++ + + D +LN+++ LC+ + A +F++M KG+ +V +Y I+++G
Sbjct: 314 RVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNP-DVFSYKIMLNG 372
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
++ G +V+M + ++ +G +PD TFS LI+ G +D A+ +F+ M++ G PD
Sbjct: 373 YATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPD 432
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y VI+ +G D+ M+ + M P+ Y LI G + A E+
Sbjct: 433 VVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELIL 492
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
E+++ G+ +S + LC G A ++ VG Y +L+ G
Sbjct: 493 EIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVG 552
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K L ++ M +G + +Y ++ G C IG+++ + + E L+KG PS ++Y+
Sbjct: 553 KMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYN 612
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
+ + L + + A F ++
Sbjct: 613 IIIDGLFVAGRTVPAKVKFHEM 634
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 175/371 (47%), Gaps = 9/371 (2%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA +F A+K N DV SY +++ + M ++ M +G+ PD+ T S+
Sbjct: 346 EARDVFDTMAMKGQN--PDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSV 403
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
++ ++ G + KA+ + + D G+K D + V+ LC+ + A FN M +
Sbjct: 404 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQG 463
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
V + Y+ +I G+ G +++ + ++ EI+ G D + FS +I L + GRI DA
Sbjct: 464 VAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQ 523
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+FD G PD Y+ ++ Y VG ++ ++ + M S EPN+ Y L++G
Sbjct: 524 NIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGY 583
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K ++ + L +F EML +GI PST ++ L G A + + + + G ++
Sbjct: 584 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINK 643
Query: 443 TAYKLLLRRLSGF--GKC-GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
Y ++LR GF +C + L+ E++ D +IAG+ ++E A +
Sbjct: 644 CTYNIVLR---GFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 700
Query: 500 MEESLRKGFCP 510
R G P
Sbjct: 701 FASISRSGLVP 711
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 158/350 (45%), Gaps = 6/350 (1%)
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVL--WCLCQRLHVGA 251
++P T +I+MD RA + A+ G+L GL+ D N +L +C +R
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 170
Query: 252 ASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG---FSPDSLTFSFL 308
L + + + +V +Y+I++ G+ + + +L+ ++AEG SPD + ++ +
Sbjct: 171 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR-MMAEGGAVCSPDVVAYTTV 229
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I+ + G ++ A ++F M ++G PD Y++V+ + + + M +
Sbjct: 230 IDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGV 289
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P+ TY LI G + + +A+ VF+EM I+P T+ + LC YG A
Sbjct: 290 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARD 349
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++ G + +YK++L + G + DL+ M G D + +I
Sbjct: 350 VFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYA 409
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
N G L+ A+++ E G P + Y+ + L K++ A F ++
Sbjct: 410 NCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQM 459
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 138/303 (45%), Gaps = 38/303 (12%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+AM++F N H V DV +Y ++ AL R D + M +GV PD
Sbjct: 416 KAMIIF-NEMRDH-GVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 473
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS----- 258
++ F G + KA +++ + + G++ D + ++ LC+ + A ++F+
Sbjct: 474 LIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVG 533
Query: 259 -----------MKGKVLF--------------------NVMTYNIVISGWSKLGQVVEME 287
M G L NV+ Y +++G+ K+G++ E
Sbjct: 534 QHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGL 593
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
+ +E++ +G P ++ ++ +I+GL AGR A F M E G + YN V+ +
Sbjct: 594 SLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGF 653
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
FDE + +K + + N + ++ T +I+G+ ++R+V +A ++F + G+VP
Sbjct: 654 FKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCV 713
Query: 408 GTI 410
T+
Sbjct: 714 VTV 716
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 185/421 (43%), Gaps = 44/421 (10%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PNV +YN ++ L + D + M +P + T + ++D R G++
Sbjct: 7 EPNVV----TYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLE 62
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVIS 275
+A+ + + D D S N+++ LC+ + A F M + NV+TY+++I
Sbjct: 63 RAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLID 121
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G K +V + +L+ + A G SPD +T++ L++GL + ++ A EV M + GC P
Sbjct: 122 GLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVP 181
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+ YN+++ + + + M+ C PN+ TY LI GL K +V DA +
Sbjct: 182 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 241
Query: 396 EEMLDR-----------------------------------GIVPSTGTITSFLEPLCSY 420
+M+D+ GI P T +S + LC
Sbjct: 242 ADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS 301
Query: 421 GPPHAA--MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
A +++Y K+R GC + Y L+ L GK DL+ M G +D
Sbjct: 302 NRLDEACRLLLYVKSR--GCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVV 359
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y +I GLC G+++ A L++ +R G PS + Y+ L L N L+ A L ++
Sbjct: 360 TYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 419
Query: 539 K 539
+
Sbjct: 420 E 420
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 185/388 (47%), Gaps = 5/388 (1%)
Query: 145 AMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIV 204
AM LF + + DV S+N++V L R + M + +P++ T S++
Sbjct: 64 AMALFQEMLDRR---SHDVISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNVITYSVL 119
Query: 205 MDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKV 263
+D +A +V +A+++L ++ G D + +++ LC+ V AA + M
Sbjct: 120 IDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGC 179
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+ N++TYN ++ G + +V + +++++ G +P+ +T+ LI+GL + GR+ DA
Sbjct: 180 VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACA 239
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+ M +KG PD YN +I+ DE + + S +P++ TY+ +I GL
Sbjct: 240 MLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLC 299
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
+S ++ +A + + RG P ++ ++ LC G A +Y+ GC +
Sbjct: 300 RSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVV 359
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
Y L+ L G+ L M G P Y +I GLC++ L+ A+ ++EE
Sbjct: 360 TYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 419
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESA 531
R PS + Y+ L + + +++SA
Sbjct: 420 ERSNCAPSAVTYNILIHGMCRMERVDSA 447
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 179/378 (47%), Gaps = 2/378 (0%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
+ +V +Y+V++ L + +L M G +PD+ T +I++D + +V A +
Sbjct: 110 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWE 169
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
+L + D G + + N +L LC+ V A +L M + NV+TY +I G
Sbjct: 170 VLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLC 229
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K+G+V + +L +++ +G +PD + ++ LI GL +A ++D++I + G PD
Sbjct: 230 KVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVV 289
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
Y++VI DE + + S C P++ Y+ LI GL K+ KV +A +++E M
Sbjct: 290 TYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVM 349
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
G T ++ ++ LC G A ++ + ++G S Y L++ L
Sbjct: 350 TGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHL 409
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL-VMEESLRKGFCPSRLVYSK 517
++L EM+ S Y +I G+C + ++++A L +E + G P + YS
Sbjct: 410 DEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSI 469
Query: 518 LSNKLLASNKLESAYNLF 535
L L S L +L
Sbjct: 470 LLEGLKKSKDLHELRHLV 487
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 163/347 (46%), Gaps = 1/347 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M G P++ T + ++D + + +A ++ ++ + N +L L +
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 249 VGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
+ A +LF M + +V+++NI+++G + G++ +++ + SP+ +T+S L
Sbjct: 61 LERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNVITYSVL 119
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I+GL +A R+ A+E+ ++MK +GC PD Y ++ + + M C
Sbjct: 120 IDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGC 179
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
PN+ TY L+ GL ++R+V+DAL + +M RG P+ T + ++ LC G A
Sbjct: 180 VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACA 239
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
M G L Y +L+ L + + L G D Y VI GLC
Sbjct: 240 MLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLC 299
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+L+ A ++ +G P ++YS L + L + K++ A++L+
Sbjct: 300 RSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY 346
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 8/214 (3%)
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M++ GC P+ YN++I + D + ++ M S C P+M TY L+ GL ++ K
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 388 VADALEVFEEMLDRGIVPSTGTITSF---LEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+ A+ +F+EMLDR + + SF + LC G A+ ++K C ++
Sbjct: 61 LERAMALFQEMLDR----RSHDVISFNILVTGLCRAGKIETALEFFRKMDD-RCSPNVIT 115
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y +L+ L + ++L M+ G D Y ++ GLC ++ A V+ E L
Sbjct: 116 YSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML 175
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P+ + Y+ L + L + ++ A L R +
Sbjct: 176 DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDM 209
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 184/379 (48%), Gaps = 1/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y V+V L +R D N+L+ M + + P + + ++D + + A+ +
Sbjct: 15 DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 74
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+E G++ + + + ++ CLC AS L + M + K+ +V T++ +I + K
Sbjct: 75 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 134
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++VE E++ E+V P +T+S LI G R+D+A ++F+ M K C PD Y
Sbjct: 135 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 194
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I + +E M+ ++ MS N TY LI GL ++ A E+F+EM+
Sbjct: 195 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 254
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ P+ T + L+ LC G AM++++ ++ + ++ Y +++ + GK
Sbjct: 255 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 314
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
DL+ + G D Y +I+G C G E A + +E G P+ Y+ L
Sbjct: 315 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 374
Query: 521 KLLASNKLESAYNLFRKIK 539
L E++ L ++++
Sbjct: 375 ARLRDGDREASAELIKEMR 393
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 169/352 (48%), Gaps = 36/352 (10%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
++ M +G PDL T +V++ + G A +L ++E L+ N ++ LC
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ H+ A +LF M+ K + NV+TY+ +IS G+ + R+L +++ +PD
Sbjct: 63 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
TFS LI+ + G++ +A +++D M ++ P Y+++I+ + DE + ++ M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
S +C P++ TY LI G K ++V + +EVF EM RG+V +T T
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT-------------- 228
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
Y +L++ L G C M +++ EM G P + Y +
Sbjct: 229 ---------------------YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 267
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ GLC G+LE A++V E R P+ Y+ + + + K+E ++LF
Sbjct: 268 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 319
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 185/397 (46%), Gaps = 24/397 (6%)
Query: 124 NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAI------KHP----NVAKDVKSYNVIVKAL 173
+ DL+ +++ K+ +G L E VL +N I KH N+ K++++ + +
Sbjct: 31 DTDLAFNLLNKM-EQGKL--EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 87
Query: 174 GRRKFFDFMCN---------VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+CN +LSDM + +NPD+ T S ++D+F++ G++ +A ++ +
Sbjct: 88 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 147
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
+ + + ++ C + A +F M K F +V+TYN +I G+ K +V
Sbjct: 148 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 207
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E V +E+ G +++T++ LI+GL +AG D A E+F M G P+ YN +
Sbjct: 208 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 267
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ G ++ M ++ + EP + TY +I G+ K+ KV D ++F + +G+
Sbjct: 268 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 327
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P + + C G A ++K+ ++ G + Y L+R G +
Sbjct: 328 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAE 387
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
L EM+ G+ D ++ + + G+L+ + L M
Sbjct: 388 LIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSFLDM 423
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 62/147 (42%)
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+ + + M+ +G P T + LC G A + K + + + Y ++
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L + L+L+ EM+ G + Y +I+ LCN G+ +A ++ + + + P
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
+S L + + KL A L+ ++
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEM 147
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 170/341 (49%), Gaps = 1/341 (0%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
PD+ + V+ F + Q+ A Q+L R++ G D + N+++ LC R +G A ++
Sbjct: 145 PDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTV 204
Query: 256 FNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
+ + + V+TY I+I G + E ++L+E++A G PD T++ +I G+ +
Sbjct: 205 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 264
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G ++ A E+ ++ KGC PD +YN ++ +++ G +DE K M S CEPN T
Sbjct: 265 EGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 324
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y+ LIS L + ++ +A+ V + M+++ + P T + + LC G A+ +
Sbjct: 325 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 384
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
GC + Y +L L G L+++++++ G P + Y +I+ L + G
Sbjct: 385 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 444
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
A+ ++ + KG P + Y+ L + L +E A L
Sbjct: 445 RALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLL 485
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 174/355 (49%), Gaps = 1/355 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +YN+++ +L R+ VL + + P + T +I++++ I G + +A+++L
Sbjct: 181 DIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLL 240
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ GL D + N ++ +C+ V A+ L S+ K +V++YNI++ +
Sbjct: 241 EEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQ 300
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ E E+++ E+ + G P+ +T+S LI L R GRID+AI V M EK PDT +Y
Sbjct: 301 GKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSY 360
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +IS G D + M S C P++ Y +++ L K+ ALE+F ++
Sbjct: 361 DPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRG 420
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G P+ + + + L S G A+ M G Y L+ L G
Sbjct: 421 MGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEE 480
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
+ L +M++SG+ Y V+ GLC + ++++A+ + E + KG P+ Y
Sbjct: 481 AIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTY 535
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 119/292 (40%), Gaps = 36/292 (12%)
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G+ E L+ +V +G++PD + + LI+G I+ A V + + E PD
Sbjct: 90 KAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEIL-ESHTEPDVF 148
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSY-------------------------------- 366
AYNAVIS + V + + M +
Sbjct: 149 AYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQL 208
Query: 367 ---NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
NC P + TYT LI + + +A+++ EEML RG++P T + + +C G
Sbjct: 209 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 268
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A + GC+ + +Y +LLR GK L EM G + Y +
Sbjct: 269 ERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 328
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
I+ LC G+++ A+ V++ + K P Y L + L +L+ A +
Sbjct: 329 ISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIM 380
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 199/435 (45%), Gaps = 11/435 (2%)
Query: 106 FLQKLKGKGVIED-ALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
+ ++KG + D L+NV +D GK GN+ M F +K + D
Sbjct: 236 LVDEVKGSCLEPDIVLYNV----CIDCFGKA---GNVD---MAWKFFHELKAQGLKPDDV 285
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SY ++ L + + + M E P + ++ + AG+ A ++L RL
Sbjct: 286 SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERL 345
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVV 284
+ G S N +L CL ++ V A SLF MK N TYNI+I G+V
Sbjct: 346 RERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVE 405
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E R+L E+ P+ LT + +++ L +A ++++A ++F++ ++GC PD Y ++I
Sbjct: 406 EAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLI 465
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
G DE + ++ M N YT LI + D ++F+E++ RG
Sbjct: 466 DGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCK 525
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P + ++++ + G M+++ R G + +Y +L+ L+ G+ ++
Sbjct: 526 PDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNI 585
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+H M++ G+ D Y V+ G C G++ A ++EE K P+ Y + + L
Sbjct: 586 FHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAK 645
Query: 525 SNKLESAYNLFRKIK 539
++L+ AY LF + K
Sbjct: 646 IDRLDEAYMLFEEAK 660
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 187/423 (44%), Gaps = 36/423 (8%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++H ++ ++ + N++V L + + + + ++ G NPD T ++D + GQ
Sbjct: 414 MEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQ 473
Query: 214 VYKAIQML-------------------------GRLED----------FGLKFDAESLNV 238
V +A ++ GR ED G K D LN
Sbjct: 474 VDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNT 533
Query: 239 VLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
+ C+ + V +F ++ L +V +Y+I+I G +K GQ E + + +G
Sbjct: 534 YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG 593
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
F+ D+ ++ +++G ++G++ A E+ + MKEK P Y A++ + DE
Sbjct: 594 FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAY 653
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
++ S E N+ Y+ LI G K ++ +A + EEM+ +G+ P+ T S L+ L
Sbjct: 654 MLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDAL 713
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
+ A++ ++ +++ C + Y +L+ L K W +MQ+ G +
Sbjct: 714 VKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNV 773
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
Y +I+GL +G + +A + E G P ++ L + +N+ AY +F +
Sbjct: 774 VTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEE 833
Query: 538 IKI 540
++
Sbjct: 834 TRL 836
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 157/293 (53%), Gaps = 1/293 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV+SY++++ L + N+ M ++G D + V+D F ++G+V+KA ++L
Sbjct: 562 DVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEIL 621
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+++ ++ + ++ L + + A LF K K + NV+ Y+ +I G+ K+
Sbjct: 622 EEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKV 681
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ E +L+E++ +G +P+ T++ L++ L +A I++A+ F +MKE C P+T Y
Sbjct: 682 GRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTY 741
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +I+ V +++ +++ M PN+ TYT +ISGL K + DA +FE
Sbjct: 742 SILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKA 801
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
G +P + + +E + + A ++++ R GC++++ + LL L+
Sbjct: 802 NGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALN 854
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 157/327 (48%), Gaps = 7/327 (2%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ ++ + G PDL L+ MD +AG+V K + + +G D S ++++ L
Sbjct: 515 IFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLT 574
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ S++F++MK + + YN V+ G+ K G+V + +L+E+ + P
Sbjct: 575 KAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVA 634
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T+ +++GL + R+D+A +F+ K KG + Y+++I + VG DE + M
Sbjct: 635 TYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEM 694
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
PN+ T+ L+ L+K+ ++ +AL F+ M + P+T T + + LC
Sbjct: 695 MKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKY 754
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIY 480
+ A + ++ +K G ++ Y + +SG K G + D L+ + +G D +
Sbjct: 755 NKAFVFWQDMQKQGLVPNVVTYTTM---ISGLAKVGNITDAYSLFERFKANGGIPDAASF 811
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKG 507
+I G+ N + A V EE+ +G
Sbjct: 812 NALIEGMSNANRAMEAYQVFEETRLRG 838
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 163/377 (43%), Gaps = 37/377 (9%)
Query: 169 IVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
+ AL R + D ++ M + P ++++ + A + +A+++L ++++ G
Sbjct: 150 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 209
Query: 229 LKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEME 287
+ ++ L + V A +L + +KG L +++ YN+ I + K G V
Sbjct: 210 YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 269
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
+ E+ A+G PD ++++ +I L +AGR+ +A E+F M+ + P AYN +I Y
Sbjct: 270 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 329
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
S G F+ DA ++ E + +RG +PS
Sbjct: 330 GSAGRFE-----------------------------------DAYKLLERLRERGCIPSV 354
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
+ S L L A+ +++ +K + + + Y +++ L G+ + E
Sbjct: 355 VSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDE 413
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
M+ + + ++ LC +LE A + E + ++G P + Y L + L +
Sbjct: 414 MEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQ 473
Query: 528 LESAYNLFRKIKIARQN 544
++ AY LF K+ A N
Sbjct: 474 VDEAYRLFEKMLDAGHN 490
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 110/239 (46%), Gaps = 1/239 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K V V +Y IV L + D + + +G+ ++ S ++D F + G+
Sbjct: 624 MKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGR 683
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNI 272
+ +A +L + GL + + N +L L + + A F SMK K N TY+I
Sbjct: 684 IDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSI 743
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I+G ++ + + +++ +G P+ +T++ +I GL + G I DA +F+ K G
Sbjct: 744 LINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANG 803
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
PD ++NA+I + E + ++ C N+ + L+ L KS + A
Sbjct: 804 GIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQA 862
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 109/254 (42%)
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+E+VL+E+ G+ + + L L RA R+DDA+ M+ P +AY +I
Sbjct: 128 LEKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIG 187
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+ ++ + M E + +T L+ L + +VADAL + +E+ + P
Sbjct: 188 ALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEP 247
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
++ G A + + + G K +Y ++ L G+ G +L+
Sbjct: 248 DIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELF 307
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
+M+ Y +I G + G+ E+A ++E +G PS + ++ + L
Sbjct: 308 AQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKK 367
Query: 526 NKLESAYNLFRKIK 539
K++ A +LF +K
Sbjct: 368 RKVDEALSLFEVMK 381
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 184/375 (49%), Gaps = 6/375 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V +YN +V L + + ++ M +GV PD+ T S+++D+F +A +V +A+++L
Sbjct: 394 NVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELL 453
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSK 279
+ G + + N ++ LC+ G A +F+ M K ++ + +TY +I G +
Sbjct: 454 HGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFR 513
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G+ + E +L + PD+ F+ I GL + G + A++V++ M E PD
Sbjct: 514 TGRAGQAEALLDAMP----DPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVT 569
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
+N +I+ G+F++ ++ M + N +P++ T+ LI GL K+ +V A ++ + M
Sbjct: 570 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 629
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
+ G+ P+ T + + LC G A ++ GC Y L+ L +
Sbjct: 630 NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTD 689
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
L L E++ G+ D Y ++ GL GQ E A+ V+EE + KG P + Y+ L
Sbjct: 690 DALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLI 749
Query: 520 NKLLASNKLESAYNL 534
+ L + LE A L
Sbjct: 750 DSLCKAGDLEEARRL 764
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 201/447 (44%), Gaps = 54/447 (12%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKAL---GRRKFFDFMCNVLSDMAKEGV 194
+ + SGEA +F + A+KH + D +Y ++ L GR + + + + D
Sbjct: 477 KSDRSGEAFQMFDDMALKH-GLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD------ 529
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
PD + ++ + G V +A+Q+ R+ + L D + N+++ C+ + AS+
Sbjct: 530 -PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASA 588
Query: 255 LFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
LF M K L +VMT+ +I G K GQV +L + G P+ +T++ L+ GL
Sbjct: 589 LFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLC 648
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
++GRI++A + + M GC PD+ Y +++ D+ ++ + S+ +P+
Sbjct: 649 KSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTV 708
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK- 432
TY L+ GL KS + A+ V EEM+ +G P T + ++ LC G A ++
Sbjct: 709 TYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDM 768
Query: 433 ARKVG--CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG---------YPS------ 475
+ +V C ++ Y +L+ L G+ +L EM Y S
Sbjct: 769 SSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLC 828
Query: 476 ----------------DGEI--------YEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
DG + + +I GLC GQ + A V ++ + G+ P+
Sbjct: 829 KQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPN 888
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y+ L N L ++K+E A+ + +
Sbjct: 889 VVTYNVLMNGLCKTDKMERAHAMIESM 915
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 185/428 (43%), Gaps = 45/428 (10%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F + VA + +YN I+ L + + ++ + G +PD+ T + ++DS
Sbjct: 202 IFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSL 261
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK---VLF 265
+AG + +A ++ G + + + +V++ LC+ + A L M K VL
Sbjct: 262 CKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLP 321
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF--SPDSLTFSFLIEGLGRAGRIDDAIE 323
N++TYN + G K E +++ + SPD++TFS LI+GL + G+ID+A
Sbjct: 322 NIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACS 381
Query: 324 VFD-----------------------------------TMKEKGCGPDTNAYNAVISNYI 348
VFD +M +KG PD Y+ ++ +
Sbjct: 382 VFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFC 441
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM-LDRGIVPST 407
DE ++ GM+S C PN+ T+ +I GL KS + +A ++F++M L G+VP
Sbjct: 442 KASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDK 501
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T + ++ L G A + A+ + LS G L +++
Sbjct: 502 ITYCTLIDGLFRTGRAGQAEALLDAMPDP----DTYAFNCCINGLSKLGDVSRALQVYNR 557
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
M E D + +IAG C G E A + EE + K P + + L + L + +
Sbjct: 558 MLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 617
Query: 528 LESAYNLF 535
+E+A ++
Sbjct: 618 VEAARDIL 625
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 185/419 (44%), Gaps = 53/419 (12%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN++V L + + VL +M +G +PD+ T + ++DS +AG + +A ++
Sbjct: 706 DTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLH 765
Query: 222 GRLEDFGLKF---DAESLNVVLWCLCQRLHVGAASSLFNSMKGK---VLFNVMTYNIVIS 275
G + + + + +V++ LC+ + A L M K VL N++TYN +
Sbjct: 766 GDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLD 825
Query: 276 GWSK---LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD------ 326
G K + + E+ R L++ SPD++TFS LI+GL + G+ D+A VFD
Sbjct: 826 GLCKQSMMAEACELMRSLRDGSLR-VSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGG 884
Query: 327 -----------------------------TMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
+M +KG PD Y+ ++ + DE +
Sbjct: 885 YVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEAL 944
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM-LDRGIVPSTGTITSFLEP 416
+ GM+S C PN+ T+ +I GL KS + +A ++F++M L G+ P T + ++
Sbjct: 945 ELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDG 1004
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
L G A ++ A+ + LS G L H M E D
Sbjct: 1005 LFRTGWAGQAEVLLDAMPDP----DTYAFNCCINGLSKLGDVSRAL---HRMLELELVPD 1057
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ +IAG C G E A + EE + K P + + L + L + ++E+ +++
Sbjct: 1058 KVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 175/404 (43%), Gaps = 41/404 (10%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
+ +++ EA L + V+ D +++ ++ L + D C+V DM G P+
Sbjct: 335 KQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPN 394
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ T + +++ +A ++ +A M+ + D G+ D + +V++ C+ V A L +
Sbjct: 395 VITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLH 454
Query: 258 SMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEI-VAEGFSPDSLTFSFLIEGLGRA 315
M + NV+T+N +I G K + E ++ ++ + G PD +T+ LI+GL R
Sbjct: 455 GMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRT 514
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
GR A + D M + PDT A+N I+ +GD ++ Y M P+ T+
Sbjct: 515 GRAGQAEALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTF 570
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
LI+G K+ A +FEEM+ + + P T + ++ LC G AA
Sbjct: 571 NILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAAR-------- 622
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
D+ M G P + Y ++ GLC G++E
Sbjct: 623 ---------------------------DILDLMGNLGVPPNVVTYNALVHGLCKSGRIEE 655
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
A +EE + G P + Y L L +++ + A L ++K
Sbjct: 656 ACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 699
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 192/421 (45%), Gaps = 17/421 (4%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
++ GN +A LF K N+ DV ++ ++ L + + ++L M
Sbjct: 573 LIAGACKAGNFE-QASALFEEMVAK--NLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 629
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
GV P++ T + ++ ++G++ +A Q L + G D+ + +++ LC+
Sbjct: 630 NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTD 689
Query: 251 AASSLFNSMKGKVLF----NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
A L + +K F + +TYNI++ G K GQ + VL+E+V +G PD +T++
Sbjct: 690 DALQLVSELKS---FGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYN 746
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEK---GCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
LI+ L +AG +++A + M + C P+ Y+ +I+ VG DE + + M
Sbjct: 747 TLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEM 806
Query: 364 SSYNCE--PNMDTYTRLISGLLKSRKVADALEVFEEMLDRG--IVPSTGTITSFLEPLCS 419
+C+ PN+ TY + GL K +A+A E+ + D + P T T ++ ++ LC
Sbjct: 807 MRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCK 866
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
G A ++ G ++ Y +L+ L K + M + G D
Sbjct: 867 CGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVIT 926
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y ++ C ++ A+ ++ +G P+ + ++ + + L S++ A+ +F +
Sbjct: 927 YSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMT 986
Query: 540 I 540
+
Sbjct: 987 L 987
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 139/278 (50%), Gaps = 11/278 (3%)
Query: 267 VMTYNIVISGWSKLGQVVEMERVLK-EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
V YNIV+ + G+ + + E+ +G +P +T++ +I GL ++ + +E+F
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 239
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ + E+G PD YN +I + GD +E + + MSS +C PN+ TY+ LI+GL K
Sbjct: 240 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKV 299
Query: 386 RKVADALEVFEEMLDRG--IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS-- 441
++ +A E+ +EM + ++P+ T SFL+ LC A + + R ++S
Sbjct: 300 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 359
Query: 442 LTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ L + G KCG + ++ +M GY + Y ++ GLC ++E A
Sbjct: 360 TVTFSTL---IDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHA 416
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
++E + KG P + YS L + +++++ A L
Sbjct: 417 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLH 454
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/367 (19%), Positives = 134/367 (36%), Gaps = 93/367 (25%)
Query: 246 RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
RLH A+++ + G Y+ W+ GF +F
Sbjct: 74 RLHPSVAAAILAQLDGNAELGTQFYD-----WAA--------------ALPGFKHTIFSF 114
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA-------------------------- 339
+ + L ++G AI++F + C P+
Sbjct: 115 NKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRIR 174
Query: 340 --------YNAVISNYISVGDFDECMKYYKG-MSSYNCEPNMDTYTRLISGLLKSRKVAD 390
YN V+ + G+ ++ ++G M+ P + TY +I+GL KS ++
Sbjct: 175 SSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGA 234
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
+E+FEE+++RG P T + ++ LC G A ++ C ++ Y +L+
Sbjct: 235 GMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLIN 294
Query: 451 RLSGFGKCGMLLDLWHEMQESG---------YPS----------------------DGEI 479
L G+ +L EM Y S DG +
Sbjct: 295 GLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL 354
Query: 480 --------YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
+ +I GLC GQ++ A V ++ + G+ P+ + Y+ L N L ++K+E A
Sbjct: 355 RVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERA 414
Query: 532 YNLFRKI 538
+ + +
Sbjct: 415 HAMIESM 421
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 181/382 (47%), Gaps = 1/382 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+V+ DV +YN I++ L VL + PD+ T +I++++ + V +A
Sbjct: 207 SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQA 266
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISG 276
+++L + D G K D + NV++ +C+ + A N M NV+T+NI++
Sbjct: 267 MKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRS 326
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
G+ ++ E+ L E++ +G SP +TF+ LI L R G I AI+V + M + GC P+
Sbjct: 327 MCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPN 386
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+ +YN ++ + ++Y M S C P++ TY L++ L K KV A+E+
Sbjct: 387 SLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 446
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
++ +G P T + ++ L G A+ + + + G K + Y L+ LS G
Sbjct: 447 QLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREG 506
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K + +H+++E G + Y ++ GLC Q A+ + + +G P+ Y
Sbjct: 507 KVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYM 566
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
L L + A L ++
Sbjct: 567 ILIEGLAYEGLAKEALELLNEL 588
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 174/389 (44%), Gaps = 37/389 (9%)
Query: 186 LSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
L DM G PD+ + ++ + G+ +KA +++ LED G D + NV++ C+
Sbjct: 133 LEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCK 192
Query: 246 RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
+G+A L + M V +V+TYN ++ G++ E VL + PD +T+
Sbjct: 193 TGEIGSALQLLDRMS--VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITY 250
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LIE + + A+++ D M++KGC PD YN +I+ G DE +++ M S
Sbjct: 251 TILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPS 310
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC------- 418
Y C+PN+ T+ ++ + + + DA + EM+ +G PS T + LC
Sbjct: 311 YGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGR 370
Query: 419 ------------------SYGPPHAAMMMYKKARKV----------GCKLSLTAYKLLLR 450
SY P A+ KK + GC + Y LL
Sbjct: 371 AIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLT 430
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
L GK + +++ +++ G Y VI GL +G+ ++A+ +++E KG P
Sbjct: 431 ALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKP 490
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ YS L L K++ A F ++
Sbjct: 491 DIITYSTLVGGLSREGKVDEAIAFFHDLE 519
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 159/333 (47%), Gaps = 7/333 (2%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
G+AM L ++ DV +YNV++ + + D L+ M G P++ T +
Sbjct: 264 GQAMKLLDE--MRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHN 321
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KG 261
I++ S G+ A + L + G + N+++ LC++ +G A + M +
Sbjct: 322 IILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQH 381
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
N ++YN ++ K ++ L +V+ G PD +T++ L+ L + G++D A
Sbjct: 382 GCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVA 441
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+E+ + + KGC P YN VI VG D+ +K M +P++ TY+ L+ G
Sbjct: 442 VEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGG 501
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM--MMYKKARKVGCK 439
L + KV +A+ F ++ + G+ P+ T S + LC A+ + Y AR GCK
Sbjct: 502 LSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVAR--GCK 559
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
+ T+Y +L+ L+ G L+L +E+ G
Sbjct: 560 PTETSYMILIEGLAYEGLAKEALELLNELCSRG 592
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 166/347 (47%), Gaps = 1/347 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y ++++A + +L +M +G PD+ T +++++ + G++ +AI+ L
Sbjct: 246 DVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFL 305
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLH-VGAASSLFNSMKGKVLFNVMTYNIVISGWSKL 280
+ +G + + + N++L +C + A L ++ +V+T+NI+I+ +
Sbjct: 306 NHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRK 365
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + VL+++ G +P+SL+++ L+ L + +++ AIE D M +GC PD Y
Sbjct: 366 GLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTY 425
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +++ G D ++ + S C P + TY +I GL K K DA+++ +EM
Sbjct: 426 NTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKG 485
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G+ P T ++ + L G A+ + ++G K + Y ++ L +
Sbjct: 486 KGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVR 545
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
+D M G Y +I GL G + A+ ++ E +G
Sbjct: 546 AIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRG 592
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 162/324 (50%), Gaps = 12/324 (3%)
Query: 106 FLQKLKGKGVIEDAL-WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
L +++ KG D + +NV ++ + G L + + F N + +V
Sbjct: 269 LLDEMRDKGCKPDVVTYNV-------LINGICKEGRL--DEAIRFLNHMPSY-GCQPNVI 318
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++N+I++++ + L++M ++G +P + T +I+++ R G + +AI +L ++
Sbjct: 319 THNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKM 378
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
G ++ S N +L LC+ + A + M + + +++TYN +++ K G+V
Sbjct: 379 PQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 438
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+L ++ ++G SP +T++ +I+GL + G+ DDAI++ D MK KG PD Y+ +
Sbjct: 439 DVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTL 498
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ G DE + ++ + +PN TY ++ GL K+R+ A++ M+ RG
Sbjct: 499 VGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGC 558
Query: 404 VPSTGTITSFLEPLCSYGPPHAAM 427
P+ + +E L G A+
Sbjct: 559 KPTETSYMILIEGLAYEGLAKEAL 582
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 138/565 (24%), Positives = 240/565 (42%), Gaps = 38/565 (6%)
Query: 1 MAFLSRFYRTRYPLSSLSSSFSLFSFSTSVRSNLSYNELLSN--QKKNMSSLDEHHVLKE 58
+ LS F R P ++L++ L S S+N LL + + S D
Sbjct: 87 LVVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADA------ 140
Query: 59 LSDLFQISSHNSF-----PNV--YKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLK 111
F SH +F PN+ Y + R D RAV L R RGV ++
Sbjct: 141 ---FFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVS--LFSSLRRRGVAPDRVT 195
Query: 112 GKGVIEDALWNVNVDLSLDVVGKVVNRGN----------LSG-------EAMVLFFNWAI 154
++ + +D +LD++ ++ N G LSG E + + +
Sbjct: 196 YSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLV 255
Query: 155 KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV 214
+ P + ++ +Y V++ L + F V S M D T I++ R+G V
Sbjct: 256 RDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDV 315
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVI 274
A ++ + GL D N ++ C+ G A ++S + + TYNI+
Sbjct: 316 DSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMT 375
Query: 275 SGWSKLGQVVEMERVLKEIVAEG-FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
G G V E +LK++ + SPD +TF LI GL G + A E+ + + G
Sbjct: 376 KGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGE 435
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
D +Y+++I+ + G + + YK M C+PN Y LI+G + K+ DA++
Sbjct: 436 ELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIK 495
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
++ EM G P+ T + ++ LC A + K+ + G K + Y L+R L
Sbjct: 496 IYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLC 555
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
K + L +W E+ ++G D ++ +I GLC+ G+++ A + E K P+ +
Sbjct: 556 RDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLV 615
Query: 514 VYSKLSNKLLASNKLESAYNLFRKI 538
Y+ L + ++ A +L+ I
Sbjct: 616 TYNTLMDGFYEIGSIDKAASLWTAI 640
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 137/300 (45%), Gaps = 1/300 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ + D ++ ++ L + + +L D G D+ + S +++ F + G+ + A
Sbjct: 399 SCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDA 458
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
++ + G K ++ N ++ C+ + A ++ M ++TYN +I G
Sbjct: 459 NEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDG 518
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K + E + KE++ GF PD T++ LI GL R ++D A+ ++D + + G D
Sbjct: 519 LCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVD 578
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+N +I S G DE Y M NC PN+ TY L+ G + + A ++
Sbjct: 579 VMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWT 638
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+LD G+ P T + ++ LCS +++ + G ++ + +L+R + +G
Sbjct: 639 AILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYG 698
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 121/262 (46%), Gaps = 1/262 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV SY+ ++ + V +M K+G P+ + +++ F R ++ AI++
Sbjct: 438 DVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIY 497
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
+ G + N ++ LC+ ASSL M + ++ TY +I G +
Sbjct: 498 IEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRD 557
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+V R+ EI+ G D + + LI GL AG++D+A ++ MKEK C P+ Y
Sbjct: 558 KKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTY 617
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N ++ + +G D+ + + +P++ TY I GL + + + + E+L
Sbjct: 618 NTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLA 677
Query: 401 RGIVPSTGTITSFLEPLCSYGP 422
GI+P+ T + + + YGP
Sbjct: 678 TGIMPTVITWSILVRAVIKYGP 699
>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 187/395 (47%), Gaps = 7/395 (1%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKAL--GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
LF + I P + ++ SY+V++ G + + +LS+M EGV P+ T +
Sbjct: 198 LFDDMKISGP--SPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYL 255
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF 265
RA QV A L L G ++ N V+ C V A +F+ MK K F
Sbjct: 256 YGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMK-KCGF 314
Query: 266 --NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+V +Y+I++ G K G V+ +L E+ G +P+ +++S L+ GL RAGR++ A E
Sbjct: 315 VPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFE 374
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+F +K++G D Y+ V+ D + C + M +N P+ Y+ LI
Sbjct: 375 LFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYC 434
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
+ R++ +ALEVFE M+ GI P+ T T + + G A + K R+ G +L
Sbjct: 435 RHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLC 494
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
Y++++ L K + ++ +M + GY D +Y +I G L+ A + +
Sbjct: 495 TYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKM 554
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ +G P+ Y+ L N L +KL LF+ +
Sbjct: 555 VDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHM 589
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 168/367 (45%), Gaps = 1/367 (0%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+K DV SY+++V L ++ +L +MA+ G+ P+L + S ++ RAG
Sbjct: 308 GMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAG 367
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYN 271
+V A ++ RL+D G K D ++VL CQ L + L+N M + + Y+
Sbjct: 368 RVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYS 427
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I + + Q+ E V + ++ +G P+ +T + L+ G G I +A D +++
Sbjct: 428 SLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQF 487
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G P+ Y +I+ V ++ + M P+ Y+ +I G +K+ + +A
Sbjct: 488 GVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEA 547
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
++ +M+D G P+ T TS + LC M ++K G Y L+
Sbjct: 548 FRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIAC 607
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L+++ EM+ G +D +Y +I G + ++ A L MEE + KG P+
Sbjct: 608 YCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPT 667
Query: 512 RLVYSKL 518
+ Y+ L
Sbjct: 668 VVTYTDL 674
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 137/336 (40%), Gaps = 36/336 (10%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H N D +Y+ ++ A R + V M +G+ P++ T +I++ F G +
Sbjct: 416 HHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIG 475
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVIS 275
+A L ++ FG V+ N+ TY ++I+
Sbjct: 476 EAFLFLDKVRQFG----------------------------------VVPNLCTYRVIIN 501
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G K+ + ++ + +++ G+ PD++ +S +I+G +A + +A ++ M ++G P
Sbjct: 502 GLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKP 561
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+ Y ++I+ E M +K M P+ YT LI+ K + ALE+F
Sbjct: 562 NIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIF 621
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
EM G+ + T + A + ++ G ++ Y L+
Sbjct: 622 REMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKI 681
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
G + +++ M ++G D ++ I GL N G
Sbjct: 682 GDEKKAMVMYNSMLQAGIAPDAKL--SCILGLGNDG 715
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 115/267 (43%), Gaps = 36/267 (13%)
Query: 141 LSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
L GEA LF + ++ V ++ +Y VI+ L + + + + +DM K G PD
Sbjct: 473 LIGEAF-LFLD-KVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVL 530
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
SI++D F++A + +A ++ ++ D G K
Sbjct: 531 YSIIIDGFVKALDLQEAFRLYYKMVDEGTK------------------------------ 560
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
N+ TY +I+G ++ E+ + K ++ EG +PD + ++ LI + +
Sbjct: 561 ----PNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKA 616
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A+E+F M+ +G D+ Y +I + V D + + M + P + TYT LI
Sbjct: 617 ALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLII 676
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPST 407
G K A+ ++ ML GI P
Sbjct: 677 GYFKIGDEKKAMVMYNSMLQAGIAPDA 703
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 96/236 (40%), Gaps = 37/236 (15%)
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF--DECMKYYKGM 363
+FL++GL +I +FD MK G P+ +Y+ ++S Y +E + M
Sbjct: 180 NFLLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEM 239
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
PN TY + GL ++++V A + + RG ++ + + C G
Sbjct: 240 EVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQV 299
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
H A+ ++ G KCG + D+ Y +
Sbjct: 300 HKAVEVF----------------------DGMKKCGFVPDVHS-------------YSIL 324
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ GLC G + ++ E R G P+ + YS L + L + ++E A+ LF+++K
Sbjct: 325 VDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLK 380
>gi|413938979|gb|AFW73530.1| ATP binding protein [Zea mays]
Length = 551
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 214/485 (44%), Gaps = 25/485 (5%)
Query: 83 VKRIDSSRAVDEFLLPEERLR--------GVFLQKLKGKGVIEDALWNVNVDLSLDVVGK 134
V+R+ S A+ L +ER V + E AL + +L+ +V
Sbjct: 54 VRRLSSEHAILPTHLQDERFATLSDRIYDAVIKTGTESNEGTEAALDALGAELTTPLVAD 113
Query: 135 VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKF----FDFMCNVLSDMA 190
V++R + FF WA + + + +YN I+ L ++ F +CNVL M
Sbjct: 114 VLHRLRYEEKLAFRFFAWASQQDGYSHEPTTYNDIIDILSGTRYKSRQFGVLCNVLDHMK 173
Query: 191 KEGVNP-DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHV 249
+ G +E L ++ ++ + R + ++LNV+L C+ V
Sbjct: 174 RHGSRSVPVEGLLEILRAYTEKHLTHMRKLAKKRRVRMRTPPETDALNVLLDAFCKCGMV 233
Query: 250 GAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A ++F +K K+L N TY+ + GW + + +VL+E++ +P+S T+ I
Sbjct: 234 KEAEAVFGRVKRKLLGNAETYSTLFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYVAAI 293
Query: 310 EGLGRAGRIDDAIEVFDTMKEKG---CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
E AG + +A E+F+ M+ +G P Y+ +I +EC + M +
Sbjct: 294 ESFCSAGLVSEARELFEFMRTEGLTVSSPTAKTYSIMIVALAKADRMEECFELLSDMRTC 353
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
C P++ TY LI G+ ++ A V +EM G P T FL LCS A
Sbjct: 354 GCMPDVTTYKDLIEGMCLVGRLDAAYRVLDEMGRAGFPPDIVTYNCFLNVLCSLRNADDA 413
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ + ++ + C+ S+ Y +L+ G+ LD+W EM + G + YE +I G
Sbjct: 414 LELCERMIEAHCEPSVHTYNMLMMMFFEMGEAHRALDIWLEMDKRGCQRAIDTYEIMIYG 473
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDY 546
L + G+ E A +++E + + +L Y K +L +L + NL I R +++
Sbjct: 474 LFDCGETEYATALLDEVINRDM---KLSYKKFDAIML---RLSAVGNLG---AIHRLSEH 524
Query: 547 ARRLW 551
R+ +
Sbjct: 525 MRKFY 529
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 183/378 (48%), Gaps = 15/378 (3%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F+ A+K V DV +YN ++ + D +L M E + PD+ T + +++
Sbjct: 67 IFDGAVKRGFVP-DVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGL 125
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH-VGAASSLFNS-MKGKVLFN 266
+ G+V +A +ML + D G + + + ++ LC+ L V A LF S +K
Sbjct: 126 CKNGRVDEA-RML--IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPE 182
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V TYNI+I G K +V E + +V G PD++T++ I+GL +AGR++DA+ +
Sbjct: 183 VPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLK 242
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M EKGC PD ++NAVI+ DE GM + C PN ++ LI G ++
Sbjct: 243 DMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAG 302
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY---GPPHAAMMMYKKARKVGCKLSLT 443
K A+ F+EML RG+ P+ T ++ LC G A+ ++ + G +
Sbjct: 303 KWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVV 362
Query: 444 AYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
Y L + G GK G L D L M+ G + Y +I+GLC + +++ A+ +
Sbjct: 363 TYSAL---IDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELF 419
Query: 501 EESLRKGFCPSRLVYSKL 518
+ KG P + Y +
Sbjct: 420 VAMVEKGCVPDTITYGTI 437
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 141/267 (52%), Gaps = 4/267 (1%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N +TYN ++SG G++ + + + + ++ G+SPD +T++ L+ G + G +D+A+++F
Sbjct: 9 NRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIF 68
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D ++G PD YNA+I+ + DE + + M S N P++ TY L++GL K+
Sbjct: 69 DGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKN 128
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLC-SYGPPHAAMMMYKKARKVGCKLSLTA 444
+V +A + ++D+G P+ T ++ + LC A+ ++ K G + +
Sbjct: 129 GRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPT 185
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y +L+ L + +L+ + + G D Y I GLC G++E+A+L++++
Sbjct: 186 YNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMD 245
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESA 531
KG P + ++ + N L +++ A
Sbjct: 246 EKGCVPDVVSHNAVINGLCKEKRVDEA 272
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 130/276 (47%), Gaps = 41/276 (14%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ LF ++ +V +YN+++ L + + + S + K G+ PD T ++
Sbjct: 166 EALKLF--GSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTV 223
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
+D +AG+V A+ ML +++ G D S N V+ LC+ V A L + M+ K
Sbjct: 224 FIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG 283
Query: 263 -----VLFN------------------------------VMTYNIVISGWSKL---GQVV 284
+ FN V+TYNI++ G K G++
Sbjct: 284 CSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIK 343
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E + ++ +G PD +T+S LI+GLG+AG++DDA + M+ KGC P+ YN++I
Sbjct: 344 EAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLI 403
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
S + DE ++ + M C P+ TY +IS
Sbjct: 404 SGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIIS 439
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 147/308 (47%), Gaps = 9/308 (2%)
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
+ N +L LC + A +L+ M K +V+TYN ++ G+ K+G++ E ++
Sbjct: 12 TYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGA 71
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
V GF PD +T++ LI G +A ++D+A + M + PD YN++++ G
Sbjct: 72 VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRV 131
Query: 354 DEC--MKYYKGMSSYNCEPNMDTYTRLISGLLKS-RKVADALEVFEEMLDRGIVPSTGTI 410
DE + KG S PN+ TY+ LISGL + R V++AL++F +L +G P T
Sbjct: 132 DEARMLIVDKGFS-----PNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTY 186
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
++ L + A ++ K G + Y + + L G+ L + +M E
Sbjct: 187 NILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDE 246
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G D + VI GLC +++ A +++ KG P+ + ++ L + K +
Sbjct: 247 KGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKK 306
Query: 531 AYNLFRKI 538
A F+++
Sbjct: 307 AMTTFKEM 314
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 4/209 (1%)
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M++ G P+ YNA++S + G + Y+ M P++ TY L+ G K +
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +AL++F+ + RG VP T + + C A + ++ + Y
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC-NIGQLENAVLVMEESLRK 506
L ++G K G + + + + G+ + Y +I+GLC + + A+ + L++
Sbjct: 121 L---VNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLF 535
G+ P Y+ L + LL +++ A+ LF
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELF 206
>gi|356540343|ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 543
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 194/412 (47%), Gaps = 1/412 (0%)
Query: 119 ALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKF 178
AL ++ S +V +V+NR + + FF WA + N++V LG+ K
Sbjct: 114 ALDGLSFQPSSGLVSQVLNRFSNDWVPALGFFKWAKSQTGYRHSPELCNLMVDILGKCKS 173
Query: 179 FDFMCNVLSDMAK-EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLN 237
FD M +++ +MAK E LET++ V+ +A + AI+ R++ FG+ D +LN
Sbjct: 174 FDPMSDLVEEMAKLEQGYVTLETMAKVIRRLAKARKHEDAIEAFRRMDKFGVNKDTAALN 233
Query: 238 VVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
V++ L + V A + KG + + ++N+++ GW + + + ++++ G
Sbjct: 234 VLIDALVKGDSVEHAHKVVLEFKGLIPLSSHSFNVLMHGWCRARKFDNARKAMEDMKELG 293
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
F PD +++ IE +V + M+E GC P+ Y V+ + G + +
Sbjct: 294 FEPDVFSYTSFIEAYCHERDFRKVDQVLEEMRENGCPPNAVTYTTVMLHLGKAGQLSKAL 353
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+ Y+ M C + Y+ +I L K+ ++ DA +VFE+M +G+V T + +
Sbjct: 354 EVYEKMKCDGCVADTPVYSCMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNTMISTA 413
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
C++ A+ + K+ CK ++ Y LL+ + +L L M ++ D
Sbjct: 414 CAHSREETALRLLKEMEDGSCKPNVGTYHPLLKMCCKKKRMKVLKFLLDHMFKNDISPDL 473
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
Y ++ LC G++ +A +EE + KGF P L+ +L + + LE
Sbjct: 474 ATYSLLVNALCKTGKVADAYSFLEEMVLKGFTPKPSTLKGLAGELESLSMLE 525
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 115/239 (48%), Gaps = 7/239 (2%)
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI---SVGDFDECMKYY 360
T + +I L +A + +DAIE F M + G DT A N +I + SV + + +
Sbjct: 196 TMAKVIRRLAKARKHEDAIEAFRRMDKFGVNKDTAALNVLIDALVKGDSVEHAHKVVLEF 255
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
KG+ + ++ L+ G ++RK +A + E+M + G P + TSF+E C
Sbjct: 256 KGLIPLSSH----SFNVLMHGWCRARKFDNARKAMEDMKELGFEPDVFSYTSFIEAYCHE 311
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
+ ++ R+ GC + Y ++ L G+ L+++ +M+ G +D +Y
Sbjct: 312 RDFRKVDQVLEEMRENGCPPNAVTYTTVMLHLGKAGQLSKALEVYEKMKCDGCVADTPVY 371
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I L G+L++A V E+ ++G + Y+ + + A ++ E+A L ++++
Sbjct: 372 SCMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNTMISTACAHSREETALRLLKEME 430
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 107/247 (43%), Gaps = 36/247 (14%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV SY ++A + F + VL +M + G P+ T + VM +AGQ+ KA+++
Sbjct: 297 DVFSYTSFIEAYCHERDFRKVDQVLEEMRENGCPPNAVTYTTVMLHLGKAGQLSKALEVY 356
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW--- 277
+++ G D + +++ L + + A +F M K V+ +V+TYN +IS
Sbjct: 357 EKMKCDGCVADTPVYSCMIFILGKAGRLKDACDVFEDMPKQGVVRDVVTYNTMISTACAH 416
Query: 278 ----SKLGQVVEME------------------------RVLKEIVAEGF----SPDSLTF 305
+ L + EME +VLK ++ F SPD T+
Sbjct: 417 SREETALRLLKEMEDGSCKPNVGTYHPLLKMCCKKKRMKVLKFLLDHMFKNDISPDLATY 476
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
S L+ L + G++ DA + M KG P + + S+ +E + + M
Sbjct: 477 SLLVNALCKTGKVADAYSFLEEMVLKGFTPKPSTLKGLAGELESLSMLEEKERVEEWMDR 536
Query: 366 YNCEPNM 372
++ + N+
Sbjct: 537 FSQKQNI 543
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 181/379 (47%), Gaps = 1/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y +V L +R D ++L M K + D+ + ++D+ V A+ +
Sbjct: 219 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLF 278
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+++ G++ + + N ++ CLC AS L + M + K+ NV+T++ +I + K
Sbjct: 279 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 338
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++VE E++ E++ PD T+S LI G R+D+A +F+ M K C P+ Y
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I + +E M+ ++ MS N TY LI GL ++ A ++F++M+
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ P T + L+ LC YG A+++++ +K + + Y +++ + GK
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
DL+ + G + IY +I+G C G E A + E G P+ Y+ L
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578
Query: 521 KLLASNKLESAYNLFRKIK 539
L ++ L ++++
Sbjct: 579 ARLRDGDKAASAELIKEMR 597
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 205/465 (44%), Gaps = 71/465 (15%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+V+ +++ ++ D+ SYN+++ RR VL M K G PD+ TLS ++
Sbjct: 98 LVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLL 157
Query: 206 DSFIRAGQV-----------------------------------YKAIQMLGRLEDFGLK 230
+ + ++ +A+ ++ R+ G +
Sbjct: 158 NGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQ 217
Query: 231 FDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKV-------------------------L 264
D + V+ LC+R + A SL M KGK+ L
Sbjct: 218 PDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNL 277
Query: 265 F----------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
F NV+TYN +I G+ + R+L +++ +P+ +TFS LI+ +
Sbjct: 278 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 337
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G++ +A +++D M ++ PD Y+++I+ + DE ++ M S +C PN+ T
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y LI G K+++V + +E+F EM RG+V +T T + ++ L G A ++KK
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G + Y +LL L +GK L ++ +Q+S D Y +I G+C G++E
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + KG P+ ++Y+ + + E A LFR++K
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 194/396 (48%), Gaps = 11/396 (2%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L+K++ KG IE +V + ++ + N N++ +A+ LF + + + +V +
Sbjct: 242 LLKKME-KGKIE-----ADVVIYTTIIDALCNYKNVN-DALNLF--TEMDNKGIRPNVVT 292
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN +++ L + +LSDM + +NP++ T S ++D+F++ G++ +A ++ +
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVV 284
+ D + + ++ C + A +F M K F NV+TYN +I G+ K +V
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E + +E+ G +++T++ LI+GL +AG D A ++F M G PD Y+ ++
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
G ++ + ++ + EP++ TY +I G+ K+ KV D ++F + +G+
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P+ T+ + C G A ++++ ++ G + Y L+R G +L
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
EM+ G+ D VI L + G+LE + L M
Sbjct: 593 IKEMRSCGFVGDASTISMVINMLHD-GRLEKSYLEM 627
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 100/227 (44%)
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
E+V P + F+ L+ + + + D I + + M+ D +YN +I+ +
Sbjct: 70 EMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRS 129
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
+ M EP++ T + L++G +++++A+ + ++M P+T T
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 189
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
+ + L + A+ + + GC+ L Y ++ L G + L L +M++
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 249
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+D IY +I LCN + +A+ + E KG P+ + Y+ L
Sbjct: 250 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 33/170 (19%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
D +L +L K+ DA+++F EM+ +PS L + + + ++
Sbjct: 46 DYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGER 105
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+ + L +Y +L+ + + L + +M + GY D ++ G C+ +
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 165
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+ AV ++++ + P+ + ++ L + L NK A L ++ +AR
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRM-VAR 214
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 177/399 (44%), Gaps = 1/399 (0%)
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
VL+ + ++ + ++ + N+++ + F +V + + K G PD T + +
Sbjct: 104 VLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSK 163
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLF 265
GQ+ +A ++ G FD S ++ LC+ AA L + G V
Sbjct: 164 GLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQP 223
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
NV+ YN +I K+ V E + E+V++G SPD +T+S LI G G++ DAI++F
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLF 283
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ M + PD +N +++ + G E + M +PN TY L+ G
Sbjct: 284 NKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLV 343
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
++V A +F M G+ P + + + C AM ++K+ + + Y
Sbjct: 344 KEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTY 403
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ LS G+ L L +M + G P + Y ++ LC Q++ A+ ++ +
Sbjct: 404 SSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKD 463
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
KGF P YS L L S KLE A +F + + N
Sbjct: 464 KGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYN 502
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 194/404 (48%), Gaps = 41/404 (10%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V +V YN I+ ++ + K + ++ S+M +G++PD+ T S ++ F
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFC--------- 271
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGW 277
+LG+L+D A LFN M + +V T+NI+++ +
Sbjct: 272 -ILGKLKD-------------------------AIDLFNKMILENIKPDVYTFNILVNAF 305
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G++ E + V ++ +G P+ +T++ L++G ++ A +F+TM + G PD
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+Y+ +I+ + + FDE M +K M N P++ TY+ LI GL KS +++ AL++ ++
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M DRG+ P+ T S L+ LC A+ + K + G + ++ Y +L++ L GK
Sbjct: 426 MHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGK 485
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
++ ++ GY D Y +I G C G A+ ++ + G P Y
Sbjct: 486 LEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545
Query: 518 LSNKLLASNKLESAYNLFRKIKIARQ---NDYARRLWR-SKGWH 557
+ L ++ + A L R++ IAR N Y L R ++ WH
Sbjct: 546 IILSLFKKDENDMAEKLLREM-IARGLPLNFYDLYLTRLAQTWH 588
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 142/333 (42%), Gaps = 1/333 (0%)
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLF 265
+F V A+ + RL A N +L L + H L M+ + +
Sbjct: 59 TFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKP 118
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N++ NI+I+ + +LG + V +I+ G+ PD++TF+ L +GL G+I A
Sbjct: 119 NLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFH 178
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D + G D +Y +I VG+ + + + +PN+ Y +I + K
Sbjct: 179 DKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKV 238
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+ V +A ++F EM+ +GI P T ++ + C G A+ ++ K K + +
Sbjct: 239 KLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTF 298
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+L+ GK ++ M + G + Y ++ G C + ++ A + +
Sbjct: 299 NILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ 358
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P YS + N K + A NLF+++
Sbjct: 359 GGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEM 391
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 90/235 (38%), Gaps = 35/235 (14%)
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK----------- 387
+Y++ + + S D D+ + + + N P + +++ L+KS+
Sbjct: 52 SYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM 111
Query: 388 ------------------------VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ A VF ++L G VP T T T+ + LC G
Sbjct: 112 EFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQI 171
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A + + K +G +Y L+ L G+ LDL + + + +Y +
Sbjct: 172 QQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTI 231
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
I +C + + A + E + KG P + YS L + KL+ A +LF K+
Sbjct: 232 IDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM 286
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 69/168 (41%)
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
N +Y+ + + V DA+ +F +L R P L L H + +
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
+K G K +L +L+ G ++ ++ + GY D + + GLC
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GQ++ A L ++ + GF ++ Y L + L + +A +L +++
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV 216
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 179/391 (45%), Gaps = 36/391 (9%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
++ M + G P+ T V++ ++GQ A+++L ++E+ +K DA ++++ LC
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS------------------------- 278
+ + A +LFN M+ K + N++TYNI+I G+
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 279 ----------KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
K G++ E E + KE++ G +PD++T++ LI+G + +D A ++ D M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
KGC P+ +N +I+ Y D+ ++ ++ MS + TY LI G + K+
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A E+F+EM+ R + P+ T L+ LC G A+ +++K K +L + Y ++
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ + K DL+ + G + Y +I GLC G L A L+ + G
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 574
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P Y+ L L + L ++K
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLIEELK 605
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 193/398 (48%), Gaps = 7/398 (1%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+VL ++ +A ++ + ++++ R + + + + K G P+ T S ++
Sbjct: 106 LVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLI 165
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVL 264
+ G+V +A++++ R+ + G K D ++N ++ LC A L + M +
Sbjct: 166 NGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQ 225
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
N +TY V++ K GQ +L+++ D++ +S +I+GL + G +D+A +
Sbjct: 226 PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNL 285
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F+ M+ KG + YN +I + + G +D+ K + M PN+ T++ LI +K
Sbjct: 286 FNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 345
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
K+ +A E+ +EM+ RGI P T T TS ++ C A M GC ++
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405
Query: 445 YKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ +L ++G+ K + L+L+ +M G +D Y +I G C +G+L A + +
Sbjct: 406 FNIL---INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
E + + P+ + Y L + L + + E A +F KI+
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 171/343 (49%), Gaps = 2/343 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ ++ +YN+++ +D +L DM K +NP++ T S+++DSF++ G++ +A
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ + G+ D + ++ C+ H+ A+ + + M K N+ T+NI+I+G+
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K ++ + + +++ G D++T++ LI+G G+++ A E+F M + P+
Sbjct: 414 CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 473
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y ++ G+ ++ ++ ++ + E ++ Y +I G+ + KV DA ++F
Sbjct: 474 VTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 533
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ +G+ P T + LC GP A ++++K + G Y +L+R G G
Sbjct: 534 LPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGD 593
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+ L E++ G+ D + VI L + G+L+ + L M
Sbjct: 594 ATKSVKLIEELKRCGFSVDASTIKMVIDMLSD-GRLKKSFLDM 635
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 98/241 (40%), Gaps = 35/241 (14%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P + FS L + + + D + + M+ KG + + +I+ +
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ EPN T++ LI+GL +V++ALE+ + M++ G P TI + + LC
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
G AM++ K + GC+ + Y +L + G+ + ++L +M+E D
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y +I GLC G L+NA +NLF +++
Sbjct: 266 YSIIIDGLCKHGSLDNA-----------------------------------FNLFNEME 290
Query: 540 I 540
+
Sbjct: 291 M 291
>gi|224149779|ref|XP_002336862.1| predicted protein [Populus trichocarpa]
gi|222837029|gb|EEE75408.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
R + ++ FFNWA K +++N +V G+ + FD +V+ M V
Sbjct: 122 RHGIPVPQVLAFFNWASYQDGFDKSPEAFNEMVDFAGKVRMFDLAWHVIDLMKARDVEIT 181
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ET SI+M ++RAG +AI R+ED+ K D + ++++ LC++ A F+
Sbjct: 182 VETFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEFFD 241
Query: 258 SMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
S+K K +V+ Y ++ GW + G + E ERV E+ G P+ T+S +I+ L R G+
Sbjct: 242 SLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQ 301
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
I A +VF M + GC P++ YN+++ ++ G ++ ++ Y M CEP+ TY
Sbjct: 302 ITRAHDVFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNF 361
Query: 378 LISGLLK 384
LI K
Sbjct: 362 LIETHCK 368
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 2/192 (1%)
Query: 259 MKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
MK + V V T++I++ + + G E + PD + FS LI L R R
Sbjct: 173 MKARDVEITVETFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKRR 232
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
+A E FD++K+K PD Y ++ + G+ E + + M +PN+ TY+
Sbjct: 233 ASEAQEFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSI 291
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
+I L + ++ A +VF EMLD G P++ T S + G + +Y + +++G
Sbjct: 292 VIDSLCRCGQITRAHDVFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLG 351
Query: 438 CKLSLTAYKLLL 449
C+ Y L+
Sbjct: 352 CEPDTVTYNFLI 363
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 1/185 (0%)
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
TFS L+ RAG +AI F+ M++ C PD A++ +IS E +++ +
Sbjct: 184 TFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEFFDSL 243
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
EP++ YT L+ G ++ +++A VF EM GI P+ T + ++ LC G
Sbjct: 244 KD-KFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQI 302
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A ++ + GC+ + Y L+R G+ +L ++++M+ G D Y ++
Sbjct: 303 TRAHDVFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFL 362
Query: 484 IAGLC 488
I C
Sbjct: 363 IETHC 367
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 99/223 (44%), Gaps = 1/223 (0%)
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+GF F+ +++ G+ D A V D MK + ++ ++ Y+ G E
Sbjct: 141 DGFDKSPEAFNEMVDFAGKVRMFDLAWHVIDLMKARDVEITVETFSILMRRYVRAGLAAE 200
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+ + M YNC+P+ ++ LIS L + R+ ++A E F+ + D+ P T+ +
Sbjct: 201 AIHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEFFDSLKDK-FEPDVIVYTNLVR 259
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
C G A ++ + + G K ++ Y +++ L G+ D++ EM ++G
Sbjct: 260 GWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDVFAEMLDAGCQP 319
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+ Y ++ G+ E + V + R G P + Y+ L
Sbjct: 320 NSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFL 362
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 204/441 (46%), Gaps = 13/441 (2%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+EDAL + LS ++V V+ R E FF W + + V ++N+++ L +
Sbjct: 51 MEDALEKLAPFLSSEIVNDVM-REQRRPELGFRFFIWTTRRRSFRSWV-THNLVIDMLAK 108
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
FD +L ++ + T S+++ ++ ++G KA++ G+++DFG K D +
Sbjct: 109 DDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFT 168
Query: 236 LNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
N +L + Q+ A +++N M K N T+ I+++G K G+ + ++ E+
Sbjct: 169 YNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMT 228
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
+G P+++ ++ ++ GL +A R DD + +TMK GC PD+ NA++ + +G D
Sbjct: 229 QKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQID 288
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E + + Y+ LI GL ++++ + E +M GI P T +
Sbjct: 289 EAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILI 348
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ----- 469
C G A+ M + G Y L++ GF G LLD +Q
Sbjct: 349 RGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIK---GFCDVG-LLDKARSLQLEISK 404
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
+P+ Y +I G+C G L+ A + + G PS + ++ L + L + +LE
Sbjct: 405 NDCFPTSC-TYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELE 463
Query: 530 SAYNLFRKIKIARQNDYARRL 550
A +LF K++I + RL
Sbjct: 464 EARHLFYKMEIGKNPSLFLRL 484
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 172/412 (41%), Gaps = 64/412 (15%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN I+ + +++ F V + M K NP+ T I+++ + G+ A++M
Sbjct: 165 DVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMF 224
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
+ G+ + ++L LCQ L N+MK + +T N ++ G+ KL
Sbjct: 225 DEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKL 284
Query: 281 GQVVEMERVLKEIVAEGF-----------------------------------SPDSLTF 305
GQ+ E +L+ EG+ PD + +
Sbjct: 285 GQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLY 344
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LI G G +D A+ + + M ++G PDT YNA+I + VG D+ +S
Sbjct: 345 TILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISK 404
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
+C P TYT LI G+ ++ + +A ++F +M + G PS T + ++ LC G
Sbjct: 405 NDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGE--- 461
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
++AR + K+ + L RLS Q + D
Sbjct: 462 ----LEEARHLFYKMEIGKNPSLFLRLS---------------QGADRVMD------TAN 496
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
G + + E+A V+++ ++ G PS VY L KL A++L+ K
Sbjct: 497 GFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLK 548
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 105/487 (21%), Positives = 185/487 (37%), Gaps = 95/487 (19%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ + Y +I+ L + K D + +L+ M G PD T + ++D F + GQ+ +A
Sbjct: 232 IPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAF 291
Query: 219 QMLGRLED----FGLK---------FDAESLNVVL-WC---------------------L 243
+L E G+K F A+ + V WC
Sbjct: 292 ALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGF 351
Query: 244 CQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C+ V A ++ N M + L + YN +I G+ +G + + + EI P S
Sbjct: 352 CEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTS 411
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
T++ LI G+ R G +D+A ++F+ M+ GC P +NA+I G+ +E +
Sbjct: 412 CTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYK 471
Query: 363 MS-----------SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
M S + MDT +G + + DA V ++M+ G PS+
Sbjct: 472 MEIGKNPSLFLRLSQGADRVMDT----ANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYK 527
Query: 412 SFLEPLCSYGPPHAAMMMYKK-------------------------ARKVGCKLSL---- 442
+ C G A ++ K + V C L +
Sbjct: 528 CLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKL 587
Query: 443 -----TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
Y + L L + L ++ ++E + +I GLC G LE AV
Sbjct: 588 NNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAV 647
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA----------RQNDYA 547
+ +L KGF + ++L L+ +K++ A +L ++ A R Y
Sbjct: 648 DIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYDLDEYLHHRIKSYL 707
Query: 548 RRLWRSK 554
+W+++
Sbjct: 708 LSVWKAQ 714
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 181/379 (47%), Gaps = 1/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y +V L +R D ++L M K + D+ + ++D+ V A+ +
Sbjct: 203 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLF 262
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+++ G++ + + N ++ CLC AS L + M + K+ NV+T++ +I + K
Sbjct: 263 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 322
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++VE E++ E++ PD T+S LI G R+D+A +F+ M K C P+ Y
Sbjct: 323 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 382
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I + +E M+ ++ MS N TY LI GL ++ A ++F++M+
Sbjct: 383 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 442
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ P T + L+ LC YG A+++++ +K + + Y +++ + GK
Sbjct: 443 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 502
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
DL+ + G + IY +I+G C G E A + E G P+ Y+ L
Sbjct: 503 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 562
Query: 521 KLLASNKLESAYNLFRKIK 539
L ++ L ++++
Sbjct: 563 ARLRDGDKAASAELIKEMR 581
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 205/465 (44%), Gaps = 71/465 (15%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+V+ +++ ++ D+ SYN+++ RR VL M K G PD+ TLS ++
Sbjct: 82 LVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLL 141
Query: 206 DSFIRAGQV-----------------------------------YKAIQMLGRLEDFGLK 230
+ + ++ +A+ ++ R+ G +
Sbjct: 142 NGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQ 201
Query: 231 FDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKV-------------------------L 264
D + V+ LC+R + A SL M KGK+ L
Sbjct: 202 PDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNL 261
Query: 265 F----------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
F NV+TYN +I G+ + R+L +++ +P+ +TFS LI+ +
Sbjct: 262 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 321
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G++ +A +++D M ++ PD Y+++I+ + DE ++ M S +C PN+ T
Sbjct: 322 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 381
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y LI G K+++V + +E+F EM RG+V +T T + ++ L G A ++KK
Sbjct: 382 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 441
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G + Y +LL L +GK L ++ +Q+S D Y +I G+C G++E
Sbjct: 442 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 501
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + KG P+ ++Y+ + + E A LFR++K
Sbjct: 502 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 546
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 194/396 (48%), Gaps = 11/396 (2%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L+K++ KG IE +V + ++ + N N++ +A+ LF + + + +V +
Sbjct: 226 LLKKME-KGKIE-----ADVVIYTTIIDALCNYKNVN-DALNLF--TEMDNKGIRPNVVT 276
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN +++ L + +LSDM + +NP++ T S ++D+F++ G++ +A ++ +
Sbjct: 277 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 336
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVV 284
+ D + + ++ C + A +F M K F NV+TYN +I G+ K +V
Sbjct: 337 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 396
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E + +E+ G +++T++ LI+GL +AG D A ++F M G PD Y+ ++
Sbjct: 397 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 456
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
G ++ + ++ + EP++ TY +I G+ K+ KV D ++F + +G+
Sbjct: 457 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 516
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P+ T+ + C G A ++++ ++ G + Y L+R G +L
Sbjct: 517 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 576
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
EM+ G+ D VI L + G+LE + L M
Sbjct: 577 IKEMRSCGFVGDASTISMVINMLHD-GRLEKSYLEM 611
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 100/227 (44%)
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
E+V P + F+ L+ + + + D I + + M+ D +YN +I+ +
Sbjct: 54 EMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRS 113
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
+ M EP++ T + L++G +++++A+ + ++M P+T T
Sbjct: 114 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 173
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
+ + L + A+ + + GC+ L Y ++ L G + L L +M++
Sbjct: 174 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 233
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+D IY +I LCN + +A+ + E KG P+ + Y+ L
Sbjct: 234 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 280
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 33/170 (19%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
D +L +L K+ DA+++F EM+ +PS L + + + ++
Sbjct: 30 DYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGER 89
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+ + L +Y +L+ + + L + +M + GY D ++ G C+ +
Sbjct: 90 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 149
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+ AV ++++ + P+ + ++ L + L NK A L ++ +AR
Sbjct: 150 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRM-VAR 198
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 194/413 (46%), Gaps = 5/413 (1%)
Query: 129 LDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSD 188
+++V K + R EAM L K +V+ D+ SYN ++ L + K +L +
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIREMGRK--SVSPDIVSYNTLINGLCKAKKLKEAVGLLLE 58
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M G P+ T + +MD + G++ +A+++L ++ G D ++ C +
Sbjct: 59 MEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGN 118
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ LF+ M GK + NV+TY+ ++ G +LGQ E VL + G PD +T++
Sbjct: 119 LDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTG 178
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI+GL + GR A+++ + M EKG P YN ++S G + K + M
Sbjct: 179 LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 238
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLD--RGIVPSTGTITSFLEPLCSYGPPHA 425
+ ++ TY L+ GL KV +AL++F M D + P+ T + LC G
Sbjct: 239 KKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 298
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ +++K K G +L Y +LL GK ++LW ++ + G+ + Y +I
Sbjct: 299 AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILID 358
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G C + L A + E G P+ Y+ L L LE A +LF+++
Sbjct: 359 GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEM 411
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 197/437 (45%), Gaps = 14/437 (3%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L+ +K KG ++ +V L ++ N GNL LF K ++ +V +
Sbjct: 90 LLEAMKKKG------FDADVVLYGTLISGFCNNGNLD-RGKELFDEMLGK--GISANVVT 140
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y+ +V L R + VL+ MA+ G++PD+ T + ++D + G+ A+ +L +
Sbjct: 141 YSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMV 200
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQV 283
+ G + + NV+L LC+ V A + M KGK +V+TYN ++ G G+V
Sbjct: 201 EKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA-DVVTYNTLMKGLCDKGKV 259
Query: 284 VEMERVLKEIV--AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
E ++ + P+ TF+ LI GL + GR+ A+++ M +KG + YN
Sbjct: 260 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYN 319
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++ + G E M+ +K + PN TY+ LI G K R + A +F EM
Sbjct: 320 MLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTH 379
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G+ P+ + + LC G A ++++ C+ + ++ ++ G +
Sbjct: 380 GLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFV 439
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+L +M E G D + +I L +G+L+ A +E + GF P LVY L
Sbjct: 440 KELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 499
Query: 522 LLASNKLESAYNLFRKI 538
L + NL ++
Sbjct: 500 LSSKGDTTEIINLLHQM 516
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 163/375 (43%), Gaps = 38/375 (10%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
A+ + DV +Y ++ L + ++L+ M ++G P T ++++ + G
Sbjct: 163 AMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEG 222
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------------- 259
V A ++L + + G K D + N ++ LC + V A LFNSM
Sbjct: 223 LVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFT 282
Query: 260 -------------------------KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
K N++TYN+++ G K G++ E + K+++
Sbjct: 283 FNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVL 342
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
GF P+S T+S LI+G + ++ A +F M+ G P YN ++++ G +
Sbjct: 343 DLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLE 402
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ ++ M + NCEP++ ++ +I G LK+ E+ +M++ G+ P T ++ +
Sbjct: 403 QAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLI 462
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
L G A ++ G Y LL+ LS G +++L H+M G
Sbjct: 463 NRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTV 522
Query: 475 SDGEIYEYVIAGLCN 489
D +I ++ LC+
Sbjct: 523 LDRKIVSTILTCLCH 537
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
G P+ T SI++D F + + A + + GL N ++ LC+ + A
Sbjct: 345 GFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQA 404
Query: 253 SSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
SLF M +++++N +I G K G ++ + ++V G PD+LTFS LI
Sbjct: 405 KSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINR 464
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
L + G +D+A + M G PD Y++++ S GD E + M++ +
Sbjct: 465 LSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLD 524
Query: 372 MDTYTRLISGLLKSRKVADALEVF 395
+ +++ L S + D +E+
Sbjct: 525 RKIVSTILTCLCHSIQEVDVMELL 548
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 187/417 (44%), Gaps = 20/417 (4%)
Query: 124 NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMC 183
+VDL V+ KV+ G + + ++ ++ L + F
Sbjct: 141 HVDLGFSVLAKVIKLG-------------------LQPTIITFTTLINGLCKAGEFAQAL 181
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
+ DM G PD+ T + +++ + G+ A ++ ++ + G + D + + ++ L
Sbjct: 182 ELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSL 241
Query: 244 CQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C+ V A +F+ MK K + V++Y +I G + E +L E+ + PD
Sbjct: 242 CKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDI 301
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+TFS LI+ + G + +A V TM E G P+ YN+++ Y + E K +
Sbjct: 302 VTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDV 361
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M + C+P++ +Y+ LI+G +++ +A ++F EM+ +G+ P+T + T+ + C G
Sbjct: 362 MITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGK 421
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A ++K G L Y +LL G G L+ MQ + + +Y
Sbjct: 422 LREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTI 481
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I +C G L +A + E G P +Y+ + N L L+ A FRK++
Sbjct: 482 LIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKME 538
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 178/386 (46%), Gaps = 16/386 (4%)
Query: 163 VKSYNVIVKALGR-RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+ +N ++ A+ R R+++D + ++ M G++P+ TL+I+++ F V +L
Sbjct: 90 IIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVL 149
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++ GL+ + ++ LC+ A LF+ M + +V TY +I+G K+
Sbjct: 150 AKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKM 209
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ ++K++ G PD +T+S LI+ L + +++A+++F MK KG P +Y
Sbjct: 210 GETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSY 269
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++I S + E M+S N P++ T++ LI K V +A V + M +
Sbjct: 270 TSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTE 329
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV-------GCKLSLTAYKLLLRRLS 453
G+ P+ T S + ++ M +ARK+ GCK + +Y +L+
Sbjct: 330 MGVEPNVITYNSLMH-------GYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYC 382
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
+ L++EM G + Y +I C +G+L A + ++ G+ P
Sbjct: 383 MVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLC 442
Query: 514 VYSKLSNKLLASNKLESAYNLFRKIK 539
YS L L A+ LFR ++
Sbjct: 443 TYSVLLEGFCKQGYLGKAFRLFRAMQ 468
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 164/348 (47%), Gaps = 1/348 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y+ ++ +L + + + ++ S M +G++P + + + ++ + +A ML
Sbjct: 230 DVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAML 289
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ + D + ++++ C+ +V A + +M + V NV+TYN ++ G+S
Sbjct: 290 NEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQ 349
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+VVE ++ ++ G PD ++S LI G RID+A ++F+ M +G P+T +Y
Sbjct: 350 MEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSY 409
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+I + +G E + +K M + P++ TY+ L+ G K + A +F M
Sbjct: 410 TTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQG 469
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+ P+ T ++ +C G + A ++ + G + + Y ++ L G
Sbjct: 470 TYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDE 529
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L+ + +M+E G P + Y +I G AV ++ E KGF
Sbjct: 530 ALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGF 577
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 120/248 (48%), Gaps = 8/248 (3%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ Y++ ++ + RK FD M G PD+ + SI+++ + ++ +A Q+
Sbjct: 343 MHGYSLQMEVVEARKLFDVM-------ITRGCKPDVFSYSILINGYCMVKRIDEAKQLFN 395
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+ GL + S ++ CQ + A LF M L ++ TY++++ G+ K G
Sbjct: 396 EMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQG 455
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ + R+ + + P+ + ++ LI+ + ++G ++ A ++F + G PD Y
Sbjct: 456 YLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYT 515
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I+ G DE ++ ++ M C PN +Y +I G L+ + + A+++ EM D+
Sbjct: 516 TIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDK 575
Query: 402 GIVPSTGT 409
G V GT
Sbjct: 576 GFVADEGT 583
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 1/220 (0%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDA-IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
P + F+ L+ + R + DA I + M+ G P+T N +I+ + + D
Sbjct: 88 PCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFS 147
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
+ +P + T+T LI+GL K+ + A ALE+F++M+ RG P T T+ + LC
Sbjct: 148 VLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLC 207
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
G AA + KK +VGC+ + Y L+ L LD++ M+ G
Sbjct: 208 KMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVV 267
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
Y +I GLC+ + + A ++ E P + +S L
Sbjct: 268 SYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLL 307
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 127/286 (44%), Gaps = 1/286 (0%)
Query: 251 AASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVL-KEIVAEGFSPDSLTFSFLI 309
A +S + + K L ++ +N ++S ++ Q + L K++ G SP++ T + LI
Sbjct: 74 ALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILI 133
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
+D V + + G P + +I+ G+F + ++ + M + C+
Sbjct: 134 NCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQ 193
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P++ TYT +I+GL K + A A + ++M + G P T ++ ++ LC + A+ +
Sbjct: 194 PDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDI 253
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ + G ++ +Y L++ L F + + +EM D + +I C
Sbjct: 254 FSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCK 313
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
G + A V++ G P+ + Y+ L + ++ A LF
Sbjct: 314 EGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLF 359
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 86/192 (44%), Gaps = 1/192 (0%)
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA-LEVFEEMLDRGIVPST 407
S + D+ + + M P + + +L+S +++ R+ DA + + ++M G+ P+T
Sbjct: 67 SFRNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNT 126
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T+ + C + K K+G + ++ + L+ L G+ L+L+ +
Sbjct: 127 CTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDD 186
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
M G D Y +I GLC +G+ A ++++ G P + YS L + L
Sbjct: 187 MVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRL 246
Query: 528 LESAYNLFRKIK 539
+ A ++F +K
Sbjct: 247 VNEALDIFSYMK 258
>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
Length = 798
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 193/400 (48%), Gaps = 24/400 (6%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PN A +YNV++ L +R + +M + G+ P+++T +I++ S AGQ+ +
Sbjct: 207 PNRA----TYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKE 262
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVI 274
A +L +ED G D + N L LC+ V A +++ G + + Y+ +I
Sbjct: 263 AENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLI 322
Query: 275 SGWSKLGQVVEMERVLKEIVAEG-FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
G G+ E + E++ + FSPD + ++ +I G AGRIDDA FD MKEK
Sbjct: 323 DGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRF 382
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
PDT YN ++ GD D M+ N + +T+T +I GL K + V +A++
Sbjct: 383 TPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQ 442
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLC-SYGPPHAAMMMYKKARKVG------CKLSLTAYK 446
VF+ M++ G P+ T ++ L ++ A M+ YK +VG +L+L A +
Sbjct: 443 VFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKM--EVGNNPSLFLRLTLGANQ 500
Query: 447 L-----LLRRLSGFGKCGMLL---DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ L + + + G +L L + +SG D Y ++ GLC + L+ A+
Sbjct: 501 VKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALR 560
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ E KGF + Y L + LL +++ A LF+ I
Sbjct: 561 LFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDI 600
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 181/447 (40%), Gaps = 88/447 (19%)
Query: 182 MCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE-DFGLKFDAESLNVVL 240
M + ++D G+ P ++ + AG+ ++A+ R+E +FG + N VL
Sbjct: 121 MYDAIADAQAAGLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVL 180
Query: 241 WCLCQRLH-VGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
L V A +L+N M L N TYN+++ G K G V+ ++ E++ G
Sbjct: 181 RVLVASGGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGI 240
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
+P+ T + L+ + AG++ +A + ++M++KGC PD YNA +S G DE ++
Sbjct: 241 TPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIE 300
Query: 359 ----------YYKGMSSYNC---------------------------EPNMDTYTRLISG 381
+ G+ Y+C P++ YT +I G
Sbjct: 301 RLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRG 360
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP------------------- 422
++ ++ DA F+EM ++ P T + L+ LC G
Sbjct: 361 CAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLD 420
Query: 423 --PHA--------------AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
H AM ++ +VGC ++ Y +L+ L + L++
Sbjct: 421 TNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFY 480
Query: 467 EMQESGYPS-------------DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
+M+ PS D E + ++ +C GQ+ A ++ + G P +
Sbjct: 481 KMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVV 540
Query: 514 VYSKLSNKLLASNKLESAYNLFRKIKI 540
Y+ L N L L+ A LFR++++
Sbjct: 541 TYNTLLNGLCKVRNLDGALRLFRELQV 567
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 138/339 (40%), Gaps = 40/339 (11%)
Query: 252 ASSLFNSMKGKVLFNVMT--YNIVISGWSKLGQVVEMERVL-KEIVAEGFSPDSLTFSFL 308
A F+ M+G+ T YN V+ G VV + L +VA G P+ T++ L
Sbjct: 156 AVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVPLALALYNRMVAAGCLPNRATYNVL 215
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
++GL + G DA+++FD M ++G P+ + ++S+ + G E M C
Sbjct: 216 MDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGC 275
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG-IVPSTGTITSFLEPLCSYGPPHAAM 427
P+ TY +SGL K+ +V +A+E E + G V + ++ L G
Sbjct: 276 PPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGF 335
Query: 428 MMYKKA-RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
Y + + + Y +++R + G+ + EM+E + D Y ++
Sbjct: 336 QCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKA 395
Query: 487 LCNIGQLENAVLVMEESLR--------------KGFC---------------------PS 511
LC+ G L+ A +M E + G C P+
Sbjct: 396 LCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPT 455
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYARRL 550
+ Y+ L + L +++LE A LF K+++ RL
Sbjct: 456 VMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRL 494
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 106/479 (22%), Positives = 203/479 (42%), Gaps = 37/479 (7%)
Query: 92 VDEFLLPEERLR--GVFLQKLKGKGVIEDALWNV---------------NVDLSLDVV-G 133
VDE + E LR G F+ LKG + D L+ D S D+V
Sbjct: 295 VDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLY 354
Query: 134 KVVNRGNLSG---EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
++ RG + FF+ +K D YN ++KAL D +++S+MA
Sbjct: 355 TIMIRGCAEAGRIDDAFAFFD-EMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMA 413
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+ V D T +I++ + V +A+Q+ + + G + NV++ L + +
Sbjct: 414 QNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLE 473
Query: 251 AASSLFNSMK---GKVLFNVMTYNI-----------VISGWSKLGQVVEMERVLKEIVAE 296
A LF M+ LF +T ++ + GQV++ ++L+ I+
Sbjct: 474 EARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDS 533
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
G PD +T++ L+ GL + +D A+ +F ++ KG D Y +I + + +++
Sbjct: 534 GVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDA 593
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV-FEEMLDRGIVPSTGTITSFLE 415
M ++ + P++ Y ++ L + K++ A+ F+ +L + + + + +
Sbjct: 594 MTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFWFDHLLKKYNLSAQDEVIASAR 653
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
G A+ K + ++ Y + L L + L ++H ++ESG
Sbjct: 654 KKFEEGSLDEAVRELIKIDQEYGSVNSCPYTIWLIGLIQARRIDDALKIFHILEESGIDI 713
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
++ LC L++AV VM +L K F SR V ++L + L ++ + A L
Sbjct: 714 TPACCAHLSKYLCWEKNLDSAVDVMLYTLNKRFIMSRHVGNRLLSSLCIRHRRKDAQAL 772
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 182/391 (46%), Gaps = 1/391 (0%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FF+ +K + D SY ++ L + + + M E P + ++ +
Sbjct: 5 FFH-ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 63
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM 268
AG+ A ++L RL + G S N +L CL ++ V A SLF MK N
Sbjct: 64 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSS 123
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TYNI+I G+V E R+L E+ P+ LT + +++ L +A ++++A ++F++
Sbjct: 124 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 183
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
++GC PD Y ++I G DE + ++ M N YT LI +
Sbjct: 184 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 243
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
D ++F+E++ RG P + ++++ + G M+++ R G + +Y +L
Sbjct: 244 EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 303
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L+ G+ +++H M++ G+ D Y V+ G C G++ A ++EE K
Sbjct: 304 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 363
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P+ Y + + L ++L+ AY LF + K
Sbjct: 364 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 394
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 182/416 (43%), Gaps = 36/416 (8%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++H ++ ++ + N++V L + + + + ++ G NPD T ++D + GQ
Sbjct: 148 MEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQ 207
Query: 214 VYKAIQML-------------------------GRLED----------FGLKFDAESLNV 238
V +A ++ GR ED G K D LN
Sbjct: 208 VDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNT 267
Query: 239 VLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
+ C+ + V +F ++ L +V +Y+I+I G +K GQ E + + +G
Sbjct: 268 YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG 327
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
F+ D+ ++ +++G ++G++ A E+ + MKEK P Y A++ + DE
Sbjct: 328 FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAY 387
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
++ S E N+ Y+ LI G K ++ +A + EEM+ +G+ P+ T S L+ L
Sbjct: 388 MLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDAL 447
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
+ A++ ++ +++ C + Y +L+ L K W +MQ+ G +
Sbjct: 448 VKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNV 507
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
Y +I+GL +G + +A + E G P ++ L + +N+ AY
Sbjct: 508 VTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 563
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 184/378 (48%), Gaps = 2/378 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V S+N I+ LG+++ D ++ M K+ P+ T +I++D G+V +A ++L
Sbjct: 88 VVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILD 146
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLG 281
+E L + ++N+++ LC+ + A +F S + + +TY +I G K G
Sbjct: 147 EMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKG 206
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
QV E R+ ++++ G + + + ++ LI GR +D ++F + +GC PD N
Sbjct: 207 QVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLN 266
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+ G+ ++ ++ + SY P++ +Y+ LI GL K+ + + +F M +
Sbjct: 267 TYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQ 326
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G + ++ C G H A + ++ ++ + ++ Y ++ L+ +
Sbjct: 327 GFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEA 386
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+ E + G + +Y +I G +G+++ A L++EE ++KG P+ ++ L +
Sbjct: 387 YMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDA 446
Query: 522 LLASNKLESAYNLFRKIK 539
L+ + ++ A F+ +K
Sbjct: 447 LVKAEEINEALVCFQSMK 464
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 109/257 (42%), Gaps = 36/257 (14%)
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
+ E+ A+G PD ++++ +I L +AGR+ +A E+F M+ + P AYN +I Y
Sbjct: 4 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 63
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
S G F+ DA ++ E + +RG +PS
Sbjct: 64 GSAGRFE-----------------------------------DAYKLLERLRERGCIPSV 88
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
+ S L L A+ +++ +K + + + Y +++ L G+ + E
Sbjct: 89 VSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDE 147
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
M+ + + ++ LC +LE A + E + ++G P + Y L + L +
Sbjct: 148 MEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQ 207
Query: 528 LESAYNLFRKIKIARQN 544
++ AY LF K+ A N
Sbjct: 208 VDEAYRLFEKMLDAGHN 224
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 97/193 (50%), Gaps = 5/193 (2%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA +LF K + +V Y+ ++ G+ D +L +M K+G+ P++ T +
Sbjct: 385 EAYMLF--EEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 442
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++D+ ++A ++ +A+ +++ + + ++++ LC+ A + M+ +
Sbjct: 443 LLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQG 502
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
L NV+TY +ISG +K+G + + + + A G PD+ +F+ LIEG+ A R +A
Sbjct: 503 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAY 562
Query: 323 EV--FDTMKEKGC 333
+ DT C
Sbjct: 563 QAGWLDTTMRLDC 575
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 179/392 (45%), Gaps = 39/392 (9%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
++ +M G +PD+++ +++ F ++G + L R+ + GL +A N ++ CLC
Sbjct: 16 IVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLC 75
Query: 245 QRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSK-------LGQVVEMER--------- 288
+ + A S M NV++YNI+I G+ K L + EME
Sbjct: 76 KAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHA 135
Query: 289 -------------------VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
V E+ A+G PD + F+ L+ GL RA +I +A E+F +M
Sbjct: 136 YSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMN 195
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
+GC PD YN +I+ DE + + M + P TYT LI L K ++
Sbjct: 196 SRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQ 255
Query: 390 DALEVFEEMLDRGIVPSTGTITSFL---EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
A EVFE+M + G P T S L LC P A M+++ R G ++ Y
Sbjct: 256 QAYEVFEKMAE-GPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYN 314
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
LL L K ++L + M + + YE +I+ LC Q+E A ++ K
Sbjct: 315 TLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDK 374
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GF PS ++ L ++L + +L+ A+ L++++
Sbjct: 375 GFVPSLKIWEVLLSRLARAGRLDDAFELYKEM 406
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 169/388 (43%), Gaps = 38/388 (9%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ A +V SYN+I+ + + + L +M + G P S ++ SF + G V KA
Sbjct: 93 HCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKA 152
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
+ + + G + D + NV+L L + + A LF SM + +V+TYN +I+G
Sbjct: 153 MDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAG 212
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE------ 330
K ++ E +L+ + E SP +T++ LI+ L + R+ A EVF+ M E
Sbjct: 213 LCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCT 272
Query: 331 -------------------------------KGCGPDTNAYNAVISNYISVGDFDECMKY 359
+G P YN ++ +S + M+
Sbjct: 273 EPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMEL 332
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
M PNM TY LIS L K+ +V +A ++ M D+G VPS L L
Sbjct: 333 TYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLAR 392
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
G A +YK+ ++ C+ + + +LL + G D +M ++G D
Sbjct: 393 AGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFT 452
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKG 507
Y+ ++ GLC G+ + A ++EE +R G
Sbjct: 453 YDKLVVGLCWQGKADQARKLVEELVRDG 480
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 119/256 (46%), Gaps = 1/256 (0%)
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V + E +++E+ GFSPD + LI G ++G D M E G P+ YN
Sbjct: 10 VAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNN 69
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+IS G E Y K M + C PN+ +Y +I G K+R + AL EM + G
Sbjct: 70 LISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALAFLREMEELG 128
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P+ +S ++ C G AM ++ + GC+ + + +LL L K
Sbjct: 129 HPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAR 188
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+L+ M G D Y +IAGLC +L+ AV ++E ++ P+ + Y+ L + L
Sbjct: 189 ELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHL 248
Query: 523 LASNKLESAYNLFRKI 538
+L+ AY +F K+
Sbjct: 249 CKFARLQQAYEVFEKM 264
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 176/357 (49%), Gaps = 3/357 (0%)
Query: 185 VLSDMAKEGVN--PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWC 242
+L+D ++ GVN P + T SI++D + G+ +A ++ ++ G+ D S + ++
Sbjct: 222 MLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHG 281
Query: 243 LCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
C + LF+ M + V +++T++++I K G+V E +++L+ ++ G P+
Sbjct: 282 FCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPN 341
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+T++ LI+G G ++ A E+F +M KG PD +Y +I+ Y E M Y
Sbjct: 342 LITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYN 401
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M PN+ TY L+ GL + KV DA ++F M G+ ++ FL+ LC
Sbjct: 402 EMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKND 461
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
AM ++ + + KL++ Y L+ L GK +L+ ++ + G D Y
Sbjct: 462 CLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYN 521
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+I G C +GQ++NA ++ E+ G P + Y+ L NKLE L K+
Sbjct: 522 IMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKM 578
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 204/443 (46%), Gaps = 45/443 (10%)
Query: 139 GNLSGEAMVLFFNWAIK-HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
GN++ FF+ ++ HP + S+N ++ L + + + ++ ++M G++PD
Sbjct: 68 GNITAIQAFHFFDLMMRSHP--IPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPD 125
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
L TLSI+ + +V +A+ + + G + + ++ LC + A+ LF
Sbjct: 126 LFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFL 185
Query: 258 SM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG------FSPDSLTFSFLIE 310
M K N +TY +I G + G V ++ KE++ + P +T+S +I+
Sbjct: 186 RMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIID 245
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
GL + GR D+A E+F+ MK +G PD +Y+ +I + G +D+ + M +P
Sbjct: 246 GLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQP 305
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA----- 425
+M T++ LI L K KV +A ++ E M+ RGIVP+ T S ++ C G ++
Sbjct: 306 DMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELF 365
Query: 426 ------------------------------AMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
AM +Y + +VG ++T Y LL+ L
Sbjct: 366 LSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQK 425
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
GK G L+ M+ G ++ +IY + GLC L A+ + E F + Y
Sbjct: 426 GKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENY 485
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
S L + L + KLE+A+ LF K+
Sbjct: 486 SCLIDGLCKAGKLETAWELFEKL 508
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 163/336 (48%), Gaps = 1/336 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K + DV SY+ ++ +D ++ +M +GV PD+ T S+++D+ + G+
Sbjct: 263 MKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGK 322
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNI 272
V +A ++L + G+ + + N ++ C + +A LF SM K L + ++Y
Sbjct: 323 VTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTT 382
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I+G+ K +V E + E++ G SP+ T+ L++GL + G++ DA ++F MK G
Sbjct: 383 LINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYG 442
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
++ Y + E M+ + + SYN + N++ Y+ LI GL K+ K+ A
Sbjct: 443 VSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAW 502
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
E+FE++ G+ P T + C G A ++++K + GC + AY LL
Sbjct: 503 ELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGF 562
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
K ++ L H+M + + V+ LC
Sbjct: 563 CEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLC 598
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 182/390 (46%), Gaps = 7/390 (1%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N V +Y++I+ L + D + +M +G+ PD+ + S ++ F AG+ ++
Sbjct: 232 NCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQS 291
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
+ + D G++ D + +V++ LC+ V A L M + ++ N++TYN +I G
Sbjct: 292 KHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDG 351
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ +G + + + ++G PD ++++ LI G + ++ +A+ +++ M + G P+
Sbjct: 352 FCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPN 411
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y ++ G + K + M +Y N Y + GL K+ + +A+E+F
Sbjct: 412 VTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFN 471
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
E+ + + ++ LC G A +++K + G + + Y +++ GF
Sbjct: 472 ELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIH---GFC 528
Query: 457 KCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
K G + + L+ +M+E+G D Y ++ G C +LE + ++ + ++K P+
Sbjct: 529 KVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAA 588
Query: 514 VYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
+ + + L K + +L K + R
Sbjct: 589 SCTIVVDMLCKDEKYKKFVDLLPKFPVQRH 618
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%)
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
++++ LL L+ L L++EM+ +G D + LCN+ ++ A+ M
Sbjct: 91 ISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMA 150
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
LR+G+ P+ + Y+ L L +++ A LF +++
Sbjct: 151 GILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQ 188
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 204/441 (46%), Gaps = 13/441 (2%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+EDAL + LS ++V V+ R E FF W + + V ++N+++ L +
Sbjct: 51 MEDALEKLAPFLSSEIVNDVM-REQRRPELGFRFFIWTTRRRSFRSWV-THNLVIDMLAK 108
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
FD +L ++ + T S+++ ++ ++G KA++ G+++DFG K D +
Sbjct: 109 DDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFT 168
Query: 236 LNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
N +L + Q+ A +++N M K N T+ I+++G K G+ + ++ E+
Sbjct: 169 YNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMT 228
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
+G P+++ ++ ++ GL +A R DD + +TMK GC PD+ NA++ + +G D
Sbjct: 229 QKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQID 288
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E + + Y+ LI GL ++++ + E +M GI P T +
Sbjct: 289 EAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILI 348
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ----- 469
C G A+ M + G Y L++ GF G LLD +Q
Sbjct: 349 RGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIK---GFCDVG-LLDKARSLQLEISK 404
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
+P+ Y +I G+C G L+ A + + G PS + ++ L + L + +LE
Sbjct: 405 NDCFPTSC-TYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELE 463
Query: 530 SAYNLFRKIKIARQNDYARRL 550
A +LF K++I + RL
Sbjct: 464 EARHLFYKMEIGKNPSLFLRL 484
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 188/460 (40%), Gaps = 84/460 (18%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN I+ + +++ F V + M K NP+ T I+++ + G+ A++M
Sbjct: 165 DVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMF 224
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
+ G+ + ++L LCQ L N+MK + +T N ++ G+ KL
Sbjct: 225 DEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKL 284
Query: 281 GQVVEMERVLKEIVAEGF-----------------------------------SPDSLTF 305
GQ+ E +L+ EG+ PD + +
Sbjct: 285 GQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLY 344
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LI G G +D A+ + + M ++G PDT YNA+I + VG D+ +S
Sbjct: 345 TILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISK 404
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
+C P TYT LI G+ ++ + +A ++F +M + G PS T + ++ LC G
Sbjct: 405 NDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEE 464
Query: 426 AMMMYKK------------------------------ARKVGCKLSLTAYKLLLR----- 450
A ++ K R L L AYKLL++
Sbjct: 465 ARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSG 524
Query: 451 ----------RLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
++GF K + L+ E+Q G+ D Y +I G + + E+A
Sbjct: 525 VVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAF 584
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
V+++ ++ G PS VY L KL A++L+ K
Sbjct: 585 RVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLK 624
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 104/485 (21%), Positives = 180/485 (37%), Gaps = 93/485 (19%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+K Y+ ++ L R K +D + M K G+ PD+ +I++ F G V A+ ML
Sbjct: 306 IKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLN 365
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL-FNSMKGKVLFNVMTYNIVISGWSKLG 281
+ GL D N ++ C + A SL K TY I+I G + G
Sbjct: 366 DMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNG 425
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF---------------- 325
+ E ++ ++ G SP +TF+ LI+GL +AG +++A +F
Sbjct: 426 LLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLS 485
Query: 326 ------------DTMKEKGCG--------------------PDTNAYNAVISNYISVGDF 353
TM E+ C PD YN +I+ + +
Sbjct: 486 QGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNI 545
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
+ K ++ + P+ TY LI G + + DA V ++M+ G PS+
Sbjct: 546 NGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCL 605
Query: 414 LEPLCSYGPPHAAMMMYKK-------------------------ARKVGCKLSL------ 442
+ C G A ++ K + V C L +
Sbjct: 606 MTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNN 665
Query: 443 ---TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
Y + L L + L ++ ++E + +I GLC G LE AV +
Sbjct: 666 FEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDI 725
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA----------RQNDYARR 549
+L KGF + ++L L+ +K++ A +L ++ A R Y
Sbjct: 726 FLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYDLDEYLHHRIKSYLLS 785
Query: 550 LWRSK 554
+W+++
Sbjct: 786 VWKAQ 790
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 183/389 (47%), Gaps = 3/389 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K N+ D+ SYN I+ L + K + ++L +M P+ T I+MD + G+
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
V +A+++LG ++ GL+ D + ++ C + + +LF+ M K + NV+ Y+
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I+G+ K G E VL + G PD T++ +I GL + GR A+++FD M EKG
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P T YN +I+ G + K ++ M + +Y LI GL + K+ +A+
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240
Query: 393 EVFEEMLDRG--IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
++F +L+ G + P T + ++ LC G A+ +Y + G +L +L+
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
G ++LW + + G Y +I G C + L A + G P
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSP 360
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ Y+ L L + LE A LF+++K
Sbjct: 361 TLFDYNTLMASLCKESSLEQARRLFQEMK 389
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 185/384 (48%), Gaps = 5/384 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ +V Y+ ++ ++ + VL M + G+ PD+ T + ++ + G+ KA+
Sbjct: 111 ISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKAL 170
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
+ + + G + + NV++ LC+ +G A +F +M KGK L V++YN +I G
Sbjct: 171 DLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRL-EVVSYNTLIMG 229
Query: 277 WSKLGQVVEMERVLKEIVAEG--FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G++ E ++ ++ +G PD +TF+ +I+GL + GR+D A+E++DTM E+G
Sbjct: 230 LCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSF 289
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
+ + +I YI G D+ M+ +K + P+ TY+ +I G K + A +
Sbjct: 290 GNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGL 349
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F M G+ P+ + + LC A ++++ ++ C+ ++ +++
Sbjct: 350 FSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLK 409
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G +L ++MQ+ G D Y I L +GQ+E A + + G P V
Sbjct: 410 AGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHV 469
Query: 515 YSKLSNKLLASNKLESAYNLFRKI 538
Y L ++++E NL R++
Sbjct: 470 YDSLIKGFGLNDEIEEVINLLRQM 493
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 138/289 (47%), Gaps = 8/289 (2%)
Query: 135 VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
+ N G L EAM LF + V DV ++N +++ L + D + M + G
Sbjct: 230 LCNNGKLD-EAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGS 288
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
+L T I++ +I++G + KA+++ R+ GL + + +V++ C+ + A
Sbjct: 289 FGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKG 348
Query: 255 LFNSMK----GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
LF+ MK LF+ YN +++ K + + R+ +E+ PD+++F+ +I+
Sbjct: 349 LFSRMKISGLSPTLFD---YNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMID 405
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
G +AG I A E+ + M++ G PD Y++ I+ +G +E + M + P
Sbjct: 406 GTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITP 465
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ Y LI G + ++ + + + +M D G++ S L LC+
Sbjct: 466 DNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCN 514
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 191/415 (46%), Gaps = 38/415 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV--NPDLETLSIVMDSFIRAGQVYKAIQ 219
DV SY++++K+L + ++L MA+ G +P++ + V+D F + G V KA
Sbjct: 184 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACD 243
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
+ + G+ D + N V+ LC+ + A + M K VL N TYN +I G+S
Sbjct: 244 LFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS 303
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
GQ E RV KE+ PD +T S L+ L + G+I +A +VFDTM KG PD
Sbjct: 304 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 363
Query: 339 AYNAVISNYISVG-------------------DF----------------DECMKYYKGM 363
+YN +++ Y + G DF D+ M + M
Sbjct: 364 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 423
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ +P++ TY +I+ L + K+ DA+E F +M+D+G+ P ++ C++G
Sbjct: 424 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSL 483
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A + + G L + + ++ L G+ +++ G D +Y +
Sbjct: 484 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNML 543
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ G C +G++E A+ V + + G P+ + Y L N +++ +LFR++
Sbjct: 544 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 598
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 197/418 (47%), Gaps = 5/418 (1%)
Query: 125 VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCN 184
V LS+ ++G + G + EA +F A+K N DV SYN+++ + M +
Sbjct: 328 VTLSM-LMGSLCKYGKIK-EARDVFDTMAMKGQN--PDVFSYNIMLNGYATKGCLVDMTD 383
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ M +G+ PD T ++++ ++ G + KA+ + + D G+K D + V+ LC
Sbjct: 384 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 443
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ + A FN M + V + YN +I G+ G +++ + ++ EI+ G D +
Sbjct: 444 RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 503
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
FS +I L + GR+ DA +FD G PD YN ++ Y VG ++ ++ + M
Sbjct: 504 FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAM 563
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
S EPN+ Y L++G K ++ + L +F EML RGI PST + ++ L G
Sbjct: 564 VSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRT 623
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A M + + + G + + Y ++LR L + L+ E++ + +
Sbjct: 624 VPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 683
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
I G+ ++E A + R PS + YS + L+ +E A ++F ++ A
Sbjct: 684 IDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 741
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 182/382 (47%), Gaps = 3/382 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D+ +YN +V AL + + D L M + V P+ T + ++ + GQ +A+
Sbjct: 253 IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAV 312
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
++ + + D +L++++ LC+ + A +F++M KG+ +V +YNI+++G
Sbjct: 313 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP-DVFSYNIMLNG 371
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
++ G +V+M + ++ +G +PD TF+ LI+ G +D A+ +F+ M++ G PD
Sbjct: 372 YATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPD 431
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y VI+ +G D+ M+ + M P+ Y LI G + A E+
Sbjct: 432 VVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELIS 491
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
E+++ G+ +S + LC G A ++ VG Y +L+ G
Sbjct: 492 EIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVG 551
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K L ++ M +G + Y ++ G C IG+++ + + E L++G PS ++YS
Sbjct: 552 KMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYS 611
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
+ + L + + A F ++
Sbjct: 612 IIIDGLFEAGRTVPAKMKFHEM 633
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 164/387 (42%), Gaps = 45/387 (11%)
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF---------------------- 231
++P T +I+MD RA + A+ G+L GL+
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169
Query: 232 --------------DAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLF-NVMTYNIVI 274
D S +++L LC + G A L M G V NV+ YN VI
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ K G V + + KE+V G PD +T++ ++ L +A +D A M K
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 289
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ YN +I Y S G + E ++ +K M ++ P++ T + L+ L K K+ +A +V
Sbjct: 290 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 349
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F+ M +G P + L + G ++ G + +L++
Sbjct: 350 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK---A 406
Query: 455 FGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
+ CGML + +++EM++ G D Y VIA LC IG++++A+ + + +G P
Sbjct: 407 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 466
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y+ L L A L +I
Sbjct: 467 KYAYNCLIQGFCTHGSLLKAKELISEI 493
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 160/338 (47%), Gaps = 14/338 (4%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
+ +++ GV D + V +L +GK+ +AM F N I VA D
Sbjct: 418 IIFNEMRDHGVKPDVVTYRTVIAALCRIGKM-------DDAMEKF-NQMIDQ-GVAPDKY 468
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN +++ ++S++ G++ D+ S ++++ + G+V A +
Sbjct: 469 AYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLT 528
Query: 225 EDFGLKFDAESLNVVL--WCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLG 281
+ GL DA N+++ +CL ++ A +F++M + NV+ Y +++G+ K+G
Sbjct: 529 VNVGLHPDAVVYNMLMDGYCLVGKME--KALRVFDAMVSAGIEPNVVGYGTLVNGYCKIG 586
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ E + +E++ G P ++ +S +I+GL AGR A F M E G D YN
Sbjct: 587 RIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYN 646
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
V+ FDE + +K + + N + N+ T +I G+ ++R+V +A ++F +
Sbjct: 647 IVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS 706
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
+VPS T + + L G A M+ + GC+
Sbjct: 707 RLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 744
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 88/193 (45%), Gaps = 1/193 (0%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
A+ + +V Y +V + D ++ +M + G+ P SI++D AG
Sbjct: 562 AMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAG 621
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYN 271
+ A + + G+ D + N+VL L + A LF ++ V N++T N
Sbjct: 622 RTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLN 681
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I G + +V E + + I P +T+S +I L + G +++A ++F +M+
Sbjct: 682 TMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 741
Query: 332 GCGPDTNAYNAVI 344
GC P++ N V+
Sbjct: 742 GCEPNSRLLNHVV 754
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 139/320 (43%), Gaps = 26/320 (8%)
Query: 89 SRAVDEFLLPEERLRGVFLQK-------LKGKGVIEDALWNVNVDLSLDVV--GKVVNRG 139
++ +D+ + P++ +Q LK K +I + + N + LD+V ++N
Sbjct: 456 NQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNN---GMHLDIVFFSSIIN-- 510
Query: 140 NLSGEAMVL----FFNWAIK---HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKE 192
NL V+ F+ + HP D YN+++ + V M
Sbjct: 511 NLCKLGRVMDAQNIFDLTVNVGLHP----DAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 566
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
G+ P++ +++ + + G++ + + + + G+K ++++ L + A
Sbjct: 567 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPA 626
Query: 253 SSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
F+ M + + ++ TYNIV+ G K E + KE+ A + +T + +I+G
Sbjct: 627 KMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 686
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
+ + R+++A ++F ++ P Y+ +I+N I G +E + M + CEPN
Sbjct: 687 MFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 746
Query: 372 MDTYTRLISGLLKSRKVADA 391
++ LLK ++ A
Sbjct: 747 SRLLNHVVRELLKKNEIVRA 766
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 191/416 (45%), Gaps = 20/416 (4%)
Query: 125 VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCN 184
VDL V+ KV+ G + + ++ ++ L + F
Sbjct: 144 VDLGFSVLAKVIKLG-------------------LQPTIVTFTTLINGLCKVGEFAQAVE 184
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ DM +G PD+ T + +++ + G+ A +L ++E+ G + + + + ++ LC
Sbjct: 185 LFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLC 244
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ V A +F+ MK K + ++ TY +I G K + E +L E+ + PD +
Sbjct: 245 RDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIV 304
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
TF+ L++ + G++ +A+ V TM E G P+ Y++++ Y D E K + M
Sbjct: 305 TFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVM 364
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ C+PN+ +Y LI+G K++++ +A+++F EM+ +G+ P+ + + + C G
Sbjct: 365 ITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKL 424
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A +++ G L Y +LL G G L+ MQ + + +Y +
Sbjct: 425 REAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTIL 484
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ +C G ++A + E +G P +Y+ + N L L+ A FR ++
Sbjct: 485 VHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNME 540
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 174/340 (51%), Gaps = 3/340 (0%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
R L EA+ +F +K ++ D+ +Y +++ L + + +L++M + PD
Sbjct: 245 RDRLVNEALDIF--SYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPD 302
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ T ++++D+F + G+V +A+ +L + + G++ + + + +++ V A LF+
Sbjct: 303 IVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFH 362
Query: 258 SMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
M K N+ +YNI+I+G+ K ++ E ++ E++ +G +P++++++ LI G + G
Sbjct: 363 VMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLG 422
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
++ +A ++F M G PD Y+ ++ + G + + ++ M S +PN+ YT
Sbjct: 423 KLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYT 482
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
L+ + KS DA ++F E+ +G+ P T+ + LC G A+ ++
Sbjct: 483 ILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEAD 542
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
GC +Y +++R L L L EM++ G+ +D
Sbjct: 543 GCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIAD 582
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 166/354 (46%), Gaps = 5/354 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PN+ +Y+ ++ +L R + + ++ S M +G++PD+ T + ++ + +
Sbjct: 230 QPNMV----TYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWK 285
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVI 274
+A +L + + D + NV++ C+ V A + +M + V NV+TY+ ++
Sbjct: 286 EASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLM 345
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+S VVE ++ ++ +G P+ +++ LI G +A RID+A+++F+ M +G
Sbjct: 346 YGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLT 405
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ +YN +I + +G E ++ M + P++ TY+ L+ G K + A +
Sbjct: 406 PNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRL 465
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F M + P+ T + +C G A ++ + G + + Y ++ L
Sbjct: 466 FRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCK 525
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
G L+ + M+ G P D Y +I GL A+L++ E +GF
Sbjct: 526 EGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGF 579
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 136/308 (44%), Gaps = 35/308 (11%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N+ T +I ++ + +L +V VL +++ G P +TF+ LI GL + G A+E+F
Sbjct: 127 NIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELF 186
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M KGC PD YN +I+ +G+ K M C+PNM TY+ LI L +
Sbjct: 187 DDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRD 246
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY------------------------- 420
R V +AL++F M +GI P T TS ++ LC +
Sbjct: 247 RLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTF 306
Query: 421 ----------GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
G A+ + K ++G + ++ Y L+ S + L+H M
Sbjct: 307 NVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMIT 366
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G + Y +I G C +++ A+ + E + +G P+ + Y+ L + KL
Sbjct: 367 KGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLRE 426
Query: 531 AYNLFRKI 538
A +LFR +
Sbjct: 427 AQDLFRNM 434
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 65/157 (41%), Gaps = 1/157 (0%)
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM-MYKKARKVGCKLSLTA 444
R + DAL F ML R +P L + G + ++ + K+ VG ++
Sbjct: 71 RNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYT 130
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
+ + + + + ++ + G + +I GLC +G+ AV + ++ +
Sbjct: 131 LSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMV 190
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
KG P Y+ + N L + +A L +K++ A
Sbjct: 191 AKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEA 227
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 195/430 (45%), Gaps = 39/430 (9%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET-LSIVMDS 207
FF WA K N D +Y +++ L + + M ++ +M + + T LS V+
Sbjct: 109 FFRWAAKRRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRM 168
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLF 265
A V KAI + +++ + A++ N ++ L G L+N M +G
Sbjct: 169 LGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFP 228
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS-------------------------- 299
+ MTY+ +IS + KLG+ ++L E+ G
Sbjct: 229 DTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLF 288
Query: 300 ---------PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
PD T++ LI GLG+AGRID+A F M+ +GC PDT N +I+
Sbjct: 289 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKA 348
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR-KVADALEVFEEMLDRGIVPSTGT 409
G D+ MK ++ M + C P++ TY +I L +S+ + ++ FE M + GI PS+ T
Sbjct: 349 GRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFT 408
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
+ ++ C AMM+ ++ + G AY L+ L + + +L+ E++
Sbjct: 409 YSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 468
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
E+ S +Y +I L G+L++A+ + +E + G P Y+ L + L + L+
Sbjct: 469 ENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLD 528
Query: 530 SAYNLFRKIK 539
A + R+++
Sbjct: 529 EALSTMRRMQ 538
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 190/414 (45%), Gaps = 5/414 (1%)
Query: 129 LDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSD 188
L V +++ + +A+ +F+ IK ++YN ++ L + + + ++
Sbjct: 162 LSEVVRMLGNAKMVSKAIAIFYQ--IKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNE 219
Query: 189 MAKEG-VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
M+ EG PD T S ++ +F + G+ A Q+L +++ G++ + +++ +
Sbjct: 220 MSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLD 279
Query: 248 HVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
V A SLF M+ + +V TY +I G K G++ E E+ EG PD++ +
Sbjct: 280 DVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMN 339
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN-YISVGDFDECMKYYKGMSS 365
+I LG+AGR+DDA+++F M C P YN +I + S E +++ M
Sbjct: 340 NMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKE 399
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
P+ TY+ LI G K+ ++ A+ + EEM ++G P S ++ L
Sbjct: 400 SGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDL 459
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A ++++ ++ S Y ++++ L G+ ++++ EM + G D Y +++
Sbjct: 460 ACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMS 519
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
GL G L+ A+ M G P Y+ + N L + A + +K
Sbjct: 520 GLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMK 573
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 150/336 (44%), Gaps = 2/336 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++H DV +Y +++ LG+ D + +M +EG PD ++ +++ +AG+
Sbjct: 291 MRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGR 350
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ-RLHVGAASSLFNSMK-GKVLFNVMTYN 271
+ A+++ + + N ++ L + + S F MK + + TY+
Sbjct: 351 LDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYS 410
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
I+I G+ K ++ + +L+E+ +GF P + LI+ LG+A R D A E+F +KE
Sbjct: 411 ILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKEN 470
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
Y +I + G D+ + + M+ C P++ Y L+SGL ++ + +A
Sbjct: 471 CGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEA 530
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
L M + G +P + L L G PH AM M ++ + + +Y +L
Sbjct: 531 LSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGA 590
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
LS G L EM G+ D Y ++ +
Sbjct: 591 LSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAI 626
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 117/276 (42%), Gaps = 37/276 (13%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT-FSFLIEGLGRAGRIDDAIEVFDT 327
TY +I + Q EM ++++E+V + T S ++ LG A + AI +F
Sbjct: 125 TYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQ 184
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY-NCEPNMDTYTRLISGLLKSR 386
+K + C P AYN++I + G + + + Y MS+ +C P+ TY+ LIS K
Sbjct: 185 IKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLG 244
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+ A ++ EM + G+ P+T T + H A+ ++++ R C+ + Y
Sbjct: 245 RRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYT 304
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+R GL G+++ A E R+
Sbjct: 305 ELIR-----------------------------------GLGKAGRIDEAYHFFYEMQRE 329
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
G P +V + + N L + +L+ A LF+++ R
Sbjct: 330 GCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLR 365
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 159/330 (48%), Gaps = 2/330 (0%)
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMT 269
+AG +A+ R+ED+G K D + +VV+ L ++ A S F+S+K + +V+
Sbjct: 158 KAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEPDVVV 217
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
Y ++ GW + G + E ERV E+ G P+ T+S +I+ L R+G+I A +VF M
Sbjct: 218 YTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMI 277
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
+ GC P+ +N ++ ++ G ++ ++ Y M C P+ TY LI + +
Sbjct: 278 DVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLE 337
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
+A+++ + +G + + + G ++A M+ K + + C+ + Y +L+
Sbjct: 338 EAVKILNS-VKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILM 396
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL-RKGF 508
R + M+L L EM E+ + Y +I+ C IG NA +E + K
Sbjct: 397 RMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCL 456
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
PS VY + +L + +L+ L K+
Sbjct: 457 RPSLPVYEMVLQQLRKAGQLKKHEELVEKM 486
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 172/354 (48%), Gaps = 24/354 (6%)
Query: 129 LDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRK-------FFDF 181
+D+ GK L+ EA V FN ++ D +++V++ +L +++ FFD
Sbjct: 153 IDLAGK----AGLAAEA-VHAFN-RMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDS 206
Query: 182 MCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLW 241
+ K+ PD+ + ++ + RAG + +A ++ G ++ G++ + + ++V+
Sbjct: 207 L--------KDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVID 258
Query: 242 CLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
LC+ + A +F+ M N +T+N ++ K G+ ++ +V ++ G P
Sbjct: 259 ALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPP 318
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
D++T++FLIE R +++A+++ +++K KGC + +++N + +GD + + +
Sbjct: 319 DAITYNFLIESHCRDDNLEEAVKILNSVK-KGCNLNASSFNPIFGCISKLGDVNSAHRMF 377
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
M C PN TY L+ + L++ +EM + I P+ T + C
Sbjct: 378 AKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGI 437
Query: 421 GPPHAAMMMYKKARKVGC-KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
G + A +K+ + C + SL Y+++L++L G+ +L +M G+
Sbjct: 438 GHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGF 491
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 131/267 (49%), Gaps = 4/267 (1%)
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
GN+S EA +F +K + +V +Y++++ AL R +V S+M G +P+
Sbjct: 229 GNIS-EAERVF--GEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNA 285
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
T + +M ++AG+ K +Q+ +++ G DA + N ++ C+ ++ A + NS
Sbjct: 286 ITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS 345
Query: 259 MKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+K N ++N + SKLG V R+ ++ P+++T++ L+
Sbjct: 346 VKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKST 405
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC-EPNMDTYTR 377
D +++ M E P+ N Y +IS + +G ++ ++K M C P++ Y
Sbjct: 406 DMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEM 465
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIV 404
++ L K+ ++ E+ E+M++RG V
Sbjct: 466 VLQQLRKAGQLKKHEELVEKMVNRGFV 492
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 121/250 (48%), Gaps = 18/250 (7%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
G SP+ + +I+ G+AG +A+ F+ M++ GC PD A++ VIS+ E
Sbjct: 143 GHSPEP--YMEMIDLAGKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEA 200
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
++ + EP++ YT L+ G ++ +++A VF EM GI P+ T + ++
Sbjct: 201 QSFFDSLKD-RFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDA 259
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
LC G A ++ + VGC + + L+R G+ +L ++++M+ G P D
Sbjct: 260 LCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPD 319
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKG-------FCPSRLVYSKLSNKLLASNKLE 529
Y ++I C LE AV ++ S++KG F P SKL + +
Sbjct: 320 AITYNFLIESHCRDDNLEEAVKIL-NSVKKGCNLNASSFNPIFGCISKLGD-------VN 371
Query: 530 SAYNLFRKIK 539
SA+ +F K+K
Sbjct: 372 SAHRMFAKMK 381
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 193/402 (48%), Gaps = 9/402 (2%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNV----LSDMAKEGVN--PD 197
EA LF ++ DV +Y ++K L + + L+D+++ +N P+
Sbjct: 157 EATRLFLR--MQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPN 214
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ T +I++D + G+ +A Q+ ++ G+ S N ++ C + L +
Sbjct: 215 VITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLD 274
Query: 258 SMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
M + L +++T+N++I K G+V+E +++L ++ G PD +T++ LIEG G
Sbjct: 275 EMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVG 334
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
++ A E+F +M KGC PD +YN +I+ Y +E MK Y M PN+ TY
Sbjct: 335 DLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYD 394
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
L+ G+ + KV DA ++F M GI ++ T FL+ LC AM ++ + +
Sbjct: 395 SLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSS 454
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
KL + L+ L GK +L+ ++ G+ + Y +I G C GQ++ A
Sbjct: 455 NFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKA 514
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+++++ G P + Y+ L SNKLE L ++
Sbjct: 515 NVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRM 556
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 164/335 (48%), Gaps = 3/335 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA LF +K + + SYN ++ ++ +L +M +G+ PD+ T ++
Sbjct: 233 EAKQLF--EEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNV 290
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
++D+ + G+V +A ++LG + + G+ D + N ++ C + +A LF SM K
Sbjct: 291 LIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKG 350
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+V++YN++I+G+SK +V E ++ E++ G P+ +T+ L++G+ AG++DDA
Sbjct: 351 CEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAK 410
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
++F MK G ++ Y + E MK + + S N + ++ LI GL
Sbjct: 411 KLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGL 470
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K+ K+ A E+FE++ + G P+ T T + C G A ++ +K GC +
Sbjct: 471 CKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDI 530
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
Y L+R K ++ L H M + D
Sbjct: 531 ITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDA 565
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 191/408 (46%), Gaps = 8/408 (1%)
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
GN++ + FF+ ++ + S+N ++ L + K + + ++ + M G++ D
Sbjct: 46 GNVTATHALHFFHLMMR-STPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDR 104
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
TL+I+++ ++ + + G + + N ++ LC + A+ LF
Sbjct: 105 CTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLR 164
Query: 259 M-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAE------GFSPDSLTFSFLIEG 311
M K +V+TY +I G G + ++ +E++ + P+ +T++ +++G
Sbjct: 165 MQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDG 224
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
L + GR D+A ++F+ MK +G P +YN++I + G ++E + M +P+
Sbjct: 225 LCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPD 284
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
M T+ LI L K KV +A ++ M++ GIVP T S +E C G ++A ++
Sbjct: 285 MVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFV 344
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
GC+ + +Y +L+ S K + L++EM G + Y+ ++ G+ G
Sbjct: 345 SMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAG 404
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++++A + G + Y + L ++ L A LF ++K
Sbjct: 405 KVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELK 452
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 180/389 (46%), Gaps = 1/389 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N +V +YN+IV L + D + +M +G+ P + + + ++ F AG+ ++
Sbjct: 210 NCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEES 269
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG 276
++L + D GL+ D + NV++ LC+ V A L M + ++ +++TYN +I G
Sbjct: 270 KRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEG 329
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ +G + + + ++G PD ++++ LI G + ++++A+++++ M G P+
Sbjct: 330 FCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPN 389
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y++++ G D+ K + M ++ N TY + GL K+ + +A+++F
Sbjct: 390 VITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFT 449
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
E+ + ++ LC G A +++K G + ++ Y +++ G
Sbjct: 450 ELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREG 509
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ L +M+ +G D Y ++ G +LE V ++ +K P + S
Sbjct: 510 QVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCS 569
Query: 517 KLSNKLLASNKLESAYNLFRKIKIARQND 545
+ + L K + +L + I + D
Sbjct: 570 IVVDMLSKDEKYQECLHLLPRFPIQKGVD 598
>gi|195655361|gb|ACG47148.1| ATP binding protein [Zea mays]
Length = 551
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 214/485 (44%), Gaps = 25/485 (5%)
Query: 83 VKRIDSSRAVDEFLLPEERLR--------GVFLQKLKGKGVIEDALWNVNVDLSLDVVGK 134
V+R+ S A+ L +ER V + E AL + +L+ +V
Sbjct: 54 VRRLSSEHAILPTHLQDERFATLSDRIYDAVIKTGTESNEGTEAALDALGAELTTPLVAD 113
Query: 135 VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKF----FDFMCNVLSDMA 190
V++R + FF WA + + + +YN I+ L ++ F +CNVL M
Sbjct: 114 VLHRLLYEEKLAFRFFAWASQQDGYSHEPTTYNDIIDILSGTRYKSRQFGVLCNVLDHMK 173
Query: 191 KEGVNP-DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHV 249
+ G +E L ++ ++ + R + ++LNV+L C+ V
Sbjct: 174 RHGSRSVPVEGLLEILRAYTEKHLTHMRKLAKKRRVRMRTPPETDALNVLLDAFCKCGMV 233
Query: 250 GAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A ++F +K K+L N TY+ + GW + + +VL+E++ +P+S T+ I
Sbjct: 234 KEAEAVFGRVKRKLLGNAETYSTLFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYVAAI 293
Query: 310 EGLGRAGRIDDAIEVFDTMKEKG---CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
E AG + +A E+F+ M+ +G P Y+ +I +EC + M +
Sbjct: 294 ESFCSAGLVSEARELFEFMRTEGLTVSSPTAKTYSIMIVALAKADRMEECFELLSDMRTC 353
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
C P++ TY LI G+ ++ A V +EM G P T FL LCS A
Sbjct: 354 GCMPDVTTYKDLIEGMCLVGRLDAAYRVLDEMGRAGFPPDIVTYNCFLNVLCSLRNADDA 413
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ + ++ + C+ S+ Y +L+ G+ LD+W EM + G + YE +I G
Sbjct: 414 LELCERMIEAHCEPSVHTYNMLMMMFFEMGEAHRALDIWLEMDKRGCQRAIDTYEIMIYG 473
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDY 546
L + G+ E A +++E + + +L Y K +L +L + NL I R +++
Sbjct: 474 LFDCGETEYATALLDEVINRDM---KLSYKKFDAIML---RLSAVGNLG---AIHRLSEH 524
Query: 547 ARRLW 551
R+ +
Sbjct: 525 MRKFY 529
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 177/381 (46%), Gaps = 6/381 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN ++ + ++ D G PD T ++D G+ +A+ +
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
G+K + N ++ L + + A+ L N M K L V T+NI+++G K+
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM 439
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G V + + ++K ++++G+ PD TF+ LI G ++++A+E+ D M + G PD Y
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N++++ F++ M+ YK M C PN+ T+ L+ L + RK+ +AL + EEM +
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKN 559
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK---ARKVGCKLSLTAYKLLLRRLSGFGK 457
+ + P T + ++ C G A +++K A KV S Y +++ +
Sbjct: 560 KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSS--STPTYNIIIHAFTEKLN 617
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
M L+ EM + DG Y ++ G C G + + E + GF PS +
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGR 677
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ N L +++ A + ++
Sbjct: 678 VINCLCVEDRVYEAAGIIHRM 698
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 172/374 (45%), Gaps = 1/374 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V SYN I+ L +FD V M G+ PD+ + +I M SF + + + A+++L
Sbjct: 111 VFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLN 170
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLG 281
+ G + + + V+ + LF M V + T+N ++ K G
Sbjct: 171 NMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKG 230
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
V E E++L +++ G P+ T++ I+GL + G +D A+ + + E+G PD YN
Sbjct: 231 DVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYN 290
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I F E Y M + EP+ TY LI+G K V A + + +
Sbjct: 291 NLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFN 350
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G VP T S ++ LC G + A+ ++ +A G K ++ Y L++ LS G
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L +EM E G + + + ++ GLC +G + +A +++ + KG+ P ++ L +
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 522 LLASNKLESAYNLF 535
K+E+A +
Sbjct: 471 YSTQLKMENALEIL 484
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 173/378 (45%), Gaps = 1/378 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++N +++ L ++ +L + K GV P+L T ++ + + G++ A++M+G L
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQV 283
+ G K D + N +++ LC+ A M + L + TYN +I+G+ K G V
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
ER++ + V GF PD T+ LI+GL G + A+ +F+ KG P+ YN +
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I + G E + MS P + T+ L++GL K V+DA + + M+ +G
Sbjct: 398 IKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P T + + A+ + G + Y LL L K +++
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME 517
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ M E G + + ++ LC +L+ A+ ++EE K P + + L +
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577
Query: 524 ASNKLESAYNLFRKIKIA 541
+ L+ AY LFRK++ A
Sbjct: 578 KNGDLDGAYTLFRKMEEA 595
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 122/306 (39%), Gaps = 40/306 (13%)
Query: 252 ASSLFNSMKGKVLF--NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL- 308
A +FNSM+ +V F + TY VI G+ ME VL ++ E L ++
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDM-RENVGNHMLEGVYVG 81
Query: 309 -IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY------- 360
++ GR G++ +A+ VF+ M C P +YNA++S + G FD+ K Y
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141
Query: 361 ----------------------------KGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
MSS CE N+ Y ++ G + A+
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
E+F +ML G+ T L LC G + K K G +L Y L ++ L
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G+ + + + E G D Y +I GLC + + A + + + + +G P
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 513 LVYSKL 518
Y+ L
Sbjct: 322 YTYNTL 327
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 5/238 (2%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK-GCGPDTNAYNAVISNYISVGDFDE 355
GF T+ +IE LG G+ + EV M+E G Y + NY G E
Sbjct: 35 GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQE 94
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+ ++ M Y+CEP + +Y ++S L+ S A +V+ M DRGI P + T ++
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL--SGFGKCGMLLDLWHEMQESGY 473
C PHAA+ + GC++++ AY ++ F G +L+ +M SG
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG--YELFGKMLASGV 212
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
+ ++ LC G ++ ++++ +++G P+ Y+ L +L+ A
Sbjct: 213 SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 112/251 (44%), Gaps = 37/251 (14%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V DV +YN ++ L + F+ + M ++G P+L T +I+++S R ++ +A+
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG--KVLFNVMTYNIVISG 276
+L +++ + DA + ++ C+ + A +LF M+ KV + TYNI+I
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHA 611
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+++ V E++ +E+V PD T+ +++G + G ++ + M E G
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENG---- 667
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+I P++ T R+I+ L +V +A +
Sbjct: 668 ----------FI---------------------PSLTTLGRVINCLCVEDRVYEAAGIIH 696
Query: 397 EMLDRGIVPST 407
M+ +G+VP
Sbjct: 697 RMVQKGLVPEA 707
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 8/159 (5%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L+++K K V DA V +D K G+L G A LF + V+ +
Sbjct: 553 LLEEMKNKSVNPDA---VTFGTLIDGFCK---NGDLDG-AYTLFRKMEEAY-KVSSSTPT 604
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN+I+ A + + +M + PD T +++D F + G V + L +
Sbjct: 605 YNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMM 664
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL 264
+ G +L V+ CLC V A+ + + M K L
Sbjct: 665 ENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGL 703
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 170/349 (48%), Gaps = 7/349 (2%)
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAAS 253
+ P+L ++DS + G + K ++ ++ G+ D + + ++ +C A
Sbjct: 234 IKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAK 293
Query: 254 SLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
LFN M + V NV+T+N++I K G++ E +LK ++ G SPD+ T++ LI+G
Sbjct: 294 GLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGF 353
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
GRIDDA ++F +M+ KG D +YN +I+ Y G E K Y+ M P +
Sbjct: 354 CLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTV 413
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
TY L++GL + KV DA +F EM + P + T L+ LC AM ++
Sbjct: 414 ITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHY 473
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+ S+ + L+ L K + +L++ + G + Y +I GLC GQ
Sbjct: 474 LENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQ 533
Query: 493 LENA---VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
LENA L MEE KG P+ + ++ L +++++ L +++
Sbjct: 534 LENAKDLFLGMEE---KGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEM 579
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 170/332 (51%), Gaps = 1/332 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K ++ DV +Y+ I+ + ++ + ++M EGV+P++ T ++++D+ +AG+
Sbjct: 264 MKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGK 323
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
+ +A +L + G D + N ++ C + A LF SM+ K + + ++YN+
Sbjct: 324 MEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNV 383
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I+G+ K G++VE +++ +E++ + P +T++ L+ GL R G++ DA +F MK
Sbjct: 384 LINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHD 443
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P++ YN ++ E M+ + + +++ +P++ + LI GL K+RK+ A
Sbjct: 444 LTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIAR 503
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
E+F + G+ P+ T T + LC G A ++ + GC +L + L+R
Sbjct: 504 ELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGF 563
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
+ +++L EM E + D V+
Sbjct: 564 CQNDEMQKVVELLQEMAEKDFSPDASTISIVV 595
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 186/438 (42%), Gaps = 60/438 (13%)
Query: 125 VDLSLDVVGKVVNRGNLSG--------------EAMVLFFNWAIKHPNVAKDVKSYNVIV 170
+ L+ D V +RG L EA +F + P + S+N ++
Sbjct: 42 ISLTKDTVSNAPDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQP--TPPISSFNTLL 99
Query: 171 KALGR-RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGL 229
A+ + +++FD + ++ M+ G+ PD TL+I+++ + +V + +LG + G
Sbjct: 100 GAVAKIKRYFDVI-SLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGH 158
Query: 230 KFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMER 288
+ + ++ LC + A+ L M + NV+TY +++G G + +
Sbjct: 159 SPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVK 218
Query: 289 VLKEIV--AEGFS----PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ +E++ GF P+ + + +I+ L + G ID E+F MK +G PD AY++
Sbjct: 219 LHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSS 278
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I G ++ + M PN+ T+ LI L K+ K+ +A + + M+ RG
Sbjct: 279 IIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRG 338
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P T T + ++ C G AR
Sbjct: 339 ESPDTFTYNTLIDGFCLEG-------RIDDAR---------------------------- 363
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
DL+ M+ G +D Y +I G C G++ A + E + K P+ + Y+ L L
Sbjct: 364 DLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGL 423
Query: 523 LASNKLESAYNLFRKIKI 540
K+ A+NLF ++K+
Sbjct: 424 FREGKVRDAWNLFGEMKV 441
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 97/201 (48%), Gaps = 10/201 (4%)
Query: 133 GKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKE 192
GKV + NL GE +K ++ + +YN+++ L + + +
Sbjct: 427 GKVRDAWNLFGE---------MKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENH 477
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
P ++ + ++D +A ++ A ++ RL GL+ + + V++ LC+ + A
Sbjct: 478 DFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENA 537
Query: 253 SSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
LF M+ K N++T+N ++ G+ + ++ ++ +L+E+ + FSPD+ T S +++
Sbjct: 538 KDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDL 597
Query: 312 LGRAGRIDDAIEVFDTMKEKG 332
L + + + + + T +G
Sbjct: 598 LSKDEKYREYLHLLPTFPAQG 618
>gi|224107985|ref|XP_002314678.1| predicted protein [Populus trichocarpa]
gi|222863718|gb|EEF00849.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 197/434 (45%), Gaps = 8/434 (1%)
Query: 100 ERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLF--FNWAIKHP 157
++L + ++ + + AL +D + ++V +++ R +V F F WA
Sbjct: 59 DKLSEILKKRYSSEAAVVKALNESGIDATNELVSQILMR--FDSHCVVAFGVFIWAKNQT 116
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNP--DLETLSIVMDSFIRAGQVY 215
+ + Y+ ++ LG+ K F M +++ M +G+N L T S VM +A +
Sbjct: 117 SYVHTPELYDYMIDILGKFKKFSLMWSLVEQM--KGLNGYVSLATASKVMRRLAKARKYK 174
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVIS 275
AI + +E +G D E+LNV++ L + V A S F K + + ++NI+I
Sbjct: 175 DAIDVFRGIEKYGASKDREALNVLMDALVKEGDVEDAHSAFLEFKDCITLDSSSFNILIH 234
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G+ K V ++++E+ GF PD +++S I + VFD M+EKGC P
Sbjct: 235 GYCKARMFVVARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKGCKP 294
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+ Y V+ +E ++ Y+ M C P+ Y+ LI L +S ++ DA +VF
Sbjct: 295 NVITYTTVMHALGKARQLNEALEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRIKDAWDVF 354
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
E+M +G+ + + + C++ +A+ + ++ CK + Y LL+
Sbjct: 355 EDMEKQGVCRNLWVYNTMISSACAHSQGGSALKLLERMEGDSCKPDVKTYAPLLKMCCRR 414
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
+L L M ++ D Y ++ C G+LE+A +E++ KG P +
Sbjct: 415 KSIKLLKFLLSHMFKNNVSVDLGTYTLLVNEFCRNGKLEHACFYFQEAVLKGMVPMVKTF 474
Query: 516 SKLSNKLLASNKLE 529
L +L N E
Sbjct: 475 KALVEELEQKNMKE 488
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 112/237 (47%), Gaps = 3/237 (1%)
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T S ++ L +A + DAI+VF +++ G D A N ++ + GD ++ + +
Sbjct: 159 TASKVMRRLAKARKYKDAIDVFRGIEKYGASKDREALNVLMDALVKEGDVEDAHSAF--L 216
Query: 364 SSYNC-EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
+C + ++ LI G K+R A ++ EEM G P + + F+ C
Sbjct: 217 EFKDCITLDSSSFNILIHGYCKARMFVVARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKD 276
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
++ + ++ GCK ++ Y ++ L + L+++ +M+ +G D + Y
Sbjct: 277 FRNVEAVFDEMQEKGCKPNVITYTTVMHALGKARQLNEALEVYEKMKRNGCLPDSKFYSS 336
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I L G++++A V E+ ++G C + VY+ + + A ++ SA L +++
Sbjct: 337 LIYVLSQSGRIKDAWDVFEDMEKQGVCRNLWVYNTMISSACAHSQGGSALKLLERME 393
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 189/381 (49%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
VA +V +YN++V+AL R ++L DM G P++ T + ++ +F RAG+V A
Sbjct: 186 VAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAE 245
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+++G + + GLK + + N ++ +C+ + A +F+ M + + + ++YN ++ G+
Sbjct: 246 RLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGY 305
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G E V E+ +G PD +TF+ LI + +AG ++ A+ + M+E+G +
Sbjct: 306 CKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNE 365
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+ A+I + G D+ + +GM +P++ Y LI+G ++ +A E+ E
Sbjct: 366 VTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHE 425
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M +G+ P T ++ + C H+A + ++ + G Y L+R L G +
Sbjct: 426 MEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKR 485
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L+ M + G D Y +I G C G +E+A+ + ++ ++ G P + YS
Sbjct: 486 LSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSV 545
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L N L S + A L K+
Sbjct: 546 LINGLSKSARAMEAQQLLFKL 566
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 159/320 (49%), Gaps = 2/320 (0%)
Query: 228 GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEM 286
G+ + + N+++ LC R H A S+ M+G NV+TYN +++ + + G+V
Sbjct: 185 GVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGA 244
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
ER++ + G P+ +TF+ ++ G+ +AG+++DA +VFD M +G PD +YN ++
Sbjct: 245 ERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGG 304
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
Y G E + + M+ P++ T+T LI + K+ + A+ + +M +RG+ +
Sbjct: 305 YCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMN 364
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
T T+ ++ C G A++ + ++ K S+ Y L+ G+ +L H
Sbjct: 365 EVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLH 424
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
EM+ G D Y +I+ C +A + ++ L KG P + YS L L
Sbjct: 425 EMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEK 484
Query: 527 KLESAYNLFRK-IKIARQND 545
+L A+ LF+ IK+ Q D
Sbjct: 485 RLSDAHVLFKNMIKLGLQPD 504
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 130/274 (47%), Gaps = 1/274 (0%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V+ YN V+ S + R ++++G +P+ T++ L+ L G +A+ +
Sbjct: 155 SVLAYNAVLLALSD-ASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSIL 213
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
M+ GCGP+ YN +++ + G+ D + M +PN+ T+ +++G+ K+
Sbjct: 214 RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKA 273
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
K+ DA +VF+EM+ G+ P + + + C G H A+ ++ + + G + +
Sbjct: 274 GKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTF 333
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ + G + L +M+E G + + +I G C G L++A+L + +
Sbjct: 334 TSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQ 393
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
PS + Y+ L N +++ A L +++
Sbjct: 394 CRIKPSVVCYNALINGYCMVGRMDEARELLHEME 427
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 140/336 (41%), Gaps = 16/336 (4%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+K + V YN ++ D +L +M +G+ PD+ T S ++ ++ +
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 449
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYN 271
+ A ++ ++ + G+ DA + + ++ LC + A LF +M K + + TY
Sbjct: 450 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYT 509
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I G K G V + ++V G PD +T+S LI GL ++ R +A ++ + +
Sbjct: 510 SLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHE 569
Query: 332 GCGPDTNAYN---------------AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
P Y+ A++ + G +E K Y+ M N + Y+
Sbjct: 570 DPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYS 629
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
LI G ++ V AL ++ML G P++ + S + L G A + ++
Sbjct: 630 VLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNY 689
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
A K L+ G +LD+ H M + G
Sbjct: 690 CSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDG 725
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 125/273 (45%), Gaps = 25/273 (9%)
Query: 108 QKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYN 167
Q++ KGV+ DA+ ++ + + LS +A VLF N IK + D +Y
Sbjct: 459 QQMLEKGVLPDAITYSSL------IRVLCGEKRLS-DAHVLFKNM-IKL-GLQPDEFTYT 509
Query: 168 VIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL--E 225
++ + + ++ M K GV PD+ T S++++ ++ + +A Q+L +L E
Sbjct: 510 SLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHE 569
Query: 226 D---FGLKFDA----------ESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYN 271
D K+DA +S+ +L C + + A ++ SM + + Y+
Sbjct: 570 DPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYS 629
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
++I G + G V++ K+++ GF+P+S + LI GL G + +A +V +
Sbjct: 630 VLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNY 689
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
D A A+I ++ G+ D + GM+
Sbjct: 690 CSLADAEASKALIDLNLNEGNVDAVLDVLHGMA 722
>gi|449435037|ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 198/418 (47%), Gaps = 6/418 (1%)
Query: 113 KGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKA 172
+ +++D + N ++ LS D+V K++ R ++ + F WA Y++++
Sbjct: 89 QSLLQDPVCN-SIQLSHDLVYKLLQRFKDDWKSALGVFRWAESLSGFKHTPDLYDILIDT 147
Query: 173 LGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
LG+ K M +L +M KE L+T++ M F AGQ A+++ LE +GL+ +
Sbjct: 148 LGKTKQLVKMRGMLEEM-KEARLVTLDTVAKAMRRFAGAGQWENAVRIFDDLETYGLEKN 206
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
ES+NV+L LC+ V A ++ +K + N T+N+ I GW K+ ++ E L+E
Sbjct: 207 TESMNVLLDTLCKEKKVEKARQMYLELKSHIAPNANTFNMFIHGWCKVNKIDEAHWTLEE 266
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+ G P +++S +I + E+ D M +GC + Y ++ + +
Sbjct: 267 MKGYGHRPCVISYSTIILFYCHRCNFNKVYELLDEMDAQGCPANVITYTTIMCSLTKSEE 326
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE-EMLDRGIVPSTGTIT 411
F+E ++ + M S EP+ Y LI L ++ KV +A+ VFE EM + ++P+T T
Sbjct: 327 FEEALQIAERMKSAGYEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYN 386
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKV-GCKLSLTAYKLLLRRLSGFGKCGM-LLDLWHEMQ 469
S + C AM + ++ +K CK + Y LL+ GK L +L EM
Sbjct: 387 SMIAMYCRRAREEKAMKLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNLLDEMI 446
Query: 470 ESGYPS-DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
+ S D Y +I GLC + + A + E+ + + P L L ++ N
Sbjct: 447 NKHHLSLDISTYSLLIHGLCRANKCDWAYQLFEKMISQDIKPRYLTCQLLLDEFKQKN 504
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 178/391 (45%), Gaps = 36/391 (9%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
++ M + G P+ T V+ ++GQ A+++L ++E+ +K DA ++++ LC
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 245 QRLHVGAASSLFNSM------------------------------------KGKVLFNVM 268
+ + A +LFN M K K+ +V+
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
++ +I + K G++ E E + KE++ G SPD++T++ LI+G + ++D A + D M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
KGCGP+ +N +I+ Y D+ ++ ++ MS + TY LI G + K+
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A E+F+EM+ R + P + L+ LC G P A+ +++K K +L + Y ++
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ + K DL+ + G D + Y +I GLC G L A L+ + G
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P+ Y+ L L + L +IK
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 190/398 (47%), Gaps = 7/398 (1%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+VL ++ +A ++ + ++++ R + + + + K G PD T S ++
Sbjct: 90 LVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLI 149
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVL 264
+ G+V +A++++ R+ + G K +LN ++ LC V A L + M +
Sbjct: 150 NGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ 209
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
N +TY V+ K GQ +L+++ D++ +S +I+GL + G +D+A +
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNL 269
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F+ M+ KG D Y +I + G +D+ K + M P++ ++ LI +K
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
K+ +A E+ +EM+ RGI P T T TS ++ C A M GC ++
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389
Query: 445 YKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ +L ++G+ K ++ L+L+ +M G +D Y +I G C +G+LE A + +
Sbjct: 390 FNIL---INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
E + + P + Y L + L + + E A +F KI+
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE 484
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 168/378 (44%), Gaps = 3/378 (0%)
Query: 132 VGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAK 191
V KV+ + + AM L ++ + D Y++I+ L + D N+ ++M
Sbjct: 218 VLKVMCKSGQTALAMELL--RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
+G D+ + ++ F AG+ ++L + + D + + ++ C + +
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 252 ASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A L M + + + +TY +I G+ K Q+ + +L +V++G P+ TF+ LI
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
G +A IDD +E+F M +G DT YN +I + +G + + ++ M S P
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
++ +Y L+ GL + + ALE+FE++ + G + +C+ A ++
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
G K + Y +++ L G L+ +M+E G+ +G Y +I
Sbjct: 516 CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575
Query: 491 GQLENAVLVMEESLRKGF 508
G + ++EE R GF
Sbjct: 576 GDATKSAKLIEEIKRCGF 593
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 145/323 (44%), Gaps = 33/323 (10%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
+ NL + + LF +++ V D +YN +++ + + +M V PD
Sbjct: 399 KANLIDDGLELFRKMSLR--GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ + I++D G+ KA+++ ++E ++ D N+++ +C V A LF
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 516
Query: 258 SMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF--------- 307
S+ K V +V TYNI+I G K G + E + + +++ +G SP+ T++
Sbjct: 517 SLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEG 576
Query: 308 -------LIEGLGRAGRIDD------AIEVFDTMKEKGCGPDTNAYNAVISNYI-----S 349
LIE + R G D A+ M + G PD + ++ + S
Sbjct: 577 DATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENAS 636
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
V D +K M + +PN+ TY +I GLL ++ V ++M +RG P+ T
Sbjct: 637 VYDAP---TLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVT 693
Query: 410 ITSFLEPLCSYGPPHAAMMMYKK 432
++F+ LC +A+++ +K
Sbjct: 694 KSTFISGLCKQDLHGSAILLLRK 716
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 157/366 (42%), Gaps = 9/366 (2%)
Query: 180 DFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVV 239
D ++ +M + P L S + R Q + + ++E G+ + +L+++
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 240 LWCLCQRLHVGAASSLFNSMKGKVL-----FNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
+ C C+ + A F++M GK++ + +T++ +I+G G+V E ++ +V
Sbjct: 114 INCCCRCRKLSLA---FSAM-GKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
G P +T + L+ GL G++ DA+ + D M E G P+ Y V+ G
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
M+ + M + + Y+ +I GL K + +A +F EM +G T+ +
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
C G + + K + A+ L+ GK +L EM + G
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
D Y +I G C QL+ A +++ + KG P+ ++ L N +N ++ L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 535 FRKIKI 540
FRK+ +
Sbjct: 410 FRKMSL 415
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 147/344 (42%), Gaps = 16/344 (4%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+++++N+++ + D + M+ GV D T + ++ F G++ A ++
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ ++ D S ++L LC A +F + K K+ ++ YNI+I G
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 505
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+V + + + +G PD T++ +I GL + G + +A +F M+E G P+ Y
Sbjct: 506 SKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTY 565
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I ++ GD + K + + C ++D T + AL ML
Sbjct: 566 NILIRAHLGEGDATKSAKLIEEIK--RCGFSVDAST-----------LRFALSTLARMLK 612
Query: 401 RGIVPSTGTITSFLEPLC--SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
G P T T+ L P C + A ++K + +G K ++ Y +++ L
Sbjct: 613 AGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMI 672
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
+ + +M E G + I+GLC +A+L++ +
Sbjct: 673 SQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRK 716
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 194/410 (47%), Gaps = 13/410 (3%)
Query: 135 VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
+++R +L + + F I + V ++ +++ L ++ + +E +
Sbjct: 119 LMHRTDLGFSVLAIHFKKGIPYNEV-----TFTTLIRGLFAENKVKDAVHLFKKLVRENI 173
Query: 195 -NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAAS 253
PD VMD + G KA +L +E K D N+V+ C+ + A+
Sbjct: 174 CEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGAT 233
Query: 254 SLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
SL N MK K + +++TY +I G KL Q ++ + E++ PD TF+ +I+GL
Sbjct: 234 SLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGL 293
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
+ G+++DA E+ M EKG P+ YN V+ Y G + + M EP++
Sbjct: 294 CKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDI 353
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
+YT LI+G ++ +K+ A+++F E+ G+ PS T + L L G A + + +
Sbjct: 354 ISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDE 413
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ G +L + LL G+ K G++ + +H+++ ++ +IY VI GLC
Sbjct: 414 MQAAGHIPNLYTHCTLL---GGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCK 470
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G+L+ A E+ G P + Y+ + + L+ A ++ RK++
Sbjct: 471 NGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKME 520
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 153/331 (46%), Gaps = 9/331 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D YN+++ A + D ++L++M ++ + PD+ T + ++D + Q K +
Sbjct: 212 DTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLF 271
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ + D + N V+ LC+ V A + M K V N +TYN+V+ G+
Sbjct: 272 LEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLR 331
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
GQ+ R+ ++ +G PD ++++ LI G ++D A+++F + + G P
Sbjct: 332 GQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTC 391
Query: 341 NAVISNYISVGDFDECMK-YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
+ ++ VG EC K ++ M + PN+ T+ L+ G K+ V +A+ F ++
Sbjct: 392 SVLLRGLFEVGR-TECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLE 450
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
R + T+ + LC G A ++K +G + Y + +SG+ + G
Sbjct: 451 RRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAM---ISGYCQEG 507
Query: 460 ML---LDLWHEMQESGYPSDGEIYEYVIAGL 487
+L D+ +M+++G D Y ++ G
Sbjct: 508 LLDEAKDMLRKMEDNGCLPDNRTYNVIVRGF 538
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 168/383 (43%), Gaps = 4/383 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S++ ++KAL K + + ++ ++ K + D LS V++S + +L
Sbjct: 74 SFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTVVNSCCLMHRTDLGFSVLAIH 133
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--NVMTYNIVISGWSKLGQ 282
G+ ++ + ++ L V A LF + + + + + Y V+ G K G
Sbjct: 134 FKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGH 193
Query: 283 VVEMERVLKEIVAEGFS-PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ +L+ ++ +G + PD+ ++ +I+ + G +D A + + MK+K PD Y
Sbjct: 194 TQKAFDLLR-LMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYT 252
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++I + +++ + M N P++ T+ +I GL K KV DA E+ M+++
Sbjct: 253 SLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEK 312
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G+ P+ T ++ C G A ++ G + + +Y L+ K
Sbjct: 313 GVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKA 372
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+ L+ E+ ++G ++ GL +G+ E A + +E G P+ + L
Sbjct: 373 MQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGG 432
Query: 522 LLASNKLESAYNLFRKIKIARQN 544
+ +E A + F K++ R++
Sbjct: 433 YFKNGLVEEAMSHFHKLERRRED 455
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 117/259 (45%), Gaps = 15/259 (5%)
Query: 165 SYNVIVKA------LGR-RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+YNV++ +GR R+ FD M +G+ PD+ + + +++ ++ ++ KA
Sbjct: 320 TYNVVMDGYCLRGQMGRARRIFD-------SMIDKGIEPDIISYTALINGYVEKKKMDKA 372
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
+Q+ + GLK + +V+L L + A F+ M+ + N+ T+ ++ G
Sbjct: 373 MQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGG 432
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K G V E ++ + ++ +I GL + G++D A F+ + G PD
Sbjct: 433 YFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPD 492
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y A+IS Y G DE + M C P+ TY ++ G +S KV++ +
Sbjct: 493 VITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLK 552
Query: 397 EMLDRGIVPSTGTITSFLE 415
E+ + T+ ++
Sbjct: 553 EIAGKSFSFEAATVELLMD 571
>gi|357138018|ref|XP_003570595.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Brachypodium distachyon]
Length = 548
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 205/449 (45%), Gaps = 29/449 (6%)
Query: 117 EDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRR 176
E AL + +L+ +V V++R + FF WA + N D +YN ++ L
Sbjct: 93 EAALDALGAELTTPLVSDVMHRLRYEEKLAFRFFAWASQQDNYEHDQAAYNEVIDTLSGT 152
Query: 177 KF----FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA-----IQMLGRLEDF 227
++ F +C+VL M + T S+ ++ + + Y ++ L +
Sbjct: 153 RYKARQFGVLCDVLDHMKRH------RTRSVPVEDLLAILRAYTEKHLTNLRKLAKKRRV 206
Query: 228 GLKFDAES--LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE 285
++ E+ LN++L C+ V A ++F +K K+ N TYNI+ GW + +
Sbjct: 207 RMRTPPETDALNILLDAFCKCGMVREAETVFGRVKRKLQGNAETYNILFFGWCRARDPKK 266
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG---PDTNAYNA 342
+VL+E++ +P+S T+ I+ AG + +A E+F+ M+ +G P AY+
Sbjct: 267 AMKVLEEMILMKHAPESFTYIAAIDSFCSAGLVSEAKELFEFMRTEGSSISSPTAKAYSV 326
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I + D+C + M C P++ T+ LI G+ K+ A V EEM G
Sbjct: 327 MIVALVKADRMDDCFELISDMIKLGCMPDVSTFKDLIEGMCLVDKIDTAYFVLEEMGKAG 386
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P T FLE LC+ A+ + ++ + C+ S+ Y +L+ + L
Sbjct: 387 FPPDIVTYNCFLEVLCNLQKADDALKLCERMIEAHCEPSVHTYNMLMVMFFQMREPHRAL 446
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
D+W EM + G + YE +I GL + G+ E+A +++E + +L Y K +
Sbjct: 447 DIWLEMDKRGCRRAVDTYEIMIDGLFDCGRTEDATNLLDEVINHDM---KLSYKKFDAIM 503
Query: 523 LASNKLESAYNLFRKIKIARQNDYARRLW 551
L +L + NL I R +++ R+ +
Sbjct: 504 L---QLSAVGNLG---AIHRLSEHMRKFY 526
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 178/391 (45%), Gaps = 36/391 (9%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
++ M + G P+ T V+ ++GQ A+++L ++E+ +K DA ++++ LC
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 245 QRLHVGAASSLFNSM------------------------------------KGKVLFNVM 268
+ + A +LFN M K K+ +V+
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
++ +I + K G++ E E + KE++ G SPD++T++ LI+G + ++D A + D M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
KGCGP+ +N +I+ Y D+ ++ ++ MS + TY LI G + K+
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A E+F+EM+ R + P + L+ LC G P A+ +++K K +L + Y ++
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ + K DL+ + G D + Y +I GLC G L A L+ + G
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P+ Y+ L L + L +IK
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 190/398 (47%), Gaps = 7/398 (1%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+VL ++ +A ++ + ++++ R + + + + K G PD T S ++
Sbjct: 90 LVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLI 149
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVL 264
+ G+V +A++++ R+ + G K +LN ++ LC V A L + M +
Sbjct: 150 NGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ 209
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
N +TY V+ K GQ +L+++ D++ +S +I+GL + G +D+A +
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNL 269
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F+ M+ KG D Y +I + G +D+ K + M P++ ++ LI +K
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
K+ +A E+ +EM+ RGI P T T TS ++ C A M GC ++
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389
Query: 445 YKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ +L ++G+ K ++ L+L+ +M G +D Y +I G C +G+LE A + +
Sbjct: 390 FNIL---INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
E + + P + Y L + L + + E A +F KI+
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE 484
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 162/340 (47%), Gaps = 2/340 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ Y +++ +D +L DM K + PD+ S ++D F++ G++ +A ++
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
+ G+ D + ++ C+ + A+ + + M K N+ T+NI+I+G+ K
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ + + +++ G D++T++ LI+G G+++ A E+F M + PD +Y
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++ G+ ++ ++ ++ + E ++ Y +I G+ + KV DA ++F +
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G+ P T + LC G A ++++K + G + Y +L+R G G
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATK 580
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
L E++ G+ D + V+ L + G+L+ + L M
Sbjct: 581 SAKLIEEIKRCGFSVDASTVKMVVDMLSD-GRLKKSFLDM 619
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 168/378 (44%), Gaps = 3/378 (0%)
Query: 132 VGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAK 191
V KV+ + + AM L ++ + D Y++I+ L + D N+ ++M
Sbjct: 218 VLKVMCKSGQTALAMELL--RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
+G D+ + ++ F AG+ ++L + + D + + ++ C + +
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 252 ASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A L M + + + +TY +I G+ K Q+ + +L +V++G P+ TF+ LI
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
G +A IDD +E+F M +G DT YN +I + +G + + ++ M S P
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
++ +Y L+ GL + + ALE+FE++ + G + +C+ A ++
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
G K + Y +++ L G L+ +M+E G+ +G Y +I
Sbjct: 516 CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575
Query: 491 GQLENAVLVMEESLRKGF 508
G + ++EE R GF
Sbjct: 576 GDATKSAKLIEEIKRCGF 593
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 156/362 (43%), Gaps = 9/362 (2%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
++ +M + P L S + R Q + + ++E G+ + +L++++ C
Sbjct: 58 DLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCC 117
Query: 244 CQRLHVGAASSLFNSMKGKVLF-----NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
C+ + A F++M GK++ + +T++ +I+G G+V E ++ +V G
Sbjct: 118 CRCRKLSLA---FSAM-GKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
P +T + L+ GL G++ DA+ + D M E G P+ Y V+ G M+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
+ M + + Y+ +I GL K + +A +F EM +G T+ + C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
G + + K + A+ L+ GK +L EM + G D
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y +I G C QL+ A +++ + KG P+ ++ L N +N ++ LFRK+
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 539 KI 540
+
Sbjct: 414 SL 415
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 98/222 (44%)
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
DDA+++F M P ++ + S +D + K M N+ T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I+ + RK++ A +++ G P T T ++ + LC G A+ + + ++G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
K +L L+ L GK + L M E+G+ + Y V+ +C GQ A+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
++ + + + YS + + L L++A+NLF +++I
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 196/398 (49%), Gaps = 13/398 (3%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K + DV SY ++ ++ + ++M G+ PD+ T S+++D + G+
Sbjct: 484 MKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGK 543
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
V +A ++L + G D + ++ LC + + A+ LF M K + NV+T
Sbjct: 544 VIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCAT 603
Query: 273 VISGWSKLGQV---VEMER-VLKEIVAEGFS--PDSLTFSFLIEGLGRAGRIDDAIEVFD 326
++ G + G + +E+ + +L + G + P+++++S +I+GL + GR D+A E+F
Sbjct: 604 LMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFK 663
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
MK G PD +Y ++I + G + + + M +P++ T++ LI L K
Sbjct: 664 EMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEG 723
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
KV +A E+ E M+ RG +P+T T T+ ++ LC A ++ K +K+GC + Y
Sbjct: 724 KVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYG 783
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQE------SGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
L++ L G L+L +M + + D Y +I GLC G+ + A +
Sbjct: 784 TLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELF 843
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+E G P+ + Y+ L + S KLE A +LF ++
Sbjct: 844 KEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEM 881
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 172/352 (48%), Gaps = 19/352 (5%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ-- 219
DV + +VK L + + M K G P++ T + +M ++G + A++
Sbjct: 562 DVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELH 621
Query: 220 --MLGRLEDFGL--KFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVI 274
ML +G+ K +A S ++++ LC+ A LF MK V+ +V++Y +I
Sbjct: 622 KNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLI 681
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ + G+ + + + E+V G PD TFS LI+ L + G++ +A E+ + M ++GC
Sbjct: 682 HGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCI 741
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+T Y ++ E + + M C P++ TY L+ GL ++ + ALE+
Sbjct: 742 PNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALEL 801
Query: 395 FEEML-DRG-----IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
++ML D G P + + ++ LC +G A ++K+ + +G ++ +Y L
Sbjct: 802 HKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSL 861
Query: 449 LRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
+ GF + G L D L++EM + G + Y +I G C GQ++ A+
Sbjct: 862 IH---GFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 196/423 (46%), Gaps = 23/423 (5%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNV----LSDMAKEGVN---P 196
EA LF ++K D +Y ++K L + + ++ L+D ++ G+ P
Sbjct: 288 EATQLFM--SMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRP 345
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
D+ T S+++D + G+V +A ++L + G D + + ++ LC + A+ LF
Sbjct: 346 DVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLF 405
Query: 257 NSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG------FSPDSLTFSFLI 309
SM K + +TY ++ G + G + ++ +E++ + P +++S +I
Sbjct: 406 MSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIII 465
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
+GL + R D+A E+F+ MK +G PD +Y +I + G +++ + M +
Sbjct: 466 DGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQ 525
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P++ T + LI L K KV +A ++ E ++ RG + T T+ ++ LC A +
Sbjct: 526 PDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQL 585
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP------SDGEIYEYV 483
+ K +K+GC ++ L++ L G + L+L M P + Y +
Sbjct: 586 FLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSII 645
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK-IKIAR 542
I GLC G+ + A + +E G P + Y+ L + S K + A LF + + I
Sbjct: 646 IDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGV 705
Query: 543 QND 545
Q D
Sbjct: 706 QPD 708
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 188/434 (43%), Gaps = 49/434 (11%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K + DV SY ++ ++ + ++M G+ PD+ T +++D F + G+
Sbjct: 191 MKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGK 250
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK------------- 260
V +A ++L + G D + + ++ LC + + A+ LF SMK
Sbjct: 251 VIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGT 310
Query: 261 --------GKVLF----------------------NVMTYNIVISGWSKLGQVVEMERVL 290
GK+ +V T +++I K G+V+E +L
Sbjct: 311 LMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELL 370
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
+ ++ G D +T+S LI+GL RI +A +F +M++ GC PD Y ++
Sbjct: 371 EVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQT 430
Query: 351 GDFDECMKYYK------GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
G+ + ++ ++ G C+P + +Y+ +I GL K R+ +A E+FEEM +GI+
Sbjct: 431 GNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIM 490
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P + T+ + C G A ++ + VG + +T +L+ L GK L
Sbjct: 491 PDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKL 550
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+ + G D ++ GLC ++ A + + + G P+ + + L L
Sbjct: 551 LEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQ 610
Query: 525 SNKLESAYNLFRKI 538
S ++ A L + +
Sbjct: 611 SGNIKIALELHKNM 624
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 170/387 (43%), Gaps = 47/387 (12%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SY++I+ L + + D + +M +G+ PD+ + + ++ F +G+ KA + +
Sbjct: 167 SYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEM 226
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVV 284
D G++ D V T ++I + K G+V+
Sbjct: 227 LDVGIQPD----------------------------------VTTSGVLIDMFCKEGKVI 252
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E +L+ +V G D +T+S LI+GL RI +A ++F +MK+ GC PD AY ++
Sbjct: 253 EANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLM 312
Query: 345 SNYISVGDFDECMKYYKGM----SSYNCE---PNMDTYTRLISGLLKSRKVADALEVFEE 397
G + + ++ M S Y + P++ T + LI L K KV +A E+ E
Sbjct: 313 KGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEV 372
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ RG + T ++ ++ LC A ++ +K+GC+ Y L++ L G
Sbjct: 373 MIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGN 432
Query: 458 CGMLLDLWHEMQES----GYPSDGEI--YEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
+ L L EM G + Y +I GLC + + A + EE +G P
Sbjct: 433 INIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPD 492
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y+ L + S K E A LF ++
Sbjct: 493 VISYTTLIHGFCLSGKWEKAKCLFNEM 519
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 182/394 (46%), Gaps = 19/394 (4%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ-- 219
D+ +Y+ ++K L + M K G PD T +M + G + A+Q
Sbjct: 381 DIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLH 440
Query: 220 --MLGRLEDFGLKFDAE--SLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
ML +G+K S ++++ LC+ A LF MK + ++ +V++Y +I
Sbjct: 441 QEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLI 500
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ G+ + + + E++ G PD T S LI+ L + G++ +A ++ + + ++GC
Sbjct: 501 HGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCI 560
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
D ++ + + + M C PN+ T L+ GL +S + ALE+
Sbjct: 561 LDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALEL 620
Query: 395 FEEMLDR----GI--VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+ ML GI P+ + + ++ LC G A ++K+ + +G + +Y L
Sbjct: 621 HKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSL 680
Query: 449 LRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+ GF + G D L++EM + G D + +I LC G++ A ++E ++
Sbjct: 681 IH---GFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQ 737
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+G P+ + Y+ L L ++++ A LF K++
Sbjct: 738 RGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQ 771
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 172/368 (46%), Gaps = 14/368 (3%)
Query: 186 LSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
+ D+ + PD+ T S+++D + G+V +A ++L + G D + + ++ LC
Sbjct: 42 IPDIVTYSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 101
Query: 246 RLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG------F 298
+ A+ LF SM K + +TY ++ G + G + ++ +E++ +
Sbjct: 102 EHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKC 161
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
P +++S +I+GL + R D+A E+F MK +G PD +Y ++I + G +++
Sbjct: 162 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKC 221
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
+ M +P++ T LI K KV +A E+ E M+ RG + T ++ ++ LC
Sbjct: 222 LFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLC 281
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM--QESGYP-- 474
A ++ +K+GC+ AY L++ L GK + L L EM S Y
Sbjct: 282 MKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIK 341
Query: 475 ---SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
D +I LC G++ A ++E +++G + YS L L +++ A
Sbjct: 342 CIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEA 401
Query: 532 YNLFRKIK 539
LF ++
Sbjct: 402 TWLFMSMQ 409
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 133/277 (48%), Gaps = 7/277 (2%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N + SY++I+ L + D + +M GV PD+ + + ++ F R+G+ A
Sbjct: 634 NCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDA 693
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
+ + D G++ D + +V++ LC+ V A+ L M + + N +TY ++ G
Sbjct: 694 KYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKG 753
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM----KEKG 332
++ E ++ ++ G PD +T+ L++GL + G I A+E+ M + G
Sbjct: 754 LCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYG 813
Query: 333 CG--PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
PD +Y+ +I G DE + +K M + PN+ +YT LI G +S K+ D
Sbjct: 814 TNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLED 873
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
A +F EM+D+G+ + T + + C G A+
Sbjct: 874 AKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 123/252 (48%), Gaps = 9/252 (3%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K V DV SY ++ R + + ++M GV PD+ T S+++D + G+
Sbjct: 665 MKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGK 724
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
V +A ++L + G + + ++ LC + A+ LF M K L +V+TY
Sbjct: 725 VIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGT 784
Query: 273 VISGWSKLGQVVEMERVLKEIVAE------GFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
++ G + G + + K+++++ F PD +++S +I+GL + GR D+A E+F
Sbjct: 785 LMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFK 844
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
MK G P+ +Y ++I + G ++ + M + N TY+ +I G K
Sbjct: 845 EMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEG 904
Query: 387 KVADALEVFEEM 398
++ AL F++M
Sbjct: 905 QIDKAL--FQKM 914
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 130/320 (40%), Gaps = 50/320 (15%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF--------------------- 307
T+NI+I+ + +V E + I+ G+ PD +T+S
Sbjct: 12 TFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEGKVI 71
Query: 308 -----------------------LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
LI+GL RI +A +F +M++ GC PD Y ++
Sbjct: 72 EANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLM 131
Query: 345 SNYISVGDFDECMKYYK------GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
G+ + ++ ++ G C+P + +Y+ +I GL K R+ +A E+F+EM
Sbjct: 132 KGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEM 191
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+G++P + TS + C G A ++ + VG + +T +L+ GK
Sbjct: 192 KAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKV 251
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+L M G D Y +I GLC ++ A + + G P + Y L
Sbjct: 252 IEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTL 311
Query: 519 SNKLLASNKLESAYNLFRKI 538
L + K+ A +L +++
Sbjct: 312 MKGLCQTGKINIALHLHQEM 331
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 102/248 (41%), Gaps = 32/248 (12%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
G PDS TF+ LI L R+++ + + +G PD
Sbjct: 5 GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPD-------------------- 44
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
+ +Y+ P++ T + LI L K KV +A E+ E M+ RG + T ++ ++
Sbjct: 45 ------IVTYSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKG 98
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES----G 472
LC A ++ +K+GC+ Y L++ L G + L L EM G
Sbjct: 99 LCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYG 158
Query: 473 YPSDGEI--YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
+ Y +I GLC + + A + +E +G P + Y+ L + S K E
Sbjct: 159 IKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEK 218
Query: 531 AYNLFRKI 538
A LF ++
Sbjct: 219 AKCLFNEM 226
>gi|15232517|ref|NP_188138.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273407|sp|Q9LIL5.1|PP233_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15200
gi|11994509|dbj|BAB02574.1| unnamed protein product [Arabidopsis thaliana]
gi|332642110|gb|AEE75631.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 225/499 (45%), Gaps = 19/499 (3%)
Query: 14 LSSLSSSFSLFSFSTSVRSNLSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPN 73
L L S+ S S+ V + N K N++ L H L L + + + FPN
Sbjct: 10 LFQLQSALSRRRISSLVDFRRVFPPETPNHKNNIT-LSRFHFLG-THFLHSLGAPDKFPN 67
Query: 74 VYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVG 133
+ + + D A+D + + RG +K+K L +DL+ ++V
Sbjct: 68 RFNDDK-------DKQSALDVHNIIKHH-RGSSPEKIKR------ILDKCGIDLTEELVL 113
Query: 134 KVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG 193
+VVNR + + +K YN I+ LG+ + F+ V +M+K
Sbjct: 114 EVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRD 173
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAAS 253
+ +T ++++ + A +V +A+ + R ++FG+ D + + +L LC+ HV A
Sbjct: 174 GFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAE 233
Query: 254 SLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
+LF S + + ++ N++++GW LG V E +R K+I+A PD +++ +I L
Sbjct: 234 TLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALT 293
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+ G++ A+E++ M + PD N VI E ++ ++ +S +PN+
Sbjct: 294 KKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVV 353
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM-MMYKK 432
TY L+ L K R+ E+ EEM +G S +T L Y + ++ ++
Sbjct: 354 TYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVT--FSYLLKYSQRSKDVDIVLER 411
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
K C+++ Y L+ R + K + ++W EM+ SG D Y I GL G+
Sbjct: 412 MAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGK 471
Query: 493 LENAVLVMEESLRKGFCPS 511
+ A+ +E + KG P
Sbjct: 472 IGEALSYFQEMMSKGMVPE 490
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 111/225 (49%), Gaps = 6/225 (2%)
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
D+ PD+ + ++++ + G++ KA+++ + D D + N V+ LC +
Sbjct: 272 DIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKK 331
Query: 248 HVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG--FSPDSLT 304
+ A +F + K NV+TYN ++ K+ + ++ +++E+ +G SP+ +T
Sbjct: 332 RIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVT 391
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
FS+L++ R+ +D +E M + C ++ YN + Y+ ++ + + M
Sbjct: 392 FSYLLKYSQRSKDVDIVLE---RMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEME 448
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
P+ TYT I GL K+ +AL F+EM+ +G+VP T
Sbjct: 449 RSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 104/239 (43%), Gaps = 1/239 (0%)
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
S+ ++ +++ LG+ R ++ +VFD M ++ + Y +++ Y + DE + ++
Sbjct: 143 SMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFE 202
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
+ + ++ + L+ L + + V A +F R + L C G
Sbjct: 203 RRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSR-RREFGCDIKAMNMILNGWCVLG 261
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
H A +K C+ + +Y ++ L+ GK G ++L+ M ++ D +I
Sbjct: 262 NVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICN 321
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
VI LC ++ A+ V E KG P+ + Y+ L L + E + L ++++
Sbjct: 322 NVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMEL 380
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 181/375 (48%), Gaps = 1/375 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
+N ++ L + D V +M G+ PD+ + SI++D F R G+V +A ++ +
Sbjct: 283 FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMR 342
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
+ G+ + S ++++ C+ V A +F MK +L +V +Y+I+I G+ + G +
Sbjct: 343 NSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMD 402
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ +E+ + FSP + + LI+G ++ + +A++ F M++ G PDT A N ++
Sbjct: 403 SAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHIL 462
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
S Y DF++ + + N +Y I + + AL++ ML R ++
Sbjct: 463 SIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVL 522
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P ++ + A+M++ K KVG ++ Y +L+ K + L
Sbjct: 523 PDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRL 582
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+ M+ES D Y ++AG CN G++ A + +E R+G P+ + Y+ N+ L
Sbjct: 583 FKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLK 642
Query: 525 SNKLESAYNLFRKIK 539
NK A+ L+ K+K
Sbjct: 643 LNKNNQAHKLYEKMK 657
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 183/403 (45%), Gaps = 4/403 (0%)
Query: 144 EAMVLFFNWAIK---HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
+ + L F IK PN+ N + +G +L + G P++ T
Sbjct: 188 DGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVT 247
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
+ + G A +++ L + N V++ LCQ + AS +F MK
Sbjct: 248 YGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMK 307
Query: 261 GK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
+L +V +Y+I+I G+ + G+V + V KE+ G P+ ++S LI+G + GR+D
Sbjct: 308 NSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVD 367
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
A+EVF+ MK G PD +Y+ +I + GD D +K+++ M+S N P+ Y LI
Sbjct: 368 KALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLI 427
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
G KS++ A+AL+ F M G+ P T L C + A+ + +K ++ G
Sbjct: 428 KGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVH 487
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+ +Y + R+ L L M + D Y +I+ E AV++
Sbjct: 488 FNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVML 547
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+ + G + Y+ L N ++ K++ AY LF+ +K +R
Sbjct: 548 FIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESR 590
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/439 (20%), Positives = 191/439 (43%), Gaps = 39/439 (8%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
+G + EA +F +K+ + DV SY++++ R+ D V +M G+ P+
Sbjct: 292 QGGILDEASEVF--KEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPN 349
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ + SI++D F + G+V KA+++ +++ G+ D S ++++ C++ + +A +
Sbjct: 350 IYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWE 409
Query: 258 SMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL------------- 303
M + Y +I G+ K Q + + + G PD++
Sbjct: 410 EMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKP 469
Query: 304 ----------------------TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+++ I + R + A+++ M ++ PD Y+
Sbjct: 470 DFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYS 529
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+IS + + ++ + + M+ N+ TYT LI+ + K+ A +F+ M +
Sbjct: 530 TLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKES 589
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
+ P TS + C+ G A ++ + + GC ++ Y + K
Sbjct: 590 RVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQA 649
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRLVYSKLSN 520
L+ +M+E G D +Y +IA CN G++ A + +E ++G C P+ ++Y+ L N
Sbjct: 650 HKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLIN 709
Query: 521 KLLASNKLESAYNLFRKIK 539
+ NK + A L+ +++
Sbjct: 710 SYIKLNKRDQAEKLYEEMR 728
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 165/382 (43%), Gaps = 5/382 (1%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+V K +++++K + V +G+ ++ + + ++ + +V
Sbjct: 131 DVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGV 190
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-----NVMTYNI 272
+ L FG + + + +++ C+ + + + GK+ NV+TY
Sbjct: 191 RLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGT 250
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
I G K+G R+++ + + ++ F+ +I GL + G +D+A EVF MK G
Sbjct: 251 YIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSG 310
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD +Y+ +I + G D+ + +K M + PN+ +Y+ LI G K +V AL
Sbjct: 311 ILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKAL 370
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
EVFEEM + GI+P + + ++ C G +A+ +++ S Y L++
Sbjct: 371 EVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGY 430
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
+ L + MQ+ G D ++++ C A+ + E+ G +
Sbjct: 431 YKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNP 490
Query: 513 LVYSKLSNKLLASNKLESAYNL 534
Y++ +++ + E A L
Sbjct: 491 YSYNEFIHRICRGSVPEKALQL 512
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 146/349 (41%), Gaps = 44/349 (12%)
Query: 197 DLETLSIVMDSFIRA----GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
D+E ++V D I+ + A + R +D G++ + S N +L CL + V
Sbjct: 131 DVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGV 190
Query: 253 SSLFNSM-KGKVLFNVMTYNIVISGWSK-LGQVVEMER---VLKEIVAEGFSPDSLTFSF 307
LF + K N+ TY I+++ + + +G V++ R +L +I G +P+ +T+
Sbjct: 191 RLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGT 250
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
I+GL + G A + + K + + +NAVI G DE
Sbjct: 251 YIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDE------------ 298
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
A EVF+EM + GI+P + + ++ C G A
Sbjct: 299 -----------------------ASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQAS 335
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++K+ R G ++ +Y +L+ G+ L+++ EM+ SG D Y +I G
Sbjct: 336 EVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGF 395
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
C G +++A+ EE F PS Y L S + +A FR
Sbjct: 396 CRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFR 444
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 115/241 (47%), Gaps = 2/241 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SYN + + R + +L M K V PD+ S ++ F + KA+ + ++
Sbjct: 492 SYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKM 551
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQV 283
G+ F+ ++ +++ + A LF MK +V + + Y +++G+ G++
Sbjct: 552 TKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEM 611
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ E+ EG SP+ +T++ I + + + A ++++ MKE+G PD Y +
Sbjct: 612 TRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTML 671
Query: 344 ISNYISVGDFDECMKYYKGMSSYN-CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
I+ + + G+ + + M C PN+ YT LI+ +K K A +++EEM +G
Sbjct: 672 IAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKG 731
Query: 403 I 403
+
Sbjct: 732 L 732
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 190/418 (45%), Gaps = 26/418 (6%)
Query: 125 VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCN 184
VDL+ ++ G+VV G + +V + N++V AL + + F+ +
Sbjct: 238 VDLAWEIYGEVVRGG-------------------IELNVYTLNIMVNALCKDRKFENVMF 278
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
LSDM +GV D+ T + +++++ R G V +A Q+L G++ + N +L+ LC
Sbjct: 279 FLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLC 338
Query: 245 QRLHVG----AASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
+ +G A L ++ + N TYN ++ + ++E + + E+ G P
Sbjct: 339 K---IGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLP 395
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
D ++FS LI L R G + A+ F M+ G PD Y +I + G + +K
Sbjct: 396 DLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMR 455
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
M + C ++ TY ++GL K + ADA +F EM++RG+VP T T+ + C
Sbjct: 456 DEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKD 515
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
G A+ +++ + K Y L+ G+ G +LW +M D Y
Sbjct: 516 GNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISY 575
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
V+ G C+ G L A+ + ++ L KG P+ + + L S + AY K+
Sbjct: 576 GTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKM 633
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 158/353 (44%), Gaps = 1/353 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D+ S++ ++ L R +M + G+ PD +I++D F R G + A+
Sbjct: 393 VLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDAL 452
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+M + G D + N L LC++ A LFN M + ++ + T+ +I G+
Sbjct: 453 KMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGY 512
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G + + + + +V PD +T++ LI+G +AG + A E++D M K PD
Sbjct: 513 CKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDH 572
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+Y V++ + S G E + M PN+ T LI G +S + A E +
Sbjct: 573 ISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSK 632
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ GI+P + + + ++ A ++ + K G + ++ Y L+L GK
Sbjct: 633 MISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGK 692
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
+ +M E G DG Y +I G + ++ A +E L++G P
Sbjct: 693 MQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 173/380 (45%), Gaps = 11/380 (2%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PN A +YN ++ + RR + +M++ GV PDL + S ++ R G +Y+
Sbjct: 360 PNAA----TYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQ 415
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVIS 275
A+ +E G+ D +++ C+ + A + + M + F +V+TYN ++
Sbjct: 416 ALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLN 475
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G K + + + E+V G PD TF+ LI G + G +D A+ +F+ M P
Sbjct: 476 GLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKP 535
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D YN +I + G+ + + M + P+ +Y +++G S + +AL +
Sbjct: 536 DKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLC 595
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
++ML++GI P+ T + ++ C G A K G +Y L+ G+
Sbjct: 596 DQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLI---DGY 652
Query: 456 GKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
K L L +EM++ G + Y ++ G C G+++ A V+ + + G P
Sbjct: 653 LKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDG 712
Query: 513 LVYSKLSNKLLASNKLESAY 532
YS L N ++ + ++ A+
Sbjct: 713 ATYSSLINGHVSQDNMKEAF 732
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 115/268 (42%)
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
N ++ G + G V + E+V G + T + ++ L + + ++ + M+
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
KG D YN +I+ Y G +E + SS EP + TY ++ GL K K
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDR 345
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A +V EML G+ P+ T + L +C A ++ + + G L ++ L+
Sbjct: 346 AKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIG 405
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
L+ G L + EM+ SG D IY +I G C G L +A+ + +E L +G
Sbjct: 406 VLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFM 465
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y+ N L A LF ++
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEM 493
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
++ D SY ++ N+ M ++G+ P+L T + ++ + R+G + KA
Sbjct: 567 DIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKA 626
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISG 276
+ L ++ G+ D+ S N ++ + ++ A L N M+ + L FN++TYN++++G
Sbjct: 627 YEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNG 686
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ G++ E E+VL++++ G +PD T+S LI G + +A D M ++G PD
Sbjct: 687 FCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 95/242 (39%)
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
F L + L+ +A ++ + E F ++ KG NA N ++ + G D
Sbjct: 183 FGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAW 242
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+ Y + E N+ T +++ L K RK + + +M +G+ T + +
Sbjct: 243 EIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAY 302
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
C G A + G + L Y +L L GK D+ EM + G +
Sbjct: 303 CREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNA 362
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
Y ++ +C + A + +E R+G P + +S L L + L A FR+
Sbjct: 363 ATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFRE 422
Query: 538 IK 539
++
Sbjct: 423 ME 424
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 190/418 (45%), Gaps = 26/418 (6%)
Query: 125 VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCN 184
VDL+ ++ G+VV G + +V + N++V AL + + F+ +
Sbjct: 238 VDLAWEIYGEVVRGG-------------------IELNVYTLNIMVNALCKDRKFENVMF 278
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
LSDM +GV D+ T + +++++ R G V +A Q+L G++ + N +L+ LC
Sbjct: 279 FLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLC 338
Query: 245 QRLHVG----AASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
+ +G A L ++ + N TYN ++ + ++E + + E+ G P
Sbjct: 339 K---IGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLP 395
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
D ++FS LI L R G + A+ F M+ G PD Y +I + G + +K
Sbjct: 396 DLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMR 455
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
M + C ++ TY ++GL K + ADA +F EM++RG+VP T T+ + C
Sbjct: 456 DEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKD 515
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
G A+ +++ + K Y L+ G+ G +LW +M D Y
Sbjct: 516 GNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISY 575
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
V+ G C+ G L A+ + ++ L KG P+ + + L S + AY K+
Sbjct: 576 GTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKM 633
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 158/353 (44%), Gaps = 1/353 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D+ S++ ++ L R +M + G+ PD +I++D F R G + A+
Sbjct: 393 VLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDAL 452
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+M + G D + N L LC++ A LFN M + ++ + T+ +I G+
Sbjct: 453 KMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGY 512
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G + + + + +V PD +T++ LI+G +AG + A E++D M K PD
Sbjct: 513 CKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDH 572
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+Y V++ + S G E + M PN+ T LI G +S + A E +
Sbjct: 573 ISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSK 632
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ GI+P + + + ++ A ++ + K G + ++ Y L+L GK
Sbjct: 633 MISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGK 692
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
+ +M E G DG Y +I G + ++ A +E L++G P
Sbjct: 693 MQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 173/380 (45%), Gaps = 11/380 (2%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PN A +YN ++ + RR + +M++ GV PDL + S ++ R G +Y+
Sbjct: 360 PNAA----TYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQ 415
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVIS 275
A+ +E G+ D +++ C+ + A + + M + F +V+TYN ++
Sbjct: 416 ALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLN 475
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G K + + + E+V G PD TF+ LI G + G +D A+ +F+ M P
Sbjct: 476 GLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKP 535
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D YN +I + G+ + + M + P+ +Y +++G S + +AL +
Sbjct: 536 DKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLC 595
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
++ML++GI P+ T + ++ C G A K G +Y L+ G+
Sbjct: 596 DQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLI---DGY 652
Query: 456 GKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
K L L +EM++ G + Y ++ G C G+++ A V+ + + G P
Sbjct: 653 LKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDG 712
Query: 513 LVYSKLSNKLLASNKLESAY 532
YS L N ++ + ++ A+
Sbjct: 713 ATYSSLINGHVSQDNMKEAF 732
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 115/268 (42%)
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
N ++ G + G V + E+V G + T + ++ L + + ++ + M+
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
KG D YN +I+ Y G +E + SS EP + TY ++ GL K K
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDR 345
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A +V EML G+ P+ T + L +C A ++ + + G L ++ L+
Sbjct: 346 AKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIG 405
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
L+ G L + EM+ SG D IY +I G C G L +A+ + +E L +G
Sbjct: 406 VLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFM 465
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y+ N L A LF ++
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEM 493
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
++ D SY ++ N+ M ++G+ P+L T + ++ + R+G + KA
Sbjct: 567 DIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKA 626
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISG 276
+ L ++ G+ D+ S N ++ + ++ A L N M+ + L FN++TYN++++G
Sbjct: 627 YEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNG 686
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ G++ E E+VL++++ G +PD T+S LI G + +A D M ++G PD
Sbjct: 687 FCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 95/242 (39%)
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
F L + L+ +A ++ + E F ++ KG NA N ++ + G D
Sbjct: 183 FGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAW 242
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+ Y + E N+ T +++ L K RK + + +M +G+ T + +
Sbjct: 243 EIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAY 302
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
C G A + G + L Y +L L GK D+ EM + G +
Sbjct: 303 CREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNA 362
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
Y ++ +C + A + +E R+G P + +S L L + L A FR+
Sbjct: 363 ATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFRE 422
Query: 538 IK 539
++
Sbjct: 423 ME 424
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 153/298 (51%), Gaps = 6/298 (2%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ LF ++ +V +YN+++ L + + + S + K G+ PD T ++
Sbjct: 276 EALKLF--GSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTV 333
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
+D +AG+V A+ ML +++ G D S N V+ LC+ V A L + M+ K
Sbjct: 334 FIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG 393
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA---GRID 319
N +++N +I G + G+ + KE++ G P +T++ L++GL +A GRI
Sbjct: 394 CSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIK 453
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
+AI +FD M EKG PD Y+A+I G D+ + M + C PN+ TY LI
Sbjct: 454 EAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLI 513
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
SGL KV +ALE+F M+++G VP T T + + LC A+ ++ + + G
Sbjct: 514 SGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAG 571
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 184/386 (47%), Gaps = 14/386 (3%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA-GQVYK 216
++ DV +YN +V L + D ++ D +G +P++ T S ++ R ++
Sbjct: 185 SLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLES 241
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS-MKGKVLFNVMTYNIVIS 275
A Q+L ++ G K D S N ++ L + V A LF S ++ V TYNI+I
Sbjct: 242 ARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILID 301
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G K +V E + +V G PD++T++ I+GL +AGR++DA+ + M EKGC P
Sbjct: 302 GLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVP 361
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D ++NAVI+ DE GM + C PN ++ LI G ++ K A+ F
Sbjct: 362 DVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTF 421
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSY---GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+EML RG+ P+ T ++ LC G A+ ++ + G + Y L +
Sbjct: 422 KEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSAL---I 478
Query: 453 SGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
G GK G L D L M+ G + Y +I+GLC + +++ A+ + + KG
Sbjct: 479 DGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCV 538
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLF 535
P + Y + + L ++ A LF
Sbjct: 539 PDTITYGTIISALCKQEMVDKALALF 564
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 185/414 (44%), Gaps = 43/414 (10%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ ++N+ + L R V M K G P+ T + ++ G++ A +
Sbjct: 49 DISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALY 108
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN-SMKGKVLFNVMTYNIVISGWSKL 280
R+ G D + N +L C+ + A +F+ ++K + +V+TYN +I+G+ K
Sbjct: 109 ERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKA 168
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
++ E +R+L+ +V+E PD +T++ L+ GL + GR+D+A + + +KG P+ Y
Sbjct: 169 DKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITY 225
Query: 341 NAVISNYI-SVGDFDECMKYYKGMSSYNCEPNMD-------------------------- 373
+ +IS + + + + M C+P++
Sbjct: 226 STLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVL 285
Query: 374 ---------TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
TY LI GLLK +V +A E+F ++ G+ P T T F++ LC G
Sbjct: 286 RQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVE 345
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A++M K + GC + ++ ++ L + L M+ G + + +I
Sbjct: 346 DALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLI 405
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS---NKLESAYNLF 535
G C G+ + A+ +E L++G P+ + Y+ L + L + +++ A LF
Sbjct: 406 CGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLF 459
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 143/311 (45%), Gaps = 16/311 (5%)
Query: 232 DAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLK 291
DA ++ ++L L + + A + K L ++ T+NI ISG + ++ + + V
Sbjct: 15 DAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQTVFD 74
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
+ GF P+ +T++ L+ GL GR+ DA +++ M + G PD YN ++ + VG
Sbjct: 75 GMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVG 134
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
DE +K + G P++ TY LI+G K+ K+ +A + + M+ +VP T
Sbjct: 135 KLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYN 194
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL-------LRRLSGFGKCGMLLDL 464
S + LC G A M+ G ++ Y L LRRL + L
Sbjct: 195 SLVNGLCKNGRVDEARMLIVDK---GFSPNVITYSTLISGLCRELRRLESARQ------L 245
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+M +G D Y +I GL + A+ + LR+G+ P Y+ L + LL
Sbjct: 246 LEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLK 305
Query: 525 SNKLESAYNLF 535
+++ A+ LF
Sbjct: 306 EDRVNEAFELF 316
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 125/240 (52%), Gaps = 6/240 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV S+N ++ L + K D +LS M +G +P+ + + ++ RAG+ KA+
Sbjct: 362 DVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTF 421
Query: 222 GRLEDFGLKFDAESLNVVLWCLC---QRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
+ G+K + N+++ LC Q + A +LF++M KG+V +V+TY+ +I G
Sbjct: 422 KEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP-DVVTYSALIDG 480
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K G++ + R+L + A+G P+ T++ LI GL ++D+A+E+F M EKGC PD
Sbjct: 481 LGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPD 540
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
T Y +IS D+ + + G P Y LI GL +V +AL++ +
Sbjct: 541 TITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 115/247 (46%), Gaps = 15/247 (6%)
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG-CGPDTNAYNAVISNYISVGDFDEC 356
+SPD+ T L+ L ++G+I+ A + + KG C D + +N IS +
Sbjct: 12 YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC--DISTFNIYISGLCRASRIGDA 69
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
+ GM + PN TY L+SGL +++DA ++E M+ G P T + L
Sbjct: 70 QTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHG 129
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ----ESG 472
C G A+ ++ A K G + Y L ++GF K L + +Q ES
Sbjct: 130 FCKVGKLDEALKIFDGAVKRGFVPDVVTYNAL---INGFCKADKLDEAQRILQRMVSESL 186
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS-NKLESA 531
P D Y ++ GLC G+++ A +++ + KGF P+ + YS L + L +LESA
Sbjct: 187 VP-DVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESA 242
Query: 532 YNLFRKI 538
L K+
Sbjct: 243 RQLLEKM 249
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 177/378 (46%), Gaps = 1/378 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D S+ ++K L ++ M EG PD+ + +++ + G AI++L
Sbjct: 143 DTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLL 202
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+E + D ++ LC+ A +LF+ M K + N++T N ++ L
Sbjct: 203 RSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNL 262
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ + +L E+V P++++ + +++ L + G + A +V D M + G PD Y
Sbjct: 263 GEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTY 322
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
A+I + + DE +K + M C PN+ +Y LI+G K ++ A+ +FEEM
Sbjct: 323 TALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCR 382
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+ ++P+T T + + LC G A+ ++++ G L Y++LL L
Sbjct: 383 QKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDK 442
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ L ++ S D +IY VI G+C G+LE+A + KG P+ Y+ +++
Sbjct: 443 AMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTH 502
Query: 521 KLLASNKLESAYNLFRKI 538
L L+ A LF ++
Sbjct: 503 GLCKRGLLDEATKLFMEM 520
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 168/399 (42%), Gaps = 7/399 (1%)
Query: 143 GEAMVLF--FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
GEA+ LF W P DV Y ++ L + +L M K PD+
Sbjct: 161 GEALHLFDKMIWEGFQP----DVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVV 216
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM- 259
++ S + Q +A + + G+ + + N +++ LC ++L N M
Sbjct: 217 YGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMV 276
Query: 260 KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
K++ N ++ V+ K G V + V+ + G PD +T++ LI+G +D
Sbjct: 277 DSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMD 336
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
+A++VFD M KGC P+ +YN +I+ Y + D+ M ++ M PN TY LI
Sbjct: 337 EAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLI 396
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
GL ++ DA+ +F EM+ G +P T L+ LC AM + K
Sbjct: 397 HGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLD 456
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+ Y +++ + G+ DL+ + G + Y + GLC G L+ A +
Sbjct: 457 PDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKL 516
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
E Y+ ++ L +N+ A L ++
Sbjct: 517 FMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEM 555
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 134/276 (48%), Gaps = 6/276 (2%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
NV T N++I+ + L +V VL +I+ G PD+ +F+ LI+GL G+I +A+ +F
Sbjct: 108 NVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLF 167
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M +G PD Y +I+ G ++ + M NC+P++ Y LI L K
Sbjct: 168 DKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKD 227
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP-PHAAMMMYK--KARKVGCKLSL 442
R+ A +F EM+ +GI P+ T S + LC+ G H ++ + ++ + +SL
Sbjct: 228 RQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISL 287
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
T ++ L G D+ M +SG D Y +I G C +++ AV V +
Sbjct: 288 TT---VVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDM 344
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ KG P+ Y+ L N +++ A LF ++
Sbjct: 345 MVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEM 380
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 169/385 (43%), Gaps = 1/385 (0%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H + + + I+ ++ + K + + ++ M G+ ++ TL+++++SF +V
Sbjct: 67 HMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVN 126
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVI 274
A +L ++ G + D S ++ LC +G A LF+ M + +V+ Y +I
Sbjct: 127 FAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLI 186
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G K G R+L+ + PD + + LI L + + A +F M KG
Sbjct: 187 NGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGIS 246
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ N+++ ++G++ M PN + T ++ L K VA A +V
Sbjct: 247 PNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDV 306
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ M G+ P T T+ ++ C A+ ++ GC ++ +Y L+
Sbjct: 307 VDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCK 366
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+ + L+ EM + Y +I GLC++G+L++A+ + E + G P +
Sbjct: 367 IERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVT 426
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
Y L + L + L+ A L + I+
Sbjct: 427 YRILLDYLCKNCHLDKAMALLKAIE 451
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 177/388 (45%), Gaps = 5/388 (1%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N DV Y ++ +L + + N+ S+M +G++P++ T + ++ + G+
Sbjct: 209 NCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHV 268
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG 276
+L + D + +A SL V+ LC+ V A + + M + V +V+TY +I G
Sbjct: 269 NTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDG 328
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
++ E +V +V +G +P+ +++ LI G + R+D A+ +F+ M + P+
Sbjct: 329 HCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPN 388
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
T YN +I VG + + ++ M + P++ TY L+ L K+ + A+ + +
Sbjct: 389 TVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLK 448
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+ + P T ++ +C G A ++ G K ++ Y ++ L G
Sbjct: 449 AIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRG 508
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF-C---PSR 512
L+ EM E+ +DG Y + G + A+ ++EE L +GF C +
Sbjct: 509 LLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTT 568
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKIKI 540
L+ LS+ L ++ ++F ++I
Sbjct: 569 LLVGMLSDDGLDQSEAHKLEDMFPHLRI 596
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 2/200 (1%)
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
+N S Y+ D+ + + M + P++ + ++++ + K ++ + L + +M
Sbjct: 42 HNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMD 101
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
GI + T+ + C + A + K K+GC+ ++ L++ L G+ G
Sbjct: 102 SFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIG 161
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRLVYSKL 518
L L+ +M G+ D IY +I GLC G A+ ++ S+ KG C P +VY L
Sbjct: 162 EALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLL-RSMEKGNCQPDVVVYGTL 220
Query: 519 SNKLLASNKLESAYNLFRKI 538
+ L + A+NLF ++
Sbjct: 221 IHSLCKDRQQTQAFNLFSEM 240
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 177/339 (52%), Gaps = 7/339 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V SY++I+ +L + + + ++ M G++P + T + ++ +GQ +A +
Sbjct: 243 EVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILF 302
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
+ ++ +K D + ++++ LC+ V A S+F M + +++TY+ +I G K
Sbjct: 303 KEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKS 362
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
E +L E+++ PD +TFS ++ + G + +A + + M E+G P+ Y
Sbjct: 363 SLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTY 422
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N+++ Y DE K + M + C P++ +Y LI G KS ++ +A ++F+EM
Sbjct: 423 NSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSH 482
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G+ P++ T T+ + LC G P+AA ++KK GC L Y LL SGF K G
Sbjct: 483 KGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLL---SGFCKHGH 539
Query: 461 L---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
L L L+ +++S + I + ++ G+C G+LE+A
Sbjct: 540 LDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDA 578
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 156/348 (44%), Gaps = 1/348 (0%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
G P + T +++++ + G+ AI + ++ + + + S ++++ LC+ V A
Sbjct: 204 GYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEA 263
Query: 253 SSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
LF M+ + V+TYN +I G GQ + + KE++ PD +TFS L++
Sbjct: 264 VDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDA 323
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
L + G + +A+ VF M + PD Y+++I + E M S N P+
Sbjct: 324 LCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPD 383
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+ T++ + K V++A + M++RG+ P+ T S ++ C + A ++
Sbjct: 384 VVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFD 443
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
GC + +Y +L++ + L+ EM G + + +I+GLC G
Sbjct: 444 IMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAG 503
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ A + ++ G P + YS L + L+ A LF +K
Sbjct: 504 RPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALK 551
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 176/391 (45%), Gaps = 2/391 (0%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
+FN + H N + +N ++ AL R K +D + ++ M GV+ + TL+I+++
Sbjct: 91 YFNQMV-HMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCL 149
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC-QRLHVGAASSLFNSMKGKVLFNV 267
V +LG++ G K + N ++ LC + V A L M V
Sbjct: 150 CHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTV 209
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
T+ ++++G K+G+ +K++V P+ +++S +I+ L + +++A+++F
Sbjct: 210 YTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYH 269
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M+ G P YN++I + G + + +K M +N +P++ T++ L+ L K
Sbjct: 270 MRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGV 329
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
V +AL VF +M+ + P T +S + +C + + + + + + +
Sbjct: 330 VLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSI 389
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
+ G + + M E G + Y ++ G C Q++ A V + + KG
Sbjct: 390 WVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKG 449
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P L Y+ L S +++ A LF ++
Sbjct: 450 CAPDVLSYNILIKGYCKSERIDEAKQLFDEM 480
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 115/269 (42%), Gaps = 36/269 (13%)
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY------ 366
G DDA+ F+ M P +N +++ + + +D + Y+ M +
Sbjct: 80 GSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSV 139
Query: 367 -------NC----------------------EPNMDTYTRLISGLLKSRKVADALEVFEE 397
NC +P++ T+ LI+GL ++ +A+E +
Sbjct: 140 YTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDY 199
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
++ RG P+ T T + LC G AA++ KK ++ C+ + +Y +++ L
Sbjct: 200 IMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRL 259
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+DL++ M+ G Y +I G+CN GQ + A ++ +E L P + +S
Sbjct: 260 VNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSI 319
Query: 518 LSNKLLASNKLESAYNLFRK-IKIARQND 545
L + L + A ++F K I+IA + D
Sbjct: 320 LVDALCKEGVVLEALSVFGKMIQIAMEPD 348
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 108/216 (50%), Gaps = 1/216 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N+ DV ++++ V ++ ++++ M + G+ P++ T + +MD + Q+ +A
Sbjct: 379 NIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEA 438
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISG 276
++ + + G D S N+++ C+ + A LF+ M K L N +T+ +ISG
Sbjct: 439 RKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISG 498
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ G+ + + K++ + G PD +T+S L+ G + G +D+A+ +F+ +K+ P+
Sbjct: 499 LCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPN 558
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
++ G ++ + + +S +P++
Sbjct: 559 HVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 173/378 (45%), Gaps = 1/378 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D ++ +++ L ++ M EG P+ T ++ + G AI++L
Sbjct: 143 DTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLL 202
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ + + + N ++ CL + V A ++F+ M K + NV TYN +I G K
Sbjct: 203 RSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKF 262
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ + ++ E+V P+ + F+ L++ L + G + A +V D M ++G PD Y
Sbjct: 263 SEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTY 322
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
A++ + + DE K + M C PN+ +Y+ LI+G K +++ A+ +FEEM
Sbjct: 323 TALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQ 382
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
R +VP+ T + + LC G A+ ++ + G L Y++LL L
Sbjct: 383 RELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQ 442
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ + ++ S D + Y VI G+C +G+LE A + KG P Y+ + N
Sbjct: 443 AMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMIN 502
Query: 521 KLLASNKLESAYNLFRKI 538
L L A LFR++
Sbjct: 503 GLCLQGLLAEATKLFREM 520
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 180/399 (45%), Gaps = 7/399 (1%)
Query: 143 GEAMVLFFNWAIK--HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
GEA+ LF + PN +Y ++ L + +L M ++ P++ T
Sbjct: 161 GEALHLFDKMVGEGFQPNGV----TYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVIT 216
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM- 259
+ ++D + QV +A+ + + G+ + + N ++ LC+ ++L N M
Sbjct: 217 YNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMV 276
Query: 260 KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
K++ NV+ + ++ K G V V+ ++ G PD +T++ L++G +D
Sbjct: 277 DSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMD 336
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
+A +VFDTM KGC P+ +Y+ +I+ Y + D+ M ++ M PN+ TY LI
Sbjct: 337 EADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLI 396
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
GL ++ DA+ +F EM+ G +P T L+ LC AM M K
Sbjct: 397 HGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLA 456
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+ +Y +++ + G+ DL+ + G D Y +I GLC G L A +
Sbjct: 457 PDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKL 516
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
E G P Y+ ++ L +N+ SA L +++
Sbjct: 517 FREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEM 555
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 177/385 (45%), Gaps = 1/385 (0%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H V + I+ ++ K + + ++ M G+ D+ TL+IV++SF +V
Sbjct: 67 HMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVD 126
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVI 274
+L ++ G + D + ++ LC +G A LF+ M G+ N +TY +I
Sbjct: 127 FGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLI 186
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G K+G R+L+ +V + P+ +T++ +I+ L + ++++A+ +F M KG
Sbjct: 187 HGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGIS 246
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ + YN++I ++ M PN+ +T L+ L K V A +V
Sbjct: 247 PNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDV 306
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ M+ RG+ P T T+ ++ C A ++ + GC ++ +Y L+
Sbjct: 307 VDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCK 366
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+ + L+ EM + + Y +I GLC++G+L +A+ + E + G P +
Sbjct: 367 IQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVT 426
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
Y L + L + L+ A + + I+
Sbjct: 427 YRILLDYLCKTRHLDQAMAMLKAIE 451
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 165/360 (45%), Gaps = 3/360 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ +F K ++ +V +YN I+ L + + + ++++M + P++ +
Sbjct: 232 EALNIFSEMIAK--GISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTT 289
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
++D+ + G V A ++ + G++ D + ++ C R + A +F++M K
Sbjct: 290 LVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKG 349
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
NV++Y+ +I+G+ K+ ++ + + +E+ P+ +T++ LI GL GR+ DAI
Sbjct: 350 CAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAI 409
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+F M G PD Y ++ D+ M K + N P++ +Y +I G+
Sbjct: 410 ALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGM 469
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+ ++ A ++F + +G+ P T T + LC G A ++++ GC
Sbjct: 470 CRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDD 529
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L+ R + + L EM G+ +D ++ L + G ++ ++ E
Sbjct: 530 CTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHE 589
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 159/352 (45%), Gaps = 1/352 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N +V +YN I+ L + + + N+ S+M +G++P++ T + ++ + +
Sbjct: 209 NCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHV 268
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
++ + D + + ++ LC+ V A + + M + V +V+TY ++ G
Sbjct: 269 ATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDG 328
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
++ E ++V +V +G +P+ +++S LI G + RID A+ +F+ M ++ P+
Sbjct: 329 HCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPN 388
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN +I VG + + + M + P++ TY L+ L K+R + A+ + +
Sbjct: 389 IVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLK 448
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+ + P + ++ +C G AA ++ G + Y +++ L G
Sbjct: 449 AIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQG 508
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L+ EM G D Y + G + +A+ +++E L +GF
Sbjct: 509 LLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGF 560
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/252 (18%), Positives = 101/252 (40%), Gaps = 35/252 (13%)
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC--------- 368
ID+A+ F+ M P + ++++ ++ + + K M S
Sbjct: 55 IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114
Query: 369 --------------------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+P+ T+T LI GL K+ +AL +F++M+ G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P+ T + + LC G AA+ + + + C+ ++ Y ++ L + L
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+++ EM G + Y +I GLC + ++ +M E + P+ ++++ L + L
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294
Query: 523 LASNKLESAYNL 534
+ A+++
Sbjct: 295 CKEGMVTIAHDV 306
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 81/186 (43%)
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
DE + + M P++ + ++++ + + + L + ++M GI T+
Sbjct: 55 IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
+ C + K K+G + + L+R L GK G L L+ +M G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
+ +G Y +I GLC +G A+ ++ ++K P+ + Y+ + + L ++ A
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234
Query: 533 NLFRKI 538
N+F ++
Sbjct: 235 NIFSEM 240
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 183/415 (44%), Gaps = 20/415 (4%)
Query: 125 VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCN 184
VD +L V+ K++ G+ D ++ +V+ L +
Sbjct: 107 VDFALSVLAKILKLGH-------------------QPDTATFTTLVRGLCVVGKIGEALD 147
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V M EG P++ T +M+ + Q+ +A+ + + G+ D + N ++ LC
Sbjct: 148 VFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALC 207
Query: 245 QRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
++L N M K K++ NV++ NIV+ K G+V E V+ ++ G PD +
Sbjct: 208 NLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVV 267
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T++ L++G +D+A++VFD M GC + +YN +I+ Y + D+ M ++ M
Sbjct: 268 TYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEM 327
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
PN TY+ LI GL ++ DA+ +F EM+ G +P+ T + L+ LC
Sbjct: 328 CRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRL 387
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
AM + K + Y + + + G DL+ + G D + +
Sbjct: 388 AEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIM 447
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
I GLC G L+ A + E G + Y+ ++ LL +NK A L ++
Sbjct: 448 IRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEM 502
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 195/435 (44%), Gaps = 38/435 (8%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
N +A+ F HP + + ++ ++ + K + + ++ M G+ PD+
Sbjct: 35 NTLDDALSSFHRMLHMHP--PPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVY 92
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
TL+IV++SF +V A+ +L ++ G + D + ++ LC +G A +F+ M
Sbjct: 93 TLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKM 152
Query: 260 KGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI--------- 309
G+ NV+TY +++G K Q+ E + E++A+G SPD T++ LI
Sbjct: 153 VGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEW 212
Query: 310 --------------------------EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ L + G++ +A +V D M + G PD Y A+
Sbjct: 213 KHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAAL 272
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ + + DE +K + M C N+ +Y LI+G K +++ A+ +FEEM + +
Sbjct: 273 MDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQEL 332
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+P+T T ++ + LC G A+ ++ + G +L Y +LL L + +
Sbjct: 333 IPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMA 392
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L ++ S D ++Y I G+C G LE A + +G P ++ + L
Sbjct: 393 LLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLC 452
Query: 524 ASNKLESAYNLFRKI 538
L+ A LFR++
Sbjct: 453 KRGLLDEASKLFREM 467
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 176/363 (48%), Gaps = 3/363 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ LF K ++ D+ +YN ++ AL + + +L++M K + P++ +L+I
Sbjct: 179 EALNLFSEMIAK--GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNI 236
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
V+D+ + G+V +A ++ + G++ D + ++ C R + A +F+ M +
Sbjct: 237 VVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNG 296
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ NV++YN +I+G+ K+ ++ + + +E+ + P+++T+S LI GL GR+ DAI
Sbjct: 297 CVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAI 356
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+F+ M G P+ Y+ ++ E M K + N +P++ Y I G+
Sbjct: 357 ALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGM 416
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
++ + A ++F + RG+ P T + LC G A ++++ + GC +
Sbjct: 417 CRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNG 476
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y + + L K + L EM G+ +D ++ L + G ++ ++ E
Sbjct: 477 CTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQILCE 536
Query: 503 SLR 505
+R
Sbjct: 537 FMR 539
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 82/186 (44%)
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+++ N S + D+ + + M + P + + +L++ + K + + L + +
Sbjct: 21 SSSQNNFQSKSLHFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSK 80
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+M GI P T+T + C A+ + K K+G + + L+R L G
Sbjct: 81 KMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVG 140
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K G LD++ +M G+ + Y ++ GLC QL A+ + E + KG P Y+
Sbjct: 141 KIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYN 200
Query: 517 KLSNKL 522
L + L
Sbjct: 201 SLIHAL 206
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 191/419 (45%), Gaps = 26/419 (6%)
Query: 125 VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCN 184
VDL V+ K++ G + + ++N ++ L + F
Sbjct: 173 VDLGFSVLAKIIKLG-------------------LQLTIVTFNTLINGLCKVGKFGQAVE 213
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ DM G PD+ T + +++ + G+ A + ++ + G + D + + ++ LC
Sbjct: 214 LFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLC 273
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ V A +F+ MK K + N+ TYN +I G + E +L E+++ P+ +
Sbjct: 274 KDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIV 333
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
TFS LI + G + +A V TM E G P+ Y+++++ Y + E K + M
Sbjct: 334 TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVM 393
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ C+P++ +Y LI+G K++++ +A ++F EM+ +G+ P + + ++ LC G
Sbjct: 394 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 453
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIY 480
A ++K G L Y +L L GF K G L L+ MQ + + +Y
Sbjct: 454 REAHDLFKNMLTNGNLPDLCTYSIL---LDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMY 510
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I +C L+ A + E +G P+ +Y+ + N L L+ A FR ++
Sbjct: 511 NILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNME 569
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 185/393 (47%), Gaps = 3/393 (0%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGR-RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
+FN + H + +N ++ A+ + R + D + ++ M G++PD TL ++++
Sbjct: 108 YFNHML-HRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINC 166
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFN 266
F + +V +L ++ GL+ + N ++ LC+ G A LF+ M + +
Sbjct: 167 FFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPD 226
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V TY +I+G K+G+ V + +++ G PD +T+S +I+ L + R+++A+++F
Sbjct: 227 VHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFS 286
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
MK KG P+ YN++I + + E M S N PN+ T++ LI+ K
Sbjct: 287 YMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEG 346
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
V +A V + M + G+ P+ T +S + A ++ GCK + +Y
Sbjct: 347 NVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYN 406
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
+L+ + G L++EM G D Y +I GLC +G+L A + + L
Sbjct: 407 ILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTN 466
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G P YS L + L A+ LFR ++
Sbjct: 467 GNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQ 499
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 170/324 (52%), Gaps = 1/324 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K ++ ++ +YN +++ L + +L++M + P++ T S++++ F + G
Sbjct: 288 MKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGN 347
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
V++A +L + + G++ + + + ++ + V A LF+ M K +V +YNI
Sbjct: 348 VFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNI 407
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I+G+ K ++ E +++ E++ +G +PD ++++ LI+GL + GR+ +A ++F M G
Sbjct: 408 LINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG 467
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD Y+ ++ + G + + ++ M S +PNM Y LI + KSR + +A
Sbjct: 468 NLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEAR 527
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
++F E+ +G+ P+ T+ + LC G A+ ++ + GC + +Y +++R
Sbjct: 528 KLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGF 587
Query: 453 SGFGKCGMLLDLWHEMQESGYPSD 476
+ L EM+E G+ +D
Sbjct: 588 LQHKDESRAVQLIGEMREKGFVAD 611
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 164/348 (47%), Gaps = 1/348 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y+ I+ +L + + + ++ S M +G++P++ T + ++ + +A ML
Sbjct: 261 DVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAML 320
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ + + + ++++ C+ +V A + +M + V NV+TY+ +++G+S
Sbjct: 321 NEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQ 380
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+VVE ++ ++ +G PD +++ LI G +A RI +A ++F+ M +G PD +Y
Sbjct: 381 AEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSY 440
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I +G E +K M + P++ TY+ L+ G K +A A +F M
Sbjct: 441 NTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQS 500
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+ P+ ++ +C A ++ + G + ++ Y ++ L G
Sbjct: 501 TYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDE 560
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L+ + M+E G P + Y +I G AV ++ E KGF
Sbjct: 561 ALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGF 608
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 129/257 (50%), Gaps = 11/257 (4%)
Query: 157 PNV---AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
PNV + + Y++ + + RK FD M +G PD+ + +I+++ + +A +
Sbjct: 365 PNVVTYSSLMNGYSLQAEVVEARKLFDVMIT-------KGCKPDVFSYNILINGYCKAKR 417
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF-NSMKGKVLFNVMTYNI 272
+ +A Q+ + GL D S N ++ LCQ + A LF N + L ++ TY+I
Sbjct: 418 IGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSI 477
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
++ G+ K G + + R+ + + + P+ + ++ LI+ + ++ + +A ++F + +G
Sbjct: 478 LLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQG 537
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ Y +I+ G DE ++ ++ M C PN +Y +I G L+ + + A+
Sbjct: 538 LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAV 597
Query: 393 EVFEEMLDRGIVPSTGT 409
++ EM ++G V T
Sbjct: 598 QLIGEMREKGFVADVAT 614
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 123/299 (41%), Gaps = 11/299 (3%)
Query: 248 HVGAASSLFNSMKGKVLFNVMTYN----IVISGWSKLGQVVEMER-------VLKEIVAE 296
H ASS N FN M + +I L +V+M + K++
Sbjct: 92 HQNDASSFRNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELA 151
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
G SPD+ T LI + R+D V + + G +N +I+ VG F +
Sbjct: 152 GLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQA 211
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
++ + M + +P++ TYT +I+GL K + A +F +M + G P T ++ ++
Sbjct: 212 VELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDS 271
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
LC + A+ ++ + G ++ Y L++ L F + + +EM +
Sbjct: 272 LCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPN 331
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ +I C G + A V++ G P+ + YS L N ++ A LF
Sbjct: 332 IVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLF 390
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 169/341 (49%), Gaps = 1/341 (0%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
PD+ + V+ F + ++ A Q+L R++ G D + N+++ LC R +G A +
Sbjct: 135 PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKV 194
Query: 256 FNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
+ + + V+TY I+I G + E ++L+E++A G PD T++ +I G+ +
Sbjct: 195 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 254
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G ++ A E+ ++ KGC PD +YN ++ +++ G +DE K M S CEPN T
Sbjct: 255 EGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 314
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y+ LIS L + ++ +A+ V + M+++ + P T + + LC G A+ +
Sbjct: 315 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 374
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
GC + Y +L L G L+++++++ G P + Y +I+ L + G
Sbjct: 375 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 434
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
A+ ++ + KG P + Y+ L + L +E A L
Sbjct: 435 RALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLL 475
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 174/355 (49%), Gaps = 1/355 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +YN+++ +L R+ VL + + P + T +I++++ I G + +A+++L
Sbjct: 171 DIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLL 230
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ GL D + N ++ +C+ V A+ L S+ K +V++YNI++ +
Sbjct: 231 EEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQ 290
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ E E+++ E+ + G P+ +T+S LI L R GRID+AI V M EK PDT +Y
Sbjct: 291 GKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSY 350
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +IS G D + M S C P++ Y +++ L K+ ALE+F ++
Sbjct: 351 DPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRG 410
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G P+ + + + L S G A+ M G Y L+ L G
Sbjct: 411 MGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEE 470
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
+ L +M++SG+ Y V+ GLC + ++++A+ + E + KG P+ Y
Sbjct: 471 AIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTY 525
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 119/292 (40%), Gaps = 36/292 (12%)
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G+ E L+ +V +G++PD + + LI+G I+ A V + + E PD
Sbjct: 80 KAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEIL-ESHTEPDVF 138
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSY-------------------------------- 366
AYNAVIS + V + + M +
Sbjct: 139 AYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQL 198
Query: 367 ---NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
NC P + TYT LI + + +A+++ EEML RG++P T + + +C G
Sbjct: 199 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 258
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A + GCK + +Y +LLR GK L EM G + Y +
Sbjct: 259 ERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 318
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
I+ LC G+++ A+ V++ + K P Y L + L +L+ A +
Sbjct: 319 ISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIM 370
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 170/357 (47%), Gaps = 1/357 (0%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
++L M + P + T +I++D+ + G++ A+ +E G+K + + N ++
Sbjct: 251 DLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSF 310
Query: 244 CQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C + L M K+ NV+T++ +I K G++ E + + E++ G P++
Sbjct: 311 CSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNT 370
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+T++ LI GL R+D+A ++ D M KGC PD YN +I+ + D+ M+ ++
Sbjct: 371 ITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRK 430
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
MS + TY+ LI G +SRK+ A +VF+EM+ +G+ P T L+ LC G
Sbjct: 431 MSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGE 490
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A+ + + K +L + Y +++ + K L+ + G D + Y
Sbjct: 491 LEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNI 550
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+++GLC L A + + G+ P Y+ L L N + ++ L ++K
Sbjct: 551 MLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMK 607
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 190/397 (47%), Gaps = 7/397 (1%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+VL ++ +A D+ + N+++ RR+ F + + + K G P+ T + ++
Sbjct: 108 LVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLL 167
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VL 264
+ G+V++A++++ + D +LN ++ LC + V A L M
Sbjct: 168 NGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQ 227
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
N TY +++ K G +L+++ P +T++ +I+ L + GR+DDA+
Sbjct: 228 PNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSF 287
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F M+ KG + YN++I ++ S G +D+ + + M + PN+ T++ LI L+K
Sbjct: 288 FSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVK 347
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
K+ +A +++ EM+ RGI P+T T S + LC+ A M GC +
Sbjct: 348 EGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWT 407
Query: 445 YKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
Y +L ++GF K + D L+ +M G +D Y +I G C +L A V +
Sbjct: 408 YNIL---INGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQ 464
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
E + +G P + Y+ L + L + +LE A + ++
Sbjct: 465 EMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQM 501
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 162/338 (47%), Gaps = 13/338 (3%)
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF---- 265
R Q + + ++E G+ +D +LN+++ C C+R +G A F++M GK+
Sbjct: 102 RTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFA---FSAM-GKIFKLGYE 157
Query: 266 -NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
N +T+N +++G G+V E ++ +V PD +T + ++ GL R+ +A+++
Sbjct: 158 PNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDL 217
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
M GC P+ Y +++ G+ + + M +P++ TYT +I L K
Sbjct: 218 IARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCK 277
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG--PPHAAMMMYKKARKVGCKLSL 442
++ DAL F EM +GI + T S + CS+G A ++ RK+ ++
Sbjct: 278 DGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKI--TPNV 335
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
+ L+ L GK DL++EM G + Y +I GLCN +L+ A +M+
Sbjct: 336 VTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDL 395
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+ KG P Y+ L N + +++ LFRK+ +
Sbjct: 396 MVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSL 433
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 133/290 (45%), Gaps = 4/290 (1%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
++ +V G L+ EA L+ + + + +YN ++ L K D ++ M
Sbjct: 341 LIDSLVKEGKLT-EAKDLYNEMITR--GIEPNTITYNSLIYGLCNDKRLDEANQMMDLMV 397
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+G +PD+ T +I+++ F +A QV +++ ++ G+ D + + ++ CQ +
Sbjct: 398 SKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLI 457
Query: 251 AASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A +F M + V +MTY I++ G G++ E +L ++ D ++ +I
Sbjct: 458 VAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIII 517
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
G+ A ++DDA +F ++ KG D +YN ++S E ++ M E
Sbjct: 518 HGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYE 577
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
P+ TY LI L+ + ++++ EEM G T+ ++ L S
Sbjct: 578 PDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSS 627
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/342 (19%), Positives = 152/342 (44%), Gaps = 36/342 (10%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
L F ++ + +V +YN ++ + +D +L DM + P++ T S ++DS
Sbjct: 285 LSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDS 344
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFN 266
++ G++ +A + + G++ + + N +++ LC + A+ + + M K +
Sbjct: 345 LVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPD 404
Query: 267 VMTYNIVISGWSKLGQV-----------------------------------VEMERVLK 291
+ TYNI+I+G+ K QV + ++V +
Sbjct: 405 IWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQ 464
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
E+V++G P +T++ L++GL G +++A+ + D M + D YN +I +
Sbjct: 465 EMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNAN 524
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
D+ + + S + ++ +Y ++SGL K +++A +F +M + G P T
Sbjct: 525 KVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYN 584
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+ + ++ + ++ ++ G + K+++ LS
Sbjct: 585 TLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLS 626
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 92/255 (36%), Gaps = 35/255 (13%)
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS-------------S 365
DDA+ +F +M P +N + +D + K M
Sbjct: 72 DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131
Query: 366 YNC----------------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
NC EPN T+ L++GL +V +A+E+ + M+
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
VP T+ + + LC A+ + + GC+ + Y +L R+ G LD
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALD 251
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L +M+ Y +I LC G+L++A+ E KG + Y+ L
Sbjct: 252 LLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFC 311
Query: 524 ASNKLESAYNLFRKI 538
+ + + L R +
Sbjct: 312 SFGRWDDGAQLLRDM 326
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 78/186 (41%)
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
D+ + ++ M P + + RL L ++++ L + ++M +GI T+
Sbjct: 72 DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
+ C A K K+G + + + LL L G+ ++L M S +
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
D ++ GLC ++ AV ++ + G P++ Y + N++ S SA +
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALD 251
Query: 534 LFRKIK 539
L RK++
Sbjct: 252 LLRKME 257
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 176/344 (51%), Gaps = 7/344 (2%)
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
++ N +++ L R D C +M P E + ++ + ++ ++ + + R
Sbjct: 267 EAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQR 326
Query: 224 LE---DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSK 279
++ +F + E+ N+++ LC+ + A L N M L +V+TY+ ++ G K
Sbjct: 327 MKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCK 386
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
LG++ +L+E+ EG PDS T + ++ L +AG++D A+ +TMK +G PD
Sbjct: 387 LGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVT 446
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YN ++ G DE + + M + C P++ +YT +I+ L +S + A A +F+EM+
Sbjct: 447 YNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMV 506
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
RG++P T S L+ L G A+ + K + CK +K++L L GK
Sbjct: 507 KRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL---CKPDFVMHKMVLDGLCKAGKAE 563
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
++ M ++G+P+D Y V++GL +G+++ A +++++
Sbjct: 564 DACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDA 607
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 201/432 (46%), Gaps = 25/432 (5%)
Query: 131 VVGKVVNR-GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDM 189
VVG+V+ G +S +V F+W + V +YN + AL + M
Sbjct: 7 VVGEVLRHLGKIS--TIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64
Query: 190 AKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHV 249
+ G PD T SIV+ +AG++ KA ++LG+L + G+K + + +VV+ C+ V
Sbjct: 65 QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRV 124
Query: 250 GAASSLFNSMK--GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
A +F +M G + +V+T+N ++ G ++ E + + + G P+ +++S
Sbjct: 125 DDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYST 184
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
L++GL +AGR+D+A +++ M EK C PD AY + ++ E + M +
Sbjct: 185 LLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKG 244
Query: 368 CEPNMDTYT-----------------RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
+ + ++ ++I L +S + +A + FEEM+ R PS
Sbjct: 245 SKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELF 304
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVG---CKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
+ + +C ++++++ + + C +L Y +++ L + +L +E
Sbjct: 305 NTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNE 364
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
M G D Y ++ GLC +G+L+ A ++EE ++G P + + N L + K
Sbjct: 365 MANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGK 424
Query: 528 LESAYNLFRKIK 539
++ A + +K
Sbjct: 425 VDYALSHLETMK 436
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 192/458 (41%), Gaps = 46/458 (10%)
Query: 96 LLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDV----------VGKVVN-----RGN 140
LL + R GV L + VI+ VD +L++ V VV +G
Sbjct: 95 LLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGL 154
Query: 141 LSGEAM---VLFFNWAIK---HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
SGE M + F + K PNV SY+ ++ L + D C + +M ++
Sbjct: 155 CSGERMSEAFVLFEYMAKAGCEPNVI----SYSTLLDGLCKAGRLDEACRLWEEMVEKSC 210
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
PDL + + +A +V +A ++ G K DA + + V+ LC++ H A
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ- 269
Query: 255 LFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
N +I + G + E + +E+++ P + F+ LI + +
Sbjct: 270 ----------------NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCK 313
Query: 315 AGRIDDAIEVFD---TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
+ R+ D + +F +MKE C P+ YN ++ N DE + M++Y P+
Sbjct: 314 SKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPD 373
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+ TY+ L+ GL K K+ A ++ EEM G+ P + T S L L G A+ +
Sbjct: 374 VVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLE 433
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ G L Y LL L G+ + +M + D Y +I LC G
Sbjct: 434 TMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSG 493
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
Q A + +E +++G P ++Y L + LA N LE
Sbjct: 494 QAAGAHAIFQEMVKRGVLPDTVLYHSLLDG-LARNGLE 530
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 191/387 (49%), Gaps = 3/387 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++H VA +V +YN++V+AL R + V+ DM G P+ T + ++ +F RAG+
Sbjct: 2 VRH-GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 214 VYKAIQMLGRLEDFG-LKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYN 271
+ A +++ + + G K + + N ++ LC+ + A +F+ M + L +V++YN
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
++SG+ K+G + E V E+ G PD +TF+ LI +AG ++ A+ + M+E+
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G + + A+I + G D+ + + M +P++ Y LI+G K ++ A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
E+ EM + + P T ++ + C G +A + +K K G Y L+R
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L + +L+ M + G D Y +I G C G +E A+ + +E +RKG P
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
+ YS L N L S + + A+ L K+
Sbjct: 361 VVTYSVLINGLSKSARTKEAHRLLFKL 387
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 180/371 (48%), Gaps = 20/371 (5%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+A DV SYN ++ + V S+M + G+ PD+ T + ++ + +AG + +A+
Sbjct: 112 LAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAV 171
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ ++ + GL+ + + ++ C++ + A M K + +V+ YN +I+G+
Sbjct: 172 ALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGY 231
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
KLG++ +++E+ A+ PD +T+S +I G + G +D A ++ M +KG PD
Sbjct: 232 CKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDA 291
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y+++I ++ + ++ M +P+ TYT LI G K V AL + +E
Sbjct: 292 ITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDE 351
Query: 398 MLDRGIVPSTGTITSFLEPLC-SYGPPHAAMMMYK-------------KARKVGCKLSLT 443
M+ +G++P T + + L S A +++K A + C S
Sbjct: 352 MIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCC--SKA 409
Query: 444 AYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+K ++ L GF G++ + ++ M + + DG +Y +I G C G + A+
Sbjct: 410 EFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFH 469
Query: 501 EESLRKGFCPS 511
++ LR GF P+
Sbjct: 470 KQMLRSGFSPN 480
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 124/251 (49%), Gaps = 1/251 (0%)
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+V G +P+ T++ L+ L GR+++A+ V M+ GC P+ YN +++ + G+
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 353 FDECMKYYKGMSSY-NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
D + M N +PN+ T+ +++GL K+ ++ A +VF+EM+ G+ P +
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
+ L C G H ++ ++ + + G + + L+ G + L +M+E
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G + + +I G C G L++A+L +EE + G PS + Y+ L N +++ A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240
Query: 532 YNLFRKIKIAR 542
L R+++ R
Sbjct: 241 RELIREMEAKR 251
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 204/435 (46%), Gaps = 8/435 (1%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
+ L + G + D +++ N+ L + N+G SG+A L A + DV
Sbjct: 170 ILLHRTPELGCVPD-VFSYNILLK-----SLCNQGK-SGQADDLLRMMAEGGTVCSPDVV 222
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ + + C++ +M + G+ PDL T S V+ + +A + KA L ++
Sbjct: 223 AYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQM 282
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
+ G+ D + N +++ A +F M+ + +L +V+ N ++ K G++
Sbjct: 283 VNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKI 342
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E V + +G +PD +++ ++ G G + D ++FD M G PD +N +
Sbjct: 343 KEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVL 402
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I Y + G D+ M + M + +P++ TY +I+ L + K+ DA+E F +M+D+G+
Sbjct: 403 IKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGV 462
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
VP ++ C++G A + + G +L + + ++ L G+ +
Sbjct: 463 VPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQN 522
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
++ G D +Y ++ G C +G++E A+ V + + G P+ + Y L N
Sbjct: 523 IFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYC 582
Query: 524 ASNKLESAYNLFRKI 538
+++ +LFR++
Sbjct: 583 KIGRIDEGLSLFREM 597
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 186/399 (46%), Gaps = 3/399 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA +F A+K N DV SY +++ + M ++ M +G+ PD+ T ++
Sbjct: 344 EARDVFDTMAMKGQN--PDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNV 401
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
++ ++ G + KA+ + + D G+K + V+ LC+ + A FN M +
Sbjct: 402 LIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQG 461
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
V+ + Y+ +I G+ G +++ + ++ EI+ G D + F +I L + GR+ DA
Sbjct: 462 VVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQ 521
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+FD G PD YN ++ Y VG ++ ++ + M S EPN+ Y L++G
Sbjct: 522 NIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 581
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K ++ + L +F EML +GI PST ++ L G A + + + + G ++
Sbjct: 582 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNK 641
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y ++LR L + L+ E++ D +IAG+ ++E A +
Sbjct: 642 CTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFAS 701
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
R G P + YS + LL +E A ++F ++ A
Sbjct: 702 ISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNA 740
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 179/382 (46%), Gaps = 3/382 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D+ +Y+ +V AL + + D L M +GV PD T + ++ + GQ +A+
Sbjct: 252 IPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAV 311
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
++ + + D +LN ++ LC+ + A +F++M KG+ +V +Y I+++G
Sbjct: 312 RVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNP-DVFSYTIMLNG 370
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
++ G +V+M + ++ +G +PD TF+ LI+ G +D A+ +F+ M++ G P
Sbjct: 371 YATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPH 430
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y VI+ +G D+ M+ + M P+ Y LI G + A E+
Sbjct: 431 VVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELIS 490
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
E+++ G+ S + LC G A ++ VG Y +L+ G
Sbjct: 491 EIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVG 550
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K L ++ M +G + Y ++ G C IG+++ + + E L+KG PS ++Y+
Sbjct: 551 KMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYN 610
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
+ + L + + A F ++
Sbjct: 611 IIIDGLFEAGRTVPAKVKFHEM 632
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 170/381 (44%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+A D+ ++NV++KA D + ++M GV P + T V+ + R G++ A+
Sbjct: 392 IAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAM 451
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS-MKGKVLFNVMTYNIVISGW 277
+ ++ D G+ D + + ++ C + A L + M + +++ + +I+
Sbjct: 452 EKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNL 511
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
KLG+V++ + + V G PD++ ++ L++G G+++ A+ VFD M G P+
Sbjct: 512 CKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 571
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +++ Y +G DE + ++ M +P+ Y +I GL ++ + A F E
Sbjct: 572 VGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHE 631
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M + GI + T + L L A+ ++K+ R + K+ + ++ + +
Sbjct: 632 MTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 691
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
DL+ + SG Y +I L G +E A + G P + +
Sbjct: 692 VEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNH 751
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ +LL N++ A KI
Sbjct: 752 VVRELLKKNEIVRAGAYLSKI 772
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 165/387 (42%), Gaps = 45/387 (11%)
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA-----------------ESL 236
++P T +I+MD RA + A+ G+L GL+ DA E+L
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168
Query: 237 -------------------NVVLWCLCQRLHVGAASSLFNSMK--GKVLF-NVMTYNIVI 274
N++L LC + G A L M G V +V+ YN VI
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ K G V + + KE+V G PD +T+S ++ L +A +D A M KG
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN +I Y S G + E ++ +K M + P++ L+ L K K+ +A +V
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F+ M +G P + T L + G ++ G + + +L++
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIK---A 405
Query: 455 FGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
+ CGML + +++EM++ G Y VIA LC IG++++A+ + + +G P
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y L L A L +I
Sbjct: 466 KYAYHCLIQGFCTHGSLLKAKELISEI 492
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 92/193 (47%), Gaps = 1/193 (0%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
A+ + +V Y +V + D ++ +M ++G+ P +I++D AG
Sbjct: 561 AMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 620
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYN 271
+ A + + G+ + + ++VL L + A LF ++ V +++T N
Sbjct: 621 RTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLN 680
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I+G + +V E + + I G P ++T+S +I L + G +++A ++F +M+
Sbjct: 681 TMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNA 740
Query: 332 GCGPDTNAYNAVI 344
GC PD+ N V+
Sbjct: 741 GCEPDSRLLNHVV 753
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 190/436 (43%), Gaps = 14/436 (3%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
L+ + G + DA+ V +L G V L E +++ A DV
Sbjct: 201 ALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLM---------GCAADVN 251
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++N +V L ++ M G P + T ++ R Q +A MLGR+
Sbjct: 252 TFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRV 311
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
+ + LN V+ + A+ L+ M K +V TYNI++ G KLG+
Sbjct: 312 PEVNVVM----LNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRC 367
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
R+L E+ +G +P+ +T+S L+ R G DDA + D M KG ++ YN +
Sbjct: 368 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGI 427
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I G DE M+ + M S C+P++ TY +I L + ++ +A +F +L+ G+
Sbjct: 428 IYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGV 487
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
V + T + + L G + + + GC L + +Y L++ L G +
Sbjct: 488 VANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMM 547
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L EM G + Y +I LC G++ +A+ + +E L +G P + Y+ L N L
Sbjct: 548 LLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLC 607
Query: 524 ASNKLESAYNLFRKIK 539
+A NL K+
Sbjct: 608 KVGWTHAALNLLEKLP 623
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 141/290 (48%), Gaps = 1/290 (0%)
Query: 161 KDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
DV +YN+++ L + +L +M ++G P++ T S ++ SF R G A M
Sbjct: 349 PDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAM 408
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSK 279
L ++ G +++ N +++ L + + A L MK + ++ TYN +I
Sbjct: 409 LDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCN 468
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
Q+ E E + ++ EG + +T++ LI L +GR + + + + M GC D +
Sbjct: 469 NDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVS 528
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YN +I G+ D M + M + +PN +Y LI+ L K+ KV DALE+ +EML
Sbjct: 529 YNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML 588
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
++G+ P T + + LC G HAA+ + +K + Y +L+
Sbjct: 589 NQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILI 638
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 152/324 (46%), Gaps = 1/324 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M +G PD+ T +I+M + G+ A++ML +E+ G + + + +L C+
Sbjct: 342 MGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGM 401
Query: 249 VGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
A ++ + M K N YN +I K G++ E R+++E+ ++G PD T++
Sbjct: 402 WDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNT 461
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
+I L ++D+A +F + E+G + YN +I + G + E ++ M +
Sbjct: 462 IIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHG 521
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
C ++ +Y LI L K V ++ + EEM+ +GI P+ + + LC G A+
Sbjct: 522 CPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDAL 581
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+ K+ G + Y L+ L G L+L ++ D Y +I+
Sbjct: 582 ELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWH 641
Query: 488 CNIGQLENAVLVMEESLRKGFCPS 511
C + L++A +++++++ G P+
Sbjct: 642 CKVRLLDDASMLLDKAVSGGIVPN 665
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 143/326 (43%), Gaps = 6/326 (1%)
Query: 216 KAIQMLGRL-EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIV 273
+A+ +L ++ F + S N VL L + A L+ M + +V T+ +
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 186
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
+LG+ + +L+ + G PD++ + +I L G + +A + D M GC
Sbjct: 187 ARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGC 246
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
D N +N V+ +G E + M + C P++ TY L+ GL ++R+ +A
Sbjct: 247 AADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYA 306
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+ + + +V + + + + G A +Y+ GC + Y +L+ L
Sbjct: 307 MLGRVPEVNVV----MLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLC 362
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
G+CG + + EM+E G + Y ++ C G ++A ++++ KGF +
Sbjct: 363 KLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQ 422
Query: 514 VYSKLSNKLLASNKLESAYNLFRKIK 539
Y+ + L KL+ A L +++K
Sbjct: 423 GYNGIIYALGKDGKLDEAMRLVQEMK 448
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 113/242 (46%), Gaps = 3/242 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EAM L +K D+ +YN I+ L D ++ ++ +EGV + T +
Sbjct: 439 EAMRLV--QEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNT 496
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
++ + + +G+ + +++ + G D S N ++ LC+ +V + L M K
Sbjct: 497 LIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKG 556
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ N +YN++I+ K G+V + + KE++ +G +PD +T++ LI GL + G A+
Sbjct: 557 IKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAAL 616
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+ + + + PD YN +IS + V D+ S PN T+ ++
Sbjct: 617 NLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNF 676
Query: 383 LK 384
++
Sbjct: 677 VR 678
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 183/415 (44%), Gaps = 33/415 (7%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ LF H +V ++ ++ L R +L M ++G+ P+ T
Sbjct: 166 EALDLF------HQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGT 219
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL----------CQRLHVGAAS 253
++D + G A+ +L ++E+ NVV+W L C A
Sbjct: 220 IVDGMCKMGDTVSALNLLRKMEEV----SHIKPNVVIWPLERRTCMINGFCSSGRWSEAQ 275
Query: 254 SLFNSM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
L M + K+ +V+TYN +I+ + K G+ E E + E++ G P ++T+S +I+G
Sbjct: 276 QLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDG 335
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
+ R+D A +F M KGC PD +N +I+ Y D+ +K M+ N
Sbjct: 336 FCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVAN 395
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
TYT LI G + + A ++ +EM+ G+ P+ T + L+ LC G A+ M+K
Sbjct: 396 TITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFK 455
Query: 432 KARKV-----------GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
+K G + + Y +L+ L GK +L+ EM G D Y
Sbjct: 456 AMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 515
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
VI GLC +L+ A + + K F P+ + ++ L N + +++ LF
Sbjct: 516 NSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 570
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 191/398 (47%), Gaps = 20/398 (5%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
P+V K V+V+ +GR D + ++ M V + + +I+M F ++
Sbjct: 76 PSVIDFCKLMGVVVR-MGR---LDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPF 131
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISG 276
A+ G++ G + + +L LC + A LF+ M NV+T+ +++G
Sbjct: 132 ALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCKP---NVVTFTTLMNG 188
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE-KGCGP 335
+ G+VVE +L ++ +G P+ +T+ +++G+ + G A+ + M+E P
Sbjct: 189 LCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKP 248
Query: 336 DTNAY-----NAVISNYISVGDFDECMKYYKGM-SSYNCEPNMDTYTRLISGLLKSRKVA 389
+ + +I+ + S G + E + + M P++ TY LI+ +K K
Sbjct: 249 NVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFF 308
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
+A E+++EML RGI+PST T +S ++ C AA M+ GC + + L+
Sbjct: 309 EAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLI 368
Query: 450 RRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
+G+ + + D L HEM E+G ++ Y +I G C +G L A +++E +
Sbjct: 369 ---AGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSS 425
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
G CP+ + + L + L + KL+ A +F+ ++ ++ +
Sbjct: 426 GVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 463
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 171/362 (47%), Gaps = 14/362 (3%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRR-KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
++ ++ DV +YN ++ A + KFF+ + +M G+ P T S ++D F +
Sbjct: 282 LERKKISPDVVTYNALINAFVKEGKFFEAE-ELYDEMLPRGIIPSTITYSSMIDGFCKQN 340
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYN 271
++ A M + G D + N ++ C+ V L + M + ++ N +TY
Sbjct: 341 RLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYT 400
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE- 330
+I G+ ++G + + +L+E+V+ G P+ +T + L++GL G++ DA+E+F M++
Sbjct: 401 TLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKS 460
Query: 331 ----------KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
G PD YN +IS I+ G F E + Y+ M P+ TY +I
Sbjct: 461 KMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIH 520
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
GL K ++ +A ++F+ M + P+ T T+ + C G + ++ + + G
Sbjct: 521 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 580
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+ Y L+ G LD++ EM SG D ++ GL + +L+ AV ++
Sbjct: 581 NAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAML 640
Query: 501 EE 502
E+
Sbjct: 641 ED 642
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 138/282 (48%), Gaps = 14/282 (4%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
+F+ A K + D+ ++N ++ R K D +L +M + G+ + T + ++
Sbjct: 348 MFYLMATK--GCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHG 405
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL--- 264
F + G + A +L + G+ + + N +L LC + A +F +M+ +
Sbjct: 406 FCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDID 465
Query: 265 ----FN-----VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
FN V TYNI+ISG G+ +E E + +E+ G PD++T++ +I GL +
Sbjct: 466 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQ 525
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
R+D+A ++FD+M K P+ + +I+ Y G D+ ++ + M N TY
Sbjct: 526 SRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITY 585
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
LI G K + AL++F+EM+ G+ P T TI + L L
Sbjct: 586 ITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGL 627
>gi|449494995|ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 488
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 198/418 (47%), Gaps = 6/418 (1%)
Query: 113 KGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKA 172
+ +++D + N ++ LS D+V K++ R ++ + F WA Y++++
Sbjct: 58 QSLLQDPVCN-SIQLSHDLVYKLLQRFKDDWKSALGVFRWAESLSGFKHTPDLYDILIDT 116
Query: 173 LGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
LG+ K M +L +M KE L+T++ M F AGQ A+++ LE +GL+ +
Sbjct: 117 LGKTKQLVKMRGMLEEM-KEARLVTLDTVAKAMRRFAGAGQWENAVRIFDDLETYGLEKN 175
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
ES+NV+L LC+ V A ++ +K + N T+N+ I GW K+ ++ E L+E
Sbjct: 176 TESMNVLLDTLCKEKKVEKARQMYLELKSHIAPNANTFNMFIHGWCKVNKIDEAHWTLEE 235
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+ G P +++S +I + E+ D M +GC + Y ++ + +
Sbjct: 236 MKGYGHRPCVISYSTIILFYCHRCNFNKVYELLDEMDAQGCPANVITYTTIMCSLTKSEE 295
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE-EMLDRGIVPSTGTIT 411
F+E ++ + M S EP+ Y LI L ++ KV +A+ VFE EM + ++P+T T
Sbjct: 296 FEEALQIAERMKSAGYEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYN 355
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKV-GCKLSLTAYKLLLRRLSGFGKCGM-LLDLWHEMQ 469
S + C AM + ++ +K CK + Y LL+ GK L +L EM
Sbjct: 356 SMIAMYCRRAREEKAMKLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNLLDEMI 415
Query: 470 ESGYPS-DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
+ S D Y +I GLC + + A + E+ + + P L L ++ N
Sbjct: 416 NKHHLSLDISTYSLLIHGLCRANKCDWAYQLFEKMISQDIKPRYLTCQLLLDEFKQKN 473
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 183/396 (46%), Gaps = 18/396 (4%)
Query: 154 IKHPNVAKDVKSYNVIVKALGR-------RKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
+K D +YNV++ L + R FFD +M + G PD+ T +I++
Sbjct: 187 MKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFD-------EMLEAGCKPDVYTYNILIS 239
Query: 207 SFIRAGQVYKAIQMLGRLEDF-GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VL 264
F +AG A L + G D + ++ L + + A +L +
Sbjct: 240 GFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCT 299
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+ TYN +++G K+G++ E +L++IV G +PD +T++ LI+GLG+ R +A ++
Sbjct: 300 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 359
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F M +G DT Y A+I + G + YK M+S+ C P++ T + +I GL K
Sbjct: 360 FKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 419
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+ ++ A+ +F+ M RG+ P+ ++ + LC A+ M + +K C
Sbjct: 420 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 479
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y +L+ L G + EM E+G D Y +I+G C G + A V ++ +
Sbjct: 480 YNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDD-M 538
Query: 505 RKGFCPSRLV-YSKLSNKLLASNKLESAYNLFRKIK 539
C + +V Y L + L +L A F+ +K
Sbjct: 539 SSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMK 574
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 180/400 (45%), Gaps = 4/400 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA LF A++ +A D Y +++ L + +V M G PD+ TLS
Sbjct: 74 EAYKLFKEMALR--GLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLST 131
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++D +AG++ A+++ +E GL + + ++ LC+ + A + MK
Sbjct: 132 MIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 191
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ +TYN++I G K G V E++ G PD T++ LI G +AG D A
Sbjct: 192 CTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAS 251
Query: 323 E-VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+ GC D + Y A++ +E + + +++ C P + TY L++G
Sbjct: 252 HSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNG 311
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L K ++ +A+++ +++D G P T TS ++ L A ++K+ G L
Sbjct: 312 LCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALD 371
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
Y L+R L GK ++ M G D +I GL G++ AV + +
Sbjct: 372 TVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 431
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
+G P+ +VYS L + L + K++ A + ++K A
Sbjct: 432 SMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 471
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 142/309 (45%), Gaps = 36/309 (11%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+ TYN +++G K+G++ E +L++IV G +PD +T++ LI+GLG+ R +A ++F
Sbjct: 20 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 79
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
M +G DT Y A+I + G + YK M+S+ C P++ T + +I GL K+
Sbjct: 80 KEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 139
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
++ A+ +F+ M RG+ P+ ++ + LC A+ M + +K C Y
Sbjct: 140 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 199
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG-------------- 491
+L+ L G + EM E+G D Y +I+G C G
Sbjct: 200 NVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETT 259
Query: 492 ----------------------QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
++E AV +ME+ G P+ Y+ L N L +LE
Sbjct: 260 INGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLE 319
Query: 530 SAYNLFRKI 538
A +L RKI
Sbjct: 320 EAIDLLRKI 328
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 110/223 (49%), Gaps = 2/223 (0%)
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
+I++A+ + + + GC P YNA+++ +G +E + + + C P++ TYT
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
LI GL K ++ +A ++F+EM RG+ T T+ + L G A +YK
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
GC + ++ LS G+ G + ++ M+ G + +Y +I GLC +++ A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180
Query: 497 VLVMEESLRKGFC-PSRLVYSKLSNKLLASNKLESAYNLFRKI 538
L M ++K FC P + Y+ L + L S +E+A F ++
Sbjct: 181 -LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEM 222
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 88/189 (46%)
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
+E + + +++ C P + TY L++GL K ++ +A+++ +++D G P T TS
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
++ L A ++K+ G L Y L+R L GK ++ M G
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
D +I GL G++ AV + + +G P+ +VYS L + L + K++ A
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181
Query: 533 NLFRKIKIA 541
+ ++K A
Sbjct: 182 EMLAQMKKA 190
>gi|357440039|ref|XP_003590297.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479345|gb|AES60548.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 661
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 194/411 (47%), Gaps = 13/411 (3%)
Query: 112 GKGVIEDALWN-------VN-VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDV 163
GKG ED + VN + LS +++ +++ R ++ + F WA H N
Sbjct: 61 GKGNSEDDILQSLISDEGVNGIHLSENLINRLLFRYKDDWKSALAIFRWAGSHSNFKHSQ 120
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+SY+++V LGR K D M +L +M +E + L T++ VM F+ A Q A+++
Sbjct: 121 QSYDMMVDILGRMKAMDKMREILEEMRQESL-ITLNTIAKVMRRFVGARQWKDAVRIFDD 179
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQV 283
L+ GL+ + ES+NV+L LC+ V A ++ +K + N T+NI+I GW + +V
Sbjct: 180 LQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLELKHYIAPNAHTFNILIHGWCNIRRV 239
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E ++E+ G P +++S +I+ + D ++ D M+ + C P+ Y +
Sbjct: 240 EEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTI 299
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG- 402
+ F+E ++ + M++ C P+ + LI L ++ ++ DA VF+ + +
Sbjct: 300 MCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKAS 359
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG-CKLSLTAYKLLLRRLSGFGKCGML 461
+ P+T T S + C Y A + K+ K G CK + Y L++ +
Sbjct: 360 VAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTW 419
Query: 462 L-DLWHEMQESGYPS-DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
L D+ ++M + D Y +I GL + + A + EE + P
Sbjct: 420 LNDILNDMVNKYHIGLDLSTYTLLIHGLYRADRCKWAFDLFEEMADQDIVP 470
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 151/333 (45%), Gaps = 44/333 (13%)
Query: 127 LSLDVVGKVVNR--GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCN 184
++L+ + KV+ R G + V F+ ++ + K+ +S NV++ L + KF +
Sbjct: 152 ITLNTIAKVMRRFVGARQWKDAVRIFD-DLQFLGLEKNTESMNVLLDTLCKEKFVEQARE 210
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ ++ K + P+ T +I++ + +V +A + ++ +G + S + ++ C C
Sbjct: 211 IYLEL-KHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYC 269
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
Q + L + M+ + NV+TY ++ +K + E +V++ + A G PD+L
Sbjct: 270 QEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTL 329
Query: 304 TFSFLIEGLGRAGRIDDAIEVFD-TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
F+ LI LGRAGRIDDA VF M + P+T+ YN++IS + + K
Sbjct: 330 FFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKE 389
Query: 363 MSSYN-CEPN-------------------------------------MDTYTRLISGLLK 384
M C+P+ + TYT LI GL +
Sbjct: 390 MEKSGLCKPDIQTYHPLIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYR 449
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+ + A ++FEEM D+ IVP T L+ +
Sbjct: 450 ADRCKWAFDLFEEMADQDIVPRYKTCRLLLDEV 482
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/284 (18%), Positives = 118/284 (41%), Gaps = 9/284 (3%)
Query: 255 LFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
+ M+ + L + T V+ + Q + R+ ++ G ++ + + L++ L +
Sbjct: 142 ILEEMRQESLITLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCK 201
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
++ A E++ +K P+ + +N +I + ++ +E + M Y C P + +
Sbjct: 202 EKFVEQAREIYLELKHY-IAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVIS 260
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y+ +I + + ++ +EM + P+ T T+ + L A+ + ++
Sbjct: 261 YSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMN 320
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH----EMQESGYPSDGEIYEYVIAGLCNI 490
VGC+ + L+ L G+ G + D H M ++ + Y +I+ C
Sbjct: 321 AVGCRPDTLFFNSLIYTL---GRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYY 377
Query: 491 GQLENAVLVMEESLRKGFC-PSRLVYSKLSNKLLASNKLESAYN 533
Q E A +++E + G C P Y L ++++ N
Sbjct: 378 AQEERAFGILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTWLN 421
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 177/380 (46%), Gaps = 14/380 (3%)
Query: 167 NVIVKALGRRK----FFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
N ++ A R+K +D N L + +PD T S +++ F +A +A ++L
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLC----SPDSITYSTLINGFCKARDFQQAYRLLD 57
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQ 282
+E G+ N ++ LC V +A + M+ +V+TY I++ K +
Sbjct: 58 EMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSAR 117
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ + +L++++ G +P+ +T++ LI G + G +D+A+ +F+ M E C PD YN
Sbjct: 118 ISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNI 177
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I Y + K + M Y CEPN TY L+ L+KS K DA + + ML R
Sbjct: 178 LIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 237
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
PS T ++ C G A +++ GC + Y ++ +SG + +
Sbjct: 238 CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIM---ISGACRANRID 294
Query: 463 D---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
D L M E+G P D Y +++GLC Q++ A V E G+ + S L
Sbjct: 295 DARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLI 354
Query: 520 NKLLASNKLESAYNLFRKIK 539
+ L S +L+ A L R+++
Sbjct: 355 DGLCKSRRLDDAEKLLREME 374
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 175/374 (46%), Gaps = 2/374 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN I+K L D DM + P + T +I++D+ ++ ++ A +L +
Sbjct: 71 YNTIIKGLCDNGRVDSALVHYRDMQRHCA-PSVITYTILVDALCKSARISDASLILEDMI 129
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVV 284
+ G + + N ++ C+ ++ A LFN M + +V TYNI+I G+ K +
Sbjct: 130 EAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQ 189
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ ++L+E+V G P+ +T++ L++ L ++G+ DA + M + C P +N +I
Sbjct: 190 DGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMI 249
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ VG D + ++ M+ C P++ TY +ISG ++ ++ DA ++ E M + G
Sbjct: 250 DMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCP 309
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P T S + LC A +Y+ R G L + L+ L + L
Sbjct: 310 PDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKL 369
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
EM+ +G D Y +I G C QL+ ++ E L KG P+ + YS + +KL
Sbjct: 370 LREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCK 429
Query: 525 SNKLESAYNLFRKI 538
S ++ L + +
Sbjct: 430 SARVRDGCMLLKTM 443
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 121/241 (50%), Gaps = 3/241 (1%)
Query: 165 SYNVIVKALGRR-KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+YN ++ +L + K+ D N+ M + P T ++++D F + GQ+ A ++
Sbjct: 209 TYNTLMDSLVKSGKYIDAF-NLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQL 267
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQ 282
+ D G D + N+++ C+ + A L M + +V+TYN ++SG K Q
Sbjct: 268 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 327
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V E V + + G+ D +T S LI+GL ++ R+DDA ++ M+ G PD AY
Sbjct: 328 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 387
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I + D+ + ++ M C P + TY+ +I L KS +V D + + ML+RG
Sbjct: 388 LIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447
Query: 403 I 403
+
Sbjct: 448 V 448
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 171/378 (45%), Gaps = 1/378 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ DV +YN I+ AL + + D VL M K G P+ T + ++ + +G+ AI
Sbjct: 234 LSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAI 293
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+ R+ G++ D + N ++ LC+ A +F+SM K N TY ++ G+
Sbjct: 294 GVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGY 353
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G +V+M +L +V G PD F+ LI + G++DDA+ +F M+ +G PDT
Sbjct: 354 ATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDT 413
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y V+ VG D+ M + + S P+ + LI GL K A E+ E
Sbjct: 414 VTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVE 473
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ RGI P+ + L LC G A ++ +V + + Y L+ GK
Sbjct: 474 MIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGK 533
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L M G + Y +I G C G++E+A + + KG P + YS
Sbjct: 534 VDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYST 593
Query: 518 LSNKLLASNKLESAYNLF 535
+ L + + +A L+
Sbjct: 594 ILQGLFQARRTAAAKELY 611
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 163/363 (44%), Gaps = 18/363 (4%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
+A+ V P+L T S+V+D R G + A LGR+ G +A + + +L LC +
Sbjct: 82 VARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKR 141
Query: 249 VGAASSLFNSMKGKVLF----NVMTYNIVISGWSKLGQVVEMERVLKEIVAE-----GFS 299
A + +++ + NV +Y I++ G + + +L ++ G+
Sbjct: 142 TSEAMDI--ALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYP 199
Query: 300 PDSLTFSFLIEGLGRAGR-IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
PD ++++ +I GL R GR +D A +FD M ++G PD YN++IS D+
Sbjct: 200 PDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAV 259
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
M PN T+ L+ G S K DA+ VF+ M G+ P T + + LC
Sbjct: 260 VLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLC 319
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH---EMQESGYPS 475
G A ++ K G K + Y LL G+ G L+ + H M +G
Sbjct: 320 KNGRSMEARKIFDSMVKRGHKPNSATYGTLLH---GYATEGSLVKMHHLLDMMVRNGIQP 376
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
D I+ +I G++++A+L+ + R+G P + Y + + L K++ A F
Sbjct: 377 DHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQF 436
Query: 536 RKI 538
++
Sbjct: 437 GRL 439
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 167/381 (43%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D +N+++ + D + S M ++G+NPD T IVMD+ G+V A+
Sbjct: 374 IQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAM 433
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
GRL GL DA ++ LC R A L M G+ + N + +N +++
Sbjct: 434 AQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHL 493
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G V + + +V D +T++ LI+G G++D+A ++ + M G P+
Sbjct: 494 CKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNE 553
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I+ Y G ++ ++ M+S P + TY+ ++ GL ++R+ A A E++
Sbjct: 554 VTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLW 613
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ GI GT L LC A+ +++ + L + +++ L G+
Sbjct: 614 MIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGR 673
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
DL+ + G + Y ++ L G LE + + G + + +
Sbjct: 674 HDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNA 733
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L KLL ++ A KI
Sbjct: 734 LVGKLLQKGEVRKAGVYLSKI 754
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 161/400 (40%), Gaps = 50/400 (12%)
Query: 159 VAKDVKSYNVIVKAL---GR----RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
V DV +YN ++ L GR RK FD M K G P+ T ++ +
Sbjct: 304 VEPDVFTYNTLMGYLCKNGRSMEARKIFD-------SMVKRGHKPNSATYGTLLHGYATE 356
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTY 270
G + K +L + G++ D N+++ + V A LF+ M+ + L + +TY
Sbjct: 357 GSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTY 416
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL-----------------G 313
IV+ +G+V + +++EG +PD++ F LI GL G
Sbjct: 417 GIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIG 476
Query: 314 RA------------------GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
R G + A +FD M D YN +I Y G DE
Sbjct: 477 RGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDE 536
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
K +GM +PN TY +I+G K+ ++ DA +F +M +G+ P T ++ L+
Sbjct: 537 AAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQ 596
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
L AA +Y K G K + Y ++L L L ++ + +
Sbjct: 597 GLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHL 656
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
+ + +I L G+ + A + L +G P+ + Y
Sbjct: 657 ENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTY 696
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 101/205 (49%), Gaps = 3/205 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ + + ++ MA +GVNP + T S ++ +A + A ++ +
Sbjct: 555 TYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWM 614
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNV--MTYNIVISGWSKLGQ 282
G+KFD + N++L LCQ A +F ++ + F++ T+NI+I K G+
Sbjct: 615 IKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLY-LIDFHLENRTFNIMIDALLKGGR 673
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
E + + ++A G P+ +T+ +++ L G +++ ++F ++++ GC ++ NA
Sbjct: 674 HDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNA 733
Query: 343 VISNYISVGDFDECMKYYKGMSSYN 367
++ + G+ + Y + N
Sbjct: 734 LVGKLLQKGEVRKAGVYLSKIDENN 758
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 138/565 (24%), Positives = 246/565 (43%), Gaps = 37/565 (6%)
Query: 1 MAFLSRFYRTRYPLSSLSSSFSLFSFSTSVRSNLSYNELLSN--QKKNMSSLDEHHVLKE 58
+ LS F R P ++L++ L SF S+N LL + + S D
Sbjct: 88 LVVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADA------ 141
Query: 59 LSDLFQISSHNSF-----PNV--YKESRSNSVKRIDSSRAVDEF-------LLPEERLRG 104
F SH +F PN+ Y + R D RAV F L P+
Sbjct: 142 ---FFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYS 198
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSG--------EAMVLFFNWAIKH 156
+ +++AL+ ++ S +V V L G E + + ++
Sbjct: 199 TLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRD 258
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
P + ++ +YNV++ L + F +V M PD+ T ++ R+ V
Sbjct: 259 PGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDS 318
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISG 276
A ++ + GL D N +L C VG A ++SM + NV +YNI++ G
Sbjct: 319 AARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKG 378
Query: 277 WSKLGQVVEMERVLKEIVA--EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G +V+ L E++ + SPD +TFS +I GL G + ++++ + + G
Sbjct: 379 LFD-GGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKE 437
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
D +Y+++IS G D+ +K Y+ +S + +PN Y LI+G ++ K +DA+ V
Sbjct: 438 LDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRV 497
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ +M + P+T T + + LC A ++ + GC L + Y L+R L
Sbjct: 498 YSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCR 557
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK-GFCPSRL 513
K L LW+++ + G +D ++ +I GLC+ G+++ A ++ E K CP+ +
Sbjct: 558 DKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVV 617
Query: 514 VYSKLSNKLLASNKLESAYNLFRKI 538
Y+ L + + + A +L+ I
Sbjct: 618 TYNTLMDGFYETGCFDKAASLWMAI 642
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 174/355 (49%), Gaps = 8/355 (2%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED--FGLKF--DAESLNVVLWCLCQRLH 248
G NP + + + ++D+F+RA + A L FG + + ++ N++L LC R
Sbjct: 115 GCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGD 174
Query: 249 VGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ A +LF+S++ + L + +TY+ ++SG+ K ++ +L E+ + PD++ ++
Sbjct: 175 LDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNA 234
Query: 308 LIEGLGRAGRIDDAIEVFDTM-KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
L+ G R G + A+ V++ + ++ G P+ YN ++ +G F E ++ M +
Sbjct: 235 LLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVAN 294
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
N +P+M TY +I GL +S V A V+ EM+ G+VP S L+ C G A
Sbjct: 295 NHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEA 354
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ-ESGYPSDGEIYEYVIA 485
+ G + ++T+Y ++L+ L G DLW ++ + D + +I
Sbjct: 355 WKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIH 413
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
GLC G ++ ++EE+ G YS + + L +L+ A L+ KI +
Sbjct: 414 GLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISM 468
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 119/263 (45%), Gaps = 2/263 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D SY+ ++ L + D + ++ + P+ + +++ F +A + AI++
Sbjct: 439 DEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVY 498
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++ + + N ++ LC+ AS M K + +V TY +I G +
Sbjct: 499 SQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRD 558
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG-CGPDTNA 339
++ + +I+ +G D + + LI GL AG++D+A ++ MKEK C P+
Sbjct: 559 KKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVT 618
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YN ++ + G FD+ + + P++ +Y I GL + + +++ EML
Sbjct: 619 YNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEML 678
Query: 400 DRGIVPSTGTITSFLEPLCSYGP 422
GI+P+ T + + YGP
Sbjct: 679 ASGIIPTAITWNILVRAVIKYGP 701
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 139/304 (45%), Gaps = 2/304 (0%)
Query: 155 KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV 214
K +++ D+ +++ ++ L + F + +L + G D + S ++ + G++
Sbjct: 397 KDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRL 456
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIV 273
A+++ ++ K ++ N ++ CQ A +++ M + +TYN +
Sbjct: 457 DDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTL 516
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
I G K + +E R +E++ +G D T+ LI GL R +ID A+ +++ + +KG
Sbjct: 517 IHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGL 576
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN-CEPNMDTYTRLISGLLKSRKVADAL 392
D +N +I S G DE + M N C PN+ TY L+ G ++ A
Sbjct: 577 QTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAA 636
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
++ +L+ G+VP + + ++ LCS + + + G + + +L+R +
Sbjct: 637 SLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAV 696
Query: 453 SGFG 456
+G
Sbjct: 697 IKYG 700
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 134/319 (42%), Gaps = 42/319 (13%)
Query: 230 KFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN--VMTYNIVISGWSKLGQVVEME 287
+F + VVL + L AA + F + + N V ++N ++ + + + + +
Sbjct: 81 RFSESAALVVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDAD 140
Query: 288 RVLKEIVAEGF----SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ F +P+ T++ ++ L G +D A+ +FD+++ +G PD Y+ +
Sbjct: 141 AFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTL 200
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML-DRG 402
+S ++ D + M SY +P+ Y L+ G ++ + A+ V+E+++ D G
Sbjct: 201 MSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPG 260
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P+ T L+ LC G M+K+A
Sbjct: 261 ASPNLATYNVMLDGLCKLG-------MFKEAG---------------------------- 285
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
D+W M + + D Y +I GLC +++A V E ++ G P ++Y+ L
Sbjct: 286 DVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGF 345
Query: 523 LASNKLESAYNLFRKIKIA 541
+ ++ A+ + + ++
Sbjct: 346 CHAGRVGEAWKFWDSMSVS 364
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 80/159 (50%), Gaps = 2/159 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y +++ L R K D + + + +G+ D+ +I++ AG+V +A Q+L
Sbjct: 544 DVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLL 603
Query: 222 GRL-EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS-MKGKVLFNVMTYNIVISGWSK 279
+ E + + N ++ + A+SL+ + ++ ++ ++++YN I G
Sbjct: 604 SEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCS 663
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+ E ++L E++A G P ++T++ L+ + + G I
Sbjct: 664 CNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPI 702
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 178/375 (47%), Gaps = 2/375 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ AL + D V M GV PD T ++ + SF G+ + A+++L L
Sbjct: 12 AYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSL 71
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
+ G + V+ L H A LF+ M + +F +V T+N V+ + G +
Sbjct: 72 PERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDI 131
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+E +L +++ G S + T + I GL GR+++A+ + ++M + PD YN +
Sbjct: 132 MESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAPDVVTYNTL 190
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ E +Y + M + C P+ TY +I G K + +A E+ ++ + +G
Sbjct: 191 MRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGF 250
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
VP T S + LC+ G A+ ++ +A+ K L Y L++ L G L
Sbjct: 251 VPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQ 310
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ +EM E G D Y VI GLC +G + +A +VM +++ KG+ P ++ + +
Sbjct: 311 VMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYC 370
Query: 524 ASNKLESAYNLFRKI 538
KL+SA L ++
Sbjct: 371 KRLKLDSALQLVERM 385
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 172/373 (46%), Gaps = 1/373 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ +R +L D +G PD T +++ G V +A+++
Sbjct: 221 TYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEA 280
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ LK D N ++ LC++ + A + N M + ++ TYNIVI+G K+G +
Sbjct: 281 QAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNI 340
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ V+ + + +G+ PD TF+ +I+G + ++D A+++ + M G PD YN+V
Sbjct: 341 SDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSV 400
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
++ G E + ++ M C PN TY LI K ++ +A V M G+
Sbjct: 401 LNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGL 460
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
VP T + + + C G A ++++K + G + + +L+ S M
Sbjct: 461 VPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEK 520
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
++ EM GY D Y ++ G C ++ A + + E + KGF PS + ++ N L
Sbjct: 521 IFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLA 580
Query: 524 ASNKLESAYNLFR 536
++++ A +
Sbjct: 581 MNHRVSEAVAIIH 593
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 179/382 (46%), Gaps = 2/382 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+V DV ++N ++ AL ++ +L+ + K G++ + T +I + G++ +A
Sbjct: 110 DVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEA 169
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG-AASSLFNSMKGKVLFNVMTYNIVISG 276
+ ++ ++ + + D + N ++ LC+ V AA L M + + TYN +I G
Sbjct: 170 VALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDG 228
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K + E +LK+ + +GF PD +T+ LI GL G ++ A+E+F+ + K PD
Sbjct: 229 YCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPD 288
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN+++ G ++ M C P++ TY +I+GL K ++DA V
Sbjct: 289 LVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMN 348
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+ + +G +P T + ++ C +A+ + ++ G Y +L L G
Sbjct: 349 DAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAG 408
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K + + + EM G + Y +I C I QLE A V+ + G P + ++
Sbjct: 409 KAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFN 468
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
L + + L+ AY LF+K+
Sbjct: 469 TLIHGFCRNGDLDGAYLLFQKL 490
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 165/375 (44%), Gaps = 1/375 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+A DV +YN +++ L + L M +G PD T + ++D + + + +A
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
++L G D + ++ LC V A LFN + K L +++ YN ++ G
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G ++ +V+ E+V +G PD T++ +I GL + G I DA V + KG PD
Sbjct: 300 CRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDV 359
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+N +I Y D ++ + M Y P+ TY +++GL K+ K + E FEE
Sbjct: 360 FTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEE 419
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ +G P+ T +E C A + + + G ++ L+ G
Sbjct: 420 MILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGD 479
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L+ ++ E GY + + + +I + ++ A + E + KG+ P Y
Sbjct: 480 LDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRV 539
Query: 518 LSNKLLASNKLESAY 532
L + + ++ AY
Sbjct: 540 LVDGSCKAANVDRAY 554
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 100/277 (36%), Gaps = 34/277 (12%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
G P + ++ +++ L D A +V+ M G PD + I ++ G
Sbjct: 5 GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
++ + + C+ Y ++ GL DA +F+EML R + P T + L
Sbjct: 65 LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124
Query: 417 LCSYGPPHAAMMMYKKARKVG-------CKL---------------------------SL 442
LC G + + K K G C + +
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAPDV 184
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L+R L K M G D Y +I G C L+ A ++++
Sbjct: 185 VTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKD 244
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ KGF P R+ Y L N L A +E A LF + +
Sbjct: 245 AIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQ 281
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 72/176 (40%)
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M + C P Y ++ L+ + A +V+ ML G+ P T T ++ C G
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
PH A+ + + + GC + AY ++R L G L+ EM D +
Sbjct: 61 PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
V+ LC G + + ++ + L++G ++ + L +LE A L +
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM 176
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 181/379 (47%), Gaps = 1/379 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +K+Y+ ++ ALG+R+ + + +L +M G+ P++ T +I + RAG++ +A
Sbjct: 223 IKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAY 282
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
+L R++D G D + V++ LC + A LF MK + +TY ++ +
Sbjct: 283 GILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKF 342
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
S G + ++ E+ A+G+ PD +TF+ LI+ L + G++D+A D MK++G P+
Sbjct: 343 SDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNL 402
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+ YN +I + + DE ++ + M S E TY I KS + A++ FE+
Sbjct: 403 HTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEK 462
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M GIVP+ + L L G A + +K G Y +L+R G+
Sbjct: 463 MKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGR 522
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+ L EM+E+G + I +I L +++ A + + P+ + Y+
Sbjct: 523 VDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNT 582
Query: 518 LSNKLLASNKLESAYNLFR 536
L L +++ A LF+
Sbjct: 583 LLAGLGKEGRVQEATALFK 601
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 168/342 (49%), Gaps = 2/342 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV ++ +++ AL + D L M K+GV P+L T + ++ +R ++ +A+++
Sbjct: 366 DVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELF 425
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+E GL+ A + + + + G A F MK ++ N++ N + ++
Sbjct: 426 NSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQ 485
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ E + + G +PD++T++ L+ G+AGR+DDAI++ M+E GC P+
Sbjct: 486 GRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVII 545
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N++I DE K ++ M P + TY L++GL K +V +A +F+ M+
Sbjct: 546 NSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIA 605
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
P+T + + L+ LC G A+ M + ++ C + Y ++ L +
Sbjct: 606 DDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNY 665
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
L+H+M++ YP D ++ G+ G++E+A V +E
Sbjct: 666 AFWLFHQMKKVIYP-DYVTLCTLLPGVIKDGRIEDAFRVAKE 706
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 161/321 (50%), Gaps = 2/321 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +++YN ++ L + + + + M G PD+ T ++ +D+ ++G++ +
Sbjct: 784 ITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELF 843
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF-NSMKGKVLFNVMTYNIVISGW 277
+ + G K + + N+V++ L + + A L+ + M G TY +I G
Sbjct: 844 DLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGL 903
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
KLG++ E ++ +E++ G P+ ++ L+ G G+ G ++ A E+F M ++G PD
Sbjct: 904 LKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDL 963
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+Y+ ++ VG D+ + Y++ + +P++ Y +I+GL +S++V +AL +F+E
Sbjct: 964 KSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDE 1023
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M +RGI P T + + L G A MY++ + G + ++ Y L+R S G
Sbjct: 1024 MRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGN 1083
Query: 458 CGMLLDLWHEMQESG-YPSDG 477
++ +M G P+ G
Sbjct: 1084 PDRAYAVYKKMMVGGCRPNTG 1104
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 186/422 (44%), Gaps = 41/422 (9%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N DV +YN ++ L + ++ + M K+ + PD TL ++ I+ G++ A
Sbjct: 642 NCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM-KKVIYPDYVTLCTLLPGVIKDGRIEDA 700
Query: 218 IQMLGRL-------------EDF--GLKFDAESLNVVLWC-------LCQRLHVGAASSL 255
++ ED G+ +AE +L+ +C+ V
Sbjct: 701 FRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVK 760
Query: 256 FNSMKGKVL--FNVM--------------TYNIVISGWSKLGQVVEME-RVLKEIVAEGF 298
F GK + +NV YN +I G K ++ EM + ++ G
Sbjct: 761 FLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLK-ARLTEMAWGLFYKMKNAGC 819
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
+PD T++ ++ LG++G+I + ++++ M +GC P+T +N VI + D+ +
Sbjct: 820 TPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAID 879
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
Y + S + P TY LI GLLK ++ +A + FEEMLD G +P+ +
Sbjct: 880 LYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFG 939
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
G A ++++ K G + L +Y +++ L GK L + E++ SG D
Sbjct: 940 KQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLV 999
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y +I GL ++E A+ + +E +G P Y+ L L + +E A ++ ++
Sbjct: 1000 CYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEEL 1059
Query: 539 KI 540
++
Sbjct: 1060 QL 1061
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 180/422 (42%), Gaps = 36/422 (8%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA---- 217
++ ++ + ++ LGR D +L M G PD+ T ++++D+ AG++ A
Sbjct: 261 NIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELF 320
Query: 218 ---------------IQMLGRLEDFG-----LKF-----------DAESLNVVLWCLCQR 246
I +L + D G +F D + +++ LC+
Sbjct: 321 LKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKV 380
Query: 247 LHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
V A + MK + V N+ TYN +I G +L ++ E + + + G + T+
Sbjct: 381 GKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTY 440
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
I+ G++G AI+ F+ MK G P+ A NA + + G +E +++ G+
Sbjct: 441 ILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKK 500
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
P+ TY L+ K+ +V DA+++ EM + G P I S ++ L
Sbjct: 501 CGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDE 560
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A M+++ +++ ++ Y LL L G+ L+ M P + + ++
Sbjct: 561 AWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLD 620
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQND 545
LC G+++ A+ ++ P L Y+ + L+ N++ A+ LF ++K D
Sbjct: 621 CLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIYPD 680
Query: 546 YA 547
Y
Sbjct: 681 YV 682
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 135/291 (46%), Gaps = 1/291 (0%)
Query: 252 ASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A LF MK +V TYN+ + K G++ E+ + +E++ G P+++T + +I
Sbjct: 807 AWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIF 866
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
GL ++ +D AI+++ + P Y +I + +G +E ++++ M Y C P
Sbjct: 867 GLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMP 926
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
N Y L++G K V A E+F M+ GI P + + ++ LC G A+ +
Sbjct: 927 NCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYF 986
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
++ + G L Y L++ L + L L+ EM+ G D Y +I L
Sbjct: 987 EELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIA 1046
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
G +E A + EE KG P+ Y+ L S + AY +++K+ +
Sbjct: 1047 GMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVG 1097
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 138/298 (46%), Gaps = 36/298 (12%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
+ +K+ DV +YN+ + ALG+ + ++ +M G P+ T +IV+ +++
Sbjct: 812 YKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKS 871
Query: 212 GQVYKAIQM-------------------------LGRLE----------DFGLKFDAESL 236
+ KAI + LGRLE D+G +
Sbjct: 872 NSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLY 931
Query: 237 NVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
N+++ ++ V A LF M K + ++ +Y+I++ +G+V + +E+
Sbjct: 932 NILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKL 991
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
G PD + ++ +I GLGR+ R+++A+ +FD M+ +G PD YNA+I N G +E
Sbjct: 992 SGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEE 1051
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
K Y+ + EPN+ TY LI G S A V+++M+ G P+TGT
Sbjct: 1052 AGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 169/387 (43%), Gaps = 2/387 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K +A V +YN ++ LG+ + M + P+ + + ++D + G+
Sbjct: 568 MKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGE 627
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
V A++ML R+ + D + N V++ L + V A LF+ MK + + +T +
Sbjct: 628 VDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIYPDYVTLCTL 687
Query: 274 ISGWSKLGQVVEMERVLKEIVAE-GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+ G K G++ + RV KE V G D + L+ G+ I +I +++
Sbjct: 688 LPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNT 747
Query: 333 CGPDTNAYNAVISNYISVGD-FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
D + ++ G D + K S+ P+++ Y LI GLLK+R A
Sbjct: 748 ICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMA 807
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+F +M + G P T FL+ L G +Y++ GCK + + +++
Sbjct: 808 WGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFG 867
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L +DL++++ + Y +I GL +G+LE A EE L G P+
Sbjct: 868 LVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPN 927
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
+Y+ L N +E+A LFR++
Sbjct: 928 CPLYNILMNGFGKQGDVETACELFRRM 954
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 141/308 (45%), Gaps = 1/308 (0%)
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLK 291
E+ N VL L V +FN M+ +++ ++ TY + G + E L+
Sbjct: 122 TETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALE 181
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
++ GF + ++ LI L ++G +A++V+ M +G P Y+A++
Sbjct: 182 KMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRR 241
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
D + M + M S PN+ T+T I L ++ K+ +A + + M D G P T T
Sbjct: 242 DIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYT 301
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
++ LC+ G + A ++ K + K Y LL + S G + + W EM+
Sbjct: 302 VLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEAD 361
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
GY D + +I LC +G+++ A ++ ++G P+ Y+ L LL N+L+ A
Sbjct: 362 GYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEA 421
Query: 532 YNLFRKIK 539
LF ++
Sbjct: 422 LELFNSME 429
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 177/429 (41%), Gaps = 42/429 (9%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FFN +K +A D +YN++++ G+ D +LS+M + G +P++ ++ ++D+
Sbjct: 494 FFN-GLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTL 552
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNV 267
+A +V +A +M R+++ L + N +L L + V A++LF M N
Sbjct: 553 YKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNT 612
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+++N ++ K G+V ++L + PD LT++ +I GL + R++ A +F
Sbjct: 613 ISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQ 672
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN-------------------- 367
MK K PD ++ I G ++ + K +
Sbjct: 673 MK-KVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEA 731
Query: 368 -----------------CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV-PSTGT 409
CE + L+ L K K DA VF ++ + PS
Sbjct: 732 EIGQSILFAESLVCNTICEDD-SVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEA 790
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
S ++ L A ++ K + GC + Y L L L GK L DL+ EM
Sbjct: 791 YNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEML 850
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
G + + VI GL L+ A+ + + + F P+ Y L + LL +LE
Sbjct: 851 FRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLE 910
Query: 530 SAYNLFRKI 538
A F ++
Sbjct: 911 EAKQFFEEM 919
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 170/345 (49%), Gaps = 1/345 (0%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P + S + S +R G + + +E G++ D SL++++ C C V S+
Sbjct: 60 PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119
Query: 256 FNS-MKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
+ +K + +++T+ +++G G++ ++ + +++ G P+ T++ +I L +
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
+G+ ++A+ M++ GC P+ Y+ +I Y G DE + M S C PN+ T
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYT 239
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
YT L++G K ++ +A+++ +E L +G+VP T T+ + LC G P AA +++
Sbjct: 240 YTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYIC 299
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G ++ Y +LL L G L+ EMQ S + IY +I LC G+++
Sbjct: 300 AHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIK 359
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + + +G P+ Y+ L L + A+ LFRK++
Sbjct: 360 DGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKME 404
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 155/316 (49%), Gaps = 1/316 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ ++ ++ L D + + DM G+ P++ T +++++S ++G+ +A+ L
Sbjct: 132 IVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLK 191
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
++E G + + + ++ C R + A S+F+ M K NV TY +++G+ K+
Sbjct: 192 QMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIE 251
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ E ++L E + +G PD +TF+ +I GL RAGR A ++F + G P+ Y
Sbjct: 252 RIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYG 311
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++ G+ +E ++ M +PN+ YT LI L K K+ D E+F ++D
Sbjct: 312 VLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDE 371
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G+ P+ T T+ + LC G A +++K + GC AY ++++ M
Sbjct: 372 GLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMA 431
Query: 462 LDLWHEMQESGYPSDG 477
L EM G+ +D
Sbjct: 432 RQLVEEMVNRGFSADA 447
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 164/350 (46%), Gaps = 7/350 (2%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
G+ D+ +LSI+++ F +V + +L ++ GL+ + +L LC +
Sbjct: 92 GIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQV 151
Query: 253 SSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
L++ M + L NV TYN++I+ SK G+ E LK++ G P+ + +S LI+G
Sbjct: 152 MMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDG 211
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
G++D+A VFD M KGC P+ Y ++++ Y + +E ++ P+
Sbjct: 212 YCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPD 271
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+ T+T +ISGL ++ + A ++F + G P+ T L+ LC +G A +++
Sbjct: 272 IVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQ 331
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLC 488
+ ++ K +L Y +L+ L KCG + D L+ + + G + Y ++ LC
Sbjct: 332 EMQRSTVKPNLVIYTILIDSLC---KCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALC 388
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G + A + + G P + Y+ + L A L ++
Sbjct: 389 KEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEM 438
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 172/366 (46%), Gaps = 7/366 (1%)
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
V++ + I+ + +D+ S ++++ DF +VLS + K G+ P + T + +++
Sbjct: 81 VVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLN 140
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLF 265
G++ + + + + GL+ + + NV++ L + A M K +
Sbjct: 141 GLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVP 200
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
NV+ Y+ +I G+ GQ+ E V +V++G +P+ T++ L+ G + RI++A+++
Sbjct: 201 NVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLL 260
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D KG PD + +IS G + ++ + ++ PN+ TY L+ GL K
Sbjct: 261 DETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKH 320
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+ +A +F+EM + P+ T ++ LC G ++ + G K ++ Y
Sbjct: 321 GNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTY 380
Query: 446 KLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
L+ L K G++++ L+ +M+E G D Y +I G A ++EE
Sbjct: 381 TALVGALC---KEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEE 437
Query: 503 SLRKGF 508
+ +GF
Sbjct: 438 MVNRGF 443
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 130/277 (46%), Gaps = 2/277 (0%)
Query: 135 VVNRGNLSGEA-MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG 193
++N + SG+A L F ++ +V +Y+ ++ R D +V M +G
Sbjct: 173 IINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKG 232
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAAS 253
P++ T + +M+ + + ++ +A+Q+L GL D + ++ LC+ AA
Sbjct: 233 CTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQ 292
Query: 254 SLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
LF + N+MTY +++ G K G + E + +E+ P+ + ++ LI+ L
Sbjct: 293 QLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSL 352
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
+ G+I D E+F + ++G P+ Y A++ G E K ++ M C P+
Sbjct: 353 CKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDK 412
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
Y +I G L+ + + A ++ EEM++RG T
Sbjct: 413 CAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT 449
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%)
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
DDA+ F M + P ++ + S+ + +G ++ + K + E ++ + + L
Sbjct: 44 DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I+ +V L V ++L G+ PS T T+ L LC G MM+Y G
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ ++ Y +++ LS GK L +M++ G + Y +I G C GQ++ A
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARS 223
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
V + + KG P+ Y+ L N ++E A L
Sbjct: 224 VFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLL 260
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 106/244 (43%), Gaps = 22/244 (9%)
Query: 67 SHNSFPNVYK-ESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNV 125
S PNVY S N +I+ R + L +E LR KG++ D + +
Sbjct: 230 SKGCTPNVYTYTSLMNGYCKIE--RIEEAVQLLDETLR---------KGLVPDIVTFTTI 278
Query: 126 DLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNV 185
L G+ + L F + H + ++ +Y V++ L + + +
Sbjct: 279 ISGLCRAGRPLAAQQL--------FRYICAHGH-TPNIMTYGVLLDGLCKHGNLEEAFAL 329
Query: 186 LSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
+M + V P+L +I++DS + G++ ++ RL D GLK + + ++ LC+
Sbjct: 330 FQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCK 389
Query: 246 RLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
+ A LF M+ + YN++I G+ + ++++E+V GFS D+ T
Sbjct: 390 EGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT 449
Query: 305 FSFL 308
+ L
Sbjct: 450 RALL 453
>gi|225437663|ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Vitis vinifera]
Length = 526
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 202/431 (46%), Gaps = 11/431 (2%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGE---AMVLFFNWAIKHPNVAKDVKSYNVIVKA 172
++ +L + V LS D++ KV+ R S + FFN+ K S + ++
Sbjct: 76 LKQSLKSSGVFLSNDLIDKVLKRVRFSHGNPFQALAFFNYTNKRKGFYHTPFSLDTMLYI 135
Query: 173 LGRRKFFDFMCNVLSDMAKEG---VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGL 229
LGR + FD + +L DM ++ ++P ++ +V+ + V + ++ + +
Sbjct: 136 LGRSRRFDQIWELLVDMRRKDQSLISP--RSVQVVLGRIAKVCSVKQTVESFRKFKKLVP 193
Query: 230 KFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERV 289
+FD N +L LCQ + A ++++S+K ++ T+NI++SGW E E
Sbjct: 194 EFDTACFNALLRTLCQEKSMRDARNVYHSLKHDFRPDLRTFNILLSGWK---SAEEAEGF 250
Query: 290 LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYIS 349
E+ G PD ++++ LI+ + I+ A +V D M+++ PD +Y ++I
Sbjct: 251 FDEMREMGVEPDVVSYNCLIDVYCKGREIERAYKVIDKMRDEQISPDVISYTSIIGGLGL 310
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
VG D+ K M Y C P++ Y I + ++ DA + +EM+ +G+ P+ T
Sbjct: 311 VGQPDKARDVLKEMKEYGCYPDVAAYNAAIRNFCIANRLGDADGLMDEMVGKGLSPNATT 370
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
F + +Y++ +K GC + + L R K M L+LW++M
Sbjct: 371 YNLFFRCFYWSNDLGRSCGLYQRMKKTGCLPNTQSCMFLTRLFRRQEKVEMALELWNDMV 430
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
E G+ S + + + LC++G+L + + KG PS + + ++ + +NK E
Sbjct: 431 EKGFGSYILVSDVLFDMLCDMGKLVEVEKCCLQMIEKGHKPSNVSFRRIKVLMELANKHE 490
Query: 530 SAYNLFRKIKI 540
+ NL K+ +
Sbjct: 491 ALQNLTEKMAM 501
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 198/446 (44%), Gaps = 39/446 (8%)
Query: 130 DVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRK-FFDFMCNVLSD 188
D+V K R NL +A+ + N A K V SYN I+ A+ R K + +
Sbjct: 136 DLVVKSCARVNLINKALSIV-NLA-KSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKE 193
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + GV+P++ T +I++ F AG + + G +E G + + N ++ C+
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRK 253
Query: 249 VGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEI-------------- 293
+G A L M K L N+++YN+VI+G + GQ+ E +L+E+
Sbjct: 254 IGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNT 313
Query: 294 ---------------------VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
V G SP+ +T++ LI + +AG ++ A+E D M+++G
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ Y +I + G + + K M P + TY LI+G ++ DA
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDAS 433
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+ +EM++RG +P + ++ + C A + + G + Y L++ L
Sbjct: 434 GLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGL 493
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
+ G + DL+ EM G P D Y +I C G L+ A+ + +E ++KGF P
Sbjct: 494 CKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDI 553
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y+ L N ++ + A L K+
Sbjct: 554 VTYNVLINGFNKQSRTKEAKRLLLKL 579
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 199/415 (47%), Gaps = 24/415 (5%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
GEA L A+K N ++ SYNV++ L R +L +M+K PD T +
Sbjct: 255 GEAFKLLRLMALKGLN--PNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFN 312
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK 262
+++ + G ++A+ + + GL + + ++ +C+ ++ A + M+ +
Sbjct: 313 TLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDR 372
Query: 263 VLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
L N TY +I G+S+ G + + +++KE+V GF+P +T++ LI G GR++DA
Sbjct: 373 GLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDA 432
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+ M E+G PD +Y+ +IS + + ++ + M + P++ TY+ LI G
Sbjct: 433 SGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQG 492
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L K R++ + ++F+EML G+ P T TS + C G A+ ++ + + G
Sbjct: 493 LCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPD 552
Query: 442 LTAYKLLLRRLSGFGKCG-------MLLDLWHEMQESGYPSDGEIYE-----------YV 483
+ Y +L+ +GF K +LL L +E + + + +
Sbjct: 553 IVTYNVLI---NGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALAL 609
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ G C G + A V+E L+KG+ + VY+ + + +E AYNL++++
Sbjct: 610 MKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEM 664
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 171/375 (45%), Gaps = 31/375 (8%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV N + KA + +F L M G++P+ T + ++D F + G + +
Sbjct: 341 PNVVTYTTLINSMCKAGNLNRAMEF----LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQ 396
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVIS 275
A Q++ + + G + N ++ C + AS L M + + +V++Y+ +IS
Sbjct: 397 AYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIIS 456
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G+ + ++ + ++ E+VA+G SPD T+S LI+GL + R+ + ++F M G P
Sbjct: 457 GFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPP 516
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D Y ++I+ Y GD D+ ++ + M P++ TY LI+G K + +A +
Sbjct: 517 DEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL 576
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
++L VP+ T + ++ + + +K A L + GF
Sbjct: 577 LKLLYEESVPNEITYNTLID--------NCNNLEFKSA---------------LALMKGF 613
Query: 456 GKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G++ + + M + GY + E+Y +I G +G +E A + +E L GF P
Sbjct: 614 CMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHS 673
Query: 513 LVYSKLSNKLLASNK 527
+ L+ L K
Sbjct: 674 VTIMALAKSLYHEGK 688
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 116/272 (42%), Gaps = 36/272 (13%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR-IDDAIEVFDT 327
+++V+ +++ + + ++ + GF P L+++ +++ + R + + A +F
Sbjct: 134 VFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKE 193
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M E G P+ YN +I + + G+ + + ++ M C PN+ TY +I K RK
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRK 253
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A ++ M +G+ P+ L +Y +
Sbjct: 254 IGEAFKLLRLMALKGLNPN-----------------------------------LISYNV 278
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
++ L G+ ++ EM + Y D + +I G CN+G A+++ E ++ G
Sbjct: 279 VINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNG 338
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P+ + Y+ L N + + L A +++
Sbjct: 339 LSPNVVTYTTLINSMCKAGNLNRAMEFLDQMR 370
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 92/219 (42%), Gaps = 51/219 (23%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ DV +Y+ +++ L +++ +C++ +M G+ PD T + +++++ G + KA+
Sbjct: 479 ISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKAL 538
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCL----------------------------------C 244
++ + G D + NV++ C
Sbjct: 539 RLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNC 598
Query: 245 QRLHVGAASSLFNS--MKG------KVL---------FNVMTYNIVISGWSKLGQVVEME 287
L +A +L MKG +VL N YN++I G SK+G + +
Sbjct: 599 NNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAY 658
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
+ KE++ GF+P S+T L + L G+ + ++ D
Sbjct: 659 NLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLD 697
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 197/433 (45%), Gaps = 5/433 (1%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVG--KVVNRGNLSGEAMVLFFNWAIKHPNVAKDV 163
LQ L +++ A W + +S ++ G V+ G L+ + +++F + DV
Sbjct: 145 ILQILVDNCLMKSAYWVMERIISFEMYGIVDVLIGGYLNYQCLLVF--EKMMRNRFLPDV 202
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
K+ N I+K L + V M + G+ P + T + ++ SF + G+V +A+ ++ +
Sbjct: 203 KNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPK 262
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQ 282
+++ G + NV++ L ++ + A L M K + + TYN +I G+ K G
Sbjct: 263 MQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGL 322
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+VE + +E+V G SP + + ++ G + G++ DA + M +K PD +YN
Sbjct: 323 LVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNT 382
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I + +G+ E + N N+ TY LI GL + + AL++ E+M++RG
Sbjct: 383 LIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRG 442
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
I P T T + C G A + + VG AY + G
Sbjct: 443 IHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAF 502
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
L EM G+P D Y + GLC +G LE A ++++ +R G P + Y+ +
Sbjct: 503 KLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAH 562
Query: 523 LASNKLESAYNLF 535
+ + L +F
Sbjct: 563 MENGHLREGREIF 575
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 177/375 (47%), Gaps = 1/375 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ ++ + +M GV+P + + + +M F + G++ A Q L +
Sbjct: 309 TYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDM 368
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQV 283
L D S N +++ C+ ++G A L + ++ + L FN++TYN +I G +LG +
Sbjct: 369 LKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDL 428
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
++ ++++ G PD +T++ L+ G + G + A E FD M G PD AY A
Sbjct: 429 ETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTAR 488
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I + +GD + K + M + P++ TY ++GL K + +A E+ ++M+ G
Sbjct: 489 IVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGH 548
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
VP T TSF+ G ++ G ++ Y +L+ + G+ +
Sbjct: 549 VPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMA 608
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ EMQE G + Y +I G C + +++ A E KG P++ Y+ L N+
Sbjct: 609 YFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENC 668
Query: 524 ASNKLESAYNLFRKI 538
K + A L+ ++
Sbjct: 669 NMGKWQEALRLYAQM 683
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 168/374 (44%), Gaps = 1/374 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+ V S+N I+ + LSDM K+ + PD+ + + ++ F R G + +A
Sbjct: 338 VSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAF 397
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+L L L F+ + N ++ LC+ + A L M + + +V+TY ++++G
Sbjct: 398 ILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGA 457
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
KLG ++ + E++ G +PD ++ I G + G A ++ + M KG PD
Sbjct: 458 CKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDV 517
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN ++ +G+ +E + + M P+ TYT + +++ + + E+F +
Sbjct: 518 ITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYD 577
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
ML RG P+ T T + G AM + + ++ G ++ Y +L+ K
Sbjct: 578 MLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRK 637
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+ EMQE G + Y +I CN+G+ + A+ + + L K P +
Sbjct: 638 MDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGA 697
Query: 518 LSNKLLASNKLESA 531
L KL K+++
Sbjct: 698 LLKKLDKDYKVQAV 711
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 186/386 (48%), Gaps = 5/386 (1%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N+ + + +++ L + D ++L M K G PD+ T S++++ +A ++ +A
Sbjct: 369 NIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEA 428
Query: 218 IQMLGRLED--FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--NVMTYNIV 273
+ L ++ S N +L LC+ V A ++F++M + F +V++Y+I+
Sbjct: 429 QEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSIL 488
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
I G+ K+ ++ E++ K+++ P+ T++ + GL R GRI DA V++ M GC
Sbjct: 489 IDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGC 548
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
PD Y+ +I + D+ + ++ M S C PN TY L+ GL K K +A E
Sbjct: 549 SPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHE 608
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+F +M++RG P T T+ L C+ G A+ ++ + G + AY LL+
Sbjct: 609 LFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFF 668
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSR 512
GK G L+ M D + +I GL +L++AV V E + C P
Sbjct: 669 RAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDL 728
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y+ L L +L A +F++I
Sbjct: 729 VTYNSLIFGLCGEQRLSEAMKVFKEI 754
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 169/378 (44%), Gaps = 4/378 (1%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y+++++ L D ++A + P T V+ +AG+V A+ +L +
Sbjct: 342 YDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMI 401
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMT---YNIVISGWSKLGQ 282
G D + ++++ LC+ + A M K+ + YN +++ K +
Sbjct: 402 KRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKK 461
Query: 283 VVEMERVLKEIVAE-GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
V + + +V+E F PD +++S LI+G + + A +++ M + C P+ YN
Sbjct: 462 VHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYN 521
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A ++ + G + Y+ M + C P++ TY+ LI G +RK A E+FE M+ R
Sbjct: 522 AFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISR 581
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G P+ T L LC P A +++K + GC Y LL GK
Sbjct: 582 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQA 641
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
++++ EM G+ D Y ++ G G+ A + + + + P + ++ + +
Sbjct: 642 VEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDG 701
Query: 522 LLASNKLESAYNLFRKIK 539
L + +L+ A +F +++
Sbjct: 702 LSKAKRLDDAVEVFERME 719
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 146/315 (46%), Gaps = 6/315 (1%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F+ + + DV SY++++ + + M P++ T + ++
Sbjct: 468 IFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGL 527
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNV 267
+R G++ A + + G D + + ++ A LF +M + N
Sbjct: 528 MRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNA 587
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TYN ++ G K + E + +++V G PD +T++ L+ G G+I+ A+EVFD
Sbjct: 588 VTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDE 647
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M KG PD AYN ++ + G E + ++ M S C+P+ ++ +I GL K+++
Sbjct: 648 MVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKR 707
Query: 388 VADALEVFEEM-LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+ DA+EVFE M D G P T S + LC AM ++K+ ++ A+
Sbjct: 708 LDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFN 767
Query: 447 LLLRRLSGFGKCGML 461
+LL + KCG++
Sbjct: 768 VLLEAI----KCGIV 778
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 168/381 (44%), Gaps = 19/381 (4%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES---LNVVLWC--- 242
M K G PD S ++ + + + +A ++ L+ ES LN V W
Sbjct: 260 MVKSGCKPDATIYSYMVLAHCKLENLDEAFKLF-------LEMAVESKAPLNNVAWTAFL 312
Query: 243 --LCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
LC+ + A +M+ + + Y+++I + G++ + E EI P
Sbjct: 313 SGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQP 372
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
S T +I+ L +AGR+D A+ + +TM ++G PD ++ +I+ E ++
Sbjct: 373 SSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFL 432
Query: 361 KGMSS--YNCEPNMDTYTRLISGLLKSRKVADALEVFEEML-DRGIVPSTGTITSFLEPL 417
+GM + + +Y L++ L K++KV A +F M+ +R VP + + ++
Sbjct: 433 QGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGF 492
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
C A +YK+ + C ++T Y L L G+ ++ EM +G D
Sbjct: 493 CKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDV 552
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
Y +I G + + A + E + +G P+ + Y+ L + L +K + A+ LFRK
Sbjct: 553 ITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRK 612
Query: 538 IKIARQNDYARRLWRSKGWHF 558
+ + R D R + + + F
Sbjct: 613 M-VERGCDPDRVTYTTLLYGF 632
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 180/425 (42%), Gaps = 30/425 (7%)
Query: 130 DVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDM 189
+ VG V+ GEA+ FF W ++ N DV +YN ++ L R + V M
Sbjct: 98 ETVGAVIKHLRDGGEALT-FFRW-LQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKM 155
Query: 190 AKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHV 249
+GV P+ T ++++ S +A++ G + D G K + V CL
Sbjct: 156 VAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKE 215
Query: 250 GAASSLFN-SMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
G S +F ++ +V +M ++ + + +E ++ + +V G PD+ +S++
Sbjct: 216 GEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYM 275
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTN-AYNAVISNYISVGD----FDECMKYYKGM 363
+ + +D+A ++F M + P N A+ A +S G F+ C + +
Sbjct: 276 VLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESL 335
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
SS + Y LI L++S ++ A E E+ R I PS+GT S ++ LC G
Sbjct: 336 SS-----SQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRV 390
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI---- 479
+A+ + + K G + + +L+ L D E QE D +I
Sbjct: 391 DSALSLLETMIKRGYCPDMATHSMLINELCK-------ADKIQEAQEFLQGMDRKISSRS 443
Query: 480 -----YEYVIAGLCNIGQLENAVLVMEESL-RKGFCPSRLVYSKLSNKLLASNKLESAYN 533
Y ++ LC ++ A + + + F P + YS L + ++L A
Sbjct: 444 SSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEK 503
Query: 534 LFRKI 538
L++++
Sbjct: 504 LYKQM 508
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 94/224 (41%), Gaps = 36/224 (16%)
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
D E + +++ + + N + ++ TY L+ L++ R + A +VFE+M+ +G+VP+ T
Sbjct: 109 DGGEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYA 168
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG------------ 459
++ C A+ + + G K S T Y+ + L GK G
Sbjct: 169 VLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEK 228
Query: 460 -----MLL------------------DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
M+L L+ M +SG D IY Y++ C + L+ A
Sbjct: 229 RVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEA 288
Query: 497 V-LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
L +E ++ + + ++ + L S K+E A+ R ++
Sbjct: 289 FKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQ 332
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 189/431 (43%), Gaps = 13/431 (3%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
FL+ + KG D + + +G+ N + G ++ DV S
Sbjct: 101 FLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMG---------ILEESGAVIDVTS 151
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YNV++ + + VL M GV+P+ T V+ S G++ +A+Q+LGR
Sbjct: 152 YNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQL 208
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
D + V++ C+ VG A LFN M+ K +V+TYN++I G+ K G++
Sbjct: 209 QSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLD 268
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E R LK++ + G PD ++ + ++ L GR DA+++ TM KGC P +N +I
Sbjct: 269 EAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILI 328
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ G + + + M + PN ++ LI G + + A+E E M+ RG
Sbjct: 329 NFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCY 388
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P T L LC G A+++ + GC SL +Y ++ L GK + ++L
Sbjct: 389 PDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVEL 448
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
EM G D V+ GL G++ A+ R P+ +Y+ + L
Sbjct: 449 LEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCK 508
Query: 525 SNKLESAYNLF 535
S + A +
Sbjct: 509 SQQTSLAIDFL 519
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 180/386 (46%), Gaps = 6/386 (1%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIK-HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDM 189
V+ + +RG L VL K +P DV + V++ A + + ++M
Sbjct: 187 VLCSLCDRGKLKQAMQVLGRQLQSKCYP----DVVTCTVLIDATCKESGVGQAMKLFNEM 242
Query: 190 AKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHV 249
+G PD+ T ++++ F + G++ +AI+ L +L +G + D S N++L LC
Sbjct: 243 RNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRW 302
Query: 250 GAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
A L +M K L +V+T+NI+I+ + G + + VL+ + G +P+S +F+ L
Sbjct: 303 MDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPL 362
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I+G ID AIE + M +GC PD YN +++ G D+ + +SS C
Sbjct: 363 IQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGC 422
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P++ +Y +I GLLK K A+E+ EEM +G+ P T TS + L G AM
Sbjct: 423 SPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMK 482
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ ++ + + Y ++ L + + +D +M G Y +I G+
Sbjct: 483 FFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGIT 542
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLV 514
G E+A + E +G LV
Sbjct: 543 YEGLAEDASKLSNELYSRGLVKRSLV 568
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 3/255 (1%)
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ E R L+ + +G SPD + + LI + GR +A ++ ++E G D +Y
Sbjct: 93 GELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSY 152
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +IS Y G+ +E ++ M PN TY ++ L K+ A++V L
Sbjct: 153 NVLISGYCKSGEIEEALRVLDRMGV---SPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQ 209
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
P T T ++ C AM ++ + R GCK + Y +L++ G+
Sbjct: 210 SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDE 269
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ ++ G D + ++ LC+ G+ +A+ ++ LRKG PS + ++ L N
Sbjct: 270 AIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILIN 329
Query: 521 KLLASNKLESAYNLF 535
L L A N+
Sbjct: 330 FLCQKGLLGKALNVL 344
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 100/245 (40%), Gaps = 11/245 (4%)
Query: 299 SPDSLTFSFLIEG--------LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
SPD + S E L R G +++ + M KG PD A A+I + +
Sbjct: 68 SPDRVNTSLNFEESEIRHLRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKI 127
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
G + + ++ +Y LISG KS ++ +AL V + M G+ P+ T
Sbjct: 128 GRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATY 184
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+ L LC G AM + + + C + +L+ G + L++EM+
Sbjct: 185 DAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRN 244
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G D Y +I G C G+L+ A+ +++ G P + ++ + L + +
Sbjct: 245 KGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMD 304
Query: 531 AYNLF 535
A L
Sbjct: 305 AMKLL 309
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 185/376 (49%), Gaps = 7/376 (1%)
Query: 169 IVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
+++ L + D ++L M K G PD+ T S++++ +A ++ +A + L + +
Sbjct: 55 VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM-NRT 113
Query: 229 LKFDAESL---NVVLWCLCQRLHVGAASSLFNSMKGK--VLFNVMTYNIVISGWSKLGQV 283
+ A S N +L LC+ V A ++F++M + V+ +V++Y+I+I G+ K+ ++
Sbjct: 114 ISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDEL 173
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E++ K+++ P+ T++ + GL R GRI DA V++ M GC PD Y+ +
Sbjct: 174 GRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTL 233
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I + D+ + ++ M S C PN TY L+ GL K K +A E+F +M++RG
Sbjct: 234 IHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGC 293
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P T T+ L C+ G A+ ++ + G + AY LL+ GK G
Sbjct: 294 DPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQ 353
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRLVYSKLSNKL 522
L+ M D + +I GL +L++AV V E + C P + Y+ L L
Sbjct: 354 LFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGL 413
Query: 523 LASNKLESAYNLFRKI 538
+L A +F++I
Sbjct: 414 CGEQRLSEAMKVFKEI 429
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 143/310 (46%), Gaps = 2/310 (0%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F+ + +V DV SY++++ + + M P++ T + ++
Sbjct: 143 IFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGL 202
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNV 267
+R G++ A + + G D + + ++ A LF +M + N
Sbjct: 203 MRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNA 262
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TYN ++ G K + E + +++V G PD +T++ L+ G G+I+ A+EVFD
Sbjct: 263 VTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDE 322
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M KG PD AYN ++ + G E + ++ M S C+P+ ++ +I GL K+++
Sbjct: 323 MVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKR 382
Query: 388 VADALEVFEEM-LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+ DA+EVFE M D G P T S + LC AM ++K+ ++ A+
Sbjct: 383 LDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFN 442
Query: 447 LLLRRLSGFG 456
+LL + G
Sbjct: 443 VLLEAMYAAG 452
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 155/344 (45%), Gaps = 4/344 (1%)
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
T V+ +AG+V A+ +L + G D + ++++ LC+ + A M
Sbjct: 51 TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110
Query: 260 KGKV---LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAE-GFSPDSLTFSFLIEGLGRA 315
+ + +YN +++ K +V + + +V+E PD +++S LI+G +
Sbjct: 111 NRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKI 170
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
+ A +++ M + C P+ YNA ++ + G + Y+ M S C P++ TY
Sbjct: 171 DELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITY 230
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
+ LI G +RK A E+FE M+ RG P+ T L LC P A +++K +
Sbjct: 231 STLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 290
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
GC Y LL GK ++++ EM G+ D Y ++ G G+
Sbjct: 291 RGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGE 350
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
A + + + + P + ++ + + L + +L+ A +F +++
Sbjct: 351 ARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERME 394
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 134/287 (46%), Gaps = 6/287 (2%)
Query: 258 SMKGKVLFNVMTYNIVISGWSKLG---QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
+++ K N + + + G K G Q E R ++E ++ P S T +I+ L +
Sbjct: 2 AVESKAPLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCK 61
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY--NCEPNM 372
AGR+D A+ + +TM ++G PD ++ +I+ E ++ +GM+ +
Sbjct: 62 AGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSC 121
Query: 373 DTYTRLISGLLKSRKVADALEVFEEML-DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+Y L++ L K++KV A +F M+ +R +VP + + ++ C A +YK
Sbjct: 122 FSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYK 181
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ + C ++T Y L L G+ ++ EM +G D Y +I G
Sbjct: 182 QMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLAR 241
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ + A + E + +G P+ + Y+ L + L +K + A+ LFRK+
Sbjct: 242 KHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKM 288
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 193/465 (41%), Gaps = 62/465 (13%)
Query: 115 VIEDALWNVN-VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKAL 173
++ + L NVN V L V+ ++ RG + D+ +Y ++K L
Sbjct: 136 ILLNCLCNVNRVGEGLAVMAGILRRGYIP-------------------DIVTYTTLIKGL 176
Query: 174 GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI----QMLGRLEDFGL 229
+ + M K G P+ T +M R G + A+ +ML +G+
Sbjct: 177 CMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGI 236
Query: 230 KFDAE--SLNVVLWCLCQRLHVGAASSLFNSMK--------------------------G 261
F S ++++ LC+ A LF MK
Sbjct: 237 NFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEA 296
Query: 262 KVLFN----------VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
K LFN V+T+N++I K G+V+E + +L+ ++ G P+ LT++ LIEG
Sbjct: 297 KRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEG 356
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
G ++ A E+F +M KGC PD Y +I+ Y +E MK Y GM P+
Sbjct: 357 FCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPD 416
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+ TY L++GL + KV DA ++F M GI FL LC G AM ++
Sbjct: 417 VKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFN 476
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
K + KL + + L+ L GK +L+ ++ + D Y +I C G
Sbjct: 477 KLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGG 536
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
Q+ A ++ ++ + G P ++ Y+ L S KLE L
Sbjct: 537 QVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLH 581
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 174/378 (46%), Gaps = 6/378 (1%)
Query: 109 KLKGKGVIEDALWNVN---VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
KL + + + +L+ +N V +S ++ + + EA LF ++ + V S
Sbjct: 222 KLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQ--GMTPTVIS 279
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y ++ ++ + ++M +GV P++ T ++++D + G+V +A +L +
Sbjct: 280 YTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMI 339
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
G+ + + N ++ C + +A LF SM K +V+ Y ++I+G+ K +V
Sbjct: 340 QRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVE 399
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E ++ ++ G PD T+ L+ GL + G++ DA ++F MK G D Y +
Sbjct: 400 EAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFL 459
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ G E M+ + + SYN + +++ + LI GL K+ K+ A E+FE++ +
Sbjct: 460 NGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQ 519
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P T + C G A ++++K K GC Y L+R K +++L
Sbjct: 520 PDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVEL 579
Query: 465 WHEMQESGYPSDGEIYEY 482
H M + D I +
Sbjct: 580 LHMMVQRDVSLDVNILRH 597
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 168/409 (41%), Gaps = 43/409 (10%)
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
GN++ FF+ + + N + S+ ++ L + K + + + + M G++PD
Sbjct: 73 GNITATQAFQFFHLMM-YSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDC 131
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
TL+I+++ +V + + ++ + G D + ++ LC + A+ LF
Sbjct: 132 CTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTR 191
Query: 259 M-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG------FSPDSLTFSFLIEG 311
M K N +TY ++ G + G + ++ +E++ + F P +++S +I+
Sbjct: 192 MQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDA 251
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
L + R D+A ++F+ MK +G P VIS
Sbjct: 252 LCKDRREDEARDLFEEMKVQGMTP------TVIS-------------------------- 279
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
YT LI G K +A +F EM+++G+ P+ T ++ LC G A + +
Sbjct: 280 ---YTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLE 336
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ G +L Y L+ G +L+ M G D Y +I G C
Sbjct: 337 VMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTS 396
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
++E A+ + L+ G P Y L L K+ A LF +K+
Sbjct: 397 KVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKV 445
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 179/384 (46%), Gaps = 7/384 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI--- 218
DV +Y ++K L + M K G P++ T ++ R G + A+
Sbjct: 160 DVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLH 219
Query: 219 -QMLGRLEDFGL--KFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
+ML + + K + S N+++ LC+ A LFN M + V +V+T++ +I
Sbjct: 220 QEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALI 279
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
K G V+E ++ L+ ++ G PD TF+ LIEG G +D A E+F +M KG
Sbjct: 280 DTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYE 339
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD +Y +I Y + +E MK Y M P+M T+ L+ GL + KV DA ++
Sbjct: 340 PDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKL 399
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F + + + + FL+ LC G AM ++ + + KL + ++ L+ L
Sbjct: 400 FGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCK 459
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
K +L+ ++ + G D Y +I G C GQ++NA ++ + G P+ L
Sbjct: 460 ARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLT 519
Query: 515 YSKLSNKLLASNKLESAYNLFRKI 538
YS L + +NKLE L K+
Sbjct: 520 YSALLHGFYKNNKLEEVVKLLHKM 543
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 155/327 (47%), Gaps = 1/327 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N ++ SYN+I+ L + + + ++M +GV PD+ T S ++D+ + G V +A
Sbjct: 232 NCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEA 291
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
+ L + G+ D + ++ C + +A LF SM K +V++Y ++I G
Sbjct: 292 KKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYG 351
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K V E ++ E++ G PD TF L++GL AG++ DA ++F +K +
Sbjct: 352 YCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKN 411
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+ + G E M+ + + SYN + +++++ LI GL K+RK+ A E+FE
Sbjct: 412 LYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFE 471
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
++ G+ P T + C G A ++++ + GC +L Y LL
Sbjct: 472 KLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNN 531
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYV 483
K ++ L H+M + IY V
Sbjct: 532 KLEEVVKLLHKMIQKDVSLAASIYTIV 558
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 115/270 (42%), Gaps = 29/270 (10%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+++++N+++ +K+ ++ + K++ G SP+ T + LI L R+ + +
Sbjct: 90 SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ +G PD Y ++I E + + M C PN+ TY LI GL ++
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRT 209
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+ AL++ +EML+ GT P+A + CK ++ +Y
Sbjct: 210 GNINLALKLHQEMLN-------GT------------SPYA----------INCKPNIFSY 240
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+++ L GK L++EM + G D + +I LC G + A +E +
Sbjct: 241 NIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMML 300
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+G P ++ L L+SA LF
Sbjct: 301 RGIVPDLFTFTSLIEGFCLVGDLDSAKELF 330
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EAM LF +K N+ D++S+N ++ L + + + + +++EG+ PD+ T I
Sbjct: 430 EAMELFNE--LKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCI 487
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFG 228
+++ F + GQV A + +E+ G
Sbjct: 488 MINGFCKNGQVDNANILFQMMEENG 512
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 87/202 (43%), Gaps = 38/202 (18%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRK-FFDFMCNVLSDMAKEGVNPDLETL 201
G+A LF +K V K++ +V + L + F+ M + +++ + D+E+
Sbjct: 394 GDAKKLF--GVVKPHAVPKNLYICSVFLDGLCKNGCLFEAM-ELFNELKSYNMKLDIESF 450
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+ ++D +A ++ A ++ +L GL+ D
Sbjct: 451 NCLIDGLCKARKLETAWELFEKLSQEGLQPD----------------------------- 481
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
V+TY I+I+G+ K GQV + + + G +P+ LT+S L+ G + ++++
Sbjct: 482 -----VVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEV 536
Query: 322 IEVFDTMKEKGCGPDTNAYNAV 343
+++ M +K + Y V
Sbjct: 537 VKLLHKMIQKDVSLAASIYTIV 558
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 47/99 (47%)
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
S+ ++ LLL L+ + L+ +M +G + +I LCN+ ++ + M
Sbjct: 90 SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+R+G+ P + Y+ L L +++ A LF +++
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQ 188
>gi|449466251|ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 204/427 (47%), Gaps = 7/427 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLS-GEAM--VLFFNWAIKHPNVAKDVKSYNVIVKA 172
++ +L + V LS +++ V+ R S G + + FFN+ K S + ++
Sbjct: 58 MKHSLESSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTAKRRGFYHTSFSVDTMLYI 117
Query: 173 LGRRKFFDFMCNVLSDMA-KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF 231
LGR + FD + +VL D+ K+ L T+ +V+ + V + ++ + + F +F
Sbjct: 118 LGRSRKFDKIWDVLLDVKFKDPSLISLRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEF 177
Query: 232 DAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLK 291
D N +L LCQ + A ++++ +K N+ T+NI++SGW E E
Sbjct: 178 DVTCFNALLRTLCQEKSMMDARNVYHGLKSMFRPNLQTFNILLSGWK---SSEEAEGFFD 234
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
E++ G PD ++++ L++ + +D A +V M+++ D Y ++I VG
Sbjct: 235 EMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSIIGGLGLVG 294
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
D+ K M Y C P++ Y I ++++ +A ++ +EM+++G+ P+ T
Sbjct: 295 QPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLSPNATTYN 354
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
F +A +Y++ GC + + L+R + K M L+LW++M +
Sbjct: 355 LFFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEEMALELWNDMIQK 414
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G+ S + E + LC++G+L A + + KG PS + ++ + +NK E+
Sbjct: 415 GFGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKPSYTSFKRIKVLMELANKHEAL 474
Query: 532 YNLFRKI 538
NL +K+
Sbjct: 475 QNLSKKM 481
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 196/437 (44%), Gaps = 41/437 (9%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF + P V +N ++ A+ R + D + ++ M ++ + D+ + +I
Sbjct: 64 DAIDLFSDMLRSRP--LPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++ F ++ A+ G+L GL D + +L LC V A LF+ +
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRP- 180
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF------------------ 305
+V+T+ +++G + G+VVE +L +V G PD +T+
Sbjct: 181 --DVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238
Query: 306 ------------------SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
S +I+GL + GR D+ +F M++KG P+ YN +I +
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
G + + + M PN+ TY LI+ +K K +A E+++EML RGI+P+T
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 358
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T S ++ C AA M+ GC + + L+ G + ++L HE
Sbjct: 359 ITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHE 418
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
M G ++ Y +I G C +G L A+ + ++ + G CP + + L + L + K
Sbjct: 419 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 478
Query: 528 LESAYNLFRKIKIARQN 544
L+ A +F+ ++ ++ +
Sbjct: 479 LKDALEMFKAMQKSKMD 495
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 183/429 (42%), Gaps = 47/429 (10%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
++ +V Y+ I+ L + N+ +M +G+ P++ T + ++ F +G+ A
Sbjct: 248 HIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAA 307
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
++L + + + + + N ++ + A+ L++ M + ++ N +TYN +I G
Sbjct: 308 QRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG 367
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K ++ E + + +G SPD TF+ LI+G A RIDD +E+ M +G +
Sbjct: 368 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 427
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGM-SSYNC--------------------------- 368
T YN +I + VGD + + + M SS C
Sbjct: 428 TVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 487
Query: 369 ------------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
EP++ TY LI GL+ K +A E++EEM RGIVP T T
Sbjct: 488 AMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITY 547
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+S ++ LC A M+ ++ + L+ G+ L+L+ EM
Sbjct: 548 SSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGR 607
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G +D IY +I G +G + A+ + +E + G P + + + +LE
Sbjct: 608 RGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELER 667
Query: 531 AYNLFRKIK 539
A + ++
Sbjct: 668 AVAMLEDLQ 676
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 162/360 (45%), Gaps = 14/360 (3%)
Query: 159 VAKDVKSYNVIVKALGRR-KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
++ +V +YN ++ A + KFF+ + +M G+ P+ T + ++D F + ++ A
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFE-AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA 377
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISG 276
M + G D + ++ C + L + M + L N +TYN +I G
Sbjct: 378 EDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHG 437
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE------ 330
+ +G + + +++++ G PD +T + L++GL G++ DA+E+F M++
Sbjct: 438 FCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 497
Query: 331 -----KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
G PD YN +I I+ G F E + Y+ M P+ TY+ +I GL K
Sbjct: 498 ASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 557
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
++ +A ++F M + P+ T + + C G + ++ + + G Y
Sbjct: 558 SRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIY 617
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ G LD++ EM SG D ++ G + +LE AV ++E+ R
Sbjct: 618 ITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQR 677
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 135/279 (48%), Gaps = 14/279 (5%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
+F+ A K + DV ++ ++ K D +L +M + G+ + T + ++
Sbjct: 380 MFYLMATK--GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHG 437
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL--- 264
F G + A+ + ++ G+ D + N +L LC + A +F +M+ +
Sbjct: 438 FCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 497
Query: 265 ----FN-----VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
FN V+TYNI+I G G+ +E E + +E+ G PD++T+S +I+GL +
Sbjct: 498 ASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 557
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
R+D+A ++F +M K P+ +N +I+ Y G D+ ++ + M + Y
Sbjct: 558 SRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIY 617
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
LI G K + AL++F+EM+ G+ P T TI + L
Sbjct: 618 ITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 656
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 90/178 (50%), Gaps = 1/178 (0%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
GV PD+ T +I++ I G+ +A ++ + G+ D + + ++ LC++ + A
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 253 SSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
+ +F SM K NV+T+N +I+G+ K G+V + + E+ G D++ + LI G
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
+ G I+ A+++F M G PDT +++ + S + + + + + Y E
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQLE 681
>gi|125541207|gb|EAY87602.1| hypothetical protein OsI_09013 [Oryza sativa Indica Group]
Length = 555
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 207/449 (46%), Gaps = 29/449 (6%)
Query: 117 EDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRR 176
E AL + +L+ +V V++R + FF WA + +YN ++ L
Sbjct: 100 EAALDALGAELTTPLVADVLHRLRYDEKLAFRFFVWASHQGGYEHEAATYNDVIDILSGT 159
Query: 177 KF----FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY--KAIQMLGRLED---- 226
++ F +C+VL M + T S+ +D + + Y K + L +L
Sbjct: 160 RYKARQFGVLCDVLDHMKRR------RTRSVPVDDLLGILRAYTEKHLTHLRKLAKKRRV 213
Query: 227 -FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE 285
+ ++LNV+L C+ V A ++F+ +K K+L N TY+I+ GW +
Sbjct: 214 RMRTPPETDALNVLLDAFCKSGMVREAEAVFSRVKRKLLGNAETYSILFFGWCRARDPKR 273
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC---GPDTNAYNA 342
+VL+E++ +P++ T++ I+ AG + +A ++F+ M+ +G P Y+
Sbjct: 274 AMKVLEEMIQMKHTPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSI 333
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I+ G +EC + M C P++ TY LI G+L K+ A V +EM G
Sbjct: 334 MIAALAKAGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAG 393
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P T FL+ LC A+ + ++ + C+ S+ Y +L+ + +
Sbjct: 394 FPPDIVTYNCFLKVLCGLQKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRAI 453
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
++W EM + G + YE +I GL + G+ E+A +++E + +G +L Y K +
Sbjct: 454 NIWIEMDKRGCHRAVDTYETMIDGLFDSGRTEDATTLLDEVINRGM---KLSYKKFDAIM 510
Query: 523 LASNKLESAYNLFRKIKIARQNDYARRLW 551
L +L + NL I R +++ RR +
Sbjct: 511 L---RLSAVGNLG---AIHRLSEHMRRFY 533
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 178/378 (47%), Gaps = 1/378 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +V +Y +++ L + + D V M +GV P++ T + ++ ++ GQ + +
Sbjct: 235 IPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVV 294
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+ML + GL+ D + ++L LC++ A LF+SM K + +V Y I++ G+
Sbjct: 295 RMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGY 354
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G + EM L +V G SP+ F+ + + I +A+++F+ M+++G P+
Sbjct: 355 ATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNV 414
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +I +G D+ + M + PN+ +T L+ GL K A E+F E
Sbjct: 415 VNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFE 474
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+++GI P+ + + LC+ G A + +VG + + +Y L+R GK
Sbjct: 475 MVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGK 534
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L M G + Y ++ G C G++++A V +E L G P + Y+
Sbjct: 535 TDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNT 594
Query: 518 LSNKLLASNKLESAYNLF 535
+ + L + + A L+
Sbjct: 595 ILHGLFKTRRFSEAKELY 612
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 187/435 (42%), Gaps = 40/435 (9%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN---PDLE 199
GEAM + + +V SYN ++K + +L MA V P+L
Sbjct: 147 GEAMGVLLR-RMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLV 205
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
+ + V++ F GQV KA + + D G+ + + +V+ LC+ V A +F M
Sbjct: 206 SYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQM 265
Query: 260 KGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
K V N++TY +I G+ +GQ E+ R+LKE+ A G PD T+ L++ L + G+
Sbjct: 266 IDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKC 325
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD------------------------ 354
+A ++FD+M KG PD + Y ++ Y + G
Sbjct: 326 TEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIV 385
Query: 355 -----------ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
E M + M PN+ Y LI L K +V DA F +M++ G+
Sbjct: 386 FCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGV 445
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ TS + LC+ A ++ + G ++ + ++ L G+
Sbjct: 446 APNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQR 505
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L M+ G D Y +I G C +G+ + A +++ L G P+ Y+ L +
Sbjct: 506 LIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYC 565
Query: 524 ASNKLESAYNLFRKI 538
+++ AY++F+++
Sbjct: 566 RDGRIDDAYSVFQEM 580
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 164/388 (42%), Gaps = 13/388 (3%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV Y +I+ + M + L M G++P+ +IV +F + + +A+
Sbjct: 340 IKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAM 399
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK------VLFNVMTYNI 272
+ ++ GL + + ++ LC+ V A FN M + V+F + Y +
Sbjct: 400 DIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGL 459
Query: 273 -VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
I W K G++ E+V +G P+ + F+ ++ L GR+ A + D M+
Sbjct: 460 CTIDKWEKAGEL------FFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERV 513
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G PD +YNA+I + VG DE K M S +PN TY L+ G + ++ DA
Sbjct: 514 GTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDA 573
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
VF+EML GI P T + L L A +Y G + S+ Y ++L
Sbjct: 574 YSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNG 633
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
LS L ++ + D + +I L G+ E+A+ + G P
Sbjct: 634 LSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPD 693
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y ++ L+ LE +F +++
Sbjct: 694 VTTYRLIAENLIEEGSLEEFDGMFSEME 721
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 146/314 (46%), Gaps = 6/314 (1%)
Query: 232 DAESLNVVLWCLCQ--RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERV 289
D + ++++ C C+ RL G A+ G + +V+ N ++ G +V E V
Sbjct: 93 DVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMGV 152
Query: 290 LKEIVAE-GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE---KGCGPDTNAYNAVIS 345
L ++E G +P+ ++++ L++G R ++A+E+ M + + C P+ +YN VI+
Sbjct: 153 LLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVIN 212
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+ + G D+ + M+ PN+ TYT +I GL K++ V A VF++M+D+G+ P
Sbjct: 213 GFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRP 272
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
+ T T + S G + M K+ G + Y LLL L GKC L+
Sbjct: 273 NIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLF 332
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
M G D IY ++ G G L ++ + G P+ +++ +
Sbjct: 333 DSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKK 392
Query: 526 NKLESAYNLFRKIK 539
+ A ++F K++
Sbjct: 393 AMIGEAMDIFNKMR 406
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 159/355 (44%), Gaps = 3/355 (0%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
GEAM +F ++ ++ +V +Y ++ AL + D + M EGV P++ +
Sbjct: 396 GEAMDIFNK--MRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFT 453
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KG 261
++ + KA ++ + + G+ + N ++ LC V A L + M +
Sbjct: 454 SLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERV 513
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
++++YN +I G +G+ E ++L +++ G P+ T++ L+ G R GRIDDA
Sbjct: 514 GTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDA 573
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
VF M G P YN ++ F E + Y M + + ++ TY +++G
Sbjct: 574 YSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNG 633
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L K+ V +AL++F+ + + + T + L G AM ++ G
Sbjct: 634 LSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPD 693
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
+T Y+L+ L G ++ EM++SG + + +++ L G + A
Sbjct: 694 VTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRA 748
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 162/383 (42%), Gaps = 41/383 (10%)
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG-LKFDAESLNVVLWCLCQRLHVGAA 252
V PD+ T SI++ F R G++ G + G D +N +L LC VG A
Sbjct: 90 VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149
Query: 253 SSLFNSMKGKV--LFNVMTYNIVISGW---SKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ ++ NV++YN ++ G+ ++ + +E+ ++ + P+ ++++
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
+I G G++D A +F M ++G P+ Y VI D ++ M
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
PN+ TYT LI G L + + + + +EM G+ P T L+ LC G A
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEAR 329
Query: 428 MMYKKARKVGCKLSLTAYKLLLRR--------------------------------LSGF 455
++ + G K ++ Y ++L F
Sbjct: 330 KLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAF 389
Query: 456 GKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
K M+ +D++++M++ G + Y +I LC +G++++A L + + +G P+
Sbjct: 390 AKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNI 449
Query: 513 LVYSKLSNKLLASNKLESAYNLF 535
+V++ L L +K E A LF
Sbjct: 450 VVFTSLVYGLCTIDKWEKAGELF 472
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 138/544 (25%), Positives = 243/544 (44%), Gaps = 35/544 (6%)
Query: 2 AFLSRFYRTRYPLSSLSSSFSLFSFSTSVRSNLSYNELLSNQKKNMSSLDEHHVLKELSD 61
A L+R R + ++ + SL S VR +SYN +L+ + L L L+D
Sbjct: 49 ALLNRRLRA----APVTEACSLLSALPDVRDAVSYNIVLAALCRRGGDL--RQALSLLAD 102
Query: 62 LFQISSHNSFPNVYKESRSNSVKRIDSSRAVDEF--LLPEERLRGVFLQKLKGKGVIEDA 119
+ + + + PN S + ++ + +SR DE LL + GV + +I
Sbjct: 103 MSREAHPAARPNAV--SYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGL 160
Query: 120 LWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFF 179
+D +L+++G++ G HPNV Y+ +++ R +
Sbjct: 161 CDAAELDGALELLGEMCGSG---------------VHPNVI----VYSCLLRGYCRSGRW 201
Query: 180 DFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVV 239
+ V +M++ GV PD+ + +D + G++ KA+++ + GL+ + + NV+
Sbjct: 202 QDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVL 261
Query: 240 LWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG- 297
+ CLC+ V A +L N M K V +V+TYN +I+G S + ++ +L+E++ +G
Sbjct: 262 INCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMI-QGD 320
Query: 298 --FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
PD +TF+ +I GL + GR+ AI V + M E+GC + YN +I ++ V +
Sbjct: 321 TLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNM 380
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
M + S EP+ TY+ LI+G K +V A M RGI L
Sbjct: 381 AMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLA 440
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
LC G AM+++ + + C L AY ++ G L +M + G
Sbjct: 441 ALCQLGMMEQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAP 499
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
D Y +I +G LE A V+++ GF P V+ L A ++ +L
Sbjct: 500 DAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLI 559
Query: 536 RKIK 539
+++
Sbjct: 560 HEMR 563
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 101/203 (49%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ R + N++S++ G+ PD T SI+++ F + +V +A L +
Sbjct: 364 TYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTM 423
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVV 284
G++ + +L LCQ + A LFN M + + Y+ ++ G K G +
Sbjct: 424 TQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGACKSGDIK 483
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+++L++++ EG +PD++T+S LI + G +++A V M G PD ++++I
Sbjct: 484 AAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLI 543
Query: 345 SNYISVGDFDECMKYYKGMSSYN 367
Y + G ++ + M + N
Sbjct: 544 KGYSAEGQINKILDLIHEMRAKN 566
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 167/353 (47%), Gaps = 1/353 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V + + GV + + +I+ S + G+V +A Q+L ++E G D S + V+ C
Sbjct: 240 VFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYC 299
Query: 245 QRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
Q + L M+ K L N TYN VI K G+V E ERVL+E+++EG +PD +
Sbjct: 300 QVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGV 359
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
++ LI+G + G + A +FD M+++ PD Y AVI G E K + M
Sbjct: 360 IYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM 419
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
EP+ TYT LI G K K+ +A + +ML G+ P+ T T+ + LC G
Sbjct: 420 VCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEV 479
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A + + + G +L++ Y L+ L G + L +M+ +G+ D Y +
Sbjct: 480 DTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 539
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
+ C ++ A ++ + L + P+ + ++ L N S LE L +
Sbjct: 540 MDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLK 592
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 162/356 (45%), Gaps = 1/356 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
VL +M EG+ PD + ++D F + G V A ++ ++ + D + V+ LC
Sbjct: 345 VLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLC 404
Query: 245 QRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
Q V A LF+ M K L + +TY +I G+ K G++ E + +++ G +P+ +
Sbjct: 405 QTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIV 464
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T++ L +GL + G +D A E+ M KG + YN++++ G+ D+ +K K M
Sbjct: 465 TYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDM 524
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
P+ TYT L+ KSR++ A E+ +MLDR + P+ T + C G
Sbjct: 525 EVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGML 584
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
+ K + G + T Y L+++ +++ M G DG Y +
Sbjct: 585 EDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNIL 644
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I G C ++ A + + + KGF + Y+ L K A LF +++
Sbjct: 645 IKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMR 700
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 157/347 (45%), Gaps = 2/347 (0%)
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH-VGAASSL 255
D I + AG + +A ++ ++ ++GL +S N+ + L + L + A +
Sbjct: 181 DPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKV 240
Query: 256 FNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
F + V +N +YNI+ +LG+VVE ++L ++ G PD +++S +I G +
Sbjct: 241 FVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQ 300
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G + +++ + M+ KG P+ YN VI G E + + M S P+
Sbjct: 301 VGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVI 360
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
YT LI G K V+ A +F+EM R I P T T+ + LC G A ++ +
Sbjct: 361 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 420
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
+ Y L+ GK L ++M + G + Y + GLC G+++
Sbjct: 421 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVD 480
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
A ++ E RKG + Y+ L N L + ++ A L + +++A
Sbjct: 481 TANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVA 527
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 122/249 (48%), Gaps = 5/249 (2%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PN+ +Y + L + D +L +M ++G+ ++ T + +++ +AG + +
Sbjct: 461 PNIV----TYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQ 516
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVIS 275
A++++ +E G DA + ++ C+ + A L M + L V+T+N++++
Sbjct: 517 AVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMN 576
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G+ G + + E++LK ++ +G P++ T++ LI+ + E++ M KG P
Sbjct: 577 GFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVP 636
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D N YN +I + + E ++ M + +Y LI G K +K +A E+F
Sbjct: 637 DGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELF 696
Query: 396 EEMLDRGIV 404
E+M G+V
Sbjct: 697 EQMRREGLV 705
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 113/249 (45%), Gaps = 1/249 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
++ +YN +V L + D ++ DM G +PD T + +MD++ ++ ++ +A ++L
Sbjct: 497 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 556
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++ D L+ + NV++ C + L M K ++ N TYN +I +
Sbjct: 557 RQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIR 616
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ + + + A+G PD T++ LI+G +A + +A + M KG ++Y
Sbjct: 617 NNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSY 676
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
NA+I + F E + ++ M + + Y K+ LE+ +E ++
Sbjct: 677 NALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIE 736
Query: 401 RGIVPSTGT 409
+ +V T
Sbjct: 737 KCLVGDIQT 745
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 1/210 (0%)
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK-VA 389
K G D ++ + G DE K + M +Y ++D+ IS L + +
Sbjct: 176 KDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIK 235
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
AL+VF E + G+ +T + LC G A + + GC + +Y ++
Sbjct: 236 IALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVI 295
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
G+ +L L EMQ G + Y VI LC G++ A V+ E + +G
Sbjct: 296 NGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIA 355
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P ++Y+ L + + SAY LF +++
Sbjct: 356 PDGVIYTTLIDGFCKLGNVSSAYRLFDEMQ 385
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 102/245 (41%), Gaps = 5/245 (2%)
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE---CM 357
D F + L AG +D+A ++FD M G ++ N IS+ D D +
Sbjct: 181 DPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSE--DLDGIKIAL 238
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
K + N +Y + L + +V +A ++ +M RG +P + ++ +
Sbjct: 239 KVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGY 298
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
C G + + ++ + G K + Y ++ L GK + EM G DG
Sbjct: 299 CQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDG 358
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
IY +I G C +G + +A + +E ++ P + Y+ + L + ++ A LF +
Sbjct: 359 VIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHE 418
Query: 538 IKIAR 542
+ R
Sbjct: 419 MVCKR 423
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 184/409 (44%), Gaps = 17/409 (4%)
Query: 125 VDLSLDVVGKVVNRG-NLSGEAMVLFFNWAIKHPNVAK---------------DVKSYNV 168
VDL+ V+ K++ G + NW K A+ DV +Y
Sbjct: 149 VDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTT 208
Query: 169 IVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
I+ L + +L M + G P++ T S ++DS + +V +A+ + ++ G
Sbjct: 209 IINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKG 268
Query: 229 LKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEME 287
+ D + N ++ LC AS+L N M+ ++ +++T+N+++ K G+V E +
Sbjct: 269 ISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQ 328
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
VLK + G PD +T+S L+ G + +A ++FD M KGC PD +YN +I+ Y
Sbjct: 329 GVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGY 388
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
V DE + + M PN +Y LI GL + + +A +F+ M G +P+
Sbjct: 389 CKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNL 448
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T + L+ C G A +++ + K +L Y +L+ + G L+ E
Sbjct: 449 FTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSE 508
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ G + +IY +I GLC G L+ A+ G P + Y+
Sbjct: 509 LFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYN 557
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 183/393 (46%), Gaps = 8/393 (2%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
P + + K + IVK +G +++D + ++ M G++P++ TLSI+++ F +V
Sbjct: 95 PCIIQFTKLLSAIVK-MG--QYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDL 151
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVIS 275
A +L ++ GL+ + ++ LC+ A LF+ M + +V TY +I+
Sbjct: 152 AFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIIN 211
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G K+G+ +LK++ G P+ +T+S +I+ + R+++A+++F MK KG P
Sbjct: 212 GLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISP 271
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D YN++I + + E M S N P++ T+ L+ + K KV++A V
Sbjct: 272 DIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVL 331
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
+ M + G+ P T +S + A ++ GCK + +Y +L+
Sbjct: 332 KTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKV 391
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
+ L++EM G + Y +I GLC +G L A + + G P+ Y
Sbjct: 392 KRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTY 451
Query: 516 SKLSNKLLASNKLESAYNLFRKIKIARQNDYAR 548
S L + A+ LFR A Q+ Y++
Sbjct: 452 SILLDGFCKQGYFGKAFRLFR----AMQSTYSK 480
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 124/245 (50%), Gaps = 8/245 (3%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y++ + + RK FD M +G PD+ + +I+++ + + ++ +A Q+ +
Sbjct: 353 YSLRSEVVEARKLFD-------AMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMI 405
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
GL + S N ++ LCQ + A +LF +M L N+ TY+I++ G+ K G
Sbjct: 406 HQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFG 465
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ R+ + + + P+ + ++ LI+ + ++G + DA ++F + KG P+ Y +I
Sbjct: 466 KAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTII 525
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ G DE ++ ++ M C P+ +Y +I G L + + A+++ EM D+G +
Sbjct: 526 NGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFI 585
Query: 405 PSTGT 409
GT
Sbjct: 586 ADVGT 590
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 141/367 (38%), Gaps = 72/367 (19%)
Query: 244 CQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVE-MERVLKEIVAEGFSPD 301
C ++ A + FN M K L ++ + ++S K+GQ + + + K++ G SP+
Sbjct: 73 CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
T S LI R+D A V + + G P + +I+ VG F + M+ +
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192
Query: 362 GMSSYNCEPNMDTYTRLISGLL-----------------------------------KSR 386
M + C P++ TYT +I+GL K R
Sbjct: 193 DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDR 252
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+V +AL++F M +GI P T S ++ LC++ A + + R + + +
Sbjct: 253 RVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFN 312
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSD--------------GEI------------- 479
+L+ + GK + M E G D E+
Sbjct: 313 VLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK 372
Query: 480 --------YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
Y +I G C + +++ A + E + +G P+ + Y+ L + L L A
Sbjct: 373 GCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREA 432
Query: 532 YNLFRKI 538
NLF+ +
Sbjct: 433 RNLFKNM 439
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 193/401 (48%), Gaps = 6/401 (1%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+V+ + ++ + ++ S+ +++K F + + K G +P L T S ++
Sbjct: 94 VVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLL 153
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVL 264
+V +A+ ++ K + + ++ LC+ V A +L + M + +
Sbjct: 154 HGLCVEDRVSEALHFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQ 209
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIV-AEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
N +TY ++ G K+G V +L+++ P+ + +S +I+GL + GR DA
Sbjct: 210 PNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQN 269
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+F M+EKG P+ YN +I+ + S G + E + + M P++ T++ LI+ L+
Sbjct: 270 LFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALV 329
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
K K +A E++ EML RGI+P+T T S ++ AA M+ GC +
Sbjct: 330 KEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVI 389
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
+ +L+ G + + L HEM G ++ Y +I G C +G L A+ +++E
Sbjct: 390 TFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEM 449
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
+ G CP+ + + L + L + KL+ A +F+ ++ ++ +
Sbjct: 450 ISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMD 490
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 189/420 (45%), Gaps = 47/420 (11%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +V Y+ I+ L + N+ S+M ++G++P+L T + +++ F +G+ +A
Sbjct: 244 IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQ 303
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++L + + + D + +V++ L + A L+N M + ++ N +TYN +I G+
Sbjct: 304 RLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGF 363
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
SK ++ ER+ + +G SPD +TFS LI+G A R+DD +++ M +G +T
Sbjct: 364 SKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANT 423
Query: 338 NAYNAVISNYISVGDFDECMKYYKGM-SSYNC---------------------------- 368
Y +I + +G+ + + + M SS C
Sbjct: 424 ITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKV 483
Query: 369 -----------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
EP++ TY LI GL+ K ++A E++EEM RG+VP T T
Sbjct: 484 MQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYN 543
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
S ++ LC A M+ G + + L+ G+ G L+++ EM
Sbjct: 544 SVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRR 603
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G ++ Y +I G C +G + A+ + +E + G P + + L + +L+ A
Sbjct: 604 GIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 663
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 167/352 (47%), Gaps = 14/352 (3%)
Query: 159 VAKDVKSYNVIVKALGRR-KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
++ DV +++V++ AL + KFF+ + ++M G+ P+ T + ++D F + ++ A
Sbjct: 314 MSPDVVTFSVLINALVKEGKFFEAE-ELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAA 372
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISG 276
+M + G D + ++++ C V L + M + L N +TY +I G
Sbjct: 373 ERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHG 432
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE------ 330
+ +LG + +L+E+++ G P+ +T + L++GL G++ DA+E+F M++
Sbjct: 433 FCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLD 492
Query: 331 -----KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
PD YN +I I+ G F E + Y+ M P+ TY +I GL K
Sbjct: 493 ASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQ 552
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
++ +A ++F+ M +G P T T+ + C G + ++ + + G + Y
Sbjct: 553 SRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITY 612
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
+ L+ G LD++ EM SG D ++ GL + +L+ AV
Sbjct: 613 RTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAV 664
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 139/282 (49%), Gaps = 14/282 (4%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
+F+ A K + DV ++++++ K D +L +M++ G+ + T + ++
Sbjct: 375 MFYLMATK--GCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHG 432
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL--- 264
F + G + A+ +L + G+ + + N +L LC + A +F M+ +
Sbjct: 433 FCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLD 492
Query: 265 ----FN-----VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
FN V TYNI+I G G+ E E + +E+ G PD++T++ +I+GL +
Sbjct: 493 ASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQ 552
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
R+D+A ++FD+M KG PD + +I+ Y VG + ++ + M N TY
Sbjct: 553 SRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITY 612
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
LI G + + AL++F+EM+ G+ P T TI + L L
Sbjct: 613 RTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 654
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 114/243 (46%), Gaps = 12/243 (4%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y ++ + + ++L +M GV P++ T + ++D G++ A++M +
Sbjct: 425 TYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVM 484
Query: 225 EDFGLKFDA-----------ESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
+ + DA ++ N+++ L A L+ M + L + +TYN
Sbjct: 485 QKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNS 544
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
VI G K ++ E ++ + ++GFSPD +TF+ LI G + GR+ D +EVF M +G
Sbjct: 545 VIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRG 604
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
+ Y +I + VG+ + + ++ M S P+ T +++GL ++ A+
Sbjct: 605 IVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAV 664
Query: 393 EVF 395
+
Sbjct: 665 QCL 667
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 84/195 (43%), Gaps = 4/195 (2%)
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
S + + D+ + + M P + + +L+ +++ + + + +M R I
Sbjct: 49 SGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIP 108
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
+ + T ++ CS A+ + K K+G SL + LL L + L
Sbjct: 109 CNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHF 168
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+H++ + + + ++ GLC G++ AV +++ + G P+++ Y + + +
Sbjct: 169 FHQICKPNVIA----FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCK 224
Query: 525 SNKLESAYNLFRKIK 539
SA NL RK++
Sbjct: 225 MGDTVSALNLLRKME 239
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 196/437 (44%), Gaps = 41/437 (9%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF + P V +N ++ A+ R + D + ++ M ++ + D+ + +I
Sbjct: 64 DAIDLFSDMLRSRP--LPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++ F ++ A+ G+L GL D + +L LC V A LF+ +
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRP- 180
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF------------------ 305
+V+T+ +++G + G+VVE +L +V G PD +T+
Sbjct: 181 --DVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238
Query: 306 ------------------SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
S +I+GL + GR D+ +F M++KG P+ YN +I +
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
G + + + M PN+ TY LI+ +K K +A E+++EML RGI+P+T
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 358
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T S ++ C AA M+ GC + + L+ G + ++L HE
Sbjct: 359 ITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHE 418
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
M G ++ Y +I G C +G L A+ + ++ + G CP + + L + L + K
Sbjct: 419 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 478
Query: 528 LESAYNLFRKIKIARQN 544
L+ A +F+ ++ ++ +
Sbjct: 479 LKDALEMFKAMQKSKMD 495
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 185/431 (42%), Gaps = 47/431 (10%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
++ +V Y+ I+ L + N+ +M +G+ P++ T + ++ F +G+ A
Sbjct: 248 HIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAA 307
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
++L + + + + + N ++ + A+ L++ M + ++ N +TYN +I G
Sbjct: 308 QRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG 367
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K ++ E + + +G SPD TF+ LI+G A RIDD +E+ M +G +
Sbjct: 368 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 427
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGM-SSYNC--------------------------- 368
T YN +I + VGD + + + M SS C
Sbjct: 428 TVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 487
Query: 369 ------------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
EP++ TY LI GL+ K +A E++EEM RGIVP T T
Sbjct: 488 AMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITY 547
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+S ++ LC A M+ ++ + L+ G+ L+L+ EM
Sbjct: 548 SSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGR 607
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G +D IY +I G +G + A+ + +E + G P + + + +LE
Sbjct: 608 RGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELER 667
Query: 531 AYNLFRKIKIA 541
A + ++++
Sbjct: 668 AVAMLEDLQMS 678
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 135/279 (48%), Gaps = 14/279 (5%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
+F+ A K + DV ++ ++ K D +L +M + G+ + T + ++
Sbjct: 380 MFYLMATK--GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHG 437
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL--- 264
F G + A+ + ++ G+ D + N +L LC + A +F +M+ +
Sbjct: 438 FCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 497
Query: 265 ----FN-----VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
FN V+TYNI+I G G+ +E E + +E+ G PD++T+S +I+GL +
Sbjct: 498 ASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 557
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
R+D+A ++F +M K P+ +N +I+ Y G D+ ++ + M + Y
Sbjct: 558 SRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIY 617
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
LI G K + AL++F+EM+ G+ P T TI + L
Sbjct: 618 ITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 656
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 180/370 (48%), Gaps = 26/370 (7%)
Query: 183 CN-VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLW 241
CN +LS + KE N D+E VY+ +M+ R ++ + S N+V+
Sbjct: 123 CNPLLSGLVKESENGDMEF-------------VYR--EMIKR----KIELNVISFNIVVN 163
Query: 242 CLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEM---ERVLKEIVAEG 297
LC+ + A + MK V NV+TYN +I G+ K+G++ +M + +LKE+VA+G
Sbjct: 164 GLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKG 223
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
P+ +T++ LI+G + + A+ VF M+ +G P+ YN +I+ S G DE +
Sbjct: 224 ICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAV 283
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
M S + EPN+ T+ LI+G K++ V +A+ +F +M +G+ P+ T T+ ++
Sbjct: 284 ALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAY 343
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
C G A +Y G ++ Y L+ L G L +EM +D
Sbjct: 344 CKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADV 403
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
Y +I LC G+ AV +++E KG PS + Y+ L + L +A L +
Sbjct: 404 VTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAA--LIVR 461
Query: 538 IKIARQNDYA 547
++ R+ A
Sbjct: 462 TRMERKGKQA 471
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 177/366 (48%), Gaps = 4/366 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI---RAGQVYKAI 218
+V S+N++V L + + +V+ DM GV+P++ T + ++D + R G++YKA
Sbjct: 154 NVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKAD 213
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+L + G+ + + N+++ C+ +V A +F M+ + L NV+TYNI+I+G
Sbjct: 214 AILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGL 273
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
G+V E + ++V+ P+ +T + LI G + +++AI +F+ M+++G P+
Sbjct: 274 CSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNA 333
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +I Y G ++ Y M P + TY LI+GL + V A + E
Sbjct: 334 MTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNE 393
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ + + T ++ LC G A+ + + + G S Y L+ G
Sbjct: 394 MVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGN 453
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L + M+ G ++ + +I G C G+LE+A ++ E L +G P+R Y
Sbjct: 454 LRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEI 513
Query: 518 LSNKLL 523
+ +++
Sbjct: 514 IKEEMM 519
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 137/283 (48%), Gaps = 4/283 (1%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
N+SG AM +F ++ + +V +YN+++ L D + M + P++
Sbjct: 243 NVSG-AMRVF--GEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVV 299
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
T +++++ F + V +AI + +E G+ +A + ++ C+ + A +L+N M
Sbjct: 300 THNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMM 359
Query: 260 KGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+ +F V TYN +I+G + G V ++ E+V++ S D +T++ LI+ L + G
Sbjct: 360 IDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGES 419
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
A+++ D M EKG P YN ++ Y G+ + M + N+ T+ L
Sbjct: 420 RKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVL 479
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
I G ++ DA + EML+RG+VP+ T E + G
Sbjct: 480 IKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKG 522
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 125/251 (49%), Gaps = 21/251 (8%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PNV ++NV++ + K + N+ +DM K+GV+P+ T + ++D++ + G++
Sbjct: 295 EPNVV----THNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRME 350
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVI 274
A + + D G+ + + N ++ LC++ V AA SL N M K L +V+TYNI+I
Sbjct: 351 DAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILI 410
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
K G+ + ++L E+ +G +P +T++ L++G R G + A+ V M+ KG
Sbjct: 411 DSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQ 470
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
+ +N +I + G ++ M PN TY ++K
Sbjct: 471 ANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYE-----IIK---------- 515
Query: 395 FEEMLDRGIVP 405
EEM+++G VP
Sbjct: 516 -EEMMEKGFVP 525
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 130/277 (46%), Gaps = 3/277 (1%)
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
++++ N ++SG K + +ME V +E++ + ++F+ ++ GL + G+++ A +V
Sbjct: 118 LSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDV 177
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK---YYKGMSSYNCEPNMDTYTRLISG 381
+ MK G P+ YN +I Y +G + K K M + PN TY LI G
Sbjct: 178 IEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDG 237
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
K V+ A+ VF EM +G+ P+ T + LCS G A+ + + + +
Sbjct: 238 FCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPN 297
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ + +L+ ++L+++M++ G + Y +I C G++E+A +
Sbjct: 298 VVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYN 357
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ +G P Y+ L L +++A +L ++
Sbjct: 358 MMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEM 394
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V +YN ++ L R+ +++++M + ++ D+ T +I++DS + G+ KA+++L
Sbjct: 367 EVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLL 426
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSK 279
+ + GL + N ++ C+ ++ AA + M KGK NV+T+N++I G+
Sbjct: 427 DEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQA-NVVTHNVLIKGFCL 485
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
G++ + +L E++ G P+ T+ + E + G + D
Sbjct: 486 KGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFVPD 526
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 105/248 (42%), Gaps = 3/248 (1%)
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
+ F +S+ L+ R +I E F + G + N ++S + +
Sbjct: 78 GDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENG 137
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ Y+ M E N+ ++ +++GL K K+ A +V E+M G+ P+ T + +
Sbjct: 138 DMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLI 197
Query: 415 EPLCS---YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
+ C G + A + K+ G + Y +L+ + ++ EMQ
Sbjct: 198 DGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQ 257
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G + Y +I GLC+ G+++ AV + ++ + P+ + ++ L N + + A
Sbjct: 258 GLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEA 317
Query: 532 YNLFRKIK 539
NLF ++
Sbjct: 318 INLFNDME 325
>gi|449511317|ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 204/427 (47%), Gaps = 7/427 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLS-GEAM--VLFFNWAIKHPNVAKDVKSYNVIVKA 172
++ +L + V LS +++ V+ R S G + + FFN+ K S + ++
Sbjct: 58 MKHSLESSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTAKRRGFYHTSFSVDTMLYI 117
Query: 173 LGRRKFFDFMCNVLSDMA-KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF 231
LGR + FD + +VL D+ K+ L T+ +V+ + V + ++ + + F +F
Sbjct: 118 LGRSRKFDKIWDVLLDVKFKDPSLISLRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEF 177
Query: 232 DAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLK 291
D N +L LCQ + A ++++ +K N+ T+NI++SGW E E
Sbjct: 178 DVTCFNALLRTLCQEKSMMDARNVYHGLKSMFRPNLQTFNILLSGWK---SSEEAEGFFD 234
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
E++ G PD ++++ L++ + +D A +V M+++ D Y ++I VG
Sbjct: 235 EMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSIIGGLGLVG 294
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
D+ K M Y C P++ Y I ++++ +A ++ +EM+++G+ P+ T
Sbjct: 295 QPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLSPNATTYN 354
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
F +A +Y++ GC + + L+R + K M L+LW++M +
Sbjct: 355 LFFRIFFWSNDLQSAWNLYRRMMDTGCLPNTQSCLFLVRLFKKYEKEEMALELWNDMIQK 414
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G+ S + E + LC++G+L A + + KG PS + ++ + +NK E+
Sbjct: 415 GFGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKPSYTSFKRIKVLMELANKHEAL 474
Query: 532 YNLFRKI 538
NL +K+
Sbjct: 475 QNLSKKM 481
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 201/444 (45%), Gaps = 13/444 (2%)
Query: 99 EERLRGVF--LQKLKGKGVIED-ALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIK 155
E R+ G + ++KG + D L+NV +D GK GN+ M F +K
Sbjct: 230 EGRVEGALALVDEVKGSCLEPDIVLYNV----CIDCFGKA---GNVD---MAWKFFHELK 279
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
+ D SY ++ L + + M E P + ++ + AGQ
Sbjct: 280 SQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFE 339
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVIS 275
A ++L +L++ G S N +L CL ++ V A +LF +MK N TYNI+I
Sbjct: 340 NAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIID 399
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G+V E + E+ G P+ LT + +++ L +A + + A E+F+T ++GC P
Sbjct: 400 MLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNP 459
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
++ Y ++I G+ D+ + ++ M N YT LI + D ++F
Sbjct: 460 NSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIF 519
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
+EM RG P + ++++ + G +++ + G + +Y +L+ L+
Sbjct: 520 KEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKA 579
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
G+ ++H M++ G+ D Y V+ G C G+L+ A V+EE K P+ Y
Sbjct: 580 GQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATY 639
Query: 516 SKLSNKLLASNKLESAYNLFRKIK 539
+ + L ++L+ AY LF + K
Sbjct: 640 GSIIDGLAKIDRLDEAYMLFEEAK 663
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 123/563 (21%), Positives = 235/563 (41%), Gaps = 62/563 (11%)
Query: 14 LSSLSSSFSLFSFSTSVRSNLSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPN 73
LS F +V +YN ++ + + +L +L + I S SF +
Sbjct: 303 LSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNS 362
Query: 74 VYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVG 133
+ + + R VDE L + +K + +N+ +D+ L + G
Sbjct: 363 I--------LTCLGKKRKVDEAL--------TLFEAMKKDAEPNSSTYNIIIDM-LCMAG 405
Query: 134 KVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG 193
KV + E ++H + ++ + N++V L + K F+ + ++ G
Sbjct: 406 KVEEAYMIRDE---------MEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRG 456
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQ-------------------------MLGRLED-- 226
NP+ T ++D + G V A + M GR ED
Sbjct: 457 CNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGH 516
Query: 227 --------FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGW 277
G + D LN + C+ + V ++F +KG L +V +Y+I+I G
Sbjct: 517 KIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGL 576
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+K GQ E + + +GF+ D+ ++ +++G ++G++D A EV + MK K P
Sbjct: 577 TKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTV 636
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y ++I + DE ++ S E N+ Y+ LI G K ++ +A + EE
Sbjct: 637 ATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEE 696
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ +G+ P+ T S ++ L + A++ ++ +++ C + Y +L+ L K
Sbjct: 697 MMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 756
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
W EMQ+ G + Y +IAGL +G + +A + E G P ++
Sbjct: 757 YNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNA 816
Query: 518 LSNKLLASNKLESAYNLFRKIKI 540
L + +N+ AY++F + ++
Sbjct: 817 LIEGMSHANRAIEAYHVFEETRL 839
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 178/416 (42%), Gaps = 37/416 (8%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V + +V+AL R + ++ ++ + PD+ ++ +D F +AG V A +
Sbjct: 217 VPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFH 276
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLG 281
L+ GLK D S ++W LC+ + A LF M+ + + YN +I G+ G
Sbjct: 277 ELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAG 336
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
Q ++L ++ G P ++F+ ++ LG+ ++D+A+ +F+ MK K P+++ YN
Sbjct: 337 QFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMK-KDAEPNSSTYN 395
Query: 342 AVI-------------------------SNYISVG----------DFDECMKYYKGMSSY 366
+I N ++V F+ + ++ S
Sbjct: 396 IIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQR 455
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
C PN TY LI GL K V DA +FE MLD G + TS + +G
Sbjct: 456 GCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDG 515
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
++K+ + GC+ LT + + G ++ +++ G+ D Y +I G
Sbjct: 516 HKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHG 575
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
L GQ + ++GF Y+ + + S KL+ AY + ++K+ R
Sbjct: 576 LTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKR 631
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 155/324 (47%), Gaps = 1/324 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ +M + G PDL L+ MD +AG V K + ++ +G D S ++++ L
Sbjct: 518 IFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLT 577
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ SS+F++MK + + YN V+ G+ K G++ + VL+E+ + P
Sbjct: 578 KAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVA 637
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T+ +I+GL + R+D+A +F+ K KG + Y+++I + VG DE + M
Sbjct: 638 TYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEM 697
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
PN+ T+ L+ L+K+ ++ +AL F+ M + P+T T + + LC
Sbjct: 698 MKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKY 757
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
+ A + +++ +K G ++ Y ++ L+ G L+ + +G D + +
Sbjct: 758 NKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNAL 817
Query: 484 IAGLCNIGQLENAVLVMEESLRKG 507
I G+ + + A V EE+ KG
Sbjct: 818 IEGMSHANRAIEAYHVFEETRLKG 841
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 154/301 (51%), Gaps = 1/301 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
IK DV+SY++++ L + ++ M ++G D + V+D F ++G+
Sbjct: 557 IKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGK 616
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
+ KA ++L ++ + + ++ L + + A LF K K + NV+ Y+
Sbjct: 617 LDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSS 676
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G+ K+G++ E +L+E++ +G +P+ T++ L++ L +A I++A+ F +MKE
Sbjct: 677 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMK 736
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
C P+T Y+ +I+ V +++ +++ M PN+ TYT +I+GL K + DA
Sbjct: 737 CSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDAC 796
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+FE G P + + +E + A ++++ R GC++++ A LL L
Sbjct: 797 SLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDAL 856
Query: 453 S 453
+
Sbjct: 857 N 857
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 124/267 (46%), Gaps = 1/267 (0%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
Y ++I ++ Q +L+++ G+ F+ L+ L R GR++ A+ + D +
Sbjct: 184 AYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEV 243
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
K PD YN I + G+ D K++ + S +P+ +YT +I L K+ ++
Sbjct: 244 KGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRL 303
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
++A E+F +M VP + + S G A + + ++ GC S+ ++ +
Sbjct: 304 SEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSI 363
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L L K L L+ M++ P + Y +I LC G++E A ++ +E G
Sbjct: 364 LTCLGKKRKVDEALTLFEAMKKDAEP-NSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGL 422
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLF 535
P+ L + + ++L + K E AY +F
Sbjct: 423 FPNLLTVNIMVDRLCKAKKFEPAYEMF 449
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/405 (20%), Positives = 157/405 (38%), Gaps = 70/405 (17%)
Query: 169 IVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
+V AL R + D V++ M + P ++++ + A Q +A+++L ++++ G
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212
Query: 229 LKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMER 288
+ ++ L + V A +L + +KG L
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCL------------------------ 248
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD------------ 336
PD + ++ I+ G+AG +D A + F +K +G PD
Sbjct: 249 ----------EPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLC 298
Query: 337 -----------------------TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
AYN +I Y S G F+ K + C P++
Sbjct: 299 KAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVV 358
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
++ +++ L K RKV +AL +FE M + P++ T ++ LC G A M+ +
Sbjct: 359 SFNSILTCLGKKRKVDEALTLFEAM-KKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEM 417
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
G +L +++ RL K +++ + G + Y +I GL G +
Sbjct: 418 EHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNV 477
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++A + E L G + +VY+ L + E + +F+++
Sbjct: 478 DDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEM 522
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 1/239 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K V V +Y I+ L + D + + +G+ ++ S ++D F + G+
Sbjct: 627 MKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGR 686
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNI 272
+ +A +L + GL + + N ++ L + + A F SMK K N TY+I
Sbjct: 687 IDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSI 746
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I+G ++ + + +E+ +G P+ +T++ +I GL + G I DA +F+ K G
Sbjct: 747 LINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANG 806
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
PD ++NA+I E ++ C N+ L+ L K+ + A
Sbjct: 807 GTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQA 865
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 112/271 (41%), Gaps = 2/271 (0%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
YN V+ S + ME+VL+E+ G+ + + L+ L R R+DDA V M
Sbjct: 116 AYNAVLPFLSH--DLAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAM 173
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ P +AY +I + ++ + M E + +T L+ L + +V
Sbjct: 174 RRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRV 233
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
AL + +E+ + P ++ G A + + + G K +Y +
Sbjct: 234 EGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSM 293
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L G+ +L+ +M+ Y +I G + GQ ENA ++++ +G
Sbjct: 294 IWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGC 353
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
PS + ++ + L K++ A LF +K
Sbjct: 354 IPSVVSFNSILTCLGKKRKVDEALTLFEAMK 384
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 190/415 (45%), Gaps = 38/415 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV--NPDLETLSIVMDSFIRAGQVYKAIQ 219
DV SYN+++K+L + ++L MA+ G +PD+ + V+D F + G V KA
Sbjct: 183 DVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACD 242
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
+ + G+ D + + V+ LC+ + A + M K VL + TYN +I G+S
Sbjct: 243 LFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYS 302
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
GQ E RV KE+ + PD + + L+ L + G+I +A +VFDTM KG PD
Sbjct: 303 STGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 362
Query: 339 AY-----------------------------------NAVISNYISVGDFDECMKYYKGM 363
+Y N +I Y + G D+ M + M
Sbjct: 363 SYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM 422
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ +P++ TY +I+ L + K+ DA+E F +M+D+G+VP ++ C++G
Sbjct: 423 RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSL 482
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A + + G +L + + ++ L G+ +++ G D +Y +
Sbjct: 483 LKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNML 542
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ G C +G++E A+ V + + G P+ + Y L N +++ +LFR++
Sbjct: 543 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 185/399 (46%), Gaps = 3/399 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA +F A+K N DV SY +++ + M ++ M +G+ P + T ++
Sbjct: 344 EARDVFDTMAMKGQN--PDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNV 401
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
++ ++ G + KA+ + + D G+K + V+ LC+ + A FN M +
Sbjct: 402 LIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQG 461
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
V+ + Y+ +I G+ G +++ + ++ EI+ G D + F +I L + GR+ DA
Sbjct: 462 VVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQ 521
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+FD G PD YN ++ Y VG ++ ++ + M S EPN+ Y L++G
Sbjct: 522 NIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 581
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K ++ + L +F EML +GI PST ++ L G A + + + + G ++
Sbjct: 582 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNK 641
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y ++LR L + L+ E++ D +IAG+ ++E A +
Sbjct: 642 CTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFAS 701
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
R G P + YS + L+ +E A ++F ++ A
Sbjct: 702 ISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNA 740
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 165/387 (42%), Gaps = 45/387 (11%)
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA-----------------ESL 236
++P T +I+MD RA + A+ G+L GL+ DA E+L
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168
Query: 237 -------------------NVVLWCLCQRLHVGAASSLFNSMK--GKVLF-NVMTYNIVI 274
N++L LC + G A L M G V +V+ YN VI
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ K G V + + KE+V G PD +T+S ++ L +A +D A M KG
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN +I Y S G + E ++ +K M + P++ L+ L K K+ +A +V
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F+ M +G P + T L + G ++ G + + +L++
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIK---A 405
Query: 455 FGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
+ CGML + +++EM++ G Y VIA LC IG++++A+ + + +G P
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y L L A L +I
Sbjct: 466 KYAYHCLIQGFCTHGSLLKAKELISEI 492
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 169/381 (44%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+A + ++NV++KA D + ++M GV P + T V+ + R G++ A+
Sbjct: 392 IAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAM 451
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS-MKGKVLFNVMTYNIVISGW 277
+ ++ D G+ D + + ++ C + A L + M + +++ + +I+
Sbjct: 452 EKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNL 511
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
KLG+V++ + + V G PD++ ++ L++G G+++ A+ VFD M G P+
Sbjct: 512 CKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 571
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +++ Y +G DE + ++ M +P+ Y +I GL ++ + A F E
Sbjct: 572 VGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHE 631
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M + GI + T + L L A+ ++K+ R + K+ + ++ + +
Sbjct: 632 MTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 691
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
DL+ + SG Y +I L G +E A + G P + +
Sbjct: 692 VEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNH 751
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ +LL N++ A KI
Sbjct: 752 VVRELLKKNEIVRAGAYLSKI 772
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 183/418 (43%), Gaps = 38/418 (9%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D+ +Y+ +V AL + + D L M +GV PD T + ++ + GQ +A+
Sbjct: 252 IPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAV 311
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
++ + + D +LN ++ LC+ + A +F++M KG+ +V +Y I+++G
Sbjct: 312 RVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNP-DVFSYTIMLNG 370
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG------------------------- 311
++ G +V+M + ++ +G +P TF+ LI+
Sbjct: 371 YATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPH 430
Query: 312 ----------LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
L R G++DDA+E F+ M ++G PD AY+ +I + + G + +
Sbjct: 431 VVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELIS 490
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
+ + ++ + +I+ L K +V DA +F+ ++ G+ P ++ C G
Sbjct: 491 EIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVG 550
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
A+ ++ G + ++ Y L+ G+ L L+ EM + G +Y
Sbjct: 551 KMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYN 610
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I GL G+ A + E G ++ YS + L + + A LF++++
Sbjct: 611 IIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELR 668
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 92/193 (47%), Gaps = 1/193 (0%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
A+ + +V Y +V + D ++ +M ++G+ P +I++D AG
Sbjct: 561 AMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 620
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYN 271
+ A + + G+ + + ++VL L + A LF ++ V +++T N
Sbjct: 621 RTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLN 680
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I+G + +V E + + I G P ++T+S +I L + G +++A ++F +M+
Sbjct: 681 TMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNA 740
Query: 332 GCGPDTNAYNAVI 344
GC PD+ N V+
Sbjct: 741 GCEPDSRLLNHVV 753
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 185/391 (47%), Gaps = 2/391 (0%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FF IK+ + DV SYN+++ L + +DM GV PD+ T +I+ + F
Sbjct: 292 FFCMMIKY-GLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGF 350
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNV 267
G + A +++ R+ GL D + +++ CQ ++ + L M + L ++
Sbjct: 351 RILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSI 410
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TY +++S K G++ E +L E+ G PD LT+S LI GL + G +++AIE+++
Sbjct: 411 VTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEE 470
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M K P++ +A+IS G E Y+ ++ + + Y +I G K
Sbjct: 471 MCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGN 530
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A+ +++++++GI P+ T S + C G A+ + + G + Y
Sbjct: 531 IGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTT 590
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L+ G + D+ HEM+ Y V+ GLC G+L +V +++ +G
Sbjct: 591 LMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARG 650
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P ++ Y+ + ++ L+ A+ L ++
Sbjct: 651 LFPDQITYNTVIQSFCKAHDLQKAFQLHNQM 681
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 179/393 (45%), Gaps = 1/393 (0%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
L F +++ V D+ +YN++ V+ M G+NPDL T +I++
Sbjct: 325 LEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICG 384
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FN 266
+ G + ++ ++ ++ GLK + V+L LC+ + A L + M+ L +
Sbjct: 385 HCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPD 444
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
++TY+++I G K G V E + +E+ ++ P+S S +I GL G I +A FD
Sbjct: 445 LLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFD 504
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
++ + + YN +I Y +G+ E ++ YK + P + T+ LI G K
Sbjct: 505 SVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKG 564
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
K+A+A+++ + + G+VP++ T T+ + C G H+ M + K + Y
Sbjct: 565 KLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYT 624
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
++++ L G+ + L M G D Y VI C L+ A + + L+
Sbjct: 625 VVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQH 684
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
PS + Y+ L N L L+ A L ++
Sbjct: 685 SLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQ 717
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 176/387 (45%), Gaps = 1/387 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
IK V ++ + +++ L R+ L + E P + + + +M F + G
Sbjct: 226 IKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGS 285
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
V A + +GL D S N++L LC + A N M+ V +++TYNI
Sbjct: 286 VDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNI 345
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+ +G+ LG + +V++ ++ G +PD +T++ LI G + G I+++ ++ + M +G
Sbjct: 346 LANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQG 405
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
Y ++S+ G DE + M +P++ TY+ LI GL K V +A+
Sbjct: 406 LKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAI 465
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
E++EEM + I P++ ++ + L G A M + K + Y +++
Sbjct: 466 ELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGY 525
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
+ G G + + ++ E G + +I G C G+L AV +++ G P+
Sbjct: 526 AKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTS 585
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKIK 539
+ Y+ L N + S +++ +++
Sbjct: 586 VTYTTLMNGYCEEGDMHSMFDMLHEME 612
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 160/360 (44%), Gaps = 9/360 (2%)
Query: 180 DFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVV 239
+ +CN D V D+ + ++ RA V+ A+ +L +++ L+ + N +
Sbjct: 155 ELLCNSFRDWDLNNVVWDM-----LACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSL 209
Query: 240 LWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
L+ L H ++N +K V N T I+I G + ++ + L+E E F
Sbjct: 210 LYNL---RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEF 266
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
P ++F+ L+ G + G +D A F M + G PD +YN ++ G +E ++
Sbjct: 267 GPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALE 326
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
+ M ++ EP++ TY L +G ++ A +V + ML G+ P T T + C
Sbjct: 327 FTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHC 386
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
G + + +K G KLS+ Y +LL L G+ + L HEM+ G D
Sbjct: 387 QMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLL 446
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y +I GLC G +E A+ + EE K P+ V S + + L + A F +
Sbjct: 447 TYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSV 506
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 162/409 (39%), Gaps = 36/409 (8%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ +Y V++ +L + D +L +M G+ PDL T S+++ + G V +AI++
Sbjct: 410 IVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYE 469
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK------VLFNVM-------- 268
+ + ++ + ++ L ++ + A F+S+ +L+N+M
Sbjct: 470 EMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLG 529
Query: 269 ----------------------TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
T+N +I G+ K G++ E ++L I G P S+T++
Sbjct: 530 NIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYT 589
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
L+ G G + ++ M+ K P Y V+ G E ++ K M +
Sbjct: 590 TLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYAR 649
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
P+ TY +I K+ + A ++ +ML + PS T + LC YG A
Sbjct: 650 GLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDA 709
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ + +L+ AY +++ G L +H+M E G+ Y VI
Sbjct: 710 DRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINR 769
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
LC + +A L G P + + + N S S + +F
Sbjct: 770 LCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIF 818
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 121/285 (42%), Gaps = 1/285 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
I ++ + ++N ++ ++ +L + G+ P T + +M+ + G
Sbjct: 541 IIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGD 600
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
++ ML +E +K + VV+ LC+ + + L M + LF + +TYN
Sbjct: 601 MHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNT 660
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
VI + K + + ++ +++ P +T++ LI GL G + DA + T++++
Sbjct: 661 VIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQS 720
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
AY +I + + GD + ++ M E ++ Y+ +I+ L K + DA
Sbjct: 721 IRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAK 780
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
F ML GI P L G P++ ++ K G
Sbjct: 781 FFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCG 825
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 129/315 (40%), Gaps = 52/315 (16%)
Query: 236 LNVVLW----CLCQRLHVGAASSLFNSMKGKVL---FNVMTYNIVISGWSKLGQVVEMER 288
LN V+W C R + +LF K KVL ++ TYN S L M
Sbjct: 166 LNNVVWDMLACAYSRAEM-VHDALFVLAKMKVLNLQVSIATYN---SLLYNLRHTDIMWD 221
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
V EI A G + T LI+GL R R+ DA+ + GP ++NA++S +
Sbjct: 222 VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFC 281
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTG 408
+G D ++ M Y P++ +Y L+ GL + + +ALE +M + G+ P
Sbjct: 282 KMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPD-- 339
Query: 409 TITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM 468
+ Y +L +GF G++ W +
Sbjct: 340 ---------------------------------IVTYNILA---NGFRILGLISGAWKVV 363
Query: 469 QE---SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
Q +G D Y +I G C +G +E + + E+ L +G S + Y+ L + L S
Sbjct: 364 QRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKS 423
Query: 526 NKLESAYNLFRKIKI 540
+++ A L ++++
Sbjct: 424 GRIDEAVILLHEMEV 438
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 109/230 (47%), Gaps = 11/230 (4%)
Query: 182 MCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLW 241
M ++L +M + + P T ++V+ + G++++++Q+L + GL D + N V+
Sbjct: 604 MFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQ 663
Query: 242 CLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
C+ + A L N M + + + +TYN++I+G G + + +R+L + +
Sbjct: 664 SFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRL 723
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS-----NYISVGDFDE 355
+ ++ +I+ G + +A+ F M E+G Y+AVI+ N I+ F
Sbjct: 724 TKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFF 783
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
CM M ++ P+ D +++ +S E+F M+ G++P
Sbjct: 784 CM-----MLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 198/398 (49%), Gaps = 13/398 (3%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K + DV SY ++ ++ + ++M G+ PD+ T S+++D + G+
Sbjct: 328 MKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGK 387
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
V +A ++L + G D + ++ LC + + A+ LF M K + NV+T
Sbjct: 388 VIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCAT 447
Query: 273 VISGWSKLGQV---VEMER-VLKEIVAEGFS--PDSLTFSFLIEGLGRAGRIDDAIEVFD 326
++ G + G + +E+ + +L + G + P+++++S +I+GL + GR D+A E+F
Sbjct: 448 LMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFK 507
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
MK G PD +Y ++I + G + + + M +P++ T++ LI L K
Sbjct: 508 EMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEG 567
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
KV +A E+ E M+ RG +P+T T T+ ++ LC A ++ K +K+GC + Y
Sbjct: 568 KVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYG 627
Query: 447 LLLRRLSGFGKCGMLLDLWHEM-QESG-----YPSDGEIYEYVIAGLCNIGQLENAVLVM 500
L++ L G L+L +M ++G + D Y +I GLC G+ + A +
Sbjct: 628 TLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELF 687
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+E G P+ + Y+ L + S KLE A +LF ++
Sbjct: 688 KEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEM 725
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 172/352 (48%), Gaps = 19/352 (5%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ-- 219
DV + +VK L + + M K G P++ T + +M ++G + A++
Sbjct: 406 DVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELH 465
Query: 220 --MLGRLEDFGL--KFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVI 274
ML +G+ K +A S ++++ LC+ A LF MK V+ +V++Y +I
Sbjct: 466 KNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLI 525
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ + G+ + + + E+V G PD TFS LI+ L + G++ +A E+ + M ++GC
Sbjct: 526 HGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCI 585
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+T Y ++ E + + M C P++ TY L+ GL ++ + ALE+
Sbjct: 586 PNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALEL 645
Query: 395 FEEML-DRG-----IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
++ML D G P + + ++ LC +G A ++K+ + +G ++ +Y L
Sbjct: 646 HKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSL 705
Query: 449 LRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
+ GF + G L D L++EM + G + Y +I G C GQ++ A+
Sbjct: 706 IH---GFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 188/406 (46%), Gaps = 14/406 (3%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K + DV SY ++ R ++ + ++M G+ D+ T S+++D + G+
Sbjct: 147 MKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGK 206
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
V +A ++L + G D + + ++ LC + + A+ LF SM K + + Y
Sbjct: 207 VIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGT 266
Query: 273 VISGWSKLGQVVEMERVLKEIVAEG------FSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
++ G + G + ++ +E++ + P +++S +I+GL + R D+A E+F
Sbjct: 267 LMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFK 326
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
MK +G PD +Y +I + G +++ + M +P++ T + LI L K
Sbjct: 327 EMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKG 386
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
KV +A ++ E ++ RG +P T T+ ++ LC A ++ K +K+GC ++
Sbjct: 387 KVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCA 446
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYP------SDGEIYEYVIAGLCNIGQLENAVLVM 500
L++ L G + L+L M P + Y +I GLC G+ + A +
Sbjct: 447 TLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELF 506
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK-IKIARQND 545
+E G P + Y+ L + S K + A LF + + I Q D
Sbjct: 507 KEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPD 552
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 183/394 (46%), Gaps = 19/394 (4%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ-- 219
D+ +Y+ ++K L + + M K G PD +M + G + A+Q
Sbjct: 225 DIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLH 284
Query: 220 --MLGRLEDFGLKFDAE--SLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
ML +G+K S ++++ LC+ A LF MK + ++ +V++Y +I
Sbjct: 285 QEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLI 344
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ G+ + + + E++ G PD T S LI+ L + G++ +A ++ + + ++GC
Sbjct: 345 HGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCI 404
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD ++ + + + M C PN+ T L+ GL +S + ALE+
Sbjct: 405 PDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALEL 464
Query: 395 FEEMLDR----GI--VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+ ML GI P+ + + ++ LC G A ++K+ + +G + +Y L
Sbjct: 465 HKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSL 524
Query: 449 LRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+ GF + G D L++EM + G D + +I LC G++ A ++E ++
Sbjct: 525 IH---GFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQ 581
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+G P+ + Y+ L L ++++ A LF K++
Sbjct: 582 RGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQ 615
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 168/363 (46%), Gaps = 13/363 (3%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M G+ PD+ T +++D F + G+V +A ++L + G D + + ++ LC +
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 249 VGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG------FSPD 301
+ A+ LF SMK + + Y ++ G + G++ + +E++ + P
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+++S +I+GL + R D+A E+F MK +G PD +Y ++I + G +++ +
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M ++ T + LI L K KV +A E+ E M+ RG + T ++ ++ LC
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES----GYPSDG 477
A ++ +K+GC+ AY L++ L G L L EM G
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300
Query: 478 EI--YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ Y +I GLC + + A + +E +G P + Y+ L + S K E A LF
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 360
Query: 536 RKI 538
++
Sbjct: 361 NEM 363
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 133/277 (48%), Gaps = 7/277 (2%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N + SY++I+ L + D + +M GV PD+ + + ++ F R+G+ A
Sbjct: 478 NCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDA 537
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
+ + D G++ D + +V++ LC+ V A+ L M + + N +TY ++ G
Sbjct: 538 KYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKG 597
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM----KEKG 332
++ E ++ ++ G PD +T+ L++GL + G I A+E+ M + G
Sbjct: 598 LCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYG 657
Query: 333 CG--PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
PD +Y+ +I G DE + +K M + PN+ +YT LI G +S K+ D
Sbjct: 658 TNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLED 717
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
A +F EM+D+G+ + T + + C G A+
Sbjct: 718 AKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 123/252 (48%), Gaps = 9/252 (3%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K V DV SY ++ R + + ++M GV PD+ T S+++D + G+
Sbjct: 509 MKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGK 568
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
V +A ++L + G + + ++ LC + A+ LF M K L +V+TY
Sbjct: 569 VIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGT 628
Query: 273 VISGWSKLGQVVEMERVLKEIVAE------GFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
++ G + G + + K+++++ F PD +++S +I+GL + GR D+A E+F
Sbjct: 629 LMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFK 688
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
MK G P+ +Y ++I + G ++ + M + N TY+ +I G K
Sbjct: 689 EMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEG 748
Query: 387 KVADALEVFEEM 398
++ AL F++M
Sbjct: 749 QIDKAL--FQKM 758
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 184/381 (48%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+ +V +YN++++ + +M + G P++ T + ++D++ + ++ +A
Sbjct: 199 VSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAF 258
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++L + GL + S NVV+ LC+ + S + M K + + + +T+N +I+G+
Sbjct: 259 KLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGY 318
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+G + + E+V G SP+ +T++ LI + +AG ++ A+E D M+++G P+
Sbjct: 319 CNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNG 378
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +I + G + + K M P + TY LI+G ++ DA + +E
Sbjct: 379 RTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQE 438
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M++RG +P + ++ + C A + + G + Y L++ L +
Sbjct: 439 MIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRR 498
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
G + DL+ EM G P D Y +I C G L+ A+ + +E ++KGF P + Y+
Sbjct: 499 LGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNV 558
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L N ++ + A L K+
Sbjct: 559 LINGFNKQSRTKEAKRLLLKL 579
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 184/375 (49%), Gaps = 2/375 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ-MLGRL 224
++++VK+ R + ++++ G P + + + ++D+ IR Q K + + +
Sbjct: 135 FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEM 194
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ G+ + + N+++ C ++ F M + L NV+TYN +I + KL ++
Sbjct: 195 VESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKI 254
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E ++L+ + +G +P+ ++++ +I GL R G++ + E+ + M ++ PD +N +
Sbjct: 255 GEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTL 314
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I+ Y +VG+F + + + M PN+ TYT LI+ + K+ + A+E ++M DRG+
Sbjct: 315 INGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL 374
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T T+ ++ G A + K+ + G ++ Y L+ G+
Sbjct: 375 HPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASG 434
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L EM E G+ D Y +I+G C +LE A + E + KG P YS L L
Sbjct: 435 LLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLC 494
Query: 524 ASNKLESAYNLFRKI 538
+L +LF+++
Sbjct: 495 KQRRLGEVCDLFQEM 509
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 199/415 (47%), Gaps = 24/415 (5%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
GEA L A+K N ++ SYNV++ L R +L +M+K PD T +
Sbjct: 255 GEAFKLLRLMALKGLN--PNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFN 312
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK 262
+++ + G ++A+ + + GL + + ++ +C+ ++ A + M+ +
Sbjct: 313 TLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDR 372
Query: 263 VLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
L N TY +I G+S+ G + + +++KE+V GF+P +T++ LI G GR++DA
Sbjct: 373 GLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDA 432
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+ M E+G PD +Y+ +IS + + ++ + M + P++ TY+ LI G
Sbjct: 433 SGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQG 492
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L K R++ + ++F+EML G+ P T TS + C G A+ ++ + + G
Sbjct: 493 LCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPD 552
Query: 442 LTAYKLLLRRLSGFGKCG-------MLLDLWHEMQESGYPSDGEIYE-----------YV 483
+ Y +L+ +GF K +LL L +E + + + +
Sbjct: 553 IVTYNVLI---NGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALAL 609
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ G C G + A V+E L+KG+ + VY+ + + +E AYNL++++
Sbjct: 610 MKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEM 664
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 171/375 (45%), Gaps = 31/375 (8%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV N + KA + +F L M G++P+ T + ++D F + G + +
Sbjct: 341 PNVVTYTTLINSMCKAGNLNRAMEF----LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQ 396
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVIS 275
A Q++ + + G + N ++ C + AS L M + + +V++Y+ +IS
Sbjct: 397 AYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIIS 456
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G+ + ++ + ++ E+VA+G SPD T+S LI+GL + R+ + ++F M G P
Sbjct: 457 GFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPP 516
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D Y ++I+ Y GD D+ ++ + M P++ TY LI+G K + +A +
Sbjct: 517 DEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL 576
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
++L VP+ T + ++ + + +K A L + GF
Sbjct: 577 LKLLYEESVPNEITYNTLID--------NCNNLEFKSA---------------LALMKGF 613
Query: 456 GKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G++ + + M + GY + E+Y +I G +G +E A + +E L GF P
Sbjct: 614 CMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHS 673
Query: 513 LVYSKLSNKLLASNK 527
+ L+ L K
Sbjct: 674 VTIMALAKSLYHEGK 688
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 116/272 (42%), Gaps = 36/272 (13%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR-IDDAIEVFDT 327
+++V+ +++ + + ++ + GF P L+++ +++ + R + + A +F
Sbjct: 134 VFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKE 193
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M E G P+ YN +I + + G+ + + ++ M C PN+ TY +I K RK
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRK 253
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A ++ M +G+ P+ L +Y +
Sbjct: 254 IGEAFKLLRLMALKGLNPN-----------------------------------LISYNV 278
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
++ L G+ ++ EM + Y D + +I G CN+G A+++ E ++ G
Sbjct: 279 VINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNG 338
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P+ + Y+ L N + + L A +++
Sbjct: 339 LSPNVVTYTTLINSMCKAGNLNRAMEFLDQMR 370
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 92/219 (42%), Gaps = 51/219 (23%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ DV +Y+ +++ L +++ +C++ +M G+ PD T + +++++ G + KA+
Sbjct: 479 ISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKAL 538
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCL----------------------------------C 244
++ + G D + NV++ C
Sbjct: 539 RLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNC 598
Query: 245 QRLHVGAASSLFNS--MKG------KVL---------FNVMTYNIVISGWSKLGQVVEME 287
L +A +L MKG +VL N YN++I G SK+G + +
Sbjct: 599 NNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAY 658
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
+ KE++ GF+P S+T L + L G+ + ++ D
Sbjct: 659 NLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLD 697
>gi|242071011|ref|XP_002450782.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
gi|241936625|gb|EES09770.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
Length = 528
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 183/402 (45%), Gaps = 23/402 (5%)
Query: 156 HP---NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
HP N +Y+ +V AL R + FD V+ D + +G + +++ ++ AG
Sbjct: 110 HPSFVNTRPPPDAYDAVVDALARARQFDAAWRVVVDASADGAA-SPRSFAVLARRYVAAG 168
Query: 213 QVYKAIQMLGRLEDF-GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYN 271
+A++ +E F G + ++ +L LC+ + A+ +FN K K N Y
Sbjct: 169 MTRQAVRAFDDMEAFVGREANSAEFATLLDTLCKYKYPKVATEIFNKRKYKYNPNEKMYT 228
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG------RIDDAI--- 322
I+I GW K+ + + LK+++ G P+ +T++ L+ G+ R R D +
Sbjct: 229 ILIYGWCKVNRNDMARKFLKDMLDHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHSA 288
Query: 323 -EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+V M+++G PD +Y+ ++ Y + C+ ++ M P + TYT +I
Sbjct: 289 EDVLKEMRDRGIEPDVTSYSIILHVYSRAHKPELCVCMFRSMKDRGICPTVATYTSVIKC 348
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L ++ DA + +EM+ G+ PS T F + A+ +Y K ++ G S
Sbjct: 349 LASCGRLEDAETLLDEMVAEGVCPSPATYNCFFKEYRGRNDVSGALQLYNKMKQPG---S 405
Query: 442 LTA-----YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
LTA Y +LL + G + D+W +M ES D + Y +I G C + A
Sbjct: 406 LTAPDIHTYNILLGMFIKLNRHGSVKDIWSDMCESTVGPDLDSYTLLIHGFCASQKWREA 465
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
E + KGF P ++ + L L+ ++ L + L R++
Sbjct: 466 CQFFMEMIEKGFLPQKITFETLYRGLIQADMLRTWRRLKRRV 507
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 123/283 (43%), Gaps = 15/283 (5%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGF-SPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
Y+ V+ ++ Q RV+ + A+G SP S F+ L AG A+ FD
Sbjct: 122 AYDAVVDALARARQFDAAWRVVVDASADGAASPRS--FAVLARRYVAAGMTRQAVRAFDD 179
Query: 328 MKEKGCGPDTNAYN-AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M E G + N+ A + + + + + Y PN YT LI G K
Sbjct: 180 M-EAFVGREANSAEFATLLDTLCKYKYPKVATEIFNKRKYKYNPNEKMYTILIYGWCKVN 238
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP--P--------HAAMMMYKKARKV 436
+ A + ++MLD GI P+ T L +C + P H+A + K+ R
Sbjct: 239 RNDMARKFLKDMLDHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHSAEDVLKEMRDR 298
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G + +T+Y ++L S K + + ++ M++ G Y VI L + G+LE+A
Sbjct: 299 GIEPDVTSYSIILHVYSRAHKPELCVCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDA 358
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+++E + +G CPS Y+ + N + A L+ K+K
Sbjct: 359 ETLLDEMVAEGVCPSPATYNCFFKEYRGRNDVSGALQLYNKMK 401
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 107 LQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSY 166
L++++ +G+ D S ++ V +R + E V F ++K + V +Y
Sbjct: 292 LKEMRDRGIEPDVT-------SYSIILHVYSRAH-KPELCVCMFR-SMKDRGICPTVATY 342
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
++K L + +L +M EGV P T + + V A+Q+ +++
Sbjct: 343 TSVIKCLASCGRLEDAETLLDEMVAEGVCPSPATYNCFFKEYRGRNDVSGALQLYNKMKQ 402
Query: 227 FG--LKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
G D + N++L + G+ +++ M + V ++ +Y ++I G+ +
Sbjct: 403 PGSLTAPDIHTYNILLGMFIKLNRHGSVKDIWSDMCESTVGPDLDSYTLLIHGFCASQKW 462
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
E + E++ +GF P +TF L GL +A
Sbjct: 463 REACQFFMEMIEKGFLPQKITFETLYRGLIQA 494
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 120/520 (23%), Positives = 236/520 (45%), Gaps = 15/520 (2%)
Query: 25 SFSTSVRSNLSYNELLSN---QKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSN 81
+F T R N + ++ N +KKN +S+ E V+ L + +S S+ + + +N
Sbjct: 68 AFRTITRCNHDNDLVVVNNGKRKKNKTSVSEEEVMTILKSISDPNSAFSYFKIVSQ-LTN 126
Query: 82 SVKRIDSSRAVDEFLLPEERLRG-VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGN 140
V D+ + E L + R+ VF+ L K VI N+ + + + +G
Sbjct: 127 FVHTTDACNYMLEILREQRRIEDMVFVFDLMQKKVIYR-----NLTTYMTIFKALSIKGG 181
Query: 141 LSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
+ L + + SYN ++ L F + V M EG+ P ++T
Sbjct: 182 IGRAPFAL---RKMTEVGFILNAYSYNGLIHLL-LPGFCNEALKVYKRMISEGMKPSMKT 237
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
S +M + R G K + +L ++ GL+ + + + + L + + A +F M
Sbjct: 238 YSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMD 297
Query: 261 GKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
+ +V+TY ++I G++ + + + ++ A SPD +T+ L++ G+ G ++
Sbjct: 298 DEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLE 357
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
++ M+ G PD Y +I GD D M++ PN+ TY +I
Sbjct: 358 TVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMI 417
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
GLLK+R++ +ALE+ E M G+ P+ + F++ G P A+ ++ +K G
Sbjct: 418 CGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIM 477
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
S+ A L L+ G+ D+++++ + G D Y ++ GQ++ A +
Sbjct: 478 PSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQL 537
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ E + KG P ++ + L N L + ++++A+ +F ++K
Sbjct: 538 LSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLK 577
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 174/349 (49%), Gaps = 2/349 (0%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A DV +Y ++++AL + D ++L M +G+ P+L T + ++ ++A ++ +A++
Sbjct: 372 APDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALE 431
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
+L +E G+K A S + + + A F +MK + ++ ++ N + +
Sbjct: 432 LLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLA 491
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
+ G++ E E + ++ G SPDS+T++ L++ +AG+ID A ++ M KGC PD
Sbjct: 492 ETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVM 551
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
N++I+ G D K + + + P + TY L++GL K K+ ALE+F M
Sbjct: 552 IINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSM 611
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+ G P+T T S L+ L A+ M+ + + C + Y ++ L G+
Sbjct: 612 TESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRI 671
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
+H+M++ P D +I G+ G++E+A+ V+ E + +
Sbjct: 672 DYAFWFFHQMKKFLSP-DYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQA 719
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 171/344 (49%), Gaps = 6/344 (1%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F+ K+ + ++SYN ++ L F + + DM G +P+ T ++++D+
Sbjct: 783 FDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHG 842
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS-MKGKVLFNVM 268
++ ++ K + + G + +A + N+++ L + ++ A L+ M G
Sbjct: 843 KSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPC 902
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TY +I G K G+ + ++ +E++ G P+S+ ++ LI G G++G ID A E+F M
Sbjct: 903 TYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKM 962
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
++G PD +Y ++ G DE ++Y++ + +P+ +Y +I+GL KSR++
Sbjct: 963 VKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRL 1022
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+AL +F EM +RGI P T + + L G A+ MY++ + VG + S+ Y L
Sbjct: 1023 DEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNAL 1082
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY-----EYVIAGL 487
+R S G ++ +M G + E + +Y AGL
Sbjct: 1083 IRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGL 1126
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 177/366 (48%), Gaps = 2/366 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKE-GVNPDLETLSIVMDSFIRAGQVYK 216
+V +D ++K L +RK NV K G++P LE+ + +MD + + K
Sbjct: 755 SVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEK 814
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVIS 275
A+++ ++ G + + N++L + + L++ M+ + N +T+NI+IS
Sbjct: 815 ALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIIS 874
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
K + + + E+++ FSP T+ LI+GL +AGR + A+++F+ M + GCGP
Sbjct: 875 ALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGP 934
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
++ YN +I+ + G+ D + +K M P++ +YT L+ L + ++ +A++ F
Sbjct: 935 NSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYF 994
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
EE+ G+ P T + + L A+ ++ + + G L Y L+ L
Sbjct: 995 EELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIA 1054
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
GK + + ++ E+Q G Y +I G G + A V ++ + G P+ +
Sbjct: 1055 GKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETF 1114
Query: 516 SKLSNK 521
++L NK
Sbjct: 1115 AQLPNK 1120
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 189/457 (41%), Gaps = 74/457 (16%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N DV +YN I+ L R D+ M K+ ++PD TL ++ +R G+V A
Sbjct: 650 NCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLSPDYVTLCTLIPGVVRHGRVEDA 708
Query: 218 I----------------QMLGRLEDFGLKF----DAESLNVVLWC--------------- 242
I Q G L + L +A S +L C
Sbjct: 709 IKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIK 768
Query: 243 -LCQRLHVGAASSLFNSMKGKVLFN--VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS 299
LC+R A ++F+ + + + +YN ++ G + + +++ + G
Sbjct: 769 VLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTH 828
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV--------- 350
P++ T++ L++ G++ RI+ +++ M+ +GC P+ +N +IS +
Sbjct: 829 PNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDL 888
Query: 351 ------GDF--------------------DECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
GDF ++ MK ++ M Y C PN Y LI+G K
Sbjct: 889 YYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGK 948
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
S ++ A E+F++M+ GI P + T +E LC G A+ +++ + G +
Sbjct: 949 SGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVS 1008
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y ++ L + L L+ EM+ G D Y +I L G+++ AV + EE
Sbjct: 1009 YNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQ 1068
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
G PS Y+ L S + A+++F+K+ +
Sbjct: 1069 LVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVV 1105
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 36/191 (18%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN+++ G+ DF C + M KEG+ PDL++ +I+++ G++ +A+Q L+
Sbjct: 939 YNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELK 998
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK---------------------GKVL 264
GL D S N ++ L + + A SLF+ MK GKV
Sbjct: 999 LTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVD 1058
Query: 265 F---------------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
+V TYN +I G S G + V K+++ G SP++ TF+ L
Sbjct: 1059 VAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLP 1118
Query: 310 EGLGRAGRIDD 320
RAG + +
Sbjct: 1119 NKYPRAGLVHN 1129
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 103/238 (43%), Gaps = 7/238 (2%)
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
++++E L RI+D + VFD M++K + Y + G + M+
Sbjct: 135 NYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTE 194
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
N +Y LI LL +AL+V++ M+ G+ PS T ++ + L G
Sbjct: 195 VGFILNAYSYNGLIHLLLPGF-CNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRK 253
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW---HEMQESGYPSDGEIYEY 482
M + ++ + +G + ++ Y + +R L G+ + D W EM + G D Y
Sbjct: 254 IMNLLEEMKSIGLRPNIYTYTICIRAL---GRARRIDDAWGIFKEMDDEGCGPDVITYTV 310
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+I LC G+L+ A + + P R+ Y L +K LE+ + ++++
Sbjct: 311 LIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEV 368
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 190/401 (47%), Gaps = 2/401 (0%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+V+ ++ + D+ S+N+++K F + + K G++PD+ T + ++
Sbjct: 97 LVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLL 156
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF 265
+V +A+ ++ + + + + ++ LC+ + A +L + M L
Sbjct: 157 HGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQ 216
Query: 266 NV-MTYNIVISGWSKLGQVVEMERVLKEIV-AEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+TY ++ G K G V +L+++ P+ + +S +I+ L + GR DA
Sbjct: 217 PTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQN 276
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+F M+EKG PD YN++I + S G + + + + M P++ TY LI+ +
Sbjct: 277 LFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFV 336
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
K K +A E+++EML RGI+P+T T S ++ C AA M+ GC +
Sbjct: 337 KEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVF 396
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
+ L+ G + ++L HEM G ++ Y +I G C +G L A+ + ++
Sbjct: 397 TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQM 456
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
+ G CP + + L + L + KL+ A +F+ ++ ++ +
Sbjct: 457 ISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 497
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 188/431 (43%), Gaps = 47/431 (10%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
++ +V Y+ I+ +L + N+ ++M ++G+ PDL T + ++ F +G+ A
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDA 309
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
Q+L + + + D + N ++ + A+ L++ M + ++ N +TYN +I G
Sbjct: 310 EQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG 369
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K ++ E + + +G SPD TF+ LI+G A RIDD +E+ M +G +
Sbjct: 370 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 429
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGM-SSYNC--------------------------- 368
T YN +I + VGD + + + M SS C
Sbjct: 430 TVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 489
Query: 369 ------------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
EP++ TY LI GL+ K +A E++EEM RGIVP T T
Sbjct: 490 AMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITY 549
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+S ++ LC A M+ ++ + L+ G+ L+L+ EM
Sbjct: 550 SSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGR 609
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G +D IY +I G +G + A+ + +E + G P + + + +LE
Sbjct: 610 RGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELER 669
Query: 531 AYNLFRKIKIA 541
A + ++++
Sbjct: 670 AVAMLEDLQMS 680
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 135/279 (48%), Gaps = 14/279 (5%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
+F+ A K + DV ++ ++ K D +L +M + G+ + T + ++
Sbjct: 382 MFYLMATK--GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHG 439
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL--- 264
F G + A+ + ++ G+ D + N +L LC + A +F +M+ +
Sbjct: 440 FCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLD 499
Query: 265 ----FN-----VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
FN V+TYNI+I G G+ +E E + +E+ G PD++T+S +I+GL +
Sbjct: 500 ASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
R+D+A ++F +M K P+ +N +I+ Y G D+ ++ + M + Y
Sbjct: 560 SRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIY 619
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
LI G K + AL++F+EM+ G+ P T TI + L
Sbjct: 620 ITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/170 (19%), Positives = 78/170 (45%)
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P++ + +L+ +++ + + ++++M + I + ++ CS A+
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ K K+G + + LL L + LD +H+M E+ + + ++ GLC
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G++ AV +++ + G P+++ Y + + + SA NL RK++
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKME 246
>gi|255548349|ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545711|gb|EEF47215.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 202/431 (46%), Gaps = 11/431 (2%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLS-GEAM--VLFFNWAIKHPNVAKDVKSYNVIVKA 172
++ +L + + LS D++ KV+ R S G + + FF + S + I+
Sbjct: 55 LKQSLTSTGIFLSNDLIDKVLKRVRFSHGNPLQALEFFYYTDNRKGFYHTPYSLDTILYI 114
Query: 173 LGRRKFFDFMCNVLSDMAKEG---VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGL 229
LGR + FD + +VL M ++ ++P T+ IV+ + V + ++ + + F
Sbjct: 115 LGRSRKFDHIWDVLIKMKRKDRFLISP--RTMQIVLARVAKLCSVRQTVESFRKFKKFVS 172
Query: 230 KFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERV 289
D N +L LCQ + A ++++ +K + N+ T+NI++SGW Q E E
Sbjct: 173 VLDTTCFNALLRTLCQEKSMTDARNVYHRLKKEFKPNLQTFNILLSGWK---QSEEAELF 229
Query: 290 LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYIS 349
+E+ G PD ++++ LI+ + ++ A +V + M+E+ PD Y ++I
Sbjct: 230 FEEMRELGIKPDVVSYNSLIDVYCKDREMEKAYKVVEKMREEDISPDVITYTSIIGGLGL 289
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
VG D+ M Y C P++ Y +I ++++ DA + +EM +G+ P+ T
Sbjct: 290 VGQPDKARDILNEMKEYGCYPDVAAYNAVIRNYCIAKRLGDASNLMDEMASKGLSPNATT 349
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
F + +Y++ + GC + + L+R K M L LW++M
Sbjct: 350 YNLFFRVFYWSNDLRNSWSLYRRMMESGCLPNTQSCMFLIRLFRKHEKVEMALTLWNDMV 409
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
E G+ S + + + LC++G+L A + + KG PS + + ++ + NK +
Sbjct: 410 EKGFGSYILVSDVLFDLLCDMGKLVEAEKCFLQMIEKGHKPSNVSFRRIKVLMELVNKHD 469
Query: 530 SAYNLFRKIKI 540
+ NL +K+ I
Sbjct: 470 ALLNLQKKMAI 480
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 49/272 (18%), Positives = 120/272 (44%), Gaps = 29/272 (10%)
Query: 35 SYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVDE 94
++N LLS K++ + ++EL + S+NS +VY + R ++ + V
Sbjct: 212 TFNILLSGWKQSEEAELFFEEMRELGIKPDVVSYNSLIDVYCKDRE-----MEKAYKV-- 264
Query: 95 FLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAI 154
++K++ + + D + ++ L +VG+ ++ E +
Sbjct: 265 ------------VEKMREEDISPDVITYTSIIGGLGLVGQPDKARDILNE---------M 303
Query: 155 KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV 214
K DV +YN +++ K N++ +MA +G++P+ T ++ F + +
Sbjct: 304 KEYGCYPDVAAYNAVIRNYCIAKRLGDASNLMDEMASKGLSPNATTYNLFFRVFYWSNDL 363
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN-VMTYNIV 273
+ + R+ + G + +S ++ + V A +L+N M K + ++ +++
Sbjct: 364 RNSWSLYRRMMESGCLPNTQSCMFLIRLFRKHEKVEMALTLWNDMVEKGFGSYILVSDVL 423
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
+G++VE E+ +++ +G P +++F
Sbjct: 424 FDLLCDMGKLVEAEKCFLQMIEKGHKPSNVSF 455
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 186/395 (47%), Gaps = 1/395 (0%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+V++ +++ ++ D+ S+ +++ R +L M K G P + TL ++
Sbjct: 622 IVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLL 681
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VL 264
+ F + + +A+ ++ ++ FG + N V+ LC+ + A +F M+ K +
Sbjct: 682 NGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIR 741
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+ +TYN +ISG S G+ + R+L+++V P+ + F+ LI+ + G + +A +
Sbjct: 742 ADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNL 801
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
+ M + P+ YN++I+ + G + + M S C P++ TY LI+G K
Sbjct: 802 YKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCK 861
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
S++V D +++F EM +G+V T + + C G + A ++ + G +
Sbjct: 862 SKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVT 921
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y +LL L GK L + ++Q+S D Y +I GLC +L+ A +
Sbjct: 922 YNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 981
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
RKG P + Y + + L A L R++K
Sbjct: 982 RKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 1016
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 149/309 (48%), Gaps = 1/309 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M K G P++ + ++D + G++ A+++L +E GL D + N +L LC
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 249 -VGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
AA L + MK + +V+T+ +I + K G + E + + KE++ P+++T++
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
+I GL GR+ DA + FD M KGC P+ YN +IS + DE MK ++ MS
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
++ TY LI G + K+ AL++F M+ R + P T L LC G +A+
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+ + R+ + + AY +++ L K +L+ + G D Y +I GL
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 488 CNIGQLENA 496
C G A
Sbjct: 467 CKNGPRREA 475
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 185/406 (45%), Gaps = 3/406 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A LFF P + + ++ A + ++ + M G++ DL + +I
Sbjct: 54 DAFALFFEMVHSQP--LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
++ F R ++ A+ +LG++ G + + +L C +G A SL M K
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
NV+ YN +I G K G++ +L E+ +G D +T++ L+ GL +GR DA
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+ M ++ PD + A+I ++ G+ DE + YK M + +PN TY +I+GL
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
++ DA + F+ M +G P+ T + + C + M ++++ G +
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L+ GK + LD++ M D + ++ GLC G++E+A++ ++
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYAR 548
+ Y+ + + L ++K+E A+ LF ++ + AR
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDAR 457
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 135/287 (47%), Gaps = 1/287 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV +YN ++ L + +L DM K +NPD+ T + ++D F++ G + +A
Sbjct: 207 LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQ 266
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
++ + + + + N ++ LC + A F+ M K F NV+TYN +ISG+
Sbjct: 267 ELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K V E ++ + + EGF+ D T++ LI G + G++ A+++F M + PD
Sbjct: 327 CKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDI 386
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+ ++ G+ + + + M + Y +I GL K+ KV A E+F
Sbjct: 387 ITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCR 446
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+ G+ P T T + LC GP A + ++ ++ G + A
Sbjct: 447 LPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNA 493
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 146/300 (48%), Gaps = 1/300 (0%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
+ ++ + D +YN ++ L + +L DM K ++P++ + ++D+F++
Sbjct: 733 YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 792
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTY 270
G + +A + + + + + N ++ C +G A +F+ M K F +V+TY
Sbjct: 793 GNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY 852
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
N +I+G+ K +V + ++ E+ +G D+ T++ LI G +AG+++ A +VF+ M +
Sbjct: 853 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 912
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
G PD YN ++ + G ++ + + + + ++ TY +I GL ++ K+ +
Sbjct: 913 CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 972
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A +F + +G+ P + + LC G A + ++ ++ G S Y LR
Sbjct: 973 AWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 1032
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 96/189 (50%), Gaps = 1/189 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN ++ + K + + +M +G+ D T + ++ + +AG++ A ++
Sbjct: 848 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 907
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
R+ D G+ D + N++L CLC + A + + K ++ +++TYNI+I G +
Sbjct: 908 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 967
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
++ E + + + +G PD++ + +I GL R G +A ++ MKE G P Y
Sbjct: 968 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 1027
Query: 341 NAVISNYIS 349
+ + ++ +
Sbjct: 1028 DETLRDHYT 1036
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 75/390 (19%), Positives = 166/390 (42%), Gaps = 19/390 (4%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ +YN+++ L + + + + EGV PD T +I++ + G +A +++
Sbjct: 421 IVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIR 480
Query: 223 RLEDFGL--KFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKL 280
R+++ G+ + +AE ++ + + ++ K + M I I+ S +
Sbjct: 481 RMKEEGIICQMNAEDDHLEEHSSSNKEISLSLREIWERSKSNPFW--MQRLIPIAFSSSV 538
Query: 281 GQVVEMERVLKEIVAEGFSPD-SLTFSF-----------LIEGLGRAGRIDDAIEVFDTM 328
V +L E G +P+ SL+ SF + + DDA +F M
Sbjct: 539 KGFVRRHYLLLE---RGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEM 595
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ P + V++ + FD + Y M + ++ ++T LI + ++
Sbjct: 596 LQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRL 655
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+ AL + +M+ G PS T+ S L C A+ + G ++ Y +
Sbjct: 656 SLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTV 715
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L L++++ M++ G +D Y +I+GL N G+ +A ++ + +++
Sbjct: 716 INGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKI 775
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ + ++ L + + L A NL++++
Sbjct: 776 DPNVIFFTALIDTFVKEGNLLEARNLYKEM 805
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/236 (18%), Positives = 90/236 (38%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P + F+ ++ + + + D I ++ M+ G D ++ +I + +
Sbjct: 602 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 661
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
M P++ T L++G + + +A+ + + M G VP+ + + LC
Sbjct: 662 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 721
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
+ A+ ++ K G + Y L+ LS G+ L +M + +
Sbjct: 722 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 781
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ +I G L A + +E +R+ P+ Y+ L N L A +F
Sbjct: 782 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 837
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 72/167 (43%)
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
D +L +G L S + DA +F EM+ +PS T L + + +K
Sbjct: 37 DYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQK 96
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
G L ++ +L+ + L + +M + GY + ++ G C + +
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ +A ++ ++ G+ P+ +VY+ L + L + +L A L +++
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEME 203
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 181/381 (47%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V + S+N+++ F VL M G PD T + ++D + G++ +A
Sbjct: 193 VKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEAR 252
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+L +++ GL + + N+++ C+ + A+++ M + V+ + TYN++ISG+
Sbjct: 253 DLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGF 312
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G++ E R+ +E+ SPD +T++ LI G G ++ ++ + M+ +G P++
Sbjct: 313 CKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNS 372
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN ++ ++ G DE K + M C P++ TY LIS K K+ +A + +E
Sbjct: 373 VTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDE 432
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M +G+ T+ + L LC A + AR+ G + +Y L+ K
Sbjct: 433 MGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEK 492
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L LW EM+E Y +IAGLC +G+ A+ ++E L G P + Y+
Sbjct: 493 ASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNT 552
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ + ++E A+ K+
Sbjct: 553 IIHGYCQEGQVEKAFQFHNKM 573
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 182/414 (43%), Gaps = 36/414 (8%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN I+ L ++ + ++L DM +G+ P+ T +I++ R G + +A ++
Sbjct: 231 DNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVI 290
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKL 280
+ + DA + NV++ C++ + A L M+ K+ +V+TYN +I+G +
Sbjct: 291 ELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEH 350
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G E ++++E+ G P+S+T++ +++ + G++D+ + M+E GC PD Y
Sbjct: 351 GSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTY 410
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYN---------------C-EPNMD----------- 373
N +IS + VG DE + M C E +D
Sbjct: 411 NTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARR 470
Query: 374 --------TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
+Y LI G K K + AL +++EM ++ I+PS T S + LC G +
Sbjct: 471 RGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQ 530
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ + + G Y ++ G+ ++M E + D ++
Sbjct: 531 AIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLC 590
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
GLC G LE A+ + + KG + Y+ + L + A++L +++
Sbjct: 591 GLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEME 644
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 164/339 (48%), Gaps = 4/339 (1%)
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ---RLHVGAASSLFN 257
L I + +++ G+ ++A Q+ R++ G++ + N +L L + + + ++F
Sbjct: 127 LDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFT 186
Query: 258 S-MKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
+K V N ++NI+I G + E RVL ++ G PD++T++ +++GL + G
Sbjct: 187 DFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKG 246
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
R+++A ++ MK KG P+ +N ++ +G E + MS + P+ TY
Sbjct: 247 RLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYN 306
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+ISG K ++A+A+ + EEM + + P T + + +G + ++
Sbjct: 307 VMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGR 366
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G K + Y ++++ GK + +M+ESG D Y +I+ C +G+++ A
Sbjct: 367 GMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEA 426
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+M+E RKG + + + L KL+ A++L
Sbjct: 427 FRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLL 465
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 153/360 (42%), Gaps = 6/360 (1%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDF---GLKFDAESLNVVLW 241
+ + M + G+ P L T + ++++ +R + DF G+K + S N+++
Sbjct: 146 IFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNILIH 205
Query: 242 CLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS 299
C G A + M+ G N+ TYN ++ G K G++ E +L ++ +G
Sbjct: 206 GSCMENRFGEAIRVLGKMRDYGCPPDNI-TYNTILDGLCKKGRLNEARDLLLDMKNKGLF 264
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P+ TF+ L+ G R G + +A V + M + PD YN +IS + G E M+
Sbjct: 265 PNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRL 324
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ M + P++ TY LI+G + + ++ EEM RG+ P++ T ++
Sbjct: 325 REEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVK 384
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
G +K + GC + Y L+ GK L EM G D
Sbjct: 385 KGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVT 444
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ LC +L+ A ++ + R+G+ + Y L K A L+ ++K
Sbjct: 445 LNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMK 504
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/471 (22%), Positives = 200/471 (42%), Gaps = 51/471 (10%)
Query: 107 LQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSY 166
L K++ G D N+ + LD + K +G L+ EA L + +K+ + + ++
Sbjct: 220 LGKMRDYGCPPD---NITYNTILDGLCK---KGRLN-EARDLLLD--MKNKGLFPNRTTF 270
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
N++V R + NV+ M++ V PD T ++++ F + G++ +A+++ +E+
Sbjct: 271 NILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMEN 330
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVE 285
L D + N ++ + L M+G+ + N +TYN+++ + K G++ E
Sbjct: 331 LKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDE 390
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG------------- 332
+++ ++++ G PD +T++ LI + G++D+A + D M KG
Sbjct: 391 VDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLR 450
Query: 333 ---------------CGP-------DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
C D +Y +I Y + ++ + M P
Sbjct: 451 ALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIP 510
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
++ TY +I+GL + K A++ +E+L+ G+VP T + + C G A +
Sbjct: 511 SIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFH 570
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGL 487
K + K + L L G K GML L L++ G D Y +I L
Sbjct: 571 NKMVEKNFKPDVVTCNTL---LCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSL 627
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
C + A ++EE K P Y+ + L + +++ A KI
Sbjct: 628 CKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKI 678
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 176/394 (44%), Gaps = 10/394 (2%)
Query: 115 VIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALG 174
V+ DA W NV ++ +G ++ EAM L +++ ++ DV +YN ++
Sbjct: 298 VVPDA-WTYNV-----MISGFCKQGRIA-EAMRL--REEMENLKLSPDVVTYNTLINGCF 348
Query: 175 RRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
+ ++ +M G+ P+ T ++++ F++ G++ + + + ++E+ G D
Sbjct: 349 EHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIV 408
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEI 293
+ N ++ C+ + A L + M K L + +T N ++ + ++ E +L
Sbjct: 409 TYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSA 468
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
G+ D +++ LI G + + A+ ++D MKEK P YN++I+ +G
Sbjct: 469 RRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKT 528
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
++ + + P+ TY +I G + +V A + +M+++ P T +
Sbjct: 529 NQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTL 588
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
L LC G A+ ++ G + +Y ++ L + G DL EM+E
Sbjct: 589 LCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKL 648
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
D Y ++ GL + G++++A + + KG
Sbjct: 649 GPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKG 682
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 186/395 (47%), Gaps = 1/395 (0%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+V++ +++ ++ D+ S+ +++ R +L M K G P + TL ++
Sbjct: 97 IVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLL 156
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VL 264
+ F + + +A+ ++ ++ FG + N V+ LC+ + A +F M+ K +
Sbjct: 157 NGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIR 216
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+ +TYN +ISG S G+ + R+L+++V P+ + F+ LI+ + G + +A +
Sbjct: 217 ADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNL 276
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
+ M + P+ YN++I+ + G + + M S C P++ TY LI+G K
Sbjct: 277 YKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCK 336
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
S++V D +++F EM +G+V T + + C G + A ++ + G +
Sbjct: 337 SKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVT 396
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y +LL L GK L + ++Q+S D Y +I GLC +L+ A +
Sbjct: 397 YNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 456
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
RKG P + Y + + L A L R++K
Sbjct: 457 RKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 146/300 (48%), Gaps = 1/300 (0%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
+ ++ + D +YN ++ L + +L DM K ++P++ + ++D+F++
Sbjct: 208 YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 267
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTY 270
G + +A + + + + + N ++ C +G A +F+ M K F +V+TY
Sbjct: 268 GNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY 327
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
N +I+G+ K +V + ++ E+ +G D+ T++ LI G +AG+++ A +VF+ M +
Sbjct: 328 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 387
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
G PD YN ++ + G ++ + + + + ++ TY +I GL ++ K+ +
Sbjct: 388 CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 447
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A +F + +G+ P + + LC G A + ++ ++ G S Y LR
Sbjct: 448 AWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 96/189 (50%), Gaps = 1/189 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN ++ + K + + +M +G+ D T + ++ + +AG++ A ++
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
R+ D G+ D + N++L CLC + A + + K ++ +++TYNI+I G +
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
++ E + + + +G PD++ + +I GL R G +A ++ MKE G P Y
Sbjct: 443 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Query: 341 NAVISNYIS 349
+ + ++ +
Sbjct: 503 DETLRDHYT 511
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 99/222 (44%)
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
+ DDA +F M + P + V++ + FD + Y M + ++ ++T
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
LI + +++ AL + +M+ G PS T+ S L C A+ +
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G ++ Y ++ L L++++ M++ G +D Y +I+GL N G+ +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++ + +++ P+ + ++ L + + L A NL++++
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 280
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/236 (18%), Positives = 90/236 (38%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P + F+ ++ + + + D I ++ M+ G D ++ +I + +
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
M P++ T L++G + + +A+ + + M G VP+ + + LC
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
+ A+ ++ K G + Y L+ LS G+ L +M + +
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ +I G L A + +E +R+ P+ Y+ L N L A +F
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 312
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 86/221 (38%), Gaps = 12/221 (5%)
Query: 330 EKGCGPDT------------NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
E+G P+T + Y + N + FD+ + M P++ +TR
Sbjct: 25 ERGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTR 84
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
+++ + K K + ++ +M + GI + T + C A+ + K K+G
Sbjct: 85 VLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLG 144
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
+ S+ LL + + L M G+ + IY VI GLC L NA+
Sbjct: 145 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 204
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
V +KG + Y+ L + L S + A L R +
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM 245
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 188/402 (46%), Gaps = 5/402 (1%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
V+ + GNL +A L K A D+ +YN ++ A R C M
Sbjct: 138 VISGLCKSGNLE-KARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMK 196
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
G+NPD+ T +I++ + G V +A+++L ++ G D + N ++ LC V
Sbjct: 197 AAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVV 256
Query: 251 AASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A+ + +M +++T+N ++ G+ K G + VL+E+ E PD +T++ L+
Sbjct: 257 EAAEILKTMSCSP--DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVN 314
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
GL R G++ A + + + +G PD AY +++ G+ +E K K MS C
Sbjct: 315 GLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRT 374
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
+ Y+ L+SG ++ V A E+ EM+ +VP T L L G A+ +
Sbjct: 375 GVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLI 434
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG-YPSDGEIYEYVIAGLCN 489
G + Y L+ L + DL EM G +P+D + V+ GLC
Sbjct: 435 SDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGS-VVFGLCR 493
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
+G++++A ++ E RK P+ +VY+ L + L S++++ A
Sbjct: 494 VGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDA 535
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 186/395 (47%), Gaps = 6/395 (1%)
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
+ FF+WA + DV SYN ++ L + V D+ G +P+L T I++
Sbjct: 11 IQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIR 70
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLF 265
+AGQ +A++ L L++F + D NV++ L + + A LF +M+ +V
Sbjct: 71 GNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKP 130
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEG--FSPDSLTFSFLIEGLGRAGRIDDAIE 323
++TYN VISG K G + + +L+E++ +G +PD +T++ LI RA RI +A
Sbjct: 131 EIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACA 190
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+ MK G PD N ++S GD +E ++ GM P++ TY +I L
Sbjct: 191 FREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALC 250
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
+ KV +A E+ + M P T + L+ C G A+ + ++ + +
Sbjct: 251 VAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVI 307
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
Y +L+ L G+ + L E+ GY D Y ++ GLC G++E A +++E
Sbjct: 308 TYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEM 367
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+G ++YS L + + + A + ++
Sbjct: 368 SVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEM 402
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 187/403 (46%), Gaps = 8/403 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG--VNPDLETL 201
+A+ LF N ++ V ++ +YN ++ L + + +L +M ++G PD+ T
Sbjct: 115 QAVKLFEN--MESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTY 172
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK- 260
+ ++++F RA ++ +A +++ G+ D + N+++ +C+ V A + + MK
Sbjct: 173 NTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKL 232
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
+ +V+TYN +I G+VVE +LK + SPD +TF+ L++G +AG +
Sbjct: 233 AGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPR 289
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A+EV + M + PD Y +++ VG + + P++ YT L+
Sbjct: 290 ALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVD 349
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
GL KS ++ +A ++ +EM RG +S + C G H A + + +
Sbjct: 350 GLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVP 409
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
L Y ++L L G + L ++ GY D Y +I GLC ++ A +
Sbjct: 410 PLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLA 469
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
+E +G P+ + + L +++ A++L ++ R
Sbjct: 470 DEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRH 512
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 161/373 (43%), Gaps = 13/373 (3%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L +K G + D + ++ +L V GKVV + +K + + D+ +
Sbjct: 226 ILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEI------------LKTMSCSPDLVT 273
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
+N ++ + VL +M +E + PD+ T +I+++ R GQV A +L +
Sbjct: 274 FNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIV 333
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
G D + ++ LC+ + A L M + V+ Y+ ++SG+ + G V
Sbjct: 334 RQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVH 393
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ +L E+V+ P T++ ++ GL + G I A+ + + +G PD YN +I
Sbjct: 394 KAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLI 453
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
E M+S C PN T ++ GL + +V DA + EM +
Sbjct: 454 DGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHA 513
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P+ TS ++ LC A M+ R G L AY+ L+ +S G+ + +
Sbjct: 514 PNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAM 573
Query: 465 WHEMQESGYPSDG 477
+ EM G+ DG
Sbjct: 574 YDEMVARGFLPDG 586
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 117/255 (45%), Gaps = 1/255 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y +V L + + ++ +M+ G + S ++ + RAG V+KA ++L
Sbjct: 340 DVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREIL 399
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ + + N+VL L + + A SL + + + + +V+TYN +I G K
Sbjct: 400 AEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKA 459
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+V E + E+ + G P+ +T ++ GL R GR+DDA + M K P+ Y
Sbjct: 460 NRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVY 519
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++I D+ M + Y +LI + +VA+A+ +++EM+
Sbjct: 520 TSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVA 579
Query: 401 RGIVPSTGTITSFLE 415
RG +P T + E
Sbjct: 580 RGFLPDGSTSKTLEE 594
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 170/345 (49%), Gaps = 1/345 (0%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P+ VM+ + G K + +L +E K D + ++V+ LC+ +++ AA +L
Sbjct: 166 PNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINL 225
Query: 256 FNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
N MK K + N+ TYN +I G KLGQ +++ +L E+V +P+ TFS LI+GL +
Sbjct: 226 LNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCK 285
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G+++DA EV M EKG PD Y+A++ Y G D + + + +PN+ +
Sbjct: 286 EGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFS 345
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y+ LI+G K + +A A+++F E+ +G+ P T T ++ L L G A ++ +
Sbjct: 346 YSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEML 405
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
+VG + + LL +G + L+ +++ + ++ Y VI GLC ++
Sbjct: 406 RVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVR 465
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
A + E+ G P Y+ + + + RK++
Sbjct: 466 EAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKME 510
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 164/325 (50%), Gaps = 1/325 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K N+ ++ +YN ++ L + ++ + +LS+M +NP++ T SI++D + G+
Sbjct: 229 MKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGK 288
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
V A +++ + + G++ D + + ++ C R V A +FN ++ K + N+ +Y+I
Sbjct: 289 VEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSI 348
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I+G+ K + + ++ EI +G PD++T+S ++ GL GRI DA ++FD M G
Sbjct: 349 LINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVG 408
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD ++ ++ Y G +E M + + + N+ YT +I+GL K+ +V +A
Sbjct: 409 PTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAH 468
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+FE++ G++P T + C G + +K GC + Y ++++
Sbjct: 469 AIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGF 528
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDG 477
K ++ EM G+ D
Sbjct: 529 FRSNKISEIVSFMKEMAGRGFSFDA 553
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 184/403 (45%), Gaps = 4/403 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF P V ++ + K + K + + ++ +M G+ L+I
Sbjct: 45 DAVSLFHRMVRMKP--LPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
V +S+ ++ A +L G+ F+ + N +L L V A LF + +
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162
Query: 264 LF--NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
+ N + Y V++G SK G + +L+ + PD T+S +I+ L + +D A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
I + + MK+K P+ YN++I +G +++ M + N PN+ T++ LI G
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L K KV DA EV M+++G+ P T ++ ++ C G A ++ R G K +
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPN 342
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ +Y +L+ + L+ E+ + G D Y ++ GL +G++ +A + +
Sbjct: 343 IFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFD 402
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
E LR G P ++S L +E A LF K++ R++
Sbjct: 403 EMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNRED 445
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 115/270 (42%), Gaps = 36/270 (13%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D+ +Y+ I+ R D V + + +G+ P++ + SI+++ + + + KA+
Sbjct: 304 VEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAM 363
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------------------- 259
Q+ G + GLK D + + +L L + +G A +F+ M
Sbjct: 364 QLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGY 423
Query: 260 -------KGKVLF----------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
+ +LF N+ Y +VI+G K +V E + +++ + G PD
Sbjct: 424 FKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDV 483
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
T++ +I G R G D+ + M++ GC + YN ++ + E + + K
Sbjct: 484 RTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKE 543
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
M+ + T LI+ L ++ + D +
Sbjct: 544 MAGRGFSFDATTTGVLINVLKENPSIVDMI 573
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 170/349 (48%), Gaps = 1/349 (0%)
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
+PD+ + + ++ F +A Q+ A Q+ R+ G D + N+++ LC R + A
Sbjct: 128 DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFE 187
Query: 255 LFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
+ + + K +V+TY I+I G++ E + E+V+ G PD T++ +I G+
Sbjct: 188 VMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGIC 247
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+ G D A++ + +GC PD +YN ++ ++++ +++ + K M CEPN+
Sbjct: 248 KEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVV 307
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
T++ LIS + +V +A+ V E M ++G+ P + + + C G A+ +K
Sbjct: 308 THSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKM 367
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
GC + Y +L L FG + LD++ ++ E G P Y + + L + G
Sbjct: 368 VSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNK 427
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
A+ ++ E +RKG P + Y+ L + L ++ A L ++ R
Sbjct: 428 IKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATR 476
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 174/357 (48%), Gaps = 1/357 (0%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
+ DV +YN+++ +L R + V+ ++ K+G P + T +I++++ I G++ +A++
Sbjct: 163 SPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALE 222
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
+ L GL+ D + N ++ +C+ A + + +V++YNI++ +
Sbjct: 223 LFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFL 282
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
+ + ER++K++V G P+ +T S LI R GR+ +A+ V + MKEKG PD+
Sbjct: 283 NKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSY 342
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
+Y+ +IS + G D ++Y + M S C P++ Y +++ L K AL+VFE++
Sbjct: 343 SYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKL 402
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+ G P+ + L S G A+ M + + G Y L+ L G
Sbjct: 403 DEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLV 462
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
+ L +M+ + + + V+ G+C ++ + ++ + KG P+ Y
Sbjct: 463 DEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSY 519
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 132/277 (47%), Gaps = 1/277 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV SYN+++++ + ++ ++ DM G P++ T SI++ SF R G+V +A+ +L
Sbjct: 270 DVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVL 329
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+++ GL D+ S + ++ C+ + A M L +++ YN +++ K
Sbjct: 330 EVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKF 389
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G V +++ G P ++ + L G A+E+ M KG PD Y
Sbjct: 390 GCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITY 449
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N++IS G DE + M + +P + ++ ++ G+ K+ +V + +E+ M++
Sbjct: 450 NSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVE 509
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
+G +P+ + +E + G AM + ++G
Sbjct: 510 KGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLG 546
>gi|357156708|ref|XP_003577549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Brachypodium distachyon]
Length = 522
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 179/390 (45%), Gaps = 14/390 (3%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+ +Y+ +V ALGR FD ++ + A +G T +++ ++ AG +A++
Sbjct: 113 NADAYDAVVDALGRAHQFDAAWRLVVEAAADGAATS-RTFAVLARRYVAAGMTRQAVRAF 171
Query: 222 GRLEDF-GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKL 280
+E F G + DA +L LC+ + A+ +FN K K N Y I+I GW K+
Sbjct: 172 DDMEAFVGREPDAGEFTTLLDTLCKYKYPKVATEVFNKRKYKYEPNEKMYTILIYGWCKV 231
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG------RIDDAI----EVFDTMKE 330
+ ++ LK+++ G P+ +T++ L+ G+ R R D + ++ M++
Sbjct: 232 NRNDMSQKFLKDMIDHGIEPNVVTYNILLNGVCRHASLHPDNRFDRTVRAAEDLLKEMRD 291
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
+G PD +Y+ V+ Y + C+ ++ M P + TYT +I L ++ D
Sbjct: 292 RGIEPDVTSYSIVLHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLED 351
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS--LTAYKLL 448
A + EM G+ PS T F + A+ +YKK + + + +Y +L
Sbjct: 352 AERLLHEMASEGVCPSPATYNCFFKEYRGRKDVIGALELYKKMKAPASPTAPDIHSYHIL 411
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L + G + +LW++M ES D + Y +I G C + A E + KGF
Sbjct: 412 LGMFVKLNQHGTVTELWNDMCESTVGPDLDSYTLLIHGFCENEKWREACQFFMEMIEKGF 471
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P ++ + L L+ ++ L + L +++
Sbjct: 472 LPQKITFEILYRGLIQADMLRTWRRLKKRV 501
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 122/292 (41%), Gaps = 27/292 (9%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N Y+ V+ + Q R++ E A+G + S TF+ L AG A+ F
Sbjct: 113 NADAYDAVVDALGRAHQFDAAWRLVVEAAADG-AATSRTFAVLARRYVAAGMTRQAVRAF 171
Query: 326 DTMKE-KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS-------YNCEPNMDTYTR 377
D M+ G PD + ++ C Y +++ Y EPN YT
Sbjct: 172 DDMEAFVGREPDAGEFTTLLDTL--------CKYKYPKVATEVFNKRKYKYEPNEKMYTI 223
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH----------AAM 427
LI G K + + + ++M+D GI P+ T L +C + H AA
Sbjct: 224 LIYGWCKVNRNDMSQKFLKDMIDHGIEPNVVTYNILLNGVCRHASLHPDNRFDRTVRAAE 283
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+ K+ R G + +T+Y ++L S K + L ++ M++ G Y VI L
Sbjct: 284 DLLKEMRDRGIEPDVTSYSIVLHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCL 343
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ G+LE+A ++ E +G CPS Y+ + + A L++K+K
Sbjct: 344 ASCGRLEDAERLLHEMASEGVCPSPATYNCFFKEYRGRKDVIGALELYKKMK 395
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 208/436 (47%), Gaps = 9/436 (2%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
V L ++ G + +A+ S + V K + + S EA+ + A + + DV
Sbjct: 213 VLLHRMSDLGCVPNAI-------SYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVV 265
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S+N ++ ++ CN++++M ++GV PD+ T + ++D+ +A + KA +L ++
Sbjct: 266 SFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQM 325
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
D G++ D + ++ H ++ +F M K L ++T+N +S K G+
Sbjct: 326 VDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRS 385
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ E + + + +G PD +++S L+ G GR D +F +M +KG + + +N +
Sbjct: 386 KDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNIL 445
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS + G DE M + M P++ TY+ LIS + ++ADA+E F +M+ G+
Sbjct: 446 ISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGL 505
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC-KLSLTAYKLLLRRLSGFGKCGMLL 462
P+T S + C +G A + + G + ++ + ++ L G+
Sbjct: 506 EPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAH 565
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
D+++ + G + +I G C +G++E A V++ + G P + Y+ L +
Sbjct: 566 DVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGY 625
Query: 523 LASNKLESAYNLFRKI 538
S K++ LFR++
Sbjct: 626 CKSGKIDDGLILFREM 641
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 179/380 (47%), Gaps = 2/380 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ SY++++ F M N+ MA +G+ + +I++ + + G + +A+ +
Sbjct: 403 DLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVF 462
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
++ G++ D + + ++ C+ + A F+ M L N + Y+ +I G+
Sbjct: 463 TEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMH 522
Query: 281 GQVVEMERVLKEIVAEGFS-PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G +V+ + ++ E++++G P+ + FS +I L GR+ DA +VF+ + G P
Sbjct: 523 GDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVT 582
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
+N++I Y VG ++ M S EP++ TY L+SG KS K+ D L +F EML
Sbjct: 583 FNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREML 642
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
+ + P+T T + L+ L G AA M+ + G + + YK+LL+ L
Sbjct: 643 HKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTD 702
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ L+H++ D I VI L + + E A + G P+ Y +
Sbjct: 703 EAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMI 762
Query: 520 NKLLASNKLESAYNLFRKIK 539
+ LL +E A +F ++
Sbjct: 763 HNLLKEGSVEEADTMFSSME 782
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 192/443 (43%), Gaps = 53/443 (11%)
Query: 142 SGEAMVL-FFNWAIKH---PNVAK-DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNP 196
+G A+VL FN + P VA V +Y +++ R + D + + + G
Sbjct: 130 NGPALVLALFNRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAG--- 186
Query: 197 DLETLSIVMDSFIR----AGQVYKAIQ-MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
L T +I ++F++ A + +A+ +L R+ D G +A S N V+ LC
Sbjct: 187 -LRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQE 245
Query: 252 ASSLFNSMK---GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
A + M G+ +V+++N VI G+ K G+V + ++ E+V +G PD +T++ +
Sbjct: 246 ALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSI 305
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
++ L +A +D A V M +KG PD Y A+I Y G + E K ++ M+S
Sbjct: 306 VDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGL 365
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFE-------------------------------- 396
P + T+ +S L K + DA E+F+
Sbjct: 366 IPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNN 425
Query: 397 ---EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
M D+GIV + + G AM+++ + + G + + Y L+
Sbjct: 426 LFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFC 485
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSR 512
G+ ++ + +M G + +Y +I G C G L A ++ E + KG P+
Sbjct: 486 RMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNI 545
Query: 513 LVYSKLSNKLLASNKLESAYNLF 535
+ +S + + L ++ A+++F
Sbjct: 546 VFFSSIIHSLCNEGRVMDAHDVF 568
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 150/345 (43%), Gaps = 4/345 (1%)
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG-AASSLF 256
+ T I+MD RA + RL GL+ N L CLC A L
Sbjct: 156 VHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLL 215
Query: 257 NSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG--FSPDSLTFSFLIEGLG 313
+ M + N ++YN VI + E +++ + EG SPD ++F+ +I G
Sbjct: 216 HRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFF 275
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+ G + A + + M +KG PD YN+++ D+ + M EP+
Sbjct: 276 KQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGL 335
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
TYT +I G S ++ ++F +M +G++P T SF+ LC +G A +++
Sbjct: 336 TYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYM 395
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
G L +Y +LL + G+ + +L+H M + G ++ + +I+ G +
Sbjct: 396 TTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMM 455
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ A+LV E +G P + YS L + +L A F ++
Sbjct: 456 DEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQM 500
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 114/266 (42%), Gaps = 1/266 (0%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
G P + T + ++D + G++ KA +L + G++ D + N ++ C+ +
Sbjct: 575 GDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDG 634
Query: 253 SSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
LF M KV +TY+IV+ G G+ +++ E++ G + D T+ L++G
Sbjct: 635 LILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKG 694
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
L R D+AI +F + C D N VI+ V +E + +S+ PN
Sbjct: 695 LCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPN 754
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+ TY +I LLK V +A +F M G PS+ + + L G A
Sbjct: 755 VSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMS 814
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGK 457
K L + LL+ S GK
Sbjct: 815 KVDGTIISLEASTTSLLMSLFSSKGK 840
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 148/346 (42%), Gaps = 39/346 (11%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EAM++F ++ V DV +Y+ ++ A R S M G+ P+
Sbjct: 457 EAMLVF--TEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHS 514
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGL-KFDAESLNVVLWCLCQR-------------LHV 249
++ F G + KA +++ + G+ + + + ++ LC +H+
Sbjct: 515 LIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHI 574
Query: 250 GAASSL--FNSM-KGKVLF--------------------NVMTYNIVISGWSKLGQVVEM 286
G ++ FNS+ G L +V+TYN ++SG+ K G++ +
Sbjct: 575 GDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDG 634
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
+ +E++ + P ++T+S +++GL AGR A ++F M + G D + Y ++
Sbjct: 635 LILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKG 694
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
DE + + + + +C+ ++ +I+ L K R+ +A ++F + G+VP+
Sbjct: 695 LCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPN 754
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
T + L G A M+ K GC S ++R L
Sbjct: 755 VSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRML 800
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 1/196 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV +YN +V + D + +M + V P T SIV+D AG+ A
Sbjct: 611 IEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAK 670
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGW 277
+M + D G D ++ ++L LC+ A +LF+ + F++ N VI+
Sbjct: 671 KMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINAL 730
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K+ + E + I G P+ T+ +I L + G +++A +F +M++ GC P +
Sbjct: 731 YKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSS 790
Query: 338 NAYNAVISNYISVGDF 353
N +I + GD
Sbjct: 791 RLLNDIIRMLLQKGDI 806
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 168/376 (44%), Gaps = 34/376 (9%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +V SYN ++ R+ D +V SDM + P++ T SI++D + G KA+
Sbjct: 460 MVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKAL 519
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
+ FD Q L + A + F T+N +I+G
Sbjct: 520 DL----------FD------------QMLSLNIAPTDF------------TFNTIINGLC 545
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K+GQ+ E LK + EGF P +T++ +++G + G ID A+ V+ M E G P+
Sbjct: 546 KVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVV 605
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
Y ++I+ + D +K M E ++ Y+ LI G K R + A ++F E+
Sbjct: 606 TYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFEL 665
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
L+ G+ P+ S + AA++ YKK L Y L+ L G+
Sbjct: 666 LEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRL 725
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
DL+ EM G D + ++ GLCN GQLENA ++EE RK PS L+Y+ L
Sbjct: 726 VFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTL 785
Query: 519 SNKLLASNKLESAYNL 534
L+ A+ L
Sbjct: 786 IAGYFREGNLKEAFTL 801
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 211/456 (46%), Gaps = 16/456 (3%)
Query: 99 EERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWA-IKHP 157
E + RGV L +I+ N +L L+++ ++ RG + EA A +
Sbjct: 245 ETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQG 304
Query: 158 NVAKDV----------KSYNVIV-----KALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
N+ + + K N++V K + D N+ + + ++G+ P+ T S
Sbjct: 305 NMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYS 364
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK 262
++++ +G + KA ++ +++ G+ ++N +L + AS LF+
Sbjct: 365 VLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDC 424
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ N+ TYNI++S K G++ E +L +V +G P+ ++++ +I G R G +D A
Sbjct: 425 GVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMAS 484
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
VF M + P+ Y+ +I GD ++ + + M S N P T+ +I+GL
Sbjct: 485 SVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGL 544
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K ++++A + + L+ G +PS T S ++ G +A+ +Y++ + G ++
Sbjct: 545 CKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNV 604
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L+ + + L EM+E G D Y +I G C +E+A + E
Sbjct: 605 VTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFE 664
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
L G P+R+VY+ + + N +E+A ++K+
Sbjct: 665 LLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKM 700
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 184/413 (44%), Gaps = 39/413 (9%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V N+++ AL RR + ++ + M G+ D T+ +++ + ++ G+V +A +
Sbjct: 185 VPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFR 244
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV-LFNVMTYNIVISGWSKLG 281
++ G+K DA + ++++ +C++ + L MK + + + T+ VI G
Sbjct: 245 ETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQG 304
Query: 282 QVVEMERVLKE-----------------------------------IVAEGFSPDSLTFS 306
+VE R+ +E I +G P+ +T+S
Sbjct: 305 NMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYS 364
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
LIEG +G I+ A E++ MK G P N+++ Y+ ++E K + +
Sbjct: 365 VLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFD--EAV 422
Query: 367 NCE-PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
+C N+ TY ++S L K K+ +A + + M+++G+VP+ + + C G
Sbjct: 423 DCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDM 482
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A ++ K ++ Y +L+ G LDL+ +M + +I
Sbjct: 483 ASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIIN 542
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GLC +GQ+ A ++ L +GF PS + Y+ + + + ++SA ++R++
Sbjct: 543 GLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREM 595
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 36/259 (13%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN IV + D V +M + GV+P++ T + +++ F ++ ++ A++ +
Sbjct: 571 TYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEM 630
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------KGKVLFNVM---------- 268
+ GL+ D + + ++ C+R + +A LF + ++++N M
Sbjct: 631 REKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNM 690
Query: 269 --------------------TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
TY +I G K G++V + E++++G PD +TF L
Sbjct: 691 EAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVL 750
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
+ GL G++++A ++ + M K P YN +I+ Y G+ E + M
Sbjct: 751 VNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGL 810
Query: 369 EPNMDTYTRLISGLLKSRK 387
P+ TY LI+G K +
Sbjct: 811 VPDDVTYDILINGKFKGDR 829
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 123/310 (39%), Gaps = 36/310 (11%)
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTY-NIVISGWSKLGQVVE 285
F + D N +L + + A FN+M + + + Y NI+++ + + E
Sbjct: 144 FDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGE 203
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+ + ++V G D T ++ + GR+++A E F KE+G D AY+ +I
Sbjct: 204 LRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQ 263
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
C K PN + LE+ EEM +RG VP
Sbjct: 264 AV--------CKK-----------PNSNL----------------GLELLEEMKERGWVP 288
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
S T TS + + G A+ + ++ G ++L L++ G L+L+
Sbjct: 289 SEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLF 348
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
+++ E G + Y +I G CN G +E A + + G PS + L L +
Sbjct: 349 NKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKA 408
Query: 526 NKLESAYNLF 535
E A LF
Sbjct: 409 PLWEEASKLF 418
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 123/297 (41%), Gaps = 6/297 (2%)
Query: 244 CQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
C LH+ S + K+L N +SG S VV ++ ++ F D
Sbjct: 98 CVLLHILMRSPETHGHARKLL------NRYVSGDSDPSPVVFVDHLINCAKRFDFELDHR 151
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
F++L+ RA RI++AI+ F+ M + P N +++ + E Y M
Sbjct: 152 VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKM 211
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ T ++ LK +V +A E F E +RG+ G + ++ +C
Sbjct: 212 VLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNS 271
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
+ + + ++ ++ G S + ++ G L L EM G P + + +
Sbjct: 272 NLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSL 331
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+ G C G L++A+ + + G P+++ YS L S +E A L+ ++K+
Sbjct: 332 MKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKL 388
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 177/378 (46%), Gaps = 1/378 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ ++ ++ LG+ F + DM G PD T + +++ + G+ A +
Sbjct: 45 IVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFK 104
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
++E+ G + + + + ++ LC+ V A +F+ MK K + + TY +I G
Sbjct: 105 KMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFS 164
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ E +L E+ + P+ +TF+ L++ + G++ A V TM E G PD YN
Sbjct: 165 RWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYN 224
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+++ Y + E K + M + C+P++ +Y+ LI+G K++++ +A ++F EM+ +
Sbjct: 225 SLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQ 284
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G P+ + + + LC G A ++K G +L Y +LL G G
Sbjct: 285 GSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKA 344
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+ MQ + + +Y ++ +C G L++A + E G P+ +Y+ + N
Sbjct: 345 FRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIING 404
Query: 522 LLASNKLESAYNLFRKIK 539
L L+ A FR ++
Sbjct: 405 LCKEGLLDEALEAFRNME 422
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 161/348 (46%), Gaps = 1/348 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V +Y+ ++ +L + + + ++ S M + ++P + T + ++ + +A +L
Sbjct: 114 NVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALL 173
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ + + + NV++ C+ V AA + +M + V +V+TYN ++ G+S
Sbjct: 174 NEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMW 233
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+VVE ++ ++ +G PD ++S LI G +A RID+A ++F+ M +G P+ +Y
Sbjct: 234 TEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSY 293
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I +G E +K M + PN+ TY L+ G K + A +F M
Sbjct: 294 NTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQS 353
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+ P+ + +C G A ++ + +G + ++ Y ++ L G
Sbjct: 354 TYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDE 413
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L+ + M++ G P D Y +I G AV ++ E +GF
Sbjct: 414 ALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGF 461
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 129/273 (47%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N T NI+I+ + +L +V VL + + G P +TF+ LI GLG+ G+ A+E+F
Sbjct: 9 NTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELF 68
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M +GC PD Y +I+ +G+ +K M C+ N+ TY+ LI L K
Sbjct: 69 DDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKY 128
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
R+V +AL++F M + I P+ T TS ++ LC++ A + + + ++ +
Sbjct: 129 RRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTF 188
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+L+ GK + M E G D Y ++ G ++ A + + +
Sbjct: 189 NVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMIT 248
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
KG P YS L N + +++ A LF ++
Sbjct: 249 KGCKPDVFSYSILINGYCKAKRIDEAKQLFNEM 281
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 148/317 (46%), Gaps = 3/317 (0%)
Query: 224 LEDFGLKFDAESLNVVLWCLCQ--RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLG 281
+E GL + +LN+++ C CQ R+ +G S L +K + ++T+ +I+G K+G
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGF-SVLAKGIKLGLQPTIVTFTTLINGLGKVG 59
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ + + ++VA G PD T++ +I GL + G A +F M+E GC + Y+
Sbjct: 60 KFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYS 119
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I + +E + + M + + P + TYT LI GL + +A + EM
Sbjct: 120 TLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSL 179
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
I+P+ T ++ C G AA + K ++G + + Y L+ S + +
Sbjct: 180 NIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEA 239
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+ M G D Y +I G C +++ A + E + +G P+ + Y+ L +
Sbjct: 240 RKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHG 299
Query: 522 LLASNKLESAYNLFRKI 538
L +L A +LF+ +
Sbjct: 300 LCQLGRLREAQDLFKNM 316
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 126/259 (48%), Gaps = 15/259 (5%)
Query: 159 VAKDVKSYNVIV-------KALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
V DV +YN ++ + + RK FD M +G PD+ + SI+++ + +A
Sbjct: 216 VEPDVVTYNSLMYGYSMWTEVVEARKLFDVM-------ITKGCKPDVFSYSILINGYCKA 268
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV-LFNVMTY 270
++ +A Q+ + G + S N ++ LCQ + A LF +M L N+ TY
Sbjct: 269 KRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTY 328
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
I++ G+ K G + + R+ + + + P+ + ++ L+ + ++G + DA E+F +
Sbjct: 329 AILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFV 388
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
G P+ Y +I+ G DE ++ ++ M C P+ +Y +I G L+ + +
Sbjct: 389 IGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESR 448
Query: 391 ALEVFEEMLDRGIVPSTGT 409
A+ + EM DRG + GT
Sbjct: 449 AVHLIGEMRDRGFITDAGT 467
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 60/138 (43%)
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G+ P+T T+ + C + K K+G + ++ + L+ L GK
Sbjct: 5 GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
++L+ +M G D Y +I GLC IG+ A + ++ G + + YS L +
Sbjct: 65 VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124
Query: 522 LLASNKLESAYNLFRKIK 539
L ++ A ++F +K
Sbjct: 125 LCKYRRVNEALDIFSYMK 142
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 174/365 (47%), Gaps = 7/365 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAK-EGVNPDLETLSIVMDSFIRAGQVYKA 217
VA + ++YNV+V L + + VL +M + V PDL T S V++ F + G++ +A
Sbjct: 5 VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64
Query: 218 IQMLGRL-EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVIS 275
++L + G+ D + V+ LC+ + A + MK K V + T++ +I+
Sbjct: 65 CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG- 334
GW +V E ++ KEI+ D+++ S LI GL R RI +A E+F M+ + G
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGA 184
Query: 335 --PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD Y A+I + G+ ++ MK M C PN+ TY+ L+ GL K+ + AL
Sbjct: 185 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 244
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
++F M +G VP+ T T+ + LC+ AA ++ + C +Y LL
Sbjct: 245 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGY 304
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE-SLRKGFCPS 511
G+ L+ EM D Y ++ G CN +LE A ++E G P
Sbjct: 305 CRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 364
Query: 512 RLVYS 516
+ YS
Sbjct: 365 VVTYS 369
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 130/531 (24%), Positives = 222/531 (41%), Gaps = 90/531 (16%)
Query: 94 EFLLPEERLRGVFLQKL-------KGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEA- 145
EF+ P ER V + L K V+++ +V L V+N GE
Sbjct: 3 EFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMD 62
Query: 146 -MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIV 204
+ +A DV +Y +V L R D C ++ +M +GV PD T S +
Sbjct: 63 RACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSAL 122
Query: 205 MDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK---- 260
+ + A +V +A+++ + + DA S + ++ LC+ +G A LF M+
Sbjct: 123 ITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRED 182
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
G +V+TY +I G+ K G + + ++L + P+ +T+S L+ GL +AG +D
Sbjct: 183 GAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQ 242
Query: 321 AIEVFDTMKEKGCGP-----------------------------------DTNAYNAVIS 345
A+++F M KGC P DT +YNA++
Sbjct: 243 ALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLD 302
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG------------LLKSRKVA---- 389
Y +G +E + +K M++ +C P+ TYT L+ G LL++ K A
Sbjct: 303 GYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGID 362
Query: 390 --------------------DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
+A E +EM+ R + P+ T +S ++ LC G + AM +
Sbjct: 363 PDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEV 422
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM-QESGYPSDGEIYEYVIAGLC 488
K K + Y +++ L G + L L EM + PS G + VI LC
Sbjct: 423 LKNVDKP----DVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVG-TFNSVIGALC 477
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+G ++ A ++ G P + Y+ L + ++E AY LF ++
Sbjct: 478 RLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMR 528
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 164/348 (47%), Gaps = 41/348 (11%)
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMK-GK-VLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
+ NVV+ LC+ A + M+ GK V +++TY+ VI+G+ K G++ +L+E
Sbjct: 11 TYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILRE 70
Query: 293 IVA-EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
+V +G +PD +T++ +++GL R G++D A E+ MK KG PD ++A+I+ + +
Sbjct: 71 MVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNAR 130
Query: 352 DFDECMKYYKGMSSYNC--------------------------------------EPNMD 373
DE +K YK + + +C +P++
Sbjct: 131 KVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVV 190
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
TYT LI G KS + A+++ M R VP+ T +S L LC G A+ ++++
Sbjct: 191 TYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRM 250
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
GC ++ Y L+ L K L EM + P+D Y ++ G C +G++
Sbjct: 251 TSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRI 310
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
E A + +E K P R+ Y+ L +++LE A L +K A
Sbjct: 311 EEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTA 358
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 190/438 (43%), Gaps = 43/438 (9%)
Query: 143 GEAMVLFFNWAIKHPNVAK-DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
GEA LF ++ K DV +Y ++ + + +L M P++ T
Sbjct: 168 GEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTY 227
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
S ++ +AG + +A+ + R+ G + + ++ LC V AA L + M
Sbjct: 228 SSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTA 287
Query: 262 KVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
+ ++YN ++ G+ +LG++ E +++ KE+ A+ PD +T++ L+ G A R+++
Sbjct: 288 TCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEE 347
Query: 321 AIEVFDTMKEK-GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
A + + MK G PD Y+ V++ Y F E ++ + M + N PN TY+ LI
Sbjct: 348 ARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLI 407
Query: 380 SGLLKSRKVADALEVF-------------------------------EEMLDRGIVPSTG 408
GL K+ +V A+EV EEM+++ + PS G
Sbjct: 408 DGLCKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVG 467
Query: 409 TITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM 468
T S + LC G A + G + + Y LL S G+ + +L+ M
Sbjct: 468 TFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVM 527
Query: 469 QESGYPSDG-------EIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRLVYSKLSN 520
+ S + + +I GLC +++ A+ V+EE LR C P+ + +
Sbjct: 528 RRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEE-LRSRECEPAEEDCLAIVD 586
Query: 521 KLLASNKLESAYNLFRKI 538
LL + + E A L I
Sbjct: 587 GLLRAGRTEEAGKLINSI 604
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 176/367 (47%), Gaps = 8/367 (2%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY- 215
P DV++Y ++ AL R ++ + +++ ++GV P L T ++V+D + R G+ +
Sbjct: 167 PGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWP 226
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN-VMTYNIVI 274
+ + +L + G++ D + + V+ C+ V A + F +K + V+TYN ++
Sbjct: 227 RIVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALL 286
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+ K G E RVLKE+ +G PD++T++ L RAG ++A + DTM KG
Sbjct: 287 QVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLL 346
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ YN V++ Y ++G DE + + M C PN++TY ++ L K + LE+
Sbjct: 347 PNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEM 406
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
EM G P+ T + L G + + + G +LS Y L ++
Sbjct: 407 LGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTL---IAA 463
Query: 455 FGKCGM---LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
+G+CG +++EM +G+ Y ++ L G A ++ + KGF P+
Sbjct: 464 YGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPN 523
Query: 512 RLVYSKL 518
YS L
Sbjct: 524 DQSYSLL 530
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 178/409 (43%), Gaps = 57/409 (13%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMA-KEGVNPDLETLSIVMDSFIRAGQVYKAI 218
A D + ++V+ALGR D +C +L +M G D+ + V+ + RAG+ +A+
Sbjct: 134 AADASALEMVVRALGREGQHDAVCALLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERAV 193
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
++ L G V ++TYN+V+ +
Sbjct: 194 ELFAELRRQG----------------------------------VAPTLVTYNVVLDVYG 219
Query: 279 KLGQV-VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
++G+ + +L E+ A G PD T S +I R G +D+A+ F+ +K +G P
Sbjct: 220 RMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCV 279
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YNA++ + G++ E ++ K M C+P+ TY L ++ +A + +
Sbjct: 280 VTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDT 339
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M +G++P+ T + + + G A+ ++ + +K GC ++ Y +L L +
Sbjct: 340 MTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSR 399
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK----------- 506
++L++ EM SG + + ++A +C +E+ V + E ++
Sbjct: 400 FTVMLEMLGEMSRSGCTPNRVTWNTMLA-VCGKRGMEDYVTRVLEGMKSCGVELSRDTYN 458
Query: 507 ------GFCPSRLVYSKLSNKLLASN--KLESAYNLFRKIKIARQNDYA 547
G C SR K+ N++ ++ + YN + ++RQ D++
Sbjct: 459 TLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNV-LSRQGDWS 506
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ A GR + ++M G P L T + +++ R G A ++ ++
Sbjct: 456 TYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKM 515
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN--VMTYNIVISGWSKLGQ 282
G K + +S +++L C + ++ ++ + G +F V+ +VI+ + K +
Sbjct: 516 RTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANF-KCRR 574
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ +E+ +E+ A G++PD + F+ ++ + G E+FD++K+ G PD YN+
Sbjct: 575 LGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNS 634
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
++ Y + E K + S +P++ +Y +I+G K + +A + EM+ G
Sbjct: 635 LMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADG 694
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+ P T + + +A++ M+ +AR+V
Sbjct: 695 MAPCVVTYHTLVG-------GYASLEMFSEAREV 721
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 180 DFMCNVLSDMAK-------EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
+F C L + K G NPDL + ++ + + G K ++ ++ GL D
Sbjct: 569 NFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPD 628
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLK 291
+ N ++ + A + N +K +V +V++YN VI+G+ K G + E +R+L
Sbjct: 629 LITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILS 688
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
E++A+G +P +T+ L+ G +A EV + M + P Y V+ +Y
Sbjct: 689 EMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTYRRVVDSYCKAK 748
Query: 352 DFDECMKYYKGMSSYNCEPNMD 373
F+E + +S +PN D
Sbjct: 749 RFEEARSFLSEVS--ETDPNFD 768
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 118/275 (42%), Gaps = 36/275 (13%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG------- 212
A + +YN ++ L R+ + +++S M +G P+ ++ S+++ + + G
Sbjct: 486 APCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDA 545
Query: 213 ---QVYKAI------------------QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
+VY + LG +E + A N L L + A
Sbjct: 546 IEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYA 605
Query: 252 -------ASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ +F+S+K L +++TYN ++ ++K + E E++L ++ + PD +
Sbjct: 606 KNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVV 665
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
+++ +I G + G I +A + M G P Y+ ++ Y S+ F E + M
Sbjct: 666 SYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYM 725
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
+N +P TY R++ K+++ +A E+
Sbjct: 726 IQHNLKPMELTYRRVVDSYCKAKRFEEARSFLSEV 760
>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
Length = 800
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 191/400 (47%), Gaps = 24/400 (6%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PN A +YNV++ L +R + +M G+ P+++T +I++ S AGQ+ +
Sbjct: 209 PNRA----TYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKE 264
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVI 274
A +L +ED G D + N L LC+ V A +++ G + + Y+ +I
Sbjct: 265 AENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLI 324
Query: 275 SGWSKLGQVVEMERVLKEIVAEG-FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
G G+ E + E++ + SPD + ++ +I G AGR +DA FD MKEKG
Sbjct: 325 DGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGF 384
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
PDT YN ++ GD D M N ++ TYT +I GL K + V +A++
Sbjct: 385 TPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQ 444
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLC-SYGPPHAAMMMYKKARKVG------CKLSLTAYK 446
VF+ M++ G PS T ++ L ++ A M+ YK +VG +L+L A +
Sbjct: 445 VFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKM--EVGNNPSLFLRLTLGANQ 502
Query: 447 L-----LLRRLSGFGKCGMLLDLWHEMQ---ESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ L + + + G +L + ++ +SG D Y ++ GLC + L+ A+
Sbjct: 503 VRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALR 562
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ E KGF + Y L + LL +++ A LF+ I
Sbjct: 563 LFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDI 602
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 181/447 (40%), Gaps = 88/447 (19%)
Query: 182 MCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE-DFGLKFDAESLNVVL 240
M + ++D G+ P ++ + AG+ ++A++ R+E +FG + N VL
Sbjct: 123 MYDAIADAQAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVL 182
Query: 241 WCLCQR-LHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
L V A +L+N M L N TYN++I G K G V+ ++ E+++ G
Sbjct: 183 RVLVASGGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGI 242
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
+P+ T + L+ + AG++ +A + +M++KGC PD YNA +S G DE ++
Sbjct: 243 TPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIE 302
Query: 359 ----------YYKGMSSYNC---------------------------EPNMDTYTRLISG 381
+ G+ Y+C P++ YT +I G
Sbjct: 303 RLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRG 362
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA---------------- 425
++ + DA F+EM ++G P T + L+ LC G
Sbjct: 363 CAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLD 422
Query: 426 -------------------AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
AM ++ +VGC S+ Y +L+ L + L++
Sbjct: 423 IHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFY 482
Query: 467 EMQESGYPS-------------DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
+M+ PS D E + ++ +C GQ+ A ++ + G P +
Sbjct: 483 KMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVV 542
Query: 514 VYSKLSNKLLASNKLESAYNLFRKIKI 540
Y+ L N L L+ A LFR++++
Sbjct: 543 TYNTLLNGLCKVRNLDGALRLFRELQV 569
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 189/434 (43%), Gaps = 39/434 (8%)
Query: 106 FLQKLKGKGVIEDAL-WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
F ++K KG D +N ++ + + G+L G ++ + NV D+
Sbjct: 375 FFDEMKEKGFTPDTFCYNT-------LLKALCDAGDLDGARSLM---SEMVRNNVVLDIH 424
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y ++ L + + D V M + G +P + T ++++D RA RL
Sbjct: 425 TYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAH----------RL 474
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN--SMKGKVLFNVMTYNIVISGWSKLGQ 282
E+ + F ++ VG SLF ++ + + T ++ + GQ
Sbjct: 475 EEARMLF-------------YKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQ 521
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V++ ++L+ I+ G PD +T++ L+ GL + +D A+ +F ++ KG D Y
Sbjct: 522 VLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGT 581
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR- 401
+I + + +++ + ++ + P+M Y ++ L + +K++ A+ ++ + L R
Sbjct: 582 LIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLWFDHLPRK 641
Query: 402 -GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
++ I+S + G H A+ K + ++ Y + L L G+
Sbjct: 642 YNLLAQDEVISSARKKF-EEGCLHEAVRELIKIDQEYGSVNSCPYTIWLIGLIQAGRIED 700
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L ++H ++ESG ++ LC G L AV VM +L+KGF R V ++L
Sbjct: 701 ALKIFHILEESGIDITPACCVHLSKYLCLEGNLGAAVDVMLYTLKKGFTMRRYVGNRLLC 760
Query: 521 KLLASNKLESAYNL 534
L ++ + A L
Sbjct: 761 SLCIHHRRKDAQAL 774
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 189/425 (44%), Gaps = 53/425 (12%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
+ D+ ++ V++ L R K D +VL + G PD T ++ +D +A +V A Q
Sbjct: 38 SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 97
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGW 277
+L ++++ + ++ L + + A ++ M KG + TY +VI G
Sbjct: 98 LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSP-TLKTYTVVIDGL 156
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG--- 334
SK G+V E R+ +++ G PD+ ++ LI GL + G++D+A+ + M E GC
Sbjct: 157 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGV 216
Query: 335 -PDTNAYNAVISNYISVGDFDECMKYY--------------------------------- 360
PD +N VI + G+ ++ + Y+
Sbjct: 217 EPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAF 276
Query: 361 -KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
K MS C P + TYT L+ G LK ++ +AL +E ++RG +P T TS ++ LC
Sbjct: 277 VKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCK 336
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSD 476
G + + R G + Y L + GF K M+ ++ +M +SG
Sbjct: 337 LGRVEEGCERFHEMRNRGYEPDAVTYAAL---IDGFMKAKMIPKAHRVYRQMLQSGTVVS 393
Query: 477 GEIYEYVIAGLCNIGQLENA---VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
Y ++ GLC G++ A L MEE +G + + YS L + + + +A
Sbjct: 394 TVTYNIILDGLCKAGRVAEAYATFLAMEE---RGCVATVVTYSALMDGFCSEGNVSAAVE 450
Query: 534 LFRKI 538
LFR++
Sbjct: 451 LFRRM 455
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 190/419 (45%), Gaps = 42/419 (10%)
Query: 162 DVKSYNVIVKALGRRKFFD----FMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
D Y ++ L + D ++ ++ + GV PD+ ++V+ +G + A
Sbjct: 180 DAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDA 239
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISG 276
+ L+D L + N ++ LC+ A + M + F + TY ++ G
Sbjct: 240 LAYFDELDD-SLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDG 298
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ KLG++ E LKE V GF PD++T++ +I+GL + GR+++ E F M+ +G PD
Sbjct: 299 FLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPD 358
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y A+I ++ + + Y+ M + TY ++ GL K+ +VA+A F
Sbjct: 359 AVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFL 418
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
M +RG V + T ++ ++ CS G AA+ ++++ GC+ +L +Y +++R L G
Sbjct: 419 AMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAG 478
Query: 457 K------------------------------CGML------LDLWHEMQESGYPSDGEIY 480
K C L ++L+ M G + Y
Sbjct: 479 KLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSY 538
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ G+C G LE + + E + +G P +V++ L L + +++ A +FR+++
Sbjct: 539 SILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELE 597
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 183/369 (49%), Gaps = 3/369 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++N +V AL + + + + M++ P L T + ++D F++ G++ +A+ L
Sbjct: 256 TFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEA 315
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
+ G DA + ++ LC+ V F+ M+ + + +TY +I G+ K +
Sbjct: 316 VERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMI 375
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ RV ++++ G ++T++ +++GL +AGR+ +A F M+E+GC Y+A+
Sbjct: 376 PKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSAL 435
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ + S G+ ++ ++ M CEPN+ +Y +I GL ++ K+A A FE++L R +
Sbjct: 436 MDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRL 495
Query: 404 VPSTGTITSFLEPLCS-YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P T SFL LC + +++ G +L +Y +L+ + G + L
Sbjct: 496 CPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTL 555
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+++HEM G D ++ +I LC G+++ A+ V E R+ P Y L + L
Sbjct: 556 EIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDAL 614
Query: 523 LASNKLESA 531
++E A
Sbjct: 615 SRCERMEEA 623
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 157/350 (44%), Gaps = 41/350 (11%)
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
+PD+ ++V++ R ++ +A +L R G + D + NV + LC+ V A
Sbjct: 38 SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 97
Query: 255 LFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
L M + K L +TY ++ G K G++ E +L+++V +G SP T++ +I+GL
Sbjct: 98 LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLS 157
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC----E 369
+AGR+++A +F M GC PD Y A+IS +G DE + Y M C E
Sbjct: 158 KAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVE 217
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P++ + +I L S + DAL F+E LD + + T + LC A+
Sbjct: 218 PDVVIHNLVIRQLCASGNLEDALAYFDE-LDDSLDLTHFTFNPLVAALCKAERTEEAIAF 276
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
KK + C +L Y L + G
Sbjct: 277 VKKMSERRCFPTLFTYTSL-----------------------------------VDGFLK 301
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+G+L+ A+L ++E++ +GF P + Y+ + + L ++E F +++
Sbjct: 302 LGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMR 351
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 136/279 (48%), Gaps = 8/279 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +Y I+ L + + C +M G PD T + ++D F++A + KA ++
Sbjct: 323 DAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVY 382
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++ G + N++L LC+ V A + F +M+ + + V+TY+ ++ G+
Sbjct: 383 RQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSE 442
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G V + + ++ G P+ ++++ +I GL RAG++ A F+ + ++ PD +
Sbjct: 443 GNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTF 502
Query: 341 NAVISNYI----SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
N+ + +VGD E ++ M S PN+ +Y+ L+ G+ ++ + LE+F
Sbjct: 503 NSFLHGLCQRLDTVGDGVE---LFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFH 559
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
EM+ RG+ P + + LC G A+ ++++ +
Sbjct: 560 EMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELER 598
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 118/243 (48%), Gaps = 3/243 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN+I+ L + M + G + T S +MD F G V A+++ R+
Sbjct: 396 TYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRM 455
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG-WSKLGQ 282
D G + + S N+++ LC+ + A F + + ++ +V T+N + G +L
Sbjct: 456 LDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDT 515
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V + + + +V++G SP+ ++S L++G+ RAG ++ +E+F M +G PD +N
Sbjct: 516 VGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNT 575
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I G DE ++ ++ + + P+ +Y L+ L + ++ +A + M +G
Sbjct: 576 LIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDALSRCERMEEARLLSFHMKLQG 634
Query: 403 IVP 405
P
Sbjct: 635 CAP 637
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 38/200 (19%)
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
DT A+++ G D M M C P+M +T +I+GL + +++ +A V
Sbjct: 8 DTRVCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVL 64
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
E + G P T F++ LC KA +V A++LL
Sbjct: 65 ERAVRAGCEPDYVTYNVFIDGLC-------------KAERVD-----DAFQLL------- 99
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
+M E Y ++ GL G+L+ A+ ++E+ + KG P+ Y
Sbjct: 100 ----------KKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTY 149
Query: 516 SKLSNKLLASNKLESAYNLF 535
+ + + L + ++E A +F
Sbjct: 150 TVVIDGLSKAGRVEEARRIF 169
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L+G K G L + E D + VI GLC +L+ A V+E ++R G P
Sbjct: 16 LNGLCKTGQLDRAMLLLDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPD 75
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y+ + L + +++ A+ L +K+
Sbjct: 76 YVTYNVFIDGLCKAERVDDAFQLLKKM 102
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 168/376 (44%), Gaps = 34/376 (9%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +V SYN ++ R+ D +V SDM + P++ T SI++D + G KA+
Sbjct: 500 MVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKAL 559
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
+ FD Q L + A + F T+N +I+G
Sbjct: 560 DL----------FD------------QMLSLNIAPTDF------------TFNTIINGLC 585
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K+GQ+ E LK + EGF P +T++ +++G + G ID A+ V+ M E G P+
Sbjct: 586 KVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVV 645
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
Y ++I+ + D +K M E ++ Y+ LI G K R + A ++F E+
Sbjct: 646 TYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFEL 705
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
L+ G+ P+ S + AA++ YKK L Y L+ L G+
Sbjct: 706 LEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRL 765
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
DL+ EM G D + ++ GLCN GQLENA ++EE RK PS L+Y+ L
Sbjct: 766 VFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTL 825
Query: 519 SNKLLASNKLESAYNL 534
L+ A+ L
Sbjct: 826 IAGYFREGNLKEAFTL 841
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 211/456 (46%), Gaps = 16/456 (3%)
Query: 99 EERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWA-IKHP 157
E + RGV L +I+ N +L L+++ ++ RG + EA A +
Sbjct: 285 ETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQG 344
Query: 158 NVAKDV----------KSYNVIV-----KALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
N+ + + K N++V K + D N+ + + ++G+ P+ T S
Sbjct: 345 NMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYS 404
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK 262
++++ +G + KA ++ +++ G+ ++N +L + AS LF+
Sbjct: 405 VLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDC 464
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ N+ TYNI++S K G++ E +L +V +G P+ ++++ +I G R G +D A
Sbjct: 465 GVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMAS 524
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
VF M + P+ Y+ +I GD ++ + + M S N P T+ +I+GL
Sbjct: 525 SVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGL 584
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K ++++A + + L+ G +PS T S ++ G +A+ +Y++ + G ++
Sbjct: 585 CKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNV 644
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L+ + + L EM+E G D Y +I G C +E+A + E
Sbjct: 645 VTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFE 704
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
L G P+R+VY+ + + N +E+A ++K+
Sbjct: 705 LLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKM 740
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 184/413 (44%), Gaps = 39/413 (9%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V N+++ AL RR + ++ + M G+ D T+ +++ + ++ G+V +A +
Sbjct: 225 VPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFR 284
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV-LFNVMTYNIVISGWSKLG 281
++ G+K DA + ++++ +C++ + L MK + + + T+ VI G
Sbjct: 285 ETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQG 344
Query: 282 QVVEMERVLKE-----------------------------------IVAEGFSPDSLTFS 306
+VE R+ +E I +G P+ +T+S
Sbjct: 345 NMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYS 404
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
LIEG +G I+ A E++ MK G P N+++ Y+ ++E K + +
Sbjct: 405 VLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFD--EAV 462
Query: 367 NCE-PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
+C N+ TY ++S L K K+ +A + + M+++G+VP+ + + C G
Sbjct: 463 DCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDM 522
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A ++ K ++ Y +L+ G LDL+ +M + +I
Sbjct: 523 ASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIIN 582
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GLC +GQ+ A ++ L +GF PS + Y+ + + + ++SA ++R++
Sbjct: 583 GLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREM 635
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 36/259 (13%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN IV + D V +M + GV+P++ T + +++ F ++ ++ A++ +
Sbjct: 611 TYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEM 670
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------KGKVLFNVM---------- 268
+ GL+ D + + ++ C+R + +A LF + ++++N M
Sbjct: 671 REKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNM 730
Query: 269 --------------------TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
TY +I G K G++V + E++++G PD +TF L
Sbjct: 731 EAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVL 790
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
+ GL G++++A ++ + M K P YN +I+ Y G+ E + M
Sbjct: 791 VNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGL 850
Query: 369 EPNMDTYTRLISGLLKSRK 387
P+ TY LI+G K +
Sbjct: 851 VPDDVTYDILINGKFKGDR 869
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 123/310 (39%), Gaps = 36/310 (11%)
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTY-NIVISGWSKLGQVVE 285
F + D N +L + + A FN+M + + + Y NI+++ + + E
Sbjct: 184 FDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGE 243
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+ + ++V G D T ++ + GR+++A E F KE+G D AY+ +I
Sbjct: 244 LRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQ 303
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
C K PN + LE+ EEM +RG VP
Sbjct: 304 AV--------CKK-----------PNSNL----------------GLELLEEMKERGWVP 328
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
S T TS + + G A+ + ++ G ++L L++ G L+L+
Sbjct: 329 SEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLF 388
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
+++ E G + Y +I G CN G +E A + + G PS + L L +
Sbjct: 389 NKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKA 448
Query: 526 NKLESAYNLF 535
E A LF
Sbjct: 449 PLWEEASKLF 458
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 123/297 (41%), Gaps = 6/297 (2%)
Query: 244 CQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
C LH+ S + K+L N +SG S VV ++ ++ F D
Sbjct: 138 CVLLHILMRSPETHGHARKLL------NRYVSGDSDPSPVVFVDHLINCAKRFDFELDHR 191
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
F++L+ RA RI++AI+ F+ M + P N +++ + E Y M
Sbjct: 192 VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKM 251
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ T ++ LK +V +A E F E +RG+ G + ++ +C
Sbjct: 252 VLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNS 311
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
+ + + ++ ++ G S + ++ G L L EM G P + + +
Sbjct: 312 NLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSL 371
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+ G C G L++A+ + + G P+++ YS L S +E A L+ ++K+
Sbjct: 372 MKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKL 428
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 180/401 (44%), Gaps = 10/401 (2%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F + VA + +YN I+ L + + ++ + G +PD+ T + ++DS
Sbjct: 23 IFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSL 82
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK---VLF 265
+AG + +A ++ G + G + + +V++ LC+ + A L M K VL
Sbjct: 83 CKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLP 142
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF--SPDSLTFSFLIEGLGRAGRIDDAIE 323
N++TYN + G K E +++ + SPD++TFS LI+GL + G+ID+A
Sbjct: 143 NIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACS 202
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
VFD M G P+ YNA+++ + + M P++ TY+ L+
Sbjct: 203 VFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFC 262
Query: 384 KSRKVADALEVFEEMLDRG-----IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
K+ +V +ALE+ M RG +VP T + C G A ++++
Sbjct: 263 KASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNL 322
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ + + L+ L G+ D+ M G P + Y ++ GLC G++E A
Sbjct: 323 QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQ 382
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+EE + G P + Y L L +++ + A L ++K
Sbjct: 383 FLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 423
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 179/405 (44%), Gaps = 10/405 (2%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG---VNPDLET 200
EA L K +V ++ +YN + L ++ C ++ + ++G V+PD T
Sbjct: 125 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSL-RDGSLRVSPDTVT 183
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
S ++D + GQ+ +A + + G + + N ++ LC+ + A ++ SM
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243
Query: 261 GK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP-----DSLTFSFLIEGLGR 314
K V +V+TY++++ + K +V E +L + + G +P D +TF+ LI G +
Sbjct: 244 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACK 303
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
AG + A +F+ M K PD + A+I G + M + PN+ T
Sbjct: 304 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 363
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y L+ GL KS ++ +A + EEM+ G VP + T S + LC A+ + + +
Sbjct: 364 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 423
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G Y +L+ L GK + + EM G+ D + +GL G L
Sbjct: 424 SFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLA 483
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ ++ L KG P S + + + S KL+ + ++ +
Sbjct: 484 GTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 156/345 (45%), Gaps = 11/345 (3%)
Query: 202 SIVMDSFIRAGQVYKAIQML-GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
+IV+ S RAG +A+++ G + G+ + N ++ LC+ +GA LF +
Sbjct: 5 NIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELV 64
Query: 261 GKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
+ +V+TYN +I K G + E R+ ++ + G P+ +T+S LI GL + GRID
Sbjct: 65 ERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRID 124
Query: 320 DAIEVFDTMKEKGCG--PDTNAYNAVISNYISVGDFDECMKYYKGM--SSYNCEPNMDTY 375
+A E+ M K C P+ YN+ + E + + + S P+ T+
Sbjct: 125 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF 184
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
+ LI GL K ++ +A VF++M+ G VP+ T + + LC A M +
Sbjct: 185 STLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD 244
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP-----SDGEIYEYVIAGLCNI 490
G + Y +L+ + L+L H M G D + +IAG C
Sbjct: 245 KGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKA 304
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
G E A + EE + K P + + L + L + ++E+A ++
Sbjct: 305 GNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL 349
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 137/278 (49%), Gaps = 11/278 (3%)
Query: 267 VMTYNIVISGWSKLGQVVEMERVLK-EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
V YNIV+ + G + + E+ +G +P +T++ +I GL ++ + +E+F
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ + E+G PD YN +I + GD +E + + MSS C PN+ TY+ LI+GL K
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 386 RKVADALEVFEEMLDRG--IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS-- 441
++ +A E+ +EM + ++P+ T SFL+ LC A + + R ++S
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180
Query: 442 LTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ L + G KCG + ++ +M GY + Y ++ GLC ++E A
Sbjct: 181 TVTFSTL---IDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHA 237
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
++E + KG P + YS L + +++++ A L
Sbjct: 238 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLH 275
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 414 LEPLCSYGPPHAAMMMYK-KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
L+ LC G A+ +++ + + G ++ Y ++ L G ++L+ E+ E G
Sbjct: 8 LQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERG 67
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
+ D Y +I LC G LE A + + +G P+ + YS L N L +++ A
Sbjct: 68 HHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEAR 127
Query: 533 NLFRKI 538
L +++
Sbjct: 128 ELIQEM 133
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 180/382 (47%), Gaps = 6/382 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
VA D +Y +++ L R ++L DM + G P++ T ++++++ R +A+
Sbjct: 139 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAM 198
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGW 277
+L + G + + NV++ +C+ V A L N + + ++Y ++ G
Sbjct: 199 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGL 258
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ ++E + E++ + P+ +TF LI R G ++ AI+V + M E GC +T
Sbjct: 259 CASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNT 318
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
N VI++ G D+ K M SY C P+ +YT ++ GL ++ + DA E+ E
Sbjct: 319 TLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNE 378
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ P+ T +F+ LC G A+M+ ++ + GC + + Y L+ G
Sbjct: 379 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGH 438
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV-YS 516
L+L+ M + Y ++ GLCN +L+ A ++ E LR G CP +V ++
Sbjct: 439 IDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVAEMLR-GDCPPNVVTFN 494
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
L + LE A L ++
Sbjct: 495 VLVSFFCQKGFLEEAIELVEQM 516
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 185/420 (44%), Gaps = 43/420 (10%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PNV +Y V+++A+ R F+ VL +M +G P++ T +++++ R G+V
Sbjct: 175 QPNVV----TYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 230
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF------NSMKGKVLF---- 265
A ++L RL +G + D S +L LC LF N M +V F
Sbjct: 231 DARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLI 290
Query: 266 --------------------------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS 299
N NIVI+ K G+V + ++L ++ + G +
Sbjct: 291 RFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCN 350
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
PD+++++ +++GL RA R DDA E+ + M C P+ +N I G ++ +
Sbjct: 351 PDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIML 410
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ MS + C + TY L++G + ALE+F M + P+T T T+ L LC+
Sbjct: 411 IEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCN 467
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
A + + + C ++ + +L+ G ++L +M E G +
Sbjct: 468 AERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLIT 527
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y ++ G+ E+A+ ++ + KG P + +S + L +++E A LF ++
Sbjct: 528 YNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQ 587
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 169/380 (44%), Gaps = 4/380 (1%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A DV +++ L RR VL G D+ + ++ + R G + A +
Sbjct: 73 APDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARR 132
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWS 278
++G + + DA + ++ LC R V A SL + M + NV+TY +++
Sbjct: 133 LIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMC 189
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
+ + VL E+ A+G +P+ +T++ +I G+ R GR+DDA E+ + + G PDT
Sbjct: 190 RNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTV 249
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
+Y ++ + +D+ + + M NC PN T+ LI + V A++V E+M
Sbjct: 250 SYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQM 309
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+ G +T + +C G A + GC +Y +L+ L +
Sbjct: 310 TEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERW 369
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+L +EM + P + + I LC G +E A++++E+ G + Y+ L
Sbjct: 370 DDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNAL 429
Query: 519 SNKLLASNKLESAYNLFRKI 538
N ++SA LFR +
Sbjct: 430 VNGFCVQGHIDSALELFRSM 449
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 179/411 (43%), Gaps = 41/411 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D SY ++K L K +D + + ++M ++ P+ T +++ F R G V +AIQ+L
Sbjct: 247 DTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVL 306
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN--VMTYNIVISGWSK 279
++ + G + N+V+ +C++ V A L N M G N ++Y V+ G +
Sbjct: 307 EQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDM-GSYGCNPDTISYTTVLKGLCR 365
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
+ + + +L E+V P+ +TF+ I L + G I+ AI + + M E GC
Sbjct: 366 AERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVT 425
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YNA+++ + G D ++ ++ M C+PN TYT L++GL + ++ A E+ EML
Sbjct: 426 YNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVAEML 482
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL---------- 449
P+ T + C G A+ + ++ + GC +L Y LL
Sbjct: 483 RGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSE 542
Query: 450 ---RRLSGFGKCGMLLD----------------------LWHEMQESGYPSDGEIYEYVI 484
L G G+ D L+H +Q+ G +Y ++
Sbjct: 543 DALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKIL 602
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
GLC +++NA+ + G P+ Y L L L+ A +L
Sbjct: 603 LGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLL 653
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 168/372 (45%), Gaps = 6/372 (1%)
Query: 126 DLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNV 185
+++ D++ + RG + E + +H A + N+++ ++ ++ D +
Sbjct: 283 EVTFDMLIRFFCRGGMV-ERAIQVLEQMTEH-GCATNTTLCNIVINSICKQGRVDDAFKL 340
Query: 186 LSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
L+DM G NPD + + V+ RA + A ++L + + + N + LCQ
Sbjct: 341 LNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQ 400
Query: 246 RLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
+ + A L M + V+TYN +++G+ G + + + + + P+++T
Sbjct: 401 KGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTIT 457
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
++ L+ GL A R+D A E+ M C P+ +N ++S + G +E ++ + M
Sbjct: 458 YTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMM 517
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
+ C PN+ TY L+ G+ K DALE+ ++ +G+ P T +S + L
Sbjct: 518 EHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIE 577
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A+ ++ + +G + Y +L L + +D + M +G + Y +I
Sbjct: 578 EAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILI 637
Query: 485 AGLCNIGQLENA 496
GL + G L+ A
Sbjct: 638 EGLAHEGLLKEA 649
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 112/243 (46%), Gaps = 4/243 (1%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +YN +V + D + M P+ T + ++ A ++ A +++
Sbjct: 423 VVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVA 479
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLG 281
+ + + NV++ CQ+ + A L M + N++TYN ++ G +K
Sbjct: 480 EMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDC 539
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ +L +V++G SPD +TFS +I L + RI++A+++F +++ G P YN
Sbjct: 540 SSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYN 599
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++ + D + ++ M S C PN TY LI GL + +A ++ + R
Sbjct: 600 KILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSR 659
Query: 402 GIV 404
G++
Sbjct: 660 GVL 662
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 61/138 (44%), Gaps = 3/138 (2%)
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G P T + LC G A + + A G + + AY L ++G+ + G L
Sbjct: 71 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTL---VAGYCRYGHL 127
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+ D Y +I LC+ G++ +A+ ++++ LR+G P+ + Y+ L
Sbjct: 128 DAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187
Query: 522 LLASNKLESAYNLFRKIK 539
+ ++ E A + +++
Sbjct: 188 MCRNSGFEQAMAVLDEMR 205
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 174/387 (44%), Gaps = 1/387 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+A D+ ++N+++ + F +V +++ K+G P+ TL+ ++ GQ+++A+
Sbjct: 87 IASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQAL 146
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ G + ++ LC+ AA L + GK V NV+ YN +I
Sbjct: 147 HFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSM 206
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K+ V E + E+V++G SPD +T+S LI G G+++DAI +F+ M + PD
Sbjct: 207 CKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDV 266
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
++ ++ + G E M +P++ TY L+ G ++V A +F
Sbjct: 267 YTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNT 326
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M G+ + + + C AM ++K+ + Y L+ L GK
Sbjct: 327 MAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGK 386
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L L EM + G P D Y ++ LC Q++ A+ ++ + +G P Y+
Sbjct: 387 ISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTI 446
Query: 518 LSNKLLASNKLESAYNLFRKIKIARQN 544
L + L +L+ A N+F + + N
Sbjct: 447 LIDGLCKGGRLKDAQNIFEDLLVKGYN 473
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 182/369 (49%), Gaps = 12/369 (3%)
Query: 106 FLQKLKGKGVIEDA-LWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
L+++ GK V + ++N +D V K+VN EA L+ K ++ DV
Sbjct: 183 LLRRVDGKLVQPNVVMYNTIIDSMCKV--KLVN------EAFDLYSEMVSK--GISPDVV 232
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y+ ++ + + + M E +NPD+ T SI++D F + G+V +A +L +
Sbjct: 233 TYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMM 292
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
G+K D + ++ C V A S+FN+M +G V NV +YNI+I+G+ K+ +V
Sbjct: 293 MKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKV 352
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E + KE+ + PD +T++ LI+GL ++G+I A+++ D M ++G D YN++
Sbjct: 353 DEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSI 412
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ D+ + M +P+M TYT LI GL K ++ DA +FE++L +G
Sbjct: 413 LDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGY 472
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+ T T ++ C A+ + K GC + Y++++ L + M
Sbjct: 473 NITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEK 532
Query: 464 LWHEMQESG 472
L EM G
Sbjct: 533 LLREMIARG 541
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 182/385 (47%), Gaps = 37/385 (9%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V +V YN I+ ++ + K + ++ S+M +G++PD+ T S ++ F
Sbjct: 192 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFC--------- 242
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+LG+L D A LFN M ++ +V T++I++ G+
Sbjct: 243 -ILGKLND-------------------------AIGLFNKMISEEINPDVYTFSILVDGF 276
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G+V E + VL ++ +G PD +T+ L++G +++ A +F+TM + G +
Sbjct: 277 CKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANV 336
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+YN +I+ + + DE M +K M N P++ TY LI GL KS K++ AL++ +E
Sbjct: 337 QSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDE 396
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M DRG+ T S L+ LC A+ + K + G + + Y +L+ L G+
Sbjct: 397 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGR 456
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+++ ++ GY Y +I G C+ + A+ ++ + G P+ Y
Sbjct: 457 LKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEI 516
Query: 518 LSNKLLASNKLESAYNLFRKIKIAR 542
+ L ++ + A L R++ IAR
Sbjct: 517 IILSLFEKDENDMAEKLLREM-IAR 540
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 36/282 (12%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV +++++V + NVL+ M K+G+ PD+ T +MD + QV KA
Sbjct: 262 INPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAK 321
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+ + G+ + +S N+++ C+ V A +LF M K ++ +V+TYN +I G
Sbjct: 322 SIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGL 381
Query: 278 SKLG-----------------------------------QVVEMERVLKEIVAEGFSPDS 302
K G QV + +L ++ EG PD
Sbjct: 382 CKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDM 441
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
T++ LI+GL + GR+ DA +F+ + KG Y +I + FD+ +
Sbjct: 442 YTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSK 501
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
M C PN TY +I L + + A ++ EM+ RG++
Sbjct: 502 MEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLL 543
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 103/248 (41%)
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
+E+ G + D +TF+ LI + G + VF + +KG P+ +I
Sbjct: 80 REMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLK 139
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
G + + ++ + + N Y LI+GL K + + AL++ + + + P+
Sbjct: 140 GQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMY 199
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+ ++ +C + A +Y + G + Y L+ GK + L+++M
Sbjct: 200 NTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMIS 259
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
D + ++ G C G+++ A V+ +++G P + Y L + ++
Sbjct: 260 EEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNK 319
Query: 531 AYNLFRKI 538
A ++F +
Sbjct: 320 AKSIFNTM 327
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 84/204 (41%)
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P + ++ + + + + + ++ M ++ T+ LI+ + + V
Sbjct: 54 PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F +L +G P+ T+T+ ++ LC G H A+ + K +G L+ Y L+ L
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G+ L L + + +Y +I +C + + A + E + KG P +
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233
Query: 515 YSKLSNKLLASNKLESAYNLFRKI 538
YS L + KL A LF K+
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKM 257
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 96/237 (40%)
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
+P F ++ L + AI + M+ G D +N +I+ + +G
Sbjct: 53 TPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFS 112
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
+ + EPN T T LI GL ++ AL ++++ G + + + LC
Sbjct: 113 VFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLC 172
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
G AA+ + ++ + ++ Y ++ + DL+ EM G D
Sbjct: 173 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 232
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
Y +I+G C +G+L +A+ + + + + P +S L + +++ A N+
Sbjct: 233 TYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVL 289
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 29/144 (20%), Positives = 57/144 (39%)
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F +L+ P L L A+ ++++ G L + +L+ S
Sbjct: 44 FNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQ 103
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G ++ + + GY + +I GLC GQ+ A+ ++ + GF +++
Sbjct: 104 LGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVC 163
Query: 515 YSKLSNKLLASNKLESAYNLFRKI 538
Y L N L + +A L R++
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRV 187
>gi|115448805|ref|NP_001048182.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|46805701|dbj|BAD17102.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497356|dbj|BAD19395.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537713|dbj|BAF10096.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|125583759|gb|EAZ24690.1| hypothetical protein OsJ_08460 [Oryza sativa Japonica Group]
gi|215704115|dbj|BAG92955.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766866|dbj|BAG99094.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 555
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 206/449 (45%), Gaps = 29/449 (6%)
Query: 117 EDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRR 176
E AL + +L+ +V V++R + FF WA + +YN ++ L
Sbjct: 100 EAALDALGAELTTPLVADVLHRLRYDEKLAFRFFVWASHQDGYEHEAATYNDVIDILSGT 159
Query: 177 KF----FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY--KAIQMLGRLED---- 226
++ F +C+VL M + T S+ +D + + Y K + L +L
Sbjct: 160 RYKARQFGVLCDVLDHMKRR------RTRSVPVDDLLGILRAYTEKHLTHLRKLAKKRRV 213
Query: 227 -FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE 285
+ ++LNV+L C+ V A +F+ +K K+L N TY+I+ GW +
Sbjct: 214 RMRTPPETDALNVLLDAFCKCGMVREAEVVFSRVKRKLLGNAETYSILFFGWCRARDPKR 273
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC---GPDTNAYNA 342
+VL+E++ +P++ T++ I+ AG + +A ++F+ M+ +G P Y+
Sbjct: 274 AMKVLEEMIQMKHTPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSI 333
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I+ G +EC + M C P++ TY LI G+L K+ A V +EM G
Sbjct: 334 MIAALAKAGQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAG 393
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P T FL+ LC A+ + ++ + C+ S+ Y +L+ + +
Sbjct: 394 FPPDIVTYNCFLKVLCGLQKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRAI 453
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
++W EM + G + YE +I GL + G+ E+A +++E + +G +L Y K +
Sbjct: 454 NIWIEMDKRGCHRAVDTYETMIDGLFDSGRTEDATALLDEVINRGM---KLSYKKFDAIM 510
Query: 523 LASNKLESAYNLFRKIKIARQNDYARRLW 551
L +L + NL I R +++ RR +
Sbjct: 511 L---RLSAVGNLG---AIHRLSEHMRRFY 533
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 203/424 (47%), Gaps = 33/424 (7%)
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
GNL+G FF+ ++ V+ + +Y+ ++ L + D +L D + +
Sbjct: 225 GNLTGAYE--FFD-SMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQA---GM 278
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
S ++ +A ++ +AIQ+L + + N ++ LCQ V A LF+
Sbjct: 279 FAFSSLLHGLCQAHRLEEAIQLLKAMPCVP---NVVCFNSLMNGLCQARRVDEAFELFDV 335
Query: 259 MK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV-AEGFSPDSLTFSFLIEGLGRAG 316
MK +V+TYNI++ G KL ++ E R ++ + EG SP+ +TFS LI+GL AG
Sbjct: 336 MKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAG 395
Query: 317 RIDDAIEVFDTMKE-KGCGPDTNAYNAVISNYISVGD---FDECM-----KYYKGMSSYN 367
R++ A EV++ M +G P+ Y ++ GD ++C + ++ SS+
Sbjct: 396 RVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWP 455
Query: 368 -------------CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
C P + TY L++GL KS V DAL + E M++ G+ P T S L
Sbjct: 456 IHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVL 515
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
+ LC A ++K+A + GC+ ++ Y L+ LS K L L +M E G
Sbjct: 516 DGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCR 575
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
++ Y V+ GL +G++E+AV+V+ + G P + Y+ L + +L A L
Sbjct: 576 ANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGL 635
Query: 535 FRKI 538
R++
Sbjct: 636 LREM 639
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 129/557 (23%), Positives = 231/557 (41%), Gaps = 68/557 (12%)
Query: 34 LSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVD 93
+++N +L K LD H+V K + PNV + S + + +D
Sbjct: 509 ITFNSVLDGLCKEQRILDAHNVFKRALE------RGCRPNVV--TYSTLIDGLSKMAKMD 560
Query: 94 EFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWA 153
E L L K+ G N VV ++ G + +VL
Sbjct: 561 EALQ--------LLAKMVELGC------RANTVTYSTVVDGLLKVGRMEDAVVVL---RQ 603
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ D +YN ++ +R+ +L +M + G +P + T + + R+G+
Sbjct: 604 MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGR 663
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK--VLFNVMTYN 271
+A+++L + G +A + + ++ LC+ V A F M V +V+ Y+
Sbjct: 664 FDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYS 723
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I G K G++ E L+ ++ G PD +TFS LI GL AGRID +E+F M E+
Sbjct: 724 ALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAER 783
Query: 332 GCGPDTNAYNAVISNYISVGDF-----------------------------------DEC 356
GC D AYNA+I+ Y G+F DE
Sbjct: 784 GCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEA 843
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
+ Y+ + +C + +Y LI+ L+ SR+ ALE+ M+ G P + ++
Sbjct: 844 VSYFHSIPE-DCRDEI-SYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDG 901
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
L G P A + ++ R G L Y +++ LS + + D + EM D
Sbjct: 902 LFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPD 961
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
+Y +I C ++++A ++ S G P+ +YS + + L + + A + R
Sbjct: 962 AIVYSSLIDAFCKADKVDDAWKLLRSS---GIEPTITMYSTMVDSLCKNRGTDKALEVIR 1018
Query: 537 KIKIARQNDYARRLWRS 553
++K ++ + +W S
Sbjct: 1019 EMK-SKNCEPGIHIWTS 1034
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 189/418 (45%), Gaps = 26/418 (6%)
Query: 154 IKHPNVAKDVKSYNVIVKALGR-RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+K + DV +YN+++K L + R+ + +V EG +P++ T S ++ AG
Sbjct: 336 MKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAG 395
Query: 213 QVYKAIQMLGR-----------------LEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
+V +A ++ R LE D+ L + +R ++S
Sbjct: 396 RVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWP 455
Query: 256 FNSMKGKVLF------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
+S + L ++TYN +++G SK G V + +L+ ++ G SPD +TF+ ++
Sbjct: 456 IHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVL 515
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
+GL + RI DA VF E+GC P+ Y+ +I + DE ++ M C
Sbjct: 516 DGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCR 575
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
N TY+ ++ GLLK ++ DA+ V +M D G +P T + ++ A+ +
Sbjct: 576 ANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGL 635
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
++ + G S+ Y L L G+ +++ M G + Y ++ GLC
Sbjct: 636 LREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCK 695
Query: 490 IGQLENAVLVMEESLR-KGFCPSRLVYSKLSNKLLASNKLESAYN-LFRKIKIARQND 545
G++ A+ E+ R + P + YS L + L + +++ AY L R I+ R D
Sbjct: 696 AGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPD 753
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 133/271 (49%), Gaps = 1/271 (0%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V+T+N V+ G K ++++ V K + G P+ +T+S LI+GL + ++D+A+++
Sbjct: 507 DVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLL 566
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
M E GC +T Y+ V+ + VG ++ + + M C P+ TY LI G K
Sbjct: 567 AKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKR 626
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+++ +A+ + EML+ G PS T T+ LC G A+ + GC + Y
Sbjct: 627 QRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITY 686
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI-YEYVIAGLCNIGQLENAVLVMEESL 504
++ L G+ L + +M + I Y +I GLC G+++ A +E +
Sbjct: 687 SSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMI 746
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
R G P + +S L N L + ++++ LF
Sbjct: 747 RAGRIPDVVTFSILINGLCDAGRIDTGLELF 777
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 182/405 (44%), Gaps = 33/405 (8%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A + +YN +V AL + ++L MA G P+L T +++ + G++ A +
Sbjct: 68 APNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFR 127
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-----NVMTYNIVI 274
++ + D G D E V+L LC+ V A F +VL + +TYN ++
Sbjct: 128 VVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQ----QVLLIGFTPDAVTYNTMV 183
Query: 275 SGWSKLGQVVEMERVLKEIVAEGF-SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
G K G+ +E ++ +++AE F SP TF+ ++GL +AG + A E FD+M + G
Sbjct: 184 DGLYKAGR-LEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
P+T Y+A+I G D + + N + M ++ L+ GL ++ ++ +A++
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIALGLLR---DKNSQAGMFAFSSLLHGLCQAHRLEEAIQ 299
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+ + M VP+ S + LC A ++ ++ GC + Y +LL+
Sbjct: 300 LLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLK--- 353
Query: 454 GFGKCGMLLDLWHEMQ----ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR-KGF 508
G K + + + ++ G + + +I GLCN G++ A V E + +G
Sbjct: 354 GLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGI 413
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYARRLWRS 553
P+R Y+ L L + F ++ R WRS
Sbjct: 414 SPNRFTYAFLLEGLCKAGDSRRLEQCFEQM--------LEREWRS 450
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 130/275 (47%), Gaps = 10/275 (3%)
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
++TYN++I+G K G+V + ++ + GF P +T+S +I+GL R +D ++ +
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M +GC P+ YN +++ + G E + M++ C P + T+ +I GL K
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
++ A V +EM+DRG VP T L LC G A +++ +G Y
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180
Query: 447 LLLRRLSGFGK---CGMLLDLWHEMQESGYPSDGEIYEYVIA--GLCNIGQLENAVLVME 501
++ L G+ GM+L L E S P+ ++ + IA GL G L A +
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSS--PT---VFTFTIAVDGLSKAGNLTGAYEFFD 235
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
+ G P+ + Y L + L + KL+ A L R
Sbjct: 236 SMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLR 270
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 155/342 (45%), Gaps = 9/342 (2%)
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
T +++++ +AG+V A + FG + + + V+ LC+ V L M
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 260 KGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
G+ N +TYN +++ G+ E +L+ + A G P+ +TF +I+GL + G I
Sbjct: 63 AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
+ A V D M ++G PD + ++ +G DE +++ + P+ TY +
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
+ GL K+ ++ A V + + + P+ T T ++ L G A + + G
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ Y L+ L GK + L L +++ + + ++ GLC +LE A+
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIALGL---LRDKNSQAGMFAFSSLLHGLCQAHRLEEAI- 298
Query: 499 VMEESLRKGFC-PSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ L+ C P+ + ++ L N L + +++ A+ LF +K
Sbjct: 299 ---QLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMK 337
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%)
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
M TY LI+GL K+ +V DA F + + G P+ T ++ ++ LC + +
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ GC + Y L+ L G G+ L M +G P + + +I GLC G
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++E A V++E + +GF P +++ L + L +++ A+ F+++
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQV 167
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 102/242 (42%), Gaps = 37/242 (15%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
P +D SYN ++ +L + + +L M +G +PD VMD +AG
Sbjct: 851 PEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEV 910
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISG 276
A ++L + G D + TY I+ISG
Sbjct: 911 AAKLLQEMRSRGHSPD----------------------------------LRTYTIMISG 936
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
SK Q+ +E++ + PD++ +S LI+ +A ++DDA + ++ G P
Sbjct: 937 LSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDA---WKLLRSSGIEPT 993
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y+ ++ + D+ ++ + M S NCEP + +T L + + +V +A+++
Sbjct: 994 ITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVN 1053
Query: 397 EM 398
++
Sbjct: 1054 DL 1055
>gi|125561327|gb|EAZ06775.1| hypothetical protein OsI_29018 [Oryza sativa Indica Group]
Length = 511
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 183/399 (45%), Gaps = 17/399 (4%)
Query: 156 HPNVA---KDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
HP A + +Y+ +V ALGR + FD ++ + A +G T +++ ++ AG
Sbjct: 93 HPPPAASSRAADAYDAVVDALGRARQFDAAWRLVVEAAADGAATP-RTFAVLARRYVAAG 151
Query: 213 QVYKAIQMLGRLEDF-GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYN 271
+A++ +E F G + DA +L LC+ + A+ +FN K K N Y
Sbjct: 152 MTRQAVRAFDDMEAFVGREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYKYEPNEKMYT 211
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG------RIDDAI--- 322
++I GW K+ + ++ LK+++ G P+ +T++ L+ G+ R R D +
Sbjct: 212 VLIYGWCKVNRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAA 271
Query: 323 -EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
++ M ++G PD +Y+ ++ Y + C+ ++ M P + TYT +I
Sbjct: 272 EDLLKEMHQRGIEPDVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKC 331
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L ++ DA + +EM G+ PS T F + + A+ +Y K + G +
Sbjct: 332 LASCGRLDDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPAT 391
Query: 442 --LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+ Y +LL + ++ +W++M ES D Y ++ GLC+ + A
Sbjct: 392 PDIHTYNILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQF 451
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
E + +GF P ++ + L L+ ++ L + L +++
Sbjct: 452 FMEMIERGFLPQKITFETLYRGLIQADMLRTWRRLKKRV 490
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 119/289 (41%), Gaps = 27/289 (9%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
Y+ V+ + Q R++ E A+G + TF+ L AG A+ FD M
Sbjct: 105 AYDAVVDALGRARQFDAAWRLVVEAAADGAA-TPRTFAVLARRYVAAGMTRQAVRAFDDM 163
Query: 329 KE-KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS-------YNCEPNMDTYTRLIS 380
+ G PD + ++ C Y +++ Y EPN YT LI
Sbjct: 164 EAFVGREPDAAEFTTLLDTL--------CKYKYPKVAAEVFNKRKYKYEPNEKMYTVLIY 215
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH----------AAMMMY 430
G K + A + ++M+ GI P+ T L +C + H AA +
Sbjct: 216 GWCKVNRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLL 275
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
K+ + G + +T+Y ++L S K + L ++ M+E G Y VI L +
Sbjct: 276 KEMHQRGIEPDVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASC 335
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G+L++A +++E +G CPS Y+ + + A L+ K+K
Sbjct: 336 GRLDDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMK 384
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 175/344 (50%), Gaps = 7/344 (2%)
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
++ N +++ L R D C +M P E + ++ + ++ ++ + + R
Sbjct: 267 EAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQR 326
Query: 224 LE---DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSK 279
++ +F + E+ N+++ LC+ + A L N M L +V+TY+ ++ G K
Sbjct: 327 MKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCK 386
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
LG++ +L+E+ EG PDS T + ++ L +AG++D A+ +TMK +G PD
Sbjct: 387 LGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVT 446
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YN ++ G DE + + M + C P++ +YT +I+ L +S + A A +F+EM+
Sbjct: 447 YNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMV 506
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
RG++P T S L+ L G A+ + K + CK +K+++ L GK
Sbjct: 507 KRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL---CKPDFVMHKMVVDGLCKAGKAE 563
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
++ M ++G+P+D Y V+ GL +G+++ A +++++
Sbjct: 564 DACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDA 607
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 201/432 (46%), Gaps = 25/432 (5%)
Query: 131 VVGKVVNR-GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDM 189
VVG+V+ G +S +V F+W + V +YN + AL + M
Sbjct: 7 VVGEVLRHLGKIS--TIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64
Query: 190 AKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHV 249
+ G PD T SIV+ +AG++ KA ++LG+L + G+K + + +VV+ C+ V
Sbjct: 65 QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRV 124
Query: 250 GAASSLFNSMK--GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
A +F +M G + +V+T+N ++ G ++ E + + + G P+ +++S
Sbjct: 125 DDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYST 184
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
L++GL +AGR+D+A +++ M EK C PD AY + ++ E + M +
Sbjct: 185 LLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKG 244
Query: 368 CEPNMDTYT-----------------RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
+ + ++ ++I L +S + +A + FEEM+ R PS
Sbjct: 245 SKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELF 304
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVG---CKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
+ + +C ++++++ + + C +L Y +++ L + +L +E
Sbjct: 305 NTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNE 364
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
M G D Y ++ GLC +G+L+ A ++EE ++G P + + N L + K
Sbjct: 365 MANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGK 424
Query: 528 LESAYNLFRKIK 539
++ A + +K
Sbjct: 425 VDYALSHLETMK 436
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 192/458 (41%), Gaps = 46/458 (10%)
Query: 96 LLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDV----------VGKVVN-----RGN 140
LL + R GV L + VI+ VD +L++ V VV +G
Sbjct: 95 LLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGL 154
Query: 141 LSGEAM---VLFFNWAIK---HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
SGE M + F + K PNV SY+ ++ L + D C + +M ++
Sbjct: 155 CSGERMSEAFVLFEYMAKAGCEPNVI----SYSTLLDGLCKAGRLDEACRLWEEMVEKSC 210
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
PDL + + +A +V +A ++ G K DA + + V+ LC++ H A
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ- 269
Query: 255 LFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
N +I + G + E + +E+++ P + F+ LI + +
Sbjct: 270 ----------------NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCK 313
Query: 315 AGRIDDAIEVFD---TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
+ R+ D + +F +MKE C P+ YN ++ N DE + M++Y P+
Sbjct: 314 SKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPD 373
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+ TY+ L+ GL K K+ A ++ EEM G+ P + T S L L G A+ +
Sbjct: 374 VVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLE 433
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ G L Y LL L G+ + +M + D Y +I LC G
Sbjct: 434 TMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSG 493
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
Q A + +E +++G P ++Y L + LA N LE
Sbjct: 494 QAAGAHAIFQEMVKRGVLPDTVLYHSLLDG-LARNGLE 530
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 179/360 (49%), Gaps = 4/360 (1%)
Query: 149 FFNWAIK---HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
F+++ + + N++ + S+N+++KAL + F D V M ++ PD T +M
Sbjct: 170 FYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLM 229
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF 265
D + ++ +A+ +L ++ G NV++ LC++ + + L ++M K F
Sbjct: 230 DGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCF 289
Query: 266 -NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
N +TYN +I G G++ + +L+ +V+ P+ +T+ LI GL + R D +
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARL 349
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
+M+E+G + + Y+ +IS G +E M +K M+ C PN+ Y+ +I GL +
Sbjct: 350 LISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCR 409
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
K +A E+ M+ G +P+ T +S ++ G A+ ++++ + GC +
Sbjct: 410 EGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFC 469
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y +L+ L G G+ + +W +M G D Y +I GLC IG ++ A+ + E L
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEML 529
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 206/427 (48%), Gaps = 18/427 (4%)
Query: 123 VNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYN-----VIVKALGRR- 176
V ++ S VV + + +L +A+ LF + + VKS+N +I + L R
Sbjct: 109 VIIERSFIVVFRAYGKAHLPEKAVDLFHRM-VDEFRCKRSVKSFNSVLNVIINEGLYHRG 167
Query: 177 -KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+F+D++ N +M ++P+ + ++V+ + + G V +AI++ + + D +
Sbjct: 168 LEFYDYVVNSNMNM---NISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYT 224
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
++ LC+ + A L + M+ + + + YN++I G K G + + +++ +
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMF 284
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
+G P+ +T++ LI GL G++D A+ + + M C P+ Y +I+ +
Sbjct: 285 LKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAM 344
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ + M N Y+ LISGL K K +A+ ++++M ++G P+ ++ +
Sbjct: 345 DGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVI 404
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM---LLDLWHEMQES 471
+ LC G P+ A + GC ++ Y L++ GF K G+ + +W EM E+
Sbjct: 405 DGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMK---GFFKTGLSEEAIQVWREMDET 461
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G + Y +I GLC +G+++ A++V + L G P + YS + L +++A
Sbjct: 462 GCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAA 521
Query: 532 YNLFRKI 538
L+ ++
Sbjct: 522 LKLYHEM 528
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 126/263 (47%), Gaps = 5/263 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV +Y ++ L +++ +L M + G + S+++ + G+ +A+
Sbjct: 324 IPNDV-TYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAM 382
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+ ++ + G + + + V+ LC+ A + N M L NV TY+ ++ G+
Sbjct: 383 TLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGF 442
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G E +V +E+ G S + +S LI+GL GR+ +A+ V+ M G PDT
Sbjct: 443 FKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDT 502
Query: 338 NAYNAVISNYISVGDFDECMKYYKGM---SSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
AY+++I +G D +K Y M +P++ TY L+ GL + V+ A+++
Sbjct: 503 VAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDL 562
Query: 395 FEEMLDRGIVPSTGTITSFLEPL 417
MLDRG P T +FL L
Sbjct: 563 LNCMLDRGCDPDVITCNTFLNTL 585
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 130/290 (44%), Gaps = 24/290 (8%)
Query: 144 EAMVLFFNWAIK--HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
EAM L+ A K PN+ Y+ ++ L R + +L+ M G P++ T
Sbjct: 380 EAMTLWKKMAEKGCRPNIV----VYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTY 435
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
S +M F + G +AIQ+ +++ G + +V++ LC V A +++ M
Sbjct: 436 SSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLT 495
Query: 262 -KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAE---GFSPDSLTFSFLIEGLGRAGR 317
+ + + Y+ +I G +G + ++ E++ + PD +T++ L++GL
Sbjct: 496 IGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKD 555
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
+ A+++ + M ++GC PD N ++ D +CE
Sbjct: 556 VSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSD--------------SCEEGRSFLEE 601
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
L++ LLK ++V+ A ++ E ML + + P T T + +C +AA+
Sbjct: 602 LVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICKPKKINAAI 651
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 174/378 (46%), Gaps = 1/378 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ DVK+ N I++ L + V M + G+ P + T + ++DS+ + G+V + +
Sbjct: 195 LSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGL 254
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+L ++ G + + NV++ L ++ A L M K + + TYN +I G+
Sbjct: 255 DLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGY 314
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
G + E + +E+V +G SP T++ I GL + GR+ DA++ M PD
Sbjct: 315 FNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDV 374
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+YN +I Y +G+ + + + S P + TY L+ GL + ++ A ++ E
Sbjct: 375 VSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVE 434
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M++ GI P T T + C G A + + G +L AY + G
Sbjct: 435 MINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGD 494
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L EM G+P D IY V+ GLC +G LE A ++++ + G P + Y+
Sbjct: 495 TSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTS 554
Query: 518 LSNKLLASNKLESAYNLF 535
+ + L + +L +F
Sbjct: 555 IIHAHLENGRLRKGREIF 572
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 177/375 (47%), Gaps = 1/375 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ + ++ +M +G +P + T + + + G++ A+Q L +
Sbjct: 306 TYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDM 365
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
L D S N +++ C+ ++ A LF+ ++ LF ++TYN ++ G + G++
Sbjct: 366 LANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGEL 425
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+++ E++ EG +PD +T++ L+ G + G + A E FD M +G D+ AY
Sbjct: 426 EVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATR 485
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I + +GD + M + P++ Y ++ GL K + +A E+ ++M+ G+
Sbjct: 486 IVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGV 545
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+P T TS + G ++ + G S+ Y +L+ +G G+
Sbjct: 546 IPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFI 605
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ EMQE G + Y +I GLC + +++ A E + KG P++ Y+ L N+
Sbjct: 606 YFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENC 665
Query: 524 ASNKLESAYNLFRKI 538
+ A +L++++
Sbjct: 666 NMGNWQEALSLYKQM 680
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 169/377 (44%), Gaps = 1/377 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
VK ++++ ++ + +V M K ++PD++ + ++ + KA+++
Sbjct: 164 VKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYR 223
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+ +FG+K + N +L C+ V L + M+ + N +TYN++I+G SK G
Sbjct: 224 TMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKG 283
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ + + ++ E++ G + T++ LI G G + +A+ + + M KG P YN
Sbjct: 284 EFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYN 343
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+ I +G + M+ M + N P++ +Y LI G + + A +F+E+
Sbjct: 344 SFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSI 403
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
+ P+ T + L+ LC G A + + G + Y +L+ G M
Sbjct: 404 YLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMA 463
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+ + EM G D Y I G +G A + EE L KGF P ++Y+ + +
Sbjct: 464 QEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDG 523
Query: 522 LLASNKLESAYNLFRKI 538
L LE A L +K+
Sbjct: 524 LCKLGNLEEASELLQKM 540
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 178/397 (44%), Gaps = 4/397 (1%)
Query: 137 NRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNP 196
N+G L+ EA+ L +K + V +YN + L + LSDM + P
Sbjct: 316 NKGMLA-EALSLQEEMVLK--GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLP 372
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
D+ + + ++ + R G + KA + L L + N +L LC++ + A L
Sbjct: 373 DVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLK 432
Query: 257 NSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
M + + +++TY I+++G K+G + + E++ EG DS ++ I G +
Sbjct: 433 VEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKL 492
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
G A + + M KG PD YN V+ +G+ +E + + M S P+ TY
Sbjct: 493 GDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY 552
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
T +I L++ ++ E+F EML +G+ PS T T + G A + + + ++
Sbjct: 553 TSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQE 612
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
G ++ Y L+ L + + + EM E G + Y +I CN+G +
Sbjct: 613 KGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQE 672
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
A+ + ++ L +G P +S L +L KL++ +
Sbjct: 673 ALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVH 709
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 111/269 (41%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V +++I +SK V + V +++ SPD + ++ L + A+EV+
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY 222
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
TM E G P YN ++ +Y G + + M C PN TY LI+GL K
Sbjct: 223 RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK 282
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+ A + EML G+ S T + + G A+ + ++ G ++ Y
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+ L G+ + +M + D Y +I G C +G L A L+ +E
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 402
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNL 534
P+ + Y+ L + L +LE A L
Sbjct: 403 IYLFPTIVTYNTLLDGLCRQGELEVAQQL 431
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 95/238 (39%), Gaps = 6/238 (2%)
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
LI + ++ + VFD M + PD N ++ + ++ Y+ M
Sbjct: 167 LDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMG 226
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
+ +P + TY L+ K KV L++ EM RG P+ T + L G
Sbjct: 227 EFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFE 286
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYE 481
A + + K G K+S Y L+ G+ GML L L EM G Y
Sbjct: 287 QAKGLIGEMLKTGLKVSAYTYNPLIY---GYFNKGMLAEALSLQEEMVLKGASPTVATYN 343
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I GLC +G++ +A+ + + L P + Y+ L L A+ LF +++
Sbjct: 344 SFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELR 401
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 173/358 (48%), Gaps = 1/358 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V++Y ++ L R + + M KEG+ P+ T + +++ G+ A+++
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF 396
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+E G + ++ N ++ LC + A LF M K L V+TYN +I+G+
Sbjct: 397 HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK 456
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G V R+L + G PD T++ L+ G + G+++ A F M E G P+ +Y
Sbjct: 457 GNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSY 516
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
A+I + G D + K M C PN+++Y +I+GL K + ++A ++ ++M++
Sbjct: 517 TALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVE 576
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G++P+ T T+ ++ LC G A ++ K C +L Y L+ L GK
Sbjct: 577 QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 636
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
L EM+ G D + +I G +G++++A L++ + G P+ YS L
Sbjct: 637 AEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVL 694
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 181/397 (45%), Gaps = 16/397 (4%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
E+++ FF W K P ++ + ++ L R + F ++ M K N +
Sbjct: 89 ESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEE------ 142
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
++ + L + G F S N +L L + V A +L+ M
Sbjct: 143 ---------EIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 193
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ +++T+N +I+ SK G+V E E +L +I SPD T++ LI G R +D A
Sbjct: 194 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAF 253
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
VFD M ++GC P++ Y+ +I+ + G DE + + M EP + TYT I+ L
Sbjct: 254 GVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITAL 313
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+A+E+ M RG P+ T T+ + L G A+ +Y K K G +
Sbjct: 314 CAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNT 373
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L+ L G+ L ++H M+ G ++ + Y +I GLC G +E A+++ E+
Sbjct: 374 VTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEK 433
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
L+ G P+ + Y+ L N L + +A L +K
Sbjct: 434 MLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK 470
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 179/383 (46%), Gaps = 1/383 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+++ DV +Y ++ R + D V M KEG +P+ T S +++ G+V +A
Sbjct: 228 DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEA 287
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
+ ML + + G++ + + + LC H A L MK + NV TY +ISG
Sbjct: 288 LDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISG 347
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
S+LG++ + +++ EG P+++T++ LI L GR A+++F M+ G +
Sbjct: 348 LSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLAN 407
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
T YN +I GD ++ M ++ M P + TY LI+G L V +A + +
Sbjct: 408 TQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLD 467
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
M + G P T + +G +A +++ + G + +Y L+ S G
Sbjct: 468 LMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDG 527
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K + L L M+E G + E Y VI GL + A + ++ + +G P+ + Y+
Sbjct: 528 KVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYT 587
Query: 517 KLSNKLLASNKLESAYNLFRKIK 539
L + L + + + A+ +F ++
Sbjct: 588 TLIDGLCRNGRTQFAFKIFHDME 610
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 191/415 (46%), Gaps = 20/415 (4%)
Query: 125 VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCN 184
VD +LD++ +++ +G + V +Y + + AL + +
Sbjct: 284 VDEALDMLEEMIEKG-------------------IEPTVYTYTLPITALCAIEHEEEAIE 324
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+++ M K G P+++T + ++ R G++ AI + ++ GL + + N ++ LC
Sbjct: 325 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 384
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
A +F+ M+G L N TYN +I G G + + + ++++ G P +
Sbjct: 385 VGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 444
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T++ LI G G +++A + D MKE GC PD YN ++S + G + Y++ M
Sbjct: 445 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 504
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
PN +YT LI G K KV AL + + M + G P+ + + + L
Sbjct: 505 VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRF 564
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A + K + G ++ Y L+ L G+ ++H+M++ + Y +
Sbjct: 565 SEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 624
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
I GLC G+ + A ++++E RKG P + ++ L + + +++ A+ L R++
Sbjct: 625 IYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 679
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 179/376 (47%), Gaps = 1/376 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S N ++ L + + + N+ M G+ P L T + +++ + G+V +A +L ++
Sbjct: 165 SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQI 224
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ L D + ++ C+ ++ A +F+ M K N +TY+ +I+G G+V
Sbjct: 225 FQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRV 284
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E +L+E++ +G P T++ I L ++AIE+ MK++GC P+ Y A+
Sbjct: 285 DEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTAL 344
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS +G + + Y M PN TY LI+ L + + AL++F M G
Sbjct: 345 ISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGS 404
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+ +T T ++ LC G AM++++K K+G ++ Y L+ G
Sbjct: 405 LANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAAR 464
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L M+E+G D Y +++G G+LE+A +E + G P+ + Y+ L +
Sbjct: 465 LLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHS 524
Query: 524 ASNKLESAYNLFRKIK 539
K++ A +L ++++
Sbjct: 525 KDGKVDIALSLLKRME 540
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 167/378 (44%), Gaps = 1/378 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV +Y ++ L + + FD V M G P+ T + ++ ++ G+ + +
Sbjct: 230 IPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVV 289
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
QML + GLK D + +L LC+ A F+SM K + V TY I+I G+
Sbjct: 290 QMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGY 349
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G + EM L +V G SPD F+ + G ID A+++F+ M++ G P+
Sbjct: 350 ATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNV 409
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y A+I +G D+ + M + PN+ + L+ GL K A E+ E
Sbjct: 410 VNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYE 469
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
MLD+GI P+ + + LC+ G + VG + +Y L+ G+
Sbjct: 470 MLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGR 529
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
++ M G Y ++ G C+ ++++A + E LRKG P + Y+
Sbjct: 530 TDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNT 589
Query: 518 LSNKLLASNKLESAYNLF 535
+ + L + + A L+
Sbjct: 590 ILHGLFQTKRFSEAKELY 607
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 190/407 (46%), Gaps = 13/407 (3%)
Query: 138 RGNLSGEAMVLFFNWAIKH--PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
R + + E V FN ++ VA ++ +Y++++ R + + K G
Sbjct: 63 RCSSASELAVSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWR 122
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQ-MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
D ++ ++ +V +A+ +L R+ + G D S ++L LC A
Sbjct: 123 MDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALE 182
Query: 255 LFNSMKG----KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
L + M + NV++Y+IVI+G+ GQV + + E++ G PD +T++ +I+
Sbjct: 183 LLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVID 242
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
GL +A D A VF M + G P+ YN +I Y+S+G + E ++ + MS+ +P
Sbjct: 243 GLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKP 302
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
+ TY L++ L K+ + +A F+ M+ +GI P T + + G
Sbjct: 303 DCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFL 362
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGL 487
+ G + + S + KCGM+ +D++++M++ G + Y +I L
Sbjct: 363 DLMVENGLSPDHHIFNIF---FSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDAL 419
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
C +G++++A + + + +G P+ +V++ L L +K E A L
Sbjct: 420 CKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEEL 466
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 161/364 (44%), Gaps = 8/364 (2%)
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
R FFD M ++G+ P + T I++ + G + + L + + GL D
Sbjct: 324 RFFFD-------SMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHI 376
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIV 294
N+ + + A +FN M+ L NV+ Y +I KLG+V + E +++
Sbjct: 377 FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI 436
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
EG +P+ + F+ L+ GL + + A E+ M ++G P+ +N +I N +VG
Sbjct: 437 NEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVM 496
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E + M P+ +YT LISG + + +A +VF+ M+ G+ P+ T + L
Sbjct: 497 EGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLL 556
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
CS A ++++ + G + Y +L L + +L+ M SG
Sbjct: 557 HGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 616
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
D Y ++ GLC ++ A + + KG + + ++ + LL + E A +L
Sbjct: 617 CDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDL 676
Query: 535 FRKI 538
F I
Sbjct: 677 FAAI 680
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 172/420 (40%), Gaps = 37/420 (8%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
FF+ I+ + V +Y +++ + M + L M + G++PD +I +
Sbjct: 325 FFFDSMIR-KGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSA 383
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK----- 262
+ + G + KA+ + ++ GL + + ++ LC+ V A FN M +
Sbjct: 384 YAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPN 443
Query: 263 -VLFNVMTY------------------------------NIVISGWSKLGQVVEMERVLK 291
V+FN + Y N +I +G+V+E R++
Sbjct: 444 IVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLID 503
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
+ G PD+ +++ LI G GR D+A +VFD M G P YN ++ Y S
Sbjct: 504 LMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSAS 563
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
D+ ++ M P + TY ++ GL ++++ ++A E++ M++ G T
Sbjct: 564 RIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYN 623
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
L LC A M++ G +L++ + +++ L G+ +DL+ + +
Sbjct: 624 IILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPAN 683
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G + Y V L G LE + + G P+ + + L +LL + A
Sbjct: 684 GLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 743
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 113/280 (40%), Gaps = 1/280 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++H V D SY ++ D V M G++P T + ++ + A +
Sbjct: 505 MEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 564
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF-NSMKGKVLFNVMTYNI 272
+ A + + G+ + N +L L Q A L+ N + ++ TYNI
Sbjct: 565 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 624
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+++G K V E ++ + + ++G + +TF+ +I L + GR +DA+++F + G
Sbjct: 625 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 684
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ Y V N I G +E + M PN L+ LL ++ A
Sbjct: 685 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAG 744
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
++ +R T + + S H A + +K
Sbjct: 745 AYLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSLPEK 784
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 113/274 (41%), Gaps = 53/274 (19%)
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS----------NYISVGDFDECMKYYKGM 363
R+ +DDA+++FD + A+N +++ + ++V F+ ++
Sbjct: 26 RSLGLDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRE---- 81
Query: 364 SSYNCEPNMDTYT-----------------------------------RLISGLLKSRKV 388
S PN+ TY+ +L+ GL ++V
Sbjct: 82 CSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRV 141
Query: 389 ADALEV-FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM-MMYKKARKVG--CKLSLTA 444
+A++V + M + G +P T + T L+ LC+ A+ +++ A G C ++ +
Sbjct: 142 GEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVS 201
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y +++ G+ +L+ EM + G P D Y VI GLC + A V ++ +
Sbjct: 202 YSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMI 261
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GF P+ Y+ L + L+ K + + ++
Sbjct: 262 DNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEM 295
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 170/374 (45%), Gaps = 5/374 (1%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
++ N ++ AL R M ++ + M +L T + +++++ AG + A + L
Sbjct: 43 IRCLNTLLMALARHGMLSDMESLAARMPVR----NLHTYTTLINAYCHAGDLPAAKRHLS 98
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
L GL D+ + + C+ A LF M + TY ++ G G
Sbjct: 99 SLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAG 158
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
V E V + +G +PDS +S ++ GL AGR +A+ + KG P+ YN
Sbjct: 159 MVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYN 218
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A+I Y S GD + + +KGM S C PN+ TYT+LI G KS KV A+ ++ M++
Sbjct: 219 ALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEA 278
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G+ P+ T T+ ++ CS G A + G + +L+ L G+
Sbjct: 279 GLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEA 338
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+ + G + IY +I LC G+ + A +M++ + +GF P +YS L +
Sbjct: 339 QQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDG 398
Query: 522 LLASNKLESAYNLF 535
L NKL A +L
Sbjct: 399 LCRENKLLEAISLL 412
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 153/364 (42%), Gaps = 1/364 (0%)
Query: 161 KDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
+++ +Y ++ A LS + + G+ PD + + + R G A ++
Sbjct: 72 RNLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRL 131
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSK 279
+ G + +L LC V A ++F M + Y+I++ G
Sbjct: 132 FLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCG 191
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G+ E +L + + +GF P+ ++ LI+G G ++ AI++F M+ KGC P+
Sbjct: 192 AGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRT 251
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y +I + G + M Y M PN+ TYT LI G + A + M
Sbjct: 252 YTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSME 311
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
G+ P+ T ++ LC +G A + G K++ Y ++ L GK
Sbjct: 312 ACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFD 371
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+L ++ G+ D +Y +I GLC +L A+ ++ + + G + + ++ L
Sbjct: 372 GAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILI 431
Query: 520 NKLL 523
+K L
Sbjct: 432 DKHL 435
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 156/355 (43%), Gaps = 30/355 (8%)
Query: 106 FLQKLKGKGVIED-ALWNVNVD---------LSLDVVGKVVNRGNLSGEAMVLFFNWAIK 155
L GKG + + A++N +D L++D+ + ++G L
Sbjct: 201 LLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCL-------------- 246
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PNV ++Y ++ + + + S M + G+ P++ T + ++ G +
Sbjct: 247 -PNV----RTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLE 301
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
A ++L +E GL + + V++ LC+ + A S+ K + N + Y +I
Sbjct: 302 HAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMI 361
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
K G+ ++++I+ EGF PD+ +S LI+GL R ++ +AI + + M E G
Sbjct: 362 DALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQ 421
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
+ + +I ++ D M++ +P++ TYT I + ++ DA +
Sbjct: 422 ANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESM 481
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
+M+D G+ P+ T + ++ + G A K GCK + +Y +LL
Sbjct: 482 MIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLL 536
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 110/269 (40%), Gaps = 4/269 (1%)
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
N ++ ++ G + +ME + + T++ LI AG + A ++
Sbjct: 47 NTLLMALARHGMLSDMESLAARMPVRNLH----TYTTLINAYCHAGDLPAAKRHLSSLLR 102
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
G PD++AY + + Y G F + + M C TY L+ GL + V +
Sbjct: 103 AGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVRE 162
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A+ VF M G P + + + LC G A+ + A G ++ Y L+
Sbjct: 163 AMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALID 222
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
G + +D++ MQ G + Y +I G C G++E A+++ + G P
Sbjct: 223 GYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAP 282
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + Y+ L + LE A+ L ++
Sbjct: 283 NVVTYTTLIQGQCSEGHLEHAFRLLHSME 311
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 126/313 (40%), Gaps = 52/313 (16%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y ++ AL + FD N++ + EG PD S ++D R ++ +AI +L +
Sbjct: 357 YTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMI 416
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
+ G++ +A +++ + + + + M V +V+TY + I + + G++
Sbjct: 417 ESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRME 476
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD-------- 336
+ E ++ +++ G P+ T++ LI+G G + A M + GC P+
Sbjct: 477 DAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLL 536
Query: 337 -----TNAYNAVISNYIS--------------------------------------VGDF 353
N+Y+ ++++ IS V
Sbjct: 537 GLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRL 596
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
+E + GM S N P+ D YT +I + + + +AL + M+ R +P +
Sbjct: 597 EEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFI 656
Query: 414 LEPLCSYGPPHAA 426
+ LC G H A
Sbjct: 657 ICALCEEGSFHTA 669
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 114/277 (41%), Gaps = 24/277 (8%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V DV +Y V +++ + + +++ M GV P+L T + ++ + G V +A
Sbjct: 455 VKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAF 514
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQR--LH--VGAASSLFNSMKGKVLFNVM------ 268
L + D G K + ES V+L L ++ H V + SL+ + KVL ++
Sbjct: 515 SSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKL 574
Query: 269 -------TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
Y+ I SK+ ++ E + L + + +P ++ +IE R + +A
Sbjct: 575 QCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEA 634
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+ D+M ++ P +Y +I G F + + S + + LI G
Sbjct: 635 LRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDG 694
Query: 382 LLKSRKVADALEVFEEMLDRGIVPS-------TGTIT 411
LL+ AD + M ++ P TG IT
Sbjct: 695 LLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTGEIT 731
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 219/475 (46%), Gaps = 32/475 (6%)
Query: 90 RAVDEFLLPEERLRGVFLQK---LKGKGVIEDALWNVNVDL---------------SLDV 131
R+++E L +R R VFL+K + K + L VDL S +
Sbjct: 78 RSLEEVLHQMKRERRVFLEKNFIVMFKAYGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNS 137
Query: 132 VGKVVNRGNLSGEAMVLFFNWAI--KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDM 189
V V+ + L A+ F+N + K N+ + ++N+++KA+ R D V ++
Sbjct: 138 VLNVIVQEGLFNRALE-FYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREI 196
Query: 190 AKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHV 249
PD T S +M + ++ +A+ +L ++ G + + NV++ LC++ +
Sbjct: 197 PLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDL 256
Query: 250 GAASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
G A+ L ++M KG V N +TYN ++ G G++ + +L ++V+ P+ +TF
Sbjct: 257 GRAAKLVDNMFLKGCVP-NEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGT 315
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI G GR D V +++ +G + Y+++IS G F++ M+ +K M
Sbjct: 316 LINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKG 375
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
C PN Y+ LI GL + K+ +A EM ++G +P++ T +S + G H A+
Sbjct: 376 CGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAI 435
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+++K+ C + Y +L+ L GK L +W +M G D Y +I G
Sbjct: 436 LVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGF 495
Query: 488 CNIGQLENAVLVMEESLRKG--FCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
CN +E + + + L +G P + Y+ L N ++FR I I
Sbjct: 496 CNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQK------SIFRAIDI 544
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 156/375 (41%), Gaps = 52/375 (13%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
++ + +G+L G A L N +K + +YN +V L + + ++L+ M
Sbjct: 246 LISALCKKGDL-GRAAKLVDNMFLK--GCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMV 302
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
P+ T +++ F+ G+ ++L LE G + + + ++ LC+
Sbjct: 303 SNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFN 362
Query: 251 AASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS--- 306
A L+ M GK N + Y+ +I G + G++ E L E+ +G+ P+S T+S
Sbjct: 363 QAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLM 422
Query: 307 --------------------------------FLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
LI GL + G+ +A+ V+ M +G
Sbjct: 423 RGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIK 482
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYN--CEPNMDTYTRLISGLLKSRKVADAL 392
D AY+++I + + ++ +K + M +P++ TY L++ + + A+
Sbjct: 483 LDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAI 542
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLC-SYGPPH--------AAMMMYKKARKVGCK--LS 441
++ MLD+G P T FL+ L + PP + + K+ R +G +
Sbjct: 543 DILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDELVVRLVKRQRTIGASKIIE 602
Query: 442 LTAYKLLLRRLSGFG 456
+ +K LL + S +
Sbjct: 603 VMMHKFLLPKASTWA 617
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/509 (21%), Positives = 217/509 (42%), Gaps = 29/509 (5%)
Query: 34 LSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVD 93
L+Y +L+ K D VL+E+ + + + V + R+D +R +
Sbjct: 40 LTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGD--RVDDARELV 97
Query: 94 EFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWA 153
E +L RG+ + +++ +D ++ +V + RG
Sbjct: 98 EEMLH----RGMAANAITYSALVDGLCKCERLDEAVALVETMAERG-------------- 139
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
A V +YN I+ R + D + M EG +PD+ T + ++ F ++
Sbjct: 140 -----CAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRD 194
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
V + +++LG + G D + + V+ LC+ + A +F M +TYN +
Sbjct: 195 VGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS--CAPTAITYNSL 252
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
I G+ + G + E R+L ++V + +PD +T++ L+ + GR+DDA E+F M
Sbjct: 253 IGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKL 312
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
PD + +++ G ++ ++ + ++ C P + TY ++ G K+ +V A E
Sbjct: 313 SPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEE 372
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG--CKLSLTAYKLLLRR 451
+ + RG VP+T T + C G A+ + G C S+ Y ++L
Sbjct: 373 LVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDA 432
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L G+ + + EM + GY + V+ LC Q + A ++EE ++ G P
Sbjct: 433 LCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPG 492
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+ + + ++ A L ++++
Sbjct: 493 PGTCDAVVSAYCRAGMIQKADELASELRL 521
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 188/444 (42%), Gaps = 78/444 (17%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
V+G + G L A+ ++ HP D +Y +V L + + VL +M
Sbjct: 11 VIGGLCRAGRLR-HALGVYRQMNDAHP---PDFLTYTKLVHGLSKARRLRDAVQVLQEMV 66
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
PD TL++V+ S +V A +++ + G+ +A + + ++ LC+ +
Sbjct: 67 SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLD 126
Query: 251 AASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG------------ 297
A +L +M + V+TYN +I+G+ + +V E ++++VAEG
Sbjct: 127 EAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALI 186
Query: 298 -----------------------FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
F+PD +T+S +I+GL +AGR+ DA+++F+ M C
Sbjct: 187 GGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CA 243
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P YN++I Y GD DE ++ M C P++ TYT L+S K ++ DA E+
Sbjct: 244 PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYEL 303
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F++M+ + P T TS ++ LC G
Sbjct: 304 FQQMVANKLSPDVVTFTSLVDGLC-----------------------------------G 328
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G+ L+L E+ G P Y V+ G C Q+ A ++ + +GF P+ +
Sbjct: 329 EGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVT 388
Query: 515 YSKLSNKLLASNKLESAYNLFRKI 538
Y+ L + + + A ++
Sbjct: 389 YNILVAGCCRAGRTDQALQYLDQL 412
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 170/370 (45%), Gaps = 5/370 (1%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
+NV++ L R V M + PD T + ++ +A ++ A+Q+L +
Sbjct: 8 HNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMV 66
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
D +L VV+ LC V A L M + + N +TY+ ++ G K ++
Sbjct: 67 SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLD 126
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E +++ + G +P +T++ +I G RA R+D+A + M +GC PD Y A+I
Sbjct: 127 EAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALI 186
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ D ++ ++ P++ TY+ +I GL K+ ++ DA+++FEEM
Sbjct: 187 GGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCA 243
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P+ T S + C G A+ + K C + Y L+ G+ +L
Sbjct: 244 PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYEL 303
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+ +M + D + ++ GLC G++E+A+ ++EE R+G P+ Y+ + +
Sbjct: 304 FQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCK 363
Query: 525 SNKLESAYNL 534
+N++ A L
Sbjct: 364 ANQVRKAEEL 373
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 152/337 (45%), Gaps = 38/337 (11%)
Query: 237 NVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAE 296
NVV+ LC+ + A ++ M + +TY ++ G SK ++ + +VL+E+V+
Sbjct: 9 NVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSA 68
Query: 297 GFSPD-----------------------------------SLTFSFLIEGLGRAGRIDDA 321
PD ++T+S L++GL + R+D+A
Sbjct: 69 RHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEA 128
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+ + +TM E+GC P YN++I+ + DE + + M + C P++ TYT LI G
Sbjct: 129 VALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGG 188
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
KSR V LE+ E+ RG P T ++ ++ LC G A+ +++ ++ C +
Sbjct: 189 FCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE---EMSCAPT 245
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
Y L+ G + L +M + D Y +++ C +G+L++A + +
Sbjct: 246 AITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQ 305
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ + P + ++ L + L ++E A L +I
Sbjct: 306 QMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 342
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 118/277 (42%), Gaps = 38/277 (13%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+ +N+VI G + G++ V +++ + PD LT++ L+ GL +A R+ DA++V
Sbjct: 4 GTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQVL 62
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGD-FDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
M PD V+ + + +GD D+ + + M N TY+ L+ GL K
Sbjct: 63 QEMVSARHVPDNTTLTVVVQS-LCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
++ +A+ + E M +RG P+ T S + C +AR+V
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFC-------------RARRVD------- 161
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
GF +M G D Y +I G C + + ++ E
Sbjct: 162 ------EAHGF---------MEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVT 206
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
R+GF P + YS + + L + +L A ++F ++ A
Sbjct: 207 RRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA 243
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 172/345 (49%), Gaps = 1/345 (0%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P L + S + Q + + +++ FG+ + +LN+++ LC+ H+ A S+
Sbjct: 84 PSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSV 143
Query: 256 FNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
+ M K + + +T+ +I+G G++ E + E+ P+++TF+ L++ L +
Sbjct: 144 LSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCK 203
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G + +A VF+TM EKG P+ YNA+++ Y + ++ K ++ M C P++ +
Sbjct: 204 KGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHS 263
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y+ LI+G KSR++ +A + +M ++ ++P+T T + ++ LC A ++KK
Sbjct: 264 YSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMC 323
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G +L Y +LL L G L L MQE D +Y +I G+ G+LE
Sbjct: 324 SSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLE 383
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
A + + G PS Y+ + LL + AY LFRK++
Sbjct: 384 VAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKME 428
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 189/409 (46%), Gaps = 5/409 (1%)
Query: 133 GKVVNRGNLSG--EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
G V N N G +AM F+ H N + ++ ++K + + ++ + M
Sbjct: 56 GFVSNNSNDIGIDDAMASFYRMI--HMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMD 113
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
GV + TL+I+++S R ++ A+ +L ++ G++ D+ + ++ LC +
Sbjct: 114 LFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIK 173
Query: 251 AASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A LFN M G+ + N +T+ I++ K G V E V + + +G P+ T++ L+
Sbjct: 174 EAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALM 233
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
G ++DA +VF+ M KGC P ++Y+ +I+ Y DE MS
Sbjct: 234 NGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELI 293
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
PN TY L+ GL + + +A E+F++M G++P+ T + L+ LC +G A+ +
Sbjct: 294 PNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKL 353
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
++ + + Y +L++ + GK + +L+ ++ +G Y +I GL
Sbjct: 354 LTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLK 413
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G + A + + GF P Y+ + L + +A L ++
Sbjct: 414 EGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEM 462
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 168/351 (47%), Gaps = 1/351 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
VA + + N+++ +L R F +VLS M K G+ PD T + +++ G++ +A+
Sbjct: 117 VAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAV 176
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ + + + +++ LC++ V A +F +M K V N+ TYN +++G+
Sbjct: 177 ELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGY 236
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
++ + +V + +V +G +P ++S LI G ++ RID+A + M EK P+T
Sbjct: 237 CLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNT 296
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN ++ E + +K M S PN+ TY+ L+ GL K + +AL++
Sbjct: 297 VTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTS 356
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M +R + P ++ + G A ++ K G + S+ Y ++++ L G
Sbjct: 357 MQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGL 416
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L+ +M++ G+ D Y +I G A+ +++E + + F
Sbjct: 417 SDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRF 467
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 142/299 (47%), Gaps = 6/299 (2%)
Query: 118 DALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRK 177
DA+ N ++ ++ V+ + + EA +F K V ++ +YN ++ R
Sbjct: 186 DAMPNT---VTFTILVDVLCKKGMVSEARCVFETMTEK--GVEPNIYTYNALMNGYCLRL 240
Query: 178 FFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLN 237
+ V M +G P + + SI+++ + ++ ++ +A +L ++ + L + + N
Sbjct: 241 EMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYN 300
Query: 238 VVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAE 296
++ LC + A LF M +L N+ TY+I++ G K G + E ++L +
Sbjct: 301 TLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQER 360
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
PD + ++ LI+G+ AG+++ A E+F + G P YN +I + G DE
Sbjct: 361 KLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEA 420
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
K ++ M P+ +Y +I G L+++ + A+++ +EM+ R + T L+
Sbjct: 421 YKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 77/194 (39%), Gaps = 2/194 (1%)
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
T +K P N +SN + D+ M + M N P+ + + + K +
Sbjct: 43 TCTKKPSLPQNNG--GFVSNNSNDIGIDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKK 100
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+ + + + +M G+ + T+ + LC H A+ + K K+G + +
Sbjct: 101 QYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFT 160
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+ L G+ ++L++EM + + ++ LC G + A V E K
Sbjct: 161 TLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEK 220
Query: 507 GFCPSRLVYSKLSN 520
G P+ Y+ L N
Sbjct: 221 GVEPNIYTYNALMN 234
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 186/393 (47%), Gaps = 7/393 (1%)
Query: 149 FFNWAI--KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
F+N I K N++ +V ++N+++K + + D + DM PD+ T +MD
Sbjct: 153 FYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMD 212
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVL 264
+A ++ +A+ +L ++ G + NV++ LC++ + + L ++M KG
Sbjct: 213 GLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKG-CA 271
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
N +TYN +I G G++ + +L +V+ P+ +T+ +I GL + GR D V
Sbjct: 272 PNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARV 331
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
M+E+G + Y+A+IS G E M+ +K M+ CE N Y+ +I GL +
Sbjct: 332 LALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCR 391
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
K +ALEV EM + P+ T +S ++ G H A+ M+K K +
Sbjct: 392 DGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVC 451
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y +L+ L GK + +W +M G D Y +I GL N G +E+A+ + E L
Sbjct: 452 YSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEML 511
Query: 505 --RKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
P + Y+ L N L + + A +L
Sbjct: 512 CQEPDSQPDVVTYNILLNALCKQSSISRAIDLL 544
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 124/291 (42%), Gaps = 38/291 (13%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ L + + ++L M P++ T +++ ++ G+ ++L +
Sbjct: 276 TYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALM 335
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
E+ G + + ++ L + A LF M K N + Y+ VI G + G+
Sbjct: 336 EERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKP 395
Query: 284 VEMERVL-----------------------------------KEIVAEGFSPDSLTFSFL 308
E VL K++ F+ + + +S L
Sbjct: 396 DEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVL 455
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM--SSY 366
I GL + G++ +A+ V+ M KGC PD AY ++I+ + G ++ ++ Y M
Sbjct: 456 IHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEP 515
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+ +P++ TY L++ L K ++ A+++ MLDRG P T FL L
Sbjct: 516 DSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTL 566
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 130/292 (44%), Gaps = 25/292 (8%)
Query: 142 SGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
S EAM LF +K + V Y+ ++ L R D VLS+M P+ T
Sbjct: 360 SQEAMQLFKEMTVKECELNTIV--YSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTY 417
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
S +M F AG +KAI+M + + +V++ LC+ V A ++ M G
Sbjct: 418 SSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLG 477
Query: 262 K-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAE--GFSPDSLTFSFLIEGLGRAGRI 318
K +V+ Y +I+G S G V + ++ E++ + PD +T++ L+ L + I
Sbjct: 478 KGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSI 537
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT---Y 375
AI++ ++M ++GC PD C+ + + + +P D
Sbjct: 538 SRAIDLLNSMLDRGCDPD----------------LVTCIIFLRTLRE-KLDPPQDGREFL 580
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
L+ LLK ++V A ++ E ML + + P T T +E LC+ AA+
Sbjct: 581 DGLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAI 632
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 124/295 (42%), Gaps = 21/295 (7%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
T+ +I ++ LG +E+VL + E F + + G+A + A+ +FD M
Sbjct: 62 TFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRM 121
Query: 329 K-EKGCGPDTNAYNAVISNYISVGDFDECMKYYK---GMSSYNCEPNMDTYTRLISGLLK 384
E C ++N+V++ I G F +++Y G N PN+ T+ +I + K
Sbjct: 122 AYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCK 181
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
V DA+++F +M P T + ++ LC A+ + + + GC S
Sbjct: 182 VGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVT 241
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
+ +L+ L G + L M G + Y +I GLC G+LE A+ +++ +
Sbjct: 242 FNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMV 301
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYAR--RLWRSKGWH 557
P+ + Y + N L +K R D AR L +G+H
Sbjct: 302 SSKCVPNVVTYGTIINGL---------------VKQGRALDGARVLALMEERGYH 341
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 91/251 (36%), Gaps = 46/251 (18%)
Query: 334 GPDTNAYN-------AVISNYISVGDFDECMKYYKGMS---------------------- 364
GP +Y ++I NY ++GDF K M
Sbjct: 50 GPKMGSYKLGDSTFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAH 109
Query: 365 --------------SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR---GIVPST 407
+ C+ + ++ +++ +++ ALE + ++ I P+
Sbjct: 110 LPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNV 169
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T ++ +C G A+ M++ C+ + Y L+ L + + L E
Sbjct: 170 LTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDE 229
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
MQ G + +I GLC G L +++ KG P+ + Y+ L + L K
Sbjct: 230 MQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGK 289
Query: 528 LESAYNLFRKI 538
LE A +L ++
Sbjct: 290 LEKAISLLDRM 300
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 184/380 (48%), Gaps = 37/380 (9%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V S N ++ AL + F + V +M + ++P+L T + V++ + G++ KA ++
Sbjct: 195 VLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVD 254
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQ 282
++ +G W NV+TYN +I G+ K+G+
Sbjct: 255 DMKVWGF-----------W-----------------------PNVVTYNTLIDGYCKMGR 280
Query: 283 VVEM---ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
V +M + +LKE+V SP+S+TF+ LI+G + + A++VF+ M+ +G P
Sbjct: 281 VGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVT 340
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YN++++ + G +E M S N +PN+ TY LI+G K + + +A E+F+ +
Sbjct: 341 YNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIG 400
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
+G+ P+ T + L C +G A ++ K + G + + Y L+ GK
Sbjct: 401 KQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKME 460
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ +L +EMQ G +D Y +I+ C + + A +++E L KG PS L Y+ L
Sbjct: 461 EVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILL 520
Query: 520 NKLLASNKLESAYNLFRKIK 539
N L +A NL ++++
Sbjct: 521 NGYCMEGNLRAALNLRKQME 540
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 180/369 (48%), Gaps = 4/369 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI---RAGQVY 215
++ ++ ++N ++ L + + +V+ DM G P++ T + ++D + R G++Y
Sbjct: 226 ISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMY 285
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVI 274
KA +L + + + ++ + NV++ C+ ++ AA +F M+ + L V+TYN ++
Sbjct: 286 KADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 345
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G G++ E + +L E+++ P+ +T++ LI G + +++A E+FD + ++G
Sbjct: 346 NGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLT 405
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ +N ++ Y G +E K M PN TY LI G + K+ + +
Sbjct: 406 PNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNL 465
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
EM RG+ T T + C P A + + G K S Y +LL
Sbjct: 466 LNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCM 525
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G L+L +M++ G ++ Y +I G C G+LE+A ++ E L KG P+R
Sbjct: 526 EGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTT 585
Query: 515 YSKLSNKLL 523
Y + +++
Sbjct: 586 YEIIKEEMM 594
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 198/421 (47%), Gaps = 33/421 (7%)
Query: 129 LDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSD 188
+D + +++ G++ ++ +FNW+ + NV +Y++ + +C +L+
Sbjct: 73 IDFLHQLMGSGDVDPLLVLRYFNWSRRELNV-----NYSI-----------ELICRLLNL 116
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML-GRLEDFGLKFDAESL---NVVLWCLC 244
+A P + + ++DSF++ G+ +I ++ L +F A S+ +VL +
Sbjct: 117 LANAKHYPKIRS---ILDSFVK-GETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVE 172
Query: 245 QRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
V + + + +V++ N ++S K + +E V KE++ SP+ +T
Sbjct: 173 NSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLIT 232
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK---YYK 361
F+ +I GL + G+++ A +V D MK G P+ YN +I Y +G + K K
Sbjct: 233 FNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILK 292
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M PN T+ LI G K ++ AL+VFEEM +G+ P+ T S + LC+ G
Sbjct: 293 EMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEG 352
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGE 478
+ A ++ + K ++ Y L ++G+ K +L +L+ + + G +
Sbjct: 353 KLNEAKVLLDEMLSSNLKPNVITYNAL---INGYCKKKLLEEARELFDNIGKQGLTPNVI 409
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ ++ G C G++E A L+ + L KGF P+ Y+ L K+E NL ++
Sbjct: 410 TFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEM 469
Query: 539 K 539
+
Sbjct: 470 Q 470
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 134/299 (44%), Gaps = 36/299 (12%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+ + ++NV++ + + V +M +G+ P + T + +++ G++ +A
Sbjct: 299 VSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAK 358
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+L + LK + + N ++ C++ + A LF+++ K + NV+T+N ++ G+
Sbjct: 359 VLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGY 418
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD----------------- 320
K G++ E + K ++ +GF P++ T++ LI G R G++++
Sbjct: 419 CKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADT 478
Query: 321 ------------------AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
A + D M +KG P YN +++ Y G+ + K
Sbjct: 479 VTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQ 538
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M N+ TY LI G + K+ DA + EML++G++P+ T E + G
Sbjct: 539 MEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKG 597
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 85/160 (53%), Gaps = 1/160 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+ +YN ++ R + + N+L++M GV D T +I++ ++ + KA +++
Sbjct: 442 NASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLI 501
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
+ D GLK + N++L C ++ AA +L M+ + + NV+TYN++I G+ +
Sbjct: 502 DEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRK 561
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
G++ + +L E++ +G P+ T+ + E + G + D
Sbjct: 562 GKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPD 601
>gi|296081511|emb|CBI20034.3| unnamed protein product [Vitis vinifera]
Length = 596
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 172/335 (51%), Gaps = 1/335 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L NVDLS +V V+ R + + FF WA + + ++YN ++ LGR
Sbjct: 177 MEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGR 236
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ F+ M +L +M ++G+ +ET SI + +F A + KA+ + ++ + ++
Sbjct: 237 TRQFESMMGMLGEMGEKGLL-TMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDT 295
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
+N +L L + A +LF ++ + N+ TY ++++GW ++ +VE R E++
Sbjct: 296 INCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMID 355
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+GF PD + ++EGL + + DAI++F+ MK KG P+ Y +I + E
Sbjct: 356 KGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQE 415
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
++Y+ M C+P+ YT LI+G +K+ + +EM ++G T + ++
Sbjct: 416 AVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIK 475
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
+ + P A+ +YKK + G + +L Y ++++
Sbjct: 476 LMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMK 510
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 197/436 (45%), Gaps = 45/436 (10%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K + +V +YN+++KAL + D + +M+ +G PD T + ++ S +AG+
Sbjct: 170 MKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGK 229
Query: 214 ----------------VYKA--------------IQMLGRLEDFGLKFDAESLNVVLWCL 243
VY A I++LG + D G+ + S + ++ L
Sbjct: 230 IDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289
Query: 244 CQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
C +V A +LF M +G N+ T+ +I G G++ E + K ++ +G P+
Sbjct: 290 CVSGNVELAFALFAQMFLRG-CDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPN 348
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+ ++ LI GL G +++A++V D M+ GC P+ Y+ +I + GD + +
Sbjct: 349 VVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWN 408
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M S+ C PN+ TYT ++ L K+ A + E+M G P+T T +F++ LC G
Sbjct: 409 RMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNG 468
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
AM + ++ + GC ++T Y LL L K L+ E++ + Y
Sbjct: 469 RVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYN 528
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
V+ G G + A+ + ++L +G P + Y N + AY K+KIA
Sbjct: 529 TVLYGFSRAGMMGEALQLFGKALVRGTAPDSITY----------NTMIHAYCKQGKVKIA 578
Query: 542 RQNDYARRLWRSKGWH 557
Q R+ K WH
Sbjct: 579 AQ--LVERVSSMKEWH 592
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 203/445 (45%), Gaps = 41/445 (9%)
Query: 130 DVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS-YNVIVKALGRRKFFDFMCNVLSD 188
DV+ ++ NLS VL F AI + N + S Y V+++ LGR D + +L
Sbjct: 43 DVLKRLKTDRNLSS---VLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQ 99
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M +G+N + +++ + R G +A++M R+ +FG K N +L L
Sbjct: 100 MKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENK 159
Query: 249 VGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ L+ +MK L NV TYNI++ K +V ++ E+ +G PD++T++
Sbjct: 160 FQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTT 219
Query: 308 LIEGLGRAGRIDD------------------------------AIEVFDTMKEKGCGPDT 337
++ L +AG+IDD AI++ M + G P+
Sbjct: 220 MVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNV 279
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+Y+ +I++ G+ + + M C+ N+ T+T LI G K+ +AL++++
Sbjct: 280 VSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKL 339
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ G P+ + + LCS G A+ + + ++ GC ++T Y +L + GF K
Sbjct: 340 MIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSIL---IDGFAK 396
Query: 458 CGMLL---DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G L+ + W+ M G + Y ++ LC + A ++E+ +G P+ +
Sbjct: 397 SGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMT 456
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
++ L + ++E A L +++
Sbjct: 457 FNTFIKGLCGNGRVEWAMKLLERMQ 481
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 167/364 (45%), Gaps = 6/364 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V +V SY+ I+ +L + + + M G + ++ T + ++ G++Y+A+
Sbjct: 275 VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEAL 334
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+ + G + + + N ++ LC + A + + M + L NV TY+I+I G+
Sbjct: 335 DLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGF 394
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+K G +V +++ G P+ +T++ +++ L + D A + + M +GC P+T
Sbjct: 395 AKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNT 454
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+N I G + MK + M + C PN+ TY L+ L + K +A +F+E
Sbjct: 455 MTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQE 514
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ R + P+ T + L G A+ ++ KA G Y ++ GK
Sbjct: 515 IEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGK 574
Query: 458 ---CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
L++ M+E + D Y +I G CN +E A+ +++++ +G CP+
Sbjct: 575 VKIAAQLVERVSSMKE--WHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFAT 632
Query: 515 YSKL 518
++ L
Sbjct: 633 WNAL 636
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 126/271 (46%), Gaps = 15/271 (5%)
Query: 139 GNLSGEAMVLFFNWAIKH---PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
G+L G + +N I H PNV +Y +V L + FD +++ M EG
Sbjct: 398 GDLVGASET--WNRMISHGCRPNVV----TYTCMVDVLCKNSMFDQANSLVEKMTLEGCT 451
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P+ T + + G+V A+++L R++ G + + N +L L + A L
Sbjct: 452 PNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGL 511
Query: 256 FNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
F ++ + L N++TYN V+ G+S+ G + E ++ + + G +PDS+T++ +I +
Sbjct: 512 FQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCK 571
Query: 315 AGRIDDA---IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
G++ A +E +MKE PD Y ++I + + +E M + + PN
Sbjct: 572 QGKVKIAAQLVERVSSMKEWH--PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPN 629
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
T+ L+ S + + +++L +G
Sbjct: 630 FATWNALVRCFFDSLGHMGPIHILDDILRKG 660
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 181/367 (49%), Gaps = 7/367 (1%)
Query: 124 NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMC 183
N + ++G V+ + N A+ +F A +V V+ YN ++ R F +
Sbjct: 214 NARMVATILG-VLGKANQEALAVEIF---ARAESSVGDTVQVYNAMMGVYARNGRFSKVK 269
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK--AIQMLGRLEDFGLKFDAESLNVVLW 241
+L M + G PDL + + ++++ +++G + A+Q+L + G++ D + N ++
Sbjct: 270 ELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNTLIS 329
Query: 242 CLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
+ ++ A ++F+ M+ + ++ TYN +IS + + + + E + KE+ ++GF P
Sbjct: 330 ACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKGFFP 389
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
D++T++ L+ R G + ++ + M ++G G D YN +I Y G D+ M+ Y
Sbjct: 390 DAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIY 449
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
+ M S P+ TYT LI L K+ KV +A V EMLD G+ P+ T ++ +
Sbjct: 450 RDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKA 509
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
G A + R+ G K AY ++L F + + L+HEM G+ D +Y
Sbjct: 510 GKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLY 569
Query: 481 EYVIAGL 487
E ++ L
Sbjct: 570 EVMMHAL 576
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 145/349 (41%), Gaps = 10/349 (2%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P+ ++ ++ +A Q A+++ R E + + N ++ + L
Sbjct: 213 PNARMVATILGVLGKANQEALAVEIFARAES-SVGDTVQVYNAMMGVYARNGRFSKVKEL 271
Query: 256 FNSMKGK-VLFNVMTYNIVISGWSKLGQVVEME-----RVLKEIVAEGFSPDSLTFSFLI 309
+ M+ + + +++++N +I+ K G ME ++L E+ G PD +T++ LI
Sbjct: 272 LDLMRERGCVPDLVSFNTLINARMKSGA---MEPNLALQLLNEVRRSGIRPDIITYNTLI 328
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
R +++A+ VF M+ C PD YNA+IS Y + + +K + S
Sbjct: 329 SACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKGFF 388
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P+ TY L+ + ++ EEM+ RG T + + G AM +
Sbjct: 389 PDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQI 448
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
Y+ + G Y +L+ L K ++ EM ++G Y +I
Sbjct: 449 YRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAK 508
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G+ E A R G P RL YS + + L N+++ A L+ ++
Sbjct: 509 AGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEM 557
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/394 (19%), Positives = 153/394 (38%), Gaps = 43/394 (10%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI---RAGQVYKAI 218
D K +N ++ A ++ + + M ++G +P +++++ ++ + I R ++Y I
Sbjct: 808 DRKVWNALIHAYAFSGCYERARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVI 867
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
Q L+D GLK S+ + L Q ++ ++N MK
Sbjct: 868 Q---ELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYNGMK------------------ 906
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
A G+ P + ++ L + R+ D + M+E G PD
Sbjct: 907 ----------------AAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQ 950
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
N+++ Y+ + DF Y+ + + +P+ +TY LI + R+ + + +M
Sbjct: 951 ICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKM 1010
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
G+ P T S + A ++++ R G KL Y L+++ G
Sbjct: 1011 RSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDH 1070
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+L M+ESG ++ GQ E A V++ G L YS +
Sbjct: 1071 RKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSV 1130
Query: 519 SNKLLASNKLESAYNLFRKIKIAR-QNDYARRLW 551
+ L ++ ++K A + D+ R+W
Sbjct: 1131 IDAYLKKGDFKAGIEKLTEMKEAGIEPDH--RIW 1162
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/480 (20%), Positives = 203/480 (42%), Gaps = 38/480 (7%)
Query: 34 LSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSV-KRIDSSRAV 92
++YN L+S + S+L+E + SD+ SH P+++ + SV R +R
Sbjct: 322 ITYNTLISACSRE-SNLEE--AVAVFSDM---ESHRCQPDLWTYNAMISVYGRCARARKA 375
Query: 93 DEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNW 152
+E L E +G F + ++ N + D+ ++V RG
Sbjct: 376 EE-LFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRG------------- 421
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+D +YN I+ G++ D + DM G NPD T ++++DS +A
Sbjct: 422 ------FGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKAS 475
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYN 271
+V +A ++ + D G+K + + ++ + A FN M+ + + + Y+
Sbjct: 476 KVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYS 535
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE- 330
+++ + + ++ + + E++ EGF+PD+ + ++ L R D + M+E
Sbjct: 536 VMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHALVRENMWDVVDRIIRDMEEL 595
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
G P + S + G +D K K S E + + + ++S S + ++
Sbjct: 596 SGMNP-----QVISSVLVKGGCYDHAAKMLKVAISNGYELDHEIFLSIMSSYSSSARYSE 650
Query: 391 ALEVFEEMLDRGIVPSTGTITS--FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A E+ E R P+ + + + LC AA+ Y+ ++G S T Y+ L
Sbjct: 651 ACELLE--FSREHAPNDIQMITEALIIILCKAKKLDAALEEYRSKGELGQFRSCTMYESL 708
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
++ + ++ +M+ +G S +Y+ +++ C + E A ++ + + G
Sbjct: 709 IQECIQNELFDVASQIFSDMRFNGVESSECLYQGMVSVYCRMDLPETAHHLLYHAEKNGI 768
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 110/279 (39%), Gaps = 48/279 (17%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM------DSFIRAGQVYKAIQ 219
Y ++++ L + K + +L +M + G PDL+ + ++ + F G +Y+ IQ
Sbjct: 917 YRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQ 976
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM-TYNIVISGWS 278
D LK D E+ N ++ C+ SL N M+ L + TY +I+ ++
Sbjct: 977 ------DASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFN 1030
Query: 279 KLGQVVEMERVLKEIVAEGF-----------------------------------SPDSL 303
K + E + +E+ + G+ P
Sbjct: 1031 KQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTIS 1090
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T L+ G++G+ ++A V ++ G DT Y++VI Y+ GDF ++ M
Sbjct: 1091 TMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEM 1150
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
EP+ +T I S +A+ + + D G
Sbjct: 1151 KEAGIEPDHRIWTCFIRAATLSEGTNEAIVLLNALQDAG 1189
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 172/345 (49%), Gaps = 4/345 (1%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
PD+ + ++ + AGQ+ A +++ D ++ DA + N ++ LC R A ++
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVA---DMPVEPDAYTYNTLIRGLCGRGRTSNALAV 188
Query: 256 FNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
M + L +V+TY I++ K + ++L E+ +G +PD +T++ ++ G+ +
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ 248
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
GR++DA+E + GC P+T +YN V+ + +++ K + M+ C PN+ T
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT 308
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
+ LIS L + V A+EV E+M G P++ + L C H AM +
Sbjct: 309 FNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMV 368
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
GC + +Y LL L G+ + ++L H++++ G Y VI GL G+ +
Sbjct: 369 SRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTK 428
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
A+ +++E KG P + YS +++ L +++E A F K++
Sbjct: 429 EALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQ 473
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 174/375 (46%), Gaps = 4/375 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV YN +V D +++DM V PD T + ++ G+ A+ +L
Sbjct: 133 DVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVL 189
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ G D + ++L C+R A L + M K +++TYN+V++G +
Sbjct: 190 EDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQE 249
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+V + LK + + G P++++++ +++GL A R +DA ++ + M KGC P+ +
Sbjct: 250 GRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTF 309
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +IS G + M+ + M Y C PN +Y L+ K +K+ A+E E M+
Sbjct: 310 NMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVS 369
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
RG P + + L LC G A+ + + + GC L +Y ++ L+ GK
Sbjct: 370 RGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKE 429
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L+L EM G D Y + +GLC ++E AV + G P+ +Y+ +
Sbjct: 430 ALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILL 489
Query: 521 KLLASNKLESAYNLF 535
L + +A +LF
Sbjct: 490 GLCKRRETHNAIDLF 504
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 182/381 (47%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D +YN +++ L R VL DM + G PD+ T +I++++ + +A+
Sbjct: 162 VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAM 221
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGW 277
++L + D G D + NVVL +CQ V A ++ N ++YNIV+ G
Sbjct: 222 KLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGL 281
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ + E++++E+ +G P+ +TF+ LI L R G ++ A+EV + M + GC P++
Sbjct: 282 FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNS 341
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+YN ++ + + M++ + M S C P++ +Y L++ L ++ +V A+E+ +
Sbjct: 342 LSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQ 401
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ D+G P + + ++ L G A+ + + G + + Y + L +
Sbjct: 402 LKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDR 461
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+ + ++Q+ G +Y ++ GLC + NA+ + + G P+ Y+
Sbjct: 462 IEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTI 521
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L L ++ A LF ++
Sbjct: 522 LVEGLAYEGLVKEARELFAQL 542
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 127/252 (50%), Gaps = 1/252 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+ H +V ++N+++ L RR + VL M + G P+ + + ++ +F + +
Sbjct: 297 MAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKK 356
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM-TYNI 272
++KA++ + + G D S N +L LC+ V A L + +K K V+ +YN
Sbjct: 357 IHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNT 416
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
VI G +K G+ E +L E+ ++G PD +T+S + GL R RI++A+ F +++ G
Sbjct: 417 VIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMG 476
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P YNA++ + + + M S C PN TYT L+ GL V +A
Sbjct: 477 IRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEAR 536
Query: 393 EVFEEMLDRGIV 404
E+F ++ RG+V
Sbjct: 537 ELFAQLCSRGVV 548
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 104/246 (42%), Gaps = 12/246 (4%)
Query: 297 GFSPDSLT----FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
G +P S + LI+ L +GR DA V GPD YNA+++ Y G
Sbjct: 95 GLNPPSPAAVGPCAALIKKLCASGRTADARRVL-----AASGPDVMVYNAMVAGYCGAGQ 149
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
D + M EP+ TY LI GL + ++AL V E+M RG +P T T
Sbjct: 150 LDAARRLVADMPV---EPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTI 206
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
LE C AM + + GC + Y ++L + G+ ++ + G
Sbjct: 207 LLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYG 266
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
+ Y V+ GL + E+A +MEE KG P+ + ++ L + L +E A
Sbjct: 267 CEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAM 326
Query: 533 NLFRKI 538
+ ++
Sbjct: 327 EVLEQM 332
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 178/381 (46%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+ +V +YN++++ +M + G P++ T + ++D++ + G++ +A
Sbjct: 210 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 269
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+L + G++ + S NV++ LC+ + A + M K + +TYN +++G+
Sbjct: 270 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 329
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G + + E+V G SP +T++ LI + +A ++ A+E FD M+ +G P+
Sbjct: 330 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 389
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +I + G +E + M+ P++ TY I G ++ +AL V +E
Sbjct: 390 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 449
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+++G+ P + ++ + C G A M ++ + G Y L++ L +
Sbjct: 450 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRR 509
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
DL EM + G P D Y +I C G L A+ + +E + KGF P + YS
Sbjct: 510 LTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSV 569
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L N L + A L K+
Sbjct: 570 LINGLNKQARTREAKRLLFKL 590
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 182/397 (45%), Gaps = 15/397 (3%)
Query: 150 FNWAIKHPNVAKD------VKSYNVIVKALGRRKFFDFMC--NVLSDMAKEGVNPDLETL 201
+ A+ N+AK V SYN ++ A+ R + + V +M + V+P++ T
Sbjct: 158 IDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTY 217
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+I++ F G++ K + G +E G + + N ++ C+ + A L SM
Sbjct: 218 NILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSS 277
Query: 262 KVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
K + N+++YN++I+G + G + E +L+E+ +GF+PD +T++ L+ G + G
Sbjct: 278 KGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQ 337
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A+ + M G P Y A+I++ + + M+++ M PN TYT LI
Sbjct: 338 ALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLID 397
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
G + + +A + EM + G PS T +F+ C A+ + ++ + G
Sbjct: 398 GFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAP 457
Query: 441 SLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
+ +Y + +SGF + G L + EM E G D Y +I GLC + +L A
Sbjct: 458 DVVSYSTI---ISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 514
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
+ +E L G P Y+ L N L A +L
Sbjct: 515 DLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHL 551
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 181/390 (46%), Gaps = 16/390 (4%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SYNVI+ L R +L +M +G PD T + +++ + + G ++A+ + +
Sbjct: 286 SYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEM 345
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
G+ + ++ +C+ ++ A F+ M+ + L N TY +I G+S+ G +
Sbjct: 346 VRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLL 405
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E R+L E+ GFSP +T++ I G R+++A+ V M EKG PD +Y+ +
Sbjct: 406 NEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTI 465
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS + G+ D + + M P+ TY+ LI GL + R++ +A ++ +EMLD G+
Sbjct: 466 ISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGL 525
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P T T+ + C G + A+ ++ + G Y +L+ L+ +
Sbjct: 526 PPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKR 585
Query: 464 LWHEM-QESGYPSDGEI-----------YEYVIA---GLCNIGQLENAVLVMEESLRKGF 508
L ++ E PSD ++ V+A G C G + A V E + +
Sbjct: 586 LLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNH 645
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P VY+ + + L A+NL++++
Sbjct: 646 KPGEAVYNVIIHGHCRGGNLPKAFNLYKEM 675
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 161/356 (45%), Gaps = 27/356 (7%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+ V +Y ++ ++ + + + M G+ P+ T + ++D F R G + +A
Sbjct: 350 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 409
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
++L + + G + N + C + A + M K L +V++Y+ +ISG+
Sbjct: 410 RILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 469
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G++ ++ +E+V +G SPD++T+S LI+GL R+ +A ++ M + G PD
Sbjct: 470 CRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDE 529
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +I+ Y GD ++ + + M P+ TY+ LI+GL K + +A + +
Sbjct: 530 FTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFK 589
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
++ VPS T + +E S +K ++ + GF
Sbjct: 590 LIYEESVPSDVTYDTLIE-----------------------NCSNIEFKSVVALIKGFCM 626
Query: 458 CGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
G++ + ++ M E + +Y +I G C G L A + +E + GF P
Sbjct: 627 KGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVP 682
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 127/278 (45%), Gaps = 16/278 (5%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
+ V +YN + + + V+ +M ++G+ PD+ + S ++ F R G++ +A Q
Sbjct: 421 SPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQ 480
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWS 278
M + + G+ DA + + ++ LC+ + A L M L + TY +I+ +
Sbjct: 481 MKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYC 540
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV-------------- 324
G + + + E++ +GF PD++T+S LI GL + R +A +
Sbjct: 541 VEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDV 600
Query: 325 -FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+DT+ E + + A+I + G E + ++ M N +P Y +I G
Sbjct: 601 TYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHC 660
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
+ + A +++EM+ G VP T T+ + ++ L G
Sbjct: 661 RGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEG 698
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 103/245 (42%), Gaps = 2/245 (0%)
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI-SVGDFD-E 355
++ S F +++ ID A+ + K G P +YN+V+ + S G
Sbjct: 138 YNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLS 197
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+ Y+ M PN+ TY LI G ++ L F EM G +P+ T + ++
Sbjct: 198 AEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLID 257
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
C G A + K G + +L +Y +++ L G ++ EM G+
Sbjct: 258 AYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTP 317
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
D Y ++ G C G A+++ E +R G PS + Y+ L N + + L A F
Sbjct: 318 DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFF 377
Query: 536 RKIKI 540
+++I
Sbjct: 378 DQMRI 382
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 16/257 (6%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+A DV SY+ I+ R+ D + +M ++GV+PD T S ++ ++ +A
Sbjct: 455 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 514
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+ + D GL D + ++ C + A L + M K L + +TY+++I+G
Sbjct: 515 DLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGL 574
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE---------------GLGRAGRIDDAI 322
+K + E +R+L +++ E P +T+ LIE G G + +A
Sbjct: 575 NKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEAD 634
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
VF++M E+ P YN +I + G+ + YK M P+ T LI L
Sbjct: 635 RVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKAL 694
Query: 383 LKSRKVADALEVFEEML 399
K + EV + L
Sbjct: 695 FKEGMNEEMSEVIGDTL 711
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 168/366 (45%), Gaps = 1/366 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K N+ + ++N ++K L + + NVL++M +G PD T SI+ D + +
Sbjct: 648 MKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDK 707
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
A+ + D GLK +A + +++L LC+ + A + K L N + YN
Sbjct: 708 ADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNT 767
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G+S+ G +V + + +G PD L ++ LI G +++A + + MK KG
Sbjct: 768 MIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKG 827
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P YN +I Y +FD+C K M PN+ +Y LI+ L K K+ +A
Sbjct: 828 VSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 887
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
V +M DRG+ P+ ++ CS G A ++ K G +L+L Y L+ L
Sbjct: 888 IVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGL 947
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
S GK D+ E+ G D Y +I+G G ++ + + EE G P+
Sbjct: 948 SMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTL 1007
Query: 513 LVYSKL 518
Y L
Sbjct: 1008 KTYHLL 1013
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 115/493 (23%), Positives = 210/493 (42%), Gaps = 25/493 (5%)
Query: 32 SNLSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSS-- 89
S +++N LL K D +VL E+ D + +F ++ SN + D++
Sbjct: 656 SLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSND--KADAALG 713
Query: 90 ---RAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVV---------- 136
AVD L + L L +G IE A + +++ +V V
Sbjct: 714 VYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYS 773
Query: 137 NRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNP 196
+G+L G M + A++ + D +YN +++ + ++ M +GV+P
Sbjct: 774 RKGDLVGARMKI---DAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSP 830
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
+ET +I++ + R + K +L +ED G + S ++ CLC+ + A +
Sbjct: 831 SVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 890
Query: 257 NSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
M+ + V NV YN++I G G++ + R +E+ +G + +T++ LI+GL
Sbjct: 891 RDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMN 950
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
G++ +A ++ + KG PD YN++IS Y G+ C+ Y+ M + +P + TY
Sbjct: 951 GKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTY 1010
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
LIS L + ++F EM + P L +G A + K+ +
Sbjct: 1011 HLLIS-LCTKEGIELTKKIFGEM---SLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIE 1066
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
L T Y L+ GK + L EM+ + + Y+ ++ G C +
Sbjct: 1067 KSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMG 1126
Query: 496 AVLVMEESLRKGF 508
A + E KG
Sbjct: 1127 AYVWYREMQEKGL 1139
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 181/415 (43%), Gaps = 3/415 (0%)
Query: 126 DLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNV 185
D S ++ ++N + EA LFF A+++ + S +++ L + K F NV
Sbjct: 482 DFSYLLLSVLLNESKMISEAADLFF--ALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINV 539
Query: 186 LSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
++ + P + + ++ V K +++ R++ + NV++ LC+
Sbjct: 540 FLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCK 599
Query: 246 RLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
+ A LF+ M + L +++TYN +I G+ K G + +V + + A+ P +T
Sbjct: 600 VRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLIT 659
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
F+ L++GL +AG ++DA V MK++G PD ++ + Y S D + Y+
Sbjct: 660 FNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAV 719
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
+ N T + L++ L K ++ A E+ + +G+VP+ + ++ G
Sbjct: 720 DSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLV 779
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A M K G K AY L+R G ++M+ G E Y +I
Sbjct: 780 GARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILI 839
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G + + +++E G P+ + Y L N L +KL A + R ++
Sbjct: 840 GGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDME 894
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 138/321 (42%), Gaps = 32/321 (9%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K V+ V++YN+++ GR+ FD ++L +M G P++ + +++ + +
Sbjct: 823 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSK 882
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
+ +A + +ED G+ + N+++ C + + A M K + N++TYN
Sbjct: 883 LLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNT 942
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G S G++ E E +L EI +G PD T++ LI G AG + I +++ MK G
Sbjct: 943 LIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSG 1002
Query: 333 C-------------------------------GPDTNAYNAVISNYISVGDFDECMKYYK 361
PD YN V+ Y GD D+ K
Sbjct: 1003 IKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQK 1062
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M + + TY LI G LK K+ + + +EM R + P T ++ C
Sbjct: 1063 QMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMK 1122
Query: 422 PPHAAMMMYKKARKVGCKLSL 442
A + Y++ ++ G L +
Sbjct: 1123 DYMGAYVWYREMQEKGLLLDV 1143
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 164/393 (41%), Gaps = 35/393 (8%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
LF +++ P++ D SY ++ L K ++ + EG+ P ++L++++D
Sbjct: 468 LFSAFSLSSPSLKHDF-SYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDH 526
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNV 267
++ Q I + + L+ D + Q AA L + KG LFN
Sbjct: 527 LVKTKQFRVTINVFLNI----LESDFRPSKFMYGKAIQ-----AAVKLSDVGKGLELFNR 577
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
M ++ + SP ++ LI+GL + ++ DA ++FD
Sbjct: 578 MKHDRI-------------------------SPTVFIYNVLIDGLCKVRQMKDAEQLFDE 612
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M + P YN +I Y G+ ++ K + M + N EP++ T+ L+ GL K+
Sbjct: 613 MLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGM 672
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
V DA V EM D+G VP T + + S AA+ +Y+ A G K++ +
Sbjct: 673 VEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSI 732
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
LL L G+ ++ G + +Y +I G G L A + ++ ++G
Sbjct: 733 LLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQG 792
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
P L Y+ L +E+A K+K+
Sbjct: 793 MKPDHLAYNCLIRTFCELGDMENAEQEVNKMKL 825
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 115/239 (48%), Gaps = 3/239 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ L ++L +++++G+ PD+ T + ++ + AG V + I + +
Sbjct: 939 TYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEM 998
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVV 284
+ G+K ++ ++++ LC + + +F M + +++ YN V+ ++ G +
Sbjct: 999 KTSGIKPTLKTYHLLI-SLCTKEGIELTKKIFGEMSLQP--DLLVYNGVLHCYAVHGDMD 1055
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ + K+++ + D T++ LI G + G++ + + D MK + P+ + Y+ ++
Sbjct: 1056 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIV 1115
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ + D+ +Y+ M ++ L+SGL + + +A V EM R +
Sbjct: 1116 KGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMNGRKL 1174
>gi|356499705|ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Glycine max]
Length = 500
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 196/429 (45%), Gaps = 7/429 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLS---GEAMVLFFNWAIKHPNVAKDVKSYNVIVKA 172
++ +L + V LS DV+ +V+ R S + FF + + S + ++
Sbjct: 50 LKQSLKSSGVFLSNDVIDQVLKRVRFSHGNPSQTLEFFRYTGRRKGFYHSSFSLDTMLYI 109
Query: 173 LGRRKFFDFMCNVLSDMA-KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF 231
LGR + F + +L + K+ T+ +V+ + V + ++ + +F
Sbjct: 110 LGRSRMFGQVWELLIEARRKDQTAITARTVMVVLGRIAKVCSVRQTVESFRKFRKLVQEF 169
Query: 232 DAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLK 291
D N +L LCQ + A ++++S+K + N+ T+NI++SGW + + K
Sbjct: 170 DTNCFNALLRTLCQEKSMADARNVYHSLKHRFRPNLQTFNILLSGWKT---PEDADLFFK 226
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
E+ G +PD +T++ L++ + I+ A ++ D M+++ PD Y +I +G
Sbjct: 227 EMKEMGVTPDVVTYNSLMDVYCKGREIEKAYKMLDEMRDQDFSPDVITYTCIIGGLGLIG 286
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
D+ K M Y C P+ Y I ++++ DA + EEM+ +G+ P+ T
Sbjct: 287 QPDKARNVLKEMKEYGCYPDAAAYNAAIRNFCIAKRLGDAHGLVEEMVTKGLSPNATTYN 346
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
F ++ MY++ GC + + L+R K M L W +M E
Sbjct: 347 LFFRVFYWSNDLQSSWNMYQRMMVEGCLPNTQSCMFLIRLFRRHEKVEMALQFWGDMVEK 406
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G+ S + + + LC++G+LE A E + KG PS + + ++ + +N+ E+
Sbjct: 407 GFGSYTLVSDVLFDLLCDMGKLEEAEKCFLEMVEKGQKPSHVSFRRIKVLMELANRHEAL 466
Query: 532 YNLFRKIKI 540
+L +K+ +
Sbjct: 467 QSLMQKMAM 475
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 180/390 (46%), Gaps = 8/390 (2%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
++K + DV +Y ++V L + VL +M G P+L T + ++ RA
Sbjct: 216 SMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRAR 275
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTY 270
+V A+ ++ + G + + ++ LC+ V A ++ M KG ++M Y
Sbjct: 276 RVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGT-PDLMIY 334
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
N++I+G K QV E +L+ V+ G PD +T+S +I GL R+ R+D+A + +K
Sbjct: 335 NMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKS 394
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
+GC PD Y+ +I G DE Y+ M+ C+ ++ TY+ LI GL K+ +V +
Sbjct: 395 RGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDE 454
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A + M+ G PST T S ++ LC A+ + ++ + C S Y +L+
Sbjct: 455 AHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIH 514
Query: 451 RLSGFGKCGMLLDLWHEMQE-----SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+ + + L + + G D Y +I GLC G++ A+ +E +
Sbjct: 515 GMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMID 574
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
G P + YS L L S L +L
Sbjct: 575 NGVIPDHITYSILLEGLKKSKDLHELRHLV 604
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 181/383 (47%), Gaps = 8/383 (2%)
Query: 165 SYNVIVKALGRR-------KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+YN ++ L R F M + S + +P++ T S+++D +A +V +A
Sbjct: 151 TYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQA 210
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG 276
+++L ++ G D + +++ LC+ V AA + M + N++TYN ++ G
Sbjct: 211 VELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHG 270
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ +V + +++++ G +P+ +T+ LI+GL + GR+ DA + M +KG PD
Sbjct: 271 LCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPD 330
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN +I+ DE + + S +P++ TY+ +I GL +S ++ +A +
Sbjct: 331 LMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLL 390
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+ RG P ++ ++ LC G A +Y+ GC + Y L+ L G
Sbjct: 391 YVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAG 450
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ L M G P Y +I GLC++ L+ A+ ++EE R PS + Y+
Sbjct: 451 RVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYN 510
Query: 517 KLSNKLLASNKLESAYNLFRKIK 539
L + + +++SA L + K
Sbjct: 511 ILIHGMCRMERVDSAVVLLEQAK 533
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 180/394 (45%), Gaps = 16/394 (4%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PNV +YN ++ L + D + M +P + T + ++D R G++
Sbjct: 111 EPNVV----TYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLE 166
Query: 216 KAIQMLGRLEDFGLKF--DAESLNVVLWC-----LCQRLHVGAASSLFNSMKGK-VLFNV 267
+A+ + + D D S NV+ + LC+ V A L SMK + +V
Sbjct: 167 RAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDV 226
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TY I++ G K +V VL+E++ G P+ +T++ L+ GL RA R+ DA+ +
Sbjct: 227 ITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRD 286
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M +GC P+ Y +I VG + M P++ Y LI+GL K+ +
Sbjct: 287 MTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQ 346
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA--MMMYKKARKVGCKLSLTAY 445
V +++ + + GI P T +S + LC A +++Y K+R GC + Y
Sbjct: 347 VDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSR--GCPPDVILY 404
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ L GK DL+ M G +D Y +I GLC G+++ A L++ +R
Sbjct: 405 STLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVR 464
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G PS + Y+ L L N L+ A L +++
Sbjct: 465 MGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEME 498
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 171/351 (48%), Gaps = 8/351 (2%)
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
PD+ T + ++ F R G++ +A + + L + ++++ LC+ A
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65
Query: 255 LFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
F +M+G ++ + + Y ++SG K ++ + +L E+ G P+ +T++ LI+GL
Sbjct: 66 CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM---SSYN--- 367
+ D A E+F+ MK C P YN ++ G + M ++ M S++
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185
Query: 368 -CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
C PN+ TY+ LI GL K+ +V+ A+E+ E M RG P T T ++ LC AA
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ ++ GC +L Y LL L + L L +M G + Y +I G
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
LC +G++++A ++ + + KG P ++Y+ L N L +++++ + L R+
Sbjct: 306 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRR 356
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 185/422 (43%), Gaps = 43/422 (10%)
Query: 157 PNVAKDVKSYNVIVKALGR-------RKFFD-----------FMCNVLSD---------- 188
P DV +Y +++ R ++ FD F+C++L D
Sbjct: 3 PICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSID 62
Query: 189 -------MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLW 241
M G+ D + ++ + ++ +A+ +L + D G + + + N ++
Sbjct: 63 ALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLID 122
Query: 242 CLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV------ 294
LC+ A LF MK + +++TYN ++ G + G++ + +E++
Sbjct: 123 GLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHD 182
Query: 295 -AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+ SP+ +T+S LI+GL +A R+ A+E+ ++MK +GC PD Y ++
Sbjct: 183 MDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKV 242
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
+ + M C PN+ TY L+ GL ++R+V+DAL + +M RG P+ T +
Sbjct: 243 AAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTL 302
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
++ LC G A M G L Y +L+ L + + L G
Sbjct: 303 IDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGI 362
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
D Y VI GLC +L+ A ++ +G P ++YS L + L + K++ A++
Sbjct: 363 KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFD 422
Query: 534 LF 535
L+
Sbjct: 423 LY 424
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 9/248 (3%)
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
PD T++ L+ G R G ID A FD M+ K P+ + +I + ++
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
++ M + YT L+SGL K +++ AL + EM D G P+ T S ++ LC
Sbjct: 66 CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW--------HEMQE 470
P A +++ + V C S+ Y LL L GK + L+ H+M +
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
P + Y +I GLC ++ AV ++E +G P + Y+ L + L +K+ +
Sbjct: 186 RCSP-NVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244
Query: 531 AYNLFRKI 538
A+ + R++
Sbjct: 245 AWEVLREM 252
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 7/251 (2%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV +Y+ ++ L R D C +L + G PD+ S ++D +AG+V +A
Sbjct: 362 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAF 421
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+ + G D + + ++ LC+ V A L M + + MTYN +I G
Sbjct: 422 DLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 481
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK-----G 332
L + E +++E+ +P ++T++ LI G+ R R+D A+ + + K + G
Sbjct: 482 CDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGG 541
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
DT AY+++I G E + Y++ M P+ TY+ L+ GL KS+ + +
Sbjct: 542 TALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELR 601
Query: 393 E-VFEEMLDRG 402
V ++M+ G
Sbjct: 602 HLVLDQMVQLG 612
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%)
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
C+P++ TY L+ G + ++ A F+EM + +VP+ + ++ LC A+
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++ + G Y LL L + L + HEM++ G + Y +I GL
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYA 547
C + + A + E PS + Y+ L + L + KLE A LF+++ R +D
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184
Query: 548 RR 549
R
Sbjct: 185 DR 186
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 195/398 (48%), Gaps = 7/398 (1%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
E+ L+F PN+ ++YN+++K R+K FD +L+ M ++G +PD+ +
Sbjct: 133 AESFFLYFETMGLSPNL----QTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYG 188
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS-MKG 261
+++S + G + A+++ + + G+ D N+++ ++ + AS ++ +KG
Sbjct: 189 TLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKG 248
Query: 262 KVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
++ N+ +YN++I+G K G+ E + + D T+S LI GL +G +D
Sbjct: 249 PSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDG 308
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A V+ M E G PD YN +++ Y+ G +EC++ +K M C + +Y LI
Sbjct: 309 ATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIR 367
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
GL ++ KV +A+ ++E + ++ + T + LC G + A+ + ++A L
Sbjct: 368 GLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL 427
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
AY ++ L G+ + + +M + G + + VI G +LE+A+
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ KG P+ + Y+ L N L + + AY L +++
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 181/380 (47%), Gaps = 37/380 (9%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
+D+ +Y+ ++ L D V +MA+ GV+PD+ + +++ ++RAG++ + ++
Sbjct: 287 GQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE 346
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
+ +E G + S N+++ L + V A S++ + K + MTY +++ G
Sbjct: 347 LWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 405
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G + + +L+E D+ +S +I GL R GR+D+ V D M + GC P+ +
Sbjct: 406 KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPH 465
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
NAVI+ ++ ++ ++++ M S C P + TY LI+GL K+ + ++A + +EM
Sbjct: 466 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
L +G P ++ Y LL+ L K
Sbjct: 526 LHKGWKP-----------------------------------NMITYSLLMNGLCQGKKL 550
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
M L+LW + E G+ D +++ +I GLC+ G++E+A+ + E ++ P+ + ++ L
Sbjct: 551 DMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTL 610
Query: 519 SNKLLASNKLESAYNLFRKI 538
E A ++ I
Sbjct: 611 MEGFYKVRDFERASKIWDHI 630
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 171/419 (40%), Gaps = 39/419 (9%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F+ + P + ++ I+K L K + ++ + + + V+ ++
Sbjct: 29 IFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVIKAY 88
Query: 209 IRAGQVYKAIQMLGRLED-FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-N 266
+ +A+ + R+ + FG + S N +L L + A S F + L N
Sbjct: 89 AKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPN 148
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
+ TYNI+I + Q + + +L + +GFSPD ++ LI L + G + DA+++FD
Sbjct: 149 LQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFD 208
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGD---------------------------------- 352
M E+G PD YN +I + GD
Sbjct: 209 EMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKC 268
Query: 353 --FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
FDE + + M ++ TY+ LI GL S + A V++EM + G+ P
Sbjct: 269 GKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVY 328
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+ L G + ++K K GC+ ++ +Y +L+R L K + +W + E
Sbjct: 329 NTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPE 387
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
+D Y ++ GLC G L A+ ++EE+ YS + N L +L+
Sbjct: 388 KDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLD 446
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 174/353 (49%), Gaps = 1/353 (0%)
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
+ ++GV+PD+ S +++F + G+V AIQ+ +E G+ + + N ++ LC+
Sbjct: 303 ETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHG 362
Query: 248 HVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
++ A M K V ++TY+++I+G KL + E VLKE + +GF+P+ + ++
Sbjct: 363 NLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYN 422
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
LI+G + G + DA+ + M KG P++ N++I + +G ++ + M S
Sbjct: 423 TLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSR 482
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
N +T +I L + + AL EML R + P+ G +T+ + LC G A
Sbjct: 483 GFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDA 542
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ ++ + + G +L L+ L G + L +M E G+ D Y +I+G
Sbjct: 543 VELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISG 602
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
C G++E + E +++G P Y+ L + + KL+ A NL+ + K
Sbjct: 603 CCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECK 655
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 174/369 (47%), Gaps = 3/369 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++ I+ L F+ L +M + P+ L+ ++ + G+ A+++ RL
Sbjct: 490 AFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRL 549
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQ 282
+ G + + N ++ LC+ ++ A L M +G VL + +TYN +ISG K G+
Sbjct: 550 LEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVL-DKITYNTLISGCCKEGK 608
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V E ++ E+V +G PD+ T++ LI G+ R G++D+A+ +++ K + P+ Y
Sbjct: 609 VEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGV 668
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I Y +E K + + + N E N Y LI ++ +A ++ ++M +G
Sbjct: 669 MIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG 728
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
I P+T T +S + +C+ G A + + RK G ++ Y L+ G+ ++
Sbjct: 729 IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVV 788
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
++ EM + Y +I G G ++ A ++ E + KG P + Y+ L+N
Sbjct: 789 NVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGF 848
Query: 523 LASNKLESA 531
K+E
Sbjct: 849 CKEGKIEEG 857
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 175/409 (42%), Gaps = 36/409 (8%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN ++ + + DM +G+NP+ TL+ ++ F + GQ+ +A +L +
Sbjct: 421 YNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEML 480
Query: 226 DFGLKFDAESLNVVLWCLC------------------------------------QRLHV 249
G + + ++ LC + H
Sbjct: 481 SRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHS 540
Query: 250 GAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A F ++ N++T N +I G K G + E R+LK+++ GF D +T++ LI
Sbjct: 541 DAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLI 600
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
G + G++++ ++ M ++G PDT YN +I +G DE + + S +
Sbjct: 601 SGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLV 660
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
PN+ TY +I G K+ K+ + ++F E+L + + ++ + + C G A +
Sbjct: 661 PNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL 720
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ R G + Y L+ + G+ L EM++ G + Y +I G C
Sbjct: 721 HDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCK 780
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+GQ++ V V++E P+++ Y+ + + S +++A L ++
Sbjct: 781 LGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM 829
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/472 (22%), Positives = 200/472 (42%), Gaps = 73/472 (15%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
+G +A+ LFF+ ++ V+ +V +YN ++ L + D M K+GVN
Sbjct: 325 KGGKVEDAIQLFFD--MEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNAT 382
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
L T S++++ ++ + +A +L + G + N ++ C+ ++G A +
Sbjct: 383 LITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRG 442
Query: 258 SMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS----------------- 299
M K + N +T N +I G+ K+GQ+ + E +L+E+++ GFS
Sbjct: 443 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNS 502
Query: 300 ------------------PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
P+ + L+ GL + G+ DA+E++ + EKG G + N
Sbjct: 503 RFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTN 562
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A+I G+ E ++ K M + TY LISG K KV + ++ EM+ +
Sbjct: 563 ALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ 622
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMM----------------------YKKARKV--- 436
GI P T T + +C G A+ + Y KA K+
Sbjct: 623 GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEG 682
Query: 437 ----------GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+L+ Y L+R G L +M+ G P Y +I G
Sbjct: 683 EKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHG 742
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+CNIG++E+A +++E ++G P+ + Y+ L +++ N+ +++
Sbjct: 743 MCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEM 794
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 141/317 (44%), Gaps = 1/317 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
+ ++G +L T + ++ + G + +A+++L ++ + G D + N ++ C+
Sbjct: 549 LLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGK 608
Query: 249 VGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
V L M K + + TYN++I G ++G++ E + E + P+ T+
Sbjct: 609 VEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGV 668
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
+I+G +A +I++ ++F + + ++ YN +I Y G+ E K + M S
Sbjct: 669 MIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG 728
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
P TY+ LI G+ ++ DA + +EM G++P+ T+ + C G +
Sbjct: 729 IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVV 788
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+ ++ + Y +++ S G L HEM G D Y + G
Sbjct: 789 NVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGF 848
Query: 488 CNIGQLENAVLVMEESL 504
C G++E L+ E+ +
Sbjct: 849 CKEGKIEEGKLLAEDGV 865
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 160/381 (41%), Gaps = 70/381 (18%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
+A +GV P ++T + ++ S ++A ++ K+ W
Sbjct: 270 LANKGVFPTVKTCTFLLSSLVKANELEKS----------------------YW------- 300
Query: 249 VGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
+F +M+ V +V ++ I+ + K G+V + ++ ++ G SP+ +T++ L
Sbjct: 301 ------VFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNL 354
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I GL + G +D+A + M + G Y+ +I+ + + F+E K
Sbjct: 355 IHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGF 414
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
PN Y LI G K + DAL + +M+ +GI P++ T+ S ++ C G A
Sbjct: 415 TPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAEC 474
Query: 429 MYKKARKVGCKLSLTAY---------------------KLLLRR--------------LS 453
+ ++ G ++ A+ ++LLR L
Sbjct: 475 ILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLC 534
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
GK ++LW + E G+ ++ +I GLC G ++ AV ++++ L +GF ++
Sbjct: 535 KEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKI 594
Query: 514 VYSKLSNKLLASNKLESAYNL 534
Y+ L + K+E + L
Sbjct: 595 TYNTLISGCCKEGKVEEGFKL 615
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 158/354 (44%), Gaps = 15/354 (4%)
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
L + ++M S I +G V A +L RL D L VL+ + H+ AS++ +
Sbjct: 179 LRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLP--------VLFGDPKNRHIEIASAMAD 230
Query: 258 -SMKGKVLFNVMTYNIVISGWSKLGQVVEMER---VLKEIVAEGFSPDSLTFSFLIEGLG 313
+ G+ V +++I + + V V + + +G P T +FL+ L
Sbjct: 231 LNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLV 290
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+A ++ + VF+TM++ G PD ++ I+ + G ++ ++ + M PN+
Sbjct: 291 KANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVV 349
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
TY LI GL K + +A E+M+ G+ + T + + L + A + K+
Sbjct: 350 TYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKET 409
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
+ G + Y L+ G G L + +M G + +I G C IGQ+
Sbjct: 410 LEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQM 469
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK--IKIARQND 545
E A ++EE L +GF + ++ + + L +++ ESA R+ ++ R ND
Sbjct: 470 EQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPND 523
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 178/381 (46%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+ +V +YN++++ +M + G P++ T + ++D++ + G++ +A
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+L + G++ + S NV++ LC+ + A + M K + +TYN +++G+
Sbjct: 66 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G + + E+V G SP +T++ LI + +A ++ A+E FD M+ +G P+
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +I + G +E + M+ P++ TY I G ++ +AL V +E
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 245
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+++G+ P + ++ + C G A M ++ + G Y L++ L +
Sbjct: 246 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRR 305
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
DL EM + G P D Y +I C G L A+ + +E + KGF P + YS
Sbjct: 306 LTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSV 365
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L N L + A L K+
Sbjct: 366 LINGLNKQARTREAKRLLFKL 386
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 181/390 (46%), Gaps = 16/390 (4%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SYNVI+ L R +L +M +G PD T + +++ + + G ++A+ + +
Sbjct: 82 SYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEM 141
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
G+ + ++ +C+ ++ A F+ M+ + L N TY +I G+S+ G +
Sbjct: 142 VRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLL 201
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E R+L E+ GFSP +T++ I G R+++A+ V M EKG PD +Y+ +
Sbjct: 202 NEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTI 261
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS + G+ D + + M P+ TY+ LI GL + R++ +A ++ +EMLD G+
Sbjct: 262 ISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGL 321
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P T T+ + C G + A+ ++ + G Y +L+ L+ +
Sbjct: 322 PPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKR 381
Query: 464 LWHEM-QESGYPSDGEI-----------YEYVIA---GLCNIGQLENAVLVMEESLRKGF 508
L ++ E PSD ++ V+A G C G + A V E + +
Sbjct: 382 LLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNH 441
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P VY+ + + L A+NL++++
Sbjct: 442 KPGEAVYNVIIHGHCRGGNLPKAFNLYKEM 471
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 162/350 (46%), Gaps = 7/350 (2%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + V+P++ T +I++ F G++ K + G +E G + + N ++ C+
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 249 VGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ A L SM K + N+++YN++I+G + G + E +L+E+ +GF+PD +T++
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
L+ G + G A+ + M G P Y A+I++ + + M+++ M
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
PN TYT LI G + + +A + EM + G PS T +F+ C A+
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVI 484
+ ++ + G + +Y + +SGF + G L + EM E G D Y +I
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTI---ISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 297
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
GLC + +L A + +E L G P Y+ L N L A +L
Sbjct: 298 QGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHL 347
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 164/369 (44%), Gaps = 27/369 (7%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+ V +Y ++ ++ + + + M G+ P+ T + ++D F R G + +A
Sbjct: 146 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 205
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
++L + + G + N + C + A + M K L +V++Y+ +ISG+
Sbjct: 206 RILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 265
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G++ ++ +E+V +G SPD++T+S LI+GL R+ +A ++ M + G PD
Sbjct: 266 CRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDE 325
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +I+ Y GD ++ + + M P+ TY+ LI+GL K + +A + +
Sbjct: 326 FTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFK 385
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
++ VPS T + +E S +K ++ + GF
Sbjct: 386 LIYEESVPSDVTYDTLIE-----------------------NCSNIEFKSVVALIKGFCM 422
Query: 458 CGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G++ + ++ M E + +Y +I G C G L A + +E + GF P +
Sbjct: 423 KGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVT 482
Query: 515 YSKLSNKLL 523
L L
Sbjct: 483 VITLIKALF 491
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 127/278 (45%), Gaps = 16/278 (5%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
+ V +YN + + + V+ +M ++G+ PD+ + S ++ F R G++ +A Q
Sbjct: 217 SPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQ 276
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWS 278
M + + G+ DA + + ++ LC+ + A L M L + TY +I+ +
Sbjct: 277 MKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYC 336
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV-------------- 324
G + + + E++ +GF PD++T+S LI GL + R +A +
Sbjct: 337 VEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDV 396
Query: 325 -FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+DT+ E + + A+I + G E + ++ M N +P Y +I G
Sbjct: 397 TYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHC 456
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
+ + A +++EM+ G VP T T+ + ++ L G
Sbjct: 457 RGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEG 494
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 16/257 (6%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+A DV SY+ I+ R+ D + +M ++GV+PD T S ++ ++ +A
Sbjct: 251 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 310
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+ + D GL D + ++ C + A L + M K L + +TY+++I+G
Sbjct: 311 DLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGL 370
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE---------------GLGRAGRIDDAI 322
+K + E +R+L +++ E P +T+ LIE G G + +A
Sbjct: 371 NKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEAD 430
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
VF++M E+ P YN +I + G+ + YK M P+ T LI L
Sbjct: 431 RVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKAL 490
Query: 383 LKSRKVADALEVFEEML 399
K + EV + L
Sbjct: 491 FKEGMNEEMSEVIGDTL 507
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%)
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
PN+ TY LI G ++ L F EM G +P+ T + ++ C G A +
Sbjct: 8 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
K G + +L +Y +++ L G ++ EM G+ D Y ++ G C
Sbjct: 68 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
G A+++ E +R G PS + Y+ L N + + L A F +++I
Sbjct: 128 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRI 178
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 179/373 (47%), Gaps = 8/373 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI-QM 220
DV +Y ++ AL R + F M + G P L T ++++D + + G+ ++ I ++
Sbjct: 116 DVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILEL 175
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSK 279
++ G++ D + N + A+ LF MK + +TYN ++ + K
Sbjct: 176 FEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGK 235
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G E VLKE+ + G P+ +T++ L+ GRAG + A E+ D+M KG PD
Sbjct: 236 AGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFT 295
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y +++S Y G ++ M+ Y M + NC PN T+ LI K++ ++ + +FE+M
Sbjct: 296 YTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQ 355
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
G+ P T S L G + +++ +K G + + +L+ +G+CG
Sbjct: 356 ACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIE---AYGRCG 412
Query: 460 ---MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
L ++ M ++G D + ++A L G+ E+A L+++E R + P+ + Y+
Sbjct: 413 SSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYA 472
Query: 517 KLSNKLLASNKLE 529
+ + +LE
Sbjct: 473 SMLHAYANGGELE 485
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 163/367 (44%), Gaps = 12/367 (3%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
F +++K G + +L NV +D+ GK +G S E ++ F +K + D +
Sbjct: 139 FFEQMKEAGP-QPSLVTYNV--IIDLYGK---KGR-SWENILELFE-EMKAQGIQPDEYT 190
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN + A + + + M PD T + ++D + +AG +A +L +E
Sbjct: 191 YNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEME 250
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
G + + N +L + AA+ + +SM K + +V TY ++S +S+ G+V
Sbjct: 251 SAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVE 310
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ + ++ +P+S TF+ LI G+ + + +F+ M+ G PD +N+++
Sbjct: 311 QAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLL 370
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ G + E +K ++GM EP+ T+ LI + AL +++ ML G
Sbjct: 371 GAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCT 430
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG---KCGML 461
P T + L L G A ++ + + K + AY +L + G K +
Sbjct: 431 PDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEM 490
Query: 462 LDLWHEM 468
+D H +
Sbjct: 491 VDTLHTI 497
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 140/350 (40%), Gaps = 38/350 (10%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
E MV+F + ++ V D+ ++N ++ A G+ + + V M K G PD T +I
Sbjct: 346 EMMVIFED--MQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNI 403
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR----------------- 246
+++++ R G +A+ + + G D + N +L L +
Sbjct: 404 LIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSS 463
Query: 247 -----------LHVGAASSLFNSMKGKV--------LFNVMTYNIVISGWSKLGQVVEME 287
LH A +K V F + + +SK V E E
Sbjct: 464 YKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAE 523
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
+ G+ D+ TF+ +I G+ G +D A + F ++ G PD YN ++ Y
Sbjct: 524 DAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMY 583
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
G + +C + + P++ +Y +I K +++ A +F EM+ GI P +
Sbjct: 584 GREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDS 643
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
T +F+ + G A+ + K K GCK Y+ L+ GK
Sbjct: 644 FTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGK 693
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 113/270 (41%), Gaps = 3/270 (1%)
Query: 252 ASSLFNSMKGKVLF--NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A +FN M+ V F + +T +++ + Q+ + R+ K + EG+ D ++ LI
Sbjct: 65 ALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYAYTSLI 124
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG-DFDECMKYYKGMSSYNC 368
L R + +A+ F+ MKE G P YN +I Y G ++ ++ ++ M +
Sbjct: 125 SALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGI 184
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
+P+ TY I+ +A E+F +M P T + L+ G + A
Sbjct: 185 QPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAAN 244
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ K+ GC ++ Y LL G C ++ M G D Y +++
Sbjct: 245 VLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYS 304
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
G++E A+ + + P+ ++ L
Sbjct: 305 RAGKVEQAMEIYNQMRTSNCTPNSFTFNAL 334
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 102/246 (41%), Gaps = 36/246 (14%)
Query: 135 VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
V ++ +L EA F A++H D ++N ++ G++ D + + + G+
Sbjct: 512 VYSKCSLVDEAEDAFL--AMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGL 569
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
PD+ T + +M + R G K C+ ++
Sbjct: 570 EPDVVTYNCLMGMYGREGMYRK---------------------------CE-------AT 595
Query: 255 LFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
L M ++++YN VI +SK GQ+ R+ E+V+ G PDS T++ +
Sbjct: 596 LRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVN 655
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G +A+ V M + GC PD Y ++ Y +G F+E + K + S + +
Sbjct: 656 GGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSSDPNFSKAA 715
Query: 375 YTRLIS 380
Y R+ +
Sbjct: 716 YRRIAA 721
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 3/246 (1%)
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
F PD +T + ++ LGR ++ +F +++E+G D AY ++IS F E +
Sbjct: 78 FRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEAL 137
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGL-LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
+++ M +P++ TY +I K R + LE+FEEM +GI P T + +
Sbjct: 138 GFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITA 197
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
S A ++ + + C Y LL G ++ EM+ +G +
Sbjct: 198 CASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPN 257
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESL-RKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
Y +++ G L NA M++S+ KG P Y+ L + + K+E A ++
Sbjct: 258 IVTYNELLSAFGRAG-LCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIY 316
Query: 536 RKIKIA 541
+++ +
Sbjct: 317 NQMRTS 322
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 197/436 (45%), Gaps = 45/436 (10%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K + +V +YN+++KAL + D + +M+ +G PD T + ++ S +AG+
Sbjct: 170 MKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGK 229
Query: 214 ----------------VYKA--------------IQMLGRLEDFGLKFDAESLNVVLWCL 243
VY A I++LG + D G+ + S + ++ L
Sbjct: 230 IDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289
Query: 244 CQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
C +V A +LF M +G N+ T+ +I G G++ E + K ++ +G P+
Sbjct: 290 CVSGNVELAFALFAQMFLRG-CDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPN 348
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+ ++ LI GL G +++A++V D M+ GC P+ Y+ +I + GD + +
Sbjct: 349 VVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWN 408
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M S+ C PN+ TYT ++ L K+ A + E+M G P+T T +F++ LC G
Sbjct: 409 RMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNG 468
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
AM + ++ + GC ++T Y LL L K L+ E++ + Y
Sbjct: 469 RVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYN 528
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
V+ G G + A+ + ++L +G P + Y N + AY K+KIA
Sbjct: 529 TVLYGFSRAGMMGEALQLFGKALVRGTAPDSITY----------NTMIHAYCKQGKVKIA 578
Query: 542 RQNDYARRLWRSKGWH 557
Q R+ K WH
Sbjct: 579 AQ--LVERVSSMKEWH 592
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 210/480 (43%), Gaps = 76/480 (15%)
Query: 130 DVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS-YNVIVKALGRRKFFDFMCNVLSD 188
DV+ ++ NLS VL F AI + N + S Y V+++ LGR D + +L
Sbjct: 43 DVLKRLKTDRNLSS---VLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQ 99
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M +G+N + +++ + R G +A++M R+ +FG K N +L L
Sbjct: 100 MKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENK 159
Query: 249 VGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ L+ +MK L NV TYNI++ K +V ++ E+ +G PD++T++
Sbjct: 160 FQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTT 219
Query: 308 LIEGLGRAGRIDD------------------------------AIEVFDTMKEKGCGPDT 337
++ L +AG+IDD AI++ M + G P+
Sbjct: 220 MVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNV 279
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+Y+ +I++ G+ + + M C+ N+ T+T LI G K+ +AL++++
Sbjct: 280 VSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKL 339
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ G P+ + + LCS G A+ + + ++ GC ++T Y +L + GF K
Sbjct: 340 MIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSIL---IDGFAK 396
Query: 458 CGMLL---DLWHEMQESGYPSDGEIYEYV------------------------------- 483
G L+ + W+ M G + Y +
Sbjct: 397 SGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTIT 456
Query: 484 ----IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I GLC G++E A+ ++E G P+ Y++L + L NK E A+ LF++I+
Sbjct: 457 FNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIE 516
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 167/364 (45%), Gaps = 6/364 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V +V SY+ I+ +L + + + M G + ++ T + ++ G++Y+A+
Sbjct: 275 VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEAL 334
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+ + G + + + N ++ LC + A + + M + L NV TY+I+I G+
Sbjct: 335 DLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGF 394
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+K G +V +++ G P+ +T++ +++ L + D A + + M +GC P+T
Sbjct: 395 AKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNT 454
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+N I G + MK + M + C PN+ TY L+ L + K +A +F+E
Sbjct: 455 ITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQE 514
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ R + P+ T + L G A+ ++ KA G Y ++ GK
Sbjct: 515 IEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGK 574
Query: 458 ---CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
L++ M+E + D Y +I G CN +E A+ +++++ +G CP+
Sbjct: 575 VKIAAQLVERVSSMKE--WHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFAT 632
Query: 515 YSKL 518
++ L
Sbjct: 633 WNAL 636
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 126/271 (46%), Gaps = 15/271 (5%)
Query: 139 GNLSGEAMVLFFNWAIKH---PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
G+L G + +N I H PNV +Y +V L + FD +++ M EG
Sbjct: 398 GDLVGASET--WNRMISHGCRPNVV----TYTCMVDVLCKNSMFDQANSLVEKMTLEGCT 451
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P+ T + + G+V A+++L R++ G + + N +L L + A L
Sbjct: 452 PNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGL 511
Query: 256 FNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
F ++ + L N++TYN V+ G+S+ G + E ++ + + G +PDS+T++ +I +
Sbjct: 512 FQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCK 571
Query: 315 AGRIDDA---IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
G++ A +E +MKE PD Y ++I + + +E M + + PN
Sbjct: 572 QGKVKIAAQLVERVSSMKEWH--PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPN 629
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
T+ L+ S + + +++L +G
Sbjct: 630 FATWNALVRCFFDSLGHMGPIHILDDILRKG 660
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 195/403 (48%), Gaps = 3/403 (0%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
RGN SG+A LF N A + V ++ ++ L F+ V + ++G D
Sbjct: 42 RGNKSGDAFDLF-NQAESFA-CSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLD 99
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
++++ F R+GQ+ A++M ++ G + D + ++ L + V A S F+
Sbjct: 100 RFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFD 159
Query: 258 SMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
+M + L N+ TYN+++ + K+GQ+ + E+ GF P +T++ L++ L AG
Sbjct: 160 AMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAG 219
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
R+ A ++F M GC PD+ Y+ +++ G +E K ++ M ++ Y
Sbjct: 220 RVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYN 279
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
L++ L K+ + ++ +EM +G P + + ++ L P AA ++ + +
Sbjct: 280 SLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVES 339
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
GCK L +Y +L+ + FG + EM E+G+ + + Y +I L GQ++ A
Sbjct: 340 GCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEA 399
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
V+EE G P + Y++L + L + + A LF+++K
Sbjct: 400 FAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMK 442
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 182/422 (43%), Gaps = 57/422 (13%)
Query: 145 AMVLFFNWAIKHPNVAKDVKSYNVIVKALGR-------RKFFDFMCNVLSDMAKEGVNPD 197
AM +F IK D +Y +V ALG+ R FFD M + G+ P+
Sbjct: 119 AMEMFREMKIKGSE--PDEYTYGFLVNALGKAGRVQEARSFFDAML-------ERGLTPN 169
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ T +++MD+F + GQ+ A+ + ++ G + + N++L LC VGAA LF+
Sbjct: 170 IPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFH 229
Query: 258 SMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIV---------------------- 294
M G + TY+ +++G K G+V E +V +E+V
Sbjct: 230 KMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAG 289
Query: 295 -------------AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+GF PD+ +F+ +++ LG+A + D A EVF M E GC PD +YN
Sbjct: 290 NMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYN 349
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I +Y GD + + + M P TY LI L +V +A V EEM
Sbjct: 350 ILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETA 409
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G P T ++ L G A ++++ + G + +Y + + L+ +
Sbjct: 410 GCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEA 469
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP--SRLVYSKLS 519
L L+ +M+ G P D +Y +I G E + ES F P SRL K
Sbjct: 470 LVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHES---QFMPVESRLTSQKAK 526
Query: 520 NK 521
K
Sbjct: 527 TK 528
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 3/267 (1%)
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+V++ W G + +E +LKE+VAEG T LI GR + DA ++F+ +
Sbjct: 3 VVLASW---GILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESF 59
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
C P +A+ +I ++ G+F+ YK + C+ + Y LI +S ++ A
Sbjct: 60 ACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSA 119
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+E+F EM +G P T + L G A + + G ++ Y LL+
Sbjct: 120 MEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDA 179
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
G+ M L L+ EM+ G+ Y ++ LC+ G++ A + + G P
Sbjct: 180 FRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPD 239
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
YS L N L S ++E A+ +FR++
Sbjct: 240 SYTYSTLVNGLGKSGRVEEAHKVFREM 266
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 2/170 (1%)
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
PN T +LI+ + K DA ++F + P+ T ++ L + G A ++
Sbjct: 30 PN--TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELV 87
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
YKK + GC+L AY +L+R G+ ++++ EM+ G D Y +++ L
Sbjct: 88 YKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGK 147
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G+++ A + L +G P+ Y+ L + +L+ A LF ++K
Sbjct: 148 AGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMK 197
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 187/389 (48%), Gaps = 8/389 (2%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
R N+ G ++++ N ++ V +V +YN++V+AL + +L +MA++G PD
Sbjct: 140 RENMVGAVVLVYDN--MRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPD 197
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
T + ++ + ++ +A ++L + A S N ++ LC+ + S+ +
Sbjct: 198 DVTYATIVSVLCKLDRLDEATEVLAAMPPV-----AASYNAIVLALCREFRMQEVFSVVS 252
Query: 258 SMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
M G+ L NV+TY ++ + K G++ +L +V G +P+ +TF+ L+ GL G
Sbjct: 253 DMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDG 312
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
R+ DA++++ M +G P T +YN +I SVGD M + C PN+ TY+
Sbjct: 313 RVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYS 372
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
LI G K+ + A+ ++ +M G P+ T+ ++ C + A + K
Sbjct: 373 TLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLE 432
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
C + + L+R L + G L ++HEM+ G +G Y +I GL G +A
Sbjct: 433 NCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDA 492
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
+ ++ E G S + Y+ + + L +
Sbjct: 493 LHMVTEMQSHGIELSLVTYNTVVSGLCQT 521
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 172/417 (41%), Gaps = 34/417 (8%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
P +++ V+ L D + L +M GV L + +F RAG +
Sbjct: 49 PGTGDAARAHEAAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDR 108
Query: 217 AIQMLGR-LEDFGLKFDAES--LNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
A++ R + D G E N ++ L + VGA ++++M K V NV TYN+
Sbjct: 109 ALKTFYRAVHDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNL 168
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE-- 330
++ + +V ++L E+ +G PD +T++ ++ L + R+D+A EV M
Sbjct: 169 LVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVA 228
Query: 331 ----------------------------KGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+G P+ Y ++ + G+
Sbjct: 229 ASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILAR 288
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M C PN+ T+T L+ GL +V DAL+++ M+ G PST + + LCS G
Sbjct: 289 MVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGD 348
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A + + GC ++ Y L+ S G G + +W++M SG + +Y
Sbjct: 349 LKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTN 408
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ C A ++++ L + P+ + ++ L L ++ A +F +++
Sbjct: 409 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMR 465
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 157/367 (42%), Gaps = 74/367 (20%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
P VA SYN IV AL R + +V+SDM G+ P++ T + ++D+F +AG++
Sbjct: 225 PPVAA---SYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRM 281
Query: 217 AIQMLGR-------------------LEDFGLKFDA----------------ESLNVVLW 241
A +L R L D G DA S N+++
Sbjct: 282 ACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIR 341
Query: 242 CLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVV-------EMER----- 288
LC + ASS+ NSM+ F NV TY+ +I G+SK G + +M R
Sbjct: 342 GLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKP 401
Query: 289 -----------------------VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
++ +++ E P+++TF+ LI L R+ A+ VF
Sbjct: 402 NVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVF 461
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
M+ GC P+ YN +I G+ + + M S+ E ++ TY ++SGL ++
Sbjct: 462 HEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQT 521
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
R +A+ +M+ +GI P+ T ++ + C G A M V C ++ Y
Sbjct: 522 RMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVY 581
Query: 446 KLLLRRL 452
+L+ L
Sbjct: 582 TILMAEL 588
>gi|224107983|ref|XP_002314677.1| predicted protein [Populus trichocarpa]
gi|222863717|gb|EEF00848.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 200/430 (46%)
Query: 100 ERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNV 159
++++G+ + + + AL ++ + D+V +++ R + + F WA
Sbjct: 36 DKVKGILKRHFPSEDAVVKALDESGINATNDLVSQLLERFSNQWITALGVFIWAKNQTGY 95
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
+ Y+++V LG+ K F M V+++M + T+SIV+ +G I
Sbjct: 96 VHTPRLYDLVVDILGKCKKFGIMWKVVNEMNELNGQVSFSTMSIVVRRLASSGMYKDVID 155
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSK 279
+L LE + +K D +LN+V+ L ++ A S+F K + + ++NI+I G+ +
Sbjct: 156 VLRGLEKYRVKKDTVALNMVMHALAKQGGAKDAYSVFLEFKDSITLDSHSFNILIHGYCE 215
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
+ + + ++E+ GF PD+ +++ I+ + + + + M EKGC PD A
Sbjct: 216 ARMLDDARKTMEEMEKHGFRPDASSYTCFIKAYCKQKDFRNVEVILNEMGEKGCEPDVIA 275
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y+ I +E ++ Y+ M+ +C+P+ ++ LI L +S ++ DA VFE+M
Sbjct: 276 YSIYIRALGKARKINEALEVYEKMNKNSCKPDAKFFSTLIYVLGRSGRLNDAWYVFEDME 335
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
+ G+ T + + C+ ++A+ + ++ CK L Y+ LL+
Sbjct: 336 NHGVSRDLWTYNAMIYHACANRQGNSALKLLERMEVNSCKPDLETYQPLLKMCCKMKDMK 395
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+L L M + D Y +I L G+LE+A ++++ G P Y L
Sbjct: 396 VLKFLLSHMFNNNVRIDLSTYALLIRELAESGKLEHACFFFQDAVLNGIVPKDRTYEILL 455
Query: 520 NKLLASNKLE 529
+L +N +E
Sbjct: 456 KELGQNNMVE 465
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 114/273 (41%), Gaps = 5/273 (1%)
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
Y++V+ K + M +V+ E+ T S ++ L +G D I+V ++
Sbjct: 102 YDLVVDILGKCKKFGIMWKVVNEMNELNGQVSFSTMSIVVRRLASSGMYKDVIDVLRGLE 161
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT--RLISGLLKSRK 387
+ DT A N V+ G + Y + +D+++ LI G ++R
Sbjct: 162 KYRVKKDTVALNMVMHALAKQGGAKDA---YSVFLEFKDSITLDSHSFNILIHGYCEARM 218
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ DA + EEM G P + T F++ C ++ + + GC+ + AY +
Sbjct: 219 LDDARKTMEEMEKHGFRPDASSYTCFIKAYCKQKDFRNVEVILNEMGEKGCEPDVIAYSI 278
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
+R L K L+++ +M ++ D + + +I L G+L +A V E+ G
Sbjct: 279 YIRALGKARKINEALEVYEKMNKNSCKPDAKFFSTLIYVLGRSGRLNDAWYVFEDMENHG 338
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
Y+ + A+ + SA L ++++
Sbjct: 339 VSRDLWTYNAMIYHACANRQGNSALKLLERMEV 371
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 182/379 (48%), Gaps = 1/379 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V + +SYN+++ +L R ++L M +G PD+ + + ++D + G++ K +
Sbjct: 106 VCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVV 165
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
Q++ ++ GLK + + + ++ LC+ V + M + +F + + Y +I G+
Sbjct: 166 QLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGF 225
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
KLG ++ E+ A PDS+ FS LI GL +G++ +A ++F+ M +KG PD
Sbjct: 226 CKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDE 285
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y A+I Y +G+ + + M PN+ TYT L GL KS ++ A E+ E
Sbjct: 286 VTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHE 345
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M +G+ + T + + LC G A+ + ++ ++ G Y L+ G+
Sbjct: 346 MCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGE 405
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+L EM + G + ++ GLC G+LE+ +++ L KG P+ Y+
Sbjct: 406 MVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNS 465
Query: 518 LSNKLLASNKLESAYNLFR 536
+ + N + + ++R
Sbjct: 466 IMKQYCIRNNMRISTEIYR 484
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 194/410 (47%), Gaps = 4/410 (0%)
Query: 129 LDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALG-RRKFFDFMCNVLS 187
DV +V+ L EA FF+ + + VA S N+ + L +R + V S
Sbjct: 42 FDVFFQVLVEAGLLNEARK-FFDKLLNY-GVALSAGSCNLYLTCLSSKRDMLGMVLKVFS 99
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
+ + GV + E+ +I+M+S R G++ +A +L R+E G D S ++ C
Sbjct: 100 EFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVG 159
Query: 248 HVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
+ L M+ K L N+ TY+ +I K G+VVE E+VL+E++ G PD + ++
Sbjct: 160 ELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYT 219
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
LI+G + G A ++F M+ + PD+ A++A+I G E K + M
Sbjct: 220 TLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKK 279
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
EP+ TYT LI G K ++ A + +M+ G+ P+ T T+ + LC G A
Sbjct: 280 GFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTA 339
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ + + G +L+++ Y ++ L G + L EM+E+G D Y ++
Sbjct: 340 NELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDA 399
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
G++ A ++ E L +G P+ + ++ L N L S KLE L +
Sbjct: 400 YYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLK 449
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 173/364 (47%), Gaps = 7/364 (1%)
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
RKFFD + N ++ N L LS D G V K +L G+ ++ ES
Sbjct: 59 RKFFDKLLNYGVALSAGSCNLYLTCLSSKRDML---GMVLKVFSEFPQL---GVCWNTES 112
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
N+++ L + + A L M+ K + +V++Y +I G+ +G++ ++ +++KE+
Sbjct: 113 YNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQ 172
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
+G P+ T+S +I L ++G++ + +V M ++G PD Y +I + +G+
Sbjct: 173 LKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQ 232
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
K + M + P+ ++ LI GL S KV +A ++F EM+ +G P T T+ +
Sbjct: 233 AAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALI 292
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
+ C G A ++ + ++G ++ Y L L G+ +L HEM G
Sbjct: 293 DGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQ 352
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
+ Y ++ GLC G + AV +MEE G P + Y+ L + + ++ A L
Sbjct: 353 LNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKAREL 412
Query: 535 FRKI 538
R++
Sbjct: 413 LREM 416
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 162/356 (45%), Gaps = 1/356 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
VL +M K GV PD + ++D F + G A ++ +E + D+ + + ++ L
Sbjct: 202 VLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLS 261
Query: 245 QRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
V A LFN M K + +TY +I G+ KLG++ + + ++V G +P+ +
Sbjct: 262 GSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVV 321
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T++ L +GL ++G +D A E+ M KG + + YN +++ G+ + +K + M
Sbjct: 322 TYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEM 381
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
P+ TYT L+ K+ ++ A E+ EMLDRG+ P+ T + LC G
Sbjct: 382 KEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKL 441
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
+ K + G + Y ++++ + +++ M G D Y +
Sbjct: 442 EDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNIL 501
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I G C ++ A + +E + K F + Y+ L KL A LF +++
Sbjct: 502 IKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMR 557
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 156/326 (47%), Gaps = 7/326 (2%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ ++M K+G PD T + ++D + + G++ KA + ++ GL + + + LC
Sbjct: 272 LFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLC 331
Query: 245 QRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ + A+ L + M K L N+ TYN +++G K G +++ ++++E+ G PD++
Sbjct: 332 KSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTI 391
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T++ L++ + G + A E+ M ++G P +N +++ G ++ + K M
Sbjct: 392 TYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWM 451
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
PN TY ++ + + E++ M +G+VP + T ++ C
Sbjct: 452 LEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNM 511
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIY 480
A ++K+ + L+ ++Y L++ GF K LL+ L+ EM+ G + EIY
Sbjct: 512 KEAWFLHKEMVEKRFNLTASSYNALIK---GFFKRKKLLEARQLFEEMRREGLVASAEIY 568
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRK 506
+ G +E + + +E++ K
Sbjct: 569 NLFVDMNYEEGNMETTLELCDEAIEK 594
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 152/380 (40%), Gaps = 68/380 (17%)
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
D + + AG + +A + +L ++G+ A S N+ L CL +
Sbjct: 38 DPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSK---------- 87
Query: 257 NSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
M G VL +V E G ++ +++ L+ L R G
Sbjct: 88 RDMLGMVL-----------------------KVFSEFPQLGVCWNTESYNILMNSLFRLG 124
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
+I +A + M+ KGC PD +Y +I Y VG+ + ++ K M +PN+ TY+
Sbjct: 125 KIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYS 184
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+I L KS KV + +V EM+ RG+ P T+ ++ C G AA ++ +
Sbjct: 185 SIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAR 244
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD--------------GEI--- 479
A+ L+ LSG GK L++EM + G+ D GE+
Sbjct: 245 EIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKA 304
Query: 480 ------------------YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
Y + GLC G+L+ A ++ E RKG + Y+ + N
Sbjct: 305 FFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNG 364
Query: 522 LLASNKLESAYNLFRKIKIA 541
L + + A L ++K A
Sbjct: 365 LCKAGNILQAVKLMEEMKEA 384
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 150/349 (42%), Gaps = 51/349 (14%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
+++ + ++ D++ + L GKVV L FN IK D +
Sbjct: 237 LFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKL--------FNEMIK-KGFEPDEVT 287
Query: 166 YNVIVKA---LGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
Y ++ LG K F+ N M + G+ P++ T + + D ++G++ A ++L
Sbjct: 288 YTALIDGYCKLGEMKKAFFLHN---QMVQIGLTPNVVTYTALADGLCKSGELDTANELLH 344
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLG 281
+ GL+ + + N ++ LC+ ++ A L MK L + +TY ++ + K G
Sbjct: 345 EMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTG 404
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD--------------------- 320
++V+ +L+E++ G P +TF+ L+ GL +G+++D
Sbjct: 405 EMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYN 464
Query: 321 --------------AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
+ E++ M +G PD+N YN +I + + E +K M
Sbjct: 465 SIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEK 524
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+Y LI G K +K+ +A ++FEEM G+V S F++
Sbjct: 525 RFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVD 573
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 181/376 (48%), Gaps = 4/376 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EAM LF +K V++Y V++K+L + N++ +M + G+ P++ T ++
Sbjct: 306 EAMDLFVK--MKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++DS + KA ++LG++ + GL + + N ++ C+R + A + M+ +
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
L N TYN +I G+ K V + VL +++ PD +T++ LI+G R+G D A
Sbjct: 424 LSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+ M ++G PD Y ++I + +E + + PN+ YT LI G
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K+ KV +A + E+ML + +P++ T + + LC+ G A ++ +K K+G + ++
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
+ +L+ RL G + +M SG D Y I C G+L +A +M +
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662
Query: 503 SLRKGFCPSRLVYSKL 518
G P YS L
Sbjct: 663 MRENGVSPDLFTYSSL 678
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 176/407 (43%), Gaps = 32/407 (7%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
+L + + F +W ++P V SY ++ L + + + M K
Sbjct: 100 DLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKS------- 152
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
DS A V + + + E F LK+ +++ C L+ A L + M
Sbjct: 153 -----CDSVGDALYVLDLCRKMNKDERFELKY-----KLIIGCYNTLLNSLARFGLVDEM 202
Query: 260 K--------GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
K KV N+ TYN +++G+ KLG V E + + +IV G PD T++ LI G
Sbjct: 203 KQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMG 262
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
+ +D A +VF+ M KGC + AY +I DE M + M C P
Sbjct: 263 YCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPT 322
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+ TYT LI L S + ++AL + +EM + GI P+ T T ++ LCS A +
Sbjct: 323 VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 382
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ + G ++ Y L ++G+ K GM+ +D+ M+ + Y +I G C
Sbjct: 383 QMLEKGLMPNVITYNAL---INGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC 439
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ A+ V+ + L + P + Y+ L + S +SAY L
Sbjct: 440 K-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 170/397 (42%), Gaps = 20/397 (5%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D +Y ++ +L + K + C++ + ++GVNP++ + ++D + +AG+V +A
Sbjct: 493 LVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH 552
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
ML ++ ++ + N ++ LC + A+ L M K + V T I+I
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRL 612
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G +++++ G PD+ T++ I+ R GR+ DA ++ M+E G PD
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 672
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR----------- 386
Y+++I Y +G + K M CEP+ T+ LI LL+ +
Sbjct: 673 FTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPEL 732
Query: 387 -------KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK-ARKVGC 438
+ +E+ E+M++ + P+ + + +C G A ++ R G
Sbjct: 733 CAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGI 792
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
S + LL K + +M G+ E + +I GL G+ E
Sbjct: 793 SPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTS 852
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
V + L+ G+ L + + + + +E+ Y LF
Sbjct: 853 VFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELF 889
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 120/289 (41%), Gaps = 17/289 (5%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +Y ++ R ++++ M + GV+PDL T S ++ + GQ A +L
Sbjct: 636 DAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVL 695
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLG 281
R+ D G + S + L + L + + + + N+M ++ V+
Sbjct: 696 KRMRDTGCE---PSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVV------- 745
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM-KEKGCGPDTNAY 340
+L+++V +P++ ++ LI G+ G + A +VFD M + +G P +
Sbjct: 746 ------ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVF 799
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
NA++S + +E K M P +++ LI GL K + VF+ +L
Sbjct: 800 NALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ 859
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
G ++ + G A ++ K GCK S Y LL+
Sbjct: 860 CGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 180/393 (45%), Gaps = 2/393 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
E + F+ IK ++ DVK+ N I++ L + V M + G+ P + T +
Sbjct: 181 EQCLSVFDKMIKS-RLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNT 239
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
++DS+ + G+V + + +L ++ G + + NV++ L ++ A L M K
Sbjct: 240 LLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTG 299
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ + TYN +I G+ G + E + +E+V +G SP T++ I GL + GR+ DA+
Sbjct: 300 LKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAM 359
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+ M PD +YN +I Y +G+ + + + S P + TY L+ GL
Sbjct: 360 QQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGL 419
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+ ++ A ++ EM++ GI P T T + C G A + + G +L
Sbjct: 420 CRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDS 479
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
AY + G L EM G+P D IY V+ GLC +G LE A ++++
Sbjct: 480 YAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK 539
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ G P + Y+ + + L + +L +F
Sbjct: 540 MVSDGVIPDYVTYTSIIHAHLENGRLRKGREIF 572
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 177/375 (47%), Gaps = 1/375 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ + ++ +M +G +P + T + + + G++ A+Q L +
Sbjct: 306 TYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDM 365
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
L D S N +++ C+ ++ A LF+ ++ LF ++TYN ++ G + G++
Sbjct: 366 LANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGEL 425
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+++ E++ EG +PD +T++ L+ G + G + A E FD M +G D+ AY
Sbjct: 426 EVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATR 485
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I + +GD + M + P++ Y ++ GL K + +A E+ ++M+ G+
Sbjct: 486 IVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGV 545
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+P T TS + G ++ + G S+ Y +L+ +G G+
Sbjct: 546 IPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFI 605
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ EMQE G + Y +I GLC + +++ A E + KG P++ Y+ L N+
Sbjct: 606 YFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENC 665
Query: 524 ASNKLESAYNLFRKI 538
+ A +L++++
Sbjct: 666 NMGNWQEALSLYKQM 680
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 169/377 (44%), Gaps = 1/377 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
VK ++++ ++ + +V M K ++PD++ + ++ + KA+++
Sbjct: 164 VKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYR 223
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+ +FG+K + N +L C+ V L + M+ + N +TYN++I+G SK G
Sbjct: 224 TMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKG 283
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ + + ++ E++ G + T++ LI G G + +A+ + + M KG P YN
Sbjct: 284 EFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYN 343
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+ I +G + M+ M + N P++ +Y LI G + + A +F+E+
Sbjct: 344 SFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSI 403
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
+ P+ T + L+ LC G A + + G + Y +L+ G M
Sbjct: 404 YLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMA 463
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+ + EM G D Y I G +G A + EE L KGF P ++Y+ + +
Sbjct: 464 QEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDG 523
Query: 522 LLASNKLESAYNLFRKI 538
L LE A L +K+
Sbjct: 524 LCKLGNLEEASELLQKM 540
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 178/399 (44%), Gaps = 4/399 (1%)
Query: 137 NRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNP 196
N+G L+ EA+ L +K + V +YN + L + LSDM + P
Sbjct: 316 NKGMLA-EALSLQEEMVLK--GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLP 372
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
D+ + + ++ + R G + KA + L L + N +L LC++ + A L
Sbjct: 373 DVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLK 432
Query: 257 NSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
M + + +++TY I+++G K+G + + E++ EG DS ++ I G +
Sbjct: 433 VEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKL 492
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
G A + + M KG PD YN V+ +G+ +E + + M S P+ TY
Sbjct: 493 GDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY 552
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
T +I L++ ++ E+F EML +G+ PS T T + G A + + + ++
Sbjct: 553 TSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQE 612
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
G ++ Y L+ L + + + EM E G + Y +I CN+G +
Sbjct: 613 KGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQE 672
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
A+ + ++ L +G P +S L +L KL++ L
Sbjct: 673 ALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQL 711
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 111/269 (41%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V +++I +SK V + V +++ SPD + ++ L + A+EV+
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY 222
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
TM E G P YN ++ +Y G + + M C PN TY LI+GL K
Sbjct: 223 RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK 282
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+ A + EML G+ S T + + G A+ + ++ G ++ Y
Sbjct: 283 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATY 342
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+ L G+ + +M + D Y +I G C +G L A L+ +E
Sbjct: 343 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 402
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNL 534
P+ + Y+ L + L +LE A L
Sbjct: 403 IYLFPTIVTYNTLLDGLCRQGELEVAQQL 431
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 95/238 (39%), Gaps = 6/238 (2%)
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
LI + ++ + VFD M + PD N ++ + ++ Y+ M
Sbjct: 167 LDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMG 226
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
+ +P + TY L+ K KV L++ EM RG P+ T + L G
Sbjct: 227 EFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFE 286
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYE 481
A + + K G K+S Y L+ G+ GML L L EM G Y
Sbjct: 287 QAKGLIGEMLKTGLKVSAYTYNPLIY---GYFNKGMLAEALSLQEEMVLKGASPTVATYN 343
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I GLC +G++ +A+ + + L P + Y+ L L A+ LF +++
Sbjct: 344 SFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELR 401
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 186/387 (48%), Gaps = 8/387 (2%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
N+ G ++++ N ++ V +V +YN++V+AL + +L +MA++G PD
Sbjct: 138 NMVGAVVLVYDN--MRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDV 195
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
T + ++ + ++ +A ++L + A S N ++ LC+ + S+ + M
Sbjct: 196 TYATIVSVLCKLDRLDEATEVLAAMPPV-----AASYNAIVLALCREFRMQEVFSVVSDM 250
Query: 260 KGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
G+ L NV+TY ++ + K G++ +L +V G +P+ +TF+ L+ GL GR+
Sbjct: 251 VGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRV 310
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
DA++++ M +G P T +YN +I SVGD M + C PN+ TY+ L
Sbjct: 311 HDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTL 370
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I G K+ + A+ ++ +M G P+ T+ ++ C + A + K C
Sbjct: 371 IDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENC 430
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ + L+R L + G L ++HEM+ G +G Y +I GL G +A+
Sbjct: 431 PPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALH 490
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLAS 525
++ E G S + Y+ + + L +
Sbjct: 491 MVTEMQSHGIELSLVTYNTVVSGLCQT 517
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 157/367 (42%), Gaps = 74/367 (20%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
P VA SYN IV AL R + +V+SDM G+ P++ T + ++D+F +AG++
Sbjct: 221 PPVAA---SYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRM 277
Query: 217 AIQMLGR-------------------LEDFGLKFDA----------------ESLNVVLW 241
A +L R L D G DA S N+++
Sbjct: 278 ACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIR 337
Query: 242 CLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVV-------EMER----- 288
LC + ASS+ NSM+ F NV TY+ +I G+SK G + +M R
Sbjct: 338 GLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKP 397
Query: 289 -----------------------VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
++ +++ E P+++TF+ LI L R+ A+ VF
Sbjct: 398 NVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVF 457
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
M+ GC P+ YN +I G+ + + M S+ E ++ TY ++SGL ++
Sbjct: 458 HEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQT 517
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
R +A+ +M+ +GI P+ T ++ + C G A M V C ++ Y
Sbjct: 518 RMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVY 577
Query: 446 KLLLRRL 452
+L+ L
Sbjct: 578 TILMAEL 584
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 138/327 (42%), Gaps = 31/327 (9%)
Query: 244 CQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C VGA ++++M K V NV TYN+++ + +V ++L E+ +G PD
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKE------------------------------KG 332
+T++ ++ L + R+D+A EV M +G
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRG 254
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ Y ++ + G+ M C PN+ T+T L+ GL +V DAL
Sbjct: 255 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDAL 314
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+++ M+ G PST + + LCS G A + + GC ++ Y L+
Sbjct: 315 DMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGF 374
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
S G G + +W++M SG + +Y ++ C A ++++ L + P+
Sbjct: 375 SKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNT 434
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKIK 539
+ ++ L L ++ A +F +++
Sbjct: 435 VTFNTLIRSLCDCRRVGRALGVFHEMR 461
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 177/378 (46%), Gaps = 1/378 (0%)
Query: 130 DVVGKVVNRGNLSGEAMVLFFNWAIKHP-NVAKDVKSYNVIVKALGRRKFFDFMCNVLSD 188
++V V+ R G + FF++ H D S+++ + R + +++
Sbjct: 51 NLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHR 110
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + P +T +IV + + AG+ KA+++ + + G D S N +L LC+
Sbjct: 111 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 170
Query: 249 VGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
V A LF +++G+ + +TYN++++GW + + + VLKE+V G +P+ T++ +
Sbjct: 171 VEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTM 230
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
++G RAG+I A E F MK++ C D Y V+ + G+ + M
Sbjct: 231 LKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGV 290
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P++ TY +I L K V +A+ +FEEM+ RG P+ T + L G
Sbjct: 291 LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEE 350
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ ++ GC+ + Y +++R S + L L+ +M + + Y +I+G+
Sbjct: 351 LMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMF 410
Query: 489 NIGQLENAVLVMEESLRK 506
+ E+ V+ ++ K
Sbjct: 411 VRKRSEDMVVAGNQAFAK 428
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 113/243 (46%), Gaps = 7/243 (2%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P TF+ + E AG+ D A+++F M E GC D ++N ++ ++ +
Sbjct: 118 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 177
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
++ + + TY +++G ++ LEV +EM++RGI P+ T + L+
Sbjct: 178 FRALRG-RFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFR 236
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSD 476
G A + + +K C++ + Y ++ GFG G + +++ EM G
Sbjct: 237 AGQIRHAWEFFLEMKKRDCEIDVVTYTTVVH---GFGVAGEIKRARNVFDEMIREGVLPS 293
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
Y +I LC +ENAV++ EE +R+G+ P+ Y+ L L + + L +
Sbjct: 294 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 353
Query: 537 KIK 539
+++
Sbjct: 354 RME 356
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 146/327 (44%), Gaps = 6/327 (1%)
Query: 216 KAIQMLGRLEDFGLKF--DAESLNVVLWCLCQRLHVGAAS-SLFNSMKG-KVLFNVMTYN 271
KA+Q L++ ++ DA S ++ + + RLH+ SL + M+ ++ + T+
Sbjct: 66 KALQFFHFLDNHHREYVHDASSFDLAI-DIAARLHLHPTVWSLIHRMRSLRIGPSPKTFA 124
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
IV ++ G+ + ++ + G D +F+ +++ L ++ R++ A E+F ++ +
Sbjct: 125 IVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR 184
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
DT YN +++ + + + ++ K M PN+ TY ++ G ++ ++ A
Sbjct: 185 -FSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHA 243
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
E F EM R T T+ + G A ++ + + G S+ Y +++
Sbjct: 244 WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQV 303
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L + ++ EM GY + Y +I GL + G+ +M+ +G P+
Sbjct: 304 LCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 363
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
Y+ + +++E A LF K+
Sbjct: 364 FQTYNMMIRYYSECSEVEKALGLFEKM 390
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 177/382 (46%), Gaps = 2/382 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y ++ L + +L M ++ P++ + ++DS + QV +A +
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ G+ D + N ++ LC ++L N M K++ +V+++N V+ K
Sbjct: 225 SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE 284
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+V E V+ +++ G P+ +T++ L++G +D+A++VFDTM KGC P+ +Y
Sbjct: 285 GKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISY 344
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I+ Y + D+ M + M P+ TY+ LI GL ++ DA+ +F EM+
Sbjct: 345 NTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVA 404
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+P+ T L+ LC AM + K + + + + G+
Sbjct: 405 CSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEA 464
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
DL+ + G D Y +I GLC G L+ A + E G + +Y+ ++
Sbjct: 465 ARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITR 524
Query: 521 KLLASNKLESAYNLFRKIKIAR 542
L +N+ A L +++ +AR
Sbjct: 525 GFLRNNETSRAIQLLQEM-VAR 545
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 177/378 (46%), Gaps = 1/378 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D ++ +++ + ++ M EG PD+ T +++ + G AI++L
Sbjct: 130 DTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLL 189
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
G + + + + N ++ LC+ V A +LF+ M K + ++ TYN +I L
Sbjct: 190 GSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNL 249
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ + +L E+V PD ++F+ +++ L + G++ +A +V D M ++G P+ Y
Sbjct: 250 CEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTY 309
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
A++ + + + DE +K + M C PN+ +Y LI+G K +++ A+ +F EM
Sbjct: 310 TALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCR 369
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+ ++P T T ++ + LC A+ ++ + +L Y++LL L
Sbjct: 370 QELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAE 429
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ L ++ S D ++ I G+C G+LE A + KG P YS + N
Sbjct: 430 AMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMIN 489
Query: 521 KLLASNKLESAYNLFRKI 538
L L+ A LFR++
Sbjct: 490 GLCRRGLLDEASKLFREM 507
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 176/375 (46%), Gaps = 1/375 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
+N ++ ++ + K + ++ M G+ P++ TL I+++SF +V A +L ++
Sbjct: 64 FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVV 284
G + D + ++ + +G A LF+ M G+ +V+TY +I+G K+G
Sbjct: 124 KLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
R+L +V + P+ ++ +I+ L + ++ +A +F M KG PD YN++I
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLI 243
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
++ ++ M P++ ++ ++ L K KV +A +V ++M+ RG+
Sbjct: 244 HALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVE 303
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P+ T T+ ++ C A+ ++ GC ++ +Y L+ + + L
Sbjct: 304 PNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYL 363
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+ EM D Y +I GLC++ +L++A+ + E + P+ + Y L + L
Sbjct: 364 FGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCK 423
Query: 525 SNKLESAYNLFRKIK 539
+ L A L + I+
Sbjct: 424 NRYLAEAMALLKAIE 438
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 122/529 (23%), Positives = 237/529 (44%), Gaps = 36/529 (6%)
Query: 5 SRFYRTRYPLSSLSSSFSLFSFSTSVR-----SNLSYNELLSNQKKNMSSLDEHHVLKEL 59
+RF+ +++ + S SF+ +R S + +N+LL++ ++ + H L L
Sbjct: 30 NRFHSKSLHFNTIDGAIS--SFNRMLRMQPPPSTVDFNKLLTS----IAKMKHHSTLLSL 83
Query: 60 SDLFQISSHNSFPNVYK-ESRSNS---VKRIDSSRAVDEFLL-----PEERLRGVFLQKL 110
S Q+ S PN+Y NS + R+ + +V +L P+ ++ +
Sbjct: 84 S--HQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGI 141
Query: 111 KGKGVIEDALW----NVNVDLSLDVV--GKVVNR----GNLSGEAMVLFFNWAIKHPNVA 160
+G I +AL + DVV G ++N GN S +L ++ N
Sbjct: 142 YVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLL---GSMVQKNCQ 198
Query: 161 KDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
+V +YN I+ +L + + N+ S+M +G++PD+ T + ++ + + +
Sbjct: 199 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATL 258
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSK 279
L + D + D S N V+ LC+ V A + + M + V NV+TY ++ G
Sbjct: 259 LNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCL 318
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
L ++ E +V +V +G P+ ++++ LI G + RID A+ +F M + PDT
Sbjct: 319 LSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVT 378
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y+ +I V + + + M + + PN+ TY L+ L K+R +A+A+ + + +
Sbjct: 379 YSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIE 438
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
+ P ++ +C G AA ++ G + + Y +++ L G
Sbjct: 439 GSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLD 498
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L+ EM E+G +G IY + G + A+ +++E + +GF
Sbjct: 499 EASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGF 547
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 138/316 (43%), Gaps = 41/316 (12%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N+ T +I+I+ + L +V VL +I+ G PD+ TF+ LI G+ G+I +A+ +F
Sbjct: 95 NIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLF 154
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M +G PD Y +I+ VG+ ++ M NC+PN+ Y +I L K
Sbjct: 155 DKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKD 214
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP-PHAAMMMYKKARKVGCKL--SL 442
R+V +A +F EM+ +GI P T S + LC+ H A ++ + V K+ +
Sbjct: 215 RQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEM---VDSKIMPDV 271
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS---------DGEI-------------- 479
++ ++ L GK D+ +M + G DG
Sbjct: 272 VSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDT 331
Query: 480 ------------YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
Y +I G C I +++ A+ + E R+ P + YS L + L +
Sbjct: 332 MVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVER 391
Query: 528 LESAYNLFRKIKIARQ 543
L+ A LF ++ Q
Sbjct: 392 LQDAIALFHEMVACSQ 407
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 161/349 (46%), Gaps = 3/349 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA LF K ++ D+ +YN ++ AL + + +L++M + PD+ + +
Sbjct: 219 EAFNLFSEMVTK--GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNT 276
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
V+D+ + G+V +A ++ ++ G++ + + ++ C + A +F++M K
Sbjct: 277 VVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKG 336
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ NV++YN +I+G+ K+ ++ + + E+ + PD++T+S LI GL R+ DAI
Sbjct: 337 CMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAI 396
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+F M P+ Y ++ E M K + N +P++ I G+
Sbjct: 397 ALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGM 456
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
++ ++ A ++F + +G+ P T + + LC G A ++++ + GC L+
Sbjct: 457 CRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNG 516
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
Y + R + + L EM G+ +D + L + G
Sbjct: 517 CIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 565
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 121/286 (42%)
Query: 250 GAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
GA SS ++ + + + +N +++ +K+ + + ++ + G P+ T LI
Sbjct: 44 GAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILI 103
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
R+ A V + + G PDT + +I G E + + M
Sbjct: 104 NSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFR 163
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P++ TY LI+GL K + A+ + M+ + P+ + ++ LC A +
Sbjct: 164 PDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNL 223
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ + G + Y L+ L + + L +EM +S D + V+ LC
Sbjct: 224 FSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCK 283
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
G++ A V+++ +++G P+ + Y+ L + ++++ A +F
Sbjct: 284 EGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVF 329
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 100/256 (39%), Gaps = 35/256 (13%)
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM----- 372
ID AI F+ M P T +N ++++ + + M S+ PN+
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 373 ------------------------------DTYTRLISGLLKSRKVADALEVFEEMLDRG 402
T+T LI G+ K+ +AL +F++M+ G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P T + + LC G AA+ + + C+ ++ AY ++ L +
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+L+ EM G D Y +I LCN+ + ++ ++ E + P + ++ + + L
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281
Query: 523 LASNKLESAYNLFRKI 538
K+ A+++ K+
Sbjct: 282 CKEGKVTEAHDVVDKM 297
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 86/200 (43%)
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
++N S + D + + M P+ + +L++ + K + + L + +M
Sbjct: 28 SHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQM 87
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
GI P+ T+ + C A + K K+G + + L+R + GK
Sbjct: 88 DSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKI 147
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
G L L+ +M G+ D Y +I GLC +G A+ ++ ++K P+ Y+ +
Sbjct: 148 GEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTI 207
Query: 519 SNKLLASNKLESAYNLFRKI 538
+ L ++ A+NLF ++
Sbjct: 208 IDSLCKDRQVTEAFNLFSEM 227
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 182/395 (46%), Gaps = 14/395 (3%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N+ DV +Y +++ L + + +M G+ P+ SIV+ +A +++ A
Sbjct: 193 NLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDA 252
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG 276
++ ++ G D + NV+L C+ ++ A +L + K + V+ Y +I+G
Sbjct: 253 QRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLING 312
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ + E ++++ E PD + ++ +I GL + GR+ +A+ + M E+G PD
Sbjct: 313 LFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPD 372
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
T YNA+I + +G DE +S ++C PN TY+ LI G+ K+ + A +F+
Sbjct: 373 TICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFK 432
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK---ARKVGCKLSLT---------- 443
EM G +PS T S + LC A +++ + RK L L+
Sbjct: 433 EMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIA 492
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
+ ++++ RL G L ++ +SG D Y +I G C G + A + +E
Sbjct: 493 SLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEM 552
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
KG P + Y L + L + + E A +F ++
Sbjct: 553 QLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQM 587
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 187/404 (46%), Gaps = 4/404 (0%)
Query: 149 FFNWAIKHPNV-AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
F W++K ++ + V+ ++I+ L + F+ VL ++ + E S+++++
Sbjct: 80 LFIWSLKSWHLRCRTVQ--DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEA 137
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFN 266
+ AG KA++ + DF K D + N++L L ++ A +++N M K + +
Sbjct: 138 YSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPD 197
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V+TY I+I G K + + + E+ G P+ + +S ++ GL +A +I DA +F
Sbjct: 198 VVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFS 257
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M+ GC D YN +++ + G D+ + ++ + Y LI+GL ++R
Sbjct: 258 KMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRAR 317
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+ +A +++ML I P T + L G A+ + + + G + Y
Sbjct: 318 RYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYN 377
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L++ G L E+ + + Y +I G+C G + A + +E +
Sbjct: 378 ALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKL 437
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYARRL 550
G PS + ++ L N L +N+LE A LF +++I R+ RL
Sbjct: 438 GCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRL 481
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 166/354 (46%), Gaps = 25/354 (7%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y++++ + + + ++ +M K G P + T + +++ +A ++ +A + ++
Sbjct: 410 TYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM 469
Query: 225 E-----DFGLK--------FDAESLNVVLWCLCQR-LHVGAASSLFNSMKGKVLFNVMTY 270
E L+ FD SL V++ LC+ + + A L + VL ++ TY
Sbjct: 470 EIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTY 529
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
NI+I+G+ K G + ++ KE+ +G PDS+T+ LI+GL RAGR +DA+E+F+ M +
Sbjct: 530 NILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVK 589
Query: 331 KGCGPDTNAYNAVIS-----NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
KGC P+++ Y +++ N IS+ MKY + + D R+++ +
Sbjct: 590 KGCVPESSTYKTIMTWSCRENNISLA-LSVWMKYLRDFRGWE-----DEKVRVVAESFDN 643
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
++ A+ EM + T FL L A ++ + +S +
Sbjct: 644 EELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASC 703
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+L+ RL M +D++ E G+ I ++ L ++ + ++A+ +
Sbjct: 704 VMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPICNQLLCNLLHLDRKDDALFL 757
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 195/398 (48%), Gaps = 7/398 (1%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
E+ L+F PN+ ++YN+++K R+K FD +L+ M ++G +PD+ +
Sbjct: 133 AESFFLYFETMGLSPNL----QTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYG 188
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS-MKG 261
+++S + G + A+++ + + G+ D N+++ ++ + AS ++ +KG
Sbjct: 189 TLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKG 248
Query: 262 KVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
++ N+ +YN++I+G K G+ E + + D T+S LI GL +G +D
Sbjct: 249 PSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDG 308
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A V+ M E G PD YN +++ Y+ G +EC++ +K M C + +Y LI
Sbjct: 309 ATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIR 367
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
GL ++ KV +A+ ++E + ++ + T + LC G + A+ + ++A L
Sbjct: 368 GLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL 427
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
AY ++ L G+ + + +M + G + + VI G +LE+A+
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ KG P+ + Y+ L N L + + AY L +++
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 181/380 (47%), Gaps = 37/380 (9%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
+D+ +Y+ ++ L D V +MA+ GV+PD+ + +++ ++RAG++ + ++
Sbjct: 287 GQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE 346
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
+ +E G + S N+++ L + V A S++ + K + MTY +++ G
Sbjct: 347 LWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 405
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G + + +L+E D+ +S +I GL R GR+D+ V D M + GC P+ +
Sbjct: 406 KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPH 465
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
NAVI+ ++ ++ ++++ M S C P + TY LI+GL K+ + ++A + +EM
Sbjct: 466 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
L +G P ++ Y LL+ L K
Sbjct: 526 LHKGWKP-----------------------------------NMITYSLLMNGLCQGKKL 550
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
M L+LW + E G+ D +++ +I GLC+ G++E+A+ + E ++ P+ + ++ L
Sbjct: 551 DMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTL 610
Query: 519 SNKLLASNKLESAYNLFRKI 538
E A ++ I
Sbjct: 611 MEGFYKVRDFERASKIWDHI 630
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 174/428 (40%), Gaps = 39/428 (9%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F+ + P + ++ I+K L K + ++ + + + V+ ++
Sbjct: 29 IFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVIKAY 88
Query: 209 IRAGQVYKAIQMLGRL-EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-N 266
+ +A+ + R+ E FG + S N +L L + A S F + L N
Sbjct: 89 AKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPN 148
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
+ TYNI+I + Q + + +L + +GFSPD ++ LI L + G + DA+++FD
Sbjct: 149 LQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFD 208
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGD---------------------------------- 352
M E+G PD YN +I + GD
Sbjct: 209 EMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKC 268
Query: 353 --FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
FDE + + M ++ TY+ LI GL S + A V++EM + G+ P
Sbjct: 269 GKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVY 328
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+ L G + ++K K GC+ ++ +Y +L+R L K + +W + E
Sbjct: 329 NTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPE 387
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
+D Y ++ GLC G L A+ ++EE+ YS + N L +L+
Sbjct: 388 KDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDE 447
Query: 531 AYNLFRKI 538
+ ++
Sbjct: 448 VAGVLDQM 455
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 130/250 (52%), Gaps = 3/250 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +Y+ ++ L R D + VL M K G P+ + V++ F+RA ++ A++
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
G + G + N ++ L + A +L M K N++TY+++++G +
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQ- 546
Query: 281 GQVVEME-RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G+ ++M + + + +GF PD + +I GL +G+++DA++++ MK++ C P+
Sbjct: 547 GKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVT 606
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
+N ++ + V DF+ K + + Y +P++ +Y + GL +++DA+ + +
Sbjct: 607 HNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAV 666
Query: 400 DRGIVPSTGT 409
DRG++P+ T
Sbjct: 667 DRGVLPTAIT 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 95/190 (50%), Gaps = 1/190 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +YN ++ L + + F ++ +M +G P++ T S++M+ + ++ A+ +
Sbjct: 499 VVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWC 558
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLG 281
+ + G K D + N+++ LC V A L++ MK K + N++T+N ++ G+ K+
Sbjct: 559 QALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVR 618
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ I+ G PD ++++ ++GL RI DA+ + ++G P +N
Sbjct: 619 DFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWN 678
Query: 342 AVISNYISVG 351
++ + G
Sbjct: 679 ILVRAVLDNG 688
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 173/353 (49%), Gaps = 2/353 (0%)
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAAS 253
V PD+ + ++DSF + V A + + + + + N +++ C + A
Sbjct: 190 VRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAV 249
Query: 254 SLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
L N M V NV T+NI+I G K G+V + VL ++ +G P+ +T++ L++G
Sbjct: 250 GLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGY 309
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
++ A VF+T+ +G P+ ++Y+ +I+ DE +K +K M N PN
Sbjct: 310 FLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNT 369
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
TY+ LI GL KS +++D ++ +E+ +RG + T S L LC A+ + K
Sbjct: 370 VTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTK 429
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+ G + ++ Y L+ L G+ ++ ++ GYP + +Y +I GLC G
Sbjct: 430 MKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGF 489
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQND 545
+ A+ ++ + G P + Y L + L +NK A L R++ IAR++D
Sbjct: 490 FDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREM-IARESD 541
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 130/261 (49%), Gaps = 1/261 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
NV +V ++N+++ L + +VLS M K+GV P++ T + +MD + +V KA
Sbjct: 259 NVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKA 318
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISG 276
+ + G+ + S +V++ LC+ V A LF M K + N +TY+ +I G
Sbjct: 319 KHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDG 378
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K G++ ++ ++ EI G + +T++ L+ GL + ++D AI + MK++G PD
Sbjct: 379 LCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPD 438
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+ Y ++ G + + Y+ + N+ YT +I+GL K +AL +
Sbjct: 439 MSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLS 498
Query: 397 EMLDRGIVPSTGTITSFLEPL 417
+M D G +P T + + L
Sbjct: 499 QMEDNGCMPDAVTYETLISAL 519
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 136/306 (44%), Gaps = 2/306 (0%)
Query: 237 NVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
N +L L + H A S M+ K + + T+NI+I+ +S L Q+ ++ +I+
Sbjct: 57 NKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILK 116
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
G+ PD++T + L+ GL G++ +A+ D + K D +Y +I+ G+
Sbjct: 117 LGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRA 176
Query: 356 CMKYYKGMSS-YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
++ + + P++ YT +I K + V DA +++ EM+ + I P+ T S +
Sbjct: 177 ALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLI 236
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
C G A+ + + ++ + +L+ L G+ + M + G
Sbjct: 237 YGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVE 296
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
+ Y ++ G + ++ A V +G P+ YS + N L + ++ A L
Sbjct: 297 PNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKL 356
Query: 535 FRKIKI 540
F+++ +
Sbjct: 357 FKEMHL 362
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/311 (18%), Positives = 128/311 (41%), Gaps = 13/311 (4%)
Query: 243 LCQRLHVGAASSLFNSMKGKVL-FN-----------VMTYNIVISGWSKLGQVVEMERVL 290
L +RLH+ S +++ V FN + +N ++S K+
Sbjct: 17 LNRRLHIQPLPSFIDNLDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFS 76
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
+++ +G P+ TF+ LI +++ A + + + G PDT N ++
Sbjct: 77 QQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLN 136
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV-PSTGT 409
G E + ++ + + +Y LI+GL KS + AL++ ++ +V P
Sbjct: 137 GKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIM 196
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
T+ ++ C A +Y + ++ + L+ G+ + L +EM
Sbjct: 197 YTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMS 256
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
+ + + +I GLC G+++ A V+ +++G P+ + Y+ L + ++
Sbjct: 257 LNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVN 316
Query: 530 SAYNLFRKIKI 540
A ++F I +
Sbjct: 317 KAKHVFNTISL 327
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 185/379 (48%), Gaps = 9/379 (2%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D +YN ++ RR F + +M ++GV PDL + S ++ F R + +A+
Sbjct: 219 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQAL 278
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
++ FGL D V++ C+ ++ A + + M +G VL +V+ YN +++G
Sbjct: 279 VYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL-DVIAYNTILNG 337
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K + + +++ E+V G PD TF+ LI G + G + A+ +F TM ++ PD
Sbjct: 338 LCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPD 397
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
AYN +I + VG+ ++ + + GM S PN TY LI+ V++A +++
Sbjct: 398 IVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWD 457
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
M+++GI P+ T + ++ C G A + G +Y L+ +GF
Sbjct: 458 VMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI---NGFV 514
Query: 457 KCGMLLD--LW-HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
+ + LW ++M++ G D Y V+ G C G+++ A LV+ + + KG P R
Sbjct: 515 REDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRS 574
Query: 514 VYSKLSNKLLASNKLESAY 532
Y+ L N + + L A+
Sbjct: 575 TYTALINGHVTQDNLNEAF 593
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 164/351 (46%), Gaps = 1/351 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V + N++V AL + FD + + LS+M G+ D+ T + ++ ++ R G + +A +++
Sbjct: 117 NVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIM 176
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
+ D GLK + N ++ LC++ A + M L + TYN ++ +
Sbjct: 177 NSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRR 236
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
E + + E++ +G PD ++FS LI R +D A+ F MK+ G PD Y
Sbjct: 237 DNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIY 296
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++ Y G+ E +K M C ++ Y +++GL K + + DA ++F+EM++
Sbjct: 297 TVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVE 356
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
RG +P T T+ + C G A+ ++ + K + AY L+ G+
Sbjct: 357 RGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEK 416
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
+LW M + Y +I C++G + A + + + KG P+
Sbjct: 417 ASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPT 467
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 122/280 (43%), Gaps = 36/280 (12%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN I+ L + K + +M + G PD T + ++ + G + KA+ +
Sbjct: 327 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 386
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
G + +K D + N ++ C+ + AS L++ M + +F N +TY I+I+ + +
Sbjct: 387 GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSV 446
Query: 281 GQVVEMERV-----------------------------------LKEIVAEGFSPDSLTF 305
G V E R+ L ++A+G +PD +++
Sbjct: 447 GHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISY 506
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LI G R +D A + M+++G PD YN V++ + G E + M
Sbjct: 507 NTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIE 566
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
P+ TYT LI+G + + +A +EML RG P
Sbjct: 567 KGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAP 606
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 118/275 (42%)
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
L ++ N ++ G K+ V V +E+V G + T + ++ L + G+ DD
Sbjct: 80 LVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKS 139
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
M+ G D YN +I Y G +E + M+ +P++ TY +I+GL
Sbjct: 140 FLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLC 199
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
K + A A + EML+ G+ P T T + L C A ++ + + G L
Sbjct: 200 KKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLV 259
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
++ L+ S L + +M++ G D IY ++ G C G + A+ + +E
Sbjct: 260 SFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEM 319
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
L +G + Y+ + N L L A LF ++
Sbjct: 320 LEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM 354
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 112/234 (47%), Gaps = 4/234 (1%)
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
GN++ +A+ LF + N+ D+ +YN ++ + + + M + P+
Sbjct: 377 GNMT-KALSLF--GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNH 433
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
T I+++++ G V +A ++ + + G+K + N V+ C+ A
Sbjct: 434 ITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGR 493
Query: 259 MKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
M K V + ++YN +I+G+ + + + + ++ EG PD +T++ ++ G R GR
Sbjct: 494 MIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGR 553
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
+ +A V M EKG PD + Y A+I+ +++ + +E +++ M P+
Sbjct: 554 MQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 96/256 (37%)
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
VE+ L + ++L F LI +A ++ + E F ++ KG NA N++
Sbjct: 30 VEVVEALVSSMCGNCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSL 89
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ + + + + ++ + E N+ T +++ L K K D EM GI
Sbjct: 90 LGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGI 149
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
T + + C G A + G K SL Y ++ L G+
Sbjct: 150 YADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKG 209
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ EM G D Y ++ C A + E LR+G P + +S L
Sbjct: 210 ILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFS 269
Query: 524 ASNKLESAYNLFRKIK 539
+ L+ A FR +K
Sbjct: 270 RNRHLDQALVYFRDMK 285
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 36/151 (23%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M ++G+ P L T + V+ + R+G KA + LGR+ G+ D S N ++ + +
Sbjct: 459 MIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDN 518
Query: 249 VGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLK---------------- 291
+ A N M K +L +++TYN+V++G+ + G++ E E VL+
Sbjct: 519 MDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTA 578
Query: 292 -------------------EIVAEGFSPDSL 303
E++ GF+PD +
Sbjct: 579 LINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 182/401 (45%), Gaps = 3/401 (0%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
N EA+ F K P +N ++ ++ + K + ++ M G+ PD+
Sbjct: 49 NTLDEALSTFNRMLHKQP--PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVY 106
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
TL+IV++S +V A L ++ G + DA + ++ LC +G A LF+ M
Sbjct: 107 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 166
Query: 260 KGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
G+ NV+TY +I+G K+G R+L+ + P+ + FS LI+ L + ++
Sbjct: 167 IGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQV 226
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
+A +F M KG P+ YN++I + ++ M P++ T +
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 286
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
+ L K VA+A +V + M+ RG+ P+ T + ++ C A+ ++ C
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 346
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
++ +Y L+ + L+ EM + Y +I GLC++G+L++A+
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ E + +G P + Y LS+ L + L+ A L + I+
Sbjct: 407 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIE 447
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 199/461 (43%), Gaps = 35/461 (7%)
Query: 89 SRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVN-VDLSLDVVGKVVNRGNLS----- 142
SR +D F +P + + ++ ++L ++N VD + + K++ G+
Sbjct: 93 SRQMDSFGIPPD---------VYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTF 143
Query: 143 -------------GEAMVLFFNWAIK--HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLS 187
GEA+ LF + PNV +Y ++ L + +L
Sbjct: 144 TTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVV----TYGTLINGLCKVGNTSAAIRLLR 199
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
M + P++ S ++DS + QV +A + + G+ + + N ++ LC+
Sbjct: 200 SMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLC 259
Query: 248 HVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
++L N M K++ +V T N V+ K G V E V+ ++ G P+ +T++
Sbjct: 260 EWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYN 319
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
L++G +D A++VFDTM K C + +YN +I+ Y + D+ M ++ MS
Sbjct: 320 ALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ 379
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
PN TY LI GL ++ DA+ +F EM+ RG +P T + + LC A
Sbjct: 380 ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKA 439
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
M + K + Y +L + G+ DL+ + G + Y +I G
Sbjct: 440 MALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHG 499
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
LC G L A + E + G P+ Y+ ++ L +N+
Sbjct: 500 LCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNE 540
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 177/353 (50%), Gaps = 11/353 (3%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ ++ +YN ++ L + + + ++++M + PD+ TL+ V+D+ + G V +A
Sbjct: 241 ISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAH 300
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ + G++ + + N ++ C R V A +F++M K + NV++YN +I+G+
Sbjct: 301 DVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGY 360
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K+ V + + +E+ + +P+++T++ LI GL GR+ DAI +F M +G PD
Sbjct: 361 CKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDL 420
Query: 338 NAYNAVISNYISVG-DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y +S+Y+ D+ M K + N +P++ YT ++ G+ ++ ++ DA ++F
Sbjct: 421 VTYRT-LSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFS 479
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+ +G+ P+ T + LC G A ++ + K GC + Y L+ R
Sbjct: 480 NLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNN 539
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
+ ++L EM G+ D ++ L + G +++S+++ C
Sbjct: 540 EALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG--------LDQSVKQILC 584
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 2/203 (0%)
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
++++N S + DE + + M P+ + RL++ + K++ + L +
Sbjct: 35 SSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSR 94
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+M GI P T+ + LC A K K+G + T + L+R L G
Sbjct: 95 QMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEG 154
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRLVY 515
K G L L+ +M G+ + Y +I GLC +G A+ ++ S+ +G C P+ +V+
Sbjct: 155 KIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLL-RSMEQGNCQPNVVVF 213
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
S L + L ++ A+N+F ++
Sbjct: 214 STLIDSLCKDRQVTEAFNIFSEM 236
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/525 (22%), Positives = 223/525 (42%), Gaps = 89/525 (16%)
Query: 99 EERLRGVFLQKLKGKGVIEDA------LWNVNVDLSLD----VVGKVVNRGNLSGEAMVL 148
+ R+ VF Q L G++ +A + N + LS+D + ++ N + A+++
Sbjct: 597 DPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIV 656
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F + V +V SYN+++ + + + ++L M +G PD+ + S V++ +
Sbjct: 657 FREFP--EVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGY 714
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--- 265
R G++ K +++ +++ GLK ++ + ++ LC+ + A F+ M G+ +
Sbjct: 715 CRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDT 774
Query: 266 ---------------------------------NVMTYNIVISGWSKLGQVVEMERVLKE 292
+V+TY +ISG+ ++G +VE ++ E
Sbjct: 775 IVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 834
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
++ G PD +TF+ L+ G +AG I DA V + M + GC P+ Y +I GD
Sbjct: 835 MLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 894
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
D + M +PN+ TY +++GL KS + +A+++ E G+ T T T+
Sbjct: 895 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 954
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD--------- 463
++ C G A + + G + ++ + +L+ +GF GML D
Sbjct: 955 LMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLM---NGFCLHGMLEDGEKLLNWML 1011
Query: 464 -----------------------------LWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
++ +M G DG+ YE ++ G CN ++
Sbjct: 1012 AKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMK 1071
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
A + +E KGF S YS L K A +F +++
Sbjct: 1072 EAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMR 1116
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 188/404 (46%), Gaps = 15/404 (3%)
Query: 144 EAMVLFFNWAI-KHPNVAKDVKSYNVIVKALGR-------RKFFDFMCNVLSDMAKEGVN 195
E+ V FF+ + + + D + ++V + L RK F+ M N ++ + N
Sbjct: 578 ESFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCN 637
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
L LS + AI + + G+ ++ S N+V+ +CQ + A L
Sbjct: 638 VYLARLSK------DCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHL 691
Query: 256 FNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
M+ K +V++Y+ VI+G+ + G++ ++ ++++++ +G P+S T+ +I L R
Sbjct: 692 LLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCR 751
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
++ +A E F M +G PDT Y ++ + GD K++ M S + P++ T
Sbjct: 752 ICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLT 811
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
YT +ISG + + +A ++F EML RG+ P T T + C G A ++
Sbjct: 812 YTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMI 871
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
+ GC ++ Y L+ L G +L HEM + G + Y ++ GLC G +E
Sbjct: 872 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 931
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
AV ++ E G + Y+ L + S +++ A + ++
Sbjct: 932 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEM 975
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/377 (19%), Positives = 175/377 (46%), Gaps = 10/377 (2%)
Query: 107 LQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSY 166
++ G+G++ D + + +V RG++ + F + + ++ DV +Y
Sbjct: 762 FSEMIGQGILPDTI------VYTTLVDGFCKRGDIRAASK---FFYEMHSRDITPDVLTY 812
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
I+ + + +M G+ PD+ T + +M+ + +AG + A ++ +
Sbjct: 813 TAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQ 872
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVE 285
G + + ++ LC+ + +A+ L + M K + N+ TYN +++G K G + E
Sbjct: 873 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 932
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+++ E A G + D++T++ L++ ++G +D A E+ M KG P +N +++
Sbjct: 933 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMN 992
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+ G ++ K M + PN T+ L+ + A ++++M RG+ P
Sbjct: 993 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEP 1052
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
T + ++ C+ A ++++ + G +S++ Y +L++ K +++
Sbjct: 1053 DGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIF 1112
Query: 466 HEMQESGYPSDGEIYEY 482
+M+ G +D EI+++
Sbjct: 1113 DQMRRDGLAADKEIFDF 1129
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 182/401 (45%), Gaps = 3/401 (0%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
N EA+ F K P +N ++ ++ + K + ++ M G+ PD+
Sbjct: 49 NTLDEALSTFNRMLHKQP--PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVY 106
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
TL+IV++S +V A L ++ G + DA + ++ LC +G A LF+ M
Sbjct: 107 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 166
Query: 260 KGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
G+ NV+TY +I+G K+G R+L+ + P+ + FS LI+ L + ++
Sbjct: 167 IGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQV 226
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
+A +F M KG P+ YN++I + ++ M P++ T +
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 286
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
+ L K VA+A +V + M+ RG+ P+ T + ++ C A+ ++ C
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 346
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
++ +Y L+ + L+ EM + Y +I GLC++G+L++A+
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ E + +G P + Y LS+ L + L+ A L + I+
Sbjct: 407 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIE 447
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 199/461 (43%), Gaps = 35/461 (7%)
Query: 89 SRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVN-VDLSLDVVGKVVNRGNLS----- 142
SR +D F +P + + ++ ++L ++N VD + + K++ G+
Sbjct: 93 SRQMDSFGIPPD---------VYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTF 143
Query: 143 -------------GEAMVLFFNWAIK--HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLS 187
GEA+ LF + PNV +Y ++ L + +L
Sbjct: 144 TTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVV----TYGTLINGLCKVGNTSAAIRLLR 199
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
M + P++ S ++DS + QV +A + + G+ + + N ++ LC+
Sbjct: 200 SMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLC 259
Query: 248 HVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
++L N M K++ +V T N V+ K G V E V+ ++ G P+ +T++
Sbjct: 260 EWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYN 319
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
L++G +D A++VFDTM K C + +YN +I+ Y + D+ M ++ MS
Sbjct: 320 ALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ 379
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
PN TY LI GL ++ DA+ +F EM+ RG +P T + + LC A
Sbjct: 380 ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKA 439
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
M + K + Y +L + G+ DL+ + G + Y +I G
Sbjct: 440 MALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHG 499
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
LC G L A + E + G P+ Y+ ++ L +N+
Sbjct: 500 LCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNE 540
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 181/361 (50%), Gaps = 11/361 (3%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ ++ +YN ++ L + + + ++++M + PD+ TL+ V+D+ + G V +A
Sbjct: 241 ISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAH 300
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ + G++ + + N ++ C R V A +F++M K + NV++YN +I+G+
Sbjct: 301 DVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGY 360
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K+ V + + +E+ + +P+++T++ LI GL GR+ DAI +F M +G PD
Sbjct: 361 CKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDL 420
Query: 338 NAYNAVISNYISVG-DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y +S+Y+ D+ M K + N +P++ YT ++ G+ ++ ++ DA ++F
Sbjct: 421 VTYRT-LSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFS 479
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+ +G+ P+ T + LC G A ++ + K GC + Y L+ R
Sbjct: 480 NLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNN 539
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ ++L EM G+ D ++ L + G +++S+++ C ++Y
Sbjct: 540 EALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG--------LDQSVKQILCKIVILYE 591
Query: 517 K 517
+
Sbjct: 592 R 592
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 2/203 (0%)
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
++++N S + DE + + M P+ + RL++ + K++ + L +
Sbjct: 35 SSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSR 94
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+M GI P T+ + LC A K K+G + T + L+R L G
Sbjct: 95 QMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEG 154
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRLVY 515
K G L L+ +M G+ + Y +I GLC +G A+ ++ S+ +G C P+ +V+
Sbjct: 155 KIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLL-RSMEQGNCQPNVVVF 213
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
S L + L ++ A+N+F ++
Sbjct: 214 STLIDSLCKDRQVTEAFNIFSEM 236
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 188/400 (47%), Gaps = 9/400 (2%)
Query: 107 LQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSY 166
LQ L G+G D + N N+ V+ V ++G EA+ L + DV SY
Sbjct: 176 LQDLHGRGCALD-VGNCNL-----VLNAVCDQGGSVDEALRLLRDLPTSF-GCDPDVVSY 228
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
N ++K L K + + +++ +M + G P++ T + ++ R G + Q+L ++ D
Sbjct: 229 NAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVD 288
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVE 285
G D VL +C+ H+ A + + M L NV+ YN V+ G + +
Sbjct: 289 HGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQ 348
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
E +L E+ D +TF+ L++ + G + IE+ + M E GC PD Y VI+
Sbjct: 349 AEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVIN 408
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+ G DE + K M++ C PN +YT ++ GL + + DA ++ +M+++G P
Sbjct: 409 GFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSP 468
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
+ T + + LC G A+ + K+ GC L +Y ++ L GK L+L
Sbjct: 469 NPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELL 528
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+ M G + IY + + L G++ N V+ M ++++
Sbjct: 529 NVMVNKGMSPNTIIYSSIASALSKEGRI-NRVIQMFDNIQ 567
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 173/378 (45%), Gaps = 1/378 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V ++N ++ L R F+ + VL+ M G PD+ + V+D + G + A ++L
Sbjct: 259 NVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEIL 318
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
R+ +GLK + N VL LC A L M + +T+NI++ + +
Sbjct: 319 DRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQN 378
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G V + +L++++ G PD +T++ +I G + G ID+A+ + +M GC P+T +Y
Sbjct: 379 GLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISY 438
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
V+ S + + M C PN T+ +I+ L K V A+E+ ++ML
Sbjct: 439 TIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLL 498
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G P + ++ ++ L G A+ + G + Y + LS G+
Sbjct: 499 NGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINR 558
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
++ ++ +Q+ SD +Y VI+ LC G + A+ + + G P+ Y+ L
Sbjct: 559 VIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIR 618
Query: 521 KLLASNKLESAYNLFRKI 538
L + ++ A + ++
Sbjct: 619 GLASEGFVKEAQEMLTEL 636
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 174/376 (46%), Gaps = 6/376 (1%)
Query: 166 YNVIVKALGRRKF---FDFMCNVLSDMAKEGVNPDLETLSIVMDSFI-RAGQVYKAIQML 221
Y+VI++A R F VL D+ G D+ ++V+++ + G V +A+++L
Sbjct: 153 YHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLL 212
Query: 222 GRLE-DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSK 279
L FG D S N VL LC G L M + NV+T+N +I +
Sbjct: 213 RDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCR 272
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G + +VL ++V G +PD ++ +++G+ + G ++ A E+ D M G P+
Sbjct: 273 NGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVC 332
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YN V+ S +++ + M +C + T+ L+ ++ V +E+ E+ML
Sbjct: 333 YNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQML 392
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
+ G VP T T+ + C G A+M+ K GC+ + +Y ++L+ L +
Sbjct: 393 EHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWV 452
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
DL +M E G + + VI LC G +E A+ ++++ L G P + YS +
Sbjct: 453 DAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVI 512
Query: 520 NKLLASNKLESAYNLF 535
+ L + K + A L
Sbjct: 513 DGLGKAGKTDEALELL 528
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 113/284 (39%), Gaps = 50/284 (17%)
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
YN ++SG+ + GQ+ R+ + P++ T+ ++ L GRI DA+ V D M+
Sbjct: 86 YNAMVSGYCRAGQLASARRLAASV---PVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142
Query: 330 EKGCGPDTNAYNAVISNYISV--------------------------------------- 350
+GC P Y+ ++ S
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202
Query: 351 GDFDECMKYYKGM-SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
G DE ++ + + +S+ C+P++ +Y ++ GL +++ ++ EEM+ G P+ T
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
+ + LC G + + GC + Y +L + G + ++ M
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF---CP 510
G + Y V+ GLC+ + E A EE L + F CP
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQA----EELLAEMFDNDCP 362
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 177/378 (46%), Gaps = 1/378 (0%)
Query: 130 DVVGKVVNRGNLSGEAMVLFFNWAIKHP-NVAKDVKSYNVIVKALGRRKFFDFMCNVLSD 188
++V V+ R G + FF++ H D S+++ + R + +++
Sbjct: 57 NLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHR 116
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + P +T +IV + + AG+ KA+++ + + G D S N +L LC+
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 249 VGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
V A LF +++G+ + +TYN++++GW + + + VLKE+V G +P+ T++ +
Sbjct: 177 VEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTM 236
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
++G RAG+I A E F MK++ C D Y V+ + G+ + M
Sbjct: 237 LKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGV 296
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P++ TY +I L K V +A+ +FEEM+ RG P+ T + L G
Sbjct: 297 LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEE 356
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ ++ GC+ + Y +++R S + L L+ +M + + Y +I+G+
Sbjct: 357 LMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMF 416
Query: 489 NIGQLENAVLVMEESLRK 506
+ E+ V+ ++ K
Sbjct: 417 VRKRSEDMVVAGNQAFAK 434
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 114/243 (46%), Gaps = 7/243 (2%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P TF+ + E AG+ D A+++F M E GC D ++N ++ ++ +
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
++ + + TY +++G ++ ALEV +EM++RGI P+ T + L+
Sbjct: 184 FRALRG-RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR 242
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSD 476
G A + + +K C++ + Y ++ GFG G + +++ EM G
Sbjct: 243 AGQIRHAWEFFLEMKKRDCEIDVVTYTTVVH---GFGVAGEIKRARNVFDEMIREGVLPS 299
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
Y +I LC +ENAV++ EE +R+G+ P+ Y+ L L + + L +
Sbjct: 300 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359
Query: 537 KIK 539
+++
Sbjct: 360 RME 362
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 146/327 (44%), Gaps = 6/327 (1%)
Query: 216 KAIQMLGRLEDFGLKF--DAESLNVVLWCLCQRLHVGAAS-SLFNSMKG-KVLFNVMTYN 271
KA+Q L++ ++ DA S ++ + + RLH+ SL + M+ ++ + T+
Sbjct: 72 KALQFFHFLDNHHREYVHDASSFDLAI-DIAARLHLHPTVWSLIHRMRSLRIGPSPKTFA 130
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
IV ++ G+ + ++ + G D +F+ +++ L ++ R++ A E+F ++ +
Sbjct: 131 IVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR 190
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
DT YN +++ + + + ++ K M PN+ TY ++ G ++ ++ A
Sbjct: 191 -FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHA 249
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
E F EM R T T+ + G A ++ + + G S+ Y +++
Sbjct: 250 WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQV 309
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L + ++ EM GY + Y +I GL + G+ +M+ +G P+
Sbjct: 310 LCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 369
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
Y+ + +++E A LF K+
Sbjct: 370 FQTYNMMIRYYSECSEVEKALGLFEKM 396
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 184/385 (47%), Gaps = 5/385 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PN+A ++N +++ L + ++ M EG P++ T +++ + G
Sbjct: 126 QPNIA----TFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTS 181
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
AI++L +E + D ++ LC+ V A +LF+ M + + ++ TYN +I
Sbjct: 182 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLI 241
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
L + + +L E+V P+ + FS +++ L + G++ +A +V D M ++G
Sbjct: 242 HALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVE 301
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ YNA++ + + DE +K + M P++ +Y+ LI+G K +++ A+ +
Sbjct: 302 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 361
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
FEEM + ++P+T T ++ + LC G A+ ++ + G +Y +LL L
Sbjct: 362 FEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCK 421
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+ + L ++ S D +IY VI G+C G+LE A + KG P+
Sbjct: 422 NRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWT 481
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
Y+ + N L L A LF ++K
Sbjct: 482 YTIMINGLCQQGLLAEASKLFGEMK 506
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 176/384 (45%), Gaps = 5/384 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PNV +Y ++ L + +L M + PD+ + ++DS + QV
Sbjct: 161 QPNVV----TYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVT 216
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVI 274
+A + + G+ + N ++ LC ++L N M K++ NV+ ++ V+
Sbjct: 217 QAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVV 276
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
K G+V+E V+ ++ G P+ +T++ L++G +D+A++VFDTM KG
Sbjct: 277 DALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFA 336
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD +Y+ +I+ Y + ++ M ++ M PN TY+ L+ GL ++ DA+ +
Sbjct: 337 PDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIAL 396
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F EM+ RG +P + L+ LC A+ + K + Y +++ +
Sbjct: 397 FHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCR 456
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G+ DL+ + G + Y +I GLC G L A + E RKG+ P+
Sbjct: 457 AGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCT 516
Query: 515 YSKLSNKLLASNKLESAYNLFRKI 538
Y+ ++ L +N+ L +++
Sbjct: 517 YNLITRGFLRNNETLRGIQLLQEM 540
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 180/385 (46%), Gaps = 1/385 (0%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H + + + ++ ++ + K + + ++ M G+ P++ TL+I+++SF ++
Sbjct: 52 HMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLG 111
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVI 274
A +L ++ G + + + N ++ LC +G LF+ M G+ NV+TY +I
Sbjct: 112 FAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLI 171
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G K+G R+L+ + PD + ++ +I+ L + ++ A +F M +G
Sbjct: 172 NGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGIS 231
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P YN++I ++ ++ M + PN+ ++ ++ L K KV +A +V
Sbjct: 232 PSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDV 291
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ M+ RG+ P+ T + ++ C A+ ++ G + +Y L+
Sbjct: 292 VDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCK 351
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+ + L+ EM + Y ++ GLC++G+L++A+ + E + +G P +
Sbjct: 352 IQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVS 411
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
Y L + L + +L+ A L + I+
Sbjct: 412 YCILLDYLCKNRRLDEAIALLKAIE 436
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 164/357 (45%), Gaps = 1/357 (0%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+++ N DV Y I+ +L + + N+ S+M +G++P + T + ++ +
Sbjct: 189 SMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLC 248
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYN 271
+ +L + + + + + V+ LC+ V A + + M K V NV+TYN
Sbjct: 249 EWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYN 308
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
++ G ++ E +V +V +GF+PD +++S LI G + RI+ A+ +F+ M K
Sbjct: 309 ALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRK 368
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
P+T Y+ ++ VG + + + M + P+ +Y L+ L K+R++ +A
Sbjct: 369 ELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEA 428
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+ + + + + P T ++ +C G AA ++ G ++ Y +++
Sbjct: 429 IALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMING 488
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L G L+ EM+ GY +G Y + G + + +++E L +GF
Sbjct: 489 LCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGF 545
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 122/265 (46%), Gaps = 3/265 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V +V +YN ++ R D V M +G PD+ + S +++ + + ++ KA+
Sbjct: 300 VEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAM 359
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
+ + L + + + ++ LC + A +LF+ M +G++ + ++Y I++
Sbjct: 360 YLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIP-DFVSYCILLDY 418
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K ++ E +LK I PD ++ +I+G+ RAG ++ A ++F + KG P+
Sbjct: 419 LCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPN 478
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y +I+ G E K + M PN TY + G L++ + +++ +
Sbjct: 479 VWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQ 538
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYG 421
EML RG T T +E L G
Sbjct: 539 EMLARGFSADVSTSTVLVEMLSDDG 563
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 98/203 (48%), Gaps = 2/203 (0%)
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
++++N S ++ D+ + + M + P++ +T+L+ + K + + L +
Sbjct: 24 SSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSH 83
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+M GI P+ T+ + C A + K K+G + ++ + L+R L G
Sbjct: 84 QMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEG 143
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRLVY 515
K G +L L+ +M G+ + Y +I GLC +G A+ ++ S+ +G C P +VY
Sbjct: 144 KIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLL-RSMEQGNCQPDVVVY 202
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
+ + + L ++ A+NLF ++
Sbjct: 203 TSIIDSLCKDRQVTQAFNLFSEM 225
>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
salt-inducible-like protein from Arabidopsis thaliana
BAC gb|AL021637 [Arabidopsis thaliana]
gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 780
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 193/430 (44%), Gaps = 55/430 (12%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRK-FFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+K + DV +YNVI++ + R + FF V ++M K +P+L T I+MD + G
Sbjct: 153 MKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKG 212
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYN 271
+ A +M + G+ + + +++ LCQR A LF M+ + + + +N
Sbjct: 213 RTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHN 272
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGF--------------------------------- 298
++ G+ KLG++VE +L+ +GF
Sbjct: 273 ALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK 332
Query: 299 --SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
PD + ++ LI+GL +AG+I+DA+++ +M KG PDT YNAVI G +E
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEG 392
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
MS P+ T+T LI + ++ V +A E+F E+ G PS T + ++
Sbjct: 393 RSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDG 452
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG--------KCGMLLDLWHEM 468
LC G K+AR + K+ + L RLS G + G +L + ++
Sbjct: 453 LCKSGE-------LKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDL 505
Query: 469 ---QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
++G D Y +I G C G ++ A+ ++ KG P + Y+ L N L
Sbjct: 506 AHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRV 565
Query: 526 NKLESAYNLF 535
+ E A+ LF
Sbjct: 566 GREEEAFKLF 575
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 208/462 (45%), Gaps = 4/462 (0%)
Query: 99 EERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPN 158
E + G + L K IE AL + LS +++ V+ + ++ + FF WA +
Sbjct: 30 EFNISGEVISILAKKKPIEPALEPLVPFLSKNIITSVI-KDEVNRQLGFRFFIWASRR-E 87
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +S+ +++ L D L ++ GV+ D +++ ++ + G KA+
Sbjct: 88 RLRSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAV 147
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLC-QRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG 276
+ GR+++F + D + NV+L + + + A +++N M K N+ T+ I++ G
Sbjct: 148 ESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDG 207
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K G+ + +++ ++ G SP+ +T++ LI GL + G DDA ++F M+ G PD
Sbjct: 208 LYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPD 267
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+ A+NA++ + +G E + + + Y+ LI GL ++R+ A E++
Sbjct: 268 SVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYA 327
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
ML + I P T ++ L G A+ + G Y +++ L G G
Sbjct: 328 NMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRG 387
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
L EM E+ D + +I +C G + A + E + G PS ++
Sbjct: 388 LLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFN 447
Query: 517 KLSNKLLASNKLESAYNLFRKIKIARQNDYARRLWRSKGWHF 558
L + L S +L+ A L K+++ R RL S F
Sbjct: 448 ALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSF 489
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 193/462 (41%), Gaps = 55/462 (11%)
Query: 98 PEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHP 157
P+ L + +Q L G IEDAL ++ + ++G
Sbjct: 336 PDIILYTILIQGLSKAGKIEDAL---------KLLSSMPSKG------------------ 368
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
++ D YN ++KAL R + ++ +M++ PD T +I++ S R G V +A
Sbjct: 369 -ISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREA 427
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQ------------RLHVGAASSLFN--SMKGKV 263
++ +E G + N ++ LC+ ++ VG +SLF S G
Sbjct: 428 EEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNR 487
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
F+ M + G +++ R L G SPD ++++ LI G RAG ID A++
Sbjct: 488 SFDTMVES---------GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALK 538
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+ + ++ KG PD+ YN +I+ VG +E K + + P + Y L++
Sbjct: 539 LLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV--YRSLMTWSC 596
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
+ RKV A ++ + L + I + +E G A+ + +L+L
Sbjct: 597 RKRKVLVAFNLWMKYLKK-ISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLG 655
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
Y + L L G+ L ++ ++E +I GLC QL+ A+ V +
Sbjct: 656 PYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYT 715
Query: 504 LRKGF-CPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
L F R+ LS+ L ++ K+E L +++ A N
Sbjct: 716 LDNNFKLMPRVCNYLLSSLLESTEKMEIVSQLTNRMERAGYN 757
>gi|225460540|ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61360
[Vitis vinifera]
gi|296081020|emb|CBI18524.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/480 (23%), Positives = 218/480 (45%), Gaps = 22/480 (4%)
Query: 66 SSHNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNV 125
SS S P++ +S + V RI +++ P+ L +Q V + L N V
Sbjct: 29 SSGQSHPSLEIKSEIDRVTRI-----INDHPFPDHPLHSTLIQH-----VPKHLLSNTFV 78
Query: 126 DLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNV 185
+ +V+G++ + +G FF ++++H ++ + L R ++FD +
Sbjct: 79 E---NVLGRLFA-AHSNGFKAFEFFKFSLQHSEFCPSSDAFEKTLHILTRMRYFDKAWEL 134
Query: 186 LSDMAKEGVNPDLETLSI--VMDSFIRAGQVYK-AIQMLGRLED---FGLKFDAESLNVV 239
+ ++ + +P L TL +M S I Q Y+ ++ GR+E FG +F A NV+
Sbjct: 135 MEEIQQ--THPSLLTLKSMSIMLSRIAKFQSYEDTLEAFGRMEKNVFFGREFGANEFNVL 192
Query: 240 LWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS 299
L C + + A S+F+ M + N T NI++ G+ + G V +E E++ GF
Sbjct: 193 LRAFCTQRQMKEARSVFHKMHSRFSPNTKTMNILLLGFKESGDVTAVELFYHEMIRRGFK 252
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P+S+T++ I+ + G D + + + M++ C P +I + +
Sbjct: 253 PNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVAQNISRAREL 312
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ +S N +P++ Y +S L++SR+V AL + +EM + GI + T + L
Sbjct: 313 FNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIGHDSMTYHTMFRGLMR 372
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
+Y K + +L++ + + LDLW + + GY G
Sbjct: 373 SNGIEGVSELYHKMIRRNFVPKTRTIVMLMKWFCQNQQLDLSLDLWGYLIDRGYCPHGHA 432
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ ++ GLC+ G+++ AV +++L +G S V+ L L+ + + E + L + IK
Sbjct: 433 LDLLVTGLCSHGKVKEAVECAKQTLERGRPMSEGVFRMLERYLVEAGEGEMLWKLDQMIK 492
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 175/382 (45%), Gaps = 4/382 (1%)
Query: 149 FFNWAIK-HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
F++A K HP + +Y+ I+ L R + F+ + ++L ++ G+N + V+ S
Sbjct: 71 IFHYAGKYHPAFTHNYDTYHAIIYRLSRARAFEPVESLLLELQDSGINCSEDLFITVIRS 130
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK--VLF 265
+ A + A++ R++ FG++ SLN +L L Q + LF K K V+
Sbjct: 131 YGLASRPKMALKTFLRIQTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSKFGVVP 190
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
NV T NI+I K V +V E+ + G P+ +T++ ++ G G + A VF
Sbjct: 191 NVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVF 250
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ + G PD Y ++ Y+ G F + +K M EPN TY +I G K
Sbjct: 251 GELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKE 310
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
RK +AL + +ML++ +P++ ++ LC G A M++K K C
Sbjct: 311 RKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAIT 370
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ L G L++E E G S Y +IAG+C +G+L A + ++ L
Sbjct: 371 STLIHWLCKEGNIWEARKLFNEF-ERGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLE 429
Query: 506 KGFCPSRLVYSKLSNKLLASNK 527
KG P+ Y+ L L K
Sbjct: 430 KGCVPNEFTYNMLIKGFLKVGK 451
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 141/310 (45%), Gaps = 37/310 (11%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKAL-------GRRKFFDFMCN---------------- 184
L F ++ V +V + N+++KAL G RK FD M +
Sbjct: 177 LLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGG 236
Query: 185 ------------VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
V ++ G PD T +I+MD +++ G+ A++++ +E+ G++ +
Sbjct: 237 YVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPN 296
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLK 291
+ V++ C+ G A +L N M + K + N VI G+V E ++ +
Sbjct: 297 DITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWE 356
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
+++ + +PD+ S LI L + G I +A ++F+ E+G YN +I+ +G
Sbjct: 357 KLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEF-ERGTISSLLTYNTLIAGMCEMG 415
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
+ E + + M C PN TY LI G LK K + ++V EEMLD+G + + T
Sbjct: 416 ELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYL 475
Query: 412 SFLEPLCSYG 421
+E L G
Sbjct: 476 ILVEGLLKLG 485
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 100/193 (51%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y VI+ + + N+L+DM ++ P+ V+D G+V +A +M +L
Sbjct: 299 TYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKL 358
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVV 284
D + ++ LC+ ++ A LFN + + +++TYN +I+G ++G++
Sbjct: 359 LKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEFERGTISSLLTYNTLIAGMCEMGELC 418
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E R+ +++ +G P+ T++ LI+G + G+ + I+V + M +KGC + + Y ++
Sbjct: 419 EAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILV 478
Query: 345 SNYISVGDFDECM 357
+ +G +E +
Sbjct: 479 EGLLKLGKREELL 491
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 189/393 (48%), Gaps = 7/393 (1%)
Query: 149 FFNWAI--KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
F+N I K +++ +V ++N+++KA+ + D V DM PD+ T +MD
Sbjct: 183 FYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMD 242
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVL 264
+A ++ +A+ +L ++ G + NV++ LC++ + A+ L ++M KG +
Sbjct: 243 GLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKG-CI 301
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
N +TYN +I G G++ + +L +V+ P+ +T+ +I GL + GR D V
Sbjct: 302 PNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACV 361
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
M+E+G + Y+ +IS G E M +K M+ E N Y+ +I GL +
Sbjct: 362 LALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCR 421
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
K DA+EV EM ++G P+ T +S ++ G H A+ ++K K +
Sbjct: 422 DGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVC 481
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y +L+ L GK + +W +M G D Y +I GL G +E+A+ + E L
Sbjct: 482 YSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEML 541
Query: 505 RKG--FCPSRLVYSKLSNKLLASNKLESAYNLF 535
+G P + Y+ L N L + + A +L
Sbjct: 542 CQGPDSQPDVVTYNILLNTLCKQSSISRAIDLL 574
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 126/265 (47%), Gaps = 9/265 (3%)
Query: 157 PNVAKDVKSYNVIVKALGRR-KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PNV +Y I+ L ++ + D C VL+ M + G + S ++ + G+
Sbjct: 337 PNVV----TYGTIINGLVKQGRALDGAC-VLALMEERGYCVNEYVYSTLISGLFKEGKSQ 391
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
+A+ + + G + + + V+ LC+ A + + M K N T + ++
Sbjct: 392 EAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLM 451
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ + G V K++ F+ + + +S LI GL + G++ +A+ V+ M KGC
Sbjct: 452 KGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCK 511
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGM--SSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD AY+++I+ G ++ M+ Y M + +P++ TY L++ L K ++ A+
Sbjct: 512 PDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAI 571
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPL 417
++ MLDRG P T T FL L
Sbjct: 572 DLLNSMLDRGCDPDLVTCTIFLRML 596
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 124/311 (39%), Gaps = 39/311 (12%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
T+ +I+ ++ LG +E+VL + E F + + G+A + A+++FD M
Sbjct: 92 TFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFDRM 151
Query: 329 ---------------------------------------KEKGCGPDTNAYNAVISNYIS 349
K P+ +N VI
Sbjct: 152 ACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCK 211
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
VG D+ ++ ++ M+ CEP++ TY L+ GL K+ ++ +A+ + +EM G PS T
Sbjct: 212 VGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVT 271
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
+ LC G A + GC + Y L+ L GK + L M
Sbjct: 272 FNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMV 331
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
S + Y +I GL G+ + V+ +G+C + VYS L + L K +
Sbjct: 332 SSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQ 391
Query: 530 SAYNLFRKIKI 540
A +LF+++ +
Sbjct: 392 EAMHLFKEMTV 402
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 128/283 (45%), Gaps = 25/283 (8%)
Query: 142 SGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
S EAM LF +K + V Y+ ++ L R D VLS+M +G P+ T
Sbjct: 390 SQEAMHLFKEMTVKGYELNTIV--YSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTC 447
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
S +M F AG ++A+++ + + +V++ LC+ V A ++ M G
Sbjct: 448 SSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLG 507
Query: 262 K-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG--FSPDSLTFSFLIEGLGRAGRI 318
K +V+ Y+ +I+G S G V + ++ E++ +G PD +T++ L+ L + I
Sbjct: 508 KGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSI 567
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT---Y 375
AI++ ++M ++GC PD C + + M +P D
Sbjct: 568 SRAIDLLNSMLDRGCDPD----------------LVTCTIFLR-MLREKLDPPQDGREFL 610
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
L+ LLK ++V A ++ E ML + + P T +E LC
Sbjct: 611 DELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLC 653
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 92/251 (36%), Gaps = 46/251 (18%)
Query: 334 GPDTNAYN-------AVISNYISVGDFDECMKYYKGM----------------------- 363
GP +Y ++I+NY ++GDF K M
Sbjct: 80 GPKMGSYRLGDSTFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAH 139
Query: 364 -------------SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR---GIVPST 407
+ C+ ++ +++ +++ ALE + ++ I P+
Sbjct: 140 LPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNV 199
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T ++ +C G A+ +++ C+ + Y L+ L + + L E
Sbjct: 200 LTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDE 259
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
MQ G + +I GLC G L A +++ KG P+ + Y+ L + L K
Sbjct: 260 MQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGK 319
Query: 528 LESAYNLFRKI 538
LE A +L ++
Sbjct: 320 LEKAISLLDRM 330
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 174/378 (46%), Gaps = 3/378 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ A G + + M + GV PDL T +IV+ +F Q KAI +
Sbjct: 227 TYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMM 286
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK---VLFNVMTYNIVISGWSKLG 281
+ + D +LN+V+ CL + G A L NSM+ K +V+TY ++ + G
Sbjct: 287 KGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCG 346
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+V + + V +VAEG P+ ++++ L+ G DA+ +F +K+ G PD +Y
Sbjct: 347 KVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYT 406
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+++ Y G ++ + +K M +C PN+ +Y LI + +A+ + EM
Sbjct: 407 TLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKD 466
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
GI P +I++ L + + A+ G KL++ Y + FG G
Sbjct: 467 GIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKA 526
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+L+ M S D Y +I+GLC +G+ ++ E+ + ++ VYS L
Sbjct: 527 LELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICS 586
Query: 522 LLASNKLESAYNLFRKIK 539
+ KL A + F +K
Sbjct: 587 YVKQGKLTEAESTFSSMK 604
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 179/408 (43%), Gaps = 28/408 (6%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
+ + +KG + D +L++V + + GEA+ L + K DV
Sbjct: 281 AYFEMMKGANIAPDTF-------TLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVV 333
Query: 165 SYNVIVKALGRRKFFDFMCNVLSD-------MAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+Y I+ + ++C + D M EGV P++ + + ++ ++ G A
Sbjct: 334 TYTSIMHSY-------YVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADA 386
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG 276
+ + L+ GL+ D S +L + A F M K N+++YN +I
Sbjct: 387 LGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDA 446
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ G E +L E+ +G PD ++ S L+ GR +I + + K +G +
Sbjct: 447 YGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLN 506
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN+ I +Y++ GD+ + ++ Y M + N P+ TY LISGL K K A++L+ FE
Sbjct: 507 IVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFE 566
Query: 397 EMLDRGIVPSTGTITSFLEPLCSY---GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+M+D I P T + S L +CSY G A + ++ GC + Y ++ +
Sbjct: 567 DMVDLRI-PLTKEVYSSL--ICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYN 623
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
G DL+ EM+ + D I ++ L Q E + +ME
Sbjct: 624 DDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVLQLME 671
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 159/368 (43%), Gaps = 9/368 (2%)
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
V F W N Y ++++ R D + +M + PD + + ++
Sbjct: 139 VHVFRWMKNQENYCARNDIYGMMIRLHARHSQIDQARGLFFEMQEWRCKPDADIYNSLIH 198
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLF 265
+ RAGQ AI ++ + + + N V+ + A L M + V
Sbjct: 199 AHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGP 258
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+++T+NIV+S + Q + + + +PD+ T + +I L + G+ +AIE+
Sbjct: 259 DLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELL 318
Query: 326 DTMKEK--GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
++M+EK C PD Y +++ +Y G ++C + M + +PN+ +Y L+
Sbjct: 319 NSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYA 378
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
ADAL +F+ + G+ P + T+ L G P A +K+ RK C+ ++
Sbjct: 379 SRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIV 438
Query: 444 AYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+Y L + +G GM + L HEM++ G P D ++ Q+ ++
Sbjct: 439 SYNAL---IDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTIL 495
Query: 501 EESLRKGF 508
E + +G
Sbjct: 496 EAAKSRGI 503
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 161/389 (41%), Gaps = 44/389 (11%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PN+ SYN ++ A G F ++L +M K+G+ PD+ ++S ++ + R Q+ K
Sbjct: 435 PNIV----SYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITK 490
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVIS 275
+L + G+K + N + G A L+ M V + +TYNI+IS
Sbjct: 491 IDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILIS 550
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G K+G+ E + +++V +S LI + G++ +A F +MKE GC P
Sbjct: 551 GLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLP 610
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D Y A+I Y G + +K M +P+ + L+ L + + L++
Sbjct: 611 DVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVLQLM 670
Query: 396 EEMLDRGIVP------------------------------------STGTITSFLEPLCS 419
E M ++ I P S GT+ L L
Sbjct: 671 ELMKEKCI-PLNQKAYFEIIASCSMLRDWKTASEIIEHLDSSLSSISVGTLNHLLTFLGK 729
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
G M ++ K + ++ Y +LLR L GK +++ M+++G +
Sbjct: 730 CGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNLLAVGKWRKYIEVLQWMEDAGVSPTLYM 789
Query: 480 YEYVIAGLCNIGQLENAVLVMEE--SLRK 506
Y+ V+ + ++ L+ E+ SLR+
Sbjct: 790 YQNVLPYIWRDNSMDYVTLMQEKINSLRE 818
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 119/273 (43%), Gaps = 4/273 (1%)
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
YN +I ++ GQ ++ +++ P T++ +I G AG A+E+ M
Sbjct: 193 YNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMT 252
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
G GPD +N V+S + + + + + Y++ M N P+ T +I L+K +
Sbjct: 253 RNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYG 312
Query: 390 DALEVFEEMLDR--GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+A+E+ M ++ P T TS + G ++ G K ++ +Y
Sbjct: 313 EAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNA 372
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
LL + G L ++ ++++G D Y ++ GQ E A +E +RK
Sbjct: 373 LLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKE-MRKN 431
Query: 508 FC-PSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
C P+ + Y+ L + ++ + A +L +++
Sbjct: 432 SCRPNIVSYNALIDAYGSAGMFKEAISLLHEME 464
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 113/275 (41%), Gaps = 8/275 (2%)
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
Y ++I ++ Q+ + + E+ PD+ ++ LI RAG+ AI + D M
Sbjct: 158 YGMMIRLHARHSQIDQARGLFFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDML 217
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
P YN VI+ + G++ + ++ K M+ P++ T+ ++S + +
Sbjct: 218 RAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYS 277
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR--KVGCKLSLTAYKL 447
A+ FE M I P T T+ + L G A+ + R + C + Y
Sbjct: 278 KAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTYTS 337
Query: 448 LLRRLSGFGK---CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
++ GK C + D+ M G + Y ++ + G +A+ + +
Sbjct: 338 IMHSYYVCGKVEDCKAVFDM---MVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLK 394
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ G P + Y+ L N S + E A F++++
Sbjct: 395 QNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMR 429
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 185/425 (43%), Gaps = 43/425 (10%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+ H V +K N++++AL +D M +V ++M + G+ P + T + ++DSF R G+
Sbjct: 187 MAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGR 246
Query: 214 VYKAIQMLGRLE--DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-----GKVLFN 266
V +A ++L +E G + NVV+ L ++ + A+ L + M+ FN
Sbjct: 247 VDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAFTFN 306
Query: 267 ------------------------------VMTYNIVISGWSKLGQVVEMERVLKEIVAE 296
V+TYN +I G + G V E+ A
Sbjct: 307 PLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAM 366
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
G PD +T++ LI G +AG + +A+ +F +K G P YN ++ Y +GD +E
Sbjct: 367 GLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEA 426
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
++ + M C+P++ TYT L++G K R +A E F+EML +G+ P + +
Sbjct: 427 RRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISA 486
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGY 473
G A + + G Y + L G K G L D LW +M G
Sbjct: 487 ELILGSTSEAFQLTEVMISRGISSDTVTYNIF---LDGLCKSGNLKDAYVLWMKMVSDGL 543
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
D Y +I C G+L A + + L G PS + Y+ + L SAY
Sbjct: 544 QPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYG 603
Query: 534 LFRKI 538
F+K+
Sbjct: 604 WFQKM 608
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 163/367 (44%), Gaps = 36/367 (9%)
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
+M EG+ P + T + ++ R+G V A + GL D + N ++ C+
Sbjct: 327 EMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAG 386
Query: 248 HVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
++ A LF +K L +V+TYNI++ G+ +LG + E R +E+V +G PD T++
Sbjct: 387 NLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYT 446
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY-----K 361
L+ G + + E FD M KG PD AYN IS + +G E + +
Sbjct: 447 ILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISR 506
Query: 362 GMSS----YNC--------------------------EPNMDTYTRLISGLLKSRKVADA 391
G+SS YN +P+ TYT LI + ++ +A
Sbjct: 507 GISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREA 566
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
++F+ ML G+ PS T T F+ C G ++A ++K + G + + Y +L+
Sbjct: 567 RDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHA 626
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L G+ + +HEM E G + Y +I G C G E A+ + E + G P
Sbjct: 627 LCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPD 686
Query: 512 RLVYSKL 518
++ L
Sbjct: 687 HCTHNAL 693
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 168/375 (44%), Gaps = 2/375 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YNV++ L R+ + L D + T + ++ + G V KA + +
Sbjct: 270 TYNVVINGLARKGELEKAAQ-LVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQLEM 328
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQV 283
E+ G+ + N ++ + + +V AA F M+ +L +++TYN +I+G+ K G +
Sbjct: 329 ENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNL 388
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E + ++ G +P LT++ L++G R G +++A M E+GC PD + Y +
Sbjct: 389 KEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTIL 448
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
++ V + +++ M S +P+ Y IS L ++A ++ E M+ RGI
Sbjct: 449 MNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGI 508
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
T T FL+ LC G A +++ K G + Y L+ G+ D
Sbjct: 509 SSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARD 568
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
++ M SG P Y I C G L +A ++ L +G P+ + Y+ L + L
Sbjct: 569 IFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALC 628
Query: 524 ASNKLESAYNLFRKI 538
+ AY F ++
Sbjct: 629 RMGRTNLAYQHFHEM 643
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 1/249 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y +++ + + + +M +G+ PD + + + + G +A Q+
Sbjct: 441 DVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLT 500
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
+ G+ D + N+ L LC+ ++ A L+ M L + +TY +I +
Sbjct: 501 EVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCER 560
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ E + ++ G P ++T++ I R G + A F M E+G P+ Y
Sbjct: 561 GRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTY 620
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I +G + +++ M PN TYT LI G K +A+ ++ EM
Sbjct: 621 NVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQ 680
Query: 401 RGIVPSTGT 409
GI P T
Sbjct: 681 HGIHPDHCT 689
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 107/271 (39%), Gaps = 42/271 (15%)
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
+E+ G P + ++ L R DD V+ M + G P YN ++ ++
Sbjct: 183 AFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFF 242
Query: 349 SVGDFDECMKYYKGMSSY--NCEPNMDTYTRLISGLLKSRKVADALEVFE---------- 396
G D+ K + M + C P+ TY +I+GL + ++ A ++ +
Sbjct: 243 REGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASA 302
Query: 397 ------------------------EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
EM + GIVP+ T + + + G AA M + +
Sbjct: 303 FTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVE 362
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCN 489
R +G L Y L ++G+ K G L L L+ +++ +G Y ++ G C
Sbjct: 363 MRAMGLLPDLITYNSL---INGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCR 419
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+G LE A +E + +G P Y+ L N
Sbjct: 420 LGDLEEARRFKQEMVEQGCQPDVSTYTILMN 450
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 81/222 (36%), Gaps = 3/222 (1%)
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+ F M G P N V+ +D+ Y M EP++ TY L+
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240
Query: 382 LLKSRKVADALEVFEEMLDR--GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
+ +V A ++ EM R G +PS T + L G A + + R + K
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMR-MSKK 299
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
S + L+ G L EM+ G Y +I G+ G +E A +
Sbjct: 300 ASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMK 359
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
E G P + Y+ L N + L+ A LF +K A
Sbjct: 360 FVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRA 401
>gi|147789025|emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera]
Length = 515
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/480 (23%), Positives = 218/480 (45%), Gaps = 22/480 (4%)
Query: 66 SSHNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNV 125
SS S P++ +S + V RI +++ P+ L +Q V + L N V
Sbjct: 29 SSGQSHPSLEIKSEIDRVTRI-----INDHPFPDHPLHSTLIQH-----VPKHLLSNTFV 78
Query: 126 DLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNV 185
+ +V+G++ + +G FF ++++H ++ + L R ++FD +
Sbjct: 79 E---NVLGRLFA-AHSNGFKAFEFFKFSLQHSEFCPSSDAFEKTLHILTRMRYFDKAWEL 134
Query: 186 LSDMAKEGVNPDLETLSI--VMDSFIRAGQVYK-AIQMLGRLED---FGLKFDAESLNVV 239
+ ++ + +P L TL +M S I Q Y+ ++ GR+E FG +F A NV+
Sbjct: 135 MEEIQQ--THPSLLTLKSMSIMLSRIAKFQSYEDTLEAFGRMEKNVFFGREFGANEFNVL 192
Query: 240 LWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS 299
L C + + A S+F+ M + N T NI++ G+ + G V +E E++ GF
Sbjct: 193 LRAFCTQRQMKEARSVFHKMHSRFSPNTKTMNILLLGFKESGDVTAVELFYHEMIRRGFK 252
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P+S+T++ I+ + G D + + + M++ C P +I + +
Sbjct: 253 PNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVAQNISRAREL 312
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ +S N +P++ Y +S L++SR+V AL + +EM + GI + T + L
Sbjct: 313 FNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIGHDSMTYHTMFRGLMR 372
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
+Y K + +L++ + + LDLW + + GY G
Sbjct: 373 SNGIEGVSELYHKMIRRNFVPKTRTIVMLMKWFCQNQQLDLSLDLWGYLIDRGYCPHGHA 432
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ ++ GLC+ G+++ AV +++L +G S V+ L L+ + + E + L + IK
Sbjct: 433 LDLLVTGLCSHGKVKEAVECAKQTLERGRPMSEGVFRMLERYLVEAGEGEMLWKLDQMIK 492
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 184/385 (47%), Gaps = 5/385 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PN+A ++N +++ L + ++ M EG P++ T +++ + G
Sbjct: 135 QPNIA----TFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTS 190
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
AI++L +E + D ++ LC+ V A +LF+ M + + ++ TYN +I
Sbjct: 191 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLI 250
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
L + + +L E+V P+ + FS +++ L + G++ +A +V D M ++G
Sbjct: 251 HALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVE 310
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ YNA++ + + DE +K + M P++ +Y+ LI+G K +++ A+ +
Sbjct: 311 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 370
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
FEEM + ++P+T T ++ + LC G A+ ++ + G +Y +LL L
Sbjct: 371 FEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCK 430
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+ + L ++ S D +IY VI G+C G+LE A + KG P+
Sbjct: 431 NRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWT 490
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
Y+ + N L L A LF ++K
Sbjct: 491 YTIMINGLCQQGLLAEASKLFGEMK 515
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 176/384 (45%), Gaps = 5/384 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PNV +Y ++ L + +L M + PD+ + ++DS + QV
Sbjct: 170 QPNVV----TYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVT 225
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVI 274
+A + + G+ + N ++ LC ++L N M K++ NV+ ++ V+
Sbjct: 226 QAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVV 285
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
K G+V+E V+ ++ G P+ +T++ L++G +D+A++VFDTM KG
Sbjct: 286 DALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFA 345
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD +Y+ +I+ Y + ++ M ++ M PN TY+ L+ GL ++ DA+ +
Sbjct: 346 PDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIAL 405
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F EM+ RG +P + L+ LC A+ + K + Y +++ +
Sbjct: 406 FHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCR 465
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G+ DL+ + G + Y +I GLC G L A + E RKG+ P+
Sbjct: 466 AGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCT 525
Query: 515 YSKLSNKLLASNKLESAYNLFRKI 538
Y+ ++ L +N+ L +++
Sbjct: 526 YNLITRGFLRNNETLRGIQLLQEM 549
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 180/385 (46%), Gaps = 1/385 (0%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H + + + ++ ++ + K + + ++ M G+ P++ TL+I+++SF ++
Sbjct: 61 HMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLG 120
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVI 274
A +L ++ G + + + N ++ LC +G LF+ M G+ NV+TY +I
Sbjct: 121 FAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLI 180
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G K+G R+L+ + PD + ++ +I+ L + ++ A +F M +G
Sbjct: 181 NGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGIS 240
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P YN++I ++ ++ M + PN+ ++ ++ L K KV +A +V
Sbjct: 241 PSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDV 300
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ M+ RG+ P+ T + ++ C A+ ++ G + +Y L+
Sbjct: 301 VDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCK 360
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+ + L+ EM + Y ++ GLC++G+L++A+ + E + +G P +
Sbjct: 361 IQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVS 420
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
Y L + L + +L+ A L + I+
Sbjct: 421 YCILLDYLCKNRRLDEAIALLKAIE 445
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 164/357 (45%), Gaps = 1/357 (0%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+++ N DV Y I+ +L + + N+ S+M +G++P + T + ++ +
Sbjct: 198 SMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLC 257
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYN 271
+ +L + + + + + V+ LC+ V A + + M K V NV+TYN
Sbjct: 258 EWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYN 317
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
++ G ++ E +V +V +GF+PD +++S LI G + RI+ A+ +F+ M K
Sbjct: 318 ALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRK 377
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
P+T Y+ ++ VG + + + M + P+ +Y L+ L K+R++ +A
Sbjct: 378 ELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEA 437
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+ + + + + P T ++ +C G AA ++ G ++ Y +++
Sbjct: 438 IALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMING 497
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L G L+ EM+ GY +G Y + G + + +++E L +GF
Sbjct: 498 LCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGF 554
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 122/265 (46%), Gaps = 3/265 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V +V +YN ++ R D V M +G PD+ + S +++ + + ++ KA+
Sbjct: 309 VEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAM 368
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
+ + L + + + ++ LC + A +LF+ M +G++ + ++Y I++
Sbjct: 369 YLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIP-DFVSYCILLDY 427
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K ++ E +LK I PD ++ +I+G+ RAG ++ A ++F + KG P+
Sbjct: 428 LCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPN 487
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y +I+ G E K + M PN TY + G L++ + +++ +
Sbjct: 488 VWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQ 547
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYG 421
EML RG T T +E L G
Sbjct: 548 EMLARGFSADVSTSTVLVEMLSDDG 572
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 98/203 (48%), Gaps = 2/203 (0%)
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
++++N S ++ D+ + + M + P++ +T+L+ + K + + L +
Sbjct: 33 SSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSH 92
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+M GI P+ T+ + C A + K K+G + ++ + L+R L G
Sbjct: 93 QMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEG 152
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRLVY 515
K G +L L+ +M G+ + Y +I GLC +G A+ ++ S+ +G C P +VY
Sbjct: 153 KIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLL-RSMEQGNCQPDVVVY 211
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
+ + + L ++ A+NLF ++
Sbjct: 212 TSIIDSLCKDRQVTQAFNLFSEM 234
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 182/395 (46%), Gaps = 14/395 (3%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N+ DV +Y +++ L + + +M G+ P+ SIV+ +A +++ A
Sbjct: 193 NLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDA 252
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG 276
++ ++ G D + NV+L C+ ++ A +L + K + V+ Y +I+G
Sbjct: 253 QRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLING 312
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ + E ++++ E PD + ++ +I GL + GR+ +A+ + M E+G PD
Sbjct: 313 LFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPD 372
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
T YNA+I + +G DE +S ++C PN TY+ LI G+ K+ + A +F+
Sbjct: 373 TICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFK 432
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK---ARKVGCKLSLT---------- 443
EM G +PS T S + LC A +++ + RK L L+
Sbjct: 433 EMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIA 492
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
+ ++++ RL G L ++ +SG D Y +I G C G + A + +E
Sbjct: 493 SLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEM 552
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
KG P + Y L + L + + E A +F ++
Sbjct: 553 QLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQM 587
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 188/404 (46%), Gaps = 4/404 (0%)
Query: 149 FFNWAIKHPNV-AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
F W++K ++ + V+ ++I+ L + F+ VL ++ + E S+++++
Sbjct: 80 LFIWSLKSWHLRCRTVQ--DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEA 137
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFN 266
+ AG KA++ G + DF K D + N++L L ++ A +++N M K + +
Sbjct: 138 YSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPD 197
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V+TY I+I G K + + + E+ G P+ + +S ++ GL +A +I DA +F
Sbjct: 198 VVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFS 257
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M+ GC D YN +++ + G D+ + ++ + Y LI+GL ++R
Sbjct: 258 KMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRAR 317
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+ +A +++ML I P T + L G A+ + + + G + Y
Sbjct: 318 RYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYN 377
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L++ G L E+ + + Y +I G+C G + A + +E +
Sbjct: 378 ALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKL 437
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYARRL 550
G PS + ++ L N L +N+LE A LF +++I R+ RL
Sbjct: 438 GCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRL 481
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 163/358 (45%), Gaps = 50/358 (13%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y++++ + + + ++ +M K G P + T + +++ +A ++ +A + ++
Sbjct: 410 TYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM 469
Query: 225 E-----DFGLK--------FDAESLNVVLWCLCQR-LHVGAASSLFNSMKGKVLFNVMTY 270
E L+ FD SL V++ LC+ + + A L + VL ++ TY
Sbjct: 470 EIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTY 529
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
NI+I+G+ K G + ++ KE+ +G PDS+T+ LI+GL RAGR +DA+E+F+ M +
Sbjct: 530 NILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVK 589
Query: 331 KGCGPDTNAYNAVIS-----NYISVGDFDECMKYYKGMSSYNCEP--------------- 370
KGC P+++ Y +++ N IS+ MKY + + E
Sbjct: 590 KGCVPESSTYKTIMTWSCRENNISLA-LSVWMKYLRDFRGWEDEKVRVVAESFDNEELQT 648
Query: 371 ---------------NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
++ YT + GL+++++ +A +F + D + S+ + +
Sbjct: 649 AIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIG 708
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
LC AM ++ + G +L LL L + L L + M+ SGY
Sbjct: 709 RLCMVENLDMAMDVFLFTLERGFRLMPPICNQLLCNLLHLDRKDDALFLANRMEASGY 766
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 183/382 (47%), Gaps = 1/382 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D+ ++N+++ +VL M K G PD T+ +++ F R +V A+
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ ++ + G + D + N ++ LC+ V A F + K + NV+TY +++G
Sbjct: 176 SLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGL 235
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
G+ + R+L++++ +P+ +T+S L++ + G++ +A E+F+ M PD
Sbjct: 236 CNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDI 295
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y+++I+ DE + + M S C P++ +Y LI+G K+++V D +++F +
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRK 355
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M RG+V +T T + ++ G A + + G + Y +LL L G
Sbjct: 356 MSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGL 415
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L ++ +MQ+S D Y VI G+C G++E+A + KG P + Y+
Sbjct: 416 LEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTT 475
Query: 518 LSNKLLASNKLESAYNLFRKIK 539
+ + L L+ K+K
Sbjct: 476 MMSGLCTKGLQHEVEALYTKMK 497
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 182/374 (48%), Gaps = 1/374 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ +N ++ A+ + K +D + ++ M G+ DL T +IV++ F QV A+ +LG
Sbjct: 85 IVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLG 144
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLG 281
++ G + D ++ ++ C+R V A SL + M + +++ YN +I K
Sbjct: 145 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTR 204
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+V + KEI +G P+ +T++ L+ GL +GR +DA + M ++ P+ Y+
Sbjct: 205 RVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYS 264
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A++ ++ G E + ++ M + +P++ TY+ LI+GL ++ +A ++F+ M+ +
Sbjct: 265 ALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G P + + + C M +++K + G + Y L++ G
Sbjct: 325 GCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKA 384
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+ + +M G D Y ++ GLC+ G LE A+++ E+ + + Y+ +
Sbjct: 385 QEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQG 444
Query: 522 LLASNKLESAYNLF 535
+ + K+E A+ LF
Sbjct: 445 MCKTGKVEDAWGLF 458
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 170/360 (47%), Gaps = 7/360 (1%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
N+ +M K P + + ++ + ++ + I + ++E G++ D + N+V+ C
Sbjct: 71 NLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 130
Query: 244 CQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C V A S+ M K + +T +++G+ + +V + ++ ++V G+ PD
Sbjct: 131 CCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDI 190
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+ ++ +I+ L + R++DA++ F + KG P+ Y A+++ + G +++ + +
Sbjct: 191 VAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRD 250
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M PN+ TY+ L+ +K+ KV +A E+FEEM+ I P T +S + LC +
Sbjct: 251 MIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEI 479
A M+ GC + +Y L ++GF K + D L+ +M + G ++
Sbjct: 311 IDEANQMFDLMVSKGCFPDVVSYNTL---INGFCKAKRVEDGMKLFRKMSQRGLVNNTVT 367
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y +I G +G ++ A + G P Y+ L L + LE A +F ++
Sbjct: 368 YNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQ 427
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 101/225 (44%)
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
R ++ DAI +F M + P +N ++S + + +D + K M ++
Sbjct: 62 RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY 121
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
T+ +I+ +V+ AL V +ML G P TI S + C A+ + K
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
++G + + AY ++ L + LD + E+ G + Y ++ GLCN G+
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+A ++ + +++ P+ + YS L + + + K+ A +F ++
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEM 286
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 73/166 (43%)
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
D RL L+ K+ DA+ +F EM+ PS L + + + KK
Sbjct: 51 DLRERLSKTRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKK 110
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+G + L + +++ + + L + +M + GY D ++ G C +
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ +AV ++++ + G+ P + Y+ + + L + ++ A + F++I
Sbjct: 171 VSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEI 216
>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 164/349 (46%), Gaps = 3/349 (0%)
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
EGV P+ T + + A QV A L L G + N V+ C V
Sbjct: 242 EGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHK 301
Query: 252 ASSLFNSMKGKVLF--NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A +F+ MK K F +V +Y+I++ G K G V+ +L E+ G +P+ +++S L+
Sbjct: 302 AIEVFDGMK-KCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLL 360
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
GL RAGR++ A E+F +K++G D Y+ V+ D + C + M +N
Sbjct: 361 HGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFV 420
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P+ Y+ LI + R++ +ALEVFE M+ GI P+ T T + + G A +
Sbjct: 421 PDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLF 480
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
K R+ G SL Y++++ L K + ++ +M + GY D +Y +I G
Sbjct: 481 LDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVK 540
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
L+ A + + + +G P+ Y+ L N L +KL LF+ +
Sbjct: 541 ALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHM 589
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 167/367 (45%), Gaps = 1/367 (0%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+K DV SY+++V L ++ +L +MA+ G+ P+L + S ++ RAG
Sbjct: 308 GMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAG 367
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYN 271
+V A ++ RL+D G K D ++VL CQ L + L+N M + + Y+
Sbjct: 368 RVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYS 427
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I + + Q+ E V + +V++G P+ +T + L+ G G I +A D +++
Sbjct: 428 SLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQF 487
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G P Y +I V ++ + M P+ Y+ +I G +K+ + +A
Sbjct: 488 GVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEA 547
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
++ +M+D G P+ T TS + LC M ++K G Y L+
Sbjct: 548 FRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIAC 607
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L+++ EM+ G +D +Y +I G + ++ A L MEE + KG P+
Sbjct: 608 YCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPT 667
Query: 512 RLVYSKL 518
+ Y+ L
Sbjct: 668 VVTYTDL 674
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 114/267 (42%), Gaps = 36/267 (13%)
Query: 141 LSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
L GEA LF + ++ V + +Y VI+ L + + M + +DM K G PD
Sbjct: 473 LIGEAF-LFLD-KVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVL 530
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
SI++D F++A + +A ++ ++ D G K
Sbjct: 531 YSIIIDGFVKALDLQEAFRLYYKMVDEGTK------------------------------ 560
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
N+ TY +I+G ++ E+ + K ++ EG +PD + ++ LI + +
Sbjct: 561 ----PNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKA 616
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A+E+F M+ +G D+ Y +I + V D + + M + P + TYT LI
Sbjct: 617 ALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIV 676
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPST 407
G K A+ ++ ML GI P
Sbjct: 677 GYFKIGDEKKAMAMYNSMLQAGIAPDA 703
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 90/236 (38%), Gaps = 37/236 (15%)
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+FL++ L +I A +FD MK G P+ +Y+ ++S Y
Sbjct: 180 NFLLKRLVEGNQIMYARSLFDDMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEM 239
Query: 366 Y--NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
PN TY + GL +++V A + + RG + + + C G
Sbjct: 240 EVEGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQV 299
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
H A+ ++ G KCG + D+ Y +
Sbjct: 300 HKAIEVF----------------------DGMKKCGFVPDV-------------HSYSIL 324
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ GLC G + ++ E R G P+ + YS L + L + ++E A+ LF+++K
Sbjct: 325 VDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLK 380
>gi|242062226|ref|XP_002452402.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
gi|241932233|gb|EES05378.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
Length = 506
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 198/407 (48%), Gaps = 10/407 (2%)
Query: 113 KGVIEDALWNV-----NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAI-KHPNVAKDVKSY 166
KG +ED + + V L+ V ++ R ++ + FF WA + + +
Sbjct: 66 KGSVEDLVRTLAAECSEVRLTSGVADSLLRRCGDDWKSALGFFLWAQSRGGGYSHTPCAC 125
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
N +V LG+ + D M ++LS+M G+ ++T++ + A + AI + +LED
Sbjct: 126 NRMVDLLGKMRQIDRMWDLLSEMHCRGL-VTVDTIAKSIRRLAAARRWRDAILLFDQLED 184
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEM 286
GL+ + E++NV+L LC+ V A +F + + + T+NI + GW + ++ E
Sbjct: 185 LGLERNTETMNVLLDALCKERKVELAREVFVMLSPHIAPDAYTFNIFVHGWCSVRRIDEA 244
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
++E+ GF P +T++ ++E + E+ D+M +GC P+ Y ++++
Sbjct: 245 MWTIEEMKNRGFPPIVITYTAVLEAYCKQRNFRRVYEILDSMSSQGCHPNVITYTMIMTS 304
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP- 405
F+E + M S C+P+ Y LI+ L ++ + +A +VF + R +VP
Sbjct: 305 LTKCERFEEALSVSDRMKSSGCKPDTLFYNALINLLGRAGHLFEANQVFRVEMPRNVVPR 364
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG-FGKCGMLLDL 464
+ T + + LC YG A+ + K+ CK L Y+ LLR L G G+ G + L
Sbjct: 365 NVATYNTMISILCQYGRDDDALDVLKEMEAQSCKPDLQTYQPLLRLLFGRRGQTGAIHHL 424
Query: 465 WHEMQE-SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
E+++ +G D + Y +I GLC +G+ + A + +E + P
Sbjct: 425 LSELRDRNGLGLDLDTYTLLIHGLCRVGETDWAYQLYDEMVGSEIVP 471
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 12/260 (4%)
Query: 152 WAI---KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
W I K+ V +Y +++A +++ F + +L M+ +G +P++ T +++M S
Sbjct: 246 WTIEEMKNRGFPPIVITYTAVLEAYCKQRNFRRVYEILDSMSSQGCHPNVITYTMIMTSL 305
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF--NSMKGKVLFN 266
+ + +A+ + R++ G K D N ++ L + H+ A+ +F + V N
Sbjct: 306 TKCERFEEALSVSDRMKSSGCKPDTLFYNALINLLGRAGHLFEANQVFRVEMPRNVVPRN 365
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL-GRAGRIDDAIEVF 325
V TYN +IS + G+ + VLKE+ A+ PD T+ L+ L GR G+ +
Sbjct: 366 VATYNTMISILCQYGRDDDALDVLKEMEAQSCKPDLQTYQPLLRLLFGRRGQTGAIHHLL 425
Query: 326 DTMKEK-GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
++++ G G D + Y +I VG+ D + Y M P T LL
Sbjct: 426 SELRDRNGLGLDLDTYTLLIHGLCRVGETDWAYQLYDEMVGSEIVPRPKT-----CELLL 480
Query: 385 SRKVADALEVFEEMLDRGIV 404
S +EV+ E + ++
Sbjct: 481 SETQRQNMEVYVERIQNDVI 500
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 93/241 (38%), Gaps = 4/241 (1%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG-CGPDTNAYNAVISNYISVGDFDE 355
G+S + +++ LG+ +ID ++ M +G DT A + I + + +
Sbjct: 117 GYSHTPCACNRMVDLLGKMRQIDRMWDLLSEMHCRGLVTVDTIAKS--IRRLAAARRWRD 174
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+ + + E N +T L+ L K RKV A EVF ML I P T F+
Sbjct: 175 AILLFDQLEDLGLERNTETMNVLLDALCKERKVELAREVFV-MLSPHIAPDAYTFNIFVH 233
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
CS AM ++ + G + Y +L + ++ M G
Sbjct: 234 GWCSVRRIDEAMWTIEEMKNRGFPPIVITYTAVLEAYCKQRNFRRVYEILDSMSSQGCHP 293
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ Y ++ L + E A+ V + G P L Y+ L N L + L A +F
Sbjct: 294 NVITYTMIMTSLTKCERFEEALSVSDRMKSSGCKPDTLFYNALINLLGRAGHLFEANQVF 353
Query: 536 R 536
R
Sbjct: 354 R 354
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 180/386 (46%), Gaps = 8/386 (2%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
R N+ G ++ N ++ V +V +YN++V+AL + +L +MA +G PD
Sbjct: 146 RENMVGAVALVCGN--MRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPD 203
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
T ++ + G+V +A ++L A S N V+ LC+ + ++
Sbjct: 204 DVTYGTIVSALCTLGRVDEATEVLSAAPPV-----AASYNAVILALCREFRMQEVFAVVG 258
Query: 258 SMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
M G+ L NV+TY +++ + K G++ +L +V G +P+ TF+ L+ GL G
Sbjct: 259 DMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDG 318
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
R+ DA++++ M +G P T +YN +I SVGD M + C PN TY+
Sbjct: 319 RVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYS 378
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
LI G K+ + A+ ++ +M G P+ T+ + C + A + K
Sbjct: 379 TLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVE 438
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
C + + L+R L + G L ++HEM+ G P +G Y ++ GL G +A
Sbjct: 439 NCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDA 498
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKL 522
+ ++ E G S + Y+ + + L
Sbjct: 499 LQMVIEMQNHGIELSLVTYNTVVSGL 524
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 152/340 (44%), Gaps = 12/340 (3%)
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
++D+ +R V + G + G++ + + N+++ LCQ VGAA + + M K
Sbjct: 140 LIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKG 199
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ +TY ++S LG+V E VL P + +++ +I L R R+ +
Sbjct: 200 CPPDDVTYGTIVSALCTLGRVDEATEVLSAA-----PPVAASYNAVILALCREFRMQEVF 254
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
V M +G P+ Y +++ + G+ M C PN+ T+T L+ GL
Sbjct: 255 AVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGL 314
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+V DAL++++ M+ G PST + + LCS G A + + GC +
Sbjct: 315 FNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNA 374
Query: 443 TAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
Y L + GF K G L + +W++M SG + +Y ++ C A +
Sbjct: 375 RTYSTL---IDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESL 431
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+++ L + P+ + ++ L L ++ A +F +++
Sbjct: 432 IDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMR 471
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 158/352 (44%), Gaps = 12/352 (3%)
Query: 186 LSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR-LEDFGL-KFDAESL-NVVLWC 242
L +M GV L + +F RAG +A++ R + D G + A L N ++
Sbjct: 84 LQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTAPRLYNHLIDA 143
Query: 243 LCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
L + VGA + + +M K V NV TYN+++ + +V ++L E+ +G PD
Sbjct: 144 LLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPD 203
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+T+ ++ L GR+D+A EV P +YNAVI E
Sbjct: 204 DVTYGTIVSALCTLGRVDEATEVLSAAP-----PVAASYNAVILALCREFRMQEVFAVVG 258
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M +PN+ TYT +++ K+ ++ A + M+ G P+ T T+ + L + G
Sbjct: 259 DMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDG 318
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
H A+ M+K G S +Y +L+R L G + ++M++ G + Y
Sbjct: 319 RVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYS 378
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN---KLLASNKLES 530
+I G G L+ A+ + + R G P+ +VY+ + K L N+ ES
Sbjct: 379 TLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAES 430
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 139/327 (42%), Gaps = 36/327 (11%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V +Y IV A + C +L+ M G P++ T + ++ G+V+ A+ M
Sbjct: 268 NVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMW 327
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
+ G S NV++ LC + ASS+ N M+ F N TY+ +I G+SK
Sbjct: 328 KCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKA 387
Query: 281 G-------------------QVV----------------EMERVLKEIVAEGFSPDSLTF 305
G VV + E ++ +++ E P+++TF
Sbjct: 388 GDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTF 447
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LI L R+ A+ VF M+ GC P+ YN ++ G+ + ++ M +
Sbjct: 448 NTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQN 507
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
+ E ++ TY ++SGL + R +A+ M+ RGI P T T+ + C G
Sbjct: 508 HGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRM 567
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRL 452
A + V C ++ Y +L+ L
Sbjct: 568 AAWILGAMNVVNCGRNILVYTILMAEL 594
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 115/286 (40%), Gaps = 36/286 (12%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A SYNV+++ L +VL+DM + G P+ T S ++D F +AG + AI
Sbjct: 336 APSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAIS 395
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWS 278
+ + G K + ++ C++L A SL + M N +T+N +I
Sbjct: 396 IWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLC 455
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE-------- 330
+V V E+ G P+ T++ L+ GL R G DA+++ M+
Sbjct: 456 NCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLV 515
Query: 331 ---------------------------KGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
+G PD + A+I Y G+ M
Sbjct: 516 TYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAM 575
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
+ NC N+ YT L++ L K+ DA+ +ML GI P+T T
Sbjct: 576 NVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVT 621
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 181/380 (47%), Gaps = 2/380 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D ++ +V L + ++ M +G PDL T V++ + G+ A+ +L
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++E ++ D N ++ LC+ H+ A LFN M+ K + +V TYN +IS
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM-KEKGCGPDTNA 339
G+ + R+L +++ + +PD + F+ LI+ + G++ +A +++D M K K C PD A
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YN +I + +E M+ ++ MS N TYT LI G ++R +A VF++M+
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
G+ P T L+ LC+ G A+++++ +K KL + Y ++ L GK
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
DL+ + G + Y +++G C G E A + E G P+ Y+ L
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Query: 520 NKLLASNKLESAYNLFRKIK 539
L ++ L ++++
Sbjct: 539 RARLRDGDEAASAELIKEMR 558
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 155/353 (43%), Gaps = 37/353 (10%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
++ M + G PD T + ++ + + +A+ ++ R+ G + D + V+ LC
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 226
Query: 245 QRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+R A +L N M KGK+ +V+ YN +I G K + + + ++ +G PD
Sbjct: 227 KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T++ LI L GR DA + M EK PD +NA+I ++ G E K Y M
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Query: 364 -SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
S +C P++ Y LI G K ++V + +EVF EM RG+V +T T T+ +
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A M++K +M G D Y
Sbjct: 407 CDNAQMVFK-----------------------------------QMVSDGVHPDIMTYNI 431
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
++ GLCN G +E A++V E ++ + Y+ + L + K+E ++LF
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF 484
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 170/396 (42%), Gaps = 37/396 (9%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF + P + ++ ++ A+ + FD + ++ M G++ +L T SI
Sbjct: 58 DAIGLFGDMVKSRP--FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++ F R Q+ A+ +LG++ G +LN +L C + A +L +
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD------ 169
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
Q+VEM G+ PD++TF+ L+ GL + + +A+
Sbjct: 170 ------------------QMVEM----------GYQPDTVTFTTLVHGLFQHNKASEAVA 201
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+ + M KGC PD Y AVI+ G+ D + M E ++ Y +I GL
Sbjct: 202 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLC 261
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
K + + DA ++F +M +GI P T + LC+YG A + + L
Sbjct: 262 KYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLV 321
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYP-SDGEIYEYVIAGLCNIGQLENAVLVMEE 502
+ L+ GK L+ EM +S + D Y +I G C ++E + V E
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE 381
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++G + + Y+ L + + ++A +F+++
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 417
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 170/398 (42%), Gaps = 40/398 (10%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
N + EA+ L +K D+ +Y ++ L +R D N+L+ M K + D+
Sbjct: 194 NKASEAVALVERMVVK--GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 251
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
+ ++D + + A + ++E G+K D + N ++ CLC AS L + M
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 260 KGK------VLFN-------------------------------VMTYNIVISGWSKLGQ 282
K V FN V+ YN +I G+ K +
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V E V +E+ G +++T++ LI G +A D+A VF M G PD YN
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
++ + G+ + + ++ M + + ++ TYT +I L K+ KV D ++F + +G
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
+ P+ T T+ + C G A ++ + ++ G + Y L+R G
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASA 551
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+L EM+ G+ D + ++ + + G+L+ + L M
Sbjct: 552 ELIKEMRSCGFAGDASTFG-LVTNMLHDGRLDKSFLDM 588
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 134/295 (45%), Gaps = 1/295 (0%)
Query: 245 QRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
Q L + A LF M K + +++ ++ ++S +K+ + + + +++ G S +
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T+S I R ++ A+ + M + G GP N++++ + E + M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+P+ T+T L+ GL + K ++A+ + E M+ +G P T + + LC G P
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+ + K K + + Y ++ L + DL+++M+ G D Y +
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
I+ LCN G+ +A ++ + L K P + ++ L + + KL A L+ ++
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/183 (18%), Positives = 78/183 (42%), Gaps = 6/183 (3%)
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+ + G SS +C N L +L+ K+ DA+ +F +M+ PS + L +
Sbjct: 32 RSFAGASSDDCREN------LSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAI 85
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
+ + ++ + +G +L Y + + + + L + +M + GY
Sbjct: 86 AKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSI 145
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
++ G C+ ++ AV ++++ + G+ P + ++ L + L NK A L +
Sbjct: 146 VTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVER 205
Query: 538 IKI 540
+ +
Sbjct: 206 MVV 208
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 167/337 (49%), Gaps = 2/337 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV ++ ++V L + + FD M K+G+ P+L T + ++ +RAG++ A+++L
Sbjct: 366 DVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLL 425
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+E G++ A + + + G A F MK K ++ N++ N + +++
Sbjct: 426 DTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEM 485
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ E + + + G +PDS+T++ +++ + G++D+A+ + M GC PD
Sbjct: 486 GRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVV 545
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N++I + G DE + + M P + TY L+SGL K +V A+E+FE M+
Sbjct: 546 NSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIX 605
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+ P+T + + L+ C A+ M+ K + CK + Y ++ L K
Sbjct: 606 KKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNH 665
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
+H++++S +P I ++ GL GQ+ +A+
Sbjct: 666 AFWFFHQLKKSMHPDHVTICT-LLPGLVKCGQIGDAI 701
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 181/377 (48%), Gaps = 1/377 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+K+Y+ ++ ALG+++ + + +L +M G+ P++ T +I + RAG++ +A ++
Sbjct: 227 LKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFR 286
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
R++D G D + V++ LC + A LF MK + + Y ++ ++ G
Sbjct: 287 RMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFG 346
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ + ++ A+G+ PD +TF+ L++ L +A D+A FD M+++G P+ + YN
Sbjct: 347 DLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYN 406
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I + G ++ +K M S +P TY I KS + A+E FE+M +
Sbjct: 407 TLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAK 466
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
GIVP+ + L L G A M+ R+ G Y ++++ S G+
Sbjct: 467 GIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEA 526
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
++L EM +G D + +I L G+++ A + + P+ + Y+ L +
Sbjct: 527 VNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSG 586
Query: 522 LLASNKLESAYNLFRKI 538
L +++ A LF +
Sbjct: 587 LGKEGRVQKAIELFESM 603
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 189/417 (45%), Gaps = 4/417 (0%)
Query: 124 NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMC 183
++D L + + RG L VL ++ + SYN ++ L + F
Sbjct: 156 DLDTYLTIFKALSIRGGLRQMTTVL---NKMRKAGFVLNAYSYNGLIHLLIQSGFCGEAL 212
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
V M EG+ P L+T S +M + + + +L +ED GL+ + + + + L
Sbjct: 213 EVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVL 272
Query: 244 CQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
+ + A +F M + +++TY ++I GQ+ + + ++ A G PD
Sbjct: 273 GRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQ 332
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+ + L++ G +D E + M+ G PD + ++ DFDE +
Sbjct: 333 VIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDV 392
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M PN+ TY LI GLL++ ++ DAL++ + M G+ P+ T +F++ G
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGE 452
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A+ ++K + G ++ A L L+ G+ +++ ++E+G D Y
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ +GQ++ AV ++ E +R G P +V + L + L + +++ A+ +F ++K
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMK 569
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 148/305 (48%), Gaps = 1/305 (0%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F+ K ++ + SYN ++ L + + ++ DM G PD T ++++
Sbjct: 775 FDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHG 834
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF-NSMKGKVLFNVM 268
++G++ + ++ + K DA + N+V+ L + ++ A F + +
Sbjct: 835 KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR 894
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TY +I G +K+G++ E R+ +E+ G P+ F+ LI G G+ G + A ++F M
Sbjct: 895 TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+G PD +Y ++ G DE + Y+ + S +P+ Y R+I+GL KS+++
Sbjct: 955 VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+AL ++ EM +RGIVP T S + L G A MY++ + G + + Y L
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNAL 1074
Query: 449 LRRLS 453
+R S
Sbjct: 1075 IRGYS 1079
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 145/318 (45%), Gaps = 7/318 (2%)
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVE 285
G+ S N ++ L + + A LF MK + T+N++++ K G++ E
Sbjct: 782 LGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITE 841
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+ + KE+++ PD++T++ +I L ++ +D A++ F + P Y +I
Sbjct: 842 LFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLID 901
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
VG +E M+ ++ MS Y C+PN + LI+G K A ++F+ M++ GI P
Sbjct: 902 GLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRP 961
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---L 462
+ T ++ LC G A+ + + + G AY R ++G GK + L
Sbjct: 962 DLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYN---RIINGLGKSQRMEEAL 1018
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
L++EM+ G D Y ++ L G +E A + EE G P Y+ L
Sbjct: 1019 ALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGY 1078
Query: 523 LASNKLESAYNLFRKIKI 540
S E AY +++ + +
Sbjct: 1079 SLSENPEHAYTVYKNMMV 1096
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 183/418 (43%), Gaps = 39/418 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI--- 218
DV +YN ++ L + + + K+ ++PD T+ ++ ++ GQ+ AI
Sbjct: 646 DVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIA 704
Query: 219 -----QMLGRL-----EDF--GLKFDAESLNVVLWC---------------------LCQ 245
Q+ R+ ED G +AE +++ LC+
Sbjct: 705 RDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCK 764
Query: 246 RLHVGAASSLFNSMKGKVLFN--VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
A +F+ K+ + + +YN +I ++ + + K++ G +PD+
Sbjct: 765 HKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAF 824
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
TF+ L+ G++G+I + E++ M + C PD YN VIS+ + D+ + ++ +
Sbjct: 825 TFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDL 884
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
S + P TY LI GL K ++ +A+ +FEEM D G P+ + G
Sbjct: 885 VSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDT 944
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A ++K+ G + L +Y +L+ L G+ L ++E++ +G D Y +
Sbjct: 945 ETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRI 1004
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
I GL ++E A+ + E +G P Y+ L L + +E A ++ ++++A
Sbjct: 1005 INGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLA 1062
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 138/304 (45%), Gaps = 1/304 (0%)
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLK 291
E+ N +L L V +++F M+ K++ ++ TY + S G + +M VL
Sbjct: 122 TETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLN 181
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
++ GF ++ +++ LI L ++G +A+EV+ M +G P Y+A++
Sbjct: 182 KMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKR 241
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
D + M K M PN+ T+T I L ++ K+ +A E+F M D G P T T
Sbjct: 242 DSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYT 301
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
++ LC+ G A ++ K + G K Y LL + + FG + W +M+
Sbjct: 302 VLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEAD 361
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
GY D + ++ LC + A + ++G P+ Y+ L LL + ++E A
Sbjct: 362 GYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDA 421
Query: 532 YNLF 535
L
Sbjct: 422 LKLL 425
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/461 (20%), Positives = 184/461 (39%), Gaps = 78/461 (16%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K ++ V +YN ++ LG+ + M + +P+ + + ++D F + +
Sbjct: 568 MKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDE 627
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
V A++M ++ K D + N V++ L + V A F+ +K + + +T +
Sbjct: 628 VELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTL 687
Query: 274 ISGWSKLGQV---------------------------------VEMERVL---KEIVAEG 297
+ G K GQ+ EM++ + +E+V G
Sbjct: 688 LPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNG 747
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK-------------------------- 331
+ L+ L + R A ++FD +K
Sbjct: 748 ICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKA 807
Query: 332 ----------GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
GC PD +N +++ + G E + YK M S C+P+ TY +IS
Sbjct: 808 WDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISS 867
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L KS + AL+ F +++ P+ T ++ L G AM ++++ GCK +
Sbjct: 868 LAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPN 927
Query: 442 LTAYKLLLRRLSGFGKCG---MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ +L ++G+GK G L+ M G D + Y ++ LC G+++ A+
Sbjct: 928 CAIFNIL---INGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALY 984
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
E G P + Y+++ N L S ++E A L+ +++
Sbjct: 985 YFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMR 1025
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 121/287 (42%), Gaps = 34/287 (11%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN+++ +L + D + D+ P T ++D + G++ +A+++
Sbjct: 857 DAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLF 916
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLG 281
+ D+G K N +NI+I+G+ K+G
Sbjct: 917 EEMSDYGCKP----------------------------------NCAIFNILINGYGKIG 942
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ K +V EG PD +++ L++ L AGR+D+A+ F+ +K G PD AYN
Sbjct: 943 DTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYN 1002
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I+ +E + Y M + P++ TY L+ L + V A ++EE+
Sbjct: 1003 RIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLA 1062
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
G+ P T + + P A +YK GC ++ Y L
Sbjct: 1063 GLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 64/152 (42%)
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
KV D VFE M + I T + + L G + K RK G L+ +Y
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+ L G CG L+++ M G + Y ++ L E +++++E
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P+ ++ L + K++ AY +FR++
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRM 288
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
L++ +K + D +YN I+ LG+ + + + ++M G+ PDL T + +M +
Sbjct: 983 LYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLN 1042
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVL 240
AG V +A +M L+ GL+ D + N ++
Sbjct: 1043 LGLAGMVEQAKRMYEELQLAGLEPDVFTYNALI 1075
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 185/429 (43%), Gaps = 38/429 (8%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F + VA + +YN I+ L + + ++ K G +PD+ T + ++DS
Sbjct: 67 IFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSL 126
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK---VLF 265
+AG + +A ++ G + G + + +V++ LC+ + A L M K VL
Sbjct: 127 CKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLP 186
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF--SPDSLTFSFLIEGLGRAGRIDDAIE 323
N++TYN + G K E +++ + SPD++TFS LI+GL + G+ D+A
Sbjct: 187 NIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN 246
Query: 324 ---------------------------------VFDTMKEKGCGPDTNAYNAVISNYISV 350
+ ++M +KG PD Y+ ++ +
Sbjct: 247 DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKA 306
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
DE ++ GM+S C PN+ T+ +I GL KS + +A ++ ++ +R +VP T
Sbjct: 307 SRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTF 366
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+ C G A ++++ + + + L+ L G+ D+ M
Sbjct: 367 NILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 426
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G P + Y ++ GLC G++E +EE + G P + Y L L +++ +
Sbjct: 427 LGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDD 486
Query: 531 AYNLFRKIK 539
A L K+K
Sbjct: 487 ALQLVSKLK 495
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 165/382 (43%), Gaps = 3/382 (0%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
+ +++ EA L + V+ D +++ ++ L + D CN DM G P+
Sbjct: 200 KQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPN 257
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ T + +++ +A ++ +A M+ + D G+ D + +V++ C+ V A L +
Sbjct: 258 VVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLH 317
Query: 258 SMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
M + NV+T+N +I G K + E ++ ++ PD +TF+ LI G +AG
Sbjct: 318 GMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAG 377
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
+ A +F+ M K PD + A+I G + M + PN+ TY
Sbjct: 378 NFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYN 437
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
L+ GL KS ++ + E EEM+ G VP + T S + LC A+ + K +
Sbjct: 438 VLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSF 497
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G Y +L+ L GK + + EM G+ D + GL G L
Sbjct: 498 GWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGT 557
Query: 497 VLVMEESLRKGFCPSRLVYSKL 518
+ ++ L KG P S +
Sbjct: 558 MELLRVVLAKGMLPDATTCSSI 579
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 139/277 (50%), Gaps = 9/277 (3%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLK-EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+V YNIV+ + G+ + + E+ +G +P +T++ +I GL ++ + +E+
Sbjct: 44 SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMEL 103
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F+ + ++G PD YN +I + GD +E + + GMSS C PN+ TY+ LI+GL K
Sbjct: 104 FEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCK 163
Query: 385 SRKVADALEVFEEMLDRG--IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS- 441
++ +A E+ +EM + ++P+ T SFL+ LC A + + R ++S
Sbjct: 164 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 223
Query: 442 -LTAYKLLLRRLSGFGKCGMLLDLWH-EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+ L + G KCG + + +M GY + Y ++ GLC ++E A +
Sbjct: 224 DTVTFSTL---IDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAM 280
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
+E + KG P + YS L + +++++ A L
Sbjct: 281 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLH 317
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 135/293 (46%), Gaps = 36/293 (12%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V DV +Y+V+V A + D +L MA G P++ T + ++D ++ + +A
Sbjct: 289 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAF 348
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK---------------- 262
Q+ ++ + L D + N+++ C+ + AS+LF M K
Sbjct: 349 QIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGL 408
Query: 263 --------------------VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
V NV+TYN+++ G K G++ E L+E+V+ G P+S
Sbjct: 409 CKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPES 468
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+T+ L+ L RA R DDA+++ +K G PDT YN ++ G ++ + +
Sbjct: 469 MTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEE 528
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
M +P+ T+ GL +S +A +E+ +L +G++P T +S L+
Sbjct: 529 MVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 414 LEPLCSYGPPHAAMMMYK-KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
L+ LC G A+ +++ + + G ++ Y ++ L + G ++L+ E+ + G
Sbjct: 52 LQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRG 111
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
+ D Y +I LC G LE A + +G P+ + YS L N L +++ A
Sbjct: 112 HHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEAR 171
Query: 533 NLFRKI 538
L +++
Sbjct: 172 ELIQEM 177
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 162/318 (50%), Gaps = 5/318 (1%)
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEM---ERVL 290
S N+V+ LC+ + A + MK + V NV+TYN +I G+ K+G++ +M + +L
Sbjct: 165 SFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAIL 224
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
KE+ A+G P+ +TF+ LI+G + + A++VF M +G P+ YN++I+ +
Sbjct: 225 KEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNN 284
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
G +E M + +PN+ T+ L++G K++ V A E+F++M +GI P+ T
Sbjct: 285 GKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTY 344
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
++ C A +Y+ G ++ Y L+ L G +L EM
Sbjct: 345 NILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDT 404
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
+D Y +I LCN G+++ A+ +++E RKG PS+L Y+ + + L +
Sbjct: 405 KHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRA 464
Query: 531 AYNLFRKI-KIARQNDYA 547
A NL ++ K+ R + A
Sbjct: 465 ALNLRSQMEKVGRLANVA 482
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 177/363 (48%), Gaps = 4/363 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV---YKAIQML 221
S+N+++ L + + +++ DM GV+ ++ T + ++D + + G++ YKA +L
Sbjct: 165 SFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAIL 224
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ G+ + + N+++ C+ +V AA +F M + V NV+TYN +I+G
Sbjct: 225 KEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNN 284
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+V E + ++V P+ +T + L+ G + + A E+FD M ++G P+ Y
Sbjct: 285 GKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTY 344
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I Y + ++ Y+ M P++ TY LI+GL + + A + EM
Sbjct: 345 NILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDT 404
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+ + T ++ LC+ G A+ + + + G K S Y ++ G
Sbjct: 405 KHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRA 464
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L+L +M++ G ++ Y +I G C +LE+A ++ E L KG P+R+ Y ++
Sbjct: 465 ALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTE 524
Query: 521 KLL 523
+++
Sbjct: 525 EMM 527
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 157/358 (43%), Gaps = 4/358 (1%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V +M + + P L + +IV++ + G++ KA ++ ++ G+ + + N ++ C
Sbjct: 150 VYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYC 209
Query: 245 QRLHVGA---ASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
+ +G A ++ M+ + N +T+NI+I G+ K V +V E+ +G P
Sbjct: 210 KMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKP 269
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
+ +T++ LI GL G++++A + D M P+ +NA+++ + + + +
Sbjct: 270 NVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELF 329
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
M PN+ TY LI K + DA ++ ML +G+ P T + LC
Sbjct: 330 DDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRK 389
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
G AA + + K L Y +L+ L G+ L L EM G Y
Sbjct: 390 GDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTY 449
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+I G C G L A+ + + + G + Y+ L +KLE A L ++
Sbjct: 450 NTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEM 507
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 150/320 (46%), Gaps = 12/320 (3%)
Query: 228 GLKFDAESL--NVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVV 284
G F A S+ ++++W + L F L +V + N ++SG K+G++
Sbjct: 86 GDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIG 145
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ME V KE++ P ++F+ +I GL + G+++ A ++ + MK +G + YN +I
Sbjct: 146 DMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLI 205
Query: 345 SNYISVGDFDECMK---YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
Y +G + K K M + PN T+ LI G K + V+ A++VF EM +
Sbjct: 206 DGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQ 265
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G+ P+ T S + LC+ G + A + + K ++ + L L+GF K M+
Sbjct: 266 GVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNAL---LNGFCKNKMV 322
Query: 462 L---DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+L+ +M + G + Y +I C +E+A + L KG CP Y+ L
Sbjct: 323 KQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCL 382
Query: 519 SNKLLASNKLESAYNLFRKI 538
L LE+A NL ++
Sbjct: 383 IAGLCRKGDLEAARNLVSEM 402
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 126/277 (45%), Gaps = 2/277 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V +V +YN ++ L + + M + P++ T + +++ F + V +A
Sbjct: 267 VKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAG 326
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ + G+ + + N+++ C+ ++ A +L+ M GK V +V TYN +I+G
Sbjct: 327 ELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGL 386
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G + ++ E+ + D +T++ LI+ L G + A+ + D M KG P
Sbjct: 387 CRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQ 446
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I Y G+ + M N+ TY LI G K K+ DA + E
Sbjct: 447 LTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNE 506
Query: 398 MLDRGIVPSTGTITSFLEPLCSYG-PPHAAMMMYKKA 433
ML++G++P+ T E + G P +YK A
Sbjct: 507 MLEKGLIPNRMTYEIVTEEMMEKGFVPDIEGHLYKVA 543
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 107/254 (42%), Gaps = 3/254 (1%)
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E ++L + + F +S+ L+ + R E F + G + N ++
Sbjct: 76 EQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLM 135
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
S + VG+ + YK M EP + ++ +I+GL K K+ A ++ E+M RG+
Sbjct: 136 SGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVS 195
Query: 405 PSTGTITSFLEPLCSYGPP---HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
+ T + ++ C G + A + K+ R G + + +L+
Sbjct: 196 ANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAA 255
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+ ++ EM G + Y +I GLCN G++ A + ++ + P+ + ++ L N
Sbjct: 256 MKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNG 315
Query: 522 LLASNKLESAYNLF 535
+ ++ A LF
Sbjct: 316 FCKNKMVKQAGELF 329
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 190/419 (45%), Gaps = 36/419 (8%)
Query: 155 KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV 214
KH V + Y +++ AL + +L +M G PD++T + V+ +AG++
Sbjct: 228 KHGCVPNSI-IYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRI 286
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG--KVLFNVM---- 268
++A ++ R+ DA ++ LC+ V A ++ + + VL+N +
Sbjct: 287 HEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGY 346
Query: 269 ---------------------------TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
T+NI+I G K G +V L E+V +GF P+
Sbjct: 347 VVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPN 406
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+T++ LI+G + G ++A +V ++M KG +T YN +I G + ++ Y
Sbjct: 407 VITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYG 466
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
MSS C+P++ T+ LI GL K+ K+ +AL ++ +ML G++ +T T + +
Sbjct: 467 EMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLE 526
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM-QESGYPSDGEIY 480
A + + R GC L Y L++ L G L L +M E +PS
Sbjct: 527 LIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSC- 585
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I C G++ +A+ + + +++G P + Y+ L N L + + A NLF ++
Sbjct: 586 NILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQ 644
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 156/340 (45%), Gaps = 1/340 (0%)
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
+M G PD T +I++D + G + A++ L + G + + + +++ C++
Sbjct: 362 NMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQG 421
Query: 248 HVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
H AS + NSM K L N + YN +I K G++ + ++ E+ ++G PD TF+
Sbjct: 422 HFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFN 481
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
LI GL + ++++A+ ++ M +G +T YN +I ++ + + K M
Sbjct: 482 SLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFR 541
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
C + TY LI L K+ L + E+M I PS + + C G + A
Sbjct: 542 GCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDA 601
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ + + G + Y L+ L G+ L+L++ +Q G D Y +I+
Sbjct: 602 LQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISR 661
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
C G +A ++ + + GF P+ + +S L N + +N
Sbjct: 662 YCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNN 701
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 125/236 (52%), Gaps = 3/236 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ ++N ++ L + + + DM EGV + T + ++ +F+R + +A +++
Sbjct: 476 DIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLV 535
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
G + G D + N ++ LC+ L M G+ +F ++ + NI+I+ + +
Sbjct: 536 GEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRT 595
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+V + + L++++ G +PD +T++ LI GL + GR +A+ +F+ ++ KG PD Y
Sbjct: 596 GKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTY 655
Query: 341 NAVISNYISVGDF-DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
N +IS Y G F D C +KG+S+ PN T++ LI+ +K+ ++ +
Sbjct: 656 NTLISRYCYEGLFNDACQLLFKGVSN-GFIPNEITWSILINYFVKNNSDSEQFTIL 710
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 175/412 (42%), Gaps = 44/412 (10%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y +++ LG F + +L M EG ++M + +AG +A ++L L+
Sbjct: 97 YYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLL--LD 154
Query: 226 DFGLK-FDA--ESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+G+ F+ +S NVVL L A ++F M + + V T+ +V+ + +
Sbjct: 155 MWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVN 214
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+V +L+++ G P+S+ + LI L R+++A+++ + M GC PD +N
Sbjct: 215 EVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFN 274
Query: 342 AVISNYISVGDFDECMKYY-------------------------------KGMSSYNCEP 370
VI G E K + + M S P
Sbjct: 275 DVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNP 334
Query: 371 NMDTYTRLISGLLKSRKVADALE-VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
N Y LI+G + S + +A + +++ M+ G P T ++ LC G +A+
Sbjct: 335 NTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEF 394
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAG 486
+ K G + ++ Y +L + GF K G + + + M G + Y +I
Sbjct: 395 LDEMVKKGFEPNVITYTIL---IDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGA 451
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
LC G++++A+ + E KG P ++ L L ++K+E A L+R +
Sbjct: 452 LCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDM 503
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 187/381 (49%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
VA +V +YN++++AL R ++L DM G P++ T + ++ +F RAG+V A
Sbjct: 146 VAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAE 205
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+++G + D GLK + + N ++ +C+ + A +F+ M + L + ++YN ++ G+
Sbjct: 206 RLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGY 265
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G E V E+ +G PD +TF+ LI + +AG ++ A+ + M+E+G +
Sbjct: 266 CKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNE 325
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+ A+I + G D+ + +GM +P++ Y LI+G ++ +A E+ E
Sbjct: 326 VTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHE 385
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M +G+ P T ++ + C H+A + ++ + G Y L+R L +
Sbjct: 386 MEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKR 445
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L+ M + G D Y +I G C G +E A+ + ++ ++ G P + YS
Sbjct: 446 LSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSV 505
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L N L S + A L K+
Sbjct: 506 LINGLSKSARAMEAQQLLFKL 526
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 160/320 (50%), Gaps = 2/320 (0%)
Query: 228 GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEM 286
G+ + + N+++ LC R H A S+ M+G NV+TYN +++ + + G+V
Sbjct: 145 GVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGA 204
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
ER++ ++ G P+ +TF+ ++ G+ +AG+++DA +VFD M +G PD +YN ++
Sbjct: 205 ERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGG 264
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
Y G E + + M+ P++ T+T LI + K+ + A+ + +M +RG+ +
Sbjct: 265 YCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMN 324
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
T T+ ++ C G A++ + R+ K S+ Y L+ G+ +L H
Sbjct: 325 EVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLH 384
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
EM+ G D Y +I+ C +A + ++ L KG P + YS L L
Sbjct: 385 EMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEK 444
Query: 527 KLESAYNLFRK-IKIARQND 545
+L A+ LF+ IK+ Q D
Sbjct: 445 RLSDAHVLFKNMIKLGLQPD 464
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 130/274 (47%), Gaps = 1/274 (0%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V+ YN V+ S + R ++++G +P+ T++ LI L G +A+ +
Sbjct: 115 SVLAYNAVLLALSD-ASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSIL 173
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
M+ GCGP+ YN +++ + G+ D + M +PN+ T+ +++G+ K+
Sbjct: 174 RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKA 233
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
K+ DA +VF+EM+ G+ P + + + C G H A+ ++ + + G + +
Sbjct: 234 GKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTF 293
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ + G + L +M+E G + + +I G C G L++A+L + +
Sbjct: 294 TSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQ 353
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
PS + Y+ L N +++ A L +++
Sbjct: 354 CRIKPSVVCYNALINGYCMVGRMDEARELLHEME 387
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 142/335 (42%), Gaps = 16/335 (4%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ + V YN ++ D +L +M +G+ PD+ T S ++ ++ +
Sbjct: 351 MRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCD 410
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
+ A ++ ++ + G+ DA + + ++ LC+ + A LF +M K + + TY
Sbjct: 411 THSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTS 470
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G K G V + ++V G PD +T+S LI GL ++ R +A ++ + +
Sbjct: 471 LIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEE 530
Query: 333 CGPDTNAYNAV---------------ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
P Y+A+ + + G +E K Y+ M N + Y+
Sbjct: 531 PIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSV 590
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
LI G ++ V AL ++ML RG P++ + S + L G A + ++
Sbjct: 591 LIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCC 650
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
A K L+ G +LD+ H M + G
Sbjct: 651 SLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDG 685
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 96/243 (39%), Gaps = 36/243 (14%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
G+ P L ++ ++ L A + A FD+M G P+ YN +I G E
Sbjct: 111 GYVPSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
+ + M C PN+ TY L++ ++ +V A + MLD G+ P+ T S +
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
+C G + ARKV + EM G D
Sbjct: 230 MCKAGK-------MEDARKV----------------------------FDEMMREGLAPD 254
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
G Y ++ G C G A+ V E +KG P + ++ L + + + LE A L R
Sbjct: 255 GVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVR 314
Query: 537 KIK 539
+++
Sbjct: 315 QMR 317
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 122/273 (44%), Gaps = 25/273 (9%)
Query: 108 QKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYN 167
Q++ KGV+ DA+ + + +V+ +A VLF N IK + D +Y
Sbjct: 419 QQMLEKGVLPDAI-------TYSSLIRVLCEEKRLSDAHVLFKNM-IKL-GLQPDEFTYT 469
Query: 168 VIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED- 226
++ + + ++ M K GV PD+ T S++++ ++ + +A Q+L +L
Sbjct: 470 SLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHE 529
Query: 227 ----FGLKFDA----------ESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYN 271
K+DA +S+ +L C + + A ++ SM + + Y+
Sbjct: 530 EPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYS 589
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
++I G + G V++ K+++ GF+P+S + LI GL G + +A +V +
Sbjct: 590 VLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNC 649
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
D A A+I ++ G+ D + GM+
Sbjct: 650 CSLADAEASKALIDLNLNEGNVDAVLDVLHGMA 682
>gi|115476116|ref|NP_001061654.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|113623623|dbj|BAF23568.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|125603197|gb|EAZ42522.1| hypothetical protein OsJ_27088 [Oryza sativa Japonica Group]
gi|215740653|dbj|BAG97309.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 511
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 183/399 (45%), Gaps = 17/399 (4%)
Query: 156 HPNVA---KDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
HP A + +Y+ +V ALGR + FD ++ + A +G T +++ ++ AG
Sbjct: 93 HPPPAASSRAADAYDAVVDALGRARQFDAAWRLVVEAAADGAATP-RTFAVLARRYVAAG 151
Query: 213 QVYKAIQMLGRLEDF-GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYN 271
+A++ +E F G + DA +L LC+ + A+ +FN K K N Y
Sbjct: 152 MTRQAVRAFDDMEAFVGREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYKYEPNEKMYT 211
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG------RIDDAI--- 322
++I GW K+ + ++ LK+++ G P+ +T++ L+ G+ R R D +
Sbjct: 212 VLIYGWCKVNRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAA 271
Query: 323 -EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
++ M ++G P+ +Y+ ++ Y + C+ ++ M P + TYT +I
Sbjct: 272 EDLLKEMHQRGIEPNVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKC 331
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L ++ DA + +EM G+ PS T F + + A+ +Y K + G +
Sbjct: 332 LASCGRLDDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPAT 391
Query: 442 --LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+ Y +LL + ++ +W++M ES D Y ++ GLC+ + A
Sbjct: 392 PDIHTYNILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQF 451
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
E + +GF P ++ + L L+ ++ L + L +++
Sbjct: 452 FMEMIERGFLPQKITFETLYRGLIQADMLRTWRRLKKRV 490
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 27/285 (9%)
Query: 155 KHPNVAKDV------------KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
K+P VA +V K Y V++ + D L DM G+ P++ T +
Sbjct: 187 KYPKVAAEVFNKRKYKYEPNEKMYTVLIYGWCKVNRNDMAQKFLKDMIYHGIEPNIVTYN 246
Query: 203 IVMDSFIRAGQVYK----------AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
I+++ R ++ A +L + G++ + S +V+L +
Sbjct: 247 ILLNGICRHASLHPDYRFDRTVRAAEDLLKEMHQRGIEPNVTSYSVILHVYSRAHKPELC 306
Query: 253 SSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS-FLIE 310
+F SMK + + V TY VI + G++ + E +L E+ +EG P T++ F E
Sbjct: 307 LCMFRSMKERGICPTVATYTSVIKCLASCGRLDDAESLLDEMASEGVCPSPATYNCFFKE 366
Query: 311 GLGRAGRIDDAIEVFDTMKEKG--CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
GR ++ A+++++ MK G PD + YN ++ +I + D M+ + M
Sbjct: 367 YRGRKD-VNGALQLYNKMKAPGSPATPDIHTYNILLGMFIKLNQHDTVMQVWNDMCESTV 425
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
P++++YT L+ GL ++K +A + F EM++RG +P T +
Sbjct: 426 GPDLNSYTLLVHGLCDNKKWREACQFFMEMIERGFLPQKITFETL 470
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 120/289 (41%), Gaps = 27/289 (9%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
Y+ V+ + Q R++ E A+G + TF+ L AG A+ FD M
Sbjct: 105 AYDAVVDALGRARQFDAAWRLVVEAAADGAA-TPRTFAVLARRYVAAGMTRQAVRAFDDM 163
Query: 329 KE-KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS-------YNCEPNMDTYTRLIS 380
+ G PD + ++ C Y +++ Y EPN YT LI
Sbjct: 164 EAFVGREPDAAEFTTLLDTL--------CKYKYPKVAAEVFNKRKYKYEPNEKMYTVLIY 215
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH----------AAMMMY 430
G K + A + ++M+ GI P+ T L +C + H AA +
Sbjct: 216 GWCKVNRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLL 275
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
K+ + G + ++T+Y ++L S K + L ++ M+E G Y VI L +
Sbjct: 276 KEMHQRGIEPNVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASC 335
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G+L++A +++E +G CPS Y+ + + A L+ K+K
Sbjct: 336 GRLDDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMK 384
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 206/486 (42%), Gaps = 65/486 (13%)
Query: 90 RAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLF 149
+ + +LP F+Q L KG +D ++ +VG+++++G
Sbjct: 241 KVIKRGVLPNLFTYNFFIQGLCQKG---------ELDAAVRMVGRLIDQGP--------- 282
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
DV +YN ++ L + F L + EG+ PD T + ++ +
Sbjct: 283 ----------KPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYC 332
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK------V 263
+ G V A ++L G D + ++ LC A +LFN GK +
Sbjct: 333 KGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 264 LFN------------------------------VMTYNIVISGWSKLGQVVEMERVLKEI 293
L+N V T+NI+++G K+G V + + ++K +
Sbjct: 393 LYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+++G+ PD TF+ LI G ++++A+E+ D M + G PD YN++++ +
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKY 512
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
++ M+ YK M C PN+ T+ L+ L + K+ AL + EEM ++ + P T +
Sbjct: 513 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTL 572
Query: 414 LEPLCSYGPPHAAMMMYKKARKV-GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
++ C G A +++K +V S Y +++ + M L+ EM +
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC 632
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
DG Y ++ G C G ++ + E + GF PS ++ N L +++ A
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAA 692
Query: 533 NLFRKI 538
+ ++
Sbjct: 693 GIIHRM 698
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 171/374 (45%), Gaps = 1/374 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V SYN I+ L +FD V M G+ PD+ + +I M SF R + + A+++L
Sbjct: 111 VFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLN 170
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLG 281
+ G + + + V+ + LF M V + T+N ++ K G
Sbjct: 171 NMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKG 230
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
V E E++L +++ G P+ T++F I+GL + G +D A+ + + ++G PD YN
Sbjct: 231 DVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYN 290
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I F E Y + + EP+ TY LI+G K V A + +
Sbjct: 291 YLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFN 350
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G VP T S ++ LC G + A+ ++ +A G K ++ Y L++ LS G
Sbjct: 351 GFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEA 410
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L EM E G + + + ++ GLC +G + +A +++ + KG+ P ++ L +
Sbjct: 411 AQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 522 LLASNKLESAYNLF 535
K+E+A +
Sbjct: 471 YSTQLKMENALEIL 484
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 162/356 (45%), Gaps = 1/356 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+L + K GV P+L T + + + G++ A++M+GRL D G K D + N +++ LC
Sbjct: 238 LLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLC 297
Query: 245 QRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ A + + L + TYN +I+G+ K G V ER+L V GF PD
Sbjct: 298 KNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEF 357
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T+ LI+GL G + A+ +F+ KG P+ YN +I + G E + M
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEM 417
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
S P + T+ L++GL K V+DA + + M+ +G P T + +
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+ + G + Y LL L K +++ + M E G + + +
Sbjct: 478 ENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ LC +L+ A+ ++EE K P + + L + + L+ AY LFRK++
Sbjct: 538 LESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME 593
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 165/383 (43%), Gaps = 9/383 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V +Y +V F D + M GV+ L T + ++ + G V + ++L
Sbjct: 180 NVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLL 239
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-----FNVMTYNIVISG 276
++ G+ + + N + LCQ+ + AA M G+++ +V+TYN +I G
Sbjct: 240 DKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVR----MVGRLIDQGPKPDVVTYNYLIYG 295
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K + E E L ++V EG PDS T++ LI G + G + A + G PD
Sbjct: 296 LCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPD 355
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y ++I G+ + + + +PN+ Y LI GL + +A ++
Sbjct: 356 EFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLAS 415
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
EM ++G++P T + LC G A + K G + + +L+ S
Sbjct: 416 EMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQL 475
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K L++ M ++G D Y ++ GLC + E+ + + + KG P+ ++
Sbjct: 476 KMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFN 535
Query: 517 KLSNKLLASNKLESAYNLFRKIK 539
L L +KL+ A L ++K
Sbjct: 536 ILLESLCRYHKLDKALGLLEEMK 558
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 112/246 (45%), Gaps = 5/246 (2%)
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK-GCGPDTNAYNAVISNYISVGDFD 354
+GF T+ +IE LG G+ + EV M++ G Y + NY G
Sbjct: 34 DGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKVQ 93
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E + ++ M Y+CEP + +Y ++S L+ S A +V+ M DRGI P + T +
Sbjct: 94 EAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRM 153
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL--SGFGKCGMLLDLWHEMQESG 472
+ C PHAA+ + GC++++ AY ++ F G +L+ +M SG
Sbjct: 154 KSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEG--YELFGKMLASG 211
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
+ ++ LC G ++ ++++ +++G P+ Y+ L +L++A
Sbjct: 212 VSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAV 271
Query: 533 NLFRKI 538
+ ++
Sbjct: 272 RMVGRL 277
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 118/305 (38%), Gaps = 38/305 (12%)
Query: 252 ASSLFNSMKGKVLF--NVMTYNIVISGWSKLGQVVEMERVLKEIVAE-GFSPDSLTFSFL 308
A +FNSM+ + F + TY +I G+ ME VL ++ G +
Sbjct: 23 ALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGA 82
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY-------- 360
++ GR G++ +A+ VF+ M C P +YNA++S + G FD+ K Y
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGI 142
Query: 361 ---------------------------KGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
MSS CE N+ Y ++ G + + E
Sbjct: 143 TPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYE 202
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+F +ML G+ T L LC G + K K G +L Y ++ L
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLC 262
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
G+ + + + + G D Y Y+I GLC + + A + + + + +G P
Sbjct: 263 QKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSF 322
Query: 514 VYSKL 518
Y+ L
Sbjct: 323 TYNTL 327
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 89/180 (49%), Gaps = 2/180 (1%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A ++ ++N+++++L R D +L +M + VNPD T ++D F + G + A
Sbjct: 528 APNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 220 MLGRLED-FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+ ++E+ + + + N+++ ++L+V A LF M + L + TY +++ G+
Sbjct: 588 LFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G V + L E++ GF P T +I L R+ +A + M +KG P+
Sbjct: 648 CKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 171/358 (47%), Gaps = 42/358 (11%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V +V YN I+ ++ + K + ++ S+M EG++PD+ T S ++ F G++ AI
Sbjct: 174 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAI 233
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
+ ++ +K D V T+NI++ G+
Sbjct: 234 DLFNKMILENIKPD----------------------------------VYTFNILVDGFC 259
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G++ E + V ++ +G P+ +T+ L++G +++ A +F+TM + G PDT
Sbjct: 260 KDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQ 319
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
+YN +I+ + + DE M +K M N PN+ TYT LI GL KS K++ AL++ +EM
Sbjct: 320 SYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEM 379
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV--------GCKLSLTAYKLLLR 450
DRG+ P T +S L+ LC A+ + K + G L + AY ++++
Sbjct: 380 HDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQ 439
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
G L L +M+++G D + YE +I L + + A ++ E + +G
Sbjct: 440 GFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/390 (20%), Positives = 176/390 (45%), Gaps = 21/390 (5%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
FN + N + + I+ +L + + ++ M +G+ +L TL+I+++ F
Sbjct: 47 FNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFS 106
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMT 269
+ GQ + + + G + +L ++ LC ++ +
Sbjct: 107 QLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKV---------------------S 145
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
Y +I+G K+GQ ++L+ + + P+ + ++ +I+ + + +++A +++ M
Sbjct: 146 YGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 205
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
+G PD Y+A+IS + VG + + + M N +P++ T+ L+ G K K+
Sbjct: 206 SEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMK 265
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
+ VF M+ +GI P+ T S ++ C + A ++ + G +Y +++
Sbjct: 266 EGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMI 325
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
K ++L+ +M + Y +I GLC G++ A+ +++E +G
Sbjct: 326 NGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVP 385
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P + YS + + L +++++ A L K+K
Sbjct: 386 PDIITYSSILDALCKNHQVDKAIALLTKLK 415
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 9/256 (3%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N+ DV ++N++V + V + M K+G+ P++ T +MD + QV KA
Sbjct: 243 NIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKA 302
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
+ + G+ D +S N+++ C+ V A +LF M K ++ NV+TY +I G
Sbjct: 303 NSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDG 362
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI--------EVFDTM 328
K G++ +++ E+ G PD +T+S +++ L + ++D AI +VF+ +
Sbjct: 363 LCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDL 422
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
KG D AY +I + G F+E + M P+ TY +I L K +
Sbjct: 423 FVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDEN 482
Query: 389 ADALEVFEEMLDRGIV 404
A ++ EM+ RG++
Sbjct: 483 DMAEKLLREMIARGLL 498
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 13/165 (7%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EAM LF K N+ +V +Y ++ L + + ++ +M GV PD+ T S
Sbjct: 336 EAMNLFKKMHCK--NIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSS 393
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDF--------GLKFDAESLNVVLWCLCQRLHVGAASSL 255
++D+ + QV KAI +L +L+D G D + V++ C + A +L
Sbjct: 394 ILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALAL 453
Query: 256 FNSMK--GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
+ M+ G++ + TY I+I K + E++L+E++A G
Sbjct: 454 LSKMEDNGRIP-DAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 174/353 (49%), Gaps = 1/353 (0%)
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
+ ++GV+PD+ S +++F + G+V AIQ+ +E G+ + + N ++ LC+
Sbjct: 236 ETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHG 295
Query: 248 HVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
++ A M K V ++TY+++I+G KL + E VLKE + +GF+P+ + ++
Sbjct: 296 NLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYN 355
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
LI+G + G + DA+ + M KG P++ N++I + +G ++ + M S
Sbjct: 356 TLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSR 415
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
N +T +I L + + AL EML R + P+ G +T+ + LC G A
Sbjct: 416 GFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDA 475
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ ++ + + G +L L+ L G + L +M E G+ D Y +I+G
Sbjct: 476 VELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISG 535
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
C G++E + E +++G P Y+ L + + KL+ A NL+ + K
Sbjct: 536 CCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECK 588
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 176/372 (47%), Gaps = 3/372 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++ I+ L F+ L +M + P+ L+ ++ + G+ A+++ RL
Sbjct: 423 AFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRL 482
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQ 282
+ G + + N ++ LC+ ++ A L M +G VL + +TYN +ISG K G+
Sbjct: 483 LEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVL-DKITYNTLISGCCKEGK 541
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V E ++ E+V +G PD+ T++ LI G+ R G++D+A+ +++ K + P+ Y
Sbjct: 542 VEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGV 601
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I Y +E K + + + N E N Y LI ++ +A ++ ++M +G
Sbjct: 602 MIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG 661
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
I P+T T +S + +C+ G A + + RK G ++ Y L+ G+ ++
Sbjct: 662 IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVV 721
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
++ EM + Y +I G G ++ A ++ E + KG P + Y+ L+N
Sbjct: 722 NVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGF 781
Query: 523 LASNKLESAYNL 534
K+E + +
Sbjct: 782 CKEGKIEEGFKI 793
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 175/409 (42%), Gaps = 36/409 (8%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN ++ + + DM +G+NP+ TL+ ++ F + GQ+ +A +L +
Sbjct: 354 YNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEML 413
Query: 226 DFGLKFDAESLNVVLWCLC------------------------------------QRLHV 249
G + + ++ LC + H
Sbjct: 414 SRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHS 473
Query: 250 GAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A F ++ N++T N +I G K G + E R+LK+++ GF D +T++ LI
Sbjct: 474 DAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLI 533
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
G + G++++ ++ M ++G PDT YN +I +G DE + + S +
Sbjct: 534 SGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLV 593
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
PN+ TY +I G K+ K+ + ++F E+L + + ++ + + C G A +
Sbjct: 594 PNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL 653
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ R G + Y L+ + G+ L EM++ G + Y +I G C
Sbjct: 654 HDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCK 713
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+GQ++ V V++E P+++ Y+ + + S +++A L ++
Sbjct: 714 LGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM 762
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/472 (22%), Positives = 200/472 (42%), Gaps = 73/472 (15%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
+G +A+ LFF+ ++ V+ +V +YN ++ L + D M K+GVN
Sbjct: 258 KGGKVEDAIQLFFD--MEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNAT 315
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
L T S++++ ++ + +A +L + G + N ++ C+ ++G A +
Sbjct: 316 LITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRG 375
Query: 258 SMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS----------------- 299
M K + N +T N +I G+ K+GQ+ + E +L+E+++ GFS
Sbjct: 376 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNS 435
Query: 300 ------------------PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
P+ + L+ GL + G+ DA+E++ + EKG G + N
Sbjct: 436 RFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTN 495
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A+I G+ E ++ K M + TY LISG K KV + ++ EM+ +
Sbjct: 496 ALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ 555
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMM----------------------YKKARKV--- 436
GI P T T + +C G A+ + Y KA K+
Sbjct: 556 GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEG 615
Query: 437 ----------GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+L+ Y L+R G L +M+ G P Y +I G
Sbjct: 616 EKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHG 675
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+CNIG++E+A +++E ++G P+ + Y+ L +++ N+ +++
Sbjct: 676 MCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEM 727
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 136/290 (46%), Gaps = 1/290 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN ++ + + + +M K+G+ PD T ++++ R G++ +A+ +
Sbjct: 525 DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLW 584
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
+ L + + V++ C+ + LF + + L N + YN +I + +
Sbjct: 585 NECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRN 644
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G VE ++ ++ ++G P + T+S LI G+ GR++DA + D M+++G P+ Y
Sbjct: 645 GNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCY 704
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
A+I Y +G D+ + + MSSY+ PN TYT +I G KS + A ++ EM+
Sbjct: 705 TALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVG 764
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
+GIVP T T C G + + G L Y L+
Sbjct: 765 KGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVH 814
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 145/331 (43%), Gaps = 1/331 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
+ ++G +L T + ++ + G + +A+++L ++ + G D + N ++ C+
Sbjct: 482 LLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGK 541
Query: 249 VGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
V L M K + + TYN++I G ++G++ E + E + P+ T+
Sbjct: 542 VEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGV 601
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
+I+G +A +I++ ++F + + ++ YN +I Y G+ E K + M S
Sbjct: 602 MIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG 661
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
P TY+ LI G+ ++ DA + +EM G++P+ T+ + C G +
Sbjct: 662 IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVV 721
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+ ++ + Y +++ S G L HEM G D Y + G
Sbjct: 722 NVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGF 781
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
C G++E + + ++G + Y+ L
Sbjct: 782 CKEGKIEEGFKICDYMSQEGLPLDEITYTTL 812
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 160/381 (41%), Gaps = 70/381 (18%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
+A +GV P ++T + ++ S ++A ++ K+ W
Sbjct: 203 LANKGVFPTVKTCTFLLSSLVKANELEKS----------------------YW------- 233
Query: 249 VGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
+F +M+ V +V ++ I+ + K G+V + ++ ++ G SP+ +T++ L
Sbjct: 234 ------VFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNL 287
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I GL + G +D+A + M + G Y+ +I+ + + F+E K
Sbjct: 288 IHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGF 347
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
PN Y LI G K + DAL + +M+ +GI P++ T+ S ++ C G A
Sbjct: 348 TPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAEC 407
Query: 429 MYKKARKVGCKLSLTAY---------------------KLLLRR--------------LS 453
+ ++ G ++ A+ ++LLR L
Sbjct: 408 ILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLC 467
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
GK ++LW + E G+ ++ +I GLC G ++ AV ++++ L +GF ++
Sbjct: 468 KEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKI 527
Query: 514 VYSKLSNKLLASNKLESAYNL 534
Y+ L + K+E + L
Sbjct: 528 TYNTLISGCCKEGKVEEGFKL 548
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 158/354 (44%), Gaps = 15/354 (4%)
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
L + ++M S I +G V A +L RL D L VL+ + H+ AS++ +
Sbjct: 112 LRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLP--------VLFGDPKNRHIEIASAMAD 163
Query: 258 -SMKGKVLFNVMTYNIVISGWSKLGQVVEMER---VLKEIVAEGFSPDSLTFSFLIEGLG 313
+ G+ V +++I + + V V + + +G P T +FL+ L
Sbjct: 164 LNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLV 223
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+A ++ + VF+TM++ G PD ++ I+ + G ++ ++ + M PN+
Sbjct: 224 KANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVV 282
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
TY LI GL K + +A E+M+ G+ + T + + L + A + K+
Sbjct: 283 TYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKET 342
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
+ G + Y L+ G G L + +M G + +I G C IGQ+
Sbjct: 343 LEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQM 402
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK--IKIARQND 545
E A ++EE L +GF + ++ + + L +++ ESA R+ ++ R ND
Sbjct: 403 EQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPND 456
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 85/183 (46%), Gaps = 1/183 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN +++A R + DM +G+ P T S ++ G++ A ++ +
Sbjct: 634 YNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMR 693
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVV 284
GL + ++ C+ + ++ M + N +TY ++I G+SK G +
Sbjct: 694 KEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMK 753
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
++L E+V +G PD++T++ L G + G+I++ ++ D M ++G D Y ++
Sbjct: 754 TAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLV 813
Query: 345 SNY 347
+
Sbjct: 814 HGW 816
>gi|125564557|gb|EAZ09937.1| hypothetical protein OsI_32236 [Oryza sativa Indica Group]
Length = 544
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 184/375 (49%), Gaps = 8/375 (2%)
Query: 147 VLFFNWAIKHPNVAKDVKS--YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIV 204
V FF+ + P++ D Y ++ L + F ++L +M + V + + +
Sbjct: 129 VAFFHHVL--PSLPPDSLPALYAAMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILAL 186
Query: 205 MDSFIRAGQVYKAIQMLGRLEDFGL-KFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
+ ++RA +A + R+E++G D +L +L L ++ A ++F+S K
Sbjct: 187 IRRYVRAEMPSEASDLFRRMEEYGAGAPDPATLASLLGALSKKRLASEAQAMFDSYKSVF 246
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+V+ Y ++ W + G++ E ERV E+ G +P+ T++ +I+ + RAG++ A E
Sbjct: 247 TPDVVLYTTLVHAWCRSGRLDEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQE 306
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI-SGL 382
+ M + GC P+T +NA++ ++ G ++ ++ + M CEP++ TY L+ +
Sbjct: 307 LLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHC 366
Query: 383 LKSRKVAD-ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
K + D A+++ M+ +G +P T L+ + G +AA +Y++ +++ CK +
Sbjct: 367 GKGQSNLDAAMKMLTRMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPN 426
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ Y LL+R + M+L + +M G + Y +I C G + A + +
Sbjct: 427 VVTYNLLMRLFNLEKSMDMVLRIKRDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTLR 486
Query: 502 ESL-RKGFCPSRLVY 515
E + K P++ VY
Sbjct: 487 EMVEEKALKPTKPVY 501
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 165/359 (45%), Gaps = 47/359 (13%)
Query: 135 VVNRGNLSGEAMVLFFNW-AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG 193
+++ L+ EA +F ++ ++ P DV Y +V A R D V ++M + G
Sbjct: 225 ALSKKRLASEAQAMFDSYKSVFTP----DVVLYTTLVHAWCRSGRLDEAERVFAEMQQAG 280
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAAS 253
V P++ T + V+D+ RAGQV +A ++L ++ D G + + N ++ R HV A
Sbjct: 281 VTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIM-----RAHVKAGR 335
Query: 254 SLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE--- 310
S QV+++ ++++ G PD +T++FL+E
Sbjct: 336 S--------------------------EQVLQVHNQMRQL---GCEPDIITYNFLMETHC 366
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
G G++ +D A+++ M KGC PD + +N ++ + +G+ + K Y+ M C+P
Sbjct: 367 GKGQSN-LDAAMKMLTRMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKP 425
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP-PHAAMMM 429
N+ TY L+ + + L + +M +G+ P+ T + +E C G A M +
Sbjct: 426 NVVTYNLLMRLFNLEKSMDMVLRIKRDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTL 485
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY---PSDGEIYEYVIA 485
+ + K + Y ++L L G+ +L M + G+ P++ ++ + A
Sbjct: 486 REMVEEKALKPTKPVYDMVLALLRKAGQLRRHEELVEMMVDRGFISRPANDALWRAISA 544
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 193/430 (44%), Gaps = 39/430 (9%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET-LSIVMDS 207
FF WA K N D +Y ++ L + + M ++ +M + + T LS V+
Sbjct: 109 FFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRM 168
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLF 265
A V KAI + +++ + A++ N ++ L L+N M +G
Sbjct: 169 LGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFP 228
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP------------------------- 300
+ MTY+ +IS + KLG+ ++L E+ G P
Sbjct: 229 DTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLF 288
Query: 301 ----------DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
D T++ LI GLG+AGRID+A F M+ +GC PDT N +I+
Sbjct: 289 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKA 348
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR-KVADALEVFEEMLDRGIVPSTGT 409
G D+ MK ++ M + C P++ TY +I L +S+ + ++ FE M + GI PS+ T
Sbjct: 349 GRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFT 408
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
+ ++ C AMM+ ++ + G AY L+ L + + +L+ E++
Sbjct: 409 YSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 468
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
E+ S +Y +I L G+L++A+ + +E + G P Y+ L + L + L+
Sbjct: 469 ENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLD 528
Query: 530 SAYNLFRKIK 539
A + R+++
Sbjct: 529 EALSTMRRMQ 538
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 190/410 (46%), Gaps = 5/410 (1%)
Query: 129 LDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSD 188
L V +++ + +A+ +F+ IK ++YN ++ L ++ + + ++
Sbjct: 162 LSEVVRMLGNAKMVSKAIAIFYQ--IKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNE 219
Query: 189 MAKEG-VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
M+ EG PD T S ++ +F + G+ AIQ+L ++D G++ + +++ +
Sbjct: 220 MSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLN 279
Query: 248 HVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
V A SLF M+ + +V TY +I G K G++ E E+ EG PD++ +
Sbjct: 280 DVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMN 339
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN-YISVGDFDECMKYYKGMSS 365
+I LG+AGR+DDA+++F M C P YN +I + S E +++ M
Sbjct: 340 NMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKE 399
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
P+ TY+ LI G K+ ++ A+ + EEM ++G P S ++ L
Sbjct: 400 SGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDL 459
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A ++++ ++ S Y ++++ L G+ ++++ EM + G D Y +++
Sbjct: 460 ACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMS 519
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
GL G L+ A+ M G P Y+ + N L L + F
Sbjct: 520 GLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLQKQEDLIVQWRCF 569
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 119/276 (43%), Gaps = 37/276 (13%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT-FSFLIEGLGRAGRIDDAIEVFDT 327
TY +I + Q EM ++++E+V + T S ++ LG A + AI +F
Sbjct: 125 TYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQ 184
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY-NCEPNMDTYTRLISGLLKSR 386
+K + C P AYN++I + G +++ + Y MS+ +C P+ TY+ LIS K
Sbjct: 185 IKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLG 244
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+ A+++ EM D G+ P+T T + H A+ ++++ R C+ + Y
Sbjct: 245 RRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYT 304
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+R GL G+++ A E R+
Sbjct: 305 ELIR-----------------------------------GLGKAGRIDEAYHFFYEMQRE 329
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
G P +V + + N L + +L+ A LF+++ R
Sbjct: 330 GCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLR 365
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 177/410 (43%), Gaps = 36/410 (8%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YNV++ L + + +L M G P+ T ++++ + R + +A+++L +
Sbjct: 281 TYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 340
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSL-----FNSMKGKVLF-------------- 265
E L A S ++ LC + A+ L F+ +K V+
Sbjct: 341 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRI 400
Query: 266 -----------------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
++ YN +IS SK G++ E L EI G PD++TF
Sbjct: 401 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 460
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I G + G++ +A + FD M + G P+ Y +I+ + G+ E + ++ + +
Sbjct: 461 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGV 520
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P++ T + I GLLK+ +V +AL+VF E+ ++G+VP T +S + C G A
Sbjct: 521 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 580
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++ + G ++ Y L+ L G L+ M E G D Y +I G C
Sbjct: 581 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 640
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ A + E KG P VY+ L + +E A NLFR++
Sbjct: 641 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM 690
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 176/387 (45%), Gaps = 14/387 (3%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
VA D+ YN I+ L + + L ++ G+ PD T + + + G++ +A
Sbjct: 415 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAA 474
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGW 277
+ + D GL + V++ + ++ A S+F + VL +V T + I G
Sbjct: 475 KYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGL 534
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G+V E +V E+ +G PD T+S LI G + G ++ A E+ D M KG P+
Sbjct: 535 LKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 594
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YNA++ GD K + GM EP+ TY+ +I G KS VA+A +F E
Sbjct: 595 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 654
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M +G+ P + + + C G AM ++++ + G +L+ L + G+ K
Sbjct: 655 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTL----IDGYCK 710
Query: 458 CGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+ + L+ EM D Y VI C G++E A L+ +E + +
Sbjct: 711 SCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVT 770
Query: 515 YSKLS---NKLLASNKLESAYNLFRKI 538
Y+ L NKL S+++ + LF K+
Sbjct: 771 YTSLMYGYNKLGQSSEV---FALFEKM 794
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 172/356 (48%), Gaps = 2/356 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+L M+ GV PD+ + ++ +AG++ +A L ++ GLK DA + +
Sbjct: 406 LLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYS 465
Query: 245 QRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ + A+ F+ M L N Y ++I+G K G ++E + + + A G PD
Sbjct: 466 KTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQ 525
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T S I GL + GR+ +A++VF +KEKG PD Y+++IS + G+ ++ + + M
Sbjct: 526 TCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEM 585
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
PN+ Y L+ GL KS + A ++F+ M ++G+ P + T ++ ++ C
Sbjct: 586 CLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENV 645
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A ++ + G + Y L+ G ++L+ EM + G+ + + +
Sbjct: 646 AEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTL 704
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I G C +++ A + +E + K P + Y+ + + + K+E A LF++++
Sbjct: 705 IDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 760
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 197/437 (45%), Gaps = 15/437 (3%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
+L +++G+G+ DA+ L GK+ +F+ + H + +
Sbjct: 440 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK--------YFDEMLDH-GLMPNNP 490
Query: 165 SYNVIVKALGRRKFFDFM--CNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
Y V++ G K + M ++ + GV PD++T S + ++ G+V +A+++
Sbjct: 491 LYTVLIN--GHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFS 548
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
L++ GL D + + ++ C++ V A L + M K + N+ YN ++ G K G
Sbjct: 549 ELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSG 608
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ ++ + +G PDS+T+S +I+G ++ + +A +F M KG P + YN
Sbjct: 609 DIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYN 668
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A++ GD ++ M ++ M + ++ LI G KS K+ +A ++F+EM+ +
Sbjct: 669 ALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAK 727
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
I+P T T+ ++ C G A +++K+ ++ + Y L+ + G+ +
Sbjct: 728 QIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEV 787
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+ +M G D Y VI C L A + +E + KG ++ L
Sbjct: 788 FALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITA 847
Query: 522 LLASNKLESAYNLFRKI 538
L L A L ++
Sbjct: 848 LCKREDLTEASKLLDEM 864
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 175/424 (41%), Gaps = 71/424 (16%)
Query: 183 CNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWC 242
CN L M ++G+ P+ T +I+ RA ++ +A ++ GLK D + + ++
Sbjct: 194 CNSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDG 253
Query: 243 LCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
+ + + + M + N++TYN++I G K G++ + +LK ++ G P+
Sbjct: 254 FMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPN 313
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEK------------------------------ 331
S TF LIEG R + A+E+ D M+++
Sbjct: 314 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 373
Query: 332 -----GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
G P+ Y+ +I Y S G +E + GMS P++ Y +IS L K+
Sbjct: 374 KMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAG 433
Query: 387 KVADA----LEV-------------------------------FEEMLDRGIVPSTGTIT 411
K+ +A LE+ F+EMLD G++P+ T
Sbjct: 434 KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYT 493
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
+ G A+ +++ +G + + L G+ L ++ E++E
Sbjct: 494 VLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 553
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G D Y +I+G C G++E A + +E KG P+ +Y+ L + L S ++ A
Sbjct: 554 GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRA 613
Query: 532 YNLF 535
LF
Sbjct: 614 RKLF 617
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 186/468 (39%), Gaps = 75/468 (16%)
Query: 127 LSLDVVGKVVNRGNLSGEAMVL-FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNV 185
L+ DV+ V+++ + +L FF W+ V + + S++++ L + F V
Sbjct: 67 LNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGV 126
Query: 186 LSDMAKE-------------------GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
L+ M + G +P + I++DS+ R G + +A +
Sbjct: 127 LTQMIRTPYSSSSILDSVLFWFRNYGGSSPVV--FDILIDSYKRMGMLDEAANVF----- 179
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVE 285
F K D+ ++++ C L SM K L N TY I+ +G + ++ E
Sbjct: 180 FVAKNDSILISLIR---CNSLR---------SMGEKGLVPNTYTYTIITAGLCRAKRMNE 227
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+ +E+ G PD S LI+G R G ID+ + + D M G + YN +I
Sbjct: 228 AKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIH 287
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
G ++ + KGM + C+PN T+ LI G + + ALE+ +EM R +VP
Sbjct: 288 GLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVP 347
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL-------------RRL 452
S + + + LC A + +K G K ++ Y L+ R L
Sbjct: 348 SAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLL 407
Query: 453 SGFGKCGMLLDLWH----------------------EMQESGYPSDGEIYEYVIAGLCNI 490
G G+ D++ E+Q G D + I G
Sbjct: 408 DGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKT 467
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G++ A +E L G P+ +Y+ L N + L A ++FR +
Sbjct: 468 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHL 515
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 150/307 (48%), Gaps = 16/307 (5%)
Query: 159 VAKDVKSYNVIVKALGR-------RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
+A ++ YN +V L + RK FD M ++G+ PD T S ++D + ++
Sbjct: 590 IAPNIFIYNALVDGLCKSGDIQRARKLFD-------GMPEKGLEPDSVTYSTMIDGYCKS 642
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYN 271
V +A + + G++ + N ++ C+ + A +LF M K +++N
Sbjct: 643 ENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFN 702
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I G+ K ++ E ++ +E++A+ PD +T++ +I+ +AG++++A +F M+E+
Sbjct: 703 TLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQER 762
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
DT Y +++ Y +G E ++ M + +P+ TY +I K + +A
Sbjct: 763 NLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEA 822
Query: 392 LEVFEEMLDRGIVPSTGTITSFL-EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
++ +E++ +G++ + GTI L LC A + + ++G K SL A L+R
Sbjct: 823 FKLRDEVVGKGML-TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVR 881
Query: 451 RLSGFGK 457
GK
Sbjct: 882 SFHEAGK 888
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 104/236 (44%), Gaps = 1/236 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S+N ++ + + +M + + PD T + V+D +AG++ +A + +
Sbjct: 700 SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEM 759
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
++ L D + +++ + +LF M K V + +TY +VI K +
Sbjct: 760 QERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNL 819
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
VE ++ E+V +G LI L + + +A ++ D M E G P A + +
Sbjct: 820 VEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTL 879
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
+ ++ G DE + ++G+ S P+ T L++G L DA + ++++
Sbjct: 880 VRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 188/424 (44%), Gaps = 34/424 (8%)
Query: 124 NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRR------- 176
+ LS V+ ++ RG HP DV + ++K L R
Sbjct: 119 QITLSFSVLATILKRG---------------YHP----DVITLTTLIKGLCLRGEVKKAL 159
Query: 177 KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESL 236
KF D D+ D + +++ + G+ AIQ++ LE+ +K D
Sbjct: 160 KFHD-------DVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMY 212
Query: 237 NVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
N+++ LC+ VG A +L++ M K ++ NV+TY +I G+ +G ++E +L E+
Sbjct: 213 NIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKL 272
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+ +PD TFS LI+ LG+ G++ A V M + PD YN+++ Y V +
Sbjct: 273 KNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKH 332
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+ M+ P + +YT +I GL K++ V +A+ +FEEM + ++P+T T S ++
Sbjct: 333 AKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLID 392
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
LC G + K R + Y L+ L + L+ +M
Sbjct: 393 GLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQP 452
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
D Y +I GLC G+L+ A V + L KG+ Y+ + + + + A L
Sbjct: 453 DMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALL 512
Query: 536 RKIK 539
K++
Sbjct: 513 SKME 516
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 134/297 (45%), Gaps = 38/297 (12%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ L +K N+ DV ++++++ ALG+ VL+ M K V PD+ T +
Sbjct: 262 EAVALLNEMKLK--NINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNS 319
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
++D + +V A + + G+ +S +++ LC+ V A SLF MK K
Sbjct: 320 LVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKN 379
Query: 263 VLFNVMTYNIVISGWSKLGQV------VEMER---------------------------- 288
V+ N +T+N +I G K G++ V+ R
Sbjct: 380 VIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAI 439
Query: 289 -VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
+ K+++ + PD T++ LI+GL + GR+ A EVF + KG D Y +IS +
Sbjct: 440 ALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGF 499
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
G FDE + M C PN T+ +I L + + A ++ EM+ RG++
Sbjct: 500 CKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGLL 556
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 165/403 (40%), Gaps = 36/403 (8%)
Query: 137 NRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNP 196
N N +A+ LF + P +N I+ +L + + F ++ + +G+
Sbjct: 45 NNHNDHNDAVALFNRMLLMRP--PPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITS 102
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
DL TL+I+++ F GQ+ + +L + G D +L ++ LC R
Sbjct: 103 DLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLR---------- 152
Query: 257 NSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
G+V + + ++VA F D +++ LI GL + G
Sbjct: 153 ------------------------GEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIG 188
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
AI++ ++E+ PD YN +I + E Y M++ PN+ TYT
Sbjct: 189 ETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYT 248
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
LI G + +A+ + EM + I P T + ++ L G AA ++ K
Sbjct: 249 TLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKA 308
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
K + Y L+ + +++ M +SG + Y +I GLC ++ A
Sbjct: 309 YVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEA 368
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + EE K P+ + ++ L + L S ++ ++L K++
Sbjct: 369 ISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMR 411
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 90/226 (39%)
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
+DA+ +F+ M P T +N ++S+ + + F + K + ++ T L
Sbjct: 51 NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I+ ++ + V +L RG P T+T+ ++ LC G A+ + +
Sbjct: 111 INCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEF 170
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+L +Y L+ L G+ + L ++E D +Y +I LC + A
Sbjct: 171 QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACN 230
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
+ E K P+ + Y+ L L A L ++K+ N
Sbjct: 231 LYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNIN 276
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 177/381 (46%), Gaps = 5/381 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+ D +YN I+ AL + + D VL+ M V P+ T + +M + +GQ KAI
Sbjct: 42 VSPDAVTYNSIIAALSKAQAMDRAMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAI 97
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
+ ++ G++ D + N ++ LC+ A +F+SM + L ++ TY ++ G+
Sbjct: 98 GIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGY 157
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G +VEM +L +V G D F+ LI + ++D+ + VF M+++G P+
Sbjct: 158 ASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNA 217
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y VI +G D+ M ++ M PN+ YT LI L K A E+ E
Sbjct: 218 VNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFE 277
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+LD+GI P+ + L+ LC G + ++ +G + Y L+ GK
Sbjct: 278 ILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGK 337
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+ L M G D Y +I G C I ++E+A+ + +E G P + Y+
Sbjct: 338 MDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNI 397
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ + L + + +A L+ +I
Sbjct: 398 ILHGLFRTRRTAAAKELYARI 418
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 169/387 (43%), Gaps = 39/387 (10%)
Query: 189 MAKEG-VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
MA +G PD+ + + ++D + G V KA + D + DA + N ++ L +
Sbjct: 1 MADDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQ 60
Query: 248 HVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ A + M V+ N TYN ++ G+ GQ + + +++ ++G PD +T++
Sbjct: 61 AMDRAMEVLTVM---VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNS 117
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF-------------- 353
L++ L + G+ +A ++FD+M ++G PD Y ++ Y S G
Sbjct: 118 LMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNG 177
Query: 354 ---------------------DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
DE + + M PN Y +I GL K ++ DA+
Sbjct: 178 MQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAM 237
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
FE+M+D+G+ P+ TS + LC+Y A + + G ++ + +L L
Sbjct: 238 LNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSL 297
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G+ L+ + G D Y +I G C G+++ A+ ++ + G P
Sbjct: 298 CKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDS 357
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKIK 539
+ YS L N N++E A LF++++
Sbjct: 358 VTYSTLINGYCKINRMEDALALFKEME 384
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 148/334 (44%), Gaps = 50/334 (14%)
Query: 159 VAKDVKSYNVIVKALGR-------RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
+ DV +YN ++ L + RK FD M K G+ PD+ T ++ +
Sbjct: 108 IEPDVVTYNSLMDYLCKNGKCTEARKIFD-------SMVKRGLKPDITTYGTLLHGYASK 160
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTY 270
G + + +L + G++ D N+++ ++ V +F+ M+ + L N + Y
Sbjct: 161 GALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNY 220
Query: 271 NIVISGWSKLG----------QVVE-------------------------MERVLKEIVA 295
VI G KLG Q+++ E ++ EI+
Sbjct: 221 RTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILD 280
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+G +P+ + F+ +++ L + GR+ ++ ++FD + G PD Y+ +I Y G D
Sbjct: 281 QGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDG 340
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
MK GM S +P+ TY+ LI+G K ++ DAL +F+EM G+ P T L
Sbjct: 341 AMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILH 400
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
L AA +Y + + G +L L+ Y ++L
Sbjct: 401 GLFRTRRTAAAKELYARITESGTQLELSTYNIIL 434
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 105/208 (50%), Gaps = 14/208 (6%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRR-KFFDFMCNVLSDMAKEGVNPDLETLS 202
+ +VL F+ ++ + + +Y ++ L + + D M N M +G+ P++
Sbjct: 199 DEVVLVFS-KMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLN-FEQMIDKGLTPNV---- 252
Query: 203 IVMDSFIRAGQVY----KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
+V S I A Y KA +++ + D G+ + N +L LC+ V + LF+
Sbjct: 253 VVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFD- 311
Query: 259 MKGKVLFN--VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
+ G + N V+TY+ +I G+ G++ ++L +V+ G PDS+T+S LI G +
Sbjct: 312 LLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKIN 371
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
R++DA+ +F M+ G PD YN ++
Sbjct: 372 RMEDALALFKEMESNGVNPDIITYNIIL 399
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 173/333 (51%), Gaps = 1/333 (0%)
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK 262
I+++ + G+ AI++L R+E + ++ + ++++ LC+ V A L+ M GK
Sbjct: 168 ILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGK 227
Query: 263 -VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
+ +V+TY+I++SG+ +GQ+ +L E+V E +PD T++ L++ L + G++ +A
Sbjct: 228 GISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEA 287
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
V M + D Y+ ++ Y V + + + + M+ P++ Y+ +I+G
Sbjct: 288 ENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMING 347
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L K ++V +AL +FEE+ + +VP T T TS ++ LC G ++ + G
Sbjct: 348 LCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPD 407
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ Y L+ L G + L+++M++ + + ++ GLC +G+L+NA+ +
Sbjct: 408 VITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQ 467
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
+ L KG+C + Y+ + N L L+ A L
Sbjct: 468 DLLTKGYCLNVRTYTVMINGLCKEGLLDEALAL 500
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 180/391 (46%), Gaps = 40/391 (10%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
W+I+ PNV Y++I+ L + D ++ ++M +G++PD+ T SI++ F
Sbjct: 192 WSIR-PNVV----IYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIV 246
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYN 271
GQ+ +AI +L + E++N ++ TY
Sbjct: 247 GQLNRAIDLLNEMV-------LENINP---------------------------DIYTYT 272
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
I++ K G+V E E VL +V + D + +S L++G +++A VF TM +
Sbjct: 273 ILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQM 332
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G PD + Y+ +I+ + DE + ++ + N P+ TYT LI L KS +++
Sbjct: 333 GVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYV 392
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
++F+EMLDRG P T + ++ LC G A+ ++ K + + ++ + +LL
Sbjct: 393 WDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDG 452
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L G+ L+ + ++ GY + Y +I GLC G L+ A+ + G
Sbjct: 453 LCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISD 512
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+ + + ++ + A L R++ IAR
Sbjct: 513 AVTFEIMIRAFFDKDENDKAEKLVREM-IAR 542
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 173/385 (44%), Gaps = 1/385 (0%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H + +N I+ +L K + ++ M V PD TL+I+++ F GQV
Sbjct: 51 HVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVV 110
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVI 274
A + ++ G + + +LN ++ LC V A + + + + ++Y I+I
Sbjct: 111 LAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILI 170
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G K+G+ R+L+ I P+ + +S +I+ L + +D+A +++ M KG
Sbjct: 171 NGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGIS 230
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD Y+ ++S + VG + + M N P++ TYT L+ L K KV +A V
Sbjct: 231 PDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENV 290
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
M+ + ++ ++ C + A ++ ++G + Y +++ L
Sbjct: 291 LAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCK 350
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+ L+L+ E+ + D Y +I LC G++ + +E L +G P +
Sbjct: 351 IKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVIT 410
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
Y+ L + L + L+ A LF K+K
Sbjct: 411 YNNLIDALCKNGHLDRAIALFNKMK 435
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 152/375 (40%), Gaps = 51/375 (13%)
Query: 81 NSVKRIDSSRAVDEFLLPEER--LR-GVFLQKLKGKGVIEDALWNVNVDLSLDVVGK--- 134
N V +I +RA L ER +R V + + + +D L + DL ++VGK
Sbjct: 171 NGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGIS 230
Query: 135 --VVNRGNL-SGEAMVLFFNWAIKH------PNVAKDVKSYNVIVKALGRRKFFDFMCNV 185
VV L SG +V N AI N+ D+ +Y ++V AL + NV
Sbjct: 231 PDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENV 290
Query: 186 LSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
L+ M K VN D+ S +MD + +V A ++ + G+ D ++++ LC+
Sbjct: 291 LAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCK 350
Query: 246 RLHVGAASSLFNSMKGKVLF------------------------------------NVMT 269
V A +LF + K + +V+T
Sbjct: 351 IKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVIT 410
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
YN +I K G + + ++ + P+ TF+ L++GL + GR+ +A+E F +
Sbjct: 411 YNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLL 470
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
KG + Y +I+ G DE + M C + T+ +I +
Sbjct: 471 TKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDEND 530
Query: 390 DALEVFEEMLDRGIV 404
A ++ EM+ RG++
Sbjct: 531 KAEKLVREMIARGLL 545
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%)
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
DDA+ F+ M P T +N ++ + ++V + + YK M EP+ T +
Sbjct: 40 DDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNII 99
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I+ +V A ++L G P+T T+ + ++ LC G A+ + K G
Sbjct: 100 INCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGF 159
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+LS +Y +L+ + G+ + L ++ + IY +I LC ++ A
Sbjct: 160 RLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYD 219
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
+ E + KG P + YS L + +L A +L ++ + N
Sbjct: 220 LYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENIN 265
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 189/406 (46%), Gaps = 8/406 (1%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FF WA + +S ++I L + + C L + G+ + +++ +
Sbjct: 78 FFIWASNFKRF-RAWESCDLITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVY 136
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNV 267
++ G KA++ G + DF D + N++L L Q+ + A +++ M K L NV
Sbjct: 137 LKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNV 196
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
T++I+I G K G V + + E+ G PD+ T+ +I GL R+ R+DDA +FD
Sbjct: 197 ATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDK 256
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
MK+ G GPD NA+++ + + DE + ++ Y+ LI GL ++++
Sbjct: 257 MKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKR 316
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
D ++ +M++ + P T ++ L G A+ + + + G Y +
Sbjct: 317 YEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNV 376
Query: 448 LLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
L++ GF G+L + L E+ + + Y +I+G+C G +A + E
Sbjct: 377 LIK---GFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEME 433
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYARRL 550
+ G PS + ++ L + L + +LE A+ LF K++I R RL
Sbjct: 434 KLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRL 479
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/504 (24%), Positives = 204/504 (40%), Gaps = 90/504 (17%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
V+ KV + L+ +AM F +++ + DV +YN+I+ L ++ F V + M
Sbjct: 131 VLIKVYLKMGLTDKAMETF--GSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMM 188
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
K P++ T SI++D ++G V A+ + + G+ DA + VV+ LC+ V
Sbjct: 189 KLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVD 248
Query: 251 AASSLFNSMK-------------------------------------GKVLFNVMTYNIV 273
A LF+ MK G VL +V Y+ +
Sbjct: 249 DAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVL-DVRGYSCL 307
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
I G + + +++ + ++++ + PD ++ +++GL AG++ DA+E+ + M E G
Sbjct: 308 IRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGV 367
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
PDT YN +I + +G E +S ++C PN+ TY+ LISG+ ++ DA E
Sbjct: 368 VPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQE 427
Query: 394 VFEEMLDRGIVPSTGTITSFL--------------------------------------- 414
+F EM G PS T S +
Sbjct: 428 IFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVL 487
Query: 415 ---------EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
E LC G H A + + G + Y +L+ G L+
Sbjct: 488 DSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLF 547
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
EMQ G D Y +I GL + E+A V ++ + G P VY + +
Sbjct: 548 REMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRR 607
Query: 526 NKLESAYNLFRKI--KIARQNDYA 547
+L A++L+ K I Q D A
Sbjct: 608 MELPRAFSLWLKYLRNIRSQEDEA 631
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 149/337 (44%), Gaps = 36/337 (10%)
Query: 90 RAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVV----------NRG 139
+ +++ + P+ L + ++ L G + DAL +N VV V + G
Sbjct: 326 KMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMG 385
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
LS EA L I + +VK+Y++++ + R + ++M K G P
Sbjct: 386 LLS-EARSL--QLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAV 442
Query: 200 TLSIVMDSFIRAGQVYKAIQM-----LGRLEDFGLKF--------DAESLNVVLWCLCQR 246
T + ++D + GQ+ KA + +GR L+ D+ SL ++ LC
Sbjct: 443 TFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDS 502
Query: 247 LHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
+ A + + + TYNI+++G+ KLG ++ +E+ +G SPD++T+
Sbjct: 503 GLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTY 562
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD----FDECMKYYK 361
LI GL R R +DA +VFD M++ GC PD Y +++ + F +KY +
Sbjct: 563 GTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLR 622
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
+ S D + I G + ++V A+ EM
Sbjct: 623 NIRSQE-----DEAIKAIEGYFEKQEVEKAVRGLLEM 654
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/391 (19%), Positives = 158/391 (40%), Gaps = 39/391 (9%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D YNV++K ++ ++++ P+++T SI++ R G A
Sbjct: 367 VVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQ 426
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQ------------RLHVGAASSLFN--SMKGKVL 264
++ +E G A + N ++ LC+ ++ +G SLF S +
Sbjct: 427 EIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHV 486
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+ + ++ G + + R+L ++ G +P T++ L+ G + G + A ++
Sbjct: 487 LDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKL 546
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F M+ KG PDT Y +I+ + ++ K + M C P+ Y +++ + +
Sbjct: 547 FREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCR 606
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS--- 441
++ A ++ + L R I +E Y + ++ KL+
Sbjct: 607 RMELPRAFSLWLKYL-RNIRSQEDEAIKAIE---GYFEKQEVEKAVRGLLEMDFKLNDFD 662
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI---------GQ 492
L Y + L L + G L ++ ++E Y+ VI C + G
Sbjct: 663 LGPYAIWLIGLCQTRRVGEALKIFLILEE---------YKVVITPPCCVKLIYFLLKEGD 713
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L+ A+ V ++ KG+ R V +++ KL+
Sbjct: 714 LDRAIDVFLYTIEKGYLLRRRVANRILTKLV 744
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 182/417 (43%), Gaps = 42/417 (10%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV SY+ +V R D + ++ M ++G+ P+ ++ R ++ +A +
Sbjct: 723 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 782
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ G+ D ++ C+R + AAS F M + + +V+TY +ISG+ ++
Sbjct: 783 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 842
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G +VE ++ E+ +G PDS+TF+ LI G +AG + DA V + M + GC P+ Y
Sbjct: 843 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 902
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+I GD D + M +PN+ TY +++GL KS + +A+++ E
Sbjct: 903 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 962
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ T T T+ ++ C G A + K+ G + ++ + +L+ +GF GM
Sbjct: 963 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM---NGFCLHGM 1019
Query: 461 LLD--------------------------------------LWHEMQESGYPSDGEIYEY 482
L D ++ +M G DG+ YE
Sbjct: 1020 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 1079
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ G C ++ A + +E KGF S YS L L K A +F +++
Sbjct: 1080 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 1136
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 203/451 (45%), Gaps = 13/451 (2%)
Query: 99 EERLRGVFLQKLKGKGVIEDA------LWNVNVDLSLDVVGKVVNRGNL----SGEAMVL 148
+ R+ VF Q L G++ +A + N + LS+D + R + + A+++
Sbjct: 617 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 676
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F + V +V SYN+++ + + ++L M +G PD+ + S V++ +
Sbjct: 677 FREFP--EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 734
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNV 267
R G++ K +++ ++ GLK ++ ++ LC+ + A F+ M + +L +
Sbjct: 735 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT 794
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+ Y +I G+ K G + + E+ + +PD LT++ +I G + G + +A ++F
Sbjct: 795 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 854
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M KG PD+ + +I+ Y G + + + M C PN+ TYT LI GL K
Sbjct: 855 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 914
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ A E+ EM G+ P+ T S + LC G A+ + + G Y
Sbjct: 915 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 974
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L+ G+ ++ EM G + ++ G C G LE+ ++ L KG
Sbjct: 975 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1034
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ ++ L + N L++A +++ +
Sbjct: 1035 IAPNATTFNSLVKQYCIRNNLKAATAIYKDM 1065
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 156/366 (42%), Gaps = 7/366 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D Y ++ +R +M + PD+ T + ++ F + G + +A
Sbjct: 790 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 849
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ + GL+ D+ + ++ C+ H+ A + N M + NV+TY +I G
Sbjct: 850 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 909
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G + +L E+ G P+ T++ ++ GL ++G I++A+++ + G DT
Sbjct: 910 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 969
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y ++ Y G+ D+ + K M +P + T+ L++G + D ++
Sbjct: 970 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 1029
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
ML +GI P+ T S ++ C AA +YK G Y+ L++ G K
Sbjct: 1030 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK---GHCK 1086
Query: 458 CGMLLDLW---HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+ + W EM+ G+ Y +I G + A V ++ R+G + +
Sbjct: 1087 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEI 1146
Query: 515 YSKLSN 520
+ S+
Sbjct: 1147 FDFFSD 1152
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 160/337 (47%), Gaps = 7/337 (2%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F + + ++ DV +Y I+ + + +M +G+ PD T + +++ +
Sbjct: 816 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 875
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVM 268
+AG + A ++ + G + + ++ LC+ + +A+ L + M K + N+
Sbjct: 876 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 935
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TYN +++G K G + E +++ E A G + D++T++ L++ ++G +D A E+ M
Sbjct: 936 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 995
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
KG P +N +++ + G ++ K M + PN T+ L+ +
Sbjct: 996 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 1055
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A ++++M RG+ P T + ++ C A ++++ + G +S++ Y +L
Sbjct: 1056 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 1115
Query: 449 LRRLSGFGKCGMLL---DLWHEMQESGYPSDGEIYEY 482
++ GF K L +++ +M+ G +D EI+++
Sbjct: 1116 IK---GFLKRKKFLEAREVFDQMRREGLAADKEIFDF 1149
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 123/283 (43%), Gaps = 6/283 (2%)
Query: 124 NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIK-HPNVAKDVKSYNVIVKALGRRKFFDFM 182
NV ++ + G+L +L W I PN+ +YN IV L + +
Sbjct: 898 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF----TYNSIVNGLCKSGNIEEA 953
Query: 183 CNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWC 242
++ + G+N D T + +MD++ ++G++ KA ++L + GL+ + NV++
Sbjct: 954 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 1013
Query: 243 LCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
C + L N M K + N T+N ++ + + + K++ + G PD
Sbjct: 1014 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 1073
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
T+ L++G +A + +A +F MK KG + Y+ +I ++ F E + +
Sbjct: 1074 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 1133
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
M + + + K ++ ++ +E+++ +V
Sbjct: 1134 QMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 1176
>gi|115480461|ref|NP_001063824.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|32526676|dbj|BAC79199.1| chloroplast RNA processing 1 -like protein [Oryza sativa Japonica
Group]
gi|113632057|dbj|BAF25738.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|125606498|gb|EAZ45534.1| hypothetical protein OsJ_30195 [Oryza sativa Japonica Group]
gi|215768653|dbj|BAH00882.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 543
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 184/375 (49%), Gaps = 8/375 (2%)
Query: 147 VLFFNWAIKHPNVAKDVKS--YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIV 204
V FF+ + P++ D Y ++ L + F ++L +M + V + + +
Sbjct: 128 VAFFHHVL--PSLPPDSLPALYAAMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILAL 185
Query: 205 MDSFIRAGQVYKAIQMLGRLEDFGL-KFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
+ ++RA +A + R+E++G D +L +L L ++ A ++F+S K
Sbjct: 186 IRRYVRAEMPSEASDLFRRMEEYGAGAPDPATLASLLGALSKKRLASEAQAMFDSYKSVF 245
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+V+ Y ++ W + G++ E ERV E+ G +P+ T++ +I+ + RAG++ A E
Sbjct: 246 TPDVVLYTTLVHAWCRSGRLNEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQE 305
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI-SGL 382
+ M + GC P+T +NA++ ++ G ++ ++ + M CEP++ TY L+ +
Sbjct: 306 LLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHC 365
Query: 383 LKSRKVAD-ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
K + D A+++ M+ +G +P T L+ + G +AA +Y++ +++ CK +
Sbjct: 366 GKGQSNLDAAMKMLTRMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPN 425
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ Y LL+R + M+L + +M G + Y +I C G + A + +
Sbjct: 426 VVTYNLLMRLFNLEKSMDMVLRIKKDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTLR 485
Query: 502 ESL-RKGFCPSRLVY 515
E + K P++ VY
Sbjct: 486 EMVEEKALKPTKPVY 500
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 166/359 (46%), Gaps = 47/359 (13%)
Query: 135 VVNRGNLSGEAMVLFFNW-AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG 193
+++ L+ EA +F ++ ++ P DV Y +V A R + V ++M + G
Sbjct: 224 ALSKKRLASEAQAMFDSYKSVFTP----DVVLYTTLVHAWCRSGRLNEAERVFAEMQQAG 279
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAAS 253
V P++ T + V+D+ RAGQV +A ++L ++ D G + + N ++ R HV A
Sbjct: 280 VTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIM-----RAHVKAGR 334
Query: 254 SLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE--- 310
S QV+++ ++++ G PD +T++FL+E
Sbjct: 335 S--------------------------EQVLQVHNQMRQL---GCEPDIITYNFLMETHC 365
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
G G++ +D A+++ M KGC PD + +N ++ + +G+ + K Y+ M C+P
Sbjct: 366 GKGQSN-LDAAMKMLTRMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKP 424
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP-PHAAMMM 429
N+ TY L+ + + L + ++M +G+ P+ T + +E C G A M +
Sbjct: 425 NVVTYNLLMRLFNLEKSMDMVLRIKKDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHMTL 484
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY---PSDGEIYEYVIA 485
+ + K + Y ++L L G+ +L M + G+ P++ ++ + A
Sbjct: 485 REMVEEKALKPTKPVYDMVLALLRKAGQLRRHEELVEMMVDRGFISRPANDALWRAISA 543
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 182/417 (43%), Gaps = 42/417 (10%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV SY+ +V R D + ++ M ++G+ P+ ++ R ++ +A +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ G+ D ++ C+R + AAS F M + + +V+TY +ISG+ ++
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G +VE ++ E+ +G PDS+TF+ LI G +AG + DA V + M + GC P+ Y
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+I GD D + M +PN+ TY +++GL KS + +A+++ E
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ T T T+ ++ C G A + K+ G + ++ + +L+ +GF GM
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM---NGFCLHGM 576
Query: 461 LLD--------------------------------------LWHEMQESGYPSDGEIYEY 482
L D ++ +M G DG+ YE
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ G C ++ A + +E KGF S YS L L K A +F +++
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 205/454 (45%), Gaps = 19/454 (4%)
Query: 99 EERLRGVFLQKLKGKGVIEDA------LWNVNVDLSLDVVGKVVNRGNL----SGEAMVL 148
+ R+ VF Q L G++ +A + N + LS+D + R + + A+++
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 149 FFNWAIKHPNVAKDVKSYNVIVK---ALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
F + V +V SYN+++ LGR K ++L M +G PD+ + S V+
Sbjct: 234 FREFP--EVGVCWNVASYNIVIHFVCQLGRIKEAH---HLLLLMELKGYTPDVISYSTVV 288
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVL 264
+ + R G++ K +++ ++ GLK ++ ++ LC+ + A F+ M + +L
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+ + Y +I G+ K G + + E+ + +PD LT++ +I G + G + +A ++
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F M KG PD+ + +I+ Y G + + + M C PN+ TYT LI GL K
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+ A E+ EM G+ P+ T S + LC G A+ + + G
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y L+ G+ ++ EM G + ++ G C G LE+ ++ L
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
KG P+ ++ L + N L++A +++ +
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 156/366 (42%), Gaps = 7/366 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D Y ++ +R +M + PD+ T + ++ F + G + +A
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ + GL+ D+ + ++ C+ H+ A + N M + NV+TY +I G
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G + +L E+ G P+ T++ ++ GL ++G I++A+++ + G DT
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y ++ Y G+ D+ + K M +P + T+ L++G + D ++
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
ML +GI P+ T S ++ C AA +YK G Y+ L++ G K
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK---GHCK 643
Query: 458 CGMLLDLW---HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+ + W EM+ G+ Y +I G + A V ++ R+G + +
Sbjct: 644 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEI 703
Query: 515 YSKLSN 520
+ S+
Sbjct: 704 FDFFSD 709
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 160/337 (47%), Gaps = 7/337 (2%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F + + ++ DV +Y I+ + + +M +G+ PD T + +++ +
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVM 268
+AG + A ++ + G + + ++ LC+ + +A+ L + M K + N+
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TYN +++G K G + E +++ E A G + D++T++ L++ ++G +D A E+ M
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
KG P +N +++ + G ++ K M + PN T+ L+ +
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A ++++M RG+ P T + ++ C A ++++ + G +S++ Y +L
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Query: 449 LRRLSGFGKCGMLL---DLWHEMQESGYPSDGEIYEY 482
++ GF K L +++ +M+ G +D EI+++
Sbjct: 673 IK---GFLKRKKFLEAREVFDQMRREGLAADKEIFDF 706
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 123/283 (43%), Gaps = 6/283 (2%)
Query: 124 NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIK-HPNVAKDVKSYNVIVKALGRRKFFDFM 182
NV ++ + G+L +L W I PN+ +YN IV L + +
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF----TYNSIVNGLCKSGNIEEA 510
Query: 183 CNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWC 242
++ + G+N D T + +MD++ ++G++ KA ++L + GL+ + NV++
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 243 LCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
C + L N M K + N T+N ++ + + + K++ + G PD
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
T+ L++G +A + +A +F MK KG + Y+ +I ++ F E + +
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
M + + + K ++ ++ +E+++ +V
Sbjct: 691 QMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 733
Score = 38.5 bits (88), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS-GFGKCGMLLDLWHEMQES 471
F + L +G A +++K G LS+ + + L RLS K + ++ E E
Sbjct: 181 FFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEV 240
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENA---VLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
G + Y VI +C +G+++ A +L+ME KG+ P + YS + N +L
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME---LKGYTPDVISYSTVVNGYCRFGEL 297
Query: 529 ESAYNLFRKIK 539
+ + L +K
Sbjct: 298 DKVWKLIEVMK 308
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 193/396 (48%), Gaps = 4/396 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EAM LF +K + V++Y V++KAL + N++ +M ++G+ P++ T ++
Sbjct: 306 EAMDLFVK--MKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTV 363
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++DS ++ KA ++LG++ + GL + + N ++ C+R + A + M+ +
Sbjct: 364 LIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRN 423
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
L N TYN +I G+ K V + VL +++ PD +T++ LI+G R+G D A
Sbjct: 424 LRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+ M ++G PD Y ++I + +E + + + PN+ YT LI G
Sbjct: 483 RLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGY 542
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K+ KV +A + E+ML + +P++ T + + LC+ G A ++ +K K+ + ++
Sbjct: 543 CKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTV 602
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
+ +L+ RL G + +M SG D Y I C G+L++A ++ +
Sbjct: 603 STDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAK 662
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P YS L + SA+ + +++
Sbjct: 663 MKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRM 698
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 175/407 (42%), Gaps = 32/407 (7%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
+L + + F +W ++P V SY ++ L + + + M K
Sbjct: 100 DLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKS------- 152
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
DS V + + + E F LK+ +++ C L+ A L + M
Sbjct: 153 -----CDSVADTLFVLDLCRKMNKDESFELKY-----KLIIGCYNTLLNSLARFGLVDEM 202
Query: 260 K--------GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
K KV N+ TYN +++G+ K+G V E + + IV G PD T++ LI G
Sbjct: 203 KQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMG 262
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
+ +D A +VF M KGC + AY +I DE M + M +C P
Sbjct: 263 YCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPT 322
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+ TYT LI L S + ++AL + +EM ++GI P+ T T ++ LCS A +
Sbjct: 323 VRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLG 382
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ + G ++ Y L ++G+ K GM+ LD+ M+ + Y +I G C
Sbjct: 383 QMLEKGLMPNVITYNAL---INGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYC 439
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ A+ V+ + L + P + Y+ L + S +SAY L
Sbjct: 440 K-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 171/397 (43%), Gaps = 20/397 (5%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D +Y ++ +L + K + C++ + ++ V P++ + ++D + +AG+V +A
Sbjct: 493 LVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAH 552
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
ML ++ ++ + N ++ LC + A+ L M K + V T I+I
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRL 612
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G R +++++ G PD+ T++ I+ R GR+ DA ++ MKE G PD
Sbjct: 613 LKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDL 672
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR--KVADA---- 391
Y+++I Y +G + K M CEP+ T+ LI LL+ + KV
Sbjct: 673 FTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGV 732
Query: 392 ------------LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK-ARKVGC 438
+E+ E+M++ G+ P+ + + +C G A ++ +K G
Sbjct: 733 CVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGI 792
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
S + LL K + +M G+ E + +I L G+ E
Sbjct: 793 SPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTS 852
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
V + L+ G+ L + + + + +E+ Y LF
Sbjct: 853 VFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELF 889
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 120/289 (41%), Gaps = 17/289 (5%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +Y ++ R ++++ M + GV+PDL T S ++ + G+ A +L
Sbjct: 636 DAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVL 695
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLG 281
R+ D G + S + L + L + V+ N+M ++IV+
Sbjct: 696 KRMHDTGCE---PSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVV------- 745
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK-GCGPDTNAY 340
+L+++V G +P++ ++ L+ G+ G + A +VFD M++K G P +
Sbjct: 746 ------ELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVF 799
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
NA++S + +E K M P +++ LI L K + VF+ +L
Sbjct: 800 NALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQ 859
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
G ++ + G A ++ K GC S Y LL+
Sbjct: 860 CGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLI 908
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 205/469 (43%), Gaps = 51/469 (10%)
Query: 107 LQKLKGKGVIEDALWNVNVDLS-LDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L+++ KG IE ++ V +S L +G+V + NL ++ + V++
Sbjct: 290 LEEMTEKG-IEPTVYTYTVPISSLCDIGRVDDAINLV---------RSMGKKGCSPSVQT 339
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y I+ L R + + M KEG+ P+ T + +++ G+ A+++ +E
Sbjct: 340 YTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWME 399
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------KGKVLFNVM----------- 268
G +A++ N ++ L + A +FN M V +N +
Sbjct: 400 GHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLN 459
Query: 269 -------------------TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
TY +ISG+ K G++ E++ G SP+ T++ +I
Sbjct: 460 NATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMI 519
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
+G + G+ID A+ +F+ M+E GC YNA+IS F E K+ M+ +
Sbjct: 520 DGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQ 579
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
PN TYT LI+GL K+ A ++F EM + +P+ T TS + LC G AA
Sbjct: 580 PNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA--- 636
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
++ + GC+ ++ Y L+ L G+ L M+E G EIY ++ C
Sbjct: 637 -ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCK 695
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+++ A+ + KGF P +Y L L ++ E A N+F+ +
Sbjct: 696 SLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSL 744
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 174/376 (46%), Gaps = 1/376 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S+N ++ LG+ NV + + GV P L T + +++ + G+V +A+ + ++
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
F L DA + ++ C+ + A +F+ M K N +TY+ +I+G G++
Sbjct: 224 FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRI 283
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E +L+E+ +G P T++ I L GR+DDAI + +M +KGC P Y A+
Sbjct: 284 GEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAI 343
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS G + + Y M PN TY LI+ L + AL++F+ M G
Sbjct: 344 ISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGT 403
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+ + T ++ L AM+++ K K G ++ Y L+ G
Sbjct: 404 LANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATR 463
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ M+ES D Y +I+G C G+L++A E L+ G P++ Y+ + +
Sbjct: 464 FLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYC 523
Query: 524 ASNKLESAYNLFRKIK 539
K++ A +LF +++
Sbjct: 524 KEGKIDVALSLFERME 539
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 193/446 (43%), Gaps = 43/446 (9%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
++ + N G + GEAM + K + V +Y V + +L D N++ M
Sbjct: 273 LINGLCNEGRI-GEAMDMLEEMTEK--GIEPTVYTYTVPISSLCDIGRVDDAINLVRSMG 329
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
K+G +P ++T + ++ RAG++ AI M ++ GL + + N ++ LC G
Sbjct: 330 KKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFG 389
Query: 251 AASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP--------- 300
A +F+ M+G L N TYN +I G + + + V +++ +G SP
Sbjct: 390 IALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLI 449
Query: 301 --------------------------DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
D T+ LI G + G++D A F M + G
Sbjct: 450 VENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGIS 509
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ Y A+I Y G D + ++ M C +++TY +ISGL K + ++A +
Sbjct: 510 PNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKF 569
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+M ++G+ P+T T TS + LC + A ++ + K C + Y L+ L
Sbjct: 570 CAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQ 629
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK +D + E+G + Y +++GLC G+ A ++E KG PS +
Sbjct: 630 EGK----VDAAERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEI 685
Query: 515 YSKLSNKLLASNKLESAYNLFRKIKI 540
Y L S K++ A +F + +
Sbjct: 686 YCSLLVAHCKSLKVDCALEIFNLMAV 711
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 181/427 (42%), Gaps = 37/427 (8%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+ VL FN I ++ D +Y ++ R + D V M K+G NP+ T S
Sbjct: 214 QEAVLVFN-KIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYST 272
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
+++ G++ +A+ ML + + G++ + V + LC V A +L SM K
Sbjct: 273 LINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKG 332
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+V TY +ISG + G++ + +++ EG P+++T++ LI L GR A+
Sbjct: 333 CSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIAL 392
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM------------------------- 357
++FD M+ G + YN +I + D ++ M
Sbjct: 393 KIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVEN 452
Query: 358 ----------KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
++ M NCEP+ TY LISG K K+ A F EML GI P+
Sbjct: 453 LKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQ 512
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T T+ ++ C G A+ ++++ + GC S+ Y ++ LS + +
Sbjct: 513 WTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAK 572
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
M E G + Y +I GLC A + E +K P+ Y+ L L K
Sbjct: 573 MTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGK 632
Query: 528 LESAYNL 534
+++A L
Sbjct: 633 VDAAERL 639
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 162/349 (46%), Gaps = 7/349 (2%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+AMV+F P + V +YN ++ +R + + L M + PD T
Sbjct: 425 KAMVVFNKMLKDGP--SPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCE 482
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GK 262
++ F + G++ A + G+ + + ++ C+ + A SLF M+
Sbjct: 483 LISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENG 542
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
++ TYN +ISG SK + E E+ ++ +G P+++T++ LI GL + + A
Sbjct: 543 CSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAF 602
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
++F M++K C P+ + Y ++I G D + ++ CEP +DTY+ L+SGL
Sbjct: 603 KIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAER----LTENGCEPTIDTYSTLVSGL 658
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+ + +A ++ E M ++G+ PS S L C A+ ++ G + L
Sbjct: 659 CREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHL 718
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
YK+L+ L G + L+++ + + + SD ++ ++ GL G
Sbjct: 719 FIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEG 767
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 131/274 (47%)
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
F + ++N ++ K V + V +I + G P LTF+ +I L + G++ +A+ V
Sbjct: 160 FTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLV 219
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F+ + + PD Y ++I + D+ + + M C PN TY+ LI+GL
Sbjct: 220 FNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCN 279
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
++ +A+++ EEM ++GI P+ T T + LC G A+ + + K GC S+
Sbjct: 280 EGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQT 339
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y ++ L GK + + ++H+M + G + Y +I LC G+ A+ + +
Sbjct: 340 YTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWME 399
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G + Y+++ L + +E A +F K+
Sbjct: 400 GHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKM 433
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 148/337 (43%), Gaps = 9/337 (2%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F + +K N D ++Y ++ + D + +M K G++P+ T + ++D +
Sbjct: 464 FLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYC 523
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVM 268
+ G++ A+ + R+E+ G E+ N ++ L + A M + L N +
Sbjct: 524 KEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTI 583
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TY +I+G K ++ E+ + P++ T++ LI GL + G++D A + +
Sbjct: 584 TYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERL 639
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
E GC P + Y+ ++S G +E + + M P+M+ Y L+ KS KV
Sbjct: 640 TENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKV 699
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
ALE+F M +G P + LC A+ +++ K L + +L
Sbjct: 700 DCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVL 759
Query: 449 LRRLSGFGKCGMLLDLWHEMQ-ESGYPSDGEIYEYVI 484
+ L G + + + M+ + PS ++ Y+I
Sbjct: 760 VDGLLQEGDSDLCMKFLYLMESRNCTPS---LHTYII 793
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/485 (23%), Positives = 210/485 (43%), Gaps = 78/485 (16%)
Query: 128 SLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLS 187
S D+V +++ GN A +F++ K V+ V ++ +++KAL D C++L
Sbjct: 185 SYDLVLEILVTGNCPQVATNVFYDMLSK--GVSPTVFTFGIVMKALCMFNEVDSACSLLR 242
Query: 188 DMAKEGVNPDLETLSIVMDSFIRA----GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
DM K G P+ SIV + I A QV +A+++L + G D ++ N V+ L
Sbjct: 243 DMTKHGCVPN----SIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGL 298
Query: 244 CQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEI--------- 293
C+ + A+ L + M + + + MTY ++ G ++G++ E ++L +I
Sbjct: 299 CKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILN 358
Query: 294 -----------------------VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
+ GF PD T++ L+ GL + G + A ++ + M
Sbjct: 359 TLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSR 418
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS---------YN-------------- 367
+GC P+ Y +++ G +E MS+ YN
Sbjct: 419 RGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHV 478
Query: 368 ------------CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
C+P++ TY LI GL K ++ +A +F ML G V + T + +
Sbjct: 479 ALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIH 538
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
L G A+ + GC L Y L++ G L+L+ +M G +
Sbjct: 539 ALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGA 598
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
D +I GLC +G+++NA + +++ +GF P + Y+ + N L +++ A NLF
Sbjct: 599 DTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLF 658
Query: 536 RKIKI 540
++++
Sbjct: 659 DRLQV 663
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 202/456 (44%), Gaps = 46/456 (10%)
Query: 87 DSSRAVDEFLL----PEERLRGVFLQKLKGKGVIEDALWNVNVDLSLD---VVGKVVNRG 139
D+++ VD LL P+ G L L G + +A + + + ++ ++N
Sbjct: 306 DATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEA-RKILIKIPCPNNAILNTLINGY 364
Query: 140 NLSGE--AMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
+SG+ F N + + D+ +YN+++ L + F +++++M++ G P+
Sbjct: 365 VMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPN 424
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ T +I+++ +AG + +A +L + GL ++ N ++ LC++ V A +L +
Sbjct: 425 VITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLS 484
Query: 258 SMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
M K ++ TYN +I G K+ ++ E R+ ++ +G +++T++ LI L R G
Sbjct: 485 EMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRG 544
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
A+ + + M +GC D YN +I + VG+ ++ ++ Y+ M + +
Sbjct: 545 AFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCN 604
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+I+GL K KV +A E + ++RG VP T S L LC G A
Sbjct: 605 IMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEA---------- 654
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
L+L+ +Q G D Y I+ C G + +A
Sbjct: 655 -------------------------LNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDA 689
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
L + GF PS L ++ L LL + E+ +
Sbjct: 690 CLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNF 725
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 171/373 (45%), Gaps = 6/373 (1%)
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
KSY+++++ L NV DM +GV+P + T IVM + +V A +L
Sbjct: 184 KSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRD 243
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQ 282
+ G ++ ++ L Q+ V A L M + +V T+N VI G K+ +
Sbjct: 244 MTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNK 303
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ + +++ ++ GF PD++T+ FL+ GL R G++++A ++ + P+ N
Sbjct: 304 IHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAILNT 359
Query: 343 VISNYISVGDFDECMKYY-KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I+ Y+ G E + + M ++ +P++ TY L+ GL K ++ A ++ EM R
Sbjct: 360 LINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRR 419
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G P+ T + LC G A ++ + G ++ Y L+ L K +
Sbjct: 420 GCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVA 479
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+L EM G D Y +I GLC + +++ A + L G + + Y+ L +
Sbjct: 480 LNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHA 539
Query: 522 LLASNKLESAYNL 534
LL + A L
Sbjct: 540 LLRRGAFQKALTL 552
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 171/410 (41%), Gaps = 40/410 (9%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y V + LG F + +L M +EG+ I+M + +AGQ +AI++L +
Sbjct: 115 YYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMR 174
Query: 226 DFGL-KFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
L + +S ++VL L A+++F M K V V T+ IV+ +V
Sbjct: 175 AVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEV 234
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+L+++ G P+S+ + LI L + ++ +A+++ + M GC PD +N V
Sbjct: 235 DSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDV 294
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF-------- 395
I V + K M P+ TY L+ GL + K+ +A ++
Sbjct: 295 IHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNN 354
Query: 396 ------------------------EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
E M++ G P T + LC G A +
Sbjct: 355 AILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVN 414
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLC 488
+ + GC+ ++ Y +L ++G K G+L + + HEM G + IY +I LC
Sbjct: 415 EMSRRGCEPNVITYAIL---VNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALC 471
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++ A+ ++ E KG P Y+ L L ++++ A+ LF +
Sbjct: 472 RKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNM 521
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 38/270 (14%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL--------------------------- 198
YN ++ AL R++ N+LS+M +G PDL
Sbjct: 463 YNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNML 522
Query: 199 --------ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
T + ++ + +R G KA+ ++ + G D + N ++ C+ ++
Sbjct: 523 LDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIE 582
Query: 251 AASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
L+ M L + ++ NI+I+G K+G+V L++ + GF PD +T++ ++
Sbjct: 583 KGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVL 642
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF-DECMKYYKGMSSYNC 368
GL + GRI +A+ +FD ++ +G PD YN IS G D C+ +Y+G+ +
Sbjct: 643 NGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFV 702
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEM 398
N+ T+ L+ LLK + V +E+
Sbjct: 703 PSNL-TWNVLVYTLLKQSNQENNFFVLDEL 731
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 177/410 (43%), Gaps = 36/410 (8%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YNV++ L + + +L M G P+ T ++++ + R + +A+++L +
Sbjct: 370 TYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 429
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSL-----FNSMKGKVLF-------------- 265
E L A S ++ LC + A+ L F+ +K V+
Sbjct: 430 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRI 489
Query: 266 -----------------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
++ YN +IS SK G++ E L EI G PD++TF
Sbjct: 490 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 549
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I G + G++ +A + FD M + G P+ Y +I+ + G+ E + ++ + +
Sbjct: 550 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGV 609
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P++ T + I GLLK+ +V +AL+VF E+ ++G+VP T +S + C G A
Sbjct: 610 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 669
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++ + G ++ Y L+ L G L+ M E G D Y +I G C
Sbjct: 670 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 729
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ A + E KG P VY+ L + +E A NLFR++
Sbjct: 730 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM 779
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 176/387 (45%), Gaps = 14/387 (3%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
VA D+ YN I+ L + + L ++ G+ PD T + + + G++ +A
Sbjct: 504 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAA 563
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGW 277
+ + D GL + V++ + ++ A S+F + VL +V T + I G
Sbjct: 564 KYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGL 623
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G+V E +V E+ +G PD T+S LI G + G ++ A E+ D M KG P+
Sbjct: 624 LKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 683
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YNA++ GD K + GM EP+ TY+ +I G KS VA+A +F E
Sbjct: 684 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 743
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M +G+ P + + + C G AM ++++ + G +L+ L + G+ K
Sbjct: 744 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTL----IDGYCK 799
Query: 458 CGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+ + L+ EM D Y VI C G++E A L+ +E + +
Sbjct: 800 SCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVT 859
Query: 515 YSKLS---NKLLASNKLESAYNLFRKI 538
Y+ L NKL S+++ + LF K+
Sbjct: 860 YTSLMYGYNKLGQSSEV---FALFEKM 883
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 182/384 (47%), Gaps = 6/384 (1%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV Y++++ A + +L M+ GV PD+ + ++ +AG++ +
Sbjct: 471 PNVV----VYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEE 526
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVIS 275
A L ++ GLK DA + + + + A+ F+ M L N Y ++I+
Sbjct: 527 ASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN 586
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G K G ++E + + + A G PD T S I GL + GR+ +A++VF +KEKG P
Sbjct: 587 GHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP 646
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D Y+++IS + G+ ++ + + M PN+ Y L+ GL KS + A ++F
Sbjct: 647 DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF 706
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
+ M ++G+ P + T ++ ++ C A ++ + G + Y L+
Sbjct: 707 DGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE 766
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
G ++L+ EM + G+ + + +I G C +++ A + +E + K P + Y
Sbjct: 767 GDMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTY 825
Query: 516 SKLSNKLLASNKLESAYNLFRKIK 539
+ + + + K+E A LF++++
Sbjct: 826 TTVIDWHCKAGKMEEANLLFKEMQ 849
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 197/437 (45%), Gaps = 15/437 (3%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
+L +++G+G+ DA+ L GK+ +F+ + H + +
Sbjct: 529 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK--------YFDEMLDH-GLMPNNP 579
Query: 165 SYNVIVKALGRRKFFDFM--CNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
Y V++ G K + M ++ + GV PD++T S + ++ G+V +A+++
Sbjct: 580 LYTVLIN--GHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFS 637
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
L++ GL D + + ++ C++ V A L + M K + N+ YN ++ G K G
Sbjct: 638 ELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSG 697
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ ++ + +G PDS+T+S +I+G ++ + +A +F M KG P + YN
Sbjct: 698 DIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYN 757
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A++ GD ++ M ++ M + ++ LI G KS K+ +A ++F+EM+ +
Sbjct: 758 ALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAK 816
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
I+P T T+ ++ C G A +++K+ ++ + Y L+ + G+ +
Sbjct: 817 QIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEV 876
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+ +M G D Y VI C L A + +E + KG ++ L
Sbjct: 877 FALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITA 936
Query: 522 LLASNKLESAYNLFRKI 538
L L A L ++
Sbjct: 937 LCKREDLTEASKLLDEM 953
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 186/446 (41%), Gaps = 38/446 (8%)
Query: 129 LDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSD 188
D++ R + EA +FF K+ ++ + N ++K L + + V +
Sbjct: 161 FDILIDSYKRMGMLDEAANVFF--VAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNG 218
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + D+ T + ++ + + G + A ++L +++ GL + ++V+ +CQ
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278
Query: 249 VGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ A L SM K L N TY I+ +G + ++ E + +E+ G PD S
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSA 338
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI+G R G ID+ + + D M G + YN +I G ++ + KGM +
Sbjct: 339 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLG 398
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
C+PN T+ LI G + + ALE+ +EM R +VPS + + + LC A
Sbjct: 399 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLAN 458
Query: 428 MMYKKARKVGCKLSLTAYKLLL-------------RRLSGFGKCGMLLDLWH-------- 466
+ +K G K ++ Y +L+ R L G G+ D++
Sbjct: 459 KLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCL 518
Query: 467 --------------EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
E+Q G D + I G G++ A +E L G P+
Sbjct: 519 SKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNN 578
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKI 538
+Y+ L N + L A ++FR++
Sbjct: 579 PLYTVLINGHFKAGNLMEALSIFRRL 604
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/480 (22%), Positives = 190/480 (39%), Gaps = 106/480 (22%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y +V AL + VL +M ++G+NP+ S+V++ + G + +A+++
Sbjct: 227 DVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELK 286
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL----------------- 264
+ + GL + + ++ LC+ + A F M+ L
Sbjct: 287 RSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMRE 346
Query: 265 -------------------FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
N++TYN++I G K G++ + +LK +V G P+S TF
Sbjct: 347 GDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTF 406
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEK---------------------------------- 331
LIEG R + A+E+ D M+++
Sbjct: 407 CLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTF 466
Query: 332 -GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
G P+ Y+ +I Y S G +E + GMS P++ Y +IS L K+ K+ +
Sbjct: 467 SGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEE 526
Query: 391 A----LEV-------------------------------FEEMLDRGIVPSTGTITSFLE 415
A LE+ F+EMLD G++P+ T +
Sbjct: 527 ASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN 586
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
G A+ ++++ +G + + L G+ L ++ E++E G
Sbjct: 587 GHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP 646
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
D Y +I+G C G++E A + +E KG P+ +Y+ L + L S ++ A LF
Sbjct: 647 DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF 706
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 189/430 (43%), Gaps = 23/430 (5%)
Query: 127 LSLDVVGKVVNRGNLSGEAMVL-FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNV 185
L+ DV+ V+++ + +L FF W+ V + + S++++ L + F V
Sbjct: 69 LNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGV 128
Query: 186 LSDMAKE-------------------GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
L+ M + G +P + I++DS+ R G + +A + ++
Sbjct: 129 LTQMIRTPYSSSSILDSVLFWFRNYGGSSPVV--FDILIDSYKRMGMLDEAANVFFVAKN 186
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVE 285
+ N +L L + + ++N M K+ F+V TY ++ K G +
Sbjct: 187 DSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRG 246
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+RVL E+ +G +P+ +S +IEG+ + G ID+A+E+ +M EKG P+T Y + +
Sbjct: 247 AKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITA 306
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+E ++ M +P+ + + LI G ++ + + L + + M+ GI
Sbjct: 307 GLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPI 366
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
+ T + LC +G A + K +GCK + + LL+ G L+L
Sbjct: 367 NLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELL 426
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
EM++ Y +I GLC+ L A ++E+ G P+ +VYS L +
Sbjct: 427 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASE 486
Query: 526 NKLESAYNLF 535
++E A L
Sbjct: 487 GRIEEARRLL 496
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 172/392 (43%), Gaps = 7/392 (1%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F N+ P V +++++ + R D NV + + L + ++
Sbjct: 150 FRNYGGSSPVV------FDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDL 203
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNV 267
++ G + ++ + D + FD + ++ LC+ + A + M K L N
Sbjct: 204 LKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNE 263
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
Y++VI G ++G + E + + + +G P++ T++ + GL RA R+++A F+
Sbjct: 264 FIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEE 323
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M++ G PD NA +A+I ++ GD DE ++ M S N+ TY LI GL K K
Sbjct: 324 MQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGK 383
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ A E+ + M+ G P++ T +E C A+ + + K S +Y
Sbjct: 384 MEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGA 443
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
++ L + L +M SG + +Y +I + G++E A +++ G
Sbjct: 444 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSG 503
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P Y+ + + L + K+E A +I+
Sbjct: 504 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 535
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 150/307 (48%), Gaps = 16/307 (5%)
Query: 159 VAKDVKSYNVIVKALGR-------RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
+A ++ YN +V L + RK FD M ++G+ PD T S ++D + ++
Sbjct: 679 IAPNIFIYNALVDGLCKSGDIQRARKLFD-------GMPEKGLEPDSVTYSTMIDGYCKS 731
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYN 271
V +A + + G++ + N ++ C+ + A +LF M K +++N
Sbjct: 732 ENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFN 791
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I G+ K ++ E ++ +E++A+ PD +T++ +I+ +AG++++A +F M+E+
Sbjct: 792 TLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQER 851
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
DT Y +++ Y +G E ++ M + +P+ TY +I K + +A
Sbjct: 852 NLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEA 911
Query: 392 LEVFEEMLDRGIVPSTGTITSFL-EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
++ +E++ +G++ + GTI L LC A + + ++G K SL A L+R
Sbjct: 912 FKLRDEVVGKGML-TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVR 970
Query: 451 RLSGFGK 457
GK
Sbjct: 971 SFHEAGK 977
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 104/236 (44%), Gaps = 1/236 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S+N ++ + + +M + + PD T + V+D +AG++ +A + +
Sbjct: 789 SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEM 848
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
++ L D + +++ + +LF M K V + +TY +VI K +
Sbjct: 849 QERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNL 908
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
VE ++ E+V +G LI L + + +A ++ D M E G P A N +
Sbjct: 909 VEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTL 968
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
+ ++ G DE + ++G+ S P+ T L++G L DA + ++++
Sbjct: 969 VRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 173/358 (48%), Gaps = 1/358 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V +Y V+V A+ + + D +L++M ++G+ P + T + ++ + G++ A+++L
Sbjct: 353 NVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEIL 412
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
G +E + + + N ++ +R HV A +L + M + K+ +++TYN +I K
Sbjct: 413 GLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKA 472
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G ++L + G PD T+S I+ L ++ R+++A ++F+++KEKG + Y
Sbjct: 473 GHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMY 532
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
A+I + G DE + + M S +C PN TY LI G+ K KV + L + E M
Sbjct: 533 TALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSK 592
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ P+ T T +E + G A ++ + G K + Y + G
Sbjct: 593 MGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKE 652
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+ M E+G D Y +I+ +G +A V++ L G PS +++ L
Sbjct: 653 AEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNL 710
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 180/440 (40%), Gaps = 48/440 (10%)
Query: 137 NRGNLSGEAMVLFFN-WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
N +L+ + FFN + P VKS++ ++K L F + M K V+
Sbjct: 93 NHPDLNPNIALQFFNSLPLIKPGFKHTVKSHSFLLKILIPNNLFGVGEKIRISMIKACVS 152
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
D + ++D F+R QM D K S N +L L + L + +
Sbjct: 153 VD--DIRFLLD-FLR--------QMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRV 201
Query: 256 FNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL------ 308
+ M ++ N+ T N +++ +SK+G +VE + +I G SPDS T++ L
Sbjct: 202 YTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCR 261
Query: 309 -----------------------------IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
I GL AGRID+ I +F M+E C P
Sbjct: 262 NNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRT 321
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y +I E M + M +CEPN+ TYT ++ + K RK+ ++ + EM+
Sbjct: 322 YTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMM 381
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
++G+VPS T + + C G AA+ + C+ + Y L+ S
Sbjct: 382 EKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVH 441
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ L +M ES Y +I C G ++A +++ G P + YS
Sbjct: 442 KAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFI 501
Query: 520 NKLLASNKLESAYNLFRKIK 539
+ L S ++E A +LF +K
Sbjct: 502 DTLCKSKRMEEACDLFNSLK 521
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 183/399 (45%), Gaps = 8/399 (2%)
Query: 163 VKSYNVIVKAL-GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
V++Y VI+ AL G + + M ++ ++M + P++ T ++++D+ + ++ ++ ++L
Sbjct: 319 VRTYTVIIHALFGNDRNLEGM-DLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRIL 377
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
+ + GL + N ++ C+ + AA + M+ N TYN +I G+SK
Sbjct: 378 NEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKR 437
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
V + +L +++ +P +T++ LI +AG D A ++ D +KE G PD Y
Sbjct: 438 KHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTY 497
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ I +E + + + N YT LI G K+ K+ +A+ + E M
Sbjct: 498 SVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHS 557
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+P++ T S + +C G + M + K+G K ++ Y +L+ + G
Sbjct: 558 EDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDH 617
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
++++M G+ D Y I C G ++ A +M + G P L Y+ L
Sbjct: 618 ANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLL-- 675
Query: 521 KLLASNKLESAYNLFRKIK--IARQNDYARRLWRSKGWH 557
+ A +L AY+ F +K + D + +W + W+
Sbjct: 676 -ISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLIWY 713
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 138/285 (48%), Gaps = 1/285 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N + ++YN ++ +RK +LS M + + P L T + ++ +AG A
Sbjct: 419 NCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSA 478
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
++L L++ GL D + +V + LC+ + A LFNS+K K + N + Y +I G
Sbjct: 479 YKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDG 538
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K G++ E +L+ + +E P+S T++ LI G+ + G++ + + + + M + G P
Sbjct: 539 HCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPT 598
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y +I + GDFD + + M S+ +P++ TYT I S V +A +
Sbjct: 599 VATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMA 658
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
M++ G++P + T T + G + A + K+ GC S
Sbjct: 659 RMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPS 703
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 161/381 (42%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D +Y ++ R + V + M +G + + + ++ AG++ + I
Sbjct: 245 LSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGI 304
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
+ ++ + + V++ L LFN M+ + NV TY +++
Sbjct: 305 SLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAM 364
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K ++ E R+L E++ +G P +T++ LI G GRI+ A+E+ M+ C P+
Sbjct: 365 CKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNE 424
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I + + M M P++ TY LI K+ A ++ +
Sbjct: 425 RTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDL 484
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ + G+VP T + F++ LC A ++ ++ G K + Y L+ GK
Sbjct: 485 LKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGK 544
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+ L M + Y +I G+C G+++ + ++E + G P+ Y+
Sbjct: 545 IDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTI 604
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L ++L + A +F ++
Sbjct: 605 LIEEMLREGDFDHANRVFNQM 625
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 106/253 (41%), Gaps = 34/253 (13%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K + D +Y+V + L + K + C++ + + ++G+ + + ++D +AG+
Sbjct: 485 LKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGK 544
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
+ +AI +L +R+H L N TYN +
Sbjct: 545 IDEAISLL-----------------------ERMH-----------SEDCLPNSSTYNSL 570
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
I G K G+V E +++ + G P T++ LIE + R G D A VF+ M G
Sbjct: 571 IYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGH 630
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
PD Y A I Y + G+ E M P+ TYT LIS + DA
Sbjct: 631 KPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFN 690
Query: 394 VFEEMLDRGIVPS 406
V + MLD G PS
Sbjct: 691 VLKRMLDAGCDPS 703
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 8/200 (4%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FN ++K + + Y ++ + D ++L M E P+ T + ++
Sbjct: 516 LFN-SLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGV 574
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--- 265
+ G+V + + M+ + G+K + +++ + + A+ +FN M V F
Sbjct: 575 CKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQM---VSFGHK 631
Query: 266 -NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+V TY I + G V E E ++ ++ G PDSLT++ LI R G DA V
Sbjct: 632 PDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNV 691
Query: 325 FDTMKEKGCGPDTNAYNAVI 344
M + GC P +N +I
Sbjct: 692 LKRMLDAGCDPSHPIWNNLI 711
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 168/344 (48%), Gaps = 24/344 (6%)
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
E+ +I + +R G++ +A +L + D G++ + S N+V+ LC+ + A L
Sbjct: 236 ESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRL 295
Query: 259 MKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
M VL + +TY ++ G+ G+V E VL+E++ +G SP++ T + L+ L + GR
Sbjct: 296 MTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGR 355
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM-------------- 363
I +A E+ M EKG DT N VI + G D+ ++ GM
Sbjct: 356 ISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNS 415
Query: 364 ---------SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
S C P++ +Y+ +ISGL K+ +V +A + F EM+ + + P + F+
Sbjct: 416 YIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFI 475
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
C G +A + K K GC +L Y L+ L + + L EM+E G
Sbjct: 476 HSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVS 535
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
D IY V++ LC G++++A V++E L+KG P+ +S L
Sbjct: 536 PDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSIL 579
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 165/365 (45%), Gaps = 8/365 (2%)
Query: 144 EAMVLFFNWAIKH---PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
E V +W K V+ + ++NV++ L D + M ++G P+ +
Sbjct: 34 EGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYS 93
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
I++ + RAG K +++LG + G + N ++ C+ A L + M+
Sbjct: 94 FGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMR 153
Query: 261 GKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF----SPDSLTFSFLIEGLGRA 315
L +V+T+N IS G+V+E R+ +++ + P+ +T++ ++ G +
Sbjct: 154 KDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKE 213
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
G +++A +F+ MK + +YN + + +G E K M EPN+ +Y
Sbjct: 214 GMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSY 273
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
++ GL K+ + DA + M G++P T T T+ L C G A + ++ +
Sbjct: 274 NIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMR 333
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
GC + +LL L G+ +L +M E GY D VI GLCN G+L+
Sbjct: 334 DGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDK 393
Query: 496 AVLVM 500
A+ ++
Sbjct: 394 AIEIV 398
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 185/402 (46%), Gaps = 28/402 (6%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL- 224
YN ++ + + D ++ +M K+G++PD+ T + + + +G+V +A ++ +
Sbjct: 129 YNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQ 188
Query: 225 --EDFGL-KFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
E GL + + + N++L C+ + A +LF MK + L N +YNI + G ++
Sbjct: 189 IDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRI 248
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+++E + VLKE+V G P+ +++ +++GL + G + DA + M G PDT Y
Sbjct: 249 GKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTY 308
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++ Y G E + M C PN T L+ L K ++++A E+ ++M +
Sbjct: 309 TTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNE 368
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAM-----MMYKKARKVG------------------ 437
+G V T T ++ LC+ G A+ M + +G
Sbjct: 369 KGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKK 428
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
C L +Y ++ L G+ G + EM D IY+ I C G++ +A
Sbjct: 429 CMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAF 488
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
V+++ +KG + Y+ L L + N++ Y L +++
Sbjct: 489 RVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMR 530
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 156/349 (44%), Gaps = 25/349 (7%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
NVL +M ++G +P+ T +I++ S + G++ +A ++L ++ + G D + N+V+ L
Sbjct: 326 NVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGL 385
Query: 244 CQRLHVGAASSLFNSM------------------------KGKVLFNVMTYNIVISGWSK 279
C + A + N M + K + ++++Y+ +ISG K
Sbjct: 386 CNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCK 445
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G+V E ++ E++ + PDS + I + G+I A V M++KGC
Sbjct: 446 AGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQT 505
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YN++I S E M P++ Y ++S L + +V DA V +EML
Sbjct: 506 YNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEML 565
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
+GI P+ + + ++ C A +++ A V C Y L L G+
Sbjct: 566 QKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNV-CGHKEALYSLTFNELLVGGEVV 624
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+L+ + + +Y+ +I LC +L++A ++ + + KG+
Sbjct: 625 KAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGY 673
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 147/297 (49%), Gaps = 13/297 (4%)
Query: 250 GAASSLFNSMKGKVLFN---VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
G A S F S++ + N + YN+++ +K G+V + + K++VA G SP++ TF+
Sbjct: 1 GKAISQFKSLRFRFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFN 60
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
LI L +G +DDA E+FD M EKGC P+ ++ ++ Y G + ++ M
Sbjct: 61 VLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRL 120
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
PN Y LIS K K DA ++ +EM G+ P T + + LCS G A
Sbjct: 121 GFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEA 180
Query: 427 MMMYKKAR---KVGC-KLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEI 479
+++ + +G + ++ Y L+ L GF K GML + L+ +M+ S + E
Sbjct: 181 SRIFRDMQIDEVLGLPQPNIITYNLM---LGGFCKEGMLEEARALFEKMKVSENLMNRES 237
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
Y + GL IG+L A LV++E + G P+ Y+ + + L + L A L R
Sbjct: 238 YNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMR 294
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 146/343 (42%), Gaps = 18/343 (5%)
Query: 106 FLQKLKGKG-VIEDALWNVNVDL-----SLDVVGKVVNR---------GNLSGEAMVLFF 150
LQK+ KG VI+ N+ +D LD ++VN GNL G + +
Sbjct: 362 LLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNL-GNSYIGLV 420
Query: 151 NWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR 210
+ + D+ SY+ I+ L + +M + + PD + + SF +
Sbjct: 421 DDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCK 480
Query: 211 AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMT 269
G++ A ++L +E G ++ N ++ L + + L + M+ + V +V
Sbjct: 481 EGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSI 540
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
YN V+S + G+V + VL E++ +G SP+ +FS LI+ +A E+F+ +
Sbjct: 541 YNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFE-IA 599
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
CG Y+ + + G+ + + ++ + + Y LI L K K+
Sbjct: 600 LNVCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLD 659
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
DA + +++D+G + ++ L G H A + +K
Sbjct: 660 DASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEK 702
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 82/171 (47%)
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P++ Y L+ K +V + ++M+ G+ P T T + LC G A +
Sbjct: 19 PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ K + GC+ + ++ +L+R G L+L EM+ G+ + +Y +I+ C
Sbjct: 79 FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
G+ ++A +++E + G P + ++ + L +S K+ A +FR ++I
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQI 189
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 201/441 (45%), Gaps = 26/441 (5%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
L+ + G + DA+ V +L G V L E +++ A DV
Sbjct: 196 ALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLM---------GCAADVN 246
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+++ +V+ + ++ M +G P + T ++ R Q +A MLGR+
Sbjct: 247 TFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRV 306
Query: 225 EDFGLKFDAESLNVVLW------CLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+ LNVVL+ CL + + A+ L+ +M K + TY+I++ G
Sbjct: 307 PE---------LNVVLFNTVIGGCLAEG-KLAEATELYETMGLKGCQPDAHTYSILMHGL 356
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
KLG++ R+L+E+ +GF+P+ +T++ ++ + G DD + + M KG ++
Sbjct: 357 CKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I G DE M + M S C P++ +Y +I L + ++ +A +FE
Sbjct: 417 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN 476
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+L+ G+V + T + + L G A+ + K+ GC L + +Y L++ + G
Sbjct: 477 LLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGN 536
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L L EM E G + Y +I+ LC ++ +A+ + ++ L +G P + Y+
Sbjct: 537 VDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNT 596
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L N L + +A NL K+
Sbjct: 597 LINGLCKMGWMHAALNLLEKL 617
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 159/328 (48%), Gaps = 4/328 (1%)
Query: 123 VNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFM 182
+NV L V+G + G L+ EA L+ +K D +Y++++ L +
Sbjct: 309 LNVVLFNTVIGGCLAEGKLA-EATELYETMGLK--GCQPDAHTYSILMHGLCKLGRISSA 365
Query: 183 CNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWC 242
+L +M K+G P++ T +IV+ SF + G +L + GL +++ N +++
Sbjct: 366 VRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYA 425
Query: 243 LCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
LC+ + A L M+ + ++ +YN +I Q+ E E + + ++ EG +
Sbjct: 426 LCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVAN 485
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+T++ +I L R GR DA+ + M GC D +YN +I G+ D + +
Sbjct: 486 GITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLE 545
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M+ +PN +Y LIS L K R+V DALE+ ++ML++G+ P T + + LC G
Sbjct: 546 EMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMG 605
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLL 449
HAA+ + +K + Y +L+
Sbjct: 606 WMHAALNLLEKLHNENVHPDIITYNILI 633
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 148/323 (45%), Gaps = 2/323 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M +G PD T SI+M + G++ A+++L +E G + + +VL C+
Sbjct: 337 MGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGM 396
Query: 249 VGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+L M K L N YN +I K G++ E +++E+ ++G +PD +++
Sbjct: 397 WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNT 456
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
+I L ++++A +F+ + E+G + YN +I + G + + ++ K M +
Sbjct: 457 IIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHG 516
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
C ++ +Y LI + K V +L + EEM ++GI P+ + + LC A+
Sbjct: 517 CSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDAL 576
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+ K+ G + Y L+ L G L+L ++ D Y +I+
Sbjct: 577 ELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWH 636
Query: 488 CNIGQLENAVLVMEESLRKGFCP 510
C + L++A +++ ++ CP
Sbjct: 637 CKVRLLDDAAMLLNRAM-AAVCP 658
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 141/327 (43%), Gaps = 7/327 (2%)
Query: 216 KAIQMLGRL-EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNI 272
+A+ +L +L FG++ S NVVL L + A +L+ M + +V T+ +
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+LG+ E +L+ + G PD++ + +I L G + +A + + M G
Sbjct: 181 AARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
C D N ++ V+ +G E + M + C P + TY L+ GL + R+ +A
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+ + + +V I L + G A +Y+ GC+ Y +L+ L
Sbjct: 301 AMLGRVPELNVVLFNTVIGGCL----AEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G+ + L EM++ G+ + Y V+ C G ++ ++EE KG +
Sbjct: 357 CKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKIK 539
Y+ + L +++ A L ++++
Sbjct: 417 QGYNGMIYALCKDGRMDEAMGLIQEMR 443
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 98/229 (42%), Gaps = 25/229 (10%)
Query: 35 SYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVDE 94
SYN ++ + N + H+ + L + +++ ++ N + + D+ R E
Sbjct: 453 SYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITY-NTIIHALLRDGRWQDAVRLAKE 511
Query: 95 FLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAI 154
+L G L + G+I+ + NVD SL ++ ++ +G I
Sbjct: 512 MIL-----HGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG--------------I 552
Query: 155 KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV 214
K NV SYN+++ L + + + M +G+ PD+ T + +++ + G +
Sbjct: 553 KPNNV-----SYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWM 607
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
+ A+ +L +L + + D + N+++ C+ + A+ L N V
Sbjct: 608 HAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAV 656
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 197/433 (45%), Gaps = 13/433 (3%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L+++K G +A+ + + L G+VV EA+ F A + A DV +
Sbjct: 79 LLEEMKSSGFEGNAVVHTTLMKGLCDAGRVV-------EALEHFRAMA---KDCAPDVMT 128
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y +V AL + FD +L +M +G PD T S ++D + G +A ++L +
Sbjct: 129 YTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVI 188
Query: 226 DFGLKFDAESLNVVLWCLCQRLH-VGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
G+ + ++ LC + + V AS + + K V+ +N+VI+G+ K +
Sbjct: 189 QRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDL 248
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
++L+ ++ +G P+ TF+ LI GL +A R+ +A ++ + M GC P+ Y+ V
Sbjct: 249 DSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTV 308
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I+ G D+ + ++ M NC PN+ T+ LI GL K++++ +A +++ M + G
Sbjct: 309 INGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGC 368
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS-LTAYKLLLRRLSGFGKCGMLL 462
P T S ++ LC A +++ + G + Y L + G+
Sbjct: 369 APDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADAC 428
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
++ + + G+ D Y +I C + V ++EE KGF P S + L
Sbjct: 429 RIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGL 488
Query: 523 LASNKLESAYNLF 535
N E A LF
Sbjct: 489 FEGNHTERAIQLF 501
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 188/429 (43%), Gaps = 39/429 (9%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
E ++LFF+WA V +V S N + L R + + P+ T I
Sbjct: 5 ELVLLFFDWA--RSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGI 62
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++ F AG + AIQ+L ++ G + +A ++ LC V A F +M
Sbjct: 63 LIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDC 122
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+VMTY ++ K G+ E + +L+E+VA+G +PD++TFS LI+GL + G + A
Sbjct: 123 APDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFR 182
Query: 324 VFDTMKEKGCG------------------------------------PDTNAYNAVISNY 347
V + + ++G G P +N VI+ +
Sbjct: 183 VLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGF 242
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
D D K + M C PN+ T+T LI+GL K+ +V +A ++ E+M+ G P+
Sbjct: 243 CKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNV 302
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T ++ + LC G A +++ + C ++ + +L+ L + L+H
Sbjct: 303 VTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHR 362
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV-YSKLSNKLLASN 526
M+E+G D Y +I GLC Q++ A + + G + V YS L + A
Sbjct: 363 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALG 422
Query: 527 KLESAYNLF 535
++ A +F
Sbjct: 423 RMADACRIF 431
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 188/409 (45%), Gaps = 7/409 (1%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
+ N GEA L + + +V +Y+ ++ L ++ D + M + P+
Sbjct: 279 KANRVGEAQQLLEKMVMG--GCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPN 336
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ T +I++D +A ++ +A Q+ R+ + G D + N ++ LC+ V A LF
Sbjct: 337 VVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQ 396
Query: 258 SM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
++ G N +TY+ + G++ LG++ + R+ +V +GFSPD T++ LI +
Sbjct: 397 TIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKT 456
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
R + +E+ + M KG P N +AV+ + ++ + M++ C + Y
Sbjct: 457 SRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIY 516
Query: 376 TRLISGLLKSRKVADALEVFEEML---DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
++ G+ ++ K AL V E+++ DR PS+ + + +E LC G A + K
Sbjct: 517 NLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHK 576
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+ G ++++Y LL LS + ++ M +G + VI+ LC+ +
Sbjct: 577 MSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAK 636
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
+++A +++ + G CP + L S + + A L ++ A
Sbjct: 637 VDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEA 685
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 153/342 (44%), Gaps = 38/342 (11%)
Query: 235 SLNVVLWCLCQRLHVGAASSLF-NSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
S N L LC+ A +LF N+M + N TY I+I G+S G + ++L+E+
Sbjct: 24 SCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEM 83
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+ GF +++ + L++GL AGR+ +A+E F M K C PD Y A++ G F
Sbjct: 84 KSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTALVHALCKAGKF 142
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
DE + M + C P+ T++ LI GL K A V E+++ RG+ S +
Sbjct: 143 DEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETI 202
Query: 414 LEPLC-----------------SYGPPHAAMMM------YKKARKV-------------G 437
++ LC + G +M + KA+ + G
Sbjct: 203 IQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKG 262
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
C ++ + +L+ L + G L +M G + Y VI GLC GQ+++A
Sbjct: 263 CVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAY 322
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + R+ P+ + ++ L + L + ++E A L+ +++
Sbjct: 323 ELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMR 364
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 7/281 (2%)
Query: 172 ALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF 231
ALGR C + S + +G +PDL T + ++ + + + + ++++ + G
Sbjct: 420 ALGR---MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPP 476
Query: 232 DAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVL 290
+L+ VL L + H A LF+SM + + + YN+V+ G ++ + + VL
Sbjct: 477 RVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVL 536
Query: 291 KEIVAE---GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
++++ + F+P S L+E L + G+ DDA ++ M E+G ++YN ++S
Sbjct: 537 EQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGL 596
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
+ +DE + ++ M S P + T +IS L + KV DA E+ + M G P
Sbjct: 597 SRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDI 656
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
T + + C G A + ++ + G + + T + LL
Sbjct: 657 ETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 144/329 (43%), Gaps = 6/329 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNP-DLETLSIVMDSFIRAG 212
++ A D+ +YN ++ L + D + + + GV+ + T S + + G
Sbjct: 363 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALG 422
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYN 271
++ A ++ L D G D + ++ C+ L M K V T +
Sbjct: 423 RMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLS 482
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM--- 328
V+ G + ++ + A G + D+L ++ ++EG+ RA + D A+ V + +
Sbjct: 483 AVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDK 542
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+++ P ++A +A++ + VG D+ + MS + +Y RL+SGL + ++
Sbjct: 543 RDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRW 602
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A +VFE M+ G P T+ + LCS A + ++ K+GC + L
Sbjct: 603 DEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTL 662
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGY-PSD 476
+ G+ + L EM E+G P+D
Sbjct: 663 IGGYCKSGRADLARKLLEEMTEAGLEPND 691
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 193/438 (44%), Gaps = 18/438 (4%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L KL G++ V VD + ++ N A+ +F + I + + S
Sbjct: 212 LLDKLLSYGLV------VTVDSCNAFLSRIANNSEGIEMAIKVFCEYGI-----SWNTTS 260
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN+I+ +L R +L M PD+ + S V+D + G++ KA++++ ++
Sbjct: 261 YNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQ 320
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVG----AASSLFNSMKGKVLFNVMTYNIVISGWSKLG 281
GLK + + N ++ LC+ +G A L M K++ + + Y +I G+ KLG
Sbjct: 321 IKGLKPNRYTYNSIILLLCK---IGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLG 377
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
V + E++++ SPD +T++ LI+G G+ G++ + +F M +G PD Y
Sbjct: 378 HVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYT 437
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I Y G+ + M PN+ TY LI GL K ++ A E+ +EM +
Sbjct: 438 TLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK 497
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G+ + S + +C G A+ + K+ G Y ++ G
Sbjct: 498 GLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKA 557
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L EM + G + ++ G C +G LE+ ++ L KG P + Y+ L +
Sbjct: 558 HKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQ 617
Query: 522 LLASNKLESAYNLFRKIK 539
N + + ++++++
Sbjct: 618 HCIRNSMNTTTKIYKRMR 635
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 168/355 (47%), Gaps = 1/355 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D +Y +++ G+ N+ +M G+ PD T + ++D + +AG++ A
Sbjct: 394 ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAF 453
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
+ + G+ + + ++ LC+ + A+ L + M+ K L NV YN +++G
Sbjct: 454 SLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGI 513
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G + + +++KE+ G PD++T++ +I+ R G ID A ++ M ++G P
Sbjct: 514 CKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTV 573
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+N +++ + +G ++ + M P+ TY L+ + ++++
Sbjct: 574 VTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKR 633
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M ++G+ P + T ++ C A +YK+ + G ++T+Y L++R K
Sbjct: 634 MRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRK 693
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
+L+ EM+ G +DGEIY + + G +E + + +E++ K R
Sbjct: 694 FXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKCLLNER 748
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 159/346 (45%), Gaps = 1/346 (0%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P+ I + G + +A ++L +L +GL +S N L + G ++
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSE-GIEMAI 246
Query: 256 FNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
+ + +N +YNI+I +LG+V E R+L ++ +PD +++S +I+G
Sbjct: 247 KVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHL 306
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
G + A+++ D M+ KG P+ YN++I +G E K + M S P+ Y
Sbjct: 307 GELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVY 366
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
T LI G K V A + F+EML + I P T T+ ++ G ++ +
Sbjct: 367 TTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMIS 426
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
G K Y L+ G+ L +EM + G + Y +I GLC G+L+
Sbjct: 427 RGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDT 486
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
A +++E +KG + +Y+ + N + + +E A L +++++A
Sbjct: 487 ANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVA 532
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 4/203 (1%)
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL-KSRKVADAL 392
GP+ A++ + +G E K + SY +D+ +S + S + A+
Sbjct: 187 GPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAI 246
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+VF E GI +T + + LC G A + + + +Y ++
Sbjct: 247 KVFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGY 303
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G+ L L +MQ G + Y +I LC IG+ A V+ E + + P
Sbjct: 304 CHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDN 363
Query: 513 LVYSKLSNKLLASNKLESAYNLF 535
+VY+ L + + +A F
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWF 386
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/485 (23%), Positives = 210/485 (43%), Gaps = 78/485 (16%)
Query: 128 SLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLS 187
S D+V +++ GN A +F++ K V+ V ++ +++KAL D C++L
Sbjct: 185 SYDLVLEILVTGNCPQVATNVFYDMLSK--GVSPTVFTFGIVMKALCMFNEVDSACSLLR 242
Query: 188 DMAKEGVNPDLETLSIVMDSFIRA----GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
DM K G P+ SIV + I A QV +A+++L + G D ++ N V+ L
Sbjct: 243 DMTKHGCVPN----SIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGL 298
Query: 244 CQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEI--------- 293
C+ + A+ L + M + + + MTY ++ G ++G++ E ++L +I
Sbjct: 299 CKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILN 358
Query: 294 -----------------------VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
+ GF PD T++ L+ GL + G + A ++ + M
Sbjct: 359 TLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSR 418
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS---------YN-------------- 367
+GC P+ Y +++ G +E MS+ YN
Sbjct: 419 RGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHV 478
Query: 368 ------------CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
C+P++ TY LI GL K ++ +A +F ML G V + T + +
Sbjct: 479 ALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIH 538
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
L G A+ + GC L Y L++ G L+L+ +M G +
Sbjct: 539 ALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGA 598
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
D +I GLC +G+++NA + +++ +GF P + Y+ + N L +++ A NLF
Sbjct: 599 DTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLF 658
Query: 536 RKIKI 540
++++
Sbjct: 659 DRLQV 663
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 171/373 (45%), Gaps = 6/373 (1%)
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
KSY+++++ L NV DM +GV+P + T IVM + +V A +L
Sbjct: 184 KSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRD 243
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQ 282
+ G ++ ++ L Q+ V A L M + +V T+N VI G K+ +
Sbjct: 244 MTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNK 303
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ + +++ ++ GF PD++T+ FL+ GL R G++++A ++ + P+ N
Sbjct: 304 IHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAILNT 359
Query: 343 VISNYISVGDFDECMKYY-KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I+ Y+ G E + + M ++ +P++ TY L+ GL K ++ A ++ EM R
Sbjct: 360 LINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRR 419
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G P+ T + LC G A ++ + G ++ Y L+ L K +
Sbjct: 420 GCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVA 479
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+L EM G D Y +I GLC + +++ A + L G + + Y+ L +
Sbjct: 480 LNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHA 539
Query: 522 LLASNKLESAYNL 534
LL + A L
Sbjct: 540 LLRRGAFQKALTL 552
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 201/456 (44%), Gaps = 46/456 (10%)
Query: 87 DSSRAVDEFLL----PEERLRGVFLQKLKGKGVIEDALWNVNVDLSLD---VVGKVVNRG 139
D+++ VD LL P+ G L L G + +A + + + ++ ++N
Sbjct: 306 DATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEA-RKILIKIPCPNNAILNTLINGY 364
Query: 140 NLSGE--AMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
+SG+ F N + + D+ +YN+++ L + F +++++M++ G P+
Sbjct: 365 VMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPN 424
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ T +I+++ +AG + +A +L + GL ++ N ++ LC++ V A +L +
Sbjct: 425 VITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLS 484
Query: 258 SMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
M K ++ TYN +I G K+ ++ E R+ ++ +G +++T++ LI L R G
Sbjct: 485 EMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRG 544
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
A+ + + M +GC D YN +I + VG+ ++ ++ Y+ M + +
Sbjct: 545 AFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCN 604
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+I+GL K KV +A E + ++RG VP T S L LC G A
Sbjct: 605 IMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEA---------- 654
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
L+L+ +Q G D Y I+ C G + +A
Sbjct: 655 -------------------------LNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDA 689
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
+ GF PS L ++ L LL + E+ +
Sbjct: 690 CSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNF 725
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 171/410 (41%), Gaps = 40/410 (9%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y V + LG F + +L M +EG+ I+M + +AGQ +AI++L +
Sbjct: 115 YYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMR 174
Query: 226 DFGL-KFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
L + +S ++VL L A+++F M K V V T+ IV+ +V
Sbjct: 175 AVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEV 234
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+L+++ G P+S+ + LI L + ++ +A+++ + M GC PD +N V
Sbjct: 235 DSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDV 294
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF-------- 395
I V + K M P+ TY L+ GL + K+ +A ++
Sbjct: 295 IHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNN 354
Query: 396 ------------------------EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
E M++ G P T + LC G A +
Sbjct: 355 AILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVN 414
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLC 488
+ + GC+ ++ Y +L ++G K G+L + + HEM G + IY +I LC
Sbjct: 415 EMSRRGCEPNVITYAIL---VNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALC 471
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++ A+ ++ E KG P Y+ L L ++++ A+ LF +
Sbjct: 472 RKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNM 521
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 121/270 (44%), Gaps = 38/270 (14%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL--------------------------- 198
YN ++ AL R++ N+LS+M +G PDL
Sbjct: 463 YNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNML 522
Query: 199 --------ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
T + ++ + +R G KA+ ++ + G D + N ++ C+ ++
Sbjct: 523 LDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIE 582
Query: 251 AASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
L+ M L + ++ NI+I+G K+G+V L++ + GF PD +T++ ++
Sbjct: 583 KGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVL 642
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF-DECMKYYKGMSSYNC 368
GL + GRI +A+ +FD ++ +G PD YN IS G D C +Y+G+ +
Sbjct: 643 NGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFV 702
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEM 398
N+ T+ L+ LLK + V +E+
Sbjct: 703 PSNL-TWNVLVYTLLKQSNQENNFFVLDEL 731
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 176/362 (48%), Gaps = 7/362 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
I + +V + N++V AL + D + L DM ++G+ D+ T + +++++ R G
Sbjct: 176 IARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGL 235
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
+ +A +++ + GLK + N V+ LC++ A +FN M L + TYN
Sbjct: 236 LGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNT 295
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
++ + +E + + +++ G SPD ++FS LI R G +D A+ F MK G
Sbjct: 296 LLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSG 355
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD Y +I+ Y G E ++ M C ++ Y +++GL K + +ADA
Sbjct: 356 LVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADAN 415
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+F+EM++RG+VP T T+ + C G A+ ++ + K + Y +L +
Sbjct: 416 ALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNIL---I 472
Query: 453 SGFGKCGMLL---DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
GF K + +LW+EM + Y ++ G CN+G + A + +E +RKG
Sbjct: 473 DGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIK 532
Query: 510 PS 511
P+
Sbjct: 533 PT 534
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 175/379 (46%), Gaps = 9/379 (2%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D +YN ++ R F ++ SDM GV+PDL + S ++ R G + +A+
Sbjct: 286 LSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQAL 345
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ GL D +++ C+ + A + + M + +V+ YN +++G
Sbjct: 346 MYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGL 405
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K + + + E+V G PD TF+ LI G + G + A+ +F M +K PD
Sbjct: 406 CKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDI 465
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I + + ++ + + M S PN +Y L++G V++A +++E
Sbjct: 466 VTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDE 525
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ +GI P+ T + ++ C G A K G Y L+ +GF K
Sbjct: 526 MIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLI---NGFVK 582
Query: 458 CGMLLD----LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
G +D L ++M+ G D Y ++ G C G+++ A L++ + + +G P R
Sbjct: 583 -GEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRS 641
Query: 514 VYSKLSNKLLASNKLESAY 532
Y+ L N ++ + L+ A+
Sbjct: 642 TYTTLINGYVSQDNLKEAF 660
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 158/344 (45%), Gaps = 8/344 (2%)
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++ ++ G V A ++ + G++ + +LN+++ LC+ + M+ K
Sbjct: 156 LLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKG 215
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+F +++TYN +I+ + + G + E V+ + +G P T++ +I GL + GR A
Sbjct: 216 IFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAK 275
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
VF+ M G PDT YN ++ +F E + M P++ +++ LI
Sbjct: 276 GVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVS 335
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
++ + AL F +M G+VP T + C G A+ + K + GC L +
Sbjct: 336 SRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDV 395
Query: 443 TAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
AY + L+G K +L D L+ EM E G D + +I G C G + A+ +
Sbjct: 396 VAYNTI---LNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSL 452
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
+K P + Y+ L + + ++E A L+ ++ I+R+
Sbjct: 453 FGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEM-ISRK 495
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 166/359 (46%), Gaps = 7/359 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H V+ D+ S++ ++ R D DM G+ PD +I+++ + R G +
Sbjct: 318 HRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMS 377
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
+A+++ ++ + G D + N +L LC++ + A++LF+ M + V+ + T+ +I
Sbjct: 378 EALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLI 437
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G K G + + + + + PD +T++ LI+G + ++ A E+++ M +
Sbjct: 438 HGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIF 497
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ +Y +++ Y ++G E + + M +P + T +I G +S ++ A E
Sbjct: 498 PNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEF 557
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+M+ G+ P + T + + A + K G + + Y ++ L+G
Sbjct: 558 LGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVI---LNG 614
Query: 455 FGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
F + G + + + +M E G D Y +I G + L+ A +E L++GF P
Sbjct: 615 FCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVP 673
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 153/337 (45%), Gaps = 7/337 (2%)
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KG 261
+++ S+++A ++ + L G + N +L L + V A ++N + +
Sbjct: 120 LLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARS 179
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
+ NV T NI+++ K ++ +++ L ++ +G D +T++ LI R G + +A
Sbjct: 180 GIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEA 239
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
EV ++M KG P YNAVI+ G + + M S P+ TY L+
Sbjct: 240 FEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVE 299
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
++ +A ++F +ML RG+ P + +S + G A+M ++ + G
Sbjct: 300 SCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPD 359
Query: 442 LTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
Y +L ++G+ + GM+ L++ +M E G D Y ++ GLC L +A
Sbjct: 360 NVIYTIL---INGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANA 416
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ +E + +G P ++ L + + A +LF
Sbjct: 417 LFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLF 453
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 123/316 (38%), Gaps = 35/316 (11%)
Query: 258 SMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
SM + + ++++I + + ++ E K + +GF + L+ GL + G
Sbjct: 106 SMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGW 165
Query: 318 IDDAIEVFDT-----------------------------------MKEKGCGPDTNAYNA 342
+D A EV++ M++KG D YN
Sbjct: 166 VDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNT 225
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I+ Y G E + MS +P + TY +I+GL K + A VF EML G
Sbjct: 226 LINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIG 285
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
+ P T T + L C A ++ G L ++ L+ S G L
Sbjct: 286 LSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQAL 345
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+ +M+ SG D IY +I G C G + A+ + ++ L +G + Y+ + N L
Sbjct: 346 MYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGL 405
Query: 523 LASNKLESAYNLFRKI 538
L A LF ++
Sbjct: 406 CKKKLLADANALFDEM 421
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 97/241 (40%)
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
D+L F LI +A ++++ + F ++ KG NA N+++ + +G D + Y
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
++ E N+ T +++ L K K+ D +M +GI T + + C
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
G A + G K +L Y ++ L G+ +++EM G D Y
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTY 293
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
++ C A + + L +G P + +S L + L+ A FR +K
Sbjct: 294 NTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKT 353
Query: 541 A 541
+
Sbjct: 354 S 354
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 193/438 (44%), Gaps = 18/438 (4%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L KL G++ V VD + ++ N A+ +F + I + + S
Sbjct: 212 LLDKLLSYGLV------VTVDSCNAFLSRIANNSEGIEMAIKVFCEYGI-----SWNTTS 260
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN+I+ +L R +L M PD+ + S V+D + G++ KA++++ ++
Sbjct: 261 YNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQ 320
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVG----AASSLFNSMKGKVLFNVMTYNIVISGWSKLG 281
GLK + + N ++ LC+ +G A L M K++ + + Y +I G+ KLG
Sbjct: 321 IKGLKPNRYTYNSIILLLCK---IGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLG 377
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
V + E++++ SPD +T++ LI+G G+ G++ + +F M +G PD Y
Sbjct: 378 HVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYT 437
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I Y G+ + M PN+ TY LI GL K ++ A E+ +EM +
Sbjct: 438 TLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK 497
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G+ + S + +C G A+ + K+ G Y ++ G
Sbjct: 498 GLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKA 557
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L EM + G + ++ G C +G LE+ ++ L KG P + Y+ L +
Sbjct: 558 HKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQ 617
Query: 522 LLASNKLESAYNLFRKIK 539
N + + ++++++
Sbjct: 618 HCIRNSMNTTTKIYKRMR 635
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 168/355 (47%), Gaps = 1/355 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D +Y +++ G+ N+ +M G+ PD T + ++D + +AG++ A
Sbjct: 394 ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAF 453
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
+ + G+ + + ++ LC+ + A+ L + M+ K L NV YN +++G
Sbjct: 454 SLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGI 513
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G + + +++KE+ G PD++T++ +I+ R G ID A ++ M ++G P
Sbjct: 514 CKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTV 573
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+N +++ + +G ++ + M P+ TY L+ + ++++
Sbjct: 574 VTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKR 633
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M ++G+ P + T ++ C A +YK+ + G ++T+Y L++R K
Sbjct: 634 MRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKK 693
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
+L+ EM+ G +DGEIY + + G +E + + +E++ K R
Sbjct: 694 ILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKCLLNER 748
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 159/346 (45%), Gaps = 1/346 (0%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P+ I + G + +A ++L +L +GL +S N L + G ++
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSE-GIEMAI 246
Query: 256 FNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
+ + +N +YNI+I +LG+V E R+L ++ +PD +++S +I+G
Sbjct: 247 KVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHL 306
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
G + A+++ D M+ KG P+ YN++I +G E K + M S P+ Y
Sbjct: 307 GELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVY 366
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
T LI G K V A + F+EML + I P T T+ ++ G ++ +
Sbjct: 367 TTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMIS 426
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
G K Y L+ G+ L +EM + G + Y +I GLC G+L+
Sbjct: 427 RGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDT 486
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
A +++E +KG + +Y+ + N + + +E A L +++++A
Sbjct: 487 ANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVA 532
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 79/203 (38%), Gaps = 4/203 (1%)
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL-KSRKVADAL 392
GP+ A++ + +G E K + SY +D+ +S + S + A+
Sbjct: 187 GPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAI 246
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+VF E GI +T + + LC G A + + + +Y ++
Sbjct: 247 KVFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGY 303
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G+ L L +MQ G + Y +I LC IG+ A V+ E + + P
Sbjct: 304 CHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDN 363
Query: 513 LVYSKLSNKLLASNKLESAYNLF 535
+VY+ L + + +A F
Sbjct: 364 VVYTTLIHGFFKLGHVRTANKWF 386
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 183/374 (48%), Gaps = 1/374 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+K+++ ++ A G+R+ + + ++L +M G+ P++ T +I + RAG++ +A +++
Sbjct: 229 LKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMK 288
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLG 281
R+ED G D + V++ LC + A LF MK + +TY ++ +S G
Sbjct: 289 RMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCG 348
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ ++ E+ A+G++PD +TF+ L+ L +AG ID+A + D M+++G P+ + YN
Sbjct: 349 DLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYN 408
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+IS + V D+ + + M + P TY I KS + ALE FE+M R
Sbjct: 409 TLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIR 468
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
GI P+ + L L G A +++ + + G Y ++++ S G+
Sbjct: 469 GIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEA 528
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
++L +M E+ D + +I L G+++ A + P+ + Y+ L
Sbjct: 529 IELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAG 588
Query: 522 LLASNKLESAYNLF 535
L +++ A LF
Sbjct: 589 LGKEGQVQRAMELF 602
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 168/348 (48%), Gaps = 2/348 (0%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A DV ++ ++V AL + D ++L M K+GV P+L T + ++ +R ++ A+
Sbjct: 366 APDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALD 425
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
+ +E G+ A + + + + A F MK + + N++ N + +
Sbjct: 426 LFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLA 485
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
++G++ E + + + + G +PDS+T++ +++ +AG++D+AIE+ M E C PD
Sbjct: 486 EMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDII 545
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
N++I+ G DE K + + P + TY LI+GL K +V A+E+F M
Sbjct: 546 VINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASM 605
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
G P+T T + L+ LC A+ M K + C + + ++ L +
Sbjct: 606 TGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRV 665
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
+ L+H+M++ P D ++ G+ G +E+A + E+ + +
Sbjct: 666 SDAIWLFHQMKKMLTP-DCVTLCTLLPGVVKNGLMEDAFKIAEDFVHR 712
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 188/414 (45%), Gaps = 36/414 (8%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM- 220
++ +Y + ++ LGR D C ++ M +G PD+ T ++++D+ AG++ A+++
Sbjct: 263 NIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELF 322
Query: 221 ---------------------------LGRLEDF-------GLKFDAESLNVVLWCLCQR 246
LGR+++F G D + +++ LC+
Sbjct: 323 VKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKA 382
Query: 247 LHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
++ A L + M+ + VL N+ TYN +ISG ++ ++ + + + G P + T+
Sbjct: 383 GNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTY 442
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
I+ G++GR D A+E F+ MK +G P+ A NA + + +G E + + S
Sbjct: 443 ILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKS 502
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
P+ TY ++ K+ +V +A+E+ +M + P I S + L G
Sbjct: 503 NGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDE 562
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A M+ + + + ++ Y L+ L G+ ++L+ M +G P + + ++
Sbjct: 563 AWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILD 622
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
LC +++ A+ ++ + P L ++ + + L+ ++ A LF ++K
Sbjct: 623 CLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMK 676
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 192/430 (44%), Gaps = 37/430 (8%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
MV+ FN +++ + +D+ +Y +I K L R M + G + + + + ++
Sbjct: 143 MVVVFNL-MQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLI 201
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL- 264
+++G +A++M R+ GLK ++ + ++ +R SL M+ L
Sbjct: 202 HLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLK 261
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
N+ TY I I + G++ E R++K + +G PD +T++ LI+ L AG++DDA+E+
Sbjct: 262 PNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMEL 321
Query: 325 FDTMKEKG-----------------CG------------------PDTNAYNAVISNYIS 349
F MK CG PD + +++
Sbjct: 322 FVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCK 381
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
G+ DE M PN+ TY LISGLL+ ++ DAL++F M G+VP+ T
Sbjct: 382 AGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYT 441
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
F++ G A+ ++K + G ++ A L L+ G+ +++ ++
Sbjct: 442 YILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLK 501
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
+G D Y ++ GQ++ A+ ++ + P +V + L N L + +++
Sbjct: 502 SNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVD 561
Query: 530 SAYNLFRKIK 539
A+ +F ++K
Sbjct: 562 EAWKMFCRLK 571
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 124/534 (23%), Positives = 223/534 (41%), Gaps = 71/534 (13%)
Query: 32 SNLSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSV-------K 84
+ +++N +L KN DE V L L+++++ N P+V N++ K
Sbjct: 613 NTITFNTILDCLCKN----DE--VDLALKMLYKMTTMNCMPDVLT---FNTIIHGLVIEK 663
Query: 85 RIDSS----RAVDEFLLPEERLRGVFLQKLKGKGVIEDAL---------WNVNVDLSL-- 129
R+ + + + L P+ L + G++EDA V VD
Sbjct: 664 RVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWE 723
Query: 130 DVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDM 189
D++G ++ + +G + F + V KD I+K L + K +V
Sbjct: 724 DLMGGILTQ---AGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRF 780
Query: 190 AKE-GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
KE GV P LE+ + +++ F+ G+ D + N
Sbjct: 781 TKELGVKPTLESYNFLIEGFL------------------GVHNDEMAWN----------- 811
Query: 249 VGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
LF MK +V TYN+++ K G++ E+ + ++++ P+++T +
Sbjct: 812 ------LFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNI 865
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
+I L ++ +D A+++F + P Y ++ + G +E + ++ M Y
Sbjct: 866 IIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYG 925
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
C PN Y LI+G K+ V A E+F+ M+ GI P + TS + LC G A+
Sbjct: 926 CRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDAL 985
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++K ++ G L AY L++ L + L L+ EMQ G D Y +I L
Sbjct: 986 HYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNL 1045
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
G +E A + EE G P+ Y+ L S +SAY +++++ +
Sbjct: 1046 GVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVG 1099
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 146/308 (47%), Gaps = 1/308 (0%)
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLK 291
E+ N +L L VG +FN M+ +++ ++ TY I+ G G + +
Sbjct: 124 TETCNHMLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFG 183
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
++ GF ++ +++ LI L ++G +A+E++ M +G P ++A++
Sbjct: 184 KMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRR 243
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
D + + M S +PN+ TYT I L ++ ++ +A + + M D G P T T
Sbjct: 244 DTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYT 303
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
++ LC+ G AM ++ K + K Y +L + S G G + + W EM+
Sbjct: 304 VLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEAD 363
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
GY D + ++ LC G ++ A +++ ++G P+ Y+ L + LL N+L+ A
Sbjct: 364 GYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDA 423
Query: 532 YNLFRKIK 539
+LF ++
Sbjct: 424 LDLFNNME 431
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 156/325 (48%), Gaps = 2/325 (0%)
Query: 155 KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV 214
K V ++SYN +++ + N+ ++M G PD+ T ++++D+ ++G++
Sbjct: 782 KELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKI 841
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF-NSMKGKVLFNVMTYNIV 273
+ ++ ++ K + + N+++ L + + A LF + + G TY +
Sbjct: 842 NELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPL 901
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
+ G K G++ E + + +E+V G P++ ++ LI G G+ G ++ A E+F M +G
Sbjct: 902 LDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGI 961
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
PD +Y +++ G D+ + Y++ + + Y +I GL +S ++ +AL
Sbjct: 962 RPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALT 1021
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+++EM RGI P T S + L G A +Y++ + +G + ++ Y L+R S
Sbjct: 1022 LYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYS 1081
Query: 454 GFGKCGMLLDLWHEMQESGY-PSDG 477
G ++ M G P+ G
Sbjct: 1082 MSGNSDSAYAVYKRMMVGGCSPNTG 1106
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 181/433 (41%), Gaps = 41/433 (9%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA V+F +K +A D +YN+++K + D +LSDM++ PD+ ++
Sbjct: 492 EAKVIFNR--LKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINS 549
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
++++ +AG+V +A +M RL+D L + N ++ L + V A LF SM G
Sbjct: 550 LINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNG 609
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
N +T+N ++ K +V ++L ++ PD LTF+ +I GL R+ DAI
Sbjct: 610 CPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAI 669
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG-------------------- 362
+F MK K PD ++ + G ++ K +
Sbjct: 670 WLFHQMK-KMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGG 728
Query: 363 -MSSYNCEPNMDTYTRLISG---------------LLKSRKVADALEVFEEML-DRGIVP 405
++ E + RL+ G L K ++ A VF + G+ P
Sbjct: 729 ILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKP 788
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
+ + +E A ++ + + GC + Y LLL GK L +L+
Sbjct: 789 TLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELY 848
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
+M S + + +IA L L+ A+ + + + F P+ Y L + LL S
Sbjct: 849 EQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKS 908
Query: 526 NKLESAYNLFRKI 538
+LE A LF ++
Sbjct: 909 GRLEEAKELFEEM 921
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 125/250 (50%), Gaps = 1/250 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++N+I+ L + D ++ D+ +P T ++D +++G++ +A ++ +
Sbjct: 862 THNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEM 921
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
D+G + + N+++ + V A LF M + + ++ +Y ++ + G+V
Sbjct: 922 VDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRV 981
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ +++ G DS+ ++ +I+GLGR+ RI++A+ ++D M+ +G PD YN++
Sbjct: 982 DDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSL 1041
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I N G ++ K Y+ + EPN+ TY LI G S A V++ M+ G
Sbjct: 1042 ILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGC 1101
Query: 404 VPSTGTITSF 413
P+TGT
Sbjct: 1102 SPNTGTFAQL 1111
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 1/286 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K+ A DV +YN+++ A G+ + + + M P+ T +I++ + +++
Sbjct: 816 MKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNS 875
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNI 272
+ KA+ + L + +L L + + A LF M N YNI
Sbjct: 876 LDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNI 935
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I+G+ K G V + K +V EG PD +++ L+ L AGR+DDA+ F+ +K+ G
Sbjct: 936 LINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTG 995
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
D+ AYN +I +E + Y M S P++ TY LI L + V A
Sbjct: 996 LYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAG 1055
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
+++EE+ G+ P+ T + + G +A +YK+ GC
Sbjct: 1056 KLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGC 1101
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 175/399 (43%), Gaps = 7/399 (1%)
Query: 143 GEAMVLFFNWAIK--HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
GEA+ LF + PNV +Y ++ L + +L M + PD+
Sbjct: 143 GEALHLFDKMIDEGFQPNVV----TYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVI 198
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM- 259
+ ++DS + QV +A + ++ G+ D + ++ LC ++L N M
Sbjct: 199 YTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMV 258
Query: 260 KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
K+L +V+ ++ V+ K G+V E ++ ++ G PD +T++ L++G +D
Sbjct: 259 NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMD 318
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
+A++VFD M KG PD +Y +I+ Y + D+ M ++ M P+ TY L+
Sbjct: 319 EAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLM 378
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
GL ++ DA+ +F EM+ RG +P T + L+ LC AM + K
Sbjct: 379 HGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLN 438
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+ Y +++ + G+ DL+ + G Y +I GLC G L A +
Sbjct: 439 PDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 498
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
E P Y+ ++ L +N+ A L ++
Sbjct: 499 FMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEM 537
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 186/390 (47%), Gaps = 1/390 (0%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H + + + ++ ++ + K + + ++ + M GV P++ TL+I+++SF +V
Sbjct: 49 HMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVG 108
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVI 274
A +L ++ G + D + ++ LC +G A LF+ M + NV+TY +I
Sbjct: 109 FAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLI 168
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G K+G R+L+ + PD + ++ +I+ L + ++ +A +F M +G
Sbjct: 169 NGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGIS 228
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD Y +++ ++ ++ M + P++ ++ ++ L K KV +A E+
Sbjct: 229 PDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEI 288
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ M+ RG+ P T T+ ++ C A+ ++ + G + +Y L+
Sbjct: 289 VDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCK 348
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
K + L+ EM + D + Y ++ GLC++G+L++A+ + E + +G P +
Sbjct: 349 IHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVT 408
Query: 515 YSKLSNKLLASNKLESAYNLFRKIKIARQN 544
YS L + L + LE A L + I+ + N
Sbjct: 409 YSILLDSLCKNCHLEEAMALLKAIEASNLN 438
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 162/357 (45%), Gaps = 1/357 (0%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+++ N DV Y I+ +L + + N+ S M +G++PD+ T + ++ +
Sbjct: 186 SMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLC 245
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYN 271
+ +L ++ + + D + V+ LC+ V A + + M + V +V+TY
Sbjct: 246 EWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYT 305
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
++ G ++ E +V +V +GF+PD ++++ LI G + +ID A+ +F+ M K
Sbjct: 306 TLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRK 365
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
PDT YN ++ VG + + + M + P++ TY+ L+ L K+ + +A
Sbjct: 366 EWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEA 425
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+ + + + + P ++ +C G AA ++ G S+ Y +++
Sbjct: 426 MALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHG 485
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L G L+ EM + DG Y + G + A+ ++EE L +GF
Sbjct: 486 LCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGF 542
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 162/343 (47%), Gaps = 1/343 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D+ +Y +V AL + + +L+ M + PD+ S V+D+ + G+V +A
Sbjct: 227 ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAH 286
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+++ + G++ D + ++ C + + A +F+ M K +V++Y +I+G+
Sbjct: 287 EIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGY 346
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K+ ++ + + +E+ + + PD+ T++ L+ GL GR+ DAI +F M +G PD
Sbjct: 347 CKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDL 406
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y+ ++ + +E M K + + N P++ Y +I G+ ++ ++ A ++F
Sbjct: 407 VTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSN 466
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ +G+ PS T + LC G + A ++ + C Y + R +
Sbjct: 467 LSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNE 526
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+ L EM G+ +D ++ L + G +++ +M
Sbjct: 527 TLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLDQSSCFLM 569
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+++ N S + D+ + + + + P++ + +L++ + K + + L +
Sbjct: 21 SSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLST 80
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+M G+ P+ T+ + C A + K K+G + T + L+R L G
Sbjct: 81 QMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEG 140
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRLVY 515
K G L L+ +M + G+ + Y +I GLC +G A+ ++ S+ +G C P ++Y
Sbjct: 141 KIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLL-RSMEQGNCQPDVVIY 199
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
+ + + L ++ A+NLF ++
Sbjct: 200 TSIIDSLCKDRQVTEAFNLFSQM 222
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/150 (19%), Positives = 59/150 (39%)
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
DAL F +L PS L + + + + G ++ +L+
Sbjct: 39 DALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILI 98
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
+ G + ++ + G+ D + +I GLC G++ A+ + ++ + +GF
Sbjct: 99 NSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQ 158
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P+ + Y L N L +A L R ++
Sbjct: 159 PNVVTYGTLINGLCKVGNTSAAIRLLRSME 188
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 166/378 (43%), Gaps = 1/378 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V +Y IV A + + C +L+ M G P++ T + ++ F G+V+ A+ M
Sbjct: 256 NVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMW 315
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
+ D G S NV++ LC + A FNSMK L N TY+ ++ G+S
Sbjct: 316 HWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNA 375
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + + E+ + G P+ + ++ +I+ L + D A + D M C P+T +
Sbjct: 376 GDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTF 435
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I G + + GM C PN TY L+ GL + DA + EML+
Sbjct: 436 NTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLN 495
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G S T + + LC AM++ + G + + ++ GK +
Sbjct: 496 NGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSI 555
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L +M P + Y +I+ LCN G+L NA++ + + L +G CP+ ++ L
Sbjct: 556 AACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVR 615
Query: 521 KLLASNKLESAYNLFRKI 538
+ + +LF+ I
Sbjct: 616 AIFTNIGTIGPIHLFKYI 633
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 188/393 (47%), Gaps = 22/393 (5%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
R N+ G + ++ N ++ V +V +YN++++AL + D +L +M+++G +PD
Sbjct: 134 RENMVGAVVPVYDN--MRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPD 191
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ ++ + G+V +A L E ++ S N V+ LC + S+ N
Sbjct: 192 EVSHGTIVSGMCKLGRVEEARGFLA--ETVPVQ---ASYNAVVHALCGEFRMWEVFSVVN 246
Query: 258 SMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
M + L NV+TY ++ + K ++ +L +V+ G +P+ LTF+ L++G G
Sbjct: 247 EMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDG 306
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
++ DA+ ++ M ++G P T +YN +I +GD + ++ M PN TY+
Sbjct: 307 KVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYS 366
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
L+ G + + A+ ++ EM G P+ T+ ++ LC MM+ +A +
Sbjct: 367 TLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKK-------MMFDQAESL 419
Query: 437 -------GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
C + + L+ RL G+ G L+++H M+ +G + Y ++ GL
Sbjct: 420 IDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFR 479
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
G ++A ++ E L GF S + Y+ + N L
Sbjct: 480 EGNHKDAFAMVIEMLNNGFELSLVTYNTVINCL 512
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 174/415 (41%), Gaps = 32/415 (7%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
P + + V+ L D + L +M GV + L + +F RAG +
Sbjct: 45 PGSGDSARHHEATVRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADR 104
Query: 217 AIQMLGRLEDFGLKFDAESL-NVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVI 274
A++ R D G + + N +L L + VGA ++++M K V NV TYN++I
Sbjct: 105 ALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLI 164
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA------------- 321
+ +V ++L E+ +G PD ++ ++ G+ + GR+++A
Sbjct: 165 RALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQAS 224
Query: 322 -----------------IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
V + M ++G P+ Y ++ + + M
Sbjct: 225 YNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMV 284
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
S C PN+ T+T L+ G + KV DAL ++ M+D G PST + + LC G
Sbjct: 285 SMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLK 344
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A+ + ++ + T Y L+ S G + +W+EM+ SG + +Y +I
Sbjct: 345 GALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMI 404
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
LC + A ++++ L P+ + ++ L +L ++ A N+F ++
Sbjct: 405 DVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMR 459
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 111/266 (41%), Gaps = 6/266 (2%)
Query: 137 NRGNLSGEAMVLFFNW-AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
N G+L G ++ W +K +V Y ++ L ++ FD +++ M +
Sbjct: 374 NAGDLDGAMLI----WNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCP 429
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL-HVGAASS 254
P+ T + ++ G+V +A+ + + G + + N +L L + H A +
Sbjct: 430 PNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAM 489
Query: 255 LFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
+ + +++TYN VI+ ++ +L ++ +G PD+ TF+ +I +
Sbjct: 490 VIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCK 549
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G++ A + M C + AY +IS + G M Y M PN T
Sbjct: 550 EGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEAT 609
Query: 375 YTRLISGLLKSRKVADALEVFEEMLD 400
+ L+ + + + +F+ +++
Sbjct: 610 WNVLVRAIFTNIGTIGPIHLFKYIVE 635
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 178/391 (45%), Gaps = 27/391 (6%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
P+ + K + +A+ K F + +M GVNPD+ T +I++DSF +AG + +
Sbjct: 286 PDTSTYSKVITFLCEAMKVEKAF----LLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQ 341
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVIS 275
A + G + + +L + + AS +FN M N +TY+ ++
Sbjct: 342 ARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVD 401
Query: 276 GWSKLGQVVEMERVLKEIVA----------------EGFSPDSLTFSFLIEGLGRAGRID 319
G K G++ + V +++ + +P+ +T+ LI+GL +A ++
Sbjct: 402 GLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVV 461
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
DA E+ D M GC P+ Y+A+I + VG D + + MS P + TYT LI
Sbjct: 462 DAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLI 521
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
+ K R++ A++V +M++ P+ T T+ ++ LC G A+ + + GC
Sbjct: 522 DAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCS 581
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
++ Y L+ L GK + L L+ +M G + Y +I C G L+ A +
Sbjct: 582 PNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSL 641
Query: 500 MEESLRKGFCPSRL-----VYSKLSNKLLAS 525
+ E +++ + P L V S K +AS
Sbjct: 642 LSE-MKQTYWPKYLQGYCSVVQGFSKKFIAS 671
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 165/378 (43%), Gaps = 17/378 (4%)
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNV 238
FD ++ M +G PD T S V+ A +V KA + ++ G+ D + +
Sbjct: 269 FDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTI 328
Query: 239 VLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
++ C+ + A S F+ M+ NV+TY ++ + K Q+ + + ++ G
Sbjct: 329 LIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAG 388
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEV----------------FDTMKEKGCGPDTNAYN 341
P+++T+S L++GL +AG I A EV F+ P+ Y
Sbjct: 389 CPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYG 448
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A+I + + M S CEPN Y LI G K K+ +A EVF M
Sbjct: 449 ALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKC 508
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G +P+ T TS ++ + AM + + + C ++ Y ++ L G+C
Sbjct: 509 GYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKA 568
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L L M+E G + Y +I GL G+++ ++ + + KG P+ + Y L N
Sbjct: 569 LKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINH 628
Query: 522 LLASNKLESAYNLFRKIK 539
A+ L+ A++L ++K
Sbjct: 629 CCAAGLLDEAHSLLSEMK 646
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 205/468 (43%), Gaps = 39/468 (8%)
Query: 104 GVFLQKLKGKGVIEDALWNVN-VDLSLDVVGKVVNRGNLSGEAMVLFFNWAI------KH 156
G F Q L +G DAL + D LD V + +SG F+ AI +
Sbjct: 79 GCFAQALCKEGRWSDALVMIEREDFKLDTV---LCTQMISGLMEASLFDEAISFLHRMRC 135
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
+ +V +Y ++ ++K + +++ M KEG NP+ + ++ S+ A
Sbjct: 136 NSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPY 195
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA------ASSLFNSMKGK--VLFNVM 268
A ++L R+ D G + N+ + +C + + A ++ M VL V
Sbjct: 196 AYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVN 255
Query: 269 TYNI--VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
T N + G K + ++K ++ +GF PD+ T+S +I L A +++ A +F
Sbjct: 256 TANFARCLCGMGKFDMAFQ---IIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQ 312
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
MK G PD Y +I ++ G ++ ++ M S C N+ TYT L+ LK++
Sbjct: 313 EMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAK 372
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK----ARKVGCKL-- 440
++ A ++F M+D G P+T T ++ ++ LC G A +Y K + VG
Sbjct: 373 QLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYF 432
Query: 441 ----------SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
++ Y L+ L K +L M +G + IY+ +I G C +
Sbjct: 433 EGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKV 492
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G+++NA V + G+ P+ Y+ L + + +L+ A + ++
Sbjct: 493 GKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQM 540
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 185/433 (42%), Gaps = 53/433 (12%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +V +Y ++ A + K ++ + M G P+ T S ++D +AG++ KA
Sbjct: 354 CSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKAC 413
Query: 219 QMLGRL--------EDF---GLKFDAESLNVVLWC-----LCQRLHVGAASSLFNSM-KG 261
++ +L DF G D+ + NVV + LC+ V A L ++M
Sbjct: 414 EVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSN 473
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
N + Y+ +I G+ K+G++ + V + G+ P T++ LI+ + + R+D A
Sbjct: 474 GCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLA 533
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
++V M E C P+ Y A+I +G+ + +K M C PN+ TYT LI G
Sbjct: 534 MKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDG 593
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG---PPHAAMMMYKK------ 432
L KS KV +L++F +M +G P+ T + C+ G H+ + K+
Sbjct: 594 LGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKY 653
Query: 433 -----------ARKVGCKLSL-------------TAYKLLLRRLSGFGKCGMLLDLWHEM 468
++K L L Y LL+ S G+ L+L EM
Sbjct: 654 LQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEM 713
Query: 469 QE---SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
E S + ++Y +I LC QLE A + E RKG P V+ L L+
Sbjct: 714 MELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKV 773
Query: 526 NKLESAYNLFRKI 538
NK A L I
Sbjct: 774 NKWNEALQLCYSI 786
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 122/277 (44%), Gaps = 9/277 (3%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TYN ++ + GQ+ RV KE+ GF D T + L + GR DA+ + +
Sbjct: 42 TYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVMIERE 101
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
K DT +IS + FDE + + M +C PN+ TY L++G LK +++
Sbjct: 102 DFK---LDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQL 158
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+ M+ G P+ S + C+ A + K+ GC AY +
Sbjct: 159 GWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIF 218
Query: 449 LRRLSGFGKCGM--LLDLWHEMQESGYPSDGEIYEYVIAG----LCNIGQLENAVLVMEE 502
+ + G + LL L ++ E S + + A LC +G+ + A +++
Sbjct: 219 IGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKV 278
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ KGF P YSK+ L + K+E A+ LF+++K
Sbjct: 279 MMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMK 315
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +Y ++ A+ + + D VLS M + P++ T + ++D R G+ KA+++L
Sbjct: 514 VHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLS 573
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+E+ G + + ++ L + V + LF M K N +TY ++I+ G
Sbjct: 574 MMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAG 633
Query: 282 QVVEMERVLKEI--------------VAEGFS-------------------PDSLTFSFL 308
+ E +L E+ V +GFS P + + L
Sbjct: 634 LLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLL 693
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA---YNAVISNYISVGDFDECMKYYKGMSS 365
I+ +AGR+++A+E+ M E + + Y ++I ++ + Y ++
Sbjct: 694 IDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITR 753
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
P + + LI GL+K K +AL++ + D G+
Sbjct: 754 KGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGV 791
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 177/375 (47%), Gaps = 13/375 (3%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
++SYN+ ++ L R F VL M +G+ P + + +I+MD + G + A ++G
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG 385
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLG 281
++ G+ DA + +L C V AA SL M + L N T NI++ +G
Sbjct: 386 LMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMG 445
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ E E +L+++ +G+ D++T + +++GL +G +D AIE+ M+ G N N
Sbjct: 446 RISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGN 505
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+ YI + D + NC P++ TY+ L++GL K+ + A+A +F EM+
Sbjct: 506 S----YIGLVD--------DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGE 553
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
+ P + F+ C G +A + K K GC SL Y L+ L + +
Sbjct: 554 KLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEI 613
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L EM+E G + Y I LC G++E+A +++E ++K P+ + L
Sbjct: 614 HGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGA 673
Query: 522 LLASNKLESAYNLFR 536
+ A +F
Sbjct: 674 FCKVPDFDMAQEVFE 688
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 177/402 (44%), Gaps = 28/402 (6%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN IV + R D ++ M +EG+ PD+ T + + + + G+V A ++ +E
Sbjct: 220 YNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279
Query: 226 ---DFGL-KFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
GL + ++ + N++L C+ + A +LF S++ L ++ +YNI + G +
Sbjct: 280 LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRH 339
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ +E E VLK+++ +G P +++ L++GL + G + DA + MK G PD Y
Sbjct: 340 GKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTY 399
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++ Y SVG D + M NC PN T L+ L ++++A E+ +M +
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNE 459
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG----------------------- 437
+G T T ++ LC G A+ + K R G
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENN 519
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
C L Y LL L G+ L+ EM D Y I C G++ +A
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAF 579
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
V+++ +KG S Y+ L L N++ + L +++
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMR 621
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 181/423 (42%), Gaps = 32/423 (7%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K V+ D +Y ++ D ++L +M + P+ T +I++ S G+
Sbjct: 387 MKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGR 446
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLC--------------QRLHVGAA-SSLFNS 258
+ +A ++L ++ + G D + N+++ LC R+H AA +L NS
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506
Query: 259 MKGKV---------LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
G V L +++TY+ +++G K G+ E + + E++ E PDSL ++ I
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFI 566
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
+ G+I A V M++KGC YN++I E M
Sbjct: 567 HHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGIS 626
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
PN+ TY I L + KV DA + +EM+ + I P+ + + C A +
Sbjct: 627 PNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEV 686
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
++ A + C Y L+ L G+ +L + + G+ +Y+ ++ LC
Sbjct: 687 FETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCK 745
Query: 490 IGQLENAVLVMEESLRK--GFCPSRLV-----YSKLSNKLLASNKLESAYNLFRKIKIAR 542
+LE A ++ + + K GF P+ L+ K+ NK A+N E + ++A
Sbjct: 746 KDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMMEMASVGEVAN 805
Query: 543 QND 545
+ D
Sbjct: 806 KVD 808
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 195/447 (43%), Gaps = 63/447 (14%)
Query: 155 KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV 214
+ P + YNV++++ R + +F+ + DM G++P+ T ++++ + + V
Sbjct: 104 RFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCV 163
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIV 273
A ++ + + G K + + +++ C+ L NSM+ VL N + YN +
Sbjct: 164 DAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTI 223
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK-EKG 332
+S + + G+ + E++++++ EG PD +TF+ I L + G++ DA +F M+ ++
Sbjct: 224 VSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEY 283
Query: 333 CG---PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
G P++ YN ++ + VG ++ ++ + + ++ +Y + GL++ K
Sbjct: 284 LGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFI 343
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
+A V ++M+D+GI PS + ++ LC G A + ++ G Y LL
Sbjct: 344 EAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLL 403
Query: 450 RRLSGFGK----------------------CGMLL-DLWH------------EMQESGYP 474
GK C +LL LW+ +M E GY
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYG 463
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLV----------------------MEESLRKGFC-PS 511
D ++ GLC G+L+ A+ + +++SL + C P
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPD 523
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
+ YS L N L + + A LF ++
Sbjct: 524 LITYSTLLNGLCKAGRFAEAKTLFAEM 550
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 140/333 (42%), Gaps = 42/333 (12%)
Query: 248 HVGAASSLFNSMKGKVLFN---VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
H+ A F ++ + N + YN+++ + +V + + K++V G SP++ T
Sbjct: 90 HIDKAFPQFQFVRSRFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYT 149
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
F+ LI L + +D A E+FD M EKGC P+ + ++ Y G D+ ++ M
Sbjct: 150 FNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSME 209
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP-- 422
S+ PN Y ++S + + D+ ++ E+M + G+VP T S + LC G
Sbjct: 210 SFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVL 269
Query: 423 -----------------PHAAMMMYKKARKVGCK--------------------LSLTAY 445
P + Y K CK +SL +Y
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSY 329
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+ L+ L GK + +M + G Y ++ GLC +G L +A ++ R
Sbjct: 330 NIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR 389
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P + Y L + + K+++A +L +++
Sbjct: 390 NGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEM 422
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 167/384 (43%), Gaps = 5/384 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PNV +Y IV A + + C +L+ M G P++ T + ++ F G+V+
Sbjct: 201 QPNVV----TYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVH 256
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVI 274
A+ M + D G S NV++ LC + A FNSMK L N TY+ ++
Sbjct: 257 DALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLV 316
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+S G + + E+ + G P+ + ++ +I+ L + D A + D M C
Sbjct: 317 DGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCP 376
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+T +N +I G + + GM C PN TY L+ GL + DA +
Sbjct: 377 PNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAM 436
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
EML+ G S T + + LC AM++ + G + + ++
Sbjct: 437 VIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCK 496
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK + L +M P + Y +I+ LCN G+L NA++ + + L +G CP+
Sbjct: 497 EGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEAT 556
Query: 515 YSKLSNKLLASNKLESAYNLFRKI 538
++ L + + +LF+ I
Sbjct: 557 WNVLVRAIFTNIGTIGPIHLFKYI 580
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 182/386 (47%), Gaps = 8/386 (2%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
R N+ G + ++ N ++ V +V +YN++++AL + D +L +M+++G +PD
Sbjct: 81 RENMVGAVVPVYDN--MRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPD 138
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ ++ + G+V +A L S N V+ LC + S+ N
Sbjct: 139 EVSHGTIVSGMCKLGRVEEARGFLAETVPV-----QASYNAVVHALCGEFRMWEVFSVVN 193
Query: 258 SMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
M + L NV+TY ++ + K ++ +L +V+ G +P+ LTF+ L++G G
Sbjct: 194 EMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDG 253
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
++ DA+ ++ M ++G P T +YN +I +GD + ++ M PN TY+
Sbjct: 254 KVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYS 313
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
L+ G + + A+ ++ EM G P+ T+ ++ LC A + K
Sbjct: 314 TLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMD 373
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
C + + L+ RL G+ G L+++H M+ +G + Y ++ GL G ++A
Sbjct: 374 NCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDA 433
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKL 522
++ E L GF S + Y+ + N L
Sbjct: 434 FAMVIEMLNNGFELSLVTYNTVINCL 459
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 166/386 (43%), Gaps = 32/386 (8%)
Query: 186 LSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESL-NVVLWCLC 244
L +M GV + L + +F RAG +A++ R D G + + N +L L
Sbjct: 21 LQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALL 80
Query: 245 QRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ VGA ++++M K V NV TYN++I + +V ++L E+ +G PD +
Sbjct: 81 RENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEV 140
Query: 304 TFSFLIEGLGRAGRIDDA------------------------------IEVFDTMKEKGC 333
+ ++ G+ + GR+++A V + M ++G
Sbjct: 141 SHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGL 200
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
P+ Y ++ + + M S C PN+ T+T L+ G + KV DAL
Sbjct: 201 QPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALS 260
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
++ M+D G PST + + LC G A+ + ++ + T Y L+ S
Sbjct: 261 MWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFS 320
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
G + +W+EM+ SG + +Y +I LC + A ++++ L P+ +
Sbjct: 321 NAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTV 380
Query: 514 VYSKLSNKLLASNKLESAYNLFRKIK 539
++ L +L ++ A N+F ++
Sbjct: 381 TFNTLIGRLCDCGRVGRALNVFHGMR 406
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 115/331 (34%), Gaps = 66/331 (19%)
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA------------- 321
G G V ++ L+E+ G + I RAG D A
Sbjct: 6 GGLPAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCR 65
Query: 322 -----------------------IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
+ V+D M++ G P+ YN +I D K
Sbjct: 66 DPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARK 125
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA--------------------------- 391
MS C P+ ++ ++SG+ K +V +A
Sbjct: 126 MLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRM 185
Query: 392 ---LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
V EM+ RG+ P+ T T+ ++ C A + + +GC ++ + L
Sbjct: 186 WEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTAL 245
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
++ GK L +WH M + G+ Y +I GLC IG L+ A+ R
Sbjct: 246 VKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNAL 305
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P+ YS L + + L+ A ++ ++K
Sbjct: 306 LPNATTYSTLVDGFSNAGDLDGAMLIWNEMK 336
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 111/266 (41%), Gaps = 6/266 (2%)
Query: 137 NRGNLSGEAMVLFFNW-AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
N G+L G ++ W +K +V Y ++ L ++ FD +++ M +
Sbjct: 321 NAGDLDGAMLI----WNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCP 376
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL-HVGAASS 254
P+ T + ++ G+V +A+ + + G + + N +L L + H A +
Sbjct: 377 PNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAM 436
Query: 255 LFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
+ + +++TYN VI+ ++ +L ++ +G PD+ TF+ +I +
Sbjct: 437 VIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCK 496
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G++ A + M C + AY +IS + G M Y M PN T
Sbjct: 497 EGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEAT 556
Query: 375 YTRLISGLLKSRKVADALEVFEEMLD 400
+ L+ + + + +F+ +++
Sbjct: 557 WNVLVRAIFTNIGTIGPIHLFKYIVE 582
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 194/398 (48%), Gaps = 7/398 (1%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
E+ L+F PN+ ++YN+++K R+K FD +L+ M +G +PD+ +
Sbjct: 108 AESFFLYFETMGLSPNL----QTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYG 163
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS-MKG 261
+++S + G + A+++ + + G+ D N+++ ++ + AS ++ +KG
Sbjct: 164 TLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKG 223
Query: 262 KVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
++ N+ +YN++I+G K G+ E + + D T+S LI GL +G +D
Sbjct: 224 PSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDG 283
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A V+ M E G PD YN +++ Y+ G +EC++ +K M C + +Y LI
Sbjct: 284 ATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIR 342
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
GL ++ KV +A+ ++E + ++ + T + LC G + A+ + ++A L
Sbjct: 343 GLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL 402
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
AY ++ L G+ + + +M + G + + VI G +LE+A+
Sbjct: 403 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFF 462
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ KG P+ + Y+ L N L + + AY L +++
Sbjct: 463 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 500
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 180/380 (47%), Gaps = 37/380 (9%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
+D+ +Y+ ++ L D V +MA+ GV+PD+ + +++ ++RAG++ + ++
Sbjct: 262 GQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE 321
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
+ +E G + S N+++ L + V A S++ + K + MTY +++ G
Sbjct: 322 LWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 380
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G + + +L+E D+ +S +I GL R GR+D+ V D M + GC P+
Sbjct: 381 KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPY 440
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
NAVI+ ++ ++ ++++ M S C P + TY LI+GL K+ + ++A + +EM
Sbjct: 441 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 500
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
L +G P ++ Y LL+ L K
Sbjct: 501 LQKGWKP-----------------------------------NMITYSLLMNGLCQGKKL 525
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
M L+LW + E G+ D +++ +I GLC+ G++E+A+ + E ++ P+ + ++ L
Sbjct: 526 DMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTL 585
Query: 519 SNKLLASNKLESAYNLFRKI 538
E A ++ I
Sbjct: 586 MEGFYKVRDFERASKIWDHI 605
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 153/365 (41%), Gaps = 39/365 (10%)
Query: 203 IVMDSFIRAGQVYKAIQMLGRL-EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+V ++ + +A+ + R+ E FG + S N +L L + A S F +
Sbjct: 58 LVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 117
Query: 262 KVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
L N+ TYNI+I + Q + + +L + +GFSPD ++ LI L + G + D
Sbjct: 118 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSD 177
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGD---------------------------- 352
A+++FD M E+G PD YN +I + GD
Sbjct: 178 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 237
Query: 353 --------FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
FDE + + M ++ TY+ LI GL S + A V++EM + G+
Sbjct: 238 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 297
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P + L G + ++K K GC+ ++ +Y +L+R L K + +
Sbjct: 298 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISI 356
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
W + E +D Y ++ GLC G L A+ ++EE+ YS + N L
Sbjct: 357 WELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCR 416
Query: 525 SNKLE 529
+L+
Sbjct: 417 EGRLD 421
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 130/250 (52%), Gaps = 3/250 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +Y+ ++ L R D + VL M K G P+ + V++ F+RA ++ A++
Sbjct: 403 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFF 462
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
G + G + N ++ L + A +L M K N++TY+++++G +
Sbjct: 463 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQ- 521
Query: 281 GQVVEME-RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G+ ++M + + + +GF PD + +I GL +G+++DA++++ MK++ C P+
Sbjct: 522 GKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVT 581
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
+N ++ + V DF+ K + + Y +P++ +Y + GL +++DA+ + +
Sbjct: 582 HNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAV 641
Query: 400 DRGIVPSTGT 409
DRG++P+ T
Sbjct: 642 DRGVLPTAIT 651
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 100/194 (51%), Gaps = 1/194 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +YN ++ L + + F ++ +M ++G P++ T S++M+ + ++ A+ +
Sbjct: 474 VVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWC 533
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+ + G K D + N+++ LC V A L++ MK + + N++T+N ++ G+ K+
Sbjct: 534 QALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVR 593
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ I+ G PD ++++ ++GL RI DA+ + ++G P +N
Sbjct: 594 DFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWN 653
Query: 342 AVISNYISVGDFDE 355
++ Y+++ + E
Sbjct: 654 ILVQGYLALKGYME 667
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 193/425 (45%), Gaps = 37/425 (8%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI--- 218
D+ + N+++ F +VL+++ K G +P+ TL+ ++ G++ KA+
Sbjct: 97 DLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFH 156
Query: 219 --------------------------------QMLGRLEDFGLKFDAESLNVVLWCLCQR 246
++L +LE +K D N ++ LC+
Sbjct: 157 DQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKN 216
Query: 247 LHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
+G A L++ M K + NV+TYN ++ G+ +G + E +L E+ + +PD TF
Sbjct: 217 KLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTF 276
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LI+ LG+ G++ A V M + PD YN++I Y + + M+
Sbjct: 277 NTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQ 336
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
PN+ TYT +I GL K + V +A+ +FEEM + ++P T TS ++ LC
Sbjct: 337 SGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLER 396
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ + KK ++ G + + +Y +LL L G+ + + + GY + + Y +I
Sbjct: 397 AIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMIN 456
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQND 545
GLC A+ + + KG P + + + L ++ + A + R++ IAR
Sbjct: 457 GLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREM-IARGLQ 515
Query: 546 YARRL 550
AR++
Sbjct: 516 EARKV 520
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 177/389 (45%), Gaps = 26/389 (6%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EAM LF +K+ N+ D+ +Y ++ L + + + M ++G+ PD+ + +I
Sbjct: 361 EAMSLF--EEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTI 418
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
++D+ + G++ A + RL G + ++ NV++ LC+ G A L + M+GK
Sbjct: 419 LLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKG 478
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS----------------------- 299
+ + +T+ +I + + + E++L+E++A G
Sbjct: 479 CMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIK 538
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
PD +T+ L++G + A VF +M + G P+ Y +I DE M
Sbjct: 539 PDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSL 598
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
++ M N PN+ TYT LI L K+ + A+ + +EM + GI P + T L+ LC
Sbjct: 599 FEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCK 658
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
G A ++++ G L++ Y ++ L G LDL +M++ G D
Sbjct: 659 SGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVT 718
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGF 508
++ +I L + + A ++ E + +G
Sbjct: 719 FDIIIWALFEKDENDKAEKILXEMIARGL 747
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 179/410 (43%), Gaps = 26/410 (6%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K N+ DV ++N ++ ALG+ VL+ M K + PD+ T + ++D + +
Sbjct: 264 MKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNK 323
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
V A + + G+ + + ++ LC+ V A SLF MK K ++ +++TY
Sbjct: 324 VKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTS 383
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G K + + K++ +G PD +++ L++ L + GR+++A E F + KG
Sbjct: 384 LIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKG 443
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
+ YN +I+ F E M M C P+ T+ +I L + + A
Sbjct: 444 YHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAE 503
Query: 393 EVFEEMLDRG-------------IVPSTGTITSFLEPLCSYGP-----------PHAAMM 428
++ EM+ RG IV + T + +YG HA +
Sbjct: 504 KILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYV 563
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
Y A+ +G ++ Y +++ L + L+ EM+ + Y +I LC
Sbjct: 564 FYSMAQ-MGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALC 622
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
LE A+ +++E G P Y+ L + L S +LE A +F+++
Sbjct: 623 KNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRL 672
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 162/374 (43%), Gaps = 1/374 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
+N I+ +L K + + ++ G PDL TL+I+M+ F + A +L +
Sbjct: 66 FNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANIL 125
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
G +A +LN ++ LC R + A + + + N ++Y +I+G K G+
Sbjct: 126 KRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETK 185
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ R+L+++ PD + ++ +I L + + DA +++ M KG P+ YNA++
Sbjct: 186 AVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALV 245
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ +G E M N P++ T+ LI L K K+ A V M+ I
Sbjct: 246 YGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIK 305
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P T S ++ A ++ + G ++ Y ++ L + L
Sbjct: 306 PDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSL 365
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+ EM+ D Y +I GLC LE A+ + ++ +G P Y+ L + L
Sbjct: 366 FEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCK 425
Query: 525 SNKLESAYNLFRKI 538
+LE+A F+++
Sbjct: 426 GGRLENAKEFFQRL 439
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 1/221 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
VL+ M K + PD+ T +MD + ++ A + + G+ + + +++ LC
Sbjct: 528 VLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLC 587
Query: 245 QRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
++ V A SLF MK K +F N++TY +I K + +LKE+ G PD
Sbjct: 588 KKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVY 647
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
+++ L++GL ++GR++ A E+F + KG + Y A+I+ G FDE + M
Sbjct: 648 SYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKM 707
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
C P+ T+ +I L + + A ++ EM+ RG++
Sbjct: 708 EDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLM 748
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 142/340 (41%), Gaps = 36/340 (10%)
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
N +L L H SLF + ++ T NI+++ + L + VL I+
Sbjct: 66 FNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANIL 125
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
G+ P+++T + LI+GL G I A+ D + +G + +Y +I+ G+
Sbjct: 126 KRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETK 185
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ + + ++ +P++ Y +I L K++ + DA +++ EM+ +GI P+ T + +
Sbjct: 186 AVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALV 245
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK--------------C-- 458
C G A + + + + + L+ L GK C
Sbjct: 246 YGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIK 305
Query: 459 ------GMLLD-------------LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
L+D +++ M +SG + Y +I GLC ++ A+ +
Sbjct: 306 PDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSL 365
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
EE K P + Y+ L + L ++ LE A L +K+K
Sbjct: 366 FEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMK 405
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 97/224 (43%)
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A+ FD M P T +N ++S+ ++ + + +K S P++ T L++
Sbjct: 47 AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
+ A V +L RG P+ T+ + ++ LC G A+ + + G +L
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+ +Y+ L+ L G+ + L +++ D +Y +I LC L +A +
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
E + KG P+ + Y+ L L+ A++L ++K+ N
Sbjct: 227 SEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNIN 270
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 187/426 (43%), Gaps = 39/426 (9%)
Query: 117 EDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRR 176
E AL + + L + +V +V+ + ++ + FF WA K N D +Y +++ L
Sbjct: 80 EKALEVLKLKLDIRLVREVL-KIDVEVHVKIQFFKWAGKKRNFEHDSTTYMALIRCLDEN 138
Query: 177 KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESL 236
+ + + DM K I ++ + +++LGR++
Sbjct: 139 RLVGELWRTIQDMVKSPCA-------------IGPSELSEIVKILGRVK----------- 174
Query: 237 NVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
V A S+F +KG K TYN VI + G ++ + E+ +
Sbjct: 175 -----------MVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCS 223
Query: 296 EGFS-PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
EG PD++T+S LI G+ R D A+ +FD MKE G P Y ++ Y +G +
Sbjct: 224 EGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVE 283
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E + M C P + TYT LI GL KS +V DA V++ ML G P + + +
Sbjct: 284 EALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLI 343
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE-MQESGY 473
L A+ ++++ R + C ++ Y +++ L W E M++ G
Sbjct: 344 NILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGV 403
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
Y +I G C ++E A+L++EE KGF P Y L N L + + E+A
Sbjct: 404 VPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANE 463
Query: 534 LFRKIK 539
LF+++K
Sbjct: 464 LFQELK 469
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 194/417 (46%), Gaps = 11/417 (2%)
Query: 129 LDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSD 188
L + K++ R + +A+ +F+ +K +YN ++ L + + + + ++
Sbjct: 163 LSEIVKILGRVKMVNKALSIFYQ--VKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNE 220
Query: 189 MAKEG-VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
M EG PD T S ++ +F + + A+++ +++ GL+ A+ ++ +
Sbjct: 221 MCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLG 280
Query: 248 HVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
V A +L + M+ + + V TY +I G K G+V + V K ++ +G PD + +
Sbjct: 281 KVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMN 340
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN-YISVGDFDECMKYYKGMSS 365
LI LGR+ R+ +A+E+F+ M+ C P+ YN +I + + E + + M
Sbjct: 341 NLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKK 400
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
P+ TY+ LI G K+ +V AL + EEM ++G P S + L A
Sbjct: 401 DGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEA 460
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEY 482
A ++++ ++ S+ Y ++++ FGKCG + L++EM++ G D Y
Sbjct: 461 ANELFQELKENCGSSSVRVYAVMIKH---FGKCGRFNEAMGLFNEMKKLGCIPDVYAYNA 517
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I G+ ++ A + G P ++ + N L + + A +F K+K
Sbjct: 518 LITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMK 574
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 153/335 (45%), Gaps = 2/335 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +Y +++ LG+ + V +M K+G PD+ ++ +++ R+ ++ +A+++
Sbjct: 301 VYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFE 360
Query: 223 RLEDFGLKFDAESLNVVLWCLCQ-RLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ + + N ++ L + + ASS MK V+ + TY+I+I G+ K
Sbjct: 361 EMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKT 420
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+V + +L+E+ +GF P + LI LG+A R + A E+F +KE Y
Sbjct: 421 NRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVY 480
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+I ++ G F+E M + M C P++ Y LI+G++++ + +A +F M +
Sbjct: 481 AVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEE 540
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G P + L L G P AM M+ K + K +Y +L LS G
Sbjct: 541 NGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEE 600
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
L EM G+ D Y ++ + + + N
Sbjct: 601 ATKLMKEMNSKGFEYDLITYSSILEAVGKVDEDRN 635
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 172/410 (41%), Gaps = 40/410 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +Y+ ++ A G+ D + +M + G+ P + + +M + + G+V +A+ ++
Sbjct: 230 DTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLV 289
Query: 222 -------------------------GRLEDF----------GLKFDAESLNVVLWCLCQR 246
GR+ED G K D +N ++ L +
Sbjct: 290 HEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRS 349
Query: 247 LHVGAASSLFNSMKG-KVLFNVMTYNIVI-SGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
+ A LF M+ NV+TYN +I S + E L+ + +G P S T
Sbjct: 350 DRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFT 409
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
+S LI+G + R++ A+ + + M EKG P AY ++I++ ++ + ++ +
Sbjct: 410 YSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELK 469
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
++ Y +I K + +A+ +F EM G +P + + +
Sbjct: 470 ENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMD 529
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A +++ + GC + ++ ++L L+ G ++++ +M+ S D Y V+
Sbjct: 530 EAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVL 589
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
L G E A +M+E KGF + YS + L A K++ N+
Sbjct: 590 GCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSI---LEAVGKVDEDRNM 636
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 78/177 (44%), Gaps = 1/177 (0%)
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
N E + TY LI L ++R V + ++M+ ++ ++ L + A
Sbjct: 120 NFEHDSTTYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMVNKA 179
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP-SDGEIYEYVIA 485
+ ++ + + C+ + Y ++ L G + +L++EM G+ D Y +I+
Sbjct: 180 LSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALIS 239
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+ + ++AV + +E G P+ +Y+ L K+E A NL ++++ R
Sbjct: 240 AFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRR 296
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 166/374 (44%), Gaps = 34/374 (9%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SYN ++ R+ D +V SDM G+ P++ T SI+MD + + G A + R+
Sbjct: 490 SYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRM 549
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVV 284
D ++ + TYNI I+G K+G+
Sbjct: 550 VD----------------------------------ENIVPSDFTYNIKINGLCKVGRTS 575
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E + +LK+ V +GF P LT++ +++G + G + A+ + M E G P+ Y +I
Sbjct: 576 EAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLI 635
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ + + D +K M + E ++ Y LI G K + + A +F E+LD G+
Sbjct: 636 NGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLS 695
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P++ S + + AA+ + K+ G L Y L+ L G+ + LDL
Sbjct: 696 PNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDL 755
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+ EM G D IY +I GLC GQLENA ++ E R P+ +Y+ L
Sbjct: 756 YSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFK 815
Query: 525 SNKLESAYNLFRKI 538
+ L+ A+ L ++
Sbjct: 816 AGNLQEAFRLHNEM 829
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 191/413 (46%), Gaps = 13/413 (3%)
Query: 131 VVGKVVNRGNLSGEAMVL---FFNWAIKHPNVAKD--VKSYNVIVKALGRRKFFDFMCNV 185
V+G V +GN+ EA+ L + ++ V VK Y K + +FFD
Sbjct: 320 VIGACVKQGNMV-EALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFD----- 373
Query: 186 LSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
M + G +P+ T +++++ + G + KA + ++++ + +N ++ +
Sbjct: 374 --KMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLK 431
Query: 246 RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
AS LF+ + N+ TYN ++S K G++ E + ++++ +G +P +++
Sbjct: 432 VESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSY 491
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ +I G R G +D A VF M + G P+ Y+ ++ Y GD + + M
Sbjct: 492 NSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVD 551
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
N P+ TY I+GL K + ++A ++ ++ +++G VP T S ++ G +
Sbjct: 552 ENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSS 611
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ Y++ + G ++ Y L+ + L + +EM+ G D Y +I
Sbjct: 612 ALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALID 671
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G C +E A + E L G P+ ++Y+ L + N +E+A NL +++
Sbjct: 672 GFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRM 724
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 177/412 (42%), Gaps = 37/412 (8%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+K N ++ AL + V M +GV+ D T+ I+M + ++ +A +
Sbjct: 209 IKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFL 268
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV-LFNVMTYNIVISGWSKLG 281
+ G+K DA + ++V+ C+ L V A L M+ K + + T+ VI K G
Sbjct: 269 EAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQG 328
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+VE R+ E+V+ G + + + L++G + ++ A+E FD M E G P+ Y
Sbjct: 329 NMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYA 388
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEP------------------------------- 370
+I G+ + Y M + N P
Sbjct: 389 VLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVAC 448
Query: 371 ---NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
N+ TY L+S L K K+++A ++++MLD+G+ P+ + S + C G A
Sbjct: 449 DIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAA 508
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM-QESGYPSDGEIYEYVIAG 486
++ G K ++ Y +L+ G ++ M E+ PSD Y I G
Sbjct: 509 SVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDF-TYNIKING 567
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
LC +G+ A ++++ + KGF P L Y+ + + + + SA +R++
Sbjct: 568 LCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREM 619
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 113/256 (44%), Gaps = 36/256 (14%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ + +M + GV+P++ T + +++ F + A++M +
Sbjct: 595 TYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEM 654
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ GL+ D + ++ C++ + AS LF+ + G + N + YN +ISG+ L +
Sbjct: 655 RNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNM 714
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG----------- 332
+ K ++ EG S D T++ LI+GL + GR+ A++++ M KG
Sbjct: 715 EAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVL 774
Query: 333 ----CG--------------------PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
CG P+ YNA+I+ + G+ E + + M
Sbjct: 775 INGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGL 834
Query: 369 EPNMDTYTRLISGLLK 384
PN TY LI+G +K
Sbjct: 835 TPNDTTYDILINGKIK 850
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 112/270 (41%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
++ YN +++ + K ++ + +V P +FL+ L + I +A EV+
Sbjct: 173 DIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVY 232
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ M KG D + ++ + + +E K++ S + + Y+ +I K+
Sbjct: 233 EKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKN 292
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
V A + ++M D+G VPS GT TS + G A+ + + G ++++
Sbjct: 293 LDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVA 352
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L++ K L+ + +M E+G + Y +I C G + A + +
Sbjct: 353 TTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKN 412
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
K CP+ + + L L E A LF
Sbjct: 413 KNICPTVFIVNSLIRGFLKVESREEASKLF 442
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/232 (18%), Positives = 109/232 (46%), Gaps = 20/232 (8%)
Query: 122 NVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDF 181
N N DL+L + ++ N+G + D+ +Y ++ +++ +
Sbjct: 641 NNNTDLALKMRNEMRNKG-------------------LELDIAAYGALIDGFCKKQDIET 681
Query: 182 MCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLW 241
+ S++ G++P+ + ++ + + A+ + R+ G+ D ++ ++
Sbjct: 682 ASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLID 741
Query: 242 CLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
L + + A L++ M K ++ +++ Y ++I+G GQ+ +++L E+ + +P
Sbjct: 742 GLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITP 801
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+ ++ LI G +AG + +A + + M +KG P+ Y+ +I+ I G+
Sbjct: 802 NVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGN 853
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 88/442 (19%), Positives = 150/442 (33%), Gaps = 117/442 (26%)
Query: 167 NVIVKA-LGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
N++V +G K FDF + D+ + +++S+I+A ++ AI RL
Sbjct: 155 NILVDHFIGSTKRFDF-------------DSDIRIYNYLLNSYIKANKLNDAIGCFNRL- 200
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE 285
ES ++V W + N +++ K + E
Sbjct: 201 -------VES-DIVPW-------------------------IKFLNFLLTALVKNDMIYE 227
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
V +++V +G D T ++ + ++A + F K +G D AY+ VI
Sbjct: 228 AREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQ 287
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTY------------------------------ 375
+ D + K M P+ T+
Sbjct: 288 AFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQM 347
Query: 376 -----TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
T L+ G K K+ ALE F++M + G P+ T +E C G A +Y
Sbjct: 348 NVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLY 407
Query: 431 KKARK---------------------------------VGCKLS-LTAYKLLLRRLSGFG 456
+ + V C ++ + Y LL L G
Sbjct: 408 TQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEG 467
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K LW +M + G Y +I G C G L+ A V + L G P+ + YS
Sbjct: 468 KMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYS 527
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
L + + E A+ +F ++
Sbjct: 528 ILMDGYFKNGDTEYAFYVFDRM 549
>gi|297599556|ref|NP_001047351.2| Os02g0601600 [Oryza sativa Japonica Group]
gi|255671066|dbj|BAF09265.2| Os02g0601600 [Oryza sativa Japonica Group]
Length = 466
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 171/365 (46%), Gaps = 4/365 (1%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FF WA + + N +V LG+ + D M +LSDM G+ +ET++ +
Sbjct: 68 FFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQMWELLSDMHGRGL-VTVETVAKSIRRL 126
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM 268
A + + + +LED GL+ + E++NV+L LC+ + A +F + + +
Sbjct: 127 AGARRWKDVVLLFDKLEDMGLERNTETMNVLLDVLCKERKIEVAREVFAVLSPHIPPDAY 186
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
T+NI + GW + ++ E ++E+ GF P +T++ ++E + EV D+M
Sbjct: 187 TFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVLDSM 246
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+GC P+ Y ++++ F+E + M S C+P+ Y LI+ L KS +
Sbjct: 247 GSQGCHPNVITYTMIMTSLAKCERFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHL 306
Query: 389 ADALEVFE-EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+A +VF EM G+ + T + + C YG A+ + K+ CK + +Y+
Sbjct: 307 FEASQVFRVEMPMNGVSHNLATYNTMISIFCYYGRDDDALNVLKEMEAQSCKPDIQSYRP 366
Query: 448 LLRR-LSGFGKCGMLLDLWHEM-QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
LLR LS G+ + L E+ + D + Y +I GLC +G A + +E +
Sbjct: 367 LLRLFLSRRGQADTVRHLLSELTSKHNLGLDLDTYTLLIHGLCRVGDTVWAYQLFDEMVS 426
Query: 506 KGFCP 510
P
Sbjct: 427 SEIAP 431
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 66/142 (46%), Gaps = 2/142 (1%)
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
R++ L K R++ E+ +M RG+V + T+ + L ++++ K +
Sbjct: 87 RMVDLLGKMRQIDQMWELLSDMHGRGLV-TVETVAKSIRRLAGARRWKDVVLLFDKLEDM 145
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G + + +LL L K + +++ + P D + + G C+I +++ A
Sbjct: 146 GLERNTETMNVLLDVLCKERKIEVAREVFAVLSPH-IPPDAYTFNIFVHGWCSIRRIDEA 204
Query: 497 VLVMEESLRKGFCPSRLVYSKL 518
+ +EE R+GF PS + Y+ +
Sbjct: 205 MWTIEEMKRRGFPPSVITYTTV 226
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 182/399 (45%), Gaps = 36/399 (9%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++N+++K L + + L+ MA +G+ PD+ T + ++ + +AG + KA ++ +
Sbjct: 382 THNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEM 441
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
GLK D +LN VL+ LC+ A L S + + + ++Y V++ + K
Sbjct: 442 VRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNS 501
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
R+ E++ + +P T++ LI+GL R GR+ +AI+ + + EKG PD YN +
Sbjct: 502 EPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNII 561
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I Y GD + +++ M + +P++ T L++GL + K+ AL++FE +++G
Sbjct: 562 IHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGK 621
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
T + ++ +C G A+ + G + Y ++L LS G+ +
Sbjct: 622 KVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQN 681
Query: 464 LWHEMQESGY---------------------------------PSD--GEIYEYVIAGLC 488
+ H++ ESG P D E Y ++ GLC
Sbjct: 682 MLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLC 741
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
GQ + A +++E ++KG Y L L+ K
Sbjct: 742 TSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQK 780
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 183/451 (40%), Gaps = 74/451 (16%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMC--NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
V +++ N ++ AL R + + ++P+ T ++++ + G +
Sbjct: 163 VRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLAD 222
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVIS 275
A+ L ++ FGL DA + N +L C++ +G A +L MK V TYN ++S
Sbjct: 223 ALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVS 282
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID---------------- 319
+++LG + + +V++ + A GF PD T++ L GL +AG++D
Sbjct: 283 AYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLL 342
Query: 320 --------------------DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
DA+ + + M+EKG +N VI G+ + +
Sbjct: 343 PDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGC 402
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
M+ P++ TY LI K+ +A A + +EM+ RG+ T T+ + L LC
Sbjct: 403 LNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCK 462
Query: 420 -----------YGPPH------------------------AAMMMYKKARKVGCKLSLTA 444
PP A+ ++ + + S++
Sbjct: 463 EKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSIST 522
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y L++ LS G+ +D +E+ E G D Y +I C G LENA + +
Sbjct: 523 YNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMV 582
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
F P + + L N L + KL+ A LF
Sbjct: 583 ENSFKPDVVTCNTLMNGLCLNGKLDKALKLF 613
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 195/472 (41%), Gaps = 48/472 (10%)
Query: 113 KGVIEDALWNVNV----DLSLDVV--GKVVN---RGNLSGEAMVLFFNWAIKHPNVAKDV 163
KG + DAL ++ LS D V ++N R + GEA L +K VA
Sbjct: 217 KGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLAR--MKKDGVAPTR 274
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA------ 217
+YN +V A R + V+ M G PDL T +++ +AG+V +A
Sbjct: 275 PTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDE 334
Query: 218 ------------------------------IQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
+++L + + G+K + N+V+ LC+
Sbjct: 335 MERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDG 394
Query: 248 HVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
+ A N M L +V+TYN +I K G + + ++ E+V G D+ T +
Sbjct: 395 ELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLN 454
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
++ L + R ++A + + ++G PD +Y V++ Y + + ++ + M
Sbjct: 455 TVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEK 514
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
P++ TY LI GL + ++ +A++ E++++G+VP T + C G A
Sbjct: 515 KLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENA 574
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ K + K + L+ L GK L L+ E G D Y +I
Sbjct: 575 FQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQT 634
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+C G ++ A+ + +G P Y+ + + L + + E A N+ K+
Sbjct: 635 MCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKL 686
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 175/371 (47%), Gaps = 1/371 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y+VI++A R F VL D+ G D+ ++V+++ G V +A+ +L L
Sbjct: 160 YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLP 219
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVV 284
FG + D S N VL LC G L M + N++T+N +IS + G
Sbjct: 220 SFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFE 279
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ VL ++V G +PD ++ +I+G+ + G ++ A E+ + M G P+ YN ++
Sbjct: 280 RVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLL 339
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
S ++E + M +C + T+ L+ ++ V +E+ E+ML+RG +
Sbjct: 340 KGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCM 399
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P T T+ + C G A+M+ K GCK + +Y ++L+ L + DL
Sbjct: 400 PDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDL 459
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+M + G P + + +I LC G +E A+ ++++ L G P + YS + + L
Sbjct: 460 MSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK 519
Query: 525 SNKLESAYNLF 535
+ K + A L
Sbjct: 520 AGKTDEALELL 530
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 205/468 (43%), Gaps = 45/468 (9%)
Query: 107 LQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSY 166
L+ L +G D + N N+ V+ + ++G++ EA+ L + + DV SY
Sbjct: 180 LEDLHARGCALD-VGNCNL-----VLNAICDQGSVD-EALHLLRD--LPSFGCEPDVVSY 230
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
N ++K L K + + ++ +M + P++ T + ++ R G + ++L ++ +
Sbjct: 231 NAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVE 290
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVE 285
G D ++ +C+ H+ A + N M L NV+ YN ++ G + E
Sbjct: 291 HGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEE 350
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
E +L E+ + D +TF+ L++ + G +D IE+ + M E+GC PD Y VI+
Sbjct: 351 TEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVIN 410
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+ G DE + K M++ C+PN +YT ++ GL + + DA ++ +M+ +G
Sbjct: 411 GFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPL 470
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
+ T + + LC G A+ + K+ GC L +Y ++ L GK L+L
Sbjct: 471 NPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELL 530
Query: 466 HEM-----------------------------------QESGYPSDGEIYEYVIAGLCNI 490
+ M Q++ SD +Y VI+ LC
Sbjct: 531 NVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKR 590
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G+ E A+ + + G P+ Y+ L L + ++ A + ++
Sbjct: 591 GETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTEL 638
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 144/333 (43%), Gaps = 6/333 (1%)
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLF 265
+ RAGQ+ A ++ + + +A + V+ LC R + A ++ + M +G
Sbjct: 100 YCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPI 156
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
M Y++++ + G RVL+++ A G + D + ++ + G +D+A+ +
Sbjct: 157 PPM-YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLL 215
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ GC PD +YNAV+ + + + M C PN+ T+ LIS L ++
Sbjct: 216 RDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRN 275
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
EV +M++ G P + ++ +C G A + + G K ++ Y
Sbjct: 276 GLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCY 335
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
LL+ L + +L EM + P D + ++ C G ++ + ++E+ L
Sbjct: 336 NTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLE 395
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+G P + Y+ + N ++ A L + +
Sbjct: 396 RGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 428
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 117/269 (43%), Gaps = 3/269 (1%)
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
YN +++G+ + GQ +E + A P++ T+ ++ L GRI DA+ V D M
Sbjct: 93 YNAMVAGYCRAGQ---LESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
+GC P Y+ ++ G F ++ + + + C ++ +++ + V
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
+AL + ++ G P + + L+ LC + ++ ++ C ++ + L+
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
L G + ++ +M E G D +Y +I G+C G LE A ++ G
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ + Y+ L L ++ + E L ++
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEM 358
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 204/443 (46%), Gaps = 74/443 (16%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
++ Q LK K V + +N+ +D SL +V N+ G+ L NV+ DV
Sbjct: 87 MYKQMLKAKFVPDHTTFNILID-SLAKADQVEEACNVFGDMFKL---------NVSPDVY 136
Query: 165 SYNVIVKALGR-------RKFFDFM----------------------------CNVLSDM 189
+Y +++++LG K F+ M C++ M
Sbjct: 137 TYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQM 196
Query: 190 AKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHV 249
++G+ PD T +I++D+F + GQ+ +A +G+ F + + N +L L ++ +
Sbjct: 197 VQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFT---NEVTYNSLLSSLGRKGDI 253
Query: 250 GAASSLFNSMKGKVLF-NVMTYNIVIS--GWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
LF MK K L N +TY I+I GW+ G+V ++ ++ E+V D +T +
Sbjct: 254 QGLMELFGQMKAKGLVSNELTYAILIERLGWA--GRVEDVWQLYLEMVDNDIKYDIVTIN 311
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
+++ L +AGR++ A E+F MK KG DT YN +I+ G D M
Sbjct: 312 NVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEEN 371
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
C PN+ TY LIS K ++ A +F EM +RG+ P+ + +S +E G AA
Sbjct: 372 GCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAA 431
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ ++++ + GC + Y LL+ L G+ G ++ EM+++G
Sbjct: 432 ISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAG-------------- 477
Query: 487 LCNIGQLENAVLV------MEES 503
C +G++ ++LV MEE+
Sbjct: 478 -CQMGKVTKSLLVRIPPQYMEEA 499
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 174/381 (45%), Gaps = 4/381 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D ++N+++ +L + + CNV DM K V+PD+ T +I++ S G++ +++
Sbjct: 99 DHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLF 158
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
+ G + + + + V+ V A +F M K L + +TYNI+I + K
Sbjct: 159 ESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKT 218
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
GQ +ER + + +T++ L+ LGR G I +E+F MK KG + Y
Sbjct: 219 GQ---LERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTY 275
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+I G ++ + Y M + + ++ T ++ L K+ +V A E+F++M
Sbjct: 276 AILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKF 335
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G+ T T + L G AA + + + GC ++ Y L+ +
Sbjct: 336 KGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSA 395
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L+ EM+E G + Y +I G G+ + A+ + E +G P+ + Y+ L +
Sbjct: 396 ATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLID 455
Query: 521 KLLASNKLESAYNLFRKIKIA 541
L+ + + +A R+++ A
Sbjct: 456 CLIRAGRFGAAMEYLREMRDA 476
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 133/271 (49%), Gaps = 3/271 (1%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TY+ +I + K G V + K+++ F PD TF+ LI+ L +A ++++A VF M
Sbjct: 67 TYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDM 126
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ PD Y +I + ++G D MK ++ M++ C+PN+ TY ++ + +V
Sbjct: 127 FKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRV 186
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A ++F++M+ +G+ P T ++ G A K+R +++ Y L
Sbjct: 187 DEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVT---YNSL 243
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L L G L++L+ +M+ G S+ Y +I L G++E+ + E +
Sbjct: 244 LSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDI 303
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + + + L + ++E+A+ LF+ +K
Sbjct: 304 KYDIVTINNVLDCLSKAGRVEAAFELFQDMK 334
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 114/255 (44%), Gaps = 3/255 (1%)
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+++R+++ + + D+ F+ LI G A ++ A++ ++G P Y+++I
Sbjct: 13 DVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMI 72
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
++ GD + YK M P+ T+ LI L K+ +V +A VF +M +
Sbjct: 73 QVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVS 132
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P T T + L + G A M +++ GC+ +L Y ++ G+ D+
Sbjct: 133 PDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDI 192
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+ +M + G D Y +I GQLE A + +S + F + + Y+ L + L
Sbjct: 193 FQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKS--RSFT-NEVTYNSLLSSLGR 249
Query: 525 SNKLESAYNLFRKIK 539
++ LF ++K
Sbjct: 250 KGDIQGLMELFGQMK 264
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 127/285 (44%), Gaps = 10/285 (3%)
Query: 255 LFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA---EGFSPDSLTFSFLIE 310
L SM K + + +N +I + G+ ME+ L+ + A EG P + T+S +I+
Sbjct: 17 LVESMQKDRTKLDTQLFNTLIHIY---GEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQ 73
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
+ G + + + ++ M + PD +N +I + +E + M N P
Sbjct: 74 VFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSP 133
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
++ TYT LI L ++ +++FE M +G P+ T S + S G A ++
Sbjct: 134 DVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIF 193
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
++ + G + Y +L + FGK G L + + +S ++ Y +++ L
Sbjct: 194 QQMVQKGLQPDAVTYNIL---IDAFGKTGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRK 250
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
G ++ + + + KG + L Y+ L +L + ++E + L+
Sbjct: 251 GDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLY 295
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 98/226 (43%)
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
LG A R DD + ++M++ DT +N +I Y ++ ++ + P
Sbjct: 5 LGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPT 64
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
TY+ +I +K V + L ++++ML VP T ++ L A ++
Sbjct: 65 AYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFG 124
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
K+ + Y +L+R L G+ ++ L+ M G + Y V+ + G
Sbjct: 125 DMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAG 184
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
+++ A + ++ ++KG P + Y+ L + + +LE A++ K
Sbjct: 185 RVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGK 230
>gi|125540181|gb|EAY86576.1| hypothetical protein OsI_07956 [Oryza sativa Indica Group]
gi|125582780|gb|EAZ23711.1| hypothetical protein OsJ_07414 [Oryza sativa Japonica Group]
gi|215768726|dbj|BAH00955.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 500
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 171/365 (46%), Gaps = 4/365 (1%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FF WA + + N +V LG+ + D M +LSDM G+ +ET++ +
Sbjct: 102 FFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQMWELLSDMHGRGL-VTVETVAKSIRRL 160
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM 268
A + + + +LED GL+ + E++NV+L LC+ + A +F + + +
Sbjct: 161 AGARRWKDVVLLFDKLEDMGLERNTETMNVLLDVLCKERKIEVAREVFAVLSPHIPPDAY 220
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
T+NI + GW + ++ E ++E+ GF P +T++ ++E + EV D+M
Sbjct: 221 TFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVLDSM 280
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+GC P+ Y ++++ F+E + M S C+P+ Y LI+ L KS +
Sbjct: 281 GSQGCHPNVITYTMIMTSLAKCERFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHL 340
Query: 389 ADALEVFE-EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+A +VF EM G+ + T + + C YG A+ + K+ CK + +Y+
Sbjct: 341 FEASQVFRVEMPMNGVSHNLATYNTMISIFCYYGRDDDALNVLKEMEAQSCKPDIQSYRP 400
Query: 448 LLRR-LSGFGKCGMLLDLWHEM-QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
LLR LS G+ + L E+ + D + Y +I GLC +G A + +E +
Sbjct: 401 LLRLFLSRRGQADTVRHLLSELTSKHNLGLDLDTYTLLIHGLCRVGDTVWAYQLFDEMVS 460
Query: 506 KGFCP 510
P
Sbjct: 461 SEIAP 465
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 66/142 (46%), Gaps = 2/142 (1%)
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
R++ L K R++ E+ +M RG+V + T+ + L ++++ K +
Sbjct: 121 RMVDLLGKMRQIDQMWELLSDMHGRGLV-TVETVAKSIRRLAGARRWKDVVLLFDKLEDM 179
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G + + +LL L K + +++ + P D + + G C+I +++ A
Sbjct: 180 GLERNTETMNVLLDVLCKERKIEVAREVFAVLSPH-IPPDAYTFNIFVHGWCSIRRIDEA 238
Query: 497 VLVMEESLRKGFCPSRLVYSKL 518
+ +EE R+GF PS + Y+ +
Sbjct: 239 MWTIEEMKRRGFPPSVITYTTV 260
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 166/366 (45%), Gaps = 1/366 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K ++ + ++N ++K L + + NVL +M G PD T SI+ D + +
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
A+ + D G+K +A + +++L LC+ + A + K L N + YN
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNT 394
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G+ + G +V ++ + +G PD L ++ LI G +++A + + MK KG
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P YN +I Y +FD+C K M PN+ +Y LI+ L K K+ +A
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
V +M DRG+ P ++ CS G A K+ K G +L+L Y L+ L
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
S GK DL E+ G D Y +I+G G ++ + + EE R G P+
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTL 634
Query: 513 LVYSKL 518
Y L
Sbjct: 635 KTYHLL 640
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 208/492 (42%), Gaps = 23/492 (4%)
Query: 32 SNLSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRID---S 88
S +++N LL K D +VLKE+ DL + +F ++ SN
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVY 342
Query: 89 SRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVV----------NR 138
AVD + + L L +G IE A + +++ +V V +
Sbjct: 343 ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRK 402
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
G+L G M + A++ + D +YN +++ + ++ M +GV+P +
Sbjct: 403 GDLVGARMKI---EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSV 459
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
ET +I++ + R + K +L +ED G + S ++ CLC+ + A +
Sbjct: 460 ETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRD 519
Query: 259 MKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
M+ + V V YN++I G G++ + R KE++ +G + +T++ LI+GL G+
Sbjct: 520 MEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGK 579
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
+ +A ++ + KG PD YN++IS Y G+ C+ Y+ M +P + TY
Sbjct: 580 LSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHL 639
Query: 378 LISGLLKSRKVADALEVFEEML-DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
LIS K + +E+ E + + + P L +G A + K+ +
Sbjct: 640 LISLCTK-----EGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEK 694
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
L T Y L+ GK + L EM + + Y ++ G C + +A
Sbjct: 695 SIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSA 754
Query: 497 VLVMEESLRKGF 508
+ E KGF
Sbjct: 755 YVWYREMQEKGF 766
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 162/393 (41%), Gaps = 35/393 (8%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
LF +++ P++ D SY ++ L K ++ + EG+ P ++L++++D
Sbjct: 95 LFSAFSLSSPSLKHDF-SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDH 153
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNV 267
++ Q I + + + + + + VG LFN MK ++
Sbjct: 154 LVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIY-- 211
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
P ++ LI+GL + R++DA ++FD
Sbjct: 212 --------------------------------PSVFIYNVLIDGLCKGKRMNDAEQLFDE 239
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M + P YN +I Y G+ ++ K + M + + EP++ T+ L+ GL K+
Sbjct: 240 MLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGM 299
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
V DA V +EM D G VP T + + S AA+ +Y+ A G K++ +
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
LL L GK ++ G + IY +I G C G L A + +E ++G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
P L Y+ L + ++E+A K+K+
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 157/382 (41%), Gaps = 69/382 (18%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K V+ V++YN+++ GR+ FD ++L +M G P++ + +++ + +
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
+ +A + +ED G+ N+++ C + + A M K + N++TYN
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G S G++ E E +L EI +G PD T++ LI G G AG + I +++ MK G
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 333 --------------CG-----------------PDTNAYNAVISNYISVGDFDECMKYYK 361
C PD YN V+ Y GD ++ K
Sbjct: 630 IKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQK 689
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M + + TY LI G LK K+ + + +EM R + P T ++ C
Sbjct: 690 QMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCE-- 747
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH-EMQESGYPSDGEIY 480
K ++AY +W+ EMQE G+ D I
Sbjct: 748 ----------------VKDYMSAY------------------VWYREMQEKGFLLDVCIG 773
Query: 481 EYVIAGLCNIGQLENAVLVMEE 502
+++GL + + A +V+ E
Sbjct: 774 NELVSGLKEEWRSKEAEIVISE 795
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 112/237 (47%), Gaps = 3/237 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ L ++L +++++G+ PD+ T + ++ + AG V + I + +
Sbjct: 566 TYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEM 625
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVV 284
+ G+K ++ ++ L LC + + LF M K +++ YN V+ ++ G +
Sbjct: 626 KRSGIKPTLKTYHL-LISLCTKEGIELTERLFGEMSLKP--DLLVYNGVLHCYAVHGDME 682
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ + K+++ + D T++ LI G + G++ + + D M + P+ + YN ++
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+ V D+ +Y+ M ++ L+SGL + + +A V EM R
Sbjct: 743 KGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGR 799
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 176/374 (47%), Gaps = 2/374 (0%)
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
N+++ +L R F C + K GV+PD+ + +++F + G+V +AI++ ++E+
Sbjct: 222 NILLTSLVRATEFQKCCEAFHVVCK-GVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEE 280
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVE 285
G+ + + N V+ L A M + V ++TY+I++ G +K ++ +
Sbjct: 281 AGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGD 340
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
VLKE+ +GF P+ + ++ LI+ L AG ++ AIE+ D M KG ++ YN +I
Sbjct: 341 AYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 400
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
Y G D + K M S N ++T +I L AL EML R + P
Sbjct: 401 GYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSP 460
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
G +T+ + LC +G A+ ++ K G + LL L GK +
Sbjct: 461 GGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQ 520
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
E+ G+ D Y +I+G C +L+ A + M+E ++KG P YS L LL
Sbjct: 521 KEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNM 580
Query: 526 NKLESAYNLFRKIK 539
NK+E A + K
Sbjct: 581 NKVEEAIQFWGDCK 594
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 164/357 (45%), Gaps = 7/357 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S+ ++ L FD + +M ++P L+ ++ + G+ KA+++ +
Sbjct: 429 SFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKF 488
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
+ G D ++ N +L LC+ + + + G+ + + ++YN +ISG ++
Sbjct: 489 LNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKL 548
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E + E+V +G PD+ T+S LI GL ++++AI+ + K G PD Y+ +
Sbjct: 549 DEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVM 608
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I +E K + M S N +PN Y LI +S +++ ALE+ E+M +GI
Sbjct: 609 IDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGI 668
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P++ T TS ++ + A ++ ++ R G + ++ Y L + G+GK G ++
Sbjct: 669 SPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTAL---IDGYGKLGQMVK 725
Query: 464 ---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L EM + Y +I G G + A ++ E KG P + Y +
Sbjct: 726 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKE 782
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 125/254 (49%), Gaps = 1/254 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D SYN ++ K D + +M K+G+ PD T SI++ + +V +AIQ
Sbjct: 531 DRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFW 590
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
G + G+ D + +V++ C+ LF+ M L N + YN +I + +
Sbjct: 591 GDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRS 650
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ + +++ +G SP+S T++ LI+G+ R+++A + + M+ +G P+ Y
Sbjct: 651 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHY 710
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
A+I Y +G + + M S N PN TYT +I G + V +A + EM +
Sbjct: 711 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMRE 770
Query: 401 RGIVPSTGTITSFL 414
+GIVP + T F+
Sbjct: 771 KGIVPDSITYKEFI 784
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 167/403 (41%), Gaps = 3/403 (0%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
+G EA+ LF ++ V +V +YN ++ LG +D M + GV P
Sbjct: 264 KGGKVEEAIELF--SKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPT 321
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
L T SI++ +A ++ A +L + + G + N ++ L + + A + +
Sbjct: 322 LITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKD 381
Query: 258 SMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
M K L TYN +I G+ K GQ ER+LKE+++ GF+ + +F+ +I L
Sbjct: 382 LMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHH 441
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
D A+ M + P +IS G + ++ + + + T
Sbjct: 442 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSN 501
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
L+ GL ++ K+ + + +E+L RG V + + + C A M + K
Sbjct: 502 ALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKK 561
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G K Y +L+R L K + W + + +G D Y +I G C + E
Sbjct: 562 GLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEG 621
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ +E + P+ +VY+ L S +L A L +K
Sbjct: 622 QKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMK 664
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 156/367 (42%), Gaps = 36/367 (9%)
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
+ + F R G Y A+ + L + G+ + N++L L + F+ +
Sbjct: 187 IEVYCTQFKRDG-CYLALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVC 245
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
V +V + I+ + K G+V E + ++ G P+ +T++ +I+GLG +GR D+
Sbjct: 246 KGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDE 305
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A + M E+G P Y+ ++ + K M+ PN+ Y LI
Sbjct: 306 AFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLID 365
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
L+++ + A+E+ + M+ +G+ ++ T + ++ C G A + K+ +G +
Sbjct: 366 SLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNV 425
Query: 441 SLTAY---------------------KLLLRRLS--------------GFGKCGMLLDLW 465
+ ++ ++LLR +S GK ++LW
Sbjct: 426 NQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELW 485
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
+ G+ D + ++ GLC G+LE + +E L +GF R+ Y+ L + +
Sbjct: 486 LKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGN 545
Query: 526 NKLESAY 532
KL+ A+
Sbjct: 546 KKLDEAF 552
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 113/226 (50%), Gaps = 4/226 (1%)
Query: 155 KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV 214
K + DV +Y+V++ + + + + +M + P+ + ++ ++ R+G++
Sbjct: 594 KRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRL 653
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIV 273
A+++ ++ G+ ++ + ++ + V A L M+ + L NV Y +
Sbjct: 654 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTAL 713
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
I G+ KLGQ+V++E +L+E+ ++ P+ +T++ +I G R G + +A + M+EKG
Sbjct: 714 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGI 773
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
PD+ Y I Y+ G ++ +KG N ++ + +LI
Sbjct: 774 VPDSITYKEFIYGYLKQGGV---LQAFKGSDEENYAAIIEGWNKLI 816
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 2/260 (0%)
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
GN + +F + +K + D +Y+++++ L + D + G+ PD+
Sbjct: 544 GNKKLDEAFMFMDEMVKK-GLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDV 602
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
T S+++D +A + + ++ + L+ + N ++ C+ + A L
Sbjct: 603 YTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELRED 662
Query: 259 MKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
MK K + N TY +I G S + +V E + +L+E+ EG P+ ++ LI+G G+ G+
Sbjct: 663 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQ 722
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
+ + M K P+ Y +I Y G+ E + M P+ TY
Sbjct: 723 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKE 782
Query: 378 LISGLLKSRKVADALEVFEE 397
I G LK V A + +E
Sbjct: 783 FIYGYLKQGGVLQAFKGSDE 802
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 180/381 (47%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV + +++ +L DF + L+ + K G PD T + ++ G++ +A+
Sbjct: 76 IPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEAL 135
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+ ++ G + + + ++ LC+ V A ++F+ M K + N++TYN +I G
Sbjct: 136 HLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGL 195
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
KL + + ++ E+V PD T + +++ L + G + +A +V D M +G P+
Sbjct: 196 CKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNV 255
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YNA++ + + D +K + M +C N+ +Y LI+G K + V A+ +FEE
Sbjct: 256 VTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEE 315
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M + + P+T T + + LC G A+ ++ + G L Y+ L L
Sbjct: 316 MSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRH 375
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+ L ++ S + D +IY ++ G+C G+LE+A + KG P+ Y+
Sbjct: 376 LDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNI 435
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ + L L A LF ++
Sbjct: 436 MIHGLCKQGLLAEASKLFSEM 456
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 190/441 (43%), Gaps = 30/441 (6%)
Query: 89 SRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVN-VDLSLDVVGKVVNRGNLSGEAMV 147
SR +D F +P + + ++ ++L ++N VD + + K++ G+
Sbjct: 68 SRQMDSFGIPPD---------VYTLAIVINSLCHLNRVDFAFSALAKILKLGH------- 111
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
D ++ +++ L ++ M EG P++ T +++
Sbjct: 112 ------------QPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLING 159
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFN 266
+ QV +A + + G+ + + N ++ LC+ ++L N M K++ +
Sbjct: 160 LCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPD 219
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V T N V+ K G V E V+ ++ G P+ +T++ L++G +D A++VFD
Sbjct: 220 VFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFD 279
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
TM K C + +YN +I+ Y + D+ M ++ MS PN TY LI GL
Sbjct: 280 TMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVG 339
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
++ DA+ +F EM+ RG +P T + + LC AM + K + Y
Sbjct: 340 RLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYT 399
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
+L + G+ DL+ + G + Y +I GLC G L A + E +
Sbjct: 400 TILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKN 459
Query: 507 GFCPSRLVYSKLSNKLLASNK 527
G P+ Y+ ++ L +N+
Sbjct: 460 GCSPNDCTYNLITRGFLRNNE 480
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 163/364 (44%), Gaps = 23/364 (6%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H + + ++ ++ + K + + ++ + M G+ PD+ TL+I+++SF ++
Sbjct: 574 HMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLG 633
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF--NSM-------------- 259
A +L +L G + D + ++ LC+ + G + +F NS+
Sbjct: 634 YAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVT 693
Query: 260 -------KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
K++ NV+ ++ V+ K G + V+ ++ G PD +T++ L++G
Sbjct: 694 TLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGH 753
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
+D+A++VFDTM KGC P+ +YN +I+ Y + D+ M + MS +
Sbjct: 754 CLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADT 813
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
TY LI GL ++ A+ +F EM+ G +P T L+ LC AM++ K
Sbjct: 814 VTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKA 873
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+ Y + + + G+ DL+ + G D Y +I GLC G
Sbjct: 874 IEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGL 933
Query: 493 LENA 496
L+ A
Sbjct: 934 LDEA 937
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 179/356 (50%), Gaps = 12/356 (3%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ ++ +YN ++ L + + + ++++M + PD+ TL+ V+D+ + G V +A
Sbjct: 181 ISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAH 240
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ + G++ + + N ++ C R V A +F++M K + NV++YN +I+G+
Sbjct: 241 DVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGY 300
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K+ V + + +E+ + +P+++T++ LI GL GR+ DAI +F M +G PD
Sbjct: 301 CKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDL 360
Query: 338 NAYNAVISNYISVG-DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y +S+Y+ D+ M K + N +P++ YT ++ G+ ++ ++ DA ++F
Sbjct: 361 VTYRT-LSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFS 419
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+ +G+ P+ T + LC G A ++ + K GC + Y L+ R
Sbjct: 420 NLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNN 479
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PS 511
+ ++L EM G+ D ++ L + G +++S+++ C PS
Sbjct: 480 EALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG--------LDQSVKQILCKPS 527
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 167/400 (41%), Gaps = 36/400 (9%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
N EA+ F K P +N ++ ++ + K + ++ M G+ PD+
Sbjct: 24 NTLDEALSTFNRMLHKQP--PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVY 81
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
TL+IV++S +V A L ++ G + DA
Sbjct: 82 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDAT------------------------- 116
Query: 260 KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
T+ +I G G++ E + +++ EGF P+ +T+ LI GL + ++
Sbjct: 117 ---------TFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVT 167
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
+A +F M KG P+ YN++I + ++ M P++ T ++
Sbjct: 168 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 227
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
L K VA+A +V + M+ RG+ P+ T + ++ C A+ ++ C
Sbjct: 228 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 287
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
++ +Y L+ + L+ EM + Y +I GLC++G+L++A+ +
Sbjct: 288 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISL 347
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
E + +G P + Y LS+ L + L+ A L + I+
Sbjct: 348 FHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIE 387
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 170/446 (38%), Gaps = 82/446 (18%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV + N +V AL + +V+ M GV P++ T + +MD +V A+
Sbjct: 216 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 275
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
++ + + S N ++ C+ V A LF M + L N +TYN +I G
Sbjct: 276 KVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 335
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTF-------------------------------- 305
+G++ + + E+VA G PD +T+
Sbjct: 336 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDI 395
Query: 306 ---SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+ +++G+ RAG ++DA ++F + KG P+ YN +I G E K +
Sbjct: 396 QIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSE 455
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT----------- 411
M+ C PN TY + G L++ + +E+ EEML RG T T
Sbjct: 456 MNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGL 515
Query: 412 --SFLEPLC--------------SYGP--------------PH-----AAMMMYKKARKV 436
S + LC S P PH A+ + + +
Sbjct: 516 DQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHM 575
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
S + LL ++ +L L +M G P D +I C++ +L A
Sbjct: 576 HPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYA 635
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKL 522
V+ + L+ GF P + Y L N L
Sbjct: 636 FSVLAKLLKLGFQPDVVTYGTLMNGL 661
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 126/274 (45%), Gaps = 13/274 (4%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V T NI+I+ + L ++ VL +++ GF PD +T+ L+ GL +
Sbjct: 615 DVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK----------- 663
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
M KG PD YN++I ++ ++ M + PN+ ++ ++ L K
Sbjct: 664 --MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKE 721
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+A A +V + M+ RG+ P T T+ ++ C A+ ++ GC ++ +Y
Sbjct: 722 GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 781
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+L+ + + L +M G +D Y +I GLC++G+L++A+ + E +
Sbjct: 782 NILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 841
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G P + Y L + L ++ L A L + I+
Sbjct: 842 SGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIE 875
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/421 (19%), Positives = 171/421 (40%), Gaps = 60/421 (14%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y + L + + D +L + +PD++ + ++D RAG++ A +
Sbjct: 359 DLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLF 418
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
L GL+ + + N+++ LC++ + AS LF+ M K N TYN++ G+ +
Sbjct: 419 SNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRN 478
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLI-----EGLGRAGR------------------ 317
+ + +L+E++A GFS D T + L+ +GL ++ +
Sbjct: 479 NEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMR 538
Query: 318 -----------------------IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
+DDA+ F+ M P T + ++++ + +
Sbjct: 539 SLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYS 598
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ M S+ P++ T LI+ R++ A V ++L G P T + +
Sbjct: 599 TVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLM 658
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
LC M+ K G + Y L+ L + + L +EM S
Sbjct: 659 NGLCK--------MITK-----GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIM 705
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
+ ++ V+ LC G + A V++ +++G P + Y+ L + ++++ A +
Sbjct: 706 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKV 765
Query: 535 F 535
F
Sbjct: 766 F 766
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 115/246 (46%), Gaps = 1/246 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +V ++ +V AL + +V+ M K GV PD+ T + +MD ++ +A+
Sbjct: 704 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV 763
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
++ + G + S N+++ CQ + A L M + L + +TYN +I G
Sbjct: 764 KVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL 823
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+G++ + E+VA G PD +T+ L++ L + + +A+ + ++ D
Sbjct: 824 CHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADI 883
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN I G+ + + +SS +P++ TY +I GL K + +A ++F +
Sbjct: 884 LVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRK 943
Query: 398 MLDRGI 403
M + I
Sbjct: 944 MDENDI 949
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 81/186 (43%)
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
++++N S + DE + + M P+ + RL++ + K++ + L +
Sbjct: 10 SSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSR 69
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+M GI P T+ + LC A K K+G + T + L+R L G
Sbjct: 70 QMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEG 129
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K G L L+ +M G+ + Y +I GLC Q+ A + E + KG P+ + Y+
Sbjct: 130 KIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYN 189
Query: 517 KLSNKL 522
L + L
Sbjct: 190 SLIHGL 195
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 185/397 (46%), Gaps = 8/397 (2%)
Query: 149 FFNWAIKH---PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
F+N I N+ + S+N+++KAL R D V M+ D T S +M
Sbjct: 158 FYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLM 217
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKV 263
G++ +A+ +L ++ G + + NV++ LC++ + AS L ++M KG V
Sbjct: 218 HGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCV 277
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
N +TYN ++ G G++ + +L +VA P+ +TF L++G + GR D +
Sbjct: 278 P-NEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVR 336
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
V +++EKG + +Y+++IS G + M+ +K M C+PN Y+ LI GL
Sbjct: 337 VLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLC 396
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
+ K +A E EM ++G P++ T +S + G H A++++K+ C
Sbjct: 397 REGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEV 456
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
Y +L+ L GK L +W +M G D Y +I G CN +E + + +
Sbjct: 457 CYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQM 516
Query: 504 L--RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
L P + Y+ L N N + A ++ +
Sbjct: 517 LCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTM 553
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 198/421 (47%), Gaps = 6/421 (1%)
Query: 123 VNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFD-- 180
V ++ S ++ K + +L +A+ LF + + + VKS+N ++ + + FD
Sbjct: 97 VFIEKSFIIMFKAYGKAHLPQKALDLFHRMGAEF-HCKQTVKSFNTVLNVVIQEGCFDLA 155
Query: 181 --FMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNV 238
F +V+ + + P+ + ++V+ + R G V +A+++ + D D + +
Sbjct: 156 LEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYST 215
Query: 239 VLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
++ LC + A SL + M+ + F N + +N++IS K G + +++ + +G
Sbjct: 216 LMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKG 275
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
P+ +T++ L+ GL G++D A+ + + M C P+ + ++ ++ G + +
Sbjct: 276 CVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGV 335
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+ + N +Y+ LISGL K K +++++EM+++G P+T ++ ++ L
Sbjct: 336 RVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGL 395
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
C G P A + + G + Y L+ G + +W EM ++
Sbjct: 396 CREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHE 455
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
Y +I GLC G+L+ A++V ++ L +G + YS + + + +E LF +
Sbjct: 456 VCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQ 515
Query: 538 I 538
+
Sbjct: 516 M 516
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 144/343 (41%), Gaps = 41/343 (11%)
Query: 203 IVMDSFIRAGQVYKAIQMLGRL-EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
I+ ++ +A KA+ + R+ +F K +S N VL + Q A +N +
Sbjct: 105 IMFKAYGKAHLPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVID 164
Query: 262 KVLF-----NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
F N +++N+VI ++G V + V + + D T+S L+ GL G
Sbjct: 165 SNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEG 224
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
RID+A+ + D M+ +G P+ A+N +IS GD K M C PN TY
Sbjct: 225 RIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYN 284
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
L+ GL K+ A+ + M+ VP+ T + ++ +G
Sbjct: 285 SLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHG--------------- 329
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
R L G + + ++E GY + Y +I+GL G+ E+
Sbjct: 330 -------------RALDG-------VRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHG 369
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + +E + KG P+ +VYS L + L K + A ++K
Sbjct: 370 MQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMK 412
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 111/259 (42%), Gaps = 23/259 (8%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y+ ++ L R D L +M +G P+ T S +M + AG ++KAI + +
Sbjct: 388 YSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMT 447
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
D ++++ LC+ + A ++ M + + +V+ Y+ +I G+ V
Sbjct: 448 DNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVE 507
Query: 285 EMERVLKEIVAEG--FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ ++ +++ PD +T++ L+ + AI++ +TM ++GC P
Sbjct: 508 QGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDP------- 560
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDT---YTRLISGLLKSRKVADALEVFEEML 399
DF C + K + N +P D L+ L+K ++ A + E ML
Sbjct: 561 ---------DFITCDIFLKTLRD-NMDPPQDGREFLDELVVRLIKRQRTVGASNIIEVML 610
Query: 400 DRGIVPSTGTITSFLEPLC 418
+ ++P T ++ LC
Sbjct: 611 QKFLLPKPSTWALAVQQLC 629
>gi|47848296|dbj|BAD22160.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 454
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 171/365 (46%), Gaps = 4/365 (1%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FF WA + + N +V LG+ + D M +LSDM G+ +ET++ +
Sbjct: 56 FFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQMWELLSDMHGRGL-VTVETVAKSIRRL 114
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM 268
A + + + +LED GL+ + E++NV+L LC+ + A +F + + +
Sbjct: 115 AGARRWKDVVLLFDKLEDMGLERNTETMNVLLDVLCKERKIEVAREVFAVLSPHIPPDAY 174
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
T+NI + GW + ++ E ++E+ GF P +T++ ++E + EV D+M
Sbjct: 175 TFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVLDSM 234
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+GC P+ Y ++++ F+E + M S C+P+ Y LI+ L KS +
Sbjct: 235 GSQGCHPNVITYTMIMTSLAKCERFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHL 294
Query: 389 ADALEVFE-EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+A +VF EM G+ + T + + C YG A+ + K+ CK + +Y+
Sbjct: 295 FEASQVFRVEMPMNGVSHNLATYNTMISIFCYYGRDDDALNVLKEMEAQSCKPDIQSYRP 354
Query: 448 LLRR-LSGFGKCGMLLDLWHEM-QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
LLR LS G+ + L E+ + D + Y +I GLC +G A + +E +
Sbjct: 355 LLRLFLSRRGQADTVRHLLSELTSKHNLGLDLDTYTLLIHGLCRVGDTVWAYQLFDEMVS 414
Query: 506 KGFCP 510
P
Sbjct: 415 SEIAP 419
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 68/159 (42%), Gaps = 2/159 (1%)
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
R++ L K R++ E+ +M RG+V + T+ + L ++++ K +
Sbjct: 75 RMVDLLGKMRQIDQMWELLSDMHGRGLV-TVETVAKSIRRLAGARRWKDVVLLFDKLEDM 133
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G + + +LL L K + +++ + P D + + G C+I +++ A
Sbjct: 134 GLERNTETMNVLLDVLCKERKIEVAREVFAVLSPH-IPPDAYTFNIFVHGWCSIRRIDEA 192
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ +EE R+GF PS + Y+ + Y +
Sbjct: 193 MWTIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVL 231
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 189/407 (46%), Gaps = 20/407 (4%)
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVK---ALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+LFF+ ++ P ++D+ V + A R ++L+ + G+ T I
Sbjct: 85 LLFFHALLRLPERSRDLSPCTVDLALDLAARLRHPRQLTSSILALFPRHGLAFTPRTFPI 144
Query: 204 VMDSFI----RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
+ + F R + L R G+ D N +L L + H G A+SL ++
Sbjct: 145 MFERFAVSHRRPDHAVRFFLSLHR--SHGVAQDLPLFNSLLDALVKSRHAGKAASLVRAL 202
Query: 260 KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
+ + + +TYN + GW ++ +L+++V G +P T++ +++G R+G++
Sbjct: 203 ERRFPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQ 262
Query: 320 DAIEVFDTMKEKG-----CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
A + F MK++G C PD +Y V+ G D+ K + MS C P++ T
Sbjct: 263 HAWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIAT 322
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y LI K V DA+ VF++M+ +G +P+ T T + LC G AM + K +
Sbjct: 323 YNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMK 382
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ--ESGYPSDGEIYEYVIAGLCNIGQ 492
+ GC+ ++ Y +L+ L G L L+ M E P+ + Y +I+ + +
Sbjct: 383 REGCEPNVQTYNVLIGYLFEEGDIEKALHLFETMSKGEECLPNQ-DTYNIIISAMFVRKR 441
Query: 493 LEN---AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
E+ A ++ E + +G+ P R +++++ N L+ + E + L R
Sbjct: 442 AEDMAVAARMVVEMVDRGYLPRRFMFNRVLNGLMLTGNQELSRELLR 488
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 107/250 (42%), Gaps = 10/250 (4%)
Query: 297 GFSPDSLTFSFLIEGLGRAGR-IDDAIEVFDTM-KEKGCGPDTNAYNAVISNYISVGDFD 354
F+P TF + E + R D A+ F ++ + G D +N+++ +
Sbjct: 136 AFTPR--TFPIMFERFAVSHRRPDHAVRFFLSLHRSHGVAQDLPLFNSLLDALVKSRHAG 193
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ + + P+ TY L G + + + AL++ +M++ GI P+ T L
Sbjct: 194 KAASLVRALER-RFPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIIL 252
Query: 415 EPLCSYGPPHAAMMMYKKARKVG-----CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
+ G A + + +K G CK + +Y +L L G+ ++ EM
Sbjct: 253 KGFFRSGQLQHAWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMS 312
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
G Y +I C G +E+AV V ++ +RKG+ P+ + Y+ L L + K++
Sbjct: 313 REGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKID 372
Query: 530 SAYNLFRKIK 539
A L K+K
Sbjct: 373 RAMKLLDKMK 382
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 48/124 (38%), Gaps = 1/124 (0%)
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
P HA R G L + LL L G L + E +P D Y
Sbjct: 156 PDHAVRFFLSLHRSHGVAQDLPLFNSLLDALVKSRHAGKAASLVRAL-ERRFPPDAVTYN 214
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
+ G C + A+ ++ + + G P++ Y+ + S +L+ A++ F ++K
Sbjct: 215 TLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKR 274
Query: 542 RQND 545
ND
Sbjct: 275 GSND 278
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 185/385 (48%), Gaps = 1/385 (0%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H + + ++ ++ + K + + ++ + M G+ PD+ TL+I+++SF ++
Sbjct: 143 HMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLG 202
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVI 274
A +L +L G + D + N ++ LC +G A LF+ G+ +V+TY ++
Sbjct: 203 YAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLM 262
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G K+G R+L+ +V + P+ + ++ +I+ L + ++ +A +F M KG
Sbjct: 263 NGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGIS 322
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN++I ++ ++ M + PN+ ++ ++ L K +A A +V
Sbjct: 323 PDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDV 382
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ M+ RG+ P T T+ ++ C A+ ++ GC ++ +Y +L+
Sbjct: 383 VDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQ 442
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+ + L +M G +D Y +I GLC++G+L++A+ + E + G P +
Sbjct: 443 IQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVT 502
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
Y L + L ++ L A L + I+
Sbjct: 503 YRILLDYLCKNHHLAEAMVLLKAIE 527
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 176/397 (44%), Gaps = 3/397 (0%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
GEA+ LF + I DV +Y ++ L + +L M ++ P++ +
Sbjct: 237 GEALHLF-DKTIGE-GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYN 294
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KG 261
++DS + QV +A + + G+ D + N ++ LC ++L N M
Sbjct: 295 TIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS 354
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
K++ NV+ ++ V+ K G + V+ ++ G PD +T++ L++G +D+A
Sbjct: 355 KIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEA 414
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
++VFDTM KGC P+ +YN +I+ Y + D+ M + MS + TY LI G
Sbjct: 415 VKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHG 474
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L ++ A+ +F EM+ G +P T L+ LC AM++ K
Sbjct: 475 LCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDAD 534
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ Y + + + G+ DL+ + G D Y +I GLC G L+ A +
Sbjct: 535 ILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFR 594
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ G +Y+ + L SN+ A L +++
Sbjct: 595 KMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEM 631
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 127/275 (46%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V T NI+I+ + L ++ VL +++ G PD+ TF+ LI GL G+I +A+ +F
Sbjct: 184 DVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLF 243
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D +G PD Y +++ VG+ ++ + M NC PN+ Y +I L K
Sbjct: 244 DKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKD 303
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
R+V +A +F EM+ +GI P T S + LC+ + + ++ +
Sbjct: 304 RQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF 363
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
++ L G + D+ M + G D Y ++ G C +++ AV V + +
Sbjct: 364 STVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 423
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
KG P+ Y+ L N +++ A L ++ +
Sbjct: 424 KGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSL 458
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 3/265 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V DV +Y ++ R D V M +G P++ + +I+++ + + ++ KA+
Sbjct: 391 VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAM 450
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
+L ++ GL D + N ++ LC + A +LF+ M G++ +++TY I++
Sbjct: 451 GLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIP-DLVTYRILLDY 509
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K + E +LK I D L ++ I+G+ RAG ++ A ++F + KG PD
Sbjct: 510 LCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 569
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN +I G DE K ++ M C + Y +I G L+S + A ++ +
Sbjct: 570 VRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQ 629
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYG 421
EML G T T +E L G
Sbjct: 630 EMLAEGFSADVSTTTLIVEMLSDDG 654
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 85/186 (45%)
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
D+ + + M + P+ +T+L++ + K + + L + +M GI P T+
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
+ C A + K K+GC+ T + L+R L GK G L L+ + G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
+ D Y ++ GLC +G A+ ++ ++K P+ + Y+ + + L ++ A+
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310
Query: 533 NLFRKI 538
NLF ++
Sbjct: 311 NLFSEM 316
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 100/252 (39%), Gaps = 35/252 (13%)
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY----------- 366
+DDA+ F+ M P T + ++++ + + + M S+
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190
Query: 367 ------------------------NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
C+P+ T+ LI GL K+ +AL +F++ + G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P T + + LC G AA+ + + + C+ ++ AY ++ L +
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+L+ EM G D Y +I LCN+ + ++ ++ E + P+ +V+S + + L
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370
Query: 523 LASNKLESAYNL 534
+ A+++
Sbjct: 371 CKEGMIAIAHDV 382
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 90/195 (46%), Gaps = 42/195 (21%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
EAMVL AI+ N+ D+ YN+ + + R + ++ S+++ +G+ PD+ T +
Sbjct: 517 AEAMVLL--KAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYN 574
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK 262
I++ + G + +A ++ ++++ G D C+
Sbjct: 575 IMIHGLCKRGLLDEANKLFRKMDENGCSRDG--------CI------------------- 607
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
YN +I G+ + + ++L+E++AEGFS D T + ++E L DD +
Sbjct: 608 -------YNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLS-----DDGL 655
Query: 323 -EVFDTMKEKGCGPD 336
+ F+ ++ +G G +
Sbjct: 656 DQSFERLRLRGVGEE 670
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 193/378 (51%), Gaps = 2/378 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +YN I+ LG++ +M K+ P+L T ++++D +AG+V A ++
Sbjct: 373 VIAYNCILTCLGKKGRLGEALRTFEEMKKDAA-PNLSTYNVLIDMLCKAGEVEAAFKVRD 431
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLG 281
+++ GL + ++N+++ LC+ + A S+F M K+ + +T+ +I G K G
Sbjct: 432 AMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQG 491
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+V + R+ ++++ P+++ ++ LI+ + GR +D ++F M +GC PD N
Sbjct: 492 RVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLN 551
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A + G+ + ++ + S P++ +Y+ LI GL+K+ + E+F M ++
Sbjct: 552 AYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQ 611
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G V T +F++ C G + A + ++ + G + ++ Y ++ L+ +
Sbjct: 612 GCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEA 671
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+ E + +G + IY +I G +G+++ A L+MEE ++KG P+ ++ L +
Sbjct: 672 YMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 731
Query: 522 LLASNKLESAYNLFRKIK 539
L+ + ++ A F+ +K
Sbjct: 732 LVKAEEINEALVCFQNMK 749
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 178/391 (45%), Gaps = 1/391 (0%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FF+ H + DV +Y ++ L + D + M + P + ++ +
Sbjct: 290 FFHEIKSHGLLPDDV-TYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGY 348
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM 268
AG+ +A +L R + G + N +L CL ++ +G A F MK N+
Sbjct: 349 GSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLS 408
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TYN++I K G+V +V + G P+ +T + +I+ L +A ++D+A +F+ M
Sbjct: 409 TYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGM 468
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
K C PD + ++I G D+ + Y+ M + PN YT LI K +
Sbjct: 469 NHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRK 528
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
D ++F+EM+ RG P + ++++ + G ++++ + G + +Y +L
Sbjct: 529 EDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSIL 588
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L G +L++ M+E G D Y I G C G++ A ++EE KG
Sbjct: 589 IHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGR 648
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P+ + Y + + L ++L+ AY LF + K
Sbjct: 649 QPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 679
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 197/434 (45%), Gaps = 11/434 (2%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
F ++K G++ D D++ + V+ +GN EA V F ++ NV +
Sbjct: 290 FFHEIKSHGLLPD-------DVTYTSMIGVLCKGNRLDEA-VEIFEQMEQNRNVPC-AYA 340
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN ++ G FD ++L G P + + ++ + G++ +A++ ++
Sbjct: 341 YNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMK 400
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVV 284
+ + NV++ LC+ V AA + ++MK LF NVMT NI+I K ++
Sbjct: 401 KDAAP-NLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLD 459
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E + + + + SPD +TF LI+GLG+ GR+DDA +++ M + P+ Y ++I
Sbjct: 460 EACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLI 519
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
++ G ++ K +K M C P++ + + K+ + +FEE+ RG +
Sbjct: 520 KSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFI 579
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P + + + L G ++ ++ GC L AY + GK L
Sbjct: 580 PDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQL 639
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
EM+ G Y VI GL I +L+ A ++ EE+ G + ++YS L +
Sbjct: 640 LEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGK 699
Query: 525 SNKLESAYNLFRKI 538
+++ AY + ++
Sbjct: 700 VGRIDEAYLIMEEL 713
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/469 (21%), Positives = 203/469 (43%), Gaps = 47/469 (10%)
Query: 115 VIEDALWNVNVDLSL---------DVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
++E W +V+ +L D+V V+ R +A + +F W + + A ++
Sbjct: 72 ILESGNWGPDVENALSLFVESPKTDLVIGVLRRAKDVNQA-ISYFRWTERKTDQALCPEA 130
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG--- 222
Y+ ++ + + FD+ +L +M+ G P +T ++ S I++ ++ + ++
Sbjct: 131 YDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMR 190
Query: 223 --------------------------------RLEDFGLKFDAESLNVVLWCLCQRLHVG 250
++++ G + V+ + +
Sbjct: 191 KFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLD 250
Query: 251 AASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
AA SL + MK L +++ YN+ I + K G+V + EI + G PD +T++ +I
Sbjct: 251 AALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMI 310
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
L + R+D+A+E+F+ M++ P AYN +I Y S G FDE + + C
Sbjct: 311 GVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCI 370
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P++ Y +++ L K ++ +AL FEEM + P+ T ++ LC G AA +
Sbjct: 371 PSVIAYNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFKV 429
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
++ G ++ +++ RL K ++ M D + +I GL
Sbjct: 430 RDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGK 489
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G++++A + E+ L P+ +VY+ L + E + +F+++
Sbjct: 490 QGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEM 538
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 182/432 (42%), Gaps = 36/432 (8%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
A+K + +V + N+++ L + K D C++ M + +PD T ++D + G
Sbjct: 432 AMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQG 491
Query: 213 QVYKAI----QML---------------------GRLED----------FGLKFDAESLN 237
+V A QML GR ED G D LN
Sbjct: 492 RVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLN 551
Query: 238 VVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAE 296
+ C+ + G +LF +K + + +VM+Y+I+I G K G E + + +
Sbjct: 552 AYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQ 611
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
G D+ ++ I+G ++G+++ A ++ + MK KG P Y +VI + DE
Sbjct: 612 GCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEA 671
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
++ S E N+ Y+ LI G K ++ +A + EE++ +G+ P+ T L+
Sbjct: 672 YMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 731
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
L + A++ ++ + + + Y +L+ L K W EMQ+ G +
Sbjct: 732 LVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPN 791
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
Y +IAGL G + A + E G P Y+ + L S + AY +F
Sbjct: 792 TITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFE 851
Query: 537 KIKIARQNDYAR 548
+ ++ N + +
Sbjct: 852 ETRMKGCNIHTK 863
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 138/318 (43%), Gaps = 38/318 (11%)
Query: 136 VNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
V + +G+ LF IK DV SY++++ L + F + M ++G
Sbjct: 557 VFKAGETGKGRALF--EEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCV 614
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
D + +D F ++G+V KA Q+L ++ G + + V+ L + + A L
Sbjct: 615 LDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYML 674
Query: 256 FNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD------------- 301
F K L NV+ Y+ +I G+ K+G++ E +++E++ +G +P+
Sbjct: 675 FEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVK 734
Query: 302 ----------------------SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
+T+S LI GL R + + A + M+++G P+T
Sbjct: 735 AEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTIT 794
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y +I+ G+ E ++ + P+ +Y +I GL SR+ +A ++FEE
Sbjct: 795 YTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETR 854
Query: 400 DRGIVPSTGTITSFLEPL 417
+G T T + L+ L
Sbjct: 855 MKGCNIHTKTCIALLDAL 872
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 83/217 (38%)
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
++ M G GP T +I + I E + M + P YT LI L
Sbjct: 149 QILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGAL 208
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
++ L +F +M + G S T+ + G AA+ + + + +
Sbjct: 209 SSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADI 268
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y + + GK M +HE++ G D Y +I LC +L+ AV + E+
Sbjct: 269 VLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQ 328
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ P Y+ + ++ K + AY+L + K
Sbjct: 329 MEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQK 365
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 117/280 (41%), Gaps = 16/280 (5%)
Query: 277 WSKLGQVVEM-ERVLKEIVAEGFSPD----------SLTFSFLIEGLGRAGRIDDAIEVF 325
W+K G E+ + V K + + + PD S +I L RA ++ AI F
Sbjct: 56 WTKSGTAKEVVDDVCKILESGNWGPDVENALSLFVESPKTDLVIGVLRRAKDVNQAISYF 115
Query: 326 ---DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+ ++ P+ AY++++ FD + MS P+ T LI
Sbjct: 116 RWTERKTDQALCPE--AYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSC 173
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+KS K+ + ++ + M P+ T+ + L S + ++ + +++G ++S+
Sbjct: 174 IKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSV 233
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
+ ++R + G+ L L EM+ + +D +Y I G+++ A E
Sbjct: 234 HLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHE 293
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
G P + Y+ + L N+L+ A +F +++ R
Sbjct: 294 IKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNR 333
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 176/379 (46%), Gaps = 1/379 (0%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A +++ NV++ L + F+ + + +M G++P + T ++D R G + +A +
Sbjct: 144 ALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQE 203
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWS 278
M + G+ +++ LC + A S+ +M+ ++ NV TYN ++ G+
Sbjct: 204 MFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYC 263
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
KL + R+ ++++ EG PD +TF LI+GL + G + A +F M + P+
Sbjct: 264 KLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIA 323
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
YN++I Y VGD E M + + + P++ TY+ LI GL + +A +FE+M
Sbjct: 324 VYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKM 383
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
GI+ ++ T S ++ C G A+ + + + G + ++ + L+
Sbjct: 384 TKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNL 443
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+ ++ EM D Y +I G C G ++ A+ + + L G P+ S L
Sbjct: 444 QAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCL 503
Query: 519 SNKLLASNKLESAYNLFRK 537
+ L K+ A LF +
Sbjct: 504 LDGLCKDGKISDALELFTE 522
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 170/371 (45%), Gaps = 14/371 (3%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ V Y ++++ L + ++ M + GV P++ T + +MD + + +A+
Sbjct: 213 IVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQAL 272
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF-NSMKGKVLFNVMTYNIVISGW 277
++ + GL D + +++ LC+ + AA +LF N +K V N+ YN +I +
Sbjct: 273 RLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAY 332
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K+G V E + E+ SPD T+S LI GL R ++A +F+ M ++G ++
Sbjct: 333 CKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANS 392
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN++I G D+ ++ M+ EPN+ T++ LI G K R + A+ ++ E
Sbjct: 393 VTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSE 452
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ + + P T T+ ++ C YG A+ +Y G + LL L GK
Sbjct: 453 MVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGK 512
Query: 458 CGMLLDLWHEMQESGYP-------------SDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
L+L+ E E P ++ Y +I GLC GQ AV + +
Sbjct: 513 ISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMR 572
Query: 505 RKGFCPSRLVY 515
R G P ++Y
Sbjct: 573 RYGLQPDEVIY 583
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 146/308 (47%), Gaps = 14/308 (4%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV ++ +++ L + N+ +M K V P++ + ++D++ + G V +A+
Sbjct: 283 LVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAM 342
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+ LE F + D + ++++ LC A ++F M K +L N +TYN +I G
Sbjct: 343 ALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGC 402
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G++ + + ++ G P+ +TFS LI+G + + A+ ++ M K PD
Sbjct: 403 CKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDV 462
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y A+I + G E +K Y M PN T + L+ GL K K++DALE+F E
Sbjct: 463 VTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTE 522
Query: 398 MLD----RGIVPSTGT---------ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
++ R V + G+ T+ + LC G A+ ++ R+ G +
Sbjct: 523 KIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVI 582
Query: 445 YKLLLRRL 452
Y ++LR L
Sbjct: 583 YVVMLRGL 590
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 179/431 (41%), Gaps = 63/431 (14%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FFN A + K+++ Y+ I+ L K +L+D+ + +
Sbjct: 49 FFNAAPE-----KNIQLYSAIIHVLVGSKLLSHARYLLNDLVQ---------------NL 88
Query: 209 IRAGQVYKAIQM----LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL 264
+++ + Y A Q+ L RL+ KF ++ LC+ V A S+++ +
Sbjct: 89 VKSHKPYHACQLAFSELSRLKSS--KFTPNVYGELIIVLCKMELVEEALSMYHKVGAA-- 144
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+ N+++ K G+ + R+ +E+++ G SP +TF LI+G R G + A E+
Sbjct: 145 LTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEM 204
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
FD M+ KG P Y +I S +E ++ M PN+ TY L+ G K
Sbjct: 205 FDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCK 264
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA---------------MMM 429
AL ++++ML G+VP T ++ LC +G AA + +
Sbjct: 265 LANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAV 324
Query: 430 YKKARKVGCKLS--------------------LTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
Y CK+ + Y +L+R L + +++ +M
Sbjct: 325 YNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMT 384
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
+ G ++ Y +I G C G+++ A+ + + G P+ + +S L + L+
Sbjct: 385 KEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQ 444
Query: 530 SAYNLFRKIKI 540
+A ++ ++ I
Sbjct: 445 AAMGIYSEMVI 455
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 159/321 (49%), Gaps = 26/321 (8%)
Query: 103 RGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKD 162
R +F+ +K A++N +D V G++S EAM LF ++ V+ D
Sbjct: 307 RNLFVNMIKFSVTPNIAVYNSLIDAYCKV-------GDVS-EAMALFLE--LERFEVSPD 356
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +Y+++++ L + N+ M KEG+ + T + ++D + G++ KA+++
Sbjct: 357 VFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICS 416
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLG 281
++ + G++ + + + ++ C+ ++ AA +++ M K L +V+TY +I G K G
Sbjct: 417 QMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYG 476
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE---KGCGPD-- 336
+ E ++ +++ G +P+ T S L++GL + G+I DA+E+F E C D
Sbjct: 477 SMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAG 536
Query: 337 ------TN--AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
TN AY A+I G F + +K + M Y +P+ Y ++ GL + + +
Sbjct: 537 GSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI 596
Query: 389 ADALEVFEEMLDRGIVPSTGT 409
L +ML G++P++
Sbjct: 597 LMMLHA--DMLKFGVIPNSAV 615
>gi|449437378|ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
gi|449503560|ref|XP_004162063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
Length = 615
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 186/429 (43%), Gaps = 17/429 (3%)
Query: 108 QKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYN 167
+ ++ +EDAL + S ++ V + + S + + F WA K +N
Sbjct: 99 RSVRPGAALEDALDRTGIVPSSSLLEAVFDHFDSSPKFLHSLFLWAAKKSGFRPSAALFN 158
Query: 168 VIVKALGRRKFFDFMCNVLSDMAKEGVNP---DLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++ L + + FD ++++ + G +E I++ + RAG V AI R
Sbjct: 159 RLINVLAKSREFDSAWSLITSRLRGGEESFLVSVEVFVILIRRYARAGMVQPAI----RT 214
Query: 225 EDFGLKFDAES-------LNVVLWCLCQRLHVGAASSLFN---SMKGKVLFNVMTYNIVI 274
+F + S ++L LC+ HV AS FN M ++ YNI+I
Sbjct: 215 YEFACNLETISGTGSEGLFEILLDSLCKEGHVRVASEYFNRKREMGSSFEPSIRAYNILI 274
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+GW + ++ +R+ E+ SP +T+ LIEG R ++ AIE+ D M+ +G
Sbjct: 275 NGWFRSRKLKHAQRLWFEMKKNKISPTVVTYGTLIEGYCRMRSVEIAIELVDEMRREGIE 334
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ YN ++ G F E + + P + TY L+ G K+ ++ A ++
Sbjct: 335 PNAIVYNPIVDALGEAGRFKEALGMMERFMVLEQGPTISTYNSLVKGYCKAGDLSGASKI 394
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ M+ RG P+ T F YG +M +Y K + G Y LLL+ L
Sbjct: 395 LKMMIGRGFTPTPTTYNYFFRFFSKYGKIEESMSLYNKMIESGYAPDKLTYHLLLKMLCE 454
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+ + + + +EM+ G+ D ++ LC + + E A E + +G P L
Sbjct: 455 EERLNLAVQVCNEMKARGFDMDLATSTMLMHLLCKMHKFEEAFAEFEHMIHRGIVPQYLT 514
Query: 515 YSKLSNKLL 523
+ +L ++ +
Sbjct: 515 FCRLHDEFM 523
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 163/413 (39%), Gaps = 39/413 (9%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSD------------MAKEGVNPDLETL 201
I +PN A DVK +A + ++LSD + + G+ P L
Sbjct: 69 ISNPNSAIDVK-----FEASYSPNDLSTISSILSDRSVRPGAALEDALDRTGIVPSSSLL 123
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS-MK 260
V D F + + ++ L + G + A N ++ L + +A SL S ++
Sbjct: 124 EAVFDHFDSSPKFLHSL-FLWAAKKSGFRPSAALFNRLINVLAKSREFDSAWSLITSRLR 182
Query: 261 G---KVLFNVMTYNIVISGWSKLGQVVEMERV------LKEIVAEGFSPDSLTFSFLIEG 311
G L +V + I+I +++ G V R L+ I G F L++
Sbjct: 183 GGEESFLVSVEVFVILIRRYARAGMVQPAIRTYEFACNLETISGTG---SEGLFEILLDS 239
Query: 312 LGRAGRIDDAIEVFDTMKEKGCG--PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
L + G + A E F+ +E G P AYN +I+ + + + M
Sbjct: 240 LCKEGHVRVASEYFNRKREMGSSFEPSIRAYNILINGWFRSRKLKHAQRLWFEMKKNKIS 299
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P + TY LI G + R V A+E+ +EM GI P+ ++ L G A+ M
Sbjct: 300 PTVVTYGTLIEGYCRMRSVEIAIELVDEMRREGIEPNAIVYNPIVDALGEAGRFKEALGM 359
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL---DLWHEMQESGYPSDGEIYEYVIAG 486
++ + +++ Y L++ G+ K G L + M G+ Y Y
Sbjct: 360 MERFMVLEQGPTISTYNSLVK---GYCKAGDLSGASKILKMMIGRGFTPTPTTYNYFFRF 416
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G++E ++ + + + G+ P +L Y L L +L A + ++K
Sbjct: 417 FSKYGKIEESMSLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAVQVCNEMK 469
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 116/290 (40%), Gaps = 49/290 (16%)
Query: 298 FSPDSL-TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
+SP+ L T S ++ R+ R A+E D + G P ++ AV ++ S F
Sbjct: 84 YSPNDLSTISSILSD--RSVRPGAALE--DALDRTGIVPSSSLLEAVFDHFDSSPKFLHS 139
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA------------------LEVFEEM 398
+ + S P+ + RLI+ L KSR+ A +EVF +
Sbjct: 140 LFLWAAKKS-GFRPSAALFNRLINVLAKSREFDSAWSLITSRLRGGEESFLVSVEVFVIL 198
Query: 399 LDR----GIVP-------------------STGTITSFLEPLCSYGPPHAAMMMYKKARK 435
+ R G+V S G L+ LC G A + + R+
Sbjct: 199 IRRYARAGMVQPAIRTYEFACNLETISGTGSEGLFEILLDSLCKEGHVRVASEYFNRKRE 258
Query: 436 VGCKL--SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
+G S+ AY +L+ K LW EM+++ Y +I G C + +
Sbjct: 259 MGSSFEPSIRAYNILINGWFRSRKLKHAQRLWFEMKKNKISPTVVTYGTLIEGYCRMRSV 318
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
E A+ +++E R+G P+ +VY+ + + L + + + A + + + Q
Sbjct: 319 EIAIELVDEMRREGIEPNAIVYNPIVDALGEAGRFKEALGMMERFMVLEQ 368
>gi|356534319|ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Glycine max]
Length = 507
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 210/433 (48%), Gaps = 4/433 (0%)
Query: 115 VIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALG 174
++ L V S ++V +V+N+ + +G + FF WA K ++++ +++ALG
Sbjct: 72 TVDACLAAVPAKPSPELVLEVLNKLSNAGVLALSFFRWAEKQSEFKHTTEAFHALIEALG 131
Query: 175 RRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
+ + F + +++DM + + +T S+V + RA + +AI+ ++E +GLK
Sbjct: 132 KIRQFKMIWTLVNDMKQRKLLTS-DTFSLVARRYARARKAKEAIKTFEKMEHYGLKPHVS 190
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
N ++ LC+ V A +F+ M K ++ ++ +Y I++ GWS+ ++++ V +E+
Sbjct: 191 DFNKLVDVLCKSKSVEEAHEVFDKMRKLRLDPDIKSYTILLEGWSQQQNLIKVNEVCREM 250
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+GF D + + ++ +A + D+AI ++ MK +G P + Y +I+ S
Sbjct: 251 EDKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARGVRPSPHVYCTLINGLGSDKRL 310
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
DE +++++ + P TY ++ S ++ DA + EM GI P++ T
Sbjct: 311 DEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDAYRMVGEMKKCGIGPNSRTFDIV 370
Query: 414 LEPLCSYGPPHAAMMMYKKAR--KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
L L A ++++ + GC+ S++ Y++++R M + +W EM+
Sbjct: 371 LHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMVRMFCNEELLDMAVAVWDEMKGK 430
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G ++ ++ LC+ +L+ A +E L G P ++S L L+ + A
Sbjct: 431 GILPGMHMFSTLVCALCHESKLDEACKYFQEMLDVGIRPPAKMFSTLKEALVDAGMEHVA 490
Query: 532 YNLFRKIKIARQN 544
+ KI R++
Sbjct: 491 MHFTLKIDKLRKS 503
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 137/547 (25%), Positives = 240/547 (43%), Gaps = 47/547 (8%)
Query: 2 AFLSRFYRTRYPLSSLSSSFSLFSFSTSVRSNLSYNELLSNQKKNMSSLDEHHVLKELSD 61
A L+R R L L S +L S SVR +SYN +L+ + LD
Sbjct: 51 ARLNRLLR----LVPLPESPALLSSLPSVRDAVSYNTVLAALCRQGGCLDAALF------ 100
Query: 62 LFQISSHNSFPNVYKESRSNSVKRIDSSRAVDEF--LLPEERLRGVFLQKLKGKGVIEDA 119
L ++ +H + P S + ++ + + R + LL + + GV + +I
Sbjct: 101 LLRVMAHETRPTAV--SYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGL 158
Query: 120 LWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFF 179
+VD +++++ ++ G PNV Y+ +++ + +
Sbjct: 159 CDAADVDKAVELLREMCESG---------------IEPNVV----VYSCLLQGYCKAGRW 199
Query: 180 DFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVV 239
+ + V +M+ G+ PD+ + ++DS R G+V KA Q++ ++ + GL+ + + NV+
Sbjct: 200 ECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVL 259
Query: 240 LWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIV--AE 296
+ +C+ V A SL N+M K V + +TYN +I+G S + ++ E +L+E++
Sbjct: 260 INSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGET 319
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
P+ +TF+ +I GL + GR+ A +V D M E GC + +N +I + V +
Sbjct: 320 MVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKA 379
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
M+ M+S EP+ TY+ LI+G K +V A + +M GI P L
Sbjct: 380 MELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAA 439
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM-----LLDLWHEMQES 471
LC G A + + K CKL + AY ++ G C + + M +
Sbjct: 440 LCEQGMMEQARNFFDEMHK-NCKLDVVAYSTMIH-----GACRLRDRKSAEEFLKHMLDE 493
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G D Y +I N G L A V+++ GF P V+ L A E
Sbjct: 494 GLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKV 553
Query: 532 YNLFRKI 538
L R++
Sbjct: 554 LELIREM 560
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 148/349 (42%), Gaps = 44/349 (12%)
Query: 232 DAESLNVVLWCLC-QRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS---KLGQVVEME 287
DA S N VL LC Q + AA L M + ++Y ++ + GQ V +
Sbjct: 77 DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGL- 135
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
L+++ A G PD +T+ LI GL A +D A+E+ M E G P+ Y+ ++ Y
Sbjct: 136 --LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGY 193
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
G ++ K ++ MS EP++ YT LI L + KV A +V ++M++RG+ P+
Sbjct: 194 CKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNV 253
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF----GKCGMLLD 463
T + +C G AM + + G L Y L+ LSG G+L +
Sbjct: 254 VTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEE 313
Query: 464 LWHE---------------------------------MQESGYPSDGEIYEYVIAGLCNI 490
+ H M E+G + + +I GL +
Sbjct: 314 MIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRV 373
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+++ A+ +M+E G P YS L N +++ A +L K++
Sbjct: 374 HKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMR 422
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 133/270 (49%), Gaps = 3/270 (1%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A ++ ++N+++ L R ++ +MA G+ PD T SI+++ F + QV +A
Sbjct: 357 ACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAES 416
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSK 279
+L ++ G++ + +L LC++ + A + F+ M +V+ Y+ +I G +
Sbjct: 417 LLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACR 476
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
L E LK ++ EG PDS+T+S LI +G + A V M G PD
Sbjct: 477 LRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAV 536
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL---KSRKVADALEVFE 396
++++I Y + GD ++ ++ + M++ + + + + + L+ + + + ++ F+
Sbjct: 537 FDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLVANNEGKALLQSVPGFD 596
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
+ +G V S+ +T+ L LC+ P A
Sbjct: 597 TEVSKGAVISSHELTNMLHKLCNKVEPAVA 626
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 174/373 (46%), Gaps = 4/373 (1%)
Query: 149 FFNWAIKH-PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
F +A K+ PN + + +Y+ I+ L R + F + +LSD+ K + V+ +
Sbjct: 80 IFEYAGKYQPNFSHNYDTYDSIIHKLSRARVFGPVELLLSDLHKSQIKCGENIFINVIRN 139
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK--VLF 265
+ AG+ A++ R++DF ++ SLN +L Q ++F + + K VL
Sbjct: 140 YGLAGKPDFALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLP 199
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
NV T NI+I K V +VL E+ A G P+ +T++ ++ G G + +A +VF
Sbjct: 200 NVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVF 259
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ ++G PD Y +++ Y G + +K M EPN TY ++ K
Sbjct: 260 GELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKE 319
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+K +A + ++ML+R VPS+ ++ LC G A ++K+ K C
Sbjct: 320 KKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIM 379
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ L GK L+ E + PS Y +IAG+C G+L A + ++ +
Sbjct: 380 STLIHWLCKEGKVWEARKLFGEFERGAIPS-LLTYNTLIAGMCEKGELSEAGKLWDDMME 438
Query: 506 KGFCPSRLVYSKL 518
KG+ P+ Y+ L
Sbjct: 439 KGYKPNAFTYNML 451
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 146/302 (48%), Gaps = 2/302 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V +V + N+++KAL ++ + VL +M G+ P++ T + ++ + G + A
Sbjct: 197 VLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNAN 256
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ G L D G DA + +++ C++ + A L + M + V N +TY +++ +
Sbjct: 257 KVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAY 316
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K + E +L +++ + P S +I+ L AG+I++A E++ M +K C PD
Sbjct: 317 CKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDN 376
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+ +I G E K + G P++ TY LI+G+ + ++++A +++++
Sbjct: 377 AIMSTLIHWLCKEGKVWEARKLF-GEFERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDD 435
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+++G P+ T ++ G + + ++ C + + Y +L+ L G
Sbjct: 436 MMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGM 495
Query: 458 CG 459
G
Sbjct: 496 EG 497
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 118/274 (43%), Gaps = 1/274 (0%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N TY+ +I S+ +E +L ++ F +I G AG+ D A+ F
Sbjct: 94 NYDTYDSIIHKLSRARVFGPVELLLSDLHKSQIKCGENIFINVIRNYGLAGKPDFALRTF 153
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM-SSYNCEPNMDTYTRLISGLLK 384
+++ + N +++ ++ +D +K S Y PN+ T LI L K
Sbjct: 154 IRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCK 213
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
V A++V +EM G++P+ T T+ L S G A ++ + G T
Sbjct: 214 KNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATT 273
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y +L+ G+ + L +M E+G + Y ++ C + A ++++ L
Sbjct: 274 YTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDML 333
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ + PS + K+ + L + K+E A L++++
Sbjct: 334 ERQYVPSSALCCKVIDVLCEAGKIEEACELWKRM 367
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 183/405 (45%), Gaps = 7/405 (1%)
Query: 132 VGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAK 191
+ K R NL G+A + + + KSYNV++ L NV +M
Sbjct: 143 IMKYYGRANLPGQATRMLLDMKGVYC-CEPTFKSYNVVLDILVSANCPSVAANVFYEMLS 201
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
+GV P + T +VM + +V A +L + G ++ ++ L +R V
Sbjct: 202 KGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNE 261
Query: 252 ASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A L M L +V T+N VI G +L ++ E +++ ++ GF+P+ +T+ L+
Sbjct: 262 ALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMN 321
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY-YKGMSSYNCE 369
GL R G++D+A + K P+ + +I+ Y+ G DE + Y M C
Sbjct: 322 GLCRVGKVDEA----QVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCR 377
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P++ T+ LI GL K + A+++ +M G P+ T T+ L+ C A +
Sbjct: 378 PDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYV 437
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ G +L++ Y +LLR L GK LD+ EM + G D + +I GLC
Sbjct: 438 LNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCK 497
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
+ + E+A+ + + L G + + Y+ L + L ++ A L
Sbjct: 498 VDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKL 542
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 200/454 (44%), Gaps = 55/454 (12%)
Query: 128 SLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLS 187
S +VV ++ N A +F+ K V V ++ V++KAL D C++L
Sbjct: 175 SYNVVLDILVSANCPSVAANVFYEMLSK--GVIPTVYTFGVVMKALCMVNEVDNACSLLR 232
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ-- 245
DM K G P+ ++ + + +V +A+++L + G D ++ N V++ LC+
Sbjct: 233 DMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLN 292
Query: 246 RLHVGAASSLFNSMKGKVLF-----NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
R+H GA + ++LF N +TY ++++G ++G+V E + +L ++ +P
Sbjct: 293 RIHEGA------KLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP----TP 342
Query: 301 DSLTFSFLIEGLGRAGRIDDAIE-VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
+ + F+ LI G ++GR+D+A ++D M + GC PD +N +I G +
Sbjct: 343 NDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDM 402
Query: 360 YKGMSSYNCEPNMDTYTRLISG-----------------------------------LLK 384
MS+ C PN+ TYT L+ G L K
Sbjct: 403 VNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCK 462
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+ KV AL++ EM D+G P T + + LC A+ +Y+ G +
Sbjct: 463 NGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVT 522
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y L+ G L L ++M G P D Y +I C +G E A+ + +E +
Sbjct: 523 YNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMV 582
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
RK PS + + L N L K+ +A L R +
Sbjct: 583 RKDLVPSNISCNLLINGLCRVGKVCNALELLRDM 616
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 168/390 (43%), Gaps = 33/390 (8%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV ++N ++ L R ++ M G P+ T ++M+ R G+V +A +L
Sbjct: 277 DVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLL 336
Query: 222 ---------------------GRLEDF-----------GLKFDAESLNVVLWCLCQRLHV 249
GRL++ G + D + N ++ LC++ +
Sbjct: 337 NKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLM 396
Query: 250 GAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
G+A + N M N++TY ++ G+ K Q+ E VL E+ A+GF + + ++ L
Sbjct: 397 GSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVL 456
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
+ L + G++ A+++ M +KGC PD +N +I V ++ + Y+ M
Sbjct: 457 LRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGV 516
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
N TY LI L+ + +AL++ +ML RG T ++ C G A+
Sbjct: 517 IANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALG 576
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++ + + S + LL+ L GK L+L +M G D Y +I GLC
Sbjct: 577 LFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLC 636
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+G + A + + +G P + Y+ L
Sbjct: 637 KMGNIREAFNLFNKLQAEGIQPDAITYNTL 666
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 188/452 (41%), Gaps = 48/452 (10%)
Query: 74 VYKESRSNSVKRIDSSRAVDEFLL----PEERLRGVFLQKLKGKGVIEDALWNVN-VDLS 128
+Y R N + + ++ VD L P + GV + L G +++A +N V
Sbjct: 285 IYGLCRLNRIH--EGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTP 342
Query: 129 LDV-----VGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMC 183
DV + V G L EA ++ IK+ DV ++N ++ L ++
Sbjct: 343 NDVHFTILINGYVKSGRLD-EANAFLYDKMIKN-GCRPDVFTFNTLIHGLCKKGLMGSAV 400
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
++++DM+ G P+L T + ++D F + Q+ +A +L + G +
Sbjct: 401 DMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFEL------------ 448
Query: 244 CQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
N+M YN+++ K G+V + +L E+ +G PD
Sbjct: 449 ----------------------NIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIF 486
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
TF+ LI GL + R +DA+ ++ M G +T YN +I ++ G E +K M
Sbjct: 487 TFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDM 546
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
C + TY LI K AL +F+EM+ + +VPS + + LC G
Sbjct: 547 LFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKV 606
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+ + + G + Y L+ L G +L++++Q G D Y +
Sbjct: 607 CNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTL 666
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
I C G ++A L++ + F P+ + +
Sbjct: 667 ICWHCRAGMFDDAYLLLLRGVENAFIPNDVTW 698
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 158/419 (37%), Gaps = 65/419 (15%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F WA Y+V++ LG K F + +L + +EG+ +M +
Sbjct: 88 IFQWAGSQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYY 147
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM 268
RA +A +ML ++ ++C F S
Sbjct: 148 GRANLPGQATRMLLDMKG-------------VYC---------CEPTFKS---------- 175
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
YN+V+ V E++++G P TF +++ L +D+A + M
Sbjct: 176 -YNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDM 234
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ GC P++ Y +I +E +K + M C P++DT+ +I GL + ++
Sbjct: 235 TKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRI 294
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM-------------------- 428
+ ++ + ML RG P+ T + LC G A +
Sbjct: 295 HEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGY 354
Query: 429 ------------MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
+Y K K GC+ + + L+ L G G +D+ ++M +G +
Sbjct: 355 VKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPN 414
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
Y ++ G C QLE A V+ E KGF + + Y+ L L + K+ A ++
Sbjct: 415 LITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDML 473
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 1/244 (0%)
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+G+ + LI+ LG A ++ +KE+G + + ++ Y +
Sbjct: 96 KGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQ 155
Query: 356 CMKYYKGMSS-YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ M Y CEP +Y ++ L+ + + A VF EML +G++P+ T +
Sbjct: 156 ATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVM 215
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
+ LC A + + K GC + Y+ L+ LS + L L EM G
Sbjct: 216 KALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCL 275
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
D + + VI GLC + ++ +++ L +GF P+ + Y L N L K++ A L
Sbjct: 276 PDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVL 335
Query: 535 FRKI 538
K+
Sbjct: 336 LNKV 339
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 1/191 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V + +YN ++ A R +++DM G D T + ++ +F + G KA+
Sbjct: 516 VIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKAL 575
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+ + L S N+++ LC+ V A L M + L +V+TYN +I+G
Sbjct: 576 GLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGL 635
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K+G + E + ++ AEG PD++T++ LI RAG DDA + E P+
Sbjct: 636 CKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPND 695
Query: 338 NAYNAVISNYI 348
+ ++SN+I
Sbjct: 696 VTWYILVSNFI 706
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 170/339 (50%), Gaps = 5/339 (1%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
PD+ T +I++++ V +A+++L + G K D + NV++ +C+ + A
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73
Query: 256 FNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
NSM NV+T+NI++ G+ ++ E++L E+V +G SP +TF+ LI L R
Sbjct: 74 LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G + AI++ + M GC P++ +YN ++ + D ++Y + M S C P++ T
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y +++ L K KV A+E+ ++ +G P T + ++ L G A+ + + R
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G K + Y L+ LS GK + +H+++ G + Y ++ GLC Q +
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313
Query: 495 NAVLVMEESLRKGFCPSRLVYSKL----SNKLLASNKLE 529
A+ + + KG P+ + Y+ L +N+ LA LE
Sbjct: 314 RAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALE 352
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 140/305 (45%), Gaps = 1/305 (0%)
Query: 232 DAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVL 290
D + +++ C VG A L + M + +V+TYN++++G K G++ E + L
Sbjct: 15 DVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFL 74
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
+ + G P+ +T + ++ + GR DA ++ M KGC P +N +I+
Sbjct: 75 NSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRK 134
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
G + + M ++ C PN +Y L+ G K +K+ A++ E M+ RG P T
Sbjct: 135 GLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTY 194
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+ L LC G AA+ + + GC L Y ++ LS GK ++L HEM+
Sbjct: 195 NTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRG 254
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G D Y +IAGL G++E A+ + G P+ Y+ + L + + +
Sbjct: 255 KGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDR 314
Query: 531 AYNLF 535
A +
Sbjct: 315 AIDFL 319
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 161/347 (46%), Gaps = 1/347 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y ++++A +L +M G PD+ T +++++ + G++ +AI+ L
Sbjct: 15 DVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFL 74
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ +G + + + N++L +C A L M K +V+T+NI+I+ +
Sbjct: 75 NSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRK 134
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + +L+++ G +P+SL+++ L+ G + ++D AI+ + M +GC PD Y
Sbjct: 135 GLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTY 194
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +++ G D ++ +SS C P + TY +I GL K K A+E+ EM
Sbjct: 195 NTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRG 254
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G+ P T +S + L G A+ + G K + Y ++ L +
Sbjct: 255 KGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDR 314
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
+D M G Y +I G+ N G + A+ ++ E +G
Sbjct: 315 AIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRG 361
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 145/273 (53%), Gaps = 5/273 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PNV ++N+I++++ + +L++M ++G +P + T +I+++ R G +
Sbjct: 83 QPNVI----THNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLG 138
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVI 274
+AI +L ++ G ++ S N +L C+ + A M + + +++TYN ++
Sbjct: 139 RAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTML 198
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+ K G+V +L ++ ++G SP +T++ +I+GL + G+ D A+E+ M+ KG
Sbjct: 199 TALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLK 258
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD Y+++I+ G +E +K++ + + +PN TY ++ GL K+++ A++
Sbjct: 259 PDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDF 318
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
M+ +G P+ + T +E + + G A+
Sbjct: 319 LAYMISKGCKPTEVSYTILIEGIANEGLAKEAL 351
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 123/289 (42%), Gaps = 36/289 (12%)
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
ME + +++ E + PD +T++ LIE + A+++ D M +GC PD YN +++
Sbjct: 1 MEVLDRQLEKECY-PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVN 59
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
G DE +K+ M SY +PN+ T+ ++ + + + DA ++ EM+ +G P
Sbjct: 60 GMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSP 119
Query: 406 STGTITSFLEPLCSYG------------PPHAA----------MMMYKKARKV------- 436
S T + LC G P H + + K +K+
Sbjct: 120 SVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYL 179
Query: 437 ------GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
GC + Y +L L GK ++L +++ G Y VI GL +
Sbjct: 180 EIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKV 239
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G+ + AV ++ E KG P + YS L L K+E A F ++
Sbjct: 240 GKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVE 288
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 208/464 (44%), Gaps = 19/464 (4%)
Query: 62 LFQISSHNSFPNV--YKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDA 119
+ ISSH P + + SR + + R D + + L + L + GK DA
Sbjct: 80 VLAISSH-PLPTLAAFLASRRDELLRADITSLLKALELSGHWEWALALLRWAGKEGAADA 138
Query: 120 LWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFF 179
+L++V + + R +A+ + P DV++Y ++ AL R +
Sbjct: 139 S-------ALEMVVRALGREG-QHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRY 190
Query: 180 DFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY-KAIQMLGRLEDFGLKFDAESLNV 238
+ + +++ ++GV P L T ++V+D + R G+ + + + +L + G++ D + +
Sbjct: 191 ERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTAST 250
Query: 239 VLWCLCQRLHVGAASSLFNSMKGKVLFN-VMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
V+ C+ V A + F +K + V+TYN ++ + K G E RVL E+ G
Sbjct: 251 VIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNG 310
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
PD++T++ L RAG ++A DTM KG P+ YN V++ Y +VG DE +
Sbjct: 311 CQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEAL 370
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+ M PN++TY ++ L K + LE+ EM G P+ T + L
Sbjct: 371 ALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVC 430
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM---LLDLWHEMQESGYP 474
G + + R G +LS Y L ++ +G+CG +++EM +G+
Sbjct: 431 GKRGMEDYVTRVLEGMRSCGVELSRDTYNTL---IAAYGRCGSRTNAFKMYNEMTSAGFT 487
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
Y ++ L G A ++ + KGF P+ YS L
Sbjct: 488 PCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLL 531
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 183/430 (42%), Gaps = 61/430 (14%)
Query: 141 LSG--EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA-KEGVNPD 197
LSG E + WA K A D + ++V+ALGR D +C +L + G D
Sbjct: 116 LSGHWEWALALLRWAGKEG--AADASALEMVVRALGREGQHDAVCALLDETPLPPGSRLD 173
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ + V+ + RAG+ +A+++ L G
Sbjct: 174 VRAYTTVLHALSRAGRYERALELFAELRRQG----------------------------- 204
Query: 258 SMKGKVLFNVMTYNIVISGWSKLGQV-VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
V ++TYN+V+ + ++G+ + +L E+ A G PD T S +I R G
Sbjct: 205 -----VAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDG 259
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
+D+A+ F+ +K +G P YNA++ + G++ E ++ M C+P+ TY
Sbjct: 260 LVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYN 319
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
L ++ +A + M +G++P+ T + + + G A+ ++ + +K
Sbjct: 320 ELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKT 379
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G ++ Y L+L L + ++L++ EM SG + + ++A +C +E+
Sbjct: 380 GFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLA-VCGKRGMEDY 438
Query: 497 VLVMEESLRK-----------------GFCPSRLVYSKLSNKLLAS--NKLESAYNLFRK 537
V + E +R G C SR K+ N++ ++ + YN
Sbjct: 439 VTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLN 498
Query: 538 IKIARQNDYA 547
+ ++RQ D++
Sbjct: 499 V-LSRQGDWS 507
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 182/453 (40%), Gaps = 38/453 (8%)
Query: 127 LSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVL 186
++ +VV V R S +V + ++ V D + + ++ A R D
Sbjct: 210 VTYNVVLDVYGRMGRSWPRIVALLD-EMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFF 268
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
D+ G P + T + ++ F +AG +A+++LG +E G + DA + N + +
Sbjct: 269 EDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARA 328
Query: 247 LHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
A+ ++M K +L N TYN V++ + +G+V E + ++ GF P+ T+
Sbjct: 329 GFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTY 388
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ ++ LG+ R +E+ M GC P+ +N +++ G D + +GM S
Sbjct: 389 NLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRS 448
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
E + DTY LI+ + +A +++ EM G P T + L L G
Sbjct: 449 CGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWST 508
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC-------------GMLLDLW------- 465
A + K R G K + +Y LLL+ + G G + W
Sbjct: 509 AQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLV 568
Query: 466 ----------------HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
E++ GY D I+ +++ G A V + R G
Sbjct: 569 IANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLS 628
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
P + Y+ L + ++ A + ++K ++
Sbjct: 629 PDLITYNSLMDMYAKCSESWEAEKILNQLKCSQ 661
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 26/246 (10%)
Query: 139 GNLSGEAMV---------LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDM 189
GN++G A + +F +W I V + K RR D M ++
Sbjct: 539 GNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKC---------RR--LDGMETAFQEV 587
Query: 190 AKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHV 249
G NPDL + ++ + + G KA ++ ++ GL D + N ++ +
Sbjct: 588 KARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSES 647
Query: 250 GAASSLFNSMKGKVLF--NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
A + N +K +V++YN VI+G+ K G V E +RVL E+VA+G +P ++T+
Sbjct: 648 WEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHT 707
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
L+ G +A EV M + G P Y V+ +Y F+E +G S
Sbjct: 708 LVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAKRFEEA----RGFLSEV 763
Query: 368 CEPNMD 373
E ++D
Sbjct: 764 SETDLD 769
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 120/293 (40%), Gaps = 40/293 (13%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ A GR + ++M G P + T + +++ R G A ++ ++
Sbjct: 457 TYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKM 516
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFN--VMTYNIVISGWSKLG 281
G K + +S +++L C + +V +++ N + G +F V+ +VI+ + K
Sbjct: 517 RTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANF-KCR 575
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG--------- 332
++ ME +E+ A G++PD + F+ ++ + G A EVFD++K G
Sbjct: 576 RLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYN 635
Query: 333 -----------------------CG----PDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
C PD +YN VI+ + G E + M +
Sbjct: 636 SLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVA 695
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
P TY L+ G ++A EV M+ G+ P T +E C
Sbjct: 696 DGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYC 748
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 136/326 (41%), Gaps = 15/326 (4%)
Query: 35 SYNELLSNQKKNMSSLDEHHVLKELSDL-FQ--ISSHNSFPNVYKESRSNSVKRIDSSRA 91
+YN L++ + S + + E++ F I+++N+ NV S + S+
Sbjct: 457 TYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKM 516
Query: 92 VDEFLLPEERLRGVFLQ------KLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSG-- 143
+ P E+ + LQ + G IE+ ++ V+ + + N
Sbjct: 517 RTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRR 576
Query: 144 -EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
+ M F +K D+ +N ++ + + V + + G++PDL T +
Sbjct: 577 LDGMETAFQ-EVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYN 635
Query: 203 IVMDSFIRAGQVYKAIQMLGRLE-DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+MD + + + ++A ++L +L+ +K D S N V+ C++ V A + + M
Sbjct: 636 SLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVA 695
Query: 262 KVLFN-VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
+ +TY+ ++ G+S L E V+ +V G P LT+ ++E RA R ++
Sbjct: 696 DGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAKRFEE 755
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISN 346
A + E D A A I +
Sbjct: 756 ARGFLSEVSETDLDFDKKALEAYIED 781
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 119/280 (42%), Gaps = 42/280 (15%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV-------- 214
+ +YN ++ L R+ + +++S M +G P+ ++ S+++ + + G V
Sbjct: 490 ITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIEN 549
Query: 215 ----------------------YKAIQMLGRLEDF------GLKFDAESLNVVLWCLCQR 246
+K ++ G F G D N +L +
Sbjct: 550 EVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKN 609
Query: 247 LHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEI-VAEGFSPDSLT 304
A+ +F+S+K L +++TYN ++ ++K + E E++L ++ ++ PD ++
Sbjct: 610 GMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVS 669
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
++ +I G + G + +A V M G P Y+ ++ Y S+ F E + M
Sbjct: 670 YNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMV 729
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADAL----EVFEEMLD 400
+ +P TY R++ ++++ +A EV E LD
Sbjct: 730 QHGLKPMELTYRRVVESYCRAKRFEEARGFLSEVSETDLD 769
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/459 (22%), Positives = 203/459 (44%), Gaps = 38/459 (8%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
++D + V+V L +V + G + A+ L +K + D+ YNV + G+
Sbjct: 202 MQDVGYEVSVPLFTTLVRALAREGQME-PALALVDE--VKGSCLEPDIVLYNVCIDCFGK 258
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG------------- 222
D ++ G+ PD + + ++ +AG++ +A ++ G
Sbjct: 259 AGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYA 318
Query: 223 ----------------------RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
RL + G S N +L CL ++ V A +LF+ MK
Sbjct: 319 YNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMK 378
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
N+ TYNI+I G+V E ++ E+ G P+ L+ + +++ L +A ++++
Sbjct: 379 KDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEE 438
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A +F++ E+GC P++ Y ++I G D+ + ++ M + N YT LI
Sbjct: 439 AHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIR 498
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
+ D ++++EM+ RG P + ++++ + G +++ + G
Sbjct: 499 NFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLP 558
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+ +Y +L+ L+ G+ +++ M + G+ D Y V+ GLC G+++ A V+
Sbjct: 559 DVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVL 618
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
EE K P+ Y + + L ++L+ AY LF + K
Sbjct: 619 EEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAK 657
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 180/384 (46%), Gaps = 15/384 (3%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEG--VNPDLETLSIVMDSFIRA-----GQVYKA 217
+Y ++ LG++ D + M G NP + T S++ + F+ ++YK
Sbjct: 457 TYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYT-SLIRNFFMHGRKEDGHKIYK- 514
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISG 276
+M+ R G + D LN + C+ + V ++F MK L +V +Y+I+I G
Sbjct: 515 -EMIRR----GGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHG 569
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+K GQ E + + + +GF+ D+ ++ +++GL ++G++D A EV + MK K P
Sbjct: 570 LTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPT 629
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y +++ + DE ++ S E N+ Y+ LI G K ++ +A + E
Sbjct: 630 VATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILE 689
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
EM+ +G+ P+ T S ++ L A++ ++ +++ C + Y +L+ L
Sbjct: 690 EMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQ 749
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K W EMQ+ G + Y +I+GL +G + +A + E G P ++
Sbjct: 750 KYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFN 809
Query: 517 KLSNKLLASNKLESAYNLFRKIKI 540
L + +N+ AY +F + ++
Sbjct: 810 ALIEGMSNANRPMEAYQVFEETRL 833
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 154/293 (52%), Gaps = 1/293 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV+SY++++ L + N+ M+++G D + V+D ++G+V KA ++L
Sbjct: 559 DVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVL 618
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++ + + ++ L + + A LF K K + NV+ Y+ +I G+ K+
Sbjct: 619 EEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKV 678
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ E +L+E++ +G +P+ T++ L++ L + ID+A+ F +MKE C P+T Y
Sbjct: 679 GRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTY 738
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +I+ V +++ +++ M PN+ TYT +ISGL K + DA +FE
Sbjct: 739 SILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKT 798
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
G +P + + + +E + + P A ++++ R GC+L++ LL L+
Sbjct: 799 NGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALN 851
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 184/378 (48%), Gaps = 2/378 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V S+N I+ LG+++ D L D+ K+ P++ T +I++D AG+V +A ++
Sbjct: 351 VVSFNSILTCLGKKRKVDEALT-LFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRD 409
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLG 281
+E GL + S+N+++ LC+ + A +F S + N +TY +I G K G
Sbjct: 410 EMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKG 469
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ + R+ ++++ G + + ++ LI GR +D +++ M +G PD N
Sbjct: 470 KIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLN 529
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+ G+ ++ ++ M S+ P++ +Y+ LI GL K+ + + +F+ M +
Sbjct: 530 TYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQ 589
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G + ++ LC G A + ++ + ++ Y ++ L+ +
Sbjct: 590 GFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEA 649
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+ E + G + +Y +I G +G+++ A L++EE ++KG P+ ++ L +
Sbjct: 650 YMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDA 709
Query: 522 LLASNKLESAYNLFRKIK 539
L+ + +++ A F+ +K
Sbjct: 710 LVKTEEIDEALICFQSMK 727
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 164/349 (46%), Gaps = 10/349 (2%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ +M + G PDL L+ MD +AG+V K + ++ FG D S ++++ L
Sbjct: 512 IYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLT 571
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ S++F +M + + YN V+ G K G+V + VL+E+ + P
Sbjct: 572 KAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVA 631
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T+ +++GL + R+D+A +F+ K KG + Y+++I + VG DE + M
Sbjct: 632 TYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEM 691
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
PN+ T+ L+ L+K+ ++ +AL F+ M + P+T T + + LC
Sbjct: 692 MKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKY 751
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIY 480
+ A + +++ +K G ++ Y + +SG K G + D L+ + +G D +
Sbjct: 752 NKAFVFWQEMQKQGLIPNVVTYTTM---ISGLAKVGNITDAYSLFERFKTNGGIPDSASF 808
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
+I G+ N + A V EE+ +G RL + L A NK E
Sbjct: 809 NALIEGMSNANRPMEAYQVFEETRLRG---CRLNVKTCISLLDALNKTE 854
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 173/371 (46%), Gaps = 2/371 (0%)
Query: 169 IVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
+V L R + + V+ M P ++++ + A Q +A+++L +++D G
Sbjct: 147 LVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVG 206
Query: 229 LKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEME 287
+ ++ L + + A +L + +KG L +++ YN+ I + K G V
Sbjct: 207 YEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAW 266
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
+ E+ A G PD ++++ ++ L +AGR+ +A E+F M+ + P AYN +I Y
Sbjct: 267 KFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGY 326
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
S FD+ K + + C P++ ++ +++ L K RKV +AL +F+ M + P+
Sbjct: 327 GSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKDAKPNI 385
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T ++ LC G + A + + G +L + +++ RL + ++
Sbjct: 386 STYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFES 445
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
E G + Y +I GL G++++A + E+ L G + ++Y+ L +
Sbjct: 446 ASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGR 505
Query: 528 LESAYNLFRKI 538
E + +++++
Sbjct: 506 KEDGHKIYKEM 516
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 111/237 (46%), Gaps = 5/237 (2%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HP VA +Y IV L + D + + +G+ ++ S ++D F + G++
Sbjct: 627 HPTVA----TYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRID 682
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVI 274
+A +L + GL + + N ++ L + + A F SMK K N TY+I+I
Sbjct: 683 EAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILI 742
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G ++ + + +E+ +G P+ +T++ +I GL + G I DA +F+ K G
Sbjct: 743 NGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGI 802
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
PD+ ++NA+I + E + ++ C N+ T L+ L K+ + A
Sbjct: 803 PDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQA 859
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 99/191 (51%), Gaps = 3/191 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA +LF K + +V Y+ ++ G+ D +L +M K+G+ P++ T +
Sbjct: 648 EAYMLF--EEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 705
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
+MD+ ++ ++ +A+ +++ + + ++++ LC+ A + M+ +
Sbjct: 706 LMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQG 765
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
L NV+TY +ISG +K+G + + + + G PDS +F+ LIEG+ A R +A
Sbjct: 766 LIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAY 825
Query: 323 EVFDTMKEKGC 333
+VF+ + +GC
Sbjct: 826 QVFEETRLRGC 836
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 103/271 (38%), Gaps = 37/271 (13%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
YN V+ S + +E+VL+E+ G+ + + L+ L R+ R++DA V M
Sbjct: 110 AYNAVLPFLSH--DLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAM 167
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ +K+ P YT LI L ++R+
Sbjct: 168 RH--------------------------LKF---------RPPFSAYTVLIGALAEARQP 192
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
ALE+ +M D G S T+ + L G A+ + + + + + Y +
Sbjct: 193 ERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVC 252
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ G M +HE++ G D Y ++ LC G+L A + + +
Sbjct: 253 IDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERD 312
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P Y+ + ++ + + AY L +++
Sbjct: 313 VPCAYAYNTMIMGYGSAERFDDAYKLLERLR 343
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 181/385 (47%), Gaps = 13/385 (3%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+I+ + ++SYN+ ++ L R F VL M +G+ P + + +I+MD + G
Sbjct: 316 SIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLG 375
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYN 271
+ A ++G ++ G+ DA + +L C V AA SL M + L N T N
Sbjct: 376 MLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCN 435
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
I++ K+G++ E E +L+++ +G+ D++T + +++GL +G +D AIE+ M+
Sbjct: 436 ILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVH 495
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G N N+ YI + D + NC P++ TY+ L++GL K+ + A+A
Sbjct: 496 GSAALGNLGNS----YIGLVD--------DSLIENNCLPDLITYSTLLNGLCKAGRFAEA 543
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+F EM+ + P + F+ C G +A + K K GC SL Y L+
Sbjct: 544 KNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILG 603
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L + + L EM+E G + Y I LC ++E+A +++E ++K P+
Sbjct: 604 LGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPN 663
Query: 512 RLVYSKLSNKLLASNKLESAYNLFR 536
+ L + A +F
Sbjct: 664 VFSFKYLIEAFCKVPDFDMAQEVFE 688
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 178/402 (44%), Gaps = 28/402 (6%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN IV + R D ++ M +EG+ PD+ T + + + + G+V A ++ +E
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279
Query: 226 ---DFGL-KFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
GL + ++ + N++L C+ + A +LF S++ L ++ +YNI + G +
Sbjct: 280 LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRH 339
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ +E E VLK++ +G P +++ L++GL + G + DA + MK G PD Y
Sbjct: 340 GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++ Y SVG D + M NC PN T L+ L K ++++A E+ +M +
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE 459
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG----------------------- 437
+G T T ++ LC G A+ + K R G
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENN 519
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
C L Y LL L G+ +L+ EM D Y I C G++ +A
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAF 579
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
V+++ +KG S Y+ L L N++ + L ++K
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMK 621
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 164/379 (43%), Gaps = 25/379 (6%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K V D +Y ++ D ++L +M + P+ T +I++ S + G+
Sbjct: 387 MKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGR 446
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLC--------------QRLHVGAA-SSLFNS 258
+ +A ++L ++ + G D + N+++ LC R+H AA +L NS
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506
Query: 259 MKGKV---------LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
G V L +++TY+ +++G K G+ E + + E++ E PDS+ ++ I
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI 566
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
+ G+I A V M++KGC YN++I E M
Sbjct: 567 HHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGIS 626
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
PN+ TY I L + KV DA + +EM+ + I P+ + +E C A +
Sbjct: 627 PNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEV 686
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
++ A + C Y L+ L G+ +L + + G+ +Y+ ++ LC
Sbjct: 687 FETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCK 745
Query: 490 IGQLENAVLVMEESLRKGF 508
+LE A ++ + + +G+
Sbjct: 746 KDELEVASGILHKMIDRGY 764
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 187/460 (40%), Gaps = 99/460 (21%)
Query: 144 EAMVLFFNWAIKH---PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
E V F +W K +A ++N++++AL D + +M ++G P+ T
Sbjct: 125 ERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFT 184
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
I++ + +AG K +++L +E FG
Sbjct: 185 FGILVRGYCKAGLTDKGLELLNAMESFG-------------------------------- 212
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
VL N + YN ++S + + G+ + E++++++ EG PD +TF+ I L + G++ D
Sbjct: 213 --VLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLD 270
Query: 321 AIEVFDTMK-EKGCG---PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
A +F M+ ++ G P++ YN ++ + VG ++ ++ + + ++ +Y
Sbjct: 271 ASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYN 330
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+ GL++ K +A V ++M D+GI PS + ++ LC G A + ++
Sbjct: 331 IWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRN 390
Query: 437 GCKLSLTAYKLLLRRLSGFGK----------------------CGMLL------------ 462
G Y LL GK C +LL
Sbjct: 391 GVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEA 450
Query: 463 -DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV---------------------- 499
+L +M E GY D ++ GLC G+L+ A+ +
Sbjct: 451 EELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGL 510
Query: 500 MEESLRKGFC-PSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+++SL + C P + YS L N L + + A NLF ++
Sbjct: 511 VDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM 550
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 140/333 (42%), Gaps = 42/333 (12%)
Query: 248 HVGAASSLFNSMKGKVLFN---VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
H+ A F ++ + N V YN+++ K +V + + K++V G +P + T
Sbjct: 90 HIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYT 149
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
F+ LI L + +D A E+FD M EKGC P+ + ++ Y G D+ ++ M
Sbjct: 150 FNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAME 209
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP-- 422
S+ PN Y ++S + + D+ ++ E+M + G+VP T S + LC G
Sbjct: 210 SFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVL 269
Query: 423 -----------------PHAAMMMYKKARKVGCKL--------------------SLTAY 445
P + Y K CK+ SL +Y
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSY 329
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+ L+ L GK + +M + G Y ++ GLC +G L +A ++ R
Sbjct: 330 NIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR 389
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G CP + Y L + + K+++A +L +++
Sbjct: 390 NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM 422
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 85/175 (48%), Gaps = 6/175 (3%)
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
+P++ Y L+ +K R+V ++++M+ GI P T T + LC AA
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIA 485
++ + + GCK + + +L+R G+ K G+ L+L + M+ G + IY +++
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVR---GYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
C G+ +++ ++E+ +G P + ++ + L K+ A +F +++
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMEL 280
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 96/237 (40%), Gaps = 35/237 (14%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN+ + ++ VL DM K+G + LET + ++ Q+++ ++
Sbjct: 558 DSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLM 617
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+++ G+ + + N + LC+ V A++L + M K + NV ++ +I + K+
Sbjct: 618 DEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKV 677
Query: 281 ----------------------------------GQVVEMERVLKEIVAEGFSPDSLTFS 306
GQ+++ +L+ ++ GF + +
Sbjct: 678 PDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYK 737
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
L+E L + ++ A + M ++G G D A VI +G+ E + M
Sbjct: 738 DLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKM 794
>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
Length = 697
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 190/438 (43%), Gaps = 30/438 (6%)
Query: 104 GVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDV 163
GV++ L G IEDA WN DL + N ++
Sbjct: 229 GVYIHGLCRVGSIEDA-WNKIQDL---------------------------RSSNQPLNI 260
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
YN +++ ++ D +L +M EG++PD+ + SI++++F G + + ++
Sbjct: 261 YCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQE 320
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQ 282
+E K VL L + V + F+ + K ++++Y+ +I G+ K
Sbjct: 321 MEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHN 380
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V ++ E+ G PD + + LI R G + +A++ F TM + G PD N
Sbjct: 381 VKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNH 440
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
++ Y S G F+E + Y M N PN TY+ +I+ L K + V A EV M
Sbjct: 441 IVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDN 500
Query: 403 IVPSTGTITSFLEPLC-SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
I PS T+ ++ + P A +Y+K K+GCK +L+ S GK
Sbjct: 501 IFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKA 560
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+L+ EM E G D + +I G C +G ++ A + ++ R P+ Y+ L +
Sbjct: 561 LNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDG 620
Query: 522 LLASNKLESAYNLFRKIK 539
+L+ A L +K
Sbjct: 621 FCKLKRLDMATMLIDDMK 638
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 118/228 (51%), Gaps = 2/228 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M ++G+ PD+ T + ++D + GQ +A+ + +++D + ++ + +V++ LC+
Sbjct: 426 MLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQA 485
Query: 249 VGAASSLFNSM-KGKVLFNVMTYNIVISGWSK-LGQVVEMERVLKEIVAEGFSPDSLTFS 306
V A + M K + +V+ Y ++ G++K ++ ++ +++ G PD++T +
Sbjct: 486 VEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLT 545
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
L++ + G++ A+ +F M E+G D A+ A+I Y VG+ YK M
Sbjct: 546 VLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRN 605
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
N PN+ TYT L+ G K +++ A + ++M + P T T+ +
Sbjct: 606 NVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALI 653
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 156/356 (43%), Gaps = 6/356 (1%)
Query: 190 AKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHV 249
+ E V LS+++ F + A + + + G++ + S N +L CL + +
Sbjct: 107 SPECVGRSATVLSLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKL 166
Query: 250 GAASSLFNSMKGK-VLFNVMTYNIVISGWSK--LGQVVEMER---VLKEIVAEGFSPDSL 303
A SLF+ +K NV TY I+I+ + K GQ ++ME+ +L+E+ +G +P +
Sbjct: 167 EAVRSLFDDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVV 226
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T+ I GL R G I+DA ++ + YNA+I + G DE +K + M
Sbjct: 227 TYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEM 286
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
P++ +Y+ L++ + + + +EM P TS L L + G
Sbjct: 287 KDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLV 346
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
+ + + + G K L +Y L+ +L HEM+++G D IY +
Sbjct: 347 NDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISL 406
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I C G L+ A+ L+ G P + + + ++ + + E A ++K
Sbjct: 407 IREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMK 462
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 127/333 (38%), Gaps = 42/333 (12%)
Query: 228 GLKFDAESL--NVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE 285
GL+ +A+ L ++V + + L+V S F V + +++I ++ + +
Sbjct: 74 GLQREAQYLLTDIVFYYKEENLNVSGLFSTFLDSPECVGRSATVLSLLIKVFASNKMLAD 133
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+ V + G + + +FL++ L +++ +FD +K G P+ Y +I+
Sbjct: 134 AKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMIN 193
Query: 346 NYIS----------------------------------------VGDFDECMKYYKGMSS 365
Y VG ++ + + S
Sbjct: 194 FYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRS 253
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
N N+ Y LI G + + +AL++ EEM D GI P + + + C+ G +
Sbjct: 254 SNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIES 313
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
M + ++ K L +L L G L+ +HE+ GY D Y +I
Sbjct: 314 GMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIH 373
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
G +++A ++ E + G P ++Y L
Sbjct: 374 GFLKGHNVKSANNLVHEMRKNGLVPDYIIYISL 406
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++ +A+K+G +L++++ LL+ L+ K + L+ +++ SG + Y +I C
Sbjct: 137 VFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMINFYC 196
Query: 489 N--IGQ---LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
GQ +E A L++EE KG P+ + Y + L +E A+N + ++ + Q
Sbjct: 197 KERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQ 256
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 185/385 (48%), Gaps = 1/385 (0%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H + + ++ ++ + K + + ++ + M G+ PD+ TL+I+++SF ++
Sbjct: 105 HMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLG 164
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVI 274
A +L +L G + D + N ++ LC +G A LF+ G+ +V+TY ++
Sbjct: 165 YAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLM 224
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G K+G R+L+ +V + P+ + ++ +I+ L + ++ +A +F M KG
Sbjct: 225 NGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGIS 284
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN++I ++ ++ M + PN+ ++ ++ L K +A A +V
Sbjct: 285 PDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDV 344
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ M+ RG+ P T T+ ++ C A+ ++ GC ++ +Y +L+
Sbjct: 345 VDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQ 404
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+ + L +M G +D Y +I GLC++G+L++A+ + E + G P +
Sbjct: 405 IQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVT 464
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
Y L + L ++ L A L + I+
Sbjct: 465 YRILLDYLCKNHHLAEAMVLLKAIE 489
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 156/336 (46%), Gaps = 1/336 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D ++N +++ L ++ EG PD+ T +M+ + G AI++L
Sbjct: 181 DNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLL 240
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ + + + N ++ LC+ V A +LF+ M K + ++ TYN +I L
Sbjct: 241 RSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNL 300
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ + +L E+V P+ + FS +++ L + G I A +V D M ++G PD Y
Sbjct: 301 CEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTY 360
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
A++ + + DE +K + M C PN+ +Y LI+G + +++ A+ + E+M
Sbjct: 361 TALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSL 420
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G++ T T + + LC G A+ ++ + G L Y++LL L
Sbjct: 421 QGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAE 480
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
+ L ++ S +D +Y I G+C G+LE A
Sbjct: 481 AMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAA 516
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 143/315 (45%), Gaps = 1/315 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y ++ L + +L M ++ P++ + ++DS + QV +A +
Sbjct: 216 DVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLF 275
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ G+ D + N ++ LC ++L N M K++ NV+ ++ V+ K
Sbjct: 276 SEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKE 335
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + V+ ++ G PD +T++ L++G +D+A++VFDTM KGC P+ +Y
Sbjct: 336 GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 395
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I+ Y + D+ M + MS + TY LI GL ++ A+ +F EM+
Sbjct: 396 NILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 455
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G +P T L+ LC AM++ K + Y + + + G+
Sbjct: 456 SGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEA 515
Query: 461 LLDLWHEMQESGYPS 475
DL+ + G+ +
Sbjct: 516 ARDLFSNLSCQGFAA 530
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 127/275 (46%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V T NI+I+ + L ++ VL +++ G PD+ TF+ LI GL G+I +A+ +F
Sbjct: 146 DVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLF 205
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D +G PD Y +++ VG+ ++ + M NC PN+ Y +I L K
Sbjct: 206 DKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKD 265
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
R+V +A +F EM+ +GI P T S + LC+ + + ++ +
Sbjct: 266 RQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF 325
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
++ L G + D+ M + G D Y ++ G C +++ AV V + +
Sbjct: 326 STVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 385
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
KG P+ Y+ L N +++ A L ++ +
Sbjct: 386 KGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSL 420
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 85/186 (45%)
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
D+ + + M + P+ +T+L++ + K + + L + +M GI P T+
Sbjct: 93 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
+ C A + K K+GC+ T + L+R L GK G L L+ + G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
+ D Y ++ GLC +G A+ ++ ++K P+ + Y+ + + L ++ A+
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272
Query: 533 NLFRKI 538
NLF ++
Sbjct: 273 NLFSEM 278
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 100/252 (39%), Gaps = 35/252 (13%)
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY----------- 366
+DDA+ F+ M P T + ++++ + + + M S+
Sbjct: 93 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152
Query: 367 ------------------------NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
C+P+ T+ LI GL K+ +AL +F++ + G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P T + + LC G AA+ + + + C+ ++ AY ++ L +
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+L+ EM G D Y +I LCN+ + ++ ++ E + P+ +V+S + + L
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332
Query: 523 LASNKLESAYNL 534
+ A+++
Sbjct: 333 CKEGMIAIAHDV 344
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H +V+SYN+++ + + D +L M+ +G+ D T + ++ G++
Sbjct: 385 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQ 444
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVI 274
AI + + G D + ++L LC+ H+ A L +++G L +++ YNI I
Sbjct: 445 HAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAI 504
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFS 299
G + G++ + + +GF+
Sbjct: 505 DGMCRAGELEAARDLFSNLSCQGFA 529
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 190/425 (44%), Gaps = 43/425 (10%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V Y+ K LG F F +V S +AK+G+ P L+T + ++ S ++A ++ K+ ++
Sbjct: 190 VHVYSTQFKHLG----FGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYD 245
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLG 281
+ G+ D + ++ C+ A LF+ M K V NV+TYN +I G K G
Sbjct: 246 FICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSG 305
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ E R +++V E SP +T+S I GL + +ID+A V M E G P+ YN
Sbjct: 306 RLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYN 365
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I Y +G+ E +K M S PN T LI G KS ++ A V EEM+ R
Sbjct: 366 TLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGR 425
Query: 402 GIV-----------------------------------PSTGTITSFLEPLCSYGPPHAA 426
G+ P+ G +T+ + LC G A
Sbjct: 426 GLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEA 485
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ ++ + G ++ L+ L G L L +M E G D Y +I+G
Sbjct: 486 VELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISG 545
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDY 546
C G+++ + EE ++KG P ++ L + L ++K++ A L+ + K +N Y
Sbjct: 546 CCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECK---KNGY 602
Query: 547 ARRLW 551
++
Sbjct: 603 VPNVY 607
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 179/396 (45%), Gaps = 43/396 (10%)
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNV 238
+DF+C G+ PD+ S ++++F + + AI + ++E G+ + + N
Sbjct: 244 YDFIC-------LGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNN 296
Query: 239 VLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
++ LC+ + A M K KV +++TY++ I+G KL ++ E VLKE+ G
Sbjct: 297 IIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELG 356
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY---------- 347
F P+ + ++ LI+G + G I +A+++ D M KG P++ N++I +
Sbjct: 357 FVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAE 416
Query: 348 ------------ISVGDFDE-----CMK--------YYKGMSSYNCEPNMDTYTRLISGL 382
I+ G F C+K + + M N PN T L+SGL
Sbjct: 417 NVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGL 476
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K+ K +A+E++ +L +G VP+ T + + LC G + + + + G
Sbjct: 477 CKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDR 536
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L+ GK +L EM + G D + ++ GLCN +++ A + E
Sbjct: 537 ITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHE 596
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ G+ P+ Y + + +NK+E NL ++
Sbjct: 597 CKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNEL 632
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 171/371 (46%), Gaps = 1/371 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S+++++ L + F + + +M + P+ L+ ++ +AG+ +A+++ RL
Sbjct: 433 SFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRL 492
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
G + + N ++ LC+ ++ L M + ++F+ +TYN +ISG K G+V
Sbjct: 493 LGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKV 552
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E + +E+V +G PD TF+ L+ GL A +ID+A ++ K+ G P+ Y +
Sbjct: 553 KEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVM 612
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I Y +E + S E N Y LI + + A + ++M RG+
Sbjct: 613 IDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGV 672
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+ S T +S + LC+ G A + + RK G ++ Y ++ S G+ +
Sbjct: 673 LLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNI 732
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ EM + Y +I G C +G+ + A ++ E KG P + Y+ +N L
Sbjct: 733 VLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLC 792
Query: 524 ASNKLESAYNL 534
K+E A+ +
Sbjct: 793 KEGKVEEAFKV 803
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 180/403 (44%), Gaps = 3/403 (0%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
+G+ +A+ LF ++ VA +V +YN I+ L + D M KE V+P
Sbjct: 268 KGHREDDAIGLF--SKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPS 325
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
L T S+ ++ I+ ++ +A +L + + G + N ++ C+ ++ A + +
Sbjct: 326 LITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRD 385
Query: 258 SMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
M K + N +T N +I G+ K Q+ + E VL+E++ G + +FS +I L
Sbjct: 386 DMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKF 445
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
R A+ M + P+ ++S G E ++ + + PN+ T
Sbjct: 446 RFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSN 505
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
LI GL K+ + + L++ +ML+RG+V T + + C G + ++ K
Sbjct: 506 ALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKK 565
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G + + + LLL L K LWHE +++GY + Y +I G C ++E
Sbjct: 566 GIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEG 625
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ E + K + +VY+ L + + +A+ L +K
Sbjct: 626 ENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMK 668
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 135/301 (44%), Gaps = 40/301 (13%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PN+ + N ++ L + +L DM + G+ D T + ++ + G+V +
Sbjct: 499 PNIV----TSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKE 554
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVIS 275
++ + G++ D + N++L LC + AS L++ K + NV TY ++I
Sbjct: 555 GFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMID 614
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSL-------------------------------- 303
G+ K +V E E +L E+V++ +S+
Sbjct: 615 GYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLL 674
Query: 304 ---TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
T+S L+ GL G +DDA + D M+++G P+ Y +I Y +G ++
Sbjct: 675 SCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVL 734
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
+ MSS+N PN TYT +I G K K +A ++ EM ++GI+P T +F LC
Sbjct: 735 QEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKE 794
Query: 421 G 421
G
Sbjct: 795 G 795
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 43/192 (22%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNV---------LSDMAKEGVNPDLETLSIVMDSFIRAG 212
D+KS V++ +CN+ L +M KEG+ P++ + ++ + + G
Sbjct: 666 DMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLG 725
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNI 272
Q+ K +N+VL + + N TY I
Sbjct: 726 QMNK-------------------VNIVLQEMSSH---------------NIHPNKFTYTI 751
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G+ KLG+ E ++L E+ +G PD++T++ GL + G++++A +V D M
Sbjct: 752 MIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGA 811
Query: 333 CGPDTNAYNAVI 344
D Y +I
Sbjct: 812 VCLDEITYTTLI 823
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 139/578 (24%), Positives = 252/578 (43%), Gaps = 90/578 (15%)
Query: 5 SRFYRTRYPLSSLSSSFSLFSFSTSVR-----SNLSYNELLSNQKKNMSSLDEHHVLKEL 59
+RF+ +++ + S SF+ +R S + +N+LL++ ++ + H L L
Sbjct: 30 NRFHSKSLHFNTIDGAIS--SFNRMLRMQPPPSTVDFNKLLTS----IAKMKHHSTLLSL 83
Query: 60 SDLFQISSHNSFPNVYK-ESRSNS---VKRIDSSRAVDEFLL-----PEERLRGVFLQKL 110
S Q+ S PN+Y NS + R+ + +V +L P+ ++ +
Sbjct: 84 S--HQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGI 141
Query: 111 KGKGVIEDALW----NVNVDLSLDVV--GKVVNR----GNLSGEAMVLFFNWAIKHPNVA 160
+G I +AL + DVV G ++N GN S +L ++ N
Sbjct: 142 CVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLL---GSMVQKNCQ 198
Query: 161 KDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
+V +YN I+ +L + + N+ S+M +G++PD+
Sbjct: 199 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDI---------------------- 236
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSK 279
F SL L LC+ HV ++L N M K++ +V+++N V+ K
Sbjct: 237 ----------FTYNSLIHALCNLCEWKHV---ATLLNEMVDSKIMPDVVSFNTVVDALCK 283
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G+V E V+ +++ G P+ +T++ L++G +D+A++VFDTM KGC P+ +
Sbjct: 284 EGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVIS 343
Query: 340 YNAVISNYISVG-------------------DFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
YN +I+ Y + + DE +K + M C PN+ +Y LI+
Sbjct: 344 YNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLIN 403
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
G K +++ A+ +F EM + ++P T T ++ + LC A+ ++ +
Sbjct: 404 GYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIP 463
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+L Y++LL L + L ++ S D ++ I G+C G+LE A +
Sbjct: 464 NLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLF 523
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
KG P YS + N L L+ A LFR++
Sbjct: 524 SNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREM 561
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 182/398 (45%), Gaps = 20/398 (5%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
+N ++ ++ + K + ++ M G+ P++ TL I+++SF +V A +L ++
Sbjct: 64 FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVV 284
G + D + ++ +C +G A LF+ M G+ +V+TY +I+G K+G
Sbjct: 124 KLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
R+L +V + P+ ++ +I+ L + ++ +A +F M KG PD YN++I
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLI 243
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
++ ++ M P++ ++ ++ L K KV +A +V ++M+ RG+
Sbjct: 244 HALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVE 303
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL------RRLSGFGKC 458
P+ T T+ ++ C A+ ++ GC ++ +Y L+ +R+
Sbjct: 304 PNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHY 363
Query: 459 GMLLD---LWHEMQESGYPSDGEI----------YEYVIAGLCNIGQLENAVLVMEESLR 505
L+D + M E+ D + Y +I G C I +++ A+ + E R
Sbjct: 364 TXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCR 423
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
+ P + YS L + L +L+ A LF ++ Q
Sbjct: 424 QELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQ 461
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 170/379 (44%), Gaps = 17/379 (4%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D ++ +++ + ++ M EG PD+ T +++ + G AI++L
Sbjct: 130 DTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLL 189
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
G + + + + N ++ LC+ V A +LF+ M K + ++ TYN +I L
Sbjct: 190 GSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNL 249
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ + +L E+V PD ++F+ +++ L + G++ +A +V D M ++G P+ Y
Sbjct: 250 CEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTY 309
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
A++ + + + DE +K + M C PN+ +Y LI+G K +++ A+
Sbjct: 310 TALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHY------ 363
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
T ++ C Y A+ ++ GC ++ +Y L+ +
Sbjct: 364 ----------TXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDK 413
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ L+ EM D Y +I GLC++ +L++A+ + E + P+ + Y L +
Sbjct: 414 AMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLD 473
Query: 521 KLLASNKLESAYNLFRKIK 539
L + L A L + I+
Sbjct: 474 YLCKNRYLAEAMALLKAIE 492
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 178/385 (46%), Gaps = 22/385 (5%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA LF K ++ D+ +YN ++ AL + + +L++M + PD+ + +
Sbjct: 219 EAFNLFSEMVTK--GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNT 276
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
V+D+ + G+V +A ++ ++ G++ + + ++ C + A +F++M K
Sbjct: 277 VVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKG 336
Query: 263 VLFNVMTYNIVISGWSKLGQVV-------------------EMERVLKEIVAEGFSPDSL 303
+ NV++YN +I+G+ K+ ++ E +V +V +G P+ +
Sbjct: 337 CMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVI 396
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
+++ LI G + RID A+ +F M + PDT Y+ +I V + + + M
Sbjct: 397 SYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEM 456
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ + PN+ TY L+ L K+R +A+A+ + + + + P ++ +C G
Sbjct: 457 VACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGEL 516
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
AA ++ G + + Y +++ L G L+ EM E+G +G IY +
Sbjct: 517 EAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTI 576
Query: 484 IAGLCNIGQLENAVLVMEESLRKGF 508
G + A+ +++E + +GF
Sbjct: 577 TRGFLRNNETSRAIQLLQEMVARGF 601
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 156/353 (44%), Gaps = 20/353 (5%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV S+N +V AL + +V+ M + GV P++ T + +MD ++ +A+
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAV 326
Query: 219 QMLGRLEDFGLKFDAESLNVVL--WCLCQR-----------------LHVGAASSLFNSM 259
++ + G + S N ++ +C QR L++ A +F++M
Sbjct: 327 KVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTM 386
Query: 260 KGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
K + NV++YN +I+G+ K+ ++ + + E+ + PD++T+S LI GL R+
Sbjct: 387 VCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERL 446
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
DAI +F M P+ Y ++ E M K + N +P++
Sbjct: 447 QDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIA 506
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I G+ ++ ++ A ++F + +G+ P T + + LC G A ++++ + GC
Sbjct: 507 IDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGC 566
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
L+ Y + R + + L EM G+ +D + L + G
Sbjct: 567 TLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 619
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 196/433 (45%), Gaps = 13/433 (3%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L+++K G +A+ + + L G+VV EA+ F A + A DV +
Sbjct: 31 LLEEMKSNGFEGNAVVHTTLMKGLCDAGRVV-------EALEHFRAMA---KDCAPDVMT 80
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y +V AL + FD +L +M G PD T S ++D + G +A ++L +
Sbjct: 81 YTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVI 140
Query: 226 DFGLKFDAESLNVVLWCLCQRLH-VGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
G+ + ++ LC + + V AS + + K V+ +N+VI+G+ K +
Sbjct: 141 QRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDL 200
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
++L+ ++ +G P+ TF+ LI GL +A R+ +A ++ + M GC P+ Y+ V
Sbjct: 201 DSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTV 260
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I+ G D+ + ++ M NC PN+ T+ LI GL K++++ +A +++ M + G
Sbjct: 261 INGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGC 320
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS-LTAYKLLLRRLSGFGKCGMLL 462
P T S ++ LC A +++ + G + Y L + G+
Sbjct: 321 APDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADAC 380
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
++ + + G+ D Y +I C + V ++EE KGF P S + L
Sbjct: 381 RIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGL 440
Query: 523 LASNKLESAYNLF 535
N E A LF
Sbjct: 441 FEGNHTERAIQLF 453
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 168/377 (44%), Gaps = 37/377 (9%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P+ T I++ F AG + AIQ+L ++ G + +A ++ LC V A
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 256 FNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
F +M +VMTY ++ K G+ E + +L+E++A G +PD++TFS LI+GL +
Sbjct: 67 FRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKF 126
Query: 316 GRIDDAIEVFDTMKEKGCG------------------------------------PDTNA 339
G + A V + + ++G G P
Sbjct: 127 GSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLM 186
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
+N VI+ + D D K + M C PN+ T+T LI+GL K+ +V +A ++ E+M+
Sbjct: 187 FNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV 246
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
G P+ T ++ + LC G A +++ + C ++ + +L+ L +
Sbjct: 247 TGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIE 306
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV-YSKL 518
L+H M+E+G D Y +I GLC Q++ A + + G + V YS L
Sbjct: 307 EARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTL 366
Query: 519 SNKLLASNKLESAYNLF 535
+ A ++ A +F
Sbjct: 367 FHGYAALGRMADACRIF 383
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 187/409 (45%), Gaps = 7/409 (1%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
+ N GEA L + +V +Y+ ++ L ++ D + M + P+
Sbjct: 231 KANRVGEAQQLLEKMVTG--GCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPN 288
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ T +I++D +A ++ +A Q+ R+ + G D + N ++ LC+ V A LF
Sbjct: 289 VVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQ 348
Query: 258 SM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
++ G N +TY+ + G++ LG++ + R+ +V +GFSPD T++ LI +
Sbjct: 349 TIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKT 408
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
R + +E+ + M KG P N +AV+ + ++ + M++ C + Y
Sbjct: 409 SRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIY 468
Query: 376 TRLISGLLKSRKVADALEVFEEML---DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
++ G+ ++ K AL V E+++ DR PS+ + + +E LC G A + K
Sbjct: 469 NLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHK 528
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+ G ++++Y LL LS + ++ M +G + VI+ LC+ +
Sbjct: 529 MSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAK 588
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
+++A +++ + G CP + L S + + A L ++ A
Sbjct: 589 VDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEA 637
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 139/310 (44%), Gaps = 37/310 (11%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N TY I+I G+S G + ++L+E+ + GF +++ + L++GL AGR+ +A+E F
Sbjct: 8 NKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHF 67
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
M K C PD Y A++ G FDE + M + C P+ T++ LI GL K
Sbjct: 68 RAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKF 126
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLC-----------------SYGPPHAAMM 428
A V E+++ RG+ S + ++ LC + G +M
Sbjct: 127 GSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLM 186
Query: 429 M------YKKARKV-------------GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
+ KA+ + GC ++ + +L+ L + G L +M
Sbjct: 187 FNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV 246
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
G + Y VI GLC GQ+++A + + R+ P+ + ++ L + L + ++E
Sbjct: 247 TGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIE 306
Query: 530 SAYNLFRKIK 539
A L+ +++
Sbjct: 307 EARQLYHRMR 316
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 133/281 (47%), Gaps = 7/281 (2%)
Query: 172 ALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF 231
ALGR C + S + +G +PDL T + ++ + + + + ++++ + G
Sbjct: 372 ALGR---MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPP 428
Query: 232 DAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVL 290
+L+ VL L + H A LF+SM + + + YN+V+ G ++ + + VL
Sbjct: 429 RVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVL 488
Query: 291 KEIVAE---GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
++++ + F+P S L+E L + GR DDA ++ M E+G ++YN ++S
Sbjct: 489 EQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGL 548
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
+ +DE + ++ M S P + T +IS L + KV DA E+ + M G P
Sbjct: 549 SRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDI 608
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
T + + C G A + ++ + G + + T + LL
Sbjct: 609 ETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 2/204 (0%)
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
C P+ Y +I + S GD D ++ + M S E N +T L+ GL + +V +AL
Sbjct: 5 CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
E F M + P T T+ + LC G A M ++ GC + L+ L
Sbjct: 65 EHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN-IGQLENAVLVMEESLRKGFCPS 511
FG + ++ + G + +E +I LCN +E A V+ + KGF P+
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 183
Query: 512 RLVYSKLSNKLLASNKLESAYNLF 535
L+++ + N + L+SAY L
Sbjct: 184 VLMFNLVINGFCKAKDLDSAYKLL 207
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 188/413 (45%), Gaps = 36/413 (8%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y +++ L N + +G+ D + +++ + GQ A+++L
Sbjct: 118 DIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLL 177
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
++E + D N ++ LC+ V A L+ M K +F NV+TY +I G+ +
Sbjct: 178 RKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIV 237
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
GQ+ + +L E+V + +P+ TF+ L++GL + G++ +A + M ++G GPD Y
Sbjct: 238 GQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTY 297
Query: 341 NAVISNYISVGD-----------------------------------FDECMKYYKGMSS 365
NA++ Y V + DE M ++GM +
Sbjct: 298 NALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRN 357
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
N P++ Y+ LI GL KS ++ AL+ +EM DRG P+ T TS ++ LC
Sbjct: 358 ENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDK 417
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ + KK + G + ++ Y +L+ L G+ ++ ++ G+ D Y +I
Sbjct: 418 AIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMIN 477
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GLC + A+ ++ + KG P + Y + N + + A L R++
Sbjct: 478 GLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 166/380 (43%), Gaps = 36/380 (9%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P + ++ S ++ I + R+E G++ + +LN+++ C + +A S+
Sbjct: 47 PPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSV 106
Query: 256 FN---------------------SMKGKV---------------LFNVMTYNIVISGWSK 279
F + G+V + ++Y +I+G K
Sbjct: 107 FAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCK 166
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
+GQ R+L++I E PD + ++ +I+GL + + DA +++ M EK P+
Sbjct: 167 IGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVT 226
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y ++I + VG D+ M N PN+ T+ L+ GL K K+ +A + M+
Sbjct: 227 YTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMM 286
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
G+ P T + ++ A ++ ++G + +Y +++ LS
Sbjct: 287 KEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLD 346
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+DL+ M+ D Y +I GLC G++ +A+ ++E +G P+ + Y+ L
Sbjct: 347 EAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLI 406
Query: 520 NKLLASNKLESAYNLFRKIK 539
+ L S++++ A L +KIK
Sbjct: 407 DALCKSHQVDKAIALLKKIK 426
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 117/279 (41%), Gaps = 36/279 (12%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
NV +V ++N +V L + ++++ M KEGV PD+ T + +MD + + KA
Sbjct: 254 NVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKA 313
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF------------ 265
+ + G+ D S +V++ L + + A LF M+ + +
Sbjct: 314 KNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDG 373
Query: 266 ------------------------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
NV+TY +I K QV + +LK+I +G +
Sbjct: 374 LCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQAN 433
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
T++ L++GL + GR+ DA +VF + KG D Y+ +I+ FDE +
Sbjct: 434 MYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLS 493
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
M C P+ Y +I+ + A ++ EM+D
Sbjct: 494 KMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/191 (19%), Positives = 86/191 (45%)
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+++ S+ + ++ + + M P + + +++ L+K++ + +F+ M GI
Sbjct: 22 THFHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQ 81
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
+ T+ + C ++A ++ K K+G + + Y L+R L G+ L+
Sbjct: 82 SNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNF 141
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+ G D Y +I GLC IGQ A+ ++ + + P ++Y+ + + L
Sbjct: 142 HDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCK 201
Query: 525 SNKLESAYNLF 535
+ A++L+
Sbjct: 202 DKLVRDAFDLY 212
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 194/434 (44%), Gaps = 14/434 (3%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L+ + G + DA+ L V+ +V +G ++ AM+L + A DV +
Sbjct: 199 LLRGMARHGCVPDAV------LYQTVIHALVAQGGVAEAAMLLDEMLLM---GCAADVNT 249
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
+N +V L ++ M +G P + T ++ R Q +A MLGRL
Sbjct: 250 FNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLP 309
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
+ + LN V+ + A+ L+ M K +V TY+I++ G KLG+
Sbjct: 310 EVNVVM----LNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFG 365
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
R+L E+ +G +P+ +T+S L+ R G DDA + D M KG ++ YN +I
Sbjct: 366 SAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGII 425
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
G D+ + + M S C+P++ TY +I L + + +A +F +++ G+V
Sbjct: 426 YALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVV 485
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
+ T + + L G + + + GC+L + +Y L++ L G + L
Sbjct: 486 ANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMAL 545
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
EM G + Y +I LC G++ +A+ + +E L +G P + Y+ L N L
Sbjct: 546 LEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCK 605
Query: 525 SNKLESAYNLFRKI 538
+A NL K+
Sbjct: 606 VGWTHAALNLLEKL 619
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 192/436 (44%), Gaps = 49/436 (11%)
Query: 87 DSSRAVDEFL----LPEERLRGVFLQKLKGKGVIEDA------LWNVNVDLSLDVVGKVV 136
+++R VD + +P G LQ L ++A L VNV + V+ +
Sbjct: 265 EAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVIRGCL 324
Query: 137 NRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNP 196
G L+ A L+ K DV +Y++++ L + F +L +M ++G P
Sbjct: 325 TEGKLA-RATELYEMMGSK--GCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAP 381
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
++ T S ++ SF R G A ML ++ G +++ N +++ LC+ + A+ L
Sbjct: 382 NIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLV 441
Query: 257 NSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
MK + ++ TYN +I + E E + + ++ EG + +T++ LI L R
Sbjct: 442 QEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRN 501
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
GR + + + M GC D +YN +I G+ D M + M + +PN +Y
Sbjct: 502 GRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSY 561
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
LI+ L K+ KV DALE+ +EML++G+ P T + + LC G HAA+ + +K
Sbjct: 562 NMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPN 621
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
+ Y +L+ WH C + L++
Sbjct: 622 ENVHPDIVTYNILIS--------------WH---------------------CKVRLLDD 646
Query: 496 AVLVMEESLRKGFCPS 511
A +++++++ G P+
Sbjct: 647 AAMLLDKAISGGIVPN 662
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 111/250 (44%), Gaps = 4/250 (1%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
+YN+V+S ++ + + + ++ + P + TF L R GR DA+ + M
Sbjct: 144 SYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGM 203
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
GC PD Y VI ++ G E M C +++T+ L+ GL +V
Sbjct: 204 ARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRV 263
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A + + M+ +G +PS T L+ LC A M + +V ++ +
Sbjct: 264 REAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEV----NVVMLNTV 319
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+R GK +L+ M G P D Y ++ GLC +G+ +AV +++E KG
Sbjct: 320 IRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGC 379
Query: 509 CPSRLVYSKL 518
P+ + YS L
Sbjct: 380 APNIVTYSTL 389
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 143/326 (43%), Gaps = 6/326 (1%)
Query: 216 KAIQMLGRL-EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIV 273
+A+ +L ++ F + S NVVL L + A L+ M + +V T+ +
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 183
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
+LG+ + +L+ + G PD++ + +I L G + +A + D M GC
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
D N +N ++ +G E + M + C P++ TY L+ GL ++R+ +A
Sbjct: 244 AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACA 303
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+ + + +V I L + G A +Y+ GC + Y +L+ L
Sbjct: 304 MLGRLPEVNVVMLNTVIRGCL----TEGKLARATELYEMMGSKGCPPDVHTYSILMHGLC 359
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
G+ G + + EM+E G + Y ++ C G ++A ++++ L KGF +
Sbjct: 360 KLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQ 419
Query: 514 VYSKLSNKLLASNKLESAYNLFRKIK 539
Y+ + L KL+ A L +++K
Sbjct: 420 GYNGIIYALCKDGKLDQATRLVQEMK 445
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 111/233 (47%), Gaps = 1/233 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K D+ +YN ++ L + ++ ++ +EGV + T + ++ + +R G+
Sbjct: 444 MKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGR 503
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
+ +++ + G + D S N ++ LC+ +V + +L M K + N +YN+
Sbjct: 504 WQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNM 563
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I+ K G+V + + KE++ +G +PD +T++ LI GL + G A+ + + + +
Sbjct: 564 LINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNEN 623
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
PD YN +IS + V D+ S PN T+ ++ ++
Sbjct: 624 VHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVRQ 676
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 88/193 (45%), Gaps = 22/193 (11%)
Query: 96 LLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIK 155
L E L G L + G+I+ NVD S+ ++ ++V +G IK
Sbjct: 510 LASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKG--------------IK 555
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
N SYN+++ L + + +M +G+ PD+ T + +++ + G +
Sbjct: 556 PNNF-----SYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTH 610
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQ-RLHVGAASSLFNSMKGKVLFNVMTYNIVI 274
A+ +L +L + + D + N+++ C+ RL AA L ++ G ++ N T+ +++
Sbjct: 611 AALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMV 670
Query: 275 SGWSKLGQVVEME 287
+ + Q V +E
Sbjct: 671 QNFVR--QTVNLE 681
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 177/410 (43%), Gaps = 36/410 (8%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YNV++ L + + +L M G P+ T ++++ + R + +A+++L +
Sbjct: 82 TYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 141
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSL-----FNSMKGKVLF-------------- 265
E L A S ++ LC + A+ L F+ +K V+
Sbjct: 142 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRI 201
Query: 266 -----------------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
++ YN +IS SK G++ E L EI G PD++TF
Sbjct: 202 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 261
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I G + G++ +A + FD M + G P+ Y +I+ + G+ E + ++ + +
Sbjct: 262 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGV 321
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P++ T + I GLLK+ +V +AL+VF E+ ++G+VP T +S + C G A
Sbjct: 322 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 381
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++ + G ++ Y L+ L G L+ M E G D Y +I G C
Sbjct: 382 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 441
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ A + E KG P VY+ L + +E A NLFR++
Sbjct: 442 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM 491
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 179/387 (46%), Gaps = 3/387 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N+ SY ++ L K +L M G+ P++ S ++ + G++ +A
Sbjct: 145 NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEA 204
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISG 276
++L + G+ D N ++ CL + + AS+ ++G+ L + +T+ I G
Sbjct: 205 RRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILG 264
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+SK G++ E + E++ G P++ ++ LI G +AG + +A+ +F + G PD
Sbjct: 265 YSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPD 324
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+A I + G E +K + + P++ TY+ LISG K +V A E+ +
Sbjct: 325 VQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHD 384
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
EM +GI P+ + ++ LC G A ++ + G + Y ++
Sbjct: 385 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 444
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
L+HEM G +Y ++ G C G +E A+ + E L+KGF + L ++
Sbjct: 445 NVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFN 503
Query: 517 KLSNKLLASNKLESAYNLFRKIKIARQ 543
L + S K++ A LF+++ IA+Q
Sbjct: 504 TLIDGYCKSCKIQEASQLFQEM-IAKQ 529
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 159/348 (45%), Gaps = 8/348 (2%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
VA D+ YN I+ L + + L ++ G+ PD T + + + G++ +A
Sbjct: 216 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAA 275
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGW 277
+ + D GL + V++ + ++ A S+F + VL +V T + I G
Sbjct: 276 KYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGL 335
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G+V E +V E+ +G PD T+S LI G + G ++ A E+ D M KG P+
Sbjct: 336 LKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 395
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YNA++ GD K + GM EP+ TY+ +I G KS VA+A +F E
Sbjct: 396 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 455
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M +G+ P + + + C G AM ++++ + G +L+ L + G+ K
Sbjct: 456 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTL----IDGYCK 511
Query: 458 CGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
+ + L+ EM D Y VI C G++E A L+ +E
Sbjct: 512 SCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKE 559
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 172/356 (48%), Gaps = 2/356 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+L M+ GV PD+ + ++ +AG++ +A L ++ GLK DA + +
Sbjct: 207 LLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYS 266
Query: 245 QRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ + A+ F+ M L N Y ++I+G K G ++E + + + A G PD
Sbjct: 267 KTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQ 326
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T S I GL + GR+ +A++VF +KEKG PD Y+++IS + G+ ++ + + M
Sbjct: 327 TCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEM 386
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
PN+ Y L+ GL KS + A ++F+ M ++G+ P + T ++ ++ C
Sbjct: 387 CLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENV 446
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A ++ + G + Y L+ G ++L+ EM + G+ + + +
Sbjct: 447 AEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTL 505
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I G C +++ A + +E + K P + Y+ + + + K+E A LF++++
Sbjct: 506 IDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 561
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 174/441 (39%), Gaps = 104/441 (23%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y +I L R K + +M K G+ PD S ++D F+R G + + + R+
Sbjct: 12 TYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVL----RI 67
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVV 284
+D V++ C + N++TYN++I G K G++
Sbjct: 68 KD-----------VMVSC-------------------GIPINLITYNVLIHGLCKFGKME 97
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK------------- 331
+ +LK ++ G P+S TF LIEG R + A+E+ D M+++
Sbjct: 98 KAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMI 157
Query: 332 ----------------------GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
G P+ Y+ +I Y S G +E + GMS
Sbjct: 158 NGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVA 217
Query: 370 PNMDTYTRLISGLLKSRKVADA----LEV------------------------------- 394
P++ Y +IS L K+ K+ +A LE+
Sbjct: 218 PDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKY 277
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F+EMLD G++P+ T + G A+ +++ +G + + L
Sbjct: 278 FDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLK 337
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G+ L ++ E++E G D Y +I+G C G++E A + +E KG P+ +
Sbjct: 338 NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFI 397
Query: 515 YSKLSNKLLASNKLESAYNLF 535
Y+ L + L S ++ A LF
Sbjct: 398 YNALVDGLCKSGDIQRARKLF 418
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 124/308 (40%), Gaps = 35/308 (11%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N TY I+ +G + ++ E + +E+ G PD S LI+G R G ID+ + +
Sbjct: 9 NTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIK 68
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M G + YN +I G ++ + KGM + C+PN T+ LI G +
Sbjct: 69 DVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCRE 128
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+ ALE+ +EM R +VPS + + + LC A + +K G K ++ Y
Sbjct: 129 HNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVY 188
Query: 446 KLLL-------------RRLSGFGKCGMLLDLWH----------------------EMQE 470
L+ R L G G+ D++ E+Q
Sbjct: 189 STLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG 248
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G D + I G G++ A +E L G P+ +Y+ L N + L
Sbjct: 249 RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 308
Query: 531 AYNLFRKI 538
A ++FR +
Sbjct: 309 ALSIFRHL 316
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 144/307 (46%), Gaps = 34/307 (11%)
Query: 159 VAKDVKSYNVIVKALGR-------RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
+A ++ YN +V L + RK FD M ++G+ PD T S ++D + ++
Sbjct: 391 IAPNIFIYNALVDGLCKSGDIQRARKLFD-------GMPEKGLEPDSVTYSTMIDGYCKS 443
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYN 271
V +A + + G++ + N ++ C+ + A +LF M K +++N
Sbjct: 444 ENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFN 503
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I G+ K ++ E ++ +E++A+ PD +T++ +I+ +AG++++A +F M+E+
Sbjct: 504 TLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQER 563
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
N ++ D ++ M + +P+ TY +I K + +A
Sbjct: 564 ---------NLIV---------DTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEA 605
Query: 392 LEVFEEMLDRGIVPSTGTITSFL-EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
++ +E++ +G++ + GTI L LC A + + ++G K SL A L+R
Sbjct: 606 FKLRDEVVGKGML-TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVR 664
Query: 451 RLSGFGK 457
GK
Sbjct: 665 SFHEAGK 671
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 100/236 (42%), Gaps = 19/236 (8%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S+N ++ + + +M + + PD T + V+D +AG++ +A + +
Sbjct: 501 SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEM 560
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
++ + L V +LF M K V + +TY +VI K +
Sbjct: 561 QE------------------RNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNL 602
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
VE ++ E+V +G LI L + + +A ++ D M E G P A + +
Sbjct: 603 VEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTL 662
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
+ ++ G DE + ++G+ S P+ T L++G L DA + ++++
Sbjct: 663 VRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718
>gi|255661028|gb|ACU25683.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 376
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 170/348 (48%), Gaps = 2/348 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V +MA+ ++PD + +++ F +AG++ + + G + + S N ++ L
Sbjct: 12 VYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGSR-NVASFNTMMRGLF 70
Query: 245 QRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
V S++ MK + + TY I++ G+ K G + VL+ EG + D+
Sbjct: 71 NNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAKQEGGALDAF 130
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
+S +I GL + G++D A+ V + M E GC P+T YNA+I+ + F++ ++ +K +
Sbjct: 131 AYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFKEL 190
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ +C P + TY LI+GL K + A+A ++ +EML++G PS T + ++ LC
Sbjct: 191 GTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKV 250
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+ ++ + G K + + +L+ L GK +L+ +M + Y +
Sbjct: 251 EMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNTL 310
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
+ G G NA+++ LR G P + Y+ L A N++ A
Sbjct: 311 MEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLKGLCACNRISVA 358
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 147/360 (40%), Gaps = 34/360 (9%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
W + +++V S+N +++ L D + ++ M + G D T I++ F +
Sbjct: 48 WELMGREGSRNVASFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKN 107
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYN 271
G K++ +L + G DA Y+
Sbjct: 108 GYNNKSLHVLEIAKQEGGALDA----------------------------------FAYS 133
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+ISG K+G++ + VL ++ G P++ ++ LI GL A + +DAI VF + +
Sbjct: 134 AMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDAIRVFKELGTR 193
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
C P YN +I+ F E K M P++ TY+ LI GL + KV A
Sbjct: 194 HCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKGLCQDHKVEMA 253
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
L+++ +++ +G P + LCS G A +Y C +L Y L+
Sbjct: 254 LQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPNLVTYNTLMEG 313
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
G L +W + +G D Y + GLC ++ A+L + +++ K P+
Sbjct: 314 FYKGGDTRNALVIWARILRNGLLPDIISYNITLKGLCACNRISVAILFLNDAVTKNIVPT 373
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 128/327 (39%), Gaps = 69/327 (21%)
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI---------------------- 318
G + ERV KE+ SPD++ ++ ++ G +AGRI
Sbjct: 4 GAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGSRNVASFN 63
Query: 319 ------------DDAIEVFDTMKEKGCGPDTNAYNAVISNY------------------- 347
D+ +++ MKE G D+ Y ++ +
Sbjct: 64 TMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIAKQE 123
Query: 348 ----------------ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
+G D+ + GM C+PN Y LI+GLL + K DA
Sbjct: 124 GGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKFEDA 183
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+ VF+E+ R P+ T + + LC A + K+ + G S+ Y LL++
Sbjct: 184 IRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLLIKG 243
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L K M L LW+++ G+ D +++ +I GLC++G+ E+A + + P+
Sbjct: 244 LCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNCAPN 303
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y+ L +A ++ +I
Sbjct: 304 LVTYNTLMEGFYKGGDTRNALVIWARI 330
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 104/225 (46%), Gaps = 1/225 (0%)
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+G I+ A V+ M E PD YNA+++ + G C ++ M N+
Sbjct: 2 ESGAINAAERVYKEMAESKISPDAVVYNAMLNGFFKAGRIKNCFDLWELMGREGSR-NVA 60
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
++ ++ GL + +V + ++E M + G V + T + C G + ++ + + A
Sbjct: 61 SFNTMMRGLFNNGEVDEVFSIWELMKESGFVEDSTTYGILVHGFCKNGYNNKSLHVLEIA 120
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
++ G L AY ++ L GK + + + M ESG + ++Y +I GL +
Sbjct: 121 KQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKF 180
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
E+A+ V +E + P+ + Y+ L N L + AY+L +++
Sbjct: 181 EDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEM 225
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 115/256 (44%), Gaps = 1/256 (0%)
Query: 155 KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV 214
K A D +Y+ ++ L + D +VL+ M + G P+ + + +++ + A +
Sbjct: 121 KQEGGALDAFAYSAMISGLCKMGKLDKAVSVLNGMIESGCKPNTQVYNALINGLLGASKF 180
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIV 273
AI++ L + N ++ LC+ A L M K +V+TY+++
Sbjct: 181 EDAIRVFKELGTRHCSPTIVTYNTLINGLCKGERFAEAYDLVKEMLEKGWNPSVITYSLL 240
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
I G + +V ++ +++++GF PD + LI GL G+ + A E++ M C
Sbjct: 241 IKGLCQDHKVEMALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTEHASELYFDMNHWNC 300
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
P+ YN ++ + GD + + + P++ +Y + GL +++ A+
Sbjct: 301 APNLVTYNTLMEGFYKGGDTRNALVIWARILRNGLLPDIISYNITLKGLCACNRISVAIL 360
Query: 394 VFEEMLDRGIVPSTGT 409
+ + + IVP+ T
Sbjct: 361 FLNDAVTKNIVPTVIT 376
>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 823
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 173/370 (46%), Gaps = 16/370 (4%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SY +++A + K +D +L +A+ G PD+ T I++ + +G + A+ M +L
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL 441
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
D G+ DA N+++ LC+ A LF+ M + +L + Y +I G+ + G
Sbjct: 442 IDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDF 501
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E +V V +G D + + +I+G R+G +D+A+ + M E+ PD Y+ +
Sbjct: 502 DEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTI 561
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I Y+ D +K ++ M C+PN+ TYT LI+G + A E F+EM R +
Sbjct: 562 IDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDL 621
Query: 404 VPSTGTITSFLEPLCSYGPP-HAAMMMYKKARKVGCKLSLTAYKLLL----RRLSG---- 454
VP+ T T+ + A+ ++ C + + LL ++ SG
Sbjct: 622 VPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLG 681
Query: 455 ------FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
G+ + + +H M+ G+ G Y V+ LC G ++ A ++ + ++KGF
Sbjct: 682 EPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGF 741
Query: 509 CPSRLVYSKL 518
P + ++ +
Sbjct: 742 SPDPVSFAAI 751
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 155/359 (43%), Gaps = 7/359 (1%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V ++ +G P LET +++ F + G + ++L +++ GL+ LN ++
Sbjct: 262 VFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKY 321
Query: 245 QR-LHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ V A S+ + ++ TYNI+I+ K G+ +L E +G +L
Sbjct: 322 RHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNL 381
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
+++ LI+ ++ D A ++ + E+GC PD Y +I + G D+ + +
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL 441
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
P+ Y L+SGL K+ + A +F EMLDR I+P + ++ G
Sbjct: 442 IDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDF 501
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIY 480
A ++ + + G K+ + + +++ GF + GML L + M E D Y
Sbjct: 502 DEARKVFTLSVEKGVKVDVVHHNAMIK---GFCRSGMLDEALACMNRMNEEHLVPDKFTY 558
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I G + A+ + + + P+ + Y+ L N A F++++
Sbjct: 559 STIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQ 617
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 85/461 (18%), Positives = 169/461 (36%), Gaps = 110/461 (23%)
Query: 170 VKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGL 229
+K L R + F+ + +VL ++ E V E LS V+ ++ +G + KA+++ + +
Sbjct: 106 LKLLARHRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGFLSKAVEIYDYVVE--- 162
Query: 230 KFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERV 289
L++S+ +V+ N ++S K ++ + +V
Sbjct: 163 -------------------------LYDSVP-----DVIACNALLSLVVKSRRLEDARKV 192
Query: 290 LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYIS 349
E+ G D+ + +++G+ G++++ ++ + KGC P+ YN +I Y
Sbjct: 193 YDEMCERGGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCK 252
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI------ 403
+GD + +K + P ++T+ +I+G K + + EE+ +RG+
Sbjct: 253 LGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWF 312
Query: 404 -----------------------------VPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
P T + LC G A + +A
Sbjct: 313 LNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEAS 372
Query: 435 KV-----------------------------------GCKLSLTAYKLLLRRLSGFGKCG 459
K GCK + Y +L+ L G
Sbjct: 373 KKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMD 432
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+++ ++ + G D IY +++GLC G+ A L+ E L + P VY+ L
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLI 492
Query: 520 NKLLASNKLESAYNLFR-------KIKIARQNDYARRLWRS 553
+ + S + A +F K+ + N + RS
Sbjct: 493 DGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRS 533
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/280 (19%), Positives = 117/280 (41%), Gaps = 16/280 (5%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
++ D Y ++ R FD V + ++GV D+ + ++ F R+G + +A
Sbjct: 480 SILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEA 539
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG 276
+ + R+ + L D + + ++ ++ + A +F M K K NV+TY +I+G
Sbjct: 540 LACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLING 599
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR-AGRIDDAIEVFDTMKEKGCGP 335
+ G E KE+ + P+ +T++ LI + + ++ A+ ++ M C P
Sbjct: 600 FCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVP 659
Query: 336 DTNAYNAVISNYIS------VGDFDE--------CMKYYKGMSSYNCEPNMDTYTRLISG 381
+ +N ++ ++ +G+ D +++ M S + Y ++
Sbjct: 660 NEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVC 719
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
L V A + + M+ +G P + + L C G
Sbjct: 720 LCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFCVVG 759
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/299 (19%), Positives = 115/299 (38%), Gaps = 59/299 (19%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V DV +N ++K R D ++ M +E + PD T S ++D +++ + AI
Sbjct: 516 VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAI 575
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
++ +E K + + ++ C + A F M+ + L NV+TY +I +
Sbjct: 576 KIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSF 635
Query: 278 SKLGQVVEMERVLKEIV-AEGFSPDSLTFSFLIEGL-----GR----------------- 314
+K +E E++ P+ +TF+ L++G GR
Sbjct: 636 AKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFF 695
Query: 315 ---------------------------AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
G + A + D M +KG PD ++ A++ +
Sbjct: 696 EFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGF 755
Query: 348 ISVGDFDECMKYYKGMSSYNC-EPNMDT---YTRLISGLLKSRKVADALEVFEEMLDRG 402
VG+ K ++ M N E ++ Y+R++ L + +A + M+++
Sbjct: 756 CVVGN----SKQWRNMDFRNLDEKGLEVAVRYSRVLEQHLPKAVICEASTILHAMVEKA 810
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 190/386 (49%), Gaps = 1/386 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ ++ DV +YN ++ G+ + + ++ ++M G PD+ T + +++ + + +
Sbjct: 315 MREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEK 374
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNI 272
+ +A + +++ GLK + + + ++ C+ + A LF M+ +L N TY
Sbjct: 375 MPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTS 434
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I K G + E ++L +++ G + +T++ L++GL +AGR+ +A EVF +M + G
Sbjct: 435 LIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 494
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ Y A++ YI ++ MK K M+ N +P++ Y +I G RK+ +
Sbjct: 495 ISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETK 554
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+ EEM RGI + T+ ++ G A+ +++ + VG + ++ Y +L+ L
Sbjct: 555 LILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGL 614
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G + +D + M G + +Y +I GLC +E+A + +E +G P
Sbjct: 615 CKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDI 674
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKI 538
++ L + L L+ A L ++
Sbjct: 675 TAFTALIDGNLKHGNLQEALVLISRM 700
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 182/414 (43%), Gaps = 24/414 (5%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFD-------------------FMCNVLSDM 189
FF WA +SY +IV + R + + +CN+ DM
Sbjct: 149 FFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIF-DM 207
Query: 190 AKEGVNPDLE---TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
N + ++ F+ G + +A + R+ +F A S N +L L +
Sbjct: 208 LWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKS 267
Query: 247 LHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
+ FN M G + +V TYN++I K G + R+ ++ G SPD +T+
Sbjct: 268 GNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTY 327
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LI+G G+ G +++ +F+ MK+ GC PD YN +I+ Y +Y+ M +
Sbjct: 328 NSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKN 387
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
+PN+ TY+ LI K + A+++F +M G++P+ T TS ++ C G
Sbjct: 388 NGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTE 447
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A + + G KL++ Y LL L G+ +++ M + G + ++Y ++
Sbjct: 448 AWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVH 507
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G ++E+A+ ++++ P ++Y + + KLE + ++K
Sbjct: 508 GYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMK 561
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/471 (23%), Positives = 201/471 (42%), Gaps = 46/471 (9%)
Query: 100 ERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNV 159
E R +F+Q ++ G+ D V + +D GKV G+L E + FN +K
Sbjct: 306 ENSRRLFVQ-MREMGLSPDV---VTYNSLIDGYGKV---GSL--EEVASLFN-EMKDVGC 355
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
D+ +YN ++ + + S+M G+ P++ T S ++D+F + G + AI+
Sbjct: 356 VPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIK 415
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWS 278
+ + GL + + ++ C+ ++ A L N M + V N++TY ++ G
Sbjct: 416 LFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLC 475
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G+++E E V + ++ +G SP+ ++ L+ G +A R++DA+++ M E PD
Sbjct: 476 KAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLI 535
Query: 339 AY------------------------------NAVISN-----YISVGDFDECMKYYKGM 363
Y N VIS Y G + + +++ M
Sbjct: 536 LYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEM 595
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
E + TY LI GL K+ V A++ F ML G+ P+ TS ++ LC
Sbjct: 596 QDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCI 655
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
+A ++ + + G +TA+ L+ G L L M E D +Y +
Sbjct: 656 ESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSL 715
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
++G G+L A E + KG P ++ L + +L+ A L
Sbjct: 716 VSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIEL 766
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 124/289 (42%), Gaps = 36/289 (12%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V M K+G++P+ + + ++ +I+A ++ A+++L ++ + +K D ++W C
Sbjct: 486 VFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHC 545
Query: 245 QRLHVGAASSLFNSMKGK------------------------------------VLFNVM 268
+ + + MK + V ++
Sbjct: 546 SQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIV 605
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TY ++I G K G V +++ G P+ ++ LI+GL + I+ A ++FD M
Sbjct: 606 TYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEM 665
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ +G PD A+ A+I + G+ E + M+ E ++ YT L+SG + ++
Sbjct: 666 QCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGEL 725
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
A + F EM+++GI+P L G A+ + + ++G
Sbjct: 726 HQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMG 774
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 114/254 (44%), Gaps = 1/254 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N+ D+ Y I+ ++ + +L +M G++ + + ++D++ +AG+ A
Sbjct: 529 NIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDA 588
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISG 276
+ ++D G++ + V++ LC+ V A F M L NV Y +I G
Sbjct: 589 LNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDG 648
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K + +++ E+ G +PD F+ LI+G + G + +A+ + M E D
Sbjct: 649 LCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFD 708
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+ Y +++S + G+ + K++ M P L+ K ++ +A+E+
Sbjct: 709 LHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKN 768
Query: 397 EMLDRGIVPSTGTI 410
EM G++ + T+
Sbjct: 769 EMERMGLITESATM 782
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 174/382 (45%), Gaps = 1/382 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
V+ +V +YN++++ D M K+G P++ T + ++D + + ++
Sbjct: 200 QVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG 276
++L + GL+ + S NVV+ LC+ + S + M K + +TYN +I G
Sbjct: 260 FELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKG 319
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K G + + E++ G SP +T++ LI + +AG ++ A E D M+ +G P+
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPN 379
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y ++ + G +E + K M P++ TY LI+G + K+ DA+ V E
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLE 439
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+M ++G+ P + ++ L C A+ + +K G K Y L++
Sbjct: 440 DMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQR 499
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ DL+ EM G P D Y +I C G L+ A+ + E + KG P + YS
Sbjct: 500 RTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYS 559
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
L N L + A L K+
Sbjct: 560 VLINGLNKQARTREAKRLLLKL 581
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 170/377 (45%), Gaps = 35/377 (9%)
Query: 163 VKSYNVIVKALGR-RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
V SYN ++ A R ++ F NV +M + V+P++ T +I++ F AG + A++
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFF 228
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLG 281
R+E G L NV+TYN +I G+ KL
Sbjct: 229 DRMEKKG----------------------------------CLPNVVTYNTLIDGYCKLR 254
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ + +L+ + +G P+ ++++ +I GL R GR+ + V M ++G D YN
Sbjct: 255 KIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYN 314
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I Y G+F + + + M + P++ TYT LI + K+ + A E ++M R
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVR 374
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G+ P+ T T+ ++ G + A + K+ G S+ Y L+ GK
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDA 434
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+ + +M+E G D Y V++G C ++ A+ V + + KG P + YS L
Sbjct: 435 IAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQG 494
Query: 522 LLASNKLESAYNLFRKI 538
+ + A +LF ++
Sbjct: 495 FCEQRRTKEACDLFDEM 511
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 164/354 (46%), Gaps = 27/354 (7%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ V +Y ++ ++ + + L M G+ P+ T + ++D F + G + +A
Sbjct: 341 LSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
++L + D G + N ++ C + A ++ MK K L +V++Y+ V+SG+
Sbjct: 401 RVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGF 460
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ V E RV +++VA+G PD++T+S LI+G R +A ++FD M G PD
Sbjct: 461 CRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDE 520
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y A+I+ Y GD + ++ + M P++ TY+ LI+GL K + +A + +
Sbjct: 521 FTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLK 580
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ VPS T + +E S +K ++ + GF
Sbjct: 581 LFYEESVPSDVTYHTLIE-----------------------NCSNIEFKSVVSLIKGFCM 617
Query: 458 CGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
GM+ + ++ M E + DG Y +I G C G + A + +E ++ GF
Sbjct: 618 KGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGF 671
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 129/274 (47%), Gaps = 1/274 (0%)
Query: 267 VMTYNIVISGWSKLGQVVEM-ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
V++YN V+ + + + E V KE++ SP+ T++ LI G AG +D A+ F
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFF 228
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M++KGC P+ YN +I Y + D+ + + M+ EPN+ +Y +I+GL +
Sbjct: 229 DRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCRE 288
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
++ + V EM RG T + ++ C G H A++M+ + + G S+ Y
Sbjct: 289 GRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITY 348
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ + G + +M+ G + Y ++ G G + A V++E +
Sbjct: 349 TSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMID 408
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
GF PS + Y+ L N + K+ A + +K
Sbjct: 409 NGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMK 442
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 190/440 (43%), Gaps = 23/440 (5%)
Query: 120 LWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFF 179
L +++ + + + ++ + + E ++ F WA +P+ ++ + + L R K +
Sbjct: 39 LHHLSANFTPEAASNLLLKSQNNQELILKFLTWA--NPHQFFTLRCKCITLHILTRFKLY 96
Query: 180 DFMCNVLSDMAKEGVNPDLETL-------------------SIVMDSFIRAGQVYKAIQM 220
+ D+A + ++ + +L +V+ S+ R + KA+ +
Sbjct: 97 KTAQTLAEDVAAKTLDDEDASLVFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSI 156
Query: 221 LGRLEDFGLKFDAESLNVVL-WCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWS 278
+ + G S N VL + + ++ A ++F M + +V NV TYNI+I G+
Sbjct: 157 VHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFC 216
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
G + R + +G P+ +T++ LI+G + +IDD E+ +M KG P+
Sbjct: 217 LAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLI 276
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
+YN VI+ G E M+ + TY LI G K AL + EM
Sbjct: 277 SYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
L G+ PS T TS + +C G + A + R G + Y L+ S G
Sbjct: 337 LRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+ EM ++G+ Y +I G C G++ +A+ V+E+ KG P + YS +
Sbjct: 397 NEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTV 456
Query: 519 SNKLLASNKLESAYNLFRKI 538
+ S ++ A + RK+
Sbjct: 457 LSGFCRSYDVDEALRVKRKM 476
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 112/262 (42%), Gaps = 16/262 (6%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K + DV SY+ ++ R D V M +G+ PD T S ++ F +
Sbjct: 441 MKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRR 500
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
+A + + GL D + ++ C + A L N M K VL +V+TY++
Sbjct: 501 TKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSV 560
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE---------------GLGRAGR 317
+I+G +K + E +R+L ++ E P +T+ LIE G G
Sbjct: 561 LINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGM 620
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
+ +A +VF++M EK PD AYN +I + GD + YK M + T
Sbjct: 621 MTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIA 680
Query: 378 LISGLLKSRKVADALEVFEEML 399
L+ L K KV + V +L
Sbjct: 681 LVKTLHKEGKVNELNSVIANVL 702
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 1/240 (0%)
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI-SVGDFDECMKYY 360
S F +++ R ID A+ + + G P +YNAV+ I S + +
Sbjct: 134 SSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
K M PN+ TY LI G + + AL F+ M +G +P+ T + ++ C
Sbjct: 194 KEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKL 253
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
+ + G + +L +Y +++ L G+ + + EM + GY D Y
Sbjct: 254 RKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTY 313
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+I G C G A+++ E LR G PS + Y+ L + + + + A ++++
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRV 373
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 177/385 (45%), Gaps = 3/385 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K +++++ ++ L R F+ + M +G+ P T + +++ G+
Sbjct: 333 MKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGR 392
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
A + + G ++ N ++ C C + A +F+ M K NV+TYN
Sbjct: 393 FETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNT 452
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G+ K G + R+L+ + G PD+ T++ LI G R G+++ A +F M E G
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ Y A+I Y ++ D+ + + M P+ TY +ISG K+ +++A
Sbjct: 513 ISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+M+ +G++P+ T TSF++ LC G A ++ + K +L Y L+ L
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGL 632
Query: 453 SGFGKC--GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
G+ + +L + G + + Y ++ GLC G+ A ++ +KG P
Sbjct: 633 CQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQP 692
Query: 511 SRLVYSKLSNKLLASNKLESAYNLF 535
S +Y L + K+ESA N+F
Sbjct: 693 SEEIYRALLIGECKNLKVESALNIF 717
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 172/377 (45%), Gaps = 3/377 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ L F+ + M G P +T + ++ F G + KA+ + ++
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQV 283
G + + N +++ C++ ++ A L MKG L + TY +ISG+S+ G++
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ ++ G SP+ +T++ +I+G ++DDA+ +F M E G P + YN +
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS + E + M PN+ TYT I GL ++ + A ++F EM R
Sbjct: 559 ISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY 618
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKAR--KVGCKLSLTAYKLLLRRLSGFGKCGML 461
P+ T +S + LC G A M AR GC+ ++ Y L++ L G G+C
Sbjct: 619 FPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEA 678
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L MQ+ G EIY ++ G C ++E+A+ + GF Y L
Sbjct: 679 DQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICA 738
Query: 522 LLASNKLESAYNLFRKI 538
L N +E A +F+ +
Sbjct: 739 LCKENFIEEAQCIFQTM 755
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 174/375 (46%), Gaps = 1/375 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S+ ++ LG+ D ++ M G+ P L T + +++ + G+V +A ++ +
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ +A + ++ C+ ++ A ++F+ M K N +TY+ +I+G G++
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E +L+E+V +G P T++ + L AG +A+E+ MK++GC P+ + A+
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTAL 348
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS G F+ + Y M + P TY LI+ L + A +F+ ML G
Sbjct: 349 ISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS 408
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+PST T ++ C G AM+++ K K G ++ Y L+ G +
Sbjct: 409 LPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMR 468
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L M+ +G D Y +I+G G+LE+A + + G P+ + Y+ + +
Sbjct: 469 LLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYF 528
Query: 524 ASNKLESAYNLFRKI 538
K++ A LF K+
Sbjct: 529 NLAKVDDALALFWKM 543
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 162/376 (43%), Gaps = 1/376 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y ++ R D + M K+G +P+ T S +++ G++ +A+ ML +
Sbjct: 239 TYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEM 298
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
G++ + + L LC A L MK + + N+ T+ +ISG S+ G+
Sbjct: 299 VQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKF 358
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ +++A+G P ++T++ LI L GR + A +F M G P T YN +
Sbjct: 359 EIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEI 418
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I + +GD + M + M PN+ TY LI G K + +A+ + E M G+
Sbjct: 419 IKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGL 478
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P T T + G A ++ + G + Y ++ K L
Sbjct: 479 KPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALA 538
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L+ +M ESG + Y +I+G + A + +++G P+ + Y+ + L
Sbjct: 539 LFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLC 598
Query: 524 ASNKLESAYNLFRKIK 539
+ + A+ +F +++
Sbjct: 599 RNGRTGLAFKIFHEME 614
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 173/376 (46%), Gaps = 11/376 (2%)
Query: 173 LGRRKFF--DFMC--NVLSDMAKEGVNPDLETLSIVMDSFIR-AGQVYKAIQMLGRLE-- 225
+ RRKFF D C ++L+ + ++ + + + I+M R G+V + Q L +
Sbjct: 101 ISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSK 160
Query: 226 -DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
DFG + S +L L + V A ++ M + +++T+N +I+ K G+V
Sbjct: 161 YDFG--YTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRV 218
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E + ++ I P++ T++ LI G R +D A +FD M + GC P++ Y+ +
Sbjct: 219 QEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTL 278
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I+ S G +E M + M EP + TYT + L + ++A+E+ +M RG
Sbjct: 279 INGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGC 338
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
VP+ T T+ + L G A+ +Y K G + Y L+ +L G+
Sbjct: 339 VPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFT 398
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
++ M G + Y +I C +G ++ A+++ ++ L+ G P+ + Y+ L
Sbjct: 399 IFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYC 458
Query: 524 ASNKLESAYNLFRKIK 539
L +A L +K
Sbjct: 459 KQGNLNNAMRLLEIMK 474
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 165/356 (46%), Gaps = 9/356 (2%)
Query: 144 EAMVLFFNW--AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
+AMV+F A PNV +YN ++ ++ + +L M G+ PD T
Sbjct: 430 KAMVIFDKMLKAGSSPNVI----TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTY 485
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-K 260
+ ++ F R G++ A + + + G+ + + ++ V A +LF M +
Sbjct: 486 TELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVE 545
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
L + TYN++ISG+SK + E E ++V +G P+ +T++ I+GL R GR
Sbjct: 546 SGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGL 605
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY--YKGMSSYNCEPNMDTYTRL 378
A ++F M+++ P+ Y+++I G ++ Y ++ Y CEPN+DTYT L
Sbjct: 606 AFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTL 665
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
+ GL + +A ++ M +G+ PS + L C +A+ ++ +G
Sbjct: 666 VKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGF 725
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
+L L+ YK L+ L ++ M E + SD + ++ GL G+ +
Sbjct: 726 QLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETD 781
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 42/274 (15%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF W + ++YNV++ + N M K+G+ P++ T +
Sbjct: 535 DALALF--WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTS 592
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
+D R G+ A ++ +E + + + +++ LCQ A ++N +
Sbjct: 593 FIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAE-MYNLLARLT 651
Query: 264 LF----NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP------------------- 300
+ NV TY ++ G G+ E ++++ + +G P
Sbjct: 652 HYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVE 711
Query: 301 ---------DSLTFSF-------LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
D+L F LI L + I++A +F TM EK D A+ ++
Sbjct: 712 SALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLL 771
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
+ G+ D C+K M S NC N TY L
Sbjct: 772 DGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 201/441 (45%), Gaps = 26/441 (5%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
L+ + G + DA+ V +L G V L E +++ A DV
Sbjct: 196 ALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLM---------GCAADVN 246
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+++ +V+ + ++ M +G P + T ++ R Q +A MLGR+
Sbjct: 247 TFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRV 306
Query: 225 EDFGLKFDAESLNVVLW------CLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+ LNVVL+ CL + + A+ L+ +M K + TY+I++ G
Sbjct: 307 PE---------LNVVLFNTVIGGCLAEG-KLAEATELYETMGLKGCQPDAHTYSILMHGL 356
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
KLG++ R+L+E+ +GF+P+ +T++ ++ + G DD + + M KG ++
Sbjct: 357 CKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I G DE M + M S C P++ +Y +I L + ++ +A +FE
Sbjct: 417 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN 476
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+L+ G+V + T + + L G A+ + K+ GC L + +Y L++ + G
Sbjct: 477 LLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGN 536
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L L EM E G + Y +I+ LC ++ +A+ + ++ L +G P + Y+
Sbjct: 537 VDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNT 596
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L N L + +A NL K+
Sbjct: 597 LINGLCKMGWMHAALNLLEKL 617
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 159/328 (48%), Gaps = 4/328 (1%)
Query: 123 VNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFM 182
+NV L V+G + G L+ EA L+ +K D +Y++++ L +
Sbjct: 309 LNVVLFNTVIGGCLAEGKLA-EATELYETMGLK--GCQPDAHTYSILMHGLCKLGRIGSA 365
Query: 183 CNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWC 242
+L +M K+G P++ T +IV+ SF + G +L + GL +++ N +++
Sbjct: 366 VRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYA 425
Query: 243 LCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
LC+ + A L M+ + ++ +YN +I Q+ E E + + ++ EG +
Sbjct: 426 LCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVAN 485
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+T++ +I L R GR DA+ + M GC D +YN +I G+ D + +
Sbjct: 486 GITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLE 545
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M+ +PN +Y LIS L K R+V DALE+ ++ML++G+ P T + + LC G
Sbjct: 546 EMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMG 605
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLL 449
HAA+ + +K + Y +L+
Sbjct: 606 WMHAALNLLEKLHNENVHPDIITYNILI 633
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 142/327 (43%), Gaps = 7/327 (2%)
Query: 216 KAIQMLGRL-EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNI 272
+A+ +L +L FG++ S NVVL L + A +L+ M + +V T+ +
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+LG+ E +L+ + G PD++ + +I L G + +A + + M G
Sbjct: 181 AARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
C D N ++ V+ +G E + M + C P + TY L+ GL + R+ +A
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+ + + +V I L + G A +Y+ GC+ Y +L+ L
Sbjct: 301 AMLGRVPELNVVLFNTVIGGCL----AEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G+ G + L EM++ G+ + Y V+ C G ++ ++EE KG +
Sbjct: 357 CKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKIK 539
Y+ + L +++ A L ++++
Sbjct: 417 QGYNGMIYALCKDGRMDEAMGLIQEMR 443
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 98/229 (42%), Gaps = 25/229 (10%)
Query: 35 SYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVDE 94
SYN ++ + N + H+ + L + +++ ++ N + + D+ R E
Sbjct: 453 SYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITY-NTIIHALLRDGRWQDAVRLAKE 511
Query: 95 FLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAI 154
+L G L + G+I+ + NVD SL ++ ++ +G I
Sbjct: 512 MIL-----HGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG--------------I 552
Query: 155 KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV 214
K NV SYN+++ L + + + M +G+ PD+ T + +++ + G +
Sbjct: 553 KPNNV-----SYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWM 607
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
+ A+ +L +L + + D + N+++ C+ + A+ L N V
Sbjct: 608 HAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAV 656
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 193/378 (51%), Gaps = 2/378 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +YN I+ LG+++ + + +M ++ V P++ T +I++D R G++ A+++
Sbjct: 370 VIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRD 428
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLG 281
+E GL + ++N+++ LC+ + A S+F M KV N +T++ +I G K G
Sbjct: 429 DMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCG 488
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+V + + ++++ G P ++ ++ LI + GR +D +++ M GC PD N
Sbjct: 489 RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLIN 548
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+ G+ ++ ++ ++++ P+ +Y+ LI GL+K+ + E+F M ++
Sbjct: 549 TYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQ 608
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G V T + ++ C G + A + ++ + G ++ Y ++ L+ +
Sbjct: 609 GCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEA 668
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+ E + +G + +Y +I G +G+++ A L+MEE ++KG P+ ++ L +
Sbjct: 669 YMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 728
Query: 522 LLASNKLESAYNLFRKIK 539
L+ + ++ A F+ +K
Sbjct: 729 LVKAEEINEALICFQSMK 746
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 195/454 (42%), Gaps = 38/454 (8%)
Query: 121 WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFD 180
+ VNV L ++ G + +L +K ++ D+ YNV + G+ D
Sbjct: 226 YEVNVHLFTTLIRVFAREGRVDAALSLL---DEMKSNSLDADIVLYNVCIDCFGKAGKVD 282
Query: 181 FMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED-------------- 226
+M G+ PD T + ++ +A ++ +A+++ +LE
Sbjct: 283 MSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMI 342
Query: 227 --FGL--KFDAE-----------------SLNVVLWCLCQRLHVGAASSLFNSMKGKVLF 265
+G KFD + N +L CL ++ V A +F MK +
Sbjct: 343 MGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVP 402
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
NV TYNI+I + G++ + ++ G P+ LT + +I+ L +A ++++A +F
Sbjct: 403 NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIF 462
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ M +K C P+ ++++I G D+ Y+ M P YT LI K
Sbjct: 463 EGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKC 522
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+ D ++++EM+ G P I ++++ + G ++++ G +Y
Sbjct: 523 GRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSY 582
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+L+ L G +L++ M+E G D Y VI G C G++ A ++EE
Sbjct: 583 SILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKV 642
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
KG P+ + Y + + L ++L+ AY LF + K
Sbjct: 643 KGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 676
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 199/434 (45%), Gaps = 11/434 (2%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
F ++K G++ D D++ + V+ + N EA+ LF ++ +
Sbjct: 287 FFHEMKSHGLMPD-------DVTYTSMIGVLCKANRLDEAVELF--EQLEQNRKVPCAYA 337
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN ++ G FD +L +G P + + ++ + +V +A+++ ++
Sbjct: 338 YNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK 397
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVV 284
+ + + N+++ LC+ + AA + + M+ LF NV+T NI+I K ++
Sbjct: 398 RDAVP-NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLE 456
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E + + + + +P+++TFS LI+GLG+ GR+DDA +++ M + G P Y ++I
Sbjct: 457 EACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLI 516
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
++ G ++ K YK M C P++ + + K+ + +F E+ G +
Sbjct: 517 RSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFI 576
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P + + + L G + ++ ++ GC L AY ++ GK L
Sbjct: 577 PDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQL 636
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
EM+ G+P Y VI GL I +L+ A ++ EE+ G + +VYS L +
Sbjct: 637 LEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGK 696
Query: 525 SNKLESAYNLFRKI 538
+++ AY + ++
Sbjct: 697 VGRIDEAYLIMEEL 710
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/469 (21%), Positives = 206/469 (43%), Gaps = 47/469 (10%)
Query: 115 VIEDALWNVNVDLSLDVVGK---------VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
++E W ++ SL +G+ V+ R + A V +F WA K ++
Sbjct: 69 ILESGPWGPTLENSLSALGEKPLPELVIGVLKRLKDANTA-VNYFQWAEKQTEKVHCPEA 127
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD-----------------------LETL- 201
YN ++ + R FD + +L +M+ G P ++T+
Sbjct: 128 YNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMR 187
Query: 202 -----------SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+I++ + + + + ++++ G + + ++ + V
Sbjct: 188 KFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVD 247
Query: 251 AASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
AA SL + MK L +++ YN+ I + K G+V + E+ + G PD +T++ +I
Sbjct: 248 AALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMI 307
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
L +A R+D+A+E+F+ +++ P AYN +I Y S G FDE + +
Sbjct: 308 GVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSI 367
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P++ Y +++ L K R+V +AL +FEEM R VP+ T ++ LC G +AA+ +
Sbjct: 368 PSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEI 426
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ G ++ +++ RL K ++ M + + + +I GL
Sbjct: 427 RDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGK 486
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G++++A + E+ L G P +VY+ L + E + +++++
Sbjct: 487 CGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEM 535
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/462 (22%), Positives = 195/462 (42%), Gaps = 71/462 (15%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ +V +YN+++ L R + + DM + G+ P++ T++I++D +A ++ +A
Sbjct: 399 DAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEA 458
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------KGKVLFNVMTYN 271
+ ++D +A + + ++ L + V A SL+ M G +++ + +
Sbjct: 459 CSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRS 518
Query: 272 ----------------IVISGWS--------------KLGQVVEMERVLKEIVAEGFSPD 301
+V +G S K G+ + + +EI A GF PD
Sbjct: 519 FFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPD 578
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+ ++S LI GL +AG ++ E+F MKE+GC DT+AYNAVI + G ++ + +
Sbjct: 579 ARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLE 638
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE------------------------ 397
M P + TY +I GL K ++ +A +FEE
Sbjct: 639 EMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVG 698
Query: 398 -----------MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
++ +G+ P+ T L+ L + A++ ++ + + C + Y
Sbjct: 699 RIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYS 758
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
+L+ L K W EMQ+ G + Y +I+GL G + A +
Sbjct: 759 ILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKAN 818
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYAR 548
G P Y+ + L ++NK AY LF + ++ N + +
Sbjct: 819 GGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTK 860
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 148/292 (50%), Gaps = 1/292 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +SY++++ L + + + M ++G D + V+D F ++G+V KA Q+L
Sbjct: 578 DARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLL 637
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++ G + V+ L + + A LF K + NV+ Y+ +I G+ K+
Sbjct: 638 EEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKV 697
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ E +++E++ +G +P+ T++ L++ L +A I++A+ F +MK+ C P+ Y
Sbjct: 698 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITY 757
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +I+ V F++ +++ M +PN TYT +ISGL K+ + +A +F
Sbjct: 758 SILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKA 817
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
G +P + + + +E L S A ++++ R GC + +LL L
Sbjct: 818 NGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDAL 869
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 108/237 (45%), Gaps = 4/237 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HP V +Y ++ L + D + + G+ ++ S ++D F + G++
Sbjct: 645 HPPT---VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRID 701
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVI 274
+A ++ L GL + + N +L L + + A F SMK K N +TY+I+I
Sbjct: 702 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILI 761
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G ++ + + +E+ G P+++T++ +I GL +AG I +A +F K G
Sbjct: 762 NGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGI 821
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
PD+ +YNA+I S + ++ C + T L+ L K+ + A
Sbjct: 822 PDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 878
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 92/236 (38%)
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
++ L+ + R D + + M G GP +N +++N + E + M
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ P YT LI L + R+ L +F +M + G + T+ + G
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
AA+ + + + + Y + + GK M +HEM+ G D Y +
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSM 306
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I LC +L+ AV + E+ + P Y+ + ++ K + AY L + K
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQK 362
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 94/205 (45%)
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
AYN+++ +FD + + MS P+ + L++ +KSRK+ +A ++ + M
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
P+ T + L P ++++ + +++G ++++ + L+R + G+
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
L L EM+ + +D +Y I G+++ + E G P + Y+ +
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSM 306
Query: 519 SNKLLASNKLESAYNLFRKIKIARQ 543
L +N+L+ A LF +++ R+
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRK 331
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 174/367 (47%), Gaps = 8/367 (2%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY- 215
P DV++Y ++ AL R ++ + +++ ++GV P + T ++V+D + R G+ +
Sbjct: 174 PGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWP 233
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
+ + +L + G++ D + + V+ + + A + F +K + + V+TYN ++
Sbjct: 234 RIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALL 293
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+ K G E RVLKE+ G PD++T++ L RAG ++A + DTM KG
Sbjct: 294 QVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLL 353
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+T YN V++ Y +VG DE + + M PN++TY + L K + LE+
Sbjct: 354 PNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEM 413
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
EEM G P+ T + L G + + G +LS Y L +S
Sbjct: 414 LEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTL---ISA 470
Query: 455 FGKCG---MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
+G+CG ++ EM SG+ Y ++ L G A ++ + L+ GF P+
Sbjct: 471 YGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPN 530
Query: 512 RLVYSKL 518
YS L
Sbjct: 531 DQSYSLL 537
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ A GR + + +M G P L T + +++ R G A ++ ++
Sbjct: 463 TYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKM 522
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN--VMTYNIVISGWSKLGQ 282
G K + +S +++L C + + S+ + +F V+ +VI+ + K +
Sbjct: 523 LKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANF-KCRR 581
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ +E+ +E+ A+G+ PD + F+ ++ + G A E+FD++K+ G PD YN+
Sbjct: 582 LEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNS 641
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
++ Y + E K K + S +P++ +Y +I+G K + +A + EM+ G
Sbjct: 642 LMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADG 701
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+ P T + + +A++ M+ +AR+V
Sbjct: 702 MAPCVVTYHTLVG-------GYASLEMFNEAREV 728
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 121/274 (44%), Gaps = 36/274 (13%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV-------- 214
+ +YN ++ L R+ + +++S M K G P+ ++ S+++ + + G
Sbjct: 496 LTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEK 555
Query: 215 ---------------------YKAIQMLGRLEDF------GLKFDAESLNVVLWCLCQRL 247
+K ++ G + F G K D N +L +
Sbjct: 556 EVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNG 615
Query: 248 HVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
A+ +F+S+K L +++TYN ++ ++K + E E++LK++ + PD ++++
Sbjct: 616 LYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYN 675
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
+I G + G I +A + M G P Y+ ++ Y S+ F+E + M +
Sbjct: 676 TVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHH 735
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +P TY R++ K+++ +A E E+ D
Sbjct: 736 NLKPMELTYRRVVDSYCKAKRYDEAREFLSEISD 769
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 89/211 (42%), Gaps = 34/211 (16%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K D+ +N ++ + + + + + G++PDL T + +MD + ++ +
Sbjct: 592 VKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNE 651
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
++A ++L +L+ +K D S N V
Sbjct: 652 SWEAEKILKQLKSSQVKPDVVSYNT----------------------------------V 677
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
I+G+ K G + E +R+L E++A+G +P +T+ L+ G ++A EV + M
Sbjct: 678 INGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNL 737
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
P Y V+ +Y +DE ++ +S
Sbjct: 738 KPMELTYRRVVDSYCKAKRYDEAREFLSEIS 768
>gi|326504802|dbj|BAK06692.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 199/448 (44%), Gaps = 28/448 (6%)
Query: 107 LQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVA--KDVK 164
LQ L G GV LS ++ +++ R + + + N HP+V+ +
Sbjct: 66 LQLLSGGGV----------SLSQGLLVQILLRLRGASKLALSLLNAVRLHPSVSSPPNAD 115
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y+ +V ALGR FD ++ + A +G T +++ ++ AG +A++ +
Sbjct: 116 AYDAVVDALGRAHQFDAAWRLVVEAAADGAATP-RTFAVLARRYVAAGLTRQAVRAFDDM 174
Query: 225 EDF-GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQV 283
E F G + DA+ +L LC+ + A +FN K K N Y I+I GW K+ +
Sbjct: 175 EAFLGREPDAQEFTTLLDTLCKYKYPKVAVEVFNKRKYKYEPNEKMYTILIYGWCKVNRS 234
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG----------RIDDAIEVFDTMKEKGC 333
++ LK+++ G P+ +T++ L+ G+ R ++ A + M ++G
Sbjct: 235 DMAQKFLKDMIDHGIEPNIVTYNILLNGICRHASLHPDNRFDRTVNAAENLLKEMNDRGI 294
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
PD +Y+ ++ Y + C+ ++ M P + TYT +I L ++ DA
Sbjct: 295 EPDVTSYSIILHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDAES 354
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS---LTAYKLLLR 450
+ EM+ G+ PS T F + A+ +Y K K C + + +Y +LL
Sbjct: 355 LLGEMVSEGVCPSPATYNCFFKEYRGRKDVSGALELYNKM-KAPCSPTAPDIHSYNILLG 413
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
+ +++LW++M E D + Y ++ G C + A E + KGF P
Sbjct: 414 MFIKLDRHETVMELWNDMCERAVGPDLDSYTLLVHGFCAKEKWREACQFFMEMIEKGFLP 473
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKI 538
++ + L+ ++ L + L +++
Sbjct: 474 QKITFETPYRGLIQADMLRTWRRLKKRV 501
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 118/285 (41%), Gaps = 13/285 (4%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N Y+ V+ + Q R++ E A+G + TF+ L AG A+ F
Sbjct: 113 NADAYDAVVDALGRAHQFDAAWRLVVEAAADG-AATPRTFAVLARRYVAAGLTRQAVRAF 171
Query: 326 DTMKE-KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
D M+ G PD + ++ ++ + Y EPN YT LI G K
Sbjct: 172 DDMEAFLGREPDAQEFTTLLDTLCKYKYPKVAVEVFNK-RKYKYEPNEKMYTILIYGWCK 230
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH----------AAMMMYKKAR 434
+ A + ++M+D GI P+ T L +C + H AA + K+
Sbjct: 231 VNRSDMAQKFLKDMIDHGIEPNIVTYNILLNGICRHASLHPDNRFDRTVNAAENLLKEMN 290
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G + +T+Y ++L S K + L ++ M++ G Y VI L + G+LE
Sbjct: 291 DRGIEPDVTSYSIILHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLE 350
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+A ++ E + +G CPS Y+ + + A L+ K+K
Sbjct: 351 DAESLLGEMVSEGVCPSPATYNCFFKEYRGRKDVSGALELYNKMK 395
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 176/378 (46%), Gaps = 1/378 (0%)
Query: 130 DVVGKVVNRGNLSGEAMVLFFNWAIKHP-NVAKDVKSYNVIVKALGRRKFFDFMCNVLSD 188
++V V+ R G + FF++ H D S+++ + R + +++
Sbjct: 55 NLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHIHPTVWSLIHR 114
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + P +T +IV + + +G+ KA+++ + + G D S N +L LC+
Sbjct: 115 MRSLRIGPSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 174
Query: 249 VGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
V A LF +++G+ + +TYN++++GW + + + VLKE+V G +P+ T++ +
Sbjct: 175 VEKAYELFRALRGRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTM 234
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
++G RAG+I A E F MK++ C D Y V+ + G+ + M
Sbjct: 235 LQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGV 294
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P++ TY I L K V +A+ +FEEM+ +G P+ T + L G
Sbjct: 295 LPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEE 354
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ ++ GC+ + Y +++R S + L L+ +M + + Y +I+G+
Sbjct: 355 LMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGTGDCLPNLDTYNILISGMF 414
Query: 489 NIGQLENAVLVMEESLRK 506
+ E+ V+ ++ K
Sbjct: 415 VRKRSEDMVVAGNQAFAK 432
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 113/243 (46%), Gaps = 7/243 (2%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P TF+ + E +G+ D A+++F M E GC D ++N ++ ++ +
Sbjct: 122 PSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 181
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
++ + + TY +++G ++ ALEV +EM+DRGI P+ T + L+
Sbjct: 182 FRALRG-RFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFR 240
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSD 476
G A + + +K C++ + Y ++ GFG G + +++ EM G
Sbjct: 241 AGQIRQAWEFFLEMKKRNCEIDVVTYTTVVH---GFGVAGEIKRTRNVFDEMIREGVLPS 297
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
Y I LC +ENAV++ EE +RKG+ P+ Y+ L L + K L +
Sbjct: 298 VATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQ 357
Query: 537 KIK 539
+++
Sbjct: 358 RME 360
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 177/385 (45%), Gaps = 3/385 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K +++++ ++ L R F+ + M +G+ P T + +++ G+
Sbjct: 333 MKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGR 392
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
A + + G ++ N ++ C C + A +F+ M K NV+TYN
Sbjct: 393 FETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNT 452
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G+ K G + R+L+ + G PD+ T++ LI G R G+++ A +F M E G
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ Y A+I Y ++ D+ + + M P+ TY +ISG K+ +++A
Sbjct: 513 ISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+M+ +G++P+ T TSF++ LC G A ++ + K +L Y L+ L
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGL 632
Query: 453 SGFGKC--GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
G+ + +L + G + + Y ++ GLC G+ A ++ +KG P
Sbjct: 633 CQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQP 692
Query: 511 SRLVYSKLSNKLLASNKLESAYNLF 535
S +Y L + K+ESA N+F
Sbjct: 693 SEEIYRALLIGECKNLKVESALNIF 717
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 172/377 (45%), Gaps = 3/377 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ L F+ + M G P +T + ++ F G + KA+ + ++
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQV 283
G + + N +++ C++ ++ A L MKG L + TY +ISG+S+ G++
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ ++ G SP+ +T++ +I+G ++DDA+ +F M E G P + YN +
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS + E + M PN+ TYT I GL ++ + A ++F EM R
Sbjct: 559 ISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY 618
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKAR--KVGCKLSLTAYKLLLRRLSGFGKCGML 461
P+ T +S + LC G A M AR GC+ ++ Y L++ L G G+C
Sbjct: 619 FPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEA 678
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L MQ+ G EIY ++ G C ++E+A+ + GF Y L
Sbjct: 679 DQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICA 738
Query: 522 LLASNKLESAYNLFRKI 538
L N +E A +F+ +
Sbjct: 739 LCKENFIEEAQCIFQTM 755
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 174/375 (46%), Gaps = 1/375 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S+ ++ LG+ D ++ M G+ P L T + +++ + G+V +A ++ +
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ +A + ++ C+ ++ A ++F+ M K N +TY+ +I+G G++
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E +L+E+V +G P T++ + L AG +A+E+ MK++GC P+ + A+
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTAL 348
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS G F+ + Y M + P TY LI+ L + A +F+ ML G
Sbjct: 349 ISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS 408
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+PST T ++ C G AM+++ K K G ++ Y L+ G +
Sbjct: 409 LPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMR 468
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L M+ +G D Y +I+G G+LE+A + + G P+ + Y+ + +
Sbjct: 469 LLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYF 528
Query: 524 ASNKLESAYNLFRKI 538
K++ A LF K+
Sbjct: 529 NLAKVDDALALFWKM 543
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 162/376 (43%), Gaps = 1/376 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y ++ R D + M K+G +P+ T S +++ G++ +A+ ML +
Sbjct: 239 TYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEM 298
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
G++ + + L LC A L MK + + N+ T+ +ISG S+ G+
Sbjct: 299 VQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKF 358
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ +++A+G P ++T++ LI L GR + A +F M G P T YN +
Sbjct: 359 EIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEI 418
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I + +GD + M + M PN+ TY LI G K + +A+ + E M G+
Sbjct: 419 IKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGL 478
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P T T + G A ++ + G + Y ++ K L
Sbjct: 479 KPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALA 538
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L+ +M ESG + Y +I+G + A + +++G P+ + Y+ + L
Sbjct: 539 LFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLC 598
Query: 524 ASNKLESAYNLFRKIK 539
+ + A+ +F +++
Sbjct: 599 RNGRTGLAFKIFHEME 614
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 173/376 (46%), Gaps = 11/376 (2%)
Query: 173 LGRRKFF--DFMC--NVLSDMAKEGVNPDLETLSIVMDSFIR-AGQVYKAIQMLGRLE-- 225
+ RRKFF D C ++L+ + ++ + + + I+M R G+V + Q L +
Sbjct: 101 ISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSK 160
Query: 226 -DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
DFG + S +L L + V A ++ M + +++T+N +I+ K G+V
Sbjct: 161 YDFG--YTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRV 218
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E + ++ I P++ T++ LI G R +D A +FD M + GC P++ Y+ +
Sbjct: 219 QEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTL 278
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I+ S G +E M + M EP + TYT + L + ++A+E+ +M RG
Sbjct: 279 INGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGC 338
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
VP+ T T+ + L G A+ +Y K G + Y L+ +L G+
Sbjct: 339 VPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFT 398
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
++ M G + Y +I C +G ++ A+++ ++ L+ G P+ + Y+ L
Sbjct: 399 IFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYC 458
Query: 524 ASNKLESAYNLFRKIK 539
L +A L +K
Sbjct: 459 KQGNLNNAMRLLEIMK 474
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 166/356 (46%), Gaps = 9/356 (2%)
Query: 144 EAMVLFFNW--AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
+AMV+F A PNV +YN ++ ++ + +L M G+ PD T
Sbjct: 430 KAMVIFDKMLKAGSSPNVI----TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTY 485
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-K 260
+ ++ F R G++ A + + + G+ + + ++ V A +LF M +
Sbjct: 486 TELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVE 545
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
L + TYN++ISG+SK + E E ++V +G P+ +T++ I+GL R GR
Sbjct: 546 SGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGL 605
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY--YKGMSSYNCEPNMDTYTRL 378
A ++F M+++ P+ Y+++I G ++ Y ++ Y CEPN+DTYT L
Sbjct: 606 AFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTL 665
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
+ GL + +A ++ M +G+ PS + L C +A+ ++ +G
Sbjct: 666 VKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGF 725
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
+L L+ YK L+ L ++ M E + SD ++ ++ GL G+ +
Sbjct: 726 QLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETD 781
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 106/274 (38%), Gaps = 42/274 (15%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF W + ++YNV++ + N M K+G+ P++ T +
Sbjct: 535 DALALF--WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTS 592
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
+D R G+ A ++ +E + + + +++ LCQ A ++N +
Sbjct: 593 FIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAE-MYNLLARLT 651
Query: 264 LF----NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP------------------- 300
+ NV TY ++ G G+ E ++++ + +G P
Sbjct: 652 HYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVE 711
Query: 301 ---------DSLTFSF-------LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
D+L F LI L + I++A +F TM EK D + ++
Sbjct: 712 SALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLL 771
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
+ G+ D C+K M S NC N TY L
Sbjct: 772 DGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805
>gi|15228825|ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22670, mitochondrial; Flags: Precursor
gi|9279685|dbj|BAB01242.1| unnamed protein product [Arabidopsis thaliana]
gi|332643142|gb|AEE76663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 562
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 181/391 (46%), Gaps = 10/391 (2%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAK--EGVNPDLETLSIVMD 206
FF WA +YN +V LG+ + FD M ++++M K E L+T+S VM
Sbjct: 152 FFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMR 211
Query: 207 SFIRAGQVYKAIQMLGRLE-DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF 265
++G+ KA+ +E +G+K D ++N ++ L + + A +F + +
Sbjct: 212 RLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKP 271
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+ T+NI+I G+ K + + ++ + F+PD +T++ +E + G E+
Sbjct: 272 DARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEML 331
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ M+E GC P+ Y V+ + E + Y+ M C P+ Y+ LI L K+
Sbjct: 332 EEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKT 391
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV---GCKLSL 442
+ DA E+FE+M ++G+ + + + A+ + K+ C ++
Sbjct: 392 GRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNV 451
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y LL+ K +L L H M ++ D Y +I GLC G++E A L EE
Sbjct: 452 ETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEE 511
Query: 503 SLRKGFCP----SRLVYSKLSNKLLASNKLE 529
++RKG P +++ +L K +A KL+
Sbjct: 512 AVRKGMVPRDSTCKMLVDELEKKNMAEAKLK 542
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 110/237 (46%), Gaps = 2/237 (0%)
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTM-KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
T S ++ L ++G+ + A++ F M K G DT A N+++ + + + +
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK 264
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
+ +P+ T+ LI G K+RK DA + + M P T TSF+E C G
Sbjct: 265 LFD-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGD 323
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
M ++ R+ GC ++ Y +++ L + L ++ +M+E G D + Y
Sbjct: 324 FRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSS 383
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I L G+ ++A + E+ +G LVY+ + + L ++ E A L ++++
Sbjct: 384 LIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRME 440
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 174/367 (47%), Gaps = 8/367 (2%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY- 215
P DV++Y ++ AL R ++ + +++ ++GV P + T ++V+D + R G+ +
Sbjct: 174 PGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWP 233
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
+ + +L + G++ D + + V+ + + A + F +K + + V+TYN ++
Sbjct: 234 RIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALL 293
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+ K G E RVLKE+ G PD++T++ L RAG ++A + DTM KG
Sbjct: 294 QVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLL 353
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+T YN V++ Y +VG DE + + M PN++TY + L K + LE+
Sbjct: 354 PNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEM 413
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
EEM G P+ T + L G + + G +LS Y L +S
Sbjct: 414 LEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTL---ISA 470
Query: 455 FGKCG---MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
+G+CG ++ EM SG+ Y ++ L G A ++ + L+ GF P+
Sbjct: 471 YGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPN 530
Query: 512 RLVYSKL 518
YS L
Sbjct: 531 DQSYSLL 537
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ A GR + + +M G P L T + +++ R G A ++ ++
Sbjct: 463 TYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKM 522
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN--VMTYNIVISGWSKLGQ 282
G K + +S +++L C + + S+ + +F V+ +VI+ + K +
Sbjct: 523 LKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANF-KCRR 581
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ +E+ +E+ A+G+ PD + F+ ++ + G A E+FD++K+ G PD YN+
Sbjct: 582 LEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNS 641
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
++ Y + E K K + S +P++ +Y +I+G K + +A + EM+ G
Sbjct: 642 LMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADG 701
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+ P T + + +A++ M+ +AR+V
Sbjct: 702 MAPCVVTYHTLVG-------GYASLEMFNEAREV 728
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 121/274 (44%), Gaps = 36/274 (13%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV-------- 214
+ +YN ++ L R+ + +++S M K G P+ ++ S+++ + + G
Sbjct: 496 LTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEK 555
Query: 215 ---------------------YKAIQMLGRLEDF------GLKFDAESLNVVLWCLCQRL 247
+K ++ G + F G K D N +L +
Sbjct: 556 EVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNG 615
Query: 248 HVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
A+ +F+S+K L +++TYN ++ ++K + E E++LK++ + PD ++++
Sbjct: 616 LYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYN 675
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
+I G + G I +A + M G P Y+ ++ Y S+ F+E + M +
Sbjct: 676 TVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHH 735
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +P TY R++ K+++ +A E E+ D
Sbjct: 736 NLKPMELTYRRVVDSYCKAKRYDEAREFLSEISD 769
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 89/211 (42%), Gaps = 34/211 (16%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K D+ +N ++ + + + + + G++PDL T + +MD + ++ +
Sbjct: 592 VKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNE 651
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
++A ++L +L+ +K D S N V
Sbjct: 652 SWEAEKILKQLKSSQVKPDVVSYNT----------------------------------V 677
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
I+G+ K G + E +R+L E++A+G +P +T+ L+ G ++A EV + M
Sbjct: 678 INGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNL 737
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
P Y V+ +Y +DE ++ +S
Sbjct: 738 KPMELTYRRVVDSYCKAKRYDEAREFLSEIS 768
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 178/366 (48%), Gaps = 1/366 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +V +++V++ L + F +V+ DM G +P + T + ++D + +AG+++KA
Sbjct: 225 IGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKAD 284
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+L + + + + N+++ C+ +V AA +F M+ + L NV+TYN +I+G
Sbjct: 285 ALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGL 344
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
G++ E + ++ G P+ +T++ LI G + + +A E+ D + ++G P+
Sbjct: 345 CSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNV 404
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+N +I Y G D+ M PN+ TY LI G + V +A ++ +E
Sbjct: 405 ITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKE 464
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M G+ T ++ LC G A+ + + +VG S Y L+ G
Sbjct: 465 MEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGN 524
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L++ M++ G ++ Y +I G CN G+LE A ++ E L KG P+R Y
Sbjct: 525 STAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDI 584
Query: 518 LSNKLL 523
L ++++
Sbjct: 585 LRDEMM 590
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 195/444 (43%), Gaps = 53/444 (11%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG------VNPD 197
+ ++ +F W K +V+ + ++ L K ++ + +L AK +
Sbjct: 88 DLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHS 147
Query: 198 LETL-------SIVMD----SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
L L SI++D ++++ G++ A++ R D+G + A S N +L L +
Sbjct: 148 LSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKE 207
Query: 247 LHVGAASSLFNSMKGK----------VLFN--------------------------VMTY 270
+G S++ M + V+ N V+TY
Sbjct: 208 GRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITY 267
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
N +I G+ K G++ + + +LKE+VA+ P+ +TF+ LI+G R + A +VF+ M+
Sbjct: 268 NTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQR 327
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
+G P+ YN++I+ S G DE + MS +PN+ TY LI+G K + + +
Sbjct: 328 QGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKE 387
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A E+ +++ RG+ P+ T + ++ G A ++ G +++ Y L+
Sbjct: 388 AREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIV 447
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
G L EM+ +G +D Y ++ LC G+ AV +++E G P
Sbjct: 448 GFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNP 507
Query: 511 SRLVYSKLSNKLLASNKLESAYNL 534
S L Y+ L + +A N+
Sbjct: 508 SHLTYNALIDGYFREGNSTAALNV 531
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 122/250 (48%), Gaps = 21/250 (8%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV +YN ++ ++K +L D+ K G+ P++ T + ++D++ +AG++
Sbjct: 367 PNVV----TYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDD 422
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVIS 275
A + + D G+ + + N ++ C+ +V A L M+G L +++TYNI++
Sbjct: 423 AFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVD 482
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
K G+ + R+L E+ G +P LT++ LI+G R G A+ V M++KG
Sbjct: 483 ALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRA 542
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+ YN +I + + G +E + M L GL+ +R D L
Sbjct: 543 NIVTYNVLIKGFCNKGKLEEANRLLNEM--------------LEKGLIPNRTTYDILR-- 586
Query: 396 EEMLDRGIVP 405
+EM+++G +P
Sbjct: 587 DEMMEKGFIP 596
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 13/194 (6%)
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
+++ FD Y +S+ +C P ++ L+K ++ V++EM+ R I +
Sbjct: 177 LALEGFDRAGDYGFRLSALSCNP-------MLVSLVKEGRIGVVESVYKEMIRRRIGVNV 229
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---L 464
T + LC G A + + + G S+ Y + + G+ K G + L
Sbjct: 230 VTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTI---IDGYCKAGKMFKADAL 286
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
EM + + +I G C + A V EE R+G P+ + Y+ L N L +
Sbjct: 287 LKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCS 346
Query: 525 SNKLESAYNLFRKI 538
+ KL+ A L K+
Sbjct: 347 NGKLDEALGLQDKM 360
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 57/117 (48%)
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ + +A G +LS + +L L G+ G++ ++ EM + ++ VI
Sbjct: 178 ALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVIN 237
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
GLC +G+ + A V+E+ GF PS + Y+ + + + K+ A L +++ R
Sbjct: 238 GLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKR 294
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA--RK 435
L+ +K+ ++ ALE F+ D G S + L L G +YK+ R+
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR 224
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
+G +++ + +++ L GK D+ +M+ G+ Y +I G C G++
Sbjct: 225 IG--VNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFK 282
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
A +++E + K P+ + ++ L + + +A +F +++
Sbjct: 283 ADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 174/367 (47%), Gaps = 8/367 (2%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY- 215
P DV++Y ++ AL R ++ + +++ ++GV P + T ++V+D + R G+ +
Sbjct: 83 PGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWP 142
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
+ + +L + G++ D + + V+ + + A + F +K + + V+TYN ++
Sbjct: 143 RIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALL 202
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+ K G E RVLKE+ G PD++T++ L RAG ++A + DTM KG
Sbjct: 203 QVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLL 262
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+T YN V++ Y +VG DE + + M PN++TY + L K + LE+
Sbjct: 263 PNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEM 322
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
EEM G P+ T + L G + + G +LS Y L +S
Sbjct: 323 LEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTL---ISA 379
Query: 455 FGKCG---MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
+G+CG ++ EM SG+ Y ++ L G A ++ + L+ GF P+
Sbjct: 380 YGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPN 439
Query: 512 RLVYSKL 518
YS L
Sbjct: 440 DQSYSLL 446
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 132/274 (48%), Gaps = 10/274 (3%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ A GR + + +M G P L T + +++ R G A ++ ++
Sbjct: 372 TYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKM 431
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN--VMTYNIVISGWSKLGQ 282
G K + +S +++L C + + S+ + +F V+ +VI+ + K +
Sbjct: 432 LKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANF-KCRR 490
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ +E+ +E+ A+G+ PD + F+ ++ + G A E+FD++K+ G PD YN+
Sbjct: 491 LEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNS 550
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
++ Y + E K K + S +P++ +Y +I+G K + +A + EM+ G
Sbjct: 551 LMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADG 610
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+ P T + + +A++ M+ +AR+V
Sbjct: 611 MAPCVVTYHTLVG-------GYASLEMFNEAREV 637
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 121/274 (44%), Gaps = 36/274 (13%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV-------- 214
+ +YN ++ L R+ + +++S M K G P+ ++ S+++ + + G
Sbjct: 405 LTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEK 464
Query: 215 ---------------------YKAIQMLGRLEDF------GLKFDAESLNVVLWCLCQRL 247
+K ++ G + F G K D N +L +
Sbjct: 465 EVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNG 524
Query: 248 HVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
A+ +F+S+K L +++TYN ++ ++K + E E++LK++ + PD ++++
Sbjct: 525 LYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYN 584
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
+I G + G I +A + M G P Y+ ++ Y S+ F+E + M +
Sbjct: 585 TVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHH 644
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +P TY R++ K+++ +A E E+ D
Sbjct: 645 NLKPMELTYRRVVDSYCKAKRYDEAREFLSEISD 678
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 89/211 (42%), Gaps = 34/211 (16%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K D+ +N ++ + + + + + G++PDL T + +MD + ++ +
Sbjct: 501 VKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNE 560
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
++A ++L +L+ +K D S N V
Sbjct: 561 SWEAEKILKQLKSSQVKPDVVSYNT----------------------------------V 586
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
I+G+ K G + E +R+L E++A+G +P +T+ L+ G ++A EV + M
Sbjct: 587 INGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNL 646
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
P Y V+ +Y +DE ++ +S
Sbjct: 647 KPMELTYRRVVDSYCKAKRYDEAREFLSEIS 677
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 163/309 (52%), Gaps = 6/309 (1%)
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLK 291
A + N ++ LC+ A L M + ++ TY +I+G+ K + + RV +
Sbjct: 54 AVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFE 113
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG-CGPDTNAYNAVISNYISV 350
++VA GF PD +T+S LI+GL + GR+ +AI++F M + G C P+T YN++IS + +
Sbjct: 114 QLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRM 173
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
G DE M + M+ P++ TYT L++G K ++ DA ++ +M +G+ P+ T
Sbjct: 174 GKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTF 233
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM-Q 469
TS ++ LC A+ + + R+ C ++ Y +L G+ + L + M +
Sbjct: 234 TSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL---DGYCRVNQLEEARKFMLE 290
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
E P + + +I GLC + + A+ ++EE+ R+ P ++Y+ + + L K++
Sbjct: 291 EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVD 350
Query: 530 SAYNLFRKI 538
A ++RK+
Sbjct: 351 EACRVYRKM 359
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 135/273 (49%), Gaps = 4/273 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y ++ + K D V + G PD+ T S ++D + G++ +AI +
Sbjct: 88 DIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLF 147
Query: 222 GRLEDFG-LKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSK 279
GR+ G + + N ++ C+ + A +L M + +V+TY +++G+ K
Sbjct: 148 GRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCK 207
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
L ++ + +L ++ +G +P+ +TF+ L++GL R R+ DA+ + M+ K C P
Sbjct: 208 LARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYT 267
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YN ++ Y V +E K+ + +C PN+ ++ +I GL K + ++A+E+ EE
Sbjct: 268 YNTILDGYCRVNQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEAR 325
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
R P T+ ++ LC A +Y+K
Sbjct: 326 RRRCNPDVVMYTTVIDVLCREKKVDEACRVYRK 358
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 113/233 (48%), Gaps = 1/233 (0%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P ++T++ LI GL +A R +A ++ + M GC PD Y +I+ + D+ ++
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG-IVPSTGTITSFLEPLC 418
++ + + P++ TY+ LI GL K ++ +A+++F M+ G +P+T T S + C
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
G AM + ++ + G + Y L+ + DL ++M G +
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
+ ++ GLC +L +AV ++ E RK P+ Y+ + + N+LE A
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEA 284
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 107/230 (46%), Gaps = 4/230 (1%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F IK + + +YN ++ R D N+L MA+ G +PD+ T + +M+ F
Sbjct: 146 LFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGF 205
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NV 267
+ ++ A +L ++ GL + + ++ LC+ + A + M+ K V
Sbjct: 206 CKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTV 265
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
TYN ++ G+ ++ Q+ E + + E + P+ ++F+ +I GL + R +A+E+ +
Sbjct: 266 YTYNTILDGYCRVNQLEEARKFMLEEM--DCPPNVVSFNIMIRGLCKVNRSSEAMELVEE 323
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDE-CMKYYKGMSSYNCEPNMDTYT 376
+ + C PD Y VI DE C Y K + C PN TY+
Sbjct: 324 ARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYS 373
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 36/170 (21%)
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P TY LISGL K+ + ++A ++ EEM+ G +P T T+ + C A
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDA--- 108
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
L ++ ++ G+ D Y +I GLC
Sbjct: 109 --------------------------------LRVFEQLVARGFRPDVVTYSCLIDGLCK 136
Query: 490 IGQLENAVLVMEESLRKGFC-PSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G+L+ A+ + ++ G C P+ + Y+ L + K++ A NL ++
Sbjct: 137 EGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERM 186
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 182/364 (50%), Gaps = 8/364 (2%)
Query: 135 VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
V+ + N G A+ +F A +A V+ YN ++ R F+ + + + M + G
Sbjct: 239 VLGKANQEGIAVEIF---AKAESVIADTVQVYNAMMGVYARNGNFEKVNEMFNLMRERGC 295
Query: 195 NPDLETLSIVMDSFIRAGQVYK--AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
PD+ + + ++++ +++ AI++L + FGL+ D + N ++ + ++ A
Sbjct: 296 EPDIVSFNTLINAKVKSCATVSGLAIELLDEVGKFGLRPDIITYNTLISACSRESNLKEA 355
Query: 253 SSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
+F+ M+ + ++ TYN +IS + + G ++ E + +++ + GFSPD++T++ L+
Sbjct: 356 IGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYA 415
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
+ G + ++ + M + G G D YN +I Y G DE ++ Y+ M S P+
Sbjct: 416 FSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPD 475
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
TYT LI L K+ K+ +A +V EMLD G+ P+ T ++ + G A +
Sbjct: 476 AVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFN 535
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC--N 489
+ R+ G K AY ++L F + L+ EM E+G+ D +YE ++ L N
Sbjct: 536 RMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLPALVREN 595
Query: 490 IGQL 493
+G +
Sbjct: 596 MGDV 599
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 175/413 (42%), Gaps = 38/413 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +YN ++ A R V S M PDL T + ++ + R G KA +
Sbjct: 335 DIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLF 394
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--NVMTYNIVISGWSK 279
+L+ G DA + N +L+ + + + M K+ F + MTYN +I + K
Sbjct: 395 EKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMV-KMGFGKDEMTYNTIIHMYGK 453
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G+ E R+ +++ + G +PD++T++ LI+ LG+A +I++A +V M + G P +
Sbjct: 454 HGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHT 513
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y+A+I Y VG E + + M + + Y+ ++ L+ ++ A +++EM+
Sbjct: 514 YSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMI 573
Query: 400 DRGIVPSTGTITSFLEPLC-------------------SYGP-------------PHAAM 427
+ G P TG L L S P H A
Sbjct: 574 EAGFTPDTGLYEVMLPALVRENMGDVIERVVQDTKELGSMNPHDISSVLVKGGCYDHGAK 633
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE-IYEYVIAG 486
M+ K A G +L + ++ S + +L +E P D + I E +I
Sbjct: 634 ML-KVAISNGYELDREIFLSIMSSYSSSARYSEACELVEFFREHA-PDDIQMITEALIII 691
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
LC G+L+ A+ G S +Y L ++ S + + A LF ++
Sbjct: 692 LCKAGKLDAALEEYRSRGGLGTFRSCTMYESLIHECTKSEQFDIASQLFSDMR 744
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 160/393 (40%), Gaps = 37/393 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D K +N ++ A ++ + + M +EG +P +E+++ ++ + I G++ + ++
Sbjct: 823 DRKVWNALIHAYAFSGCYERARAIFNTMMREGPSPTVESVNGLLQALIVDGRLSELYVVI 882
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMT-YNIVISGWSKL 280
L+D LK S+ ++L Q ++ ++N MK F M Y ++I +
Sbjct: 883 QELQDMDLKISKSSILLMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRF 942
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+V ++ +L E+ GF PD F+ +++ + ++ +++ G PD Y
Sbjct: 943 KRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETY 1002
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM-- 398
N +I+ Y +E + M S EP DTY +I+ K + A E+FEE+
Sbjct: 1003 NTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRS 1062
Query: 399 ----LDR-----------------------------GIVPSTGTITSFLEPLCSYGPPHA 425
LDR GI P+T T+ + G P
Sbjct: 1063 NGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQPEE 1122
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A + K R +G L Y ++ G ++ EM+E+ D I+ I
Sbjct: 1123 ADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAGIEKLTEMKEAAIEPDHRIWTCFIR 1182
Query: 486 GLCNIGQLENAVLVMEESLRKGF-CPSRLVYSK 517
G++ +A ++ GF P RL+ K
Sbjct: 1183 AASLSGEVNDANNLLNALQAVGFDLPIRLLGEK 1215
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 131/319 (41%), Gaps = 7/319 (2%)
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
S+ S+ RA ++Y+ + M +A + +L L + G A +F +
Sbjct: 204 SVGQSSWQRALELYECLTM-----QQWYATNARMVATILSVLGKANQEGIAVEIFAKAES 258
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD- 320
+ V YN ++ +++ G ++ + + G PD ++F+ LI ++
Sbjct: 259 VIADTVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSG 318
Query: 321 -AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
AIE+ D + + G PD YN +IS + E + + M S C+P++ TY +I
Sbjct: 319 LAIELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMI 378
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
S + A +FE++ G P T S L G + ++ K+G
Sbjct: 379 SVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFG 438
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
Y ++ G+ L L+ +M+ SG D Y +I L ++E A V
Sbjct: 439 KDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKV 498
Query: 500 MEESLRKGFCPSRLVYSKL 518
M E L G P+ YS L
Sbjct: 499 MSEMLDAGVKPTLHTYSAL 517
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 137/344 (39%), Gaps = 10/344 (2%)
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
++ ++ +A Q A+++ + E + + N ++ + + + +FN M+
Sbjct: 233 VATILSVLGKANQEGIAVEIFAKAESV-IADTVQVYNAMMGVYARNGNFEKVNEMFNLMR 291
Query: 261 GK------VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
+ V FN + V S + G +E+ L E+ G PD +T++ LI R
Sbjct: 292 ERGCEPDIVSFNTLINAKVKSCATVSGLAIEL---LDEVGKFGLRPDIITYNTLISACSR 348
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
+ +AI VF M+ C PD YNA+IS Y G + ++ + S P+ T
Sbjct: 349 ESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVT 408
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y L+ K ++ EEM+ G T + + +G A+ +Y+ +
Sbjct: 409 YNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMK 468
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G Y +L+ L K + EM ++G Y +I +G+
Sbjct: 469 SSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRV 528
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
A G L YS + + L N+++ A L++++
Sbjct: 529 EAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEM 572
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 173/406 (42%), Gaps = 24/406 (5%)
Query: 95 FLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAI 154
F L E L +KLK G DA+ ++ + G ++S E + + F
Sbjct: 386 FALKAEHL----FEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGF---- 437
Query: 155 KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV 214
KD +YN I+ G+ D + DM G NPD T ++++D +A ++
Sbjct: 438 -----GKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKI 492
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG---AASSLFNSMK-GKVLFNVMTY 270
+A +++ + D G+K +L+ +C VG A FN M+ + + + Y
Sbjct: 493 EEASKVMSEMLDAGVK---PTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAY 549
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
++++ + + ++ + + +E++ GF+PD+ + ++ L R D V KE
Sbjct: 550 SVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLPALVRENMGDVIERVVQDTKE 609
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
G N ++ + S + G +D K K S E + + + ++S S + ++
Sbjct: 610 LG---SMNPHD-ISSVLVKGGCYDHGAKMLKVAISNGYELDREIFLSIMSSYSSSARYSE 665
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A E+ E + + + LC G AA+ Y+ +G S T Y+ L+
Sbjct: 666 ACELVEFFREHAPDDIQMITEALIIILCKAGKLDAALEEYRSRGGLGTFRSCTMYESLIH 725
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
+ + + L+ +M+ +G +Y+ +++ C IG E A
Sbjct: 726 ECTKSEQFDIASQLFSDMRFNGVEPSECLYQSMVSVYCRIGFPETA 771
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 132/294 (44%), Gaps = 15/294 (5%)
Query: 262 KVLFNVMTYNIVIS--GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
+VLF + V+ G S + +E+ L + + ++ ++ + ++ LG+A +
Sbjct: 190 RVLFTPTDFCFVVKSVGQSSWQRALELYECL--TMQQWYATNARMVATILSVLGKANQEG 247
Query: 320 DAIEVFDTMKEKGCGPDT-NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
A+E+F K + DT YNA++ Y G+F++ + + M CEP++ ++ L
Sbjct: 248 IAVEIF--AKAESVIADTVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTL 305
Query: 379 ISGLLKSRKVAD--ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
I+ +KS A+E+ +E+ G+ P T + + A+ ++
Sbjct: 306 INAKVKSCATVSGLAIELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESN 365
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLL---DLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
C+ L Y ++ S +G+CG L L+ +++ +G+ D Y ++ G
Sbjct: 366 RCQPDLWTYNAMI---SVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNT 422
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYA 547
E + EE ++ GF + Y+ + + + + A L+R +K + +N A
Sbjct: 423 EKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDA 476
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/387 (19%), Positives = 143/387 (36%), Gaps = 19/387 (4%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y ++ + + FD + SDM GV P ++ + R G A +L E
Sbjct: 720 YESLIHECTKSEQFDIASQLFSDMRFNGVEPSECLYQSMVSVYCRIGFPETAQHLLYHAE 779
Query: 226 DFGLKFDAESLNVV----------LWCLCQRLHVGAASSLFNSMKGKV-LFNVMTYNIVI 274
+ D +++++ +W +A S+ +++ + + +N +I
Sbjct: 780 KNDIILDNVTVHIIDIIETYGKLKMW--------QSAESIVENLRQRCSKMDRKVWNALI 831
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
++ G + ++ EG SP + + L++ L GR+ + V +++
Sbjct: 832 HAYAFSGCYERARAIFNTMMREGPSPTVESVNGLLQALIVDGRLSELYVVIQELQDMDLK 891
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
++ ++ + G+ E K Y GM + P M Y +I L + ++V D +
Sbjct: 892 ISKSSILLMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVM 951
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
EM + G P S L+ S ++Y+ + G Y L+
Sbjct: 952 LSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCR 1011
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+ L L H+M+ G + Y +IA + A + EE G+ R
Sbjct: 1012 DHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSF 1071
Query: 515 YSKLSNKLLASNKLESAYNLFRKIKIA 541
Y + S + A NL +K A
Sbjct: 1072 YHLMMKMYRTSGDHQKAENLLEIMKEA 1098
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 200/471 (42%), Gaps = 91/471 (19%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG------VNPD 197
+ ++ +F W K +V+ + ++ L K ++ + +L AK +
Sbjct: 88 DLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHS 147
Query: 198 LETL-------SIVMD----SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
L L SI++D ++++ G++ A++ R D+G + A S N +L L +
Sbjct: 148 LSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKE 207
Query: 247 LHVGAASSLFNSMKGK----------VLFN--------------------------VMTY 270
+G S++ M + V+ N V+TY
Sbjct: 208 GRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITY 267
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
N +I G+ K G++ + + +LKE+VA+ P+ +TF+ LI+G R + A +VF+ M+
Sbjct: 268 NTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQR 327
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
+G P+ YN++I+ S G DE + MS +PN+ TY LI+G K + + +
Sbjct: 328 QGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKE 387
Query: 391 ALEVFEE-----------------------------------MLDRGIVPSTGTITSFLE 415
A E+ ++ MLD G+ P+ T +
Sbjct: 388 AREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIV 447
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG---KCGMLLDLWHEMQESG 472
C G A + K+ G K L Y +L+ L G K LLD M++ G
Sbjct: 448 GFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKG 507
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
++ Y +I G CN G+LE A ++ E L KG P+R Y L ++++
Sbjct: 508 RRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMM 558
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 57/117 (48%)
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ + +A G +LS + +L L G+ G++ ++ EM + ++ VI
Sbjct: 178 ALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVIN 237
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
GLC +G+ + A V+E+ GF PS + Y+ + + + K+ A L +++ R
Sbjct: 238 GLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKR 294
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 177/391 (45%), Gaps = 36/391 (9%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
VL+ + K G P++ TL+ ++ GQ+++A+Q ++ G + S ++ LC
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLC 188
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ AA L + GK V NV+ YN +I K+ V E + E+V++G SPD +
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 248
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTM--------------------KEK------------ 331
T++ LI G G++ DA ++F+ M KE+
Sbjct: 249 TYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMM 308
Query: 332 ---GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
G PD YN+++ Y V + ++ + +S PN+ +Y+ +I G K +KV
Sbjct: 309 MKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKV 368
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A+ +F+EM I+P T S ++ LC G A+ + + G Y +
Sbjct: 369 DEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSI 428
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L L + + L +M++ G D Y ++ GLC G+LE+A +V E+ L KG+
Sbjct: 429 LDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGY 488
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+Y+ + + + + +L K++
Sbjct: 489 ILDVNIYTAMIQGFCSHGLFDESLDLLSKME 519
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 185/391 (47%), Gaps = 1/391 (0%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
FN + N + + I+ +L + + + ++ M G+ DL LSI+++ F
Sbjct: 59 FNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFS 118
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVM 268
+ GQ + +L ++ G + + +L ++ LC + + A + + N +
Sbjct: 119 QLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKV 178
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
+Y +I+G K+GQ ++L+ + + P+ + ++ +I+ + + +++A +++ M
Sbjct: 179 SYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 238
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
KG PD YNA+IS + VG + + M N PN+ T+ L+ G K R++
Sbjct: 239 VSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRL 298
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A V M+ +GI P T S ++ C + A ++ + G ++ +Y ++
Sbjct: 299 KEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIM 358
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ K ++L+ EM + D Y +I GLC +G++ A+ +++E +G
Sbjct: 359 IHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 418
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ Y+ + + L +++++ A L K+K
Sbjct: 419 PHDKITYNSILDALCKNHQVDKAIALLTKMK 449
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 170/349 (48%), Gaps = 7/349 (2%)
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAAS 253
V P++ + ++DS + V +A + + G+ D + N ++ C + A+
Sbjct: 208 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDAT 267
Query: 254 SLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
LFN M + NV T+NI++ G+ K ++ E + VL ++ +G PD T++ L++
Sbjct: 268 DLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRY 327
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
++ A +F+T+ ++G P+ ++Y+ +I + + DE M +K M N P++
Sbjct: 328 CLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDV 387
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
TY LI GL K K++ AL++ +EM DRG+ T S L+ LC A+ + K
Sbjct: 388 VTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTK 447
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCN 489
+ G + + Y L + G K G L D ++ ++ GY D IY +I G C+
Sbjct: 448 MKDEGIQPDICTYTTL---VDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCS 504
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G + ++ ++ + G P+ + Y + L ++ + A L R++
Sbjct: 505 HGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREM 553
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 168/351 (47%), Gaps = 36/351 (10%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ DV +YN ++ ++ + M E +NP++ T +I++D F + ++ +A
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAK 302
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+L + G+K D + N ++ C V A +FN++ + V N+ +Y+I+I G+
Sbjct: 303 NVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGF 362
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K+ +V E + KE+ PD +T++ LI+GL + G+I A+++ D M ++G D
Sbjct: 363 CKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDK 422
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN+++ D+ + M +P++ TYT L+ GL K+ ++ DA VFE+
Sbjct: 423 ITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFED 482
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+L +G + T+ ++ CS+G ++ ++
Sbjct: 483 LLVKGYILDVNIYTAMIQGFCSHG-------LFDES------------------------ 511
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
LDL +M+E+G + YE +I L + + + A ++ E + +G
Sbjct: 512 ----LDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 171/358 (47%), Gaps = 1/358 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V++Y ++ L R + + M KEG+ P+ T + +++ G+ A+++
Sbjct: 379 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF 438
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+E G + ++ N ++ LC + A LF M K L V+TYN +I+G+
Sbjct: 439 HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK 498
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G V R+L + G PD T++ L+ G + G+++ A F M E G P+ +Y
Sbjct: 499 GNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSY 558
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+I + G D + + M C PN+++Y +I+GL K + ++A ++ ++M +
Sbjct: 559 TTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAE 618
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G++P+ T T+ ++ LC G A ++ K C +L Y L+ L GK
Sbjct: 619 QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 678
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
L EM+ G D + +I G +G++++A L++ + G P+ YS L
Sbjct: 679 AEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVL 736
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 181/397 (45%), Gaps = 16/397 (4%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
E+++ FF W K P ++ + ++ L R + F ++ M K N +
Sbjct: 131 ESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEE------ 184
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
++ + L + G F S N +L L + V A +L+ M
Sbjct: 185 ---------EIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG 235
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ +++T+N +I+ SK G+V E E +L +I SPD T++ LI G R +D A
Sbjct: 236 IQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAF 295
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
VFD M ++GC P++ Y+ +I+ + G DE + + M EP + TYT I+ L
Sbjct: 296 GVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITAL 355
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+A+E+ M RG P+ T T+ + L G A+ +Y K K G +
Sbjct: 356 CAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNT 415
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L+ L G+ L ++H M+ G ++ + Y +I GLC G +E A+++ E+
Sbjct: 416 VTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEK 475
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
L+ G P+ + Y+ L N L + +A L +K
Sbjct: 476 MLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK 512
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 178/383 (46%), Gaps = 1/383 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+++ DV +Y ++ R + D V M KEG +P+ T S +++ G+V +A
Sbjct: 270 DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEA 329
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
+ ML + + G++ + + + LC H A L MK + NV TY +ISG
Sbjct: 330 LDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISG 389
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
S+LG++ + +++ EG P+++T++ LI L GR A+++F M+ G +
Sbjct: 390 LSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLAN 449
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
T YN +I GD ++ M ++ M P + TY LI+G L V +A + +
Sbjct: 450 TQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLD 509
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
M + G P T + +G +A +++ + G + +Y L+ S G
Sbjct: 510 LMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDG 569
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K + L L M+E G + E Y VI GL + A + ++ +G P+ + Y+
Sbjct: 570 KVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYT 629
Query: 517 KLSNKLLASNKLESAYNLFRKIK 539
L + L + + + A+ +F ++
Sbjct: 630 TLIDGLCRNGRTQFAFKIFHDME 652
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 191/415 (46%), Gaps = 20/415 (4%)
Query: 125 VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCN 184
VD +LD++ +++ +G + V +Y + + AL + +
Sbjct: 326 VDEALDMLEEMIEKG-------------------IEPTVYTYTLPITALCAIEHEEEAIE 366
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+++ M K G P+++T + ++ R G++ AI + ++ GL + + N ++ LC
Sbjct: 367 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 426
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
A +F+ M+G L N TYN +I G G + + + ++++ G P +
Sbjct: 427 VGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 486
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T++ LI G G +++A + D MKE GC PD YN ++S + G + Y++ M
Sbjct: 487 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 546
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
PN +YT LI G K KV AL + E M + G P+ + + + L
Sbjct: 547 VECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRF 606
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A + K + G ++ Y L+ L G+ ++H+M++ + Y +
Sbjct: 607 SEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 666
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
I GLC G+ + A ++++E RKG P + ++ L + + +++ A+ L R++
Sbjct: 667 IYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 721
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 185/406 (45%), Gaps = 25/406 (6%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SY ++ + D ++L M + G NP++E+ + V++ + + +A ++ ++
Sbjct: 557 SYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKM 616
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ GL + + ++ LC+ A +F+ M K K L N+ TY+ +I G + G+
Sbjct: 617 AEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKA 676
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E E +LKE+ +G +PD +TF+ LI+G GRID A + M + GC P+ Y+ +
Sbjct: 677 DEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVL 736
Query: 344 I------------------------SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
+ S + +F+ MS CEP +DTY+ L+
Sbjct: 737 LKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLV 796
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
SGL + + +A ++ ++M +RG P S L C A+ ++ G +
Sbjct: 797 SGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQ 856
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
L L+ Y+ L+ L G+ L+ M E + +D ++ ++ GL G+L+ + +
Sbjct: 857 LHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKL 916
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQND 545
+ K F P+ Y L +L K + L K+K+ + ++
Sbjct: 917 LHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLKVLKDSN 962
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 178/376 (47%), Gaps = 1/376 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S N ++ L + + + N+ M G+ P L T + +++ + G+V +A +L ++
Sbjct: 207 SCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQI 266
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ L D + ++ C+ ++ A +F+ M K N +TY+ +I+G G+V
Sbjct: 267 FQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRV 326
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E +L+E++ +G P T++ I L ++AIE+ MK++GC P+ Y A+
Sbjct: 327 DEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTAL 386
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS +G + + Y M PN TY LI+ L + + AL++F M G
Sbjct: 387 ISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGS 446
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+ +T T ++ LC G AM++++K K+G ++ Y L+ G
Sbjct: 447 LANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAAR 506
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L M+E+G D Y +++G G+LE+A +E + G P+ + Y+ L +
Sbjct: 507 LLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHS 566
Query: 524 ASNKLESAYNLFRKIK 539
K++ A +L +++
Sbjct: 567 KDGKVDIALSLLERME 582
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 185/402 (46%), Gaps = 37/402 (9%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
R +A+ LF + P A V +YNV+++ D ++L +M EG+ +
Sbjct: 3 RAGSHNQALQLFRENPCQLP--ASSV-TYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
T SI++ R G+V +A++ FDA L + A
Sbjct: 60 DRTTSIILQGLCRCGRVAQALE----------HFDAS------------LELAHAQP--- 94
Query: 258 SMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG-FSPDSLTFSFLIEGLGRAG 316
+V++Y +I+G KLG+V + +++VA G P++ T++ L++GL +
Sbjct: 95 --------DVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQD 146
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
R+D A V +++ PD YN +++ +G DE + + M+ P + ++
Sbjct: 147 RLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFN 206
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+I+GL ++R++ADALEVF EM+DR P+ T + ++ LC A + +
Sbjct: 207 AIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSE 266
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
GC+ L AY L+ S G+ L L M G D Y VI LC +G++++A
Sbjct: 267 GCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDA 326
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ E + P+ + YS L +++++ + R++
Sbjct: 327 HEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM 368
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 165/363 (45%), Gaps = 13/363 (3%)
Query: 100 ERLRGVFLQKLKGKGVIEDALWNVNVDLSL-----DVVGKVVNRGNLSG----EAMVLFF 150
+R + LQ L G + AL + + L L DVV L +A F
Sbjct: 60 DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119
Query: 151 NWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR 210
+ + +YN +V L ++ D V+++ K PD+ T + +M + +
Sbjct: 120 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQ 179
Query: 211 AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMT 269
G+V +A+ ++ + G S N ++ LC+ + A +FN M + N++T
Sbjct: 180 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 239
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
Y++VI G K Q+ E +++L +V+EG PD + ++ L+ G AGR+D A+ + M
Sbjct: 240 YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 299
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
+GC PD Y VI VG D+ + ++ + + C PN+ TY+ LI G ++ +V
Sbjct: 300 SQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVD 359
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
+ +V EM R P+ T + + L A M+++ + G Y+ L
Sbjct: 360 EGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLK 416
Query: 450 RRL 452
R L
Sbjct: 417 RAL 419
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 434 RKVGCKL--SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
R+ C+L S Y +L+R L EM G + ++ GLC G
Sbjct: 15 RENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCG 74
Query: 492 QLENAVLVMEESLRKGFC-PSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
++ A+ + SL P + Y+ L N L ++++A++LFRK+ A
Sbjct: 75 RVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAA 125
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 163/331 (49%), Gaps = 4/331 (1%)
Query: 165 SYNVIVKAL-GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+YN ++ +L GR + D + + +PD+ + ++V+ R GQV KA++++ R
Sbjct: 215 AYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVER 274
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLG 281
+ +FG D + N+++ LC+ V + ++ G + NV+T+ VISG+ K G
Sbjct: 275 MNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 334
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ + V ++VA G P+++T++ LI G G+ G + A+EV+ M C PD ++
Sbjct: 335 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 394
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM-LD 400
++I Y G D+ ++ + M+ + +PN+ T++ +I L K + +A+ + E+ L
Sbjct: 395 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLR 454
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
I P ++ LC G A ++ K + GC+ Y +L+ +
Sbjct: 455 PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISE 514
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ +HEM E+G D I+ L G
Sbjct: 515 AIMFFHEMVEAGCSPDSITVNCFISCLLKAG 545
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 176/368 (47%), Gaps = 18/368 (4%)
Query: 178 FFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE-DFGLKFDAESL 236
F C+ LS + P + ++ R+G+ A+Q+ ++ +G DA L
Sbjct: 128 FTALHCSPLS------ITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFL 181
Query: 237 N-VVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
+ +V C C L +A+ L + + YN ++S G+V ++ + + +
Sbjct: 182 SFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQ 241
Query: 296 EG-FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
+ +SPD +F+ +I+G+ R G++ A+E+ + M E GC PDT +N ++ +
Sbjct: 242 DRLYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVS 301
Query: 355 ECMKYYKGMSSYN-CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
+ + + C PN+ T+T +ISG K+ K+ DA+ V+ +M+ GI+P+T T
Sbjct: 302 RGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVL 361
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQE 470
+ G +A+ +Y++ ++ C + + L + G+ +CG L D +W +M +
Sbjct: 362 INGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSL---IDGYCRCGQLDDALRIWSDMAQ 418
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE-SLRKGFCPSRLVYSKLSNKLLASNKLE 529
+ + +I LC + + A+ ++ E +LR P +Y+ + + L K++
Sbjct: 419 HRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVD 478
Query: 530 SAYNLFRK 537
A NL RK
Sbjct: 479 EA-NLIRK 485
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 182/407 (44%), Gaps = 38/407 (9%)
Query: 135 VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
V+ R +A+ LF + H + D + + +V + D +LS ++ G
Sbjct: 151 VLCRSGRQADALQLF-DQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGC 209
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGR-LEDFGLKFDAESLNVVLWCLCQRLHVGAAS 253
+ + +M S I G+V+ + + R ++D D S NVV+ +C+ V A
Sbjct: 210 RVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKAL 269
Query: 254 SLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS-PDSLTFSFLIEG 311
L M + +T+NI++ G + +V VL+ + +G P+ +TF+ +I G
Sbjct: 270 ELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISG 329
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
+AG+++DA+ V++ M G P+T YN +I+ Y VGD ++ Y+ M+ C P+
Sbjct: 330 YCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPD 389
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+ T++ LI G + ++ DAL ++ +M I P+ T + + LC K
Sbjct: 390 VVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLC------------K 437
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ R S A +LL L+L ++ + IY VI LC G
Sbjct: 438 QNR------SDEAIRLLNE-----------LNLRPDIAPQAF-----IYNPVIDVLCKCG 475
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+++ A L+ + KG P + Y+ L +++ A F ++
Sbjct: 476 KVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEM 522
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 151/332 (45%), Gaps = 40/332 (12%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
++ ++ RG + + + LF W I+ + DV S+NV++K + R ++ M
Sbjct: 219 LMSSLIGRGRVH-DVVALFERW-IQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVERMN 276
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF-DAESLNVVLWCLCQRLHV 249
+ G +PD T +I++D R +V + ++L RL+ G+ + + V+ C+ +
Sbjct: 277 EFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKL 336
Query: 250 GAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
A +++N M ++ N +TYN++I+G+ K+G + V +++ PD +TFS L
Sbjct: 337 EDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSL 396
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA----------------------------- 339
I+G R G++DDA+ ++ M + P+
Sbjct: 397 IDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPD 456
Query: 340 -------YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
YN VI G DE KGM C P+ TYT LI G ++++A+
Sbjct: 457 IAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAI 516
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
F EM++ G P + T+ F+ L G P+
Sbjct: 517 MFFHEMVEAGCSPDSITVNCFISCLLKAGMPN 548
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 86/172 (50%), Gaps = 2/172 (1%)
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP-PHAAMM 428
P+ + ++I L +S + ADAL++F++M SFL C+ A+
Sbjct: 140 PSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASAT 199
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE-MQESGYPSDGEIYEYVIAGL 487
+ KA + GC++ AY L+ L G G+ ++ L+ +Q+ Y D + VI G+
Sbjct: 200 LLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGV 259
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
C +GQ++ A+ ++E G P + ++ + + L +N++ + + R+++
Sbjct: 260 CRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQ 311
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 192/432 (44%), Gaps = 43/432 (9%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG---VNPDLETLSIVM 205
FF WA K N D +Y ++ L + + M ++ +M + V P LS V+
Sbjct: 109 FFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTP--MELSQVI 166
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKV 263
A + KAI + +++ + A++ N ++ L L+N M +G
Sbjct: 167 RMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHC 226
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS------------------------ 299
+ +TY+ +IS + KLG+ R+L E+ G
Sbjct: 227 QPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALS 286
Query: 300 -----------PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
PD T++ LI GLG+AGRID+A + M+ +GC PDT N +I+
Sbjct: 287 LFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLG 346
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR-KVADALEVFEEMLDRGIVPST 407
G D+ +K ++ M +C PN+ TY +I L +S+ +V++ FE M GI PS
Sbjct: 347 KAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSP 406
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T + ++ C AMM+ ++ + G AY L+ L + + +L+ E
Sbjct: 407 FTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQE 466
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
++E+ S +Y +I L G+L++A+ + +E + G P+ Y+ L + L +
Sbjct: 467 LKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACM 526
Query: 528 LESAYNLFRKIK 539
L+ A RK++
Sbjct: 527 LDEALTTMRKMQ 538
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 197/420 (46%), Gaps = 5/420 (1%)
Query: 123 VNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFM 182
V + L V +++ + G+A+ +F+ IK ++YN ++ L ++ +
Sbjct: 156 VVTPMELSQVIRMLGNAKMIGKAITIFYQ--IKARKCQPTAQAYNSMIIMLIHEGQYEKV 213
Query: 183 CNVLSDMAKEG-VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLW 241
+ ++M+ EG PD T S ++ +F + G+ AI++L +++ G++ A+ +++
Sbjct: 214 HELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIIS 273
Query: 242 CLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
+ +V A SLF M+ +V TY +I G K G++ E E+ EG P
Sbjct: 274 LFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKP 333
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN-YISVGDFDECMKY 359
D++ + +I LG+AGR+DD +++F+ M C P+ YN +I + S E +
Sbjct: 334 DTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSW 393
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
++ M P+ TY+ LI G K+ ++ A+ + EEM ++G P S ++ L
Sbjct: 394 FERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGK 453
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
A ++++ ++ S Y ++++ L G+ ++L+ EM + G +
Sbjct: 454 AKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYA 513
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y +++GL L+ A+ M + G P Y+ + N L + A + +K
Sbjct: 514 YNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMK 573
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 154/336 (45%), Gaps = 8/336 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y +++ LG+ D + +M +EG PD ++ +++ +AG++ +++
Sbjct: 299 DVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLF 358
Query: 222 GRLEDFGLKF---DAESLNVVLWCLCQ-RLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
E+ G+ + + N ++ L + + V S F MKG + + TY+I+I G
Sbjct: 359 ---EEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDG 415
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K ++ + +L+E+ +GF P + LI+ LG+A R D A E+F +KE
Sbjct: 416 FCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSS 475
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y +I + G D+ + + MS C PN+ Y L+SGL ++ + +AL
Sbjct: 476 ARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMR 535
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+M + G +P + L L G PH AM M + K +Y +L LS G
Sbjct: 536 KMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAG 595
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+L EM G+ D Y ++ + + Q
Sbjct: 596 MFEEAAELMKEMNALGFEYDLITYSSILEAIGKVDQ 631
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 120/279 (43%), Gaps = 43/279 (15%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSP----DSLTFSFLIEGLGRAGRIDDAIEV 324
TY +I + Q EM ++++E+V SP + S +I LG A I AI +
Sbjct: 125 TYMALIHCLELVEQYGEMWKMIQEMVR---SPICVVTPMELSQVIRMLGNAKMIGKAITI 181
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY-NCEPNMDTYTRLISGLL 383
F +K + C P AYN++I I G +++ + Y MS+ +C+P+ TY+ LIS
Sbjct: 182 FYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFC 241
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
K + A+ + EM + G+ P+ T + H A+ ++++ R + C+ +
Sbjct: 242 KLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVF 301
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
Y L+R G GK G+++ A E
Sbjct: 302 TYTELIR---GLGKA--------------------------------GRIDEAYHFYHEM 326
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
R+G P +V + + N L + +L+ LF ++ ++
Sbjct: 327 QREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSH 365
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 207/451 (45%), Gaps = 27/451 (5%)
Query: 112 GKGVIEDALWNVNVDLSL--------------DVVGKV---------VNRGNLSGEAMVL 148
G GV D L+NV VDL + V+ KV +++ + G A+
Sbjct: 180 GFGVF-DTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSF 238
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F + + ++ V +YN+++ L R + ++ +M +G+ PD+ T + ++D +
Sbjct: 239 FKDMVVA--GLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGY 296
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NV 267
+ G + A+ + ++D G + D + N ++ C C+ + A + MK + L NV
Sbjct: 297 GKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNV 356
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TY+ +I + K G ++E + +++ G P+ T++ LI+ + G +++A ++
Sbjct: 357 VTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESE 416
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M++ G + Y A++ G E + + + N YT L G +K++
Sbjct: 417 MQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKM 476
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ A+++ EEM + + P + + LC +M + ++ G + Y
Sbjct: 477 MEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTT 536
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L+ GK ++L EMQ+ G Y +I GLC IG ++ AV + R G
Sbjct: 537 LIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNG 596
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ ++Y+ L + L ++ LE A NLF ++
Sbjct: 597 LQPNIMIYTALIDGLCKNDCLEEAKNLFNEM 627
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 178/377 (47%), Gaps = 6/377 (1%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+K + ++ + FFD + + + P + + + G + +A Q
Sbjct: 151 IKEWILLGREFPGCDFFDMLWST-----RNVCRPGFGVFDTLFNVLVDLGMLEEARQCFW 205
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLG 281
++ F + S N +L L + G A S F M L +V TYN+VI ++ G
Sbjct: 206 KMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREG 265
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ + +E+ A+G PD +T++ LI+G G+ G + A+ VF+ MK+ GC PD YN
Sbjct: 266 DLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYN 325
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++I+ + + +Y GM +PN+ TY+ LI K+ + +A + F +M+
Sbjct: 326 SLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRV 385
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G+ P+ T TS ++ C G + A + + ++ G L++ Y LL L G+
Sbjct: 386 GLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREA 445
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+L+ + ++G+ + +IY + G +E A+ ++EE +K P L+Y
Sbjct: 446 EELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWG 505
Query: 522 LLASNKLESAYNLFRKI 538
L N++E + + R++
Sbjct: 506 LCRQNEIEDSMAVIREM 522
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 160/349 (45%), Gaps = 9/349 (2%)
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
S+M + GVN ++ T + ++D G++ +A ++ G L G + + + +
Sbjct: 415 SEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKA 474
Query: 247 LHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
+ A + M K L +++ Y I G + ++ + V++E++ G + +S +
Sbjct: 475 KMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIY 534
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LI+ + G+ +A+ + M++ G Y +I +G + ++Y+ M+
Sbjct: 535 TTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTR 594
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
+PN+ YT LI GL K+ + +A +F EMLD+GI P TS ++ +G P
Sbjct: 595 NGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGE 654
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ + + ++G +L L AY L+ S +G+ + L EM G D + ++
Sbjct: 655 ALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLR 714
Query: 486 GLCNIGQLENAVLVMEESLRKGF--------CPSRLVYSKLSNKLLASN 526
+G + A+ + ++ R+G PS L +KL AS
Sbjct: 715 KYYELGDINEALALHDDMARRGLISGTIDITVPSCLTAVTKLHKLCASQ 763
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 195/486 (40%), Gaps = 54/486 (11%)
Query: 100 ERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNV 159
E R +F +++K KG+ D V + +D GKV G L+G V +K
Sbjct: 268 EAARSLF-EEMKAKGLRPDI---VTYNSLIDGYGKV---GMLTGAVSVF---EEMKDAGC 317
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA-- 217
DV +YN ++ + + L M + G+ P++ T S ++D+F +AG + +A
Sbjct: 318 EPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANK 377
Query: 218 --------------------IQMLGRLEDFGLKFDAES--------LNVVLWC-----LC 244
I ++ D F ES LN+V + LC
Sbjct: 378 FFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLC 437
Query: 245 QRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ + A LF ++ K N Y + G+ K + + +L+E+ + PD L
Sbjct: 438 EDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLL 497
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
+ I GL R I+D++ V M + G ++ Y +I Y VG E + + M
Sbjct: 498 LYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEM 557
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ + TY LI GL K V A+ F+ M G+ P+ T+ ++ LC
Sbjct: 558 QDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCL 617
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A ++ + G Y L+ G G L L + M E G D Y +
Sbjct: 618 EEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSL 677
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
I G GQ++ A +++E LRKG P +++ L K + A +A
Sbjct: 678 IWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEA--------LALH 729
Query: 544 NDYARR 549
+D ARR
Sbjct: 730 DDMARR 735
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 115/293 (39%), Gaps = 13/293 (4%)
Query: 261 GKVLFNVMTY---NIVISGWSKLGQ------VVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
+LF M Y VI W LG+ +M + + GF F+ L++
Sbjct: 135 AHILFCGMFYLDARSVIKEWILLGREFPGCDFFDMLWSTRNVCRPGFGVFDTLFNVLVD- 193
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
G +++A + F M + P + N ++ + ++K M P+
Sbjct: 194 ---LGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPS 250
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+ TY +I L + + A +FEEM +G+ P T S ++ G A+ +++
Sbjct: 251 VFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFE 310
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ + GC+ + Y L+ F + + H M++ G + Y +I C G
Sbjct: 311 EMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAG 370
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
L A + +R G P+ Y+ L + L A+ L +++ A N
Sbjct: 371 MLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVN 423
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 206/468 (44%), Gaps = 44/468 (9%)
Query: 107 LQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSY 166
L+ L G+G D + N N+ V+ V ++G + EA+ L + + DV SY
Sbjct: 169 LRDLHGRGCALD-VGNCNL-----VLQAVCDQGPVD-EAVRLLRDL-LPSFGCEPDVVSY 220
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
N +++ L + + + +++ +M G P++ T S ++ R G + ++ ++ +
Sbjct: 221 NAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAE 280
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVE 285
G D ++ +C+ + A + N M L NV+ YN ++ G + E
Sbjct: 281 HGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEE 340
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
E +L E+ + D +TF+ L++ L + G +D IEV + M E GC PD Y VI+
Sbjct: 341 AEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVIN 400
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+ G DE + + M++ C PN +YT ++ GL + + DA E+ +M+ +G P
Sbjct: 401 GFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPP 460
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL---------------- 449
+ T + + LC G A+ + K+ GC L +Y ++
Sbjct: 461 NPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELL 520
Query: 450 -------------------RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
LSG G+ ++ ++ +Q++ SD +Y VI+ LC
Sbjct: 521 NVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKR 580
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G+ + A+ + + G P+ Y+ L L + ++ A + ++
Sbjct: 581 GETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTEL 628
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 172/414 (41%), Gaps = 37/414 (8%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
VA + +Y +V+AL R VL DMA+ G P + +++ RA A+
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK--VLFNVMTYNIVISG 276
+L L G D + N+VL +C + V A L + +V++YN V+ G
Sbjct: 167 GVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRG 226
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ ++ +++E+VA G P+ +TFS LI L R G + EV M E GC PD
Sbjct: 227 LCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPD 286
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA----- 391
Y +I + M SY PN+ Y L+ GL + + +A
Sbjct: 287 VRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLA 346
Query: 392 ------------------------------LEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
+EV E+ML+ G +P T T+ + C G
Sbjct: 347 EMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEG 406
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
A+M+ + GC+ + +Y ++L+ L + +L +M + G P + +
Sbjct: 407 LIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFN 466
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+I LC G +E A+ ++++ L G P + YS + + L + + A L
Sbjct: 467 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELL 520
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 127/340 (37%), Gaps = 74/340 (21%)
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
YN +++G+ + GQ+ R+ + +P++ T+ L+ L GRI DA+ V D M
Sbjct: 82 YNAMVAGYCRAGQLAAARRLAASV---PVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138
Query: 330 EKGCGPDTNAY-----------------------------------NAVISNYISVGDFD 354
+GC P Y N V+ G D
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198
Query: 355 ECMKYYKG-MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
E ++ + + S+ CEP++ +Y ++ GL +R+ ++ EEM+ G P+ T ++
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258
Query: 414 LEPLCSYG------PPHAAMMMYKKARKV-----------------------------GC 438
+ LC G HA M + A V G
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
++ Y LL+ L + L EM + P D + ++ LC G ++ +
Sbjct: 319 SPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIE 378
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
V+E+ L G P + Y+ + N ++ A L R +
Sbjct: 379 VLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSM 418
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 169/390 (43%), Gaps = 36/390 (9%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V D K GV P++ T +I++ + +A++++ ++ ++G D + N VL LC
Sbjct: 198 VFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALC 257
Query: 245 QRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+R + L MK LF N TYNI++ G+ KL + E V++ + +G PD
Sbjct: 258 KRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVW 317
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN----------------- 346
T++ ++ GL G+ID+A+ + D M+ PD YN +I
Sbjct: 318 TYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEM 377
Query: 347 ------------------YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ + G DE M P+ TY +I+G K+ K+
Sbjct: 378 KARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKM 437
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A+A ++ +EM +G+ T T+ + L +C A + KARK G L Y L
Sbjct: 438 AEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTL 497
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ + L LW EM+E+G + Y +I GLC G+ + AV + E L KG
Sbjct: 498 IMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGL 557
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P + + + +E A+ K+
Sbjct: 558 VPDESTSNIIIHGYCWEGAVEKAFQFHNKM 587
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 176/420 (41%), Gaps = 42/420 (10%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K+ + + +YN++V + K+ V+ M +G+ PD+ T + ++ G+
Sbjct: 272 MKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGK 331
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK------VLFNV 267
+ +A+++ ++E F L D + N ++ + AA L MK + V N+
Sbjct: 332 IDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNI 391
Query: 268 M------------------------------TYNIVISGWSKLGQVVEMERVLKEIVAEG 297
M TYN +I+G+ K G++ E +++ E+ +G
Sbjct: 392 MIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKG 451
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
D+ T + L+ + ++DDA + +++G D Y +I Y D +
Sbjct: 452 LKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRAL 511
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
K ++ M + TY +I GL S K A++ E+L++G+VP T +
Sbjct: 512 KLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGY 571
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYP 474
C G A + K + K + +LLR G + GML L L++ G P
Sbjct: 572 CWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLR---GLCREGMLEKGLTLFNTWISKGKP 628
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
D Y +I+ C +LE+A +M E K P R Y+ + L + + E A L
Sbjct: 629 MDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKL 688
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 175/386 (45%), Gaps = 12/386 (3%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K V ++ ++N+++K D NV+ M + G +PD T + +++ + +AG+
Sbjct: 377 MKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGK 436
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL-FNSMKGKVLFNVMTYNI 272
+ +A +M+ + GLK D +LN +L +C + A +L + K + + +TY
Sbjct: 437 MAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGT 496
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G+ K Q ++ +E+ G +T++ +I GL +G+ D A++ + + EKG
Sbjct: 497 LIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKG 556
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD + N +I Y G ++ +++ M ++ +P++ T L+ GL + + L
Sbjct: 557 LVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGL 616
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+F + +G T T + C A + + + Y ++ L
Sbjct: 617 TLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGL 676
Query: 453 SGFGKCGMLLDLWHEMQESGY--------PSDGE---IYEYVIAGLCNIGQLENAVLVME 501
+ G+ L + E G P G +Y I+ LC G+ ++A+ + +
Sbjct: 677 TKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQ 736
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNK 527
++ +KG ++ Y KL + LL K
Sbjct: 737 QAEQKGVSLNKYTYIKLMDGLLKRRK 762
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 154/369 (41%), Gaps = 46/369 (12%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED---FGLKFDAESLNVVL 240
+ + M + P+L T + ++++ +R+ + + +D G++ + + N+++
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILI 218
Query: 241 WCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
C + A L N M G NV TYN V++ K Q+ ++ +L ++ G
Sbjct: 219 HGYCSDNNTEEALRLINQMGEYGCCPDNV-TYNTVLTALCKRSQLTQVRDLLLQMKNSGL 277
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
P+ T++ L+ G + + +A EV + M KG PD YN ++ G DE ++
Sbjct: 278 FPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVR 337
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
M S+ P++ TY LI G + R A ++ EEM RG+ + T ++ C
Sbjct: 338 LRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFC 397
Query: 419 SYGP-PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
+ G A+ +M K M ESG+ D
Sbjct: 398 TEGKIDEASNVMVK------------------------------------MVESGFSPDC 421
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
Y +I G C G++ A +M+E RKG + L + + +L+ AY L K
Sbjct: 422 FTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMK 481
Query: 538 IKIARQNDY 546
AR+ Y
Sbjct: 482 ---ARKRGY 487
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 137/316 (43%), Gaps = 16/316 (5%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D + N ++ + K D + K G D T ++ + + Q +A+++
Sbjct: 455 DTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLW 514
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
+++ G+ + N ++ LC A N + K L + T NI+I G+
Sbjct: 515 EEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWE 574
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G V + + ++V PD T + L+ GL R G ++ + +F+T KG DT Y
Sbjct: 575 GAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTY 634
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +IS++ ++ M N EP+ TY +++GL K+ + +A ++ + +
Sbjct: 635 NIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAE 694
Query: 401 RG-------IVPSTGT----ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY-KL- 447
+G P GT + + LC+ G AM ++++A + G L+ Y KL
Sbjct: 695 KGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLM 754
Query: 448 --LLRRLSGFGKCGML 461
LL+R F +L
Sbjct: 755 DGLLKRRKSFTTTSLL 770
>gi|334183891|ref|NP_177483.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806278|sp|Q9FX35.2|PP117_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g73400, mitochondrial; Flags: Precursor
gi|332197336|gb|AEE35457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 568
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/463 (23%), Positives = 204/463 (44%), Gaps = 12/463 (2%)
Query: 102 LRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAK 161
L + L +E AL +VDL+ VV K++ R + FF WA + +
Sbjct: 98 LHEAIMANLNAYDDMEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSH 157
Query: 162 DVKSYNVIVKALGRRKF----FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY-K 216
+ +YN ++ L K+ F + ++L M + N + + ++++ + + Y
Sbjct: 158 EPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRN--NKTVVLVDVLLEILRKYCERYLT 215
Query: 217 AIQMLGRLEDFGLKFDAE--SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVI 274
+Q + + +K E + N++L LC+ V +L M+ +V + T+N++
Sbjct: 216 HVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLF 275
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG-- 332
GW ++ + ++L+E++ G P++ T+ I+ +AG +D+A ++FD M KG
Sbjct: 276 FGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSA 335
Query: 333 -CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
P + +I +EC + M S C P++ TY +I G+ + KV +A
Sbjct: 336 VSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEA 395
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+ +EM ++G P T FL LC A+ +Y + + C S+ Y +L+
Sbjct: 396 YKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISM 455
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
+ W EM + D E Y +I GL + + + A ++EE + KG
Sbjct: 456 FFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLP 515
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYARRLWRSK 554
V+ +L L++ + + +K + ARR S+
Sbjct: 516 YRVFDSFLMRLSEVGNLKAIHKVSEHMKKFYNHSMARRFALSE 558
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 180/394 (45%), Gaps = 3/394 (0%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FF +K+ + D SYN+++ L + + +DM K+G+ PD+ T IV F
Sbjct: 207 FFCMMLKY-GILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGF 265
Query: 209 IRAGQVYKAIQMLGR-LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFN 266
G + A +++ + L D GLK D + V++ CQ ++ A L + N
Sbjct: 266 HLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLN 325
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V+ Y++++S K GQV E ++L E+ A PD +T+S LI GL + G++ AI+++
Sbjct: 326 VILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYK 385
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M P++ A++ ++ G + Y+ + N P++ Y +I G +K
Sbjct: 386 EMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLG 445
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
V +A+ +++ + D+ I PS T S + C A + + + G + S Y
Sbjct: 446 DVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYT 505
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+ G L +L EM Y VI GLC +LE +V ++E+ K
Sbjct: 506 TLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAK 565
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
G P ++ Y+ + + + A+ L + I
Sbjct: 566 GLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLI 599
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 180/406 (44%), Gaps = 36/406 (8%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y+V++ +L +R D +L +M + PDL T SI++ + G+V +AIQ+ +
Sbjct: 329 YSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMC 388
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVV 284
+ ++ + + +L LC++ + A F+S+ + +V YNI+I G+ KLG V
Sbjct: 389 FNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVE 448
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E R+ K + + +P +TF+ LI G + ++ +A + +++K G P Y ++
Sbjct: 449 EAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLM 508
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ Y G+ ++ + M+ + EP + TYT +I GL K RK+ +++++ E+M +G+
Sbjct: 509 NAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLA 568
Query: 405 PSTGTITSF------------------------LEP-----------LCSYGPPHAAMMM 429
P T + LEP LC YG A +
Sbjct: 569 PDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRV 628
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ L+ AY +++ G + ++H+M E G+ + Y VI LC
Sbjct: 629 LVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCK 688
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ A L G P + ++ + N + + S + L
Sbjct: 689 RCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELL 734
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 174/398 (43%), Gaps = 11/398 (2%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
LF +K N+ +++YN ++ L + D M +V +D+ G T SI++D
Sbjct: 103 LFVLVKMKEQNLRPSIQTYNSLLYNL---RHTDIMWDVYNDIKDSGTPQSARTSSIIVDG 159
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFN 266
+ A+ L + + S N ++ C+ A S F M K +L +
Sbjct: 160 LCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPD 219
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
+YNI+I G G + E + ++ +G PD +T+ + +G G + A E+
Sbjct: 220 TYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQ 279
Query: 327 TM-KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
M ++G PD Y +I + +G+ +E ++ + + S + N+ Y+ L+S L K
Sbjct: 280 KMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKR 339
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+V +AL++ EM + P T + + LC G A+ +YK+ + A+
Sbjct: 340 GQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAH 399
Query: 446 KLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
+L+ G + GML D + + S D +Y +I G +G +E AV + +
Sbjct: 400 SGILK---GLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKR 456
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
K PS + ++ L + K+ A L IK+
Sbjct: 457 LRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKL 494
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 177/390 (45%), Gaps = 4/390 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKAL-GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
IK + ++ ++IV L G+ +F D + + + KE P + + + +M + + G
Sbjct: 141 IKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKE-FAPSVVSFNTIMSRYCKLG 199
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYN 271
A + +G+ D S N+++ L + A L N M+ + L +++TY
Sbjct: 200 LADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYK 259
Query: 272 IVISGWSKLGQVVEMERVLKEIVA-EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
IV G+ LG + ++++++ EG PD +T++ LI G + G I++A+ + +
Sbjct: 260 IVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLS 319
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
G + Y+ ++S+ G DE ++ M + N +P++ TY+ LI GL K KV
Sbjct: 320 SGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQ 379
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A+++++EM I P++ + L+ LC G A M + + +T Y +++
Sbjct: 380 AIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMID 439
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
G + L+ +++ + +I G C ++ A ++E G P
Sbjct: 440 GYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEP 499
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
S + Y+ L N + + L ++ +
Sbjct: 500 SAVTYTTLMNAYCEEGNINKLHELLLEMNL 529
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 111/254 (43%), Gaps = 1/254 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+L + G+ P T + +M+++ G + K ++L + ++ + VV+ LC
Sbjct: 488 LLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLC 547
Query: 245 QRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
++ + + L M+ K L + +TYN +I + K + + +L +++ P
Sbjct: 548 KQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPA 607
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T++ LI+GL R G ++DA V +++++ AY +I + GD +K + M
Sbjct: 608 TYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQM 667
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
E ++ Y+ +I+ L K + +A F ML G+ P L G
Sbjct: 668 VEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHV 727
Query: 424 HAAMMMYKKARKVG 437
H+ + K G
Sbjct: 728 HSVFELLAVMIKFG 741
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 115/256 (44%), Gaps = 7/256 (2%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+IK + +Y ++ A + + +L +M + + P + T ++V+ +
Sbjct: 491 SIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQR 550
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNV----M 268
++ +++Q+L + GL D + N ++ C C+ + A L + M ++ N+
Sbjct: 551 KLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDM---LIHNLEPTPA 607
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TYN++I G + G V + +RVL + + + ++ +I+ G A++VF M
Sbjct: 608 TYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQM 667
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
EKG Y+AVI+ +E Y+ M S P+ + + +++ ++ V
Sbjct: 668 VEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHV 727
Query: 389 ADALEVFEEMLDRGIV 404
E+ M+ G++
Sbjct: 728 HSVFELLAVMIKFGLL 743
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 98/255 (38%), Gaps = 33/255 (12%)
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISN----------YISVGD--------------- 352
+ DA+ V MKE+ P YN+++ N Y + D
Sbjct: 99 VHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSIIVD 158
Query: 353 -------FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
F + + + + P++ ++ ++S K A F ML GI+P
Sbjct: 159 GLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILP 218
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
T + + L G A+ + K G + + YK++ + G ++
Sbjct: 219 DTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREII 278
Query: 466 HEM-QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+M + G D Y +I G C +G +E A+ + + L GF + ++YS L + L
Sbjct: 279 QKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCK 338
Query: 525 SNKLESAYNLFRKIK 539
+++ A L +++
Sbjct: 339 RGQVDEALQLLYEME 353
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 25/153 (16%)
Query: 96 LLPEERLRGVFLQKLKGKGVIEDA------LWNVNVDLSLDVVGKVVNRGNLSGEAMVLF 149
L P V + L G +EDA L + N++L+ ++ + G+A
Sbjct: 602 LEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDA---- 657
Query: 150 FNWAIK--HPNVAK----DVKSYNVIVKALGRRKFFD----FMCNVLSDMAKEGVNPDLE 199
A+K H V K +K Y+ ++ L +R + + C +LSD GV+PD E
Sbjct: 658 -QRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSD----GVSPDQE 712
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
+++++F RAG V+ ++L + FGL D
Sbjct: 713 IFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 196/409 (47%), Gaps = 5/409 (1%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
V+ ++ G+ S + ++ +YN+I+KAL + D + +M
Sbjct: 166 VLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMP 225
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+ NPD+ T S +M+ + +V +A+ +L ++ G + + NV++ L + +
Sbjct: 226 LKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLS 285
Query: 251 AASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
A+ L ++M KG V N +TYN +I G G++ + +L+++V+ P+ +T+ +
Sbjct: 286 RAAKLVDNMFLKGCVP-NEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTI 344
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I GL + R +D + + +M+E+G + Y+++IS G + ++ +K M+ C
Sbjct: 345 INGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGC 404
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
+PN+ Y I GL + K +A ++ +EML +G +P+ T +S ++ G A++
Sbjct: 405 KPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAIL 464
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++K+ + ++ +LL L G+ L +W M G D Y +I GLC
Sbjct: 465 VWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLC 524
Query: 489 NIGQLENAVLVMEE--SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
++G ++ + + E P + Y+ L N L + L A +L
Sbjct: 525 DVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLL 573
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 164/372 (44%), Gaps = 26/372 (6%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY---KAI 218
D Y +I R+F F+ VL M +EG + T +I + F G+ + +A+
Sbjct: 89 DATFYRLIENYATSREF-HFIHQVLDRMKREG---RVLTETIFILIFKACGKAHLPGEAV 144
Query: 219 QMLGRL-EDFGLKFDAESLNVVLWCLCQR----------LHV-GAASSLFNSMKGKVLFN 266
R+ D K +S N VL + Q LHV GA S F N
Sbjct: 145 NFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQP-------N 197
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
++TYN++I KLGQ+ +E+ + +PD T+S L+ GL + R+D+A+ + D
Sbjct: 198 LLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLD 257
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M+ +GC P+ +N +I GD K M C PN TY LI GL
Sbjct: 258 EMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 317
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
K+ AL + E+M+ VP+ T + + L + + + G K + Y
Sbjct: 318 KLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYS 377
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+ L GK + LW EM E G + +Y I GLC + + A +++E L K
Sbjct: 378 SLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK 437
Query: 507 GFCPSRLVYSKL 518
GF P+ YS L
Sbjct: 438 GFLPNAFTYSSL 449
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 188/414 (45%), Gaps = 7/414 (1%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYN----VIVKALGRRKFFDFMCNVL 186
++ K + +L GEA V FF+ + + VKS+N VI++ F F +V
Sbjct: 129 LIFKACGKAHLPGEA-VNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVF 187
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
+K G P+L T ++++ + + GQ+ +A+ + D + + ++ LC+
Sbjct: 188 GANSK-GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKE 246
Query: 247 LHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
V A L + M+ + L N +T+N++I SK G + +++ + +G P+ +T+
Sbjct: 247 RRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTY 306
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LI GL G++D A+ + + M C P+ Y +I+ + ++ + M
Sbjct: 307 NTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEE 366
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
+ N Y+ LISGL K K +A+ +++EM ++G P+ +F++ LC P
Sbjct: 367 RGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDE 426
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A + ++ G + Y L++ G + +W EM + ++
Sbjct: 427 AEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLN 486
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
GLC G+L A+ V L +G P + YS + L ++ LF +++
Sbjct: 487 GLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQ 540
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 118/256 (46%), Gaps = 3/256 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y I+ L +++ + ++L M + G + S ++ + G+ A+++ +
Sbjct: 340 TYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEM 399
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
+ G K + + LC+ A + M K L N TY+ ++ G+ K G
Sbjct: 400 AEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDS 459
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ V KE++++ + + S L+ GL +GR+ +A+ V+ M +G PD AY+++
Sbjct: 460 QKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSM 519
Query: 344 ISNYISVGDFDECMKYYKGMSSYN--CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
I VG D+ +K + M P++ TY L + L + + A+++ MLD
Sbjct: 520 IKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDE 579
Query: 402 GIVPSTGTITSFLEPL 417
G P + T FLE L
Sbjct: 580 GCDPDSLTCNIFLETL 595
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 27/268 (10%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV Y + L R + D ++L +M +G P+ T S +M F + G K
Sbjct: 406 PNVV----VYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQK 461
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVIS 275
AI + + ++ + +V+L LC+ + A +++ M G+ L +V+ Y+ +I
Sbjct: 462 AILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIK 521
Query: 276 GWSKLGQVVEMERVLKEIVAE--GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
G +G V + ++ E+ + PD +T++ L L R + AI++ ++M ++GC
Sbjct: 522 GLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGC 581
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT---YTRLISGLLKSRKVAD 390
PD+ ++ F E ++ P D L+ LLK +
Sbjct: 582 DPDS----------LTCNIFLETLR-------ERINPPQDGRLFLDELVVRLLKRERKLS 624
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLC 418
AL + EEML R + P T + ++ C
Sbjct: 625 ALRIVEEMLLRFLPPEPSTWSRVIQRTC 652
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 177/375 (47%), Gaps = 4/375 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN +V D ++++M V PD T + ++ G+ A+ +L
Sbjct: 125 DVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVL 181
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ D + ++L C+R A L + M+ K +++TYN+V++G +
Sbjct: 182 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 241
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+V + LK + + G P++++++ +++GL A R +DA E+ M +KGC P+ +
Sbjct: 242 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 301
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +IS G + ++ + + Y C PN +Y L+ K +K+ A+ + M+
Sbjct: 302 NMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 361
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
RG P + + L LC G A+ + + + GC L +Y ++ L+ GK
Sbjct: 362 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE 421
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L+L +EM G D Y + AGLC ++E+A+ + G P+ ++Y+ +
Sbjct: 422 ALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIIL 481
Query: 521 KLLASNKLESAYNLF 535
L + SA +LF
Sbjct: 482 GLCKRRETHSAIDLF 496
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 169/345 (48%), Gaps = 4/345 (1%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
PD+ + ++ + AGQ+ A +++ + ++ DA + N ++ LC R A ++
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAV 180
Query: 256 FNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
+ M + + + +V+TY I++ K + ++L E+ +G +PD +T++ ++ G+ +
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
GR+DDAIE + GC P+T +YN V+ + +++ + M C PN+ T
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 300
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
+ LIS L + V ALEV E++ G P++ + L C AM
Sbjct: 301 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 360
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
GC + +Y LL L G+ + ++L H++++ G Y VI GL G+ +
Sbjct: 361 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 420
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
A+ ++ E + KG P + YS ++ L +++E A F K++
Sbjct: 421 EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ 465
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 175/361 (48%), Gaps = 6/361 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y ++++A +R + +L +M +G PD+ T ++V++ + G+V AI+ L
Sbjct: 192 DVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFL 251
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
L +G + + S N+VL LC A L M K NV+T+N++IS +
Sbjct: 252 KNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRK 311
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G V VL++I G +P+SL+++ L+ + ++D A+ D M +GC PD +Y
Sbjct: 312 GLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSY 371
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +++ G+ D ++ + C P + +Y +I GL K+ K +ALE+ EM+
Sbjct: 372 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 431
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G+ P T ++ LC A+ + K + +G + + Y ++ L +
Sbjct: 432 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS 491
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+DL+ M +G + Y +I GL G ++ A +++E C +V L N
Sbjct: 492 AIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE-----LCSRGVVRKSLIN 546
Query: 521 K 521
K
Sbjct: 547 K 547
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K A + SYN ++ L + +L++M +G+ PD+ T S + R +
Sbjct: 394 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDR 453
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
+ AI+ G+++D G++ + N ++ LC+R +A LF M G + N TY I
Sbjct: 454 IEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 513
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+I G + G + E +L E+ + G SL
Sbjct: 514 LIEGLAYEGLIKEARDLLDELCSRGVVRKSL 544
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 192/405 (47%), Gaps = 19/405 (4%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ LF PNV ++ ++ L R +L M ++G+ P+ T
Sbjct: 169 EALDLFHQMC--KPNVV----TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGT 222
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFG-LKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK 262
++D + G A+ +L ++E+ + + N ++ L + A +LF M+ K
Sbjct: 223 IVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEK 282
Query: 263 VLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
+F +++TYN +I+G+ G+ + E++L+E++ +PD +TFS LI + G+ +A
Sbjct: 283 EIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEA 342
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
E++D M + P T Y+++I + D + + C P++ T+ LI+G
Sbjct: 343 EELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAG 402
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
++++V D +++ EM + G+V +T T T+ + C G +AA + ++ G +
Sbjct: 403 YCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPN 462
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQES-----------GYPSDGEIYEYVIAGLCNI 490
+ LL L GK L+++ MQ+S G D + Y +I GL N
Sbjct: 463 VVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINE 522
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
G+ A + EE +G P + YS + + L ++L+ A +F
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 567
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 175/386 (45%), Gaps = 39/386 (10%)
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
+ +I+M F ++ A+ G++ G + N +L LC + A LF+ M
Sbjct: 118 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM 177
Query: 260 KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF-------------- 305
NV+T+ +++G + G+VVE +L ++ +G P+ +T+
Sbjct: 178 CKP---NVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTV 234
Query: 306 ----------------------SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ +I+GL + GR DA +F M+EK PD YN +
Sbjct: 235 SALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCM 294
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I+ + G + + + + M P++ T++ LI+ +K K +A E+++EML R I
Sbjct: 295 INGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSI 354
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+PST T +S ++ C AA M+ GC + + L+ + +
Sbjct: 355 IPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIK 414
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L HEM E+G ++ Y +I G C +G L A +++E + G CP+ + + L + L
Sbjct: 415 LLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLC 474
Query: 524 ASNKLESAYNLFRKIKIARQNDYARR 549
+ KL+ A +F+ ++ ++ + A R
Sbjct: 475 DNGKLKDALEMFKAMQKSKMDIDASR 500
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 191/404 (47%), Gaps = 20/404 (4%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ + D+ +YN ++ + +L +M + +NPD+ T S ++++F++ G+
Sbjct: 279 MQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGK 338
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF--NSMKGKVLFNVMTYN 271
++A ++ + + + + ++ C++ + AA +F KG +++T+N
Sbjct: 339 FFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKG-CSPDIITFN 397
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I+G+ + +V + ++L E+ G +++T++ LI G + G ++ A ++ M
Sbjct: 398 TLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISS 457
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMS----------SYN-CEPNMDTYTRLIS 380
G P+ N ++ G + ++ +K M +N EP++ TY LI
Sbjct: 458 GVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILIC 517
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
GL+ K +A E++EEM RGIVP T T +S ++ LC A M+
Sbjct: 518 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 577
Query: 441 SLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
+ + L ++G+ K GM+ L+L+ EM + G +D Y +I G + ++ A+
Sbjct: 578 DVVTFNTL---ITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGAL 634
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
+ +E + G P + + L + +LE A + ++++
Sbjct: 635 DIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQMS 678
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 119/274 (43%), Gaps = 40/274 (14%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N ++ I++ + ++ +I GF P +TF+ L+ GL RI +A+++F
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLF 174
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
M C+PN+ T+T L++GL +
Sbjct: 175 HQM---------------------------------------CKPNVVTFTTLMNGLCRE 195
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL-SLTA 444
+V +A+ + + ML+ G+ P+ T + ++ +C G +A+ + +K +V + ++
Sbjct: 196 GRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVI 255
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y ++ L G+ +L+ EMQE D Y +I G C G+ +A +++E L
Sbjct: 256 YNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEML 315
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ P + +S L N + K A L+ ++
Sbjct: 316 ERKINPDVVTFSALINAFVKEGKFFEAEELYDEM 349
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 82/198 (41%), Gaps = 39/198 (19%)
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+L SG + + + DA+++F M+ +PS + + G P + ++KK +
Sbjct: 51 KLQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEML 110
Query: 437 GCKLSLTAYKLLLR----------RLSGFGKCGML------------------------- 461
+ ++ +L++ LS FGK L
Sbjct: 111 RMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEA 170
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
LDL+H+M + + + ++ GLC G++ AV +++ L G P+++ Y + +
Sbjct: 171 LDLFHQMCKPNVVT----FTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDG 226
Query: 522 LLASNKLESAYNLFRKIK 539
+ SA NL RK++
Sbjct: 227 MCKMGDTVSALNLLRKME 244
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 172/375 (45%), Gaps = 36/375 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN +++ L R D VL DM + G PD+ T +I++++ + +A+++L
Sbjct: 151 DTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLL 210
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKL 280
+ D G D + NVV+ +CQ V A S+ N ++YNIV+ G
Sbjct: 211 DEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTA 270
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ + E+++ E+ +G P+ +TF+ LI L R G ++ A+E+ D + + GC P++ +Y
Sbjct: 271 ERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSY 330
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N ++ + D M + + M S C P++ +Y L++ L + +V A+E+ ++ D
Sbjct: 331 NPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKD 390
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G P L +Y ++ L+ GK
Sbjct: 391 KGCTP-----------------------------------VLISYNTVIDGLTKAGKTEE 415
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L+L +EM G D Y + +GLC G++E A+ + G P+ ++Y+ +
Sbjct: 416 ALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILL 475
Query: 521 KLLASNKLESAYNLF 535
L SA +LF
Sbjct: 476 GLCKRRATHSAIDLF 490
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 172/355 (48%), Gaps = 3/355 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y ++++A +R + +L +M +G PD+ T ++V++ + G+V A++ L
Sbjct: 186 DVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFL 245
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSK 279
L +G + + S N+VL LC A L M KG+ NV+T+N++IS +
Sbjct: 246 KSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRP-PNVVTFNMLISFLCR 304
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G V +L +I G +P+SL+++ ++ + ++D A+ + M GC PD +
Sbjct: 305 RGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVS 364
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YN +++ G+ D ++ + C P + +Y +I GL K+ K +ALE+ EM+
Sbjct: 365 YNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMV 424
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
+G+ P T ++ LC G A+ + K + +G + + Y +L L
Sbjct: 425 TKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATH 484
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+DL+ M +G + Y +I GL G ++ A +M E +G LV
Sbjct: 485 SAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTLV 539
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 191/406 (47%), Gaps = 13/406 (3%)
Query: 135 VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
+V RG+L EA+ L + A P+ A + + A GR VL+
Sbjct: 66 LVRRGDLE-EAIRLVESMAGLEPSAAGPCAALIKKLCASGRTAEAR---RVLAS-----C 116
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
PD+ + + ++ + GQ+ A +++ + ++ D + N ++ LC R A +
Sbjct: 117 EPDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALA 173
Query: 255 LFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
+ + M + + +V+TY I++ K + ++L E+ +G +PD +T++ ++ G+
Sbjct: 174 VLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGIC 233
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+ GR+DDA+E ++ GC P+T +YN V+ + +++ K MS PN+
Sbjct: 234 QEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVV 293
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
T+ LIS L + V A+E+ +++ G P++ + L C AM +
Sbjct: 294 TFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELM 353
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
GC + +Y LL L G+ ++L H++++ G Y VI GL G+
Sbjct: 354 VSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKT 413
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
E A+ ++ E + KG P + YS +S+ L ++E A F K++
Sbjct: 414 EEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQ 459
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 158/318 (49%), Gaps = 12/318 (3%)
Query: 106 FLQKLKGKGVIEDAL-WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
L +++ KG D + +NV VV + G + + F ++ +
Sbjct: 209 LLDEMRDKGCAPDIVTYNV-------VVNGICQEGRVDD---AMEFLKSLPSYGCEPNTV 258
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SYN+++K L + ++ ++++M+++G P++ T ++++ R G V A+++L ++
Sbjct: 259 SYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQI 318
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
+G ++ S N +L C++ + A + M + ++++YN +++ + G+V
Sbjct: 319 PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEV 378
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+L ++ +G +P ++++ +I+GL +AG+ ++A+E+ + M KG PD Y+ +
Sbjct: 379 DAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTI 438
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
S G +E +K + + PN Y ++ GL K R A+++F M+ G
Sbjct: 439 SSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGC 498
Query: 404 VPSTGTITSFLEPLCSYG 421
+P+ T T +E L G
Sbjct: 499 MPNESTYTILIEGLAYEG 516
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 201/441 (45%), Gaps = 26/441 (5%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
L+ + G + DA+ V +L G V L E +++ A DV
Sbjct: 180 ALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLM---------GCAADVN 230
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+++ +V+ + ++ M +G P + T ++ R Q +A MLGR+
Sbjct: 231 TFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRV 290
Query: 225 EDFGLKFDAESLNVVLW------CLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+ LNVVL+ CL + + A+ L+ +M K + TY+I++ G
Sbjct: 291 PE---------LNVVLFNTVIGGCLAEG-KLAEATELYETMGLKGCQPDAHTYSILMHGL 340
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
KLG++ R+L+E+ +GF+P+ +T++ ++ + G DD + + M KG ++
Sbjct: 341 CKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 400
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I G DE M + M S C P++ +Y +I L + ++ +A +FE
Sbjct: 401 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN 460
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+L+ G+V + T + + L G A+ + K+ GC L + +Y L++ + G
Sbjct: 461 LLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGN 520
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L L EM E G + Y +I+ LC ++ +A+ + ++ L +G P + Y+
Sbjct: 521 VDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNT 580
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L N L + +A NL K+
Sbjct: 581 LINGLCKMGWMHAALNLLEKL 601
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 159/328 (48%), Gaps = 4/328 (1%)
Query: 123 VNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFM 182
+NV L V+G + G L+ EA L+ +K D +Y++++ L +
Sbjct: 293 LNVVLFNTVIGGCLAEGKLA-EATELYETMGLK--GCQPDAHTYSILMHGLCKLGRIGSA 349
Query: 183 CNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWC 242
+L +M K+G P++ T +IV+ SF + G +L + GL +++ N +++
Sbjct: 350 VRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYA 409
Query: 243 LCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
LC+ + A L M+ + ++ +YN +I Q+ E E + + ++ EG +
Sbjct: 410 LCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVAN 469
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+T++ +I L R GR DA+ + M GC D +YN +I G+ D + +
Sbjct: 470 GITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLE 529
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M+ +PN +Y LIS L K R+V DALE+ ++ML++G+ P T + + LC G
Sbjct: 530 EMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMG 589
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLL 449
HAA+ + +K + Y +L+
Sbjct: 590 WMHAALNLLEKLHNENVHPDIITYNILI 617
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 135/321 (42%), Gaps = 39/321 (12%)
Query: 254 SLFNSM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
+L+ M + +V T+ + +LG+ E +L+ + G PD++ + +I
Sbjct: 144 ALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHA 203
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
L G + +A + + M GC D N ++ V+ +G E + M + C P
Sbjct: 204 LCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPG 263
Query: 372 MDTYTRLISGLLKSR-------------------------------KVADALEVFEEMLD 400
+ TY L+ GL + R K+A+A E++E M
Sbjct: 264 VMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGL 323
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G P T + + LC G +A+ + ++ K G ++ Y ++L F K GM
Sbjct: 324 KGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLH---SFCKNGM 380
Query: 461 LLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
D L EM G + + Y +I LC G+++ A+ +++E +G P Y+
Sbjct: 381 WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNT 440
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ L + ++E A ++F +
Sbjct: 441 IIYHLCNNEQMEEAEHMFENL 461
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 5/160 (3%)
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTG-TITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
GL ++R+ A ++ M+ R VP T T LC G A+ + + + GC
Sbjct: 136 GLPRARRFA----LYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCV 191
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
Y+ ++ L G L +EM G +D ++ V+ G+C +G++ A +
Sbjct: 192 PDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARL 251
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ + KG P + Y L L + + A + ++
Sbjct: 252 VDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVP 291
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 98/229 (42%), Gaps = 25/229 (10%)
Query: 35 SYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVDE 94
SYN ++ + N + H+ + L + +++ ++ N + + D+ R E
Sbjct: 437 SYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITY-NTIIHALLRDGRWQDAVRLAKE 495
Query: 95 FLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAI 154
+L G L + G+I+ + NVD SL ++ ++ +G I
Sbjct: 496 MIL-----HGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG--------------I 536
Query: 155 KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV 214
K NV SYN+++ L + + + M +G+ PD+ T + +++ + G +
Sbjct: 537 KPNNV-----SYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWM 591
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
+ A+ +L +L + + D + N+++ C+ + A+ L N V
Sbjct: 592 HAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAV 640
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 196/409 (47%), Gaps = 5/409 (1%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
V+ ++ G+ S + ++ +YN+I+KAL + D + +M
Sbjct: 142 VLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMP 201
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+ NPD+ T S +M+ + +V +A+ +L ++ G + + NV++ L + +
Sbjct: 202 LKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLS 261
Query: 251 AASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
A+ L ++M KG V N +TYN +I G G++ + +L+++V+ P+ +T+ +
Sbjct: 262 RAAKLVDNMFLKGCVP-NEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTI 320
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I GL + R +D + + +M+E+G + Y+++IS G + ++ +K M+ C
Sbjct: 321 INGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGC 380
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
+PN+ Y I GL + K +A ++ +EML +G +P+ T +S ++ G A++
Sbjct: 381 KPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAIL 440
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++K+ + ++ +LL L G+ L +W M G D Y +I GLC
Sbjct: 441 VWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLC 500
Query: 489 NIGQLENAVLVMEE--SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
++G ++ + + E P + Y+ L N L + L A +L
Sbjct: 501 DVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLL 549
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 164/372 (44%), Gaps = 26/372 (6%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY---KAI 218
D Y +I R+F F+ VL M +EG + T +I + F G+ + +A+
Sbjct: 65 DATFYRLIENYATSREF-HFIHQVLDRMKREG---RVLTETIFILIFKACGKAHLPGEAV 120
Query: 219 QMLGRL-EDFGLKFDAESLNVVLWCLCQR----------LHV-GAASSLFNSMKGKVLFN 266
R+ D K +S N VL + Q LHV GA S F N
Sbjct: 121 NFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQP-------N 173
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
++TYN++I KLGQ+ +E+ + +PD T+S L+ GL + R+D+A+ + D
Sbjct: 174 LLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLD 233
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M+ +GC P+ +N +I GD K M C PN TY LI GL
Sbjct: 234 EMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 293
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
K+ AL + E+M+ VP+ T + + L + + + G K + Y
Sbjct: 294 KLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYS 353
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+ L GK + LW EM E G + +Y I GLC + + A +++E L K
Sbjct: 354 SLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK 413
Query: 507 GFCPSRLVYSKL 518
GF P+ YS L
Sbjct: 414 GFLPNAFTYSSL 425
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 188/414 (45%), Gaps = 7/414 (1%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYN----VIVKALGRRKFFDFMCNVL 186
++ K + +L GEA V FF+ + + VKS+N VI++ F F +V
Sbjct: 105 LIFKACGKAHLPGEA-VNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVF 163
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
+K G P+L T ++++ + + GQ+ +A+ + D + + ++ LC+
Sbjct: 164 GANSK-GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKE 222
Query: 247 LHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
V A L + M+ + L N +T+N++I SK G + +++ + +G P+ +T+
Sbjct: 223 RRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTY 282
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LI GL G++D A+ + + M C P+ Y +I+ + ++ + M
Sbjct: 283 NTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEE 342
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
+ N Y+ LISGL K K +A+ +++EM ++G P+ +F++ LC P
Sbjct: 343 RGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDE 402
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A + ++ G + Y L++ G + +W EM + ++
Sbjct: 403 AEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLN 462
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
GLC G+L A+ V L +G P + YS + L ++ LF +++
Sbjct: 463 GLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQ 516
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 118/256 (46%), Gaps = 3/256 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y I+ L +++ + ++L M + G + S ++ + G+ A+++ +
Sbjct: 316 TYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEM 375
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
+ G K + + LC+ A + M K L N TY+ ++ G+ K G
Sbjct: 376 AEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDS 435
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ V KE++++ + + S L+ GL +GR+ +A+ V+ M +G PD AY+++
Sbjct: 436 QKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSM 495
Query: 344 ISNYISVGDFDECMKYYKGMSSYN--CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
I VG D+ +K + M P++ TY L + L + + A+++ MLD
Sbjct: 496 IKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDE 555
Query: 402 GIVPSTGTITSFLEPL 417
G P + T FLE L
Sbjct: 556 GCDPDSLTCNIFLETL 571
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 27/268 (10%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV Y + L R + D ++L +M +G P+ T S +M F + G K
Sbjct: 382 PNVV----VYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQK 437
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVIS 275
AI + + ++ + +V+L LC+ + A +++ M G+ L +V+ Y+ +I
Sbjct: 438 AILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIK 497
Query: 276 GWSKLGQVVEMERVLKEIVAE--GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
G +G V + ++ E+ + PD +T++ L L R + AI++ ++M ++GC
Sbjct: 498 GLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGC 557
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT---YTRLISGLLKSRKVAD 390
PD+ ++ F E ++ P D L+ LLK +
Sbjct: 558 DPDS----------LTCNIFLETLR-------ERINPPQDGRLFLDELVVRLLKRERKLS 600
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLC 418
AL + EEML R + P T + ++ C
Sbjct: 601 ALRIVEEMLLRFLPPEPSTWSRVIQRTC 628
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 183/418 (43%), Gaps = 47/418 (11%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +Y ++ R + D + + M +EG P+ T S +++ +G+V +A+ +
Sbjct: 262 DTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFI 321
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS-- 278
+ G+ + + LC + A +F MK K NV TY +ISG
Sbjct: 322 SEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVS 381
Query: 279 --KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+G M R +G P+++T++ L+ L ID A+ VF+ M + GC P+
Sbjct: 382 RMAIGLFHRMSR-------DGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPN 434
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGM---------SSYN-------------------- 367
T++YN +I Y ++GD ++ M M +YN
Sbjct: 435 TSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLE 494
Query: 368 ------CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
C+P+ +YT LISG K K+ A +F EM+DRG+ P+ T T+ + C
Sbjct: 495 LMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDE 554
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
A M ++ ++ GC+ ++ Y +L+ L+ +L M E D Y
Sbjct: 555 KLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYS 614
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
VI GLCN G + A+ + + ++ G P+ YS L L ++E A +F ++K
Sbjct: 615 TVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELK 672
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 178/380 (46%), Gaps = 12/380 (3%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y ++ L + + + + +EG+ P+L + V+++ + G V A ++ ++
Sbjct: 195 TYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKV 254
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
G+K D + ++ C+ + +A +FN M + N TY+ +I+G G+V
Sbjct: 255 FKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRV 314
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E + E+ G P TF+ I L GRI+DA ++F MK+KGC P+ Y ++
Sbjct: 315 NEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSL 374
Query: 344 IS----NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
IS + +++G F MS PN TY L++ L+++ ++ AL VF M
Sbjct: 375 ISGQRVSRMAIGLFHR-------MSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMG 427
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
G +P+T + + C+ G AM M K +L Y ++++ G
Sbjct: 428 KHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTD 487
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ + + M+ +G D Y +I+G C I ++E A + E + +G CP+ + Y+ L
Sbjct: 488 VAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALI 547
Query: 520 NKLLASNKLESAYNLFRKIK 539
+ KL+ A + ++K
Sbjct: 548 SGYCKDEKLDCAARMLERMK 567
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 158/334 (47%), Gaps = 7/334 (2%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M+++GV P+ T + +M+ + ++ A+ + + G + S N ++ C
Sbjct: 391 MSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCT--- 447
Query: 249 VG----AASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
+G A S L N +KG+ ++TYNI+I G+ G RVL+ + A G PD +
Sbjct: 448 IGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWS 507
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
++ LI G + +++ A +F+ M ++G P+ Y A+IS Y D + + M
Sbjct: 508 YTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMK 567
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
C PN+ TY LI GL K + A E+ + ML+ I P T ++ + LC+ G
Sbjct: 568 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIP 627
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A+ M+ K K GC +L Y L++ L G+ +++ E+++ G D Y +I
Sbjct: 628 LALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMI 687
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
G+++ A + E + G P+ Y L
Sbjct: 688 EVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVL 721
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 190/426 (44%), Gaps = 24/426 (5%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
N+ ++ ++ FN KH + SYN +++ + ++L++M K P L
Sbjct: 413 NMEIDSALIVFNMMGKH-GCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLV 471
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
T +I++ + +G AI++L ++ G + D S ++ C+ + AS +FN M
Sbjct: 472 TYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEM 531
Query: 260 KGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+ L N +TY +ISG+ K ++ R+L+ + G P+ T++ LI GL +
Sbjct: 532 MDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNF 591
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
A E+ M E+ PD Y+ VI+ + G ++ + M + C PN+ TY+ L
Sbjct: 592 SGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSL 651
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I L + +V +A E+F E+ +G++P T +E G A + GC
Sbjct: 652 IQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGC 711
Query: 439 KLSLTAYKLLLRRLSG---FGKCGMLLD-------------------LWHEMQESGYPSD 476
+ +L Y +L++ L + K L + L ++ E +
Sbjct: 712 QPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELS 771
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
++Y+ +++ L G+ A + + + CP++ Y LL + K++ A ++F+
Sbjct: 772 RQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFK 831
Query: 537 KIKIAR 542
+ R
Sbjct: 832 HMSDQR 837
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 121/252 (48%), Gaps = 3/252 (1%)
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
+ TY ++ +KL + +I+ EG P+ L ++ +I L + G + DA + +
Sbjct: 193 LFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIIN 252
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
+ + G PDT Y ++I Y D D + + M CEPN TY+ LI+GL S
Sbjct: 253 KVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSG 312
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+V +AL+ EM G++P+ T T+ + LC G A ++ +K GCK ++ Y
Sbjct: 313 RVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYT 372
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L +SG M + L+H M G + Y ++ L ++++A++V +
Sbjct: 373 SL---ISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKH 429
Query: 507 GFCPSRLVYSKL 518
G P+ Y++L
Sbjct: 430 GCLPNTSSYNEL 441
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 165/384 (42%), Gaps = 11/384 (2%)
Query: 114 GVIEDALWNVNVDL-------SLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSY 166
G IEDA W + +D+ ++ +++ +S A+ LF + V + +Y
Sbjct: 347 GRIEDA-WKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHR--MSRDGVVPNTVTY 403
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
N ++ L D V + M K G P+ + + ++ + G KA+ ML +
Sbjct: 404 NALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLK 463
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVE 285
+ N+++ C A + MK + +Y +ISG+ K+ ++
Sbjct: 464 GRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMEL 523
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+ E++ G P+ +T++ LI G + ++D A + + MK GC P+ YN +I
Sbjct: 524 ASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIH 583
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+F + K M P++ TY+ +I+GL + + ALE+F +M+ G +P
Sbjct: 584 GLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLP 643
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
+ T +S ++ L G A M+ + +K G Y ++ GK D
Sbjct: 644 NLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFL 703
Query: 466 HEMQESGYPSDGEIYEYVIAGLCN 489
EM +G + Y+ +I GL N
Sbjct: 704 GEMINAGCQPTLQTYDVLIKGLQN 727
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 158/385 (41%), Gaps = 58/385 (15%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SY ++ + + + ++M G+ P+ T + ++ + + ++ A +ML R+
Sbjct: 507 SYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERM 566
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ G + + ++ NV++ L ++ + A L M + K+ +V+TY+ VI+G G +
Sbjct: 567 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAI 626
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ ++V G P+ T+S LI+ LG+ GR+++A E+F +K++G PD Y +
Sbjct: 627 PLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKM 686
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK------------------- 384
I + G D + M + C+P + TY LI GL
Sbjct: 687 IEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTF 746
Query: 385 ------------------------SRKVADAL--------------EVFEEMLDRGIVPS 406
SR++ DAL ++ M+ + P+
Sbjct: 747 DDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPN 806
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
T FL L AM ++K C+L LT YK L+ L + ++
Sbjct: 807 QDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFE 866
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIG 491
+M +D ++ +I GL G
Sbjct: 867 KMLSRALNADEIVWTILINGLLGAG 891
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 119/257 (46%), Gaps = 17/257 (6%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FN +KH ++ +Y+ +++ALG+ + + S++ K+G+ PD T +++
Sbjct: 632 MFNKMVKH-GCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVC 690
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM 268
+ +G+V +A LG + + G + ++ +V++ L + +L N+ + +
Sbjct: 691 VMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQI 750
Query: 269 TYNIVISGWS-KLGQV-VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
VIS S KL ++ E+ R L + L+ L R+GR +A ++
Sbjct: 751 INKDVISVLSSKLAELDFELSRQL--------------YDALLSRLSRSGRWFEANNLYR 796
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
+M + P+ + Y + + + D M +K MS CE ++ Y LI L +
Sbjct: 797 SMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLH 856
Query: 387 KVADALEVFEEMLDRGI 403
+ +A VFE+ML R +
Sbjct: 857 RRKEARFVFEKMLSRAL 873
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 85/211 (40%)
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
+I+ + A+ D ++G Y ++ + M Y +
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
+PN+ Y +I+ L K V DA + ++ G+ P T T TS + C +A
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++ + + GC+ + Y L+ L G+ LD EM G + I L
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVAL 343
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
C++G++E+A + + +KG P+ Y+ L
Sbjct: 344 CDMGRIEDAWKIFIDMKKKGCKPNVYTYTSL 374
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 48/102 (47%)
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G K+ L Y LL +L+ ++D +H++ G + IY VI LC G + +A
Sbjct: 188 GPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDA 247
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++ + + G P Y+ + + L+SA+ +F ++
Sbjct: 248 ESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRM 289
>gi|326525088|dbj|BAK07814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 181/373 (48%), Gaps = 8/373 (2%)
Query: 149 FFNWAIKHPNVAKDVKS--YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
FF+ + P++ D Y ++ L + F ++L +M + + + + ++
Sbjct: 125 FFHHVV--PSLPADSLPALYAAMIDLLAKHHHFPLARHLLDEMRERSIPVSSQVILAIIR 182
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKF-DAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF 265
++RAG +A ++ R+E++G D L +L L ++ G A +LF+S K
Sbjct: 183 RYVRAGMSPEASELFRRMEEYGAGVPDPAVLASLLGALSKKRLAGEAQALFDSYKSVFPP 242
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V+ Y ++ W + G + + E+V E+ G P+ T++ +I+ + RAG++ A E+
Sbjct: 243 DVVLYTTLVHAWCRAGCLDKAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQELL 302
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI-SGLLK 384
M E GC P+T +NA++ ++ G ++ ++ + M C+P++ TY L+ + K
Sbjct: 303 CQMMETGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGK 362
Query: 385 SRKVAD-ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
+ D A++V +M+ +G +P T L+ + G AA +Y++ +++ CK ++
Sbjct: 363 GQSNLDAAMKVLAKMIAKGCIPDCHTFNPMLKLVLGTGNVEAARRLYERMQELQCKPNVV 422
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
Y LL++ + M+L + +M G + Y +I C G A + E
Sbjct: 423 TYNLLMKLFNKEKSMDMVLRIKKDMDAQGVEPNVNTYGALIESFCGRGNWRRAHATLREM 482
Query: 504 L-RKGFCPSRLVY 515
+ K P++ VY
Sbjct: 483 VEEKSLKPTKPVY 495
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 191/378 (50%), Gaps = 2/378 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V SYN I+ LGR+ D +M K+ + P+L T +I++D +AG++ A+ +
Sbjct: 375 VVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRD 433
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLG 281
++D GL + ++N+++ LC+ + A S+F + K + +TY +I G + G
Sbjct: 434 AMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHG 493
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+V E ++ ++++ P+++ ++ LI + GR +D ++++ M GC PD N
Sbjct: 494 RVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLN 553
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+ G+ ++ ++ + + P+ +YT LI GL+K+ +A E+F M ++
Sbjct: 554 TYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQ 613
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G V T + ++ C G + A + ++ + G + ++ Y ++ L+ +
Sbjct: 614 GCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEA 673
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+ E + G + IY +I G +G+++ A L+MEE ++KG P+ ++ L +
Sbjct: 674 YMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 733
Query: 522 LLASNKLESAYNLFRKIK 539
L+ + ++ A F+ +K
Sbjct: 734 LVKAEEISEALVCFQSMK 751
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 189/375 (50%), Gaps = 15/375 (4%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ ++M + G +PDL L+ MD +AG++ K + +++ G DA S +++ L
Sbjct: 536 IYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLV 595
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ A LF +MK + + + YN VI G+ K G+V + ++L+E+ +G P +
Sbjct: 596 KAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVV 655
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T+ +I+GL + R+D+A +F+ K KG + Y+++I + VG DE + +
Sbjct: 656 TYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 715
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
PN+ T+ L+ L+K+ ++++AL F+ M D P+ T + + LC
Sbjct: 716 MQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKF 775
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIY 480
+ A + +++ +K G K ++ Y + +SG K G +++ L+ + +E G +D IY
Sbjct: 776 NKAFVFWQEMQKQGFKPNVFTYTTM---ISGLAKAGNIVEADTLFEKFKEKGGVADSAIY 832
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK----LSNKLLASNKLESAYNLFR 536
+I GL N + +A + EE+ KG C +Y+K L + L + +E A +
Sbjct: 833 NAIIEGLSNANRASDAYRLFEEARLKG-CS---IYTKTCVVLLDSLHKAECIEQAAIVGA 888
Query: 537 KIKIARQNDYARRLW 551
++ + +A R W
Sbjct: 889 VLRETAKAQHAARSW 903
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 185/422 (43%), Gaps = 37/422 (8%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K ++ DV YNV + G+ D +M G+ D T + ++ +A +
Sbjct: 261 MKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADR 320
Query: 214 VYKAIQ-------------------------MLGRLEDF----------GLKFDAESLNV 238
+ +A++ M G+ ED G S N
Sbjct: 321 LNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNC 380
Query: 239 VLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAE-G 297
+L CL ++ V A F MK + N+ TYNI+I K G++ E V+++ + + G
Sbjct: 381 ILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKL-ETALVVRDAMKDAG 439
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
P+ +T + +++ L +A R+DDA +F+ + K C PD Y ++I G DE
Sbjct: 440 LFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAY 499
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
K Y+ M N PN YT LI K + D +++ EML G P + ++++ +
Sbjct: 500 KLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCV 559
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
G ++++ + +G +Y +L+ L G +L++ M+E G D
Sbjct: 560 FKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDT 619
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
Y VI G C G++ A ++EE KG P+ + Y + + L ++L+ AY LF +
Sbjct: 620 RAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679
Query: 538 IK 539
K
Sbjct: 680 AK 681
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 206/436 (47%), Gaps = 17/436 (3%)
Query: 107 LQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK-- 164
++K G++ D D++ + V+ + + EA+ LF +H + K V
Sbjct: 293 FHEMKANGLVLD-------DVTYTSMIGVLCKADRLNEAVELF-----EHMDQNKQVPCA 340
Query: 165 -SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+YN ++ G F+ ++L ++G P + + + ++ R GQV +A++
Sbjct: 341 YAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEE 400
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQ 282
++ + + + N+++ LC+ + A + ++MK LF NV+T NI++ K +
Sbjct: 401 MKKDAIP-NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQR 459
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ + + + + + PD++T+ LIEGLGR GR+D+A ++++ M + P+ Y +
Sbjct: 460 LDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTS 519
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I N+ G ++ K Y M C P++ + + K+ ++ +F+E+ + G
Sbjct: 520 LIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
+P + T + L G H A ++ ++ GC L AY ++ GK
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
L EM+ G+ Y VI GL I +L+ A ++ EE+ KG + ++YS L +
Sbjct: 640 QLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGF 699
Query: 523 LASNKLESAYNLFRKI 538
+++ AY + ++
Sbjct: 700 GKVGRIDEAYLIMEEL 715
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/489 (21%), Positives = 204/489 (41%), Gaps = 77/489 (15%)
Query: 122 NVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDF 181
N N +L + V+ ++ + N V +F WA + + A ++YN ++ + R + F+
Sbjct: 94 NPNPELVIGVLRRLKDVNN-----AVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNC 148
Query: 182 MCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA------------------------ 217
+ +L +M+ G P T ++ SFI++ ++ +A
Sbjct: 149 LEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIG 208
Query: 218 -----------IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF- 265
+ + ++++ G + ++ + V AA SL + MK L
Sbjct: 209 ALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEP 268
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V+ YN+ I + K G+V + E+ A G D +T++ +I L +A R+++A+E+F
Sbjct: 269 DVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELF 328
Query: 326 DTM-----------------------------------KEKGCGPDTNAYNAVISNYISV 350
+ M + KGC P +YN ++S
Sbjct: 329 EHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRK 388
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
G DE +K ++ M + PN+ TY +I L K+ K+ AL V + M D G+ P+ T+
Sbjct: 389 GQVDEALKKFEEMKK-DAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITV 447
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
++ LC A +++ C+ Y L+ L G+ L+ +M +
Sbjct: 448 NIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLD 507
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
+ + +Y +I G+ E+ + E LR G P L+ + + + + ++E
Sbjct: 508 ANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEK 567
Query: 531 AYNLFRKIK 539
LF++IK
Sbjct: 568 GRALFQEIK 576
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 86/205 (41%)
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
AYN+++ F+ + + MS P+ +T ++ +KSRK+ +A + M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
P+ T+ + L + + ++++ +++G +++ + L+R + G+
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
L L EM+ + D +Y I G+++ A E G + Y+ +
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311
Query: 519 SNKLLASNKLESAYNLFRKIKIARQ 543
L +++L A LF + +Q
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQ 336
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 191/410 (46%), Gaps = 13/410 (3%)
Query: 135 VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
+++R +L + + F I + V ++ +++ L ++ + +E +
Sbjct: 119 LMHRTDLGFSVLAIHFKKGIPYNEV-----TFTTLIRGLFAENKVKDAVHLFKKLVRENI 173
Query: 195 -NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAAS 253
P+ VM+ + G KA +L +E K + + +V+ C+ + A+
Sbjct: 174 CEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGAT 233
Query: 254 SLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
SL N MK K + ++ TY+ +I KL Q + + E++ P+ TF+ +I+GL
Sbjct: 234 SLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL 293
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
+ G+++DA E+ M EKG PD YN +I Y G D + + M + + EP++
Sbjct: 294 CKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDI 353
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
+Y LI+G + +K+ +A++V E+ +G+ PS T L L G +A + +
Sbjct: 354 ISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDE 413
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCN 489
G L + LL G+ K G++ + +H+++ ++ +IY VI GLC
Sbjct: 414 MLSAGHIPDLYTHCTLL---GGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCK 470
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G+L+ A E+ G P + Y+ + + L+ A ++ RK++
Sbjct: 471 NGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKME 520
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 166/364 (45%), Gaps = 14/364 (3%)
Query: 98 PEERLRGVFLQKLKGKG----------VIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMV 147
P E + G + L KG ++E N V+ G L G +
Sbjct: 176 PNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSL 235
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
L +K ++ D+ +Y+ ++ AL + ++ + + +M + P++ T + V+D
Sbjct: 236 L---NEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFN 266
+ G+V A +++ + + G+ D + N+++ R V A +F+SM K + +
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPD 352
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
+++YNI+I+G+++ ++ E +V +EI +G P +T + L+ GL GR A FD
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFD 412
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M G PD + ++ Y G +E M ++ + + N+ YT +I GL K+
Sbjct: 413 EMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNG 472
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
K+ A FE++ G+ P T T+ + C G A M +K GC Y
Sbjct: 473 KLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYN 532
Query: 447 LLLR 450
+++R
Sbjct: 533 VIVR 536
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 161/351 (45%), Gaps = 7/351 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+ ++Y +++ A + D ++L++M ++ + PD+ T S ++D+ + Q +
Sbjct: 212 NTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLF 271
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ + + + N V+ LC+ V A + M K V +V+TYN++I G+
Sbjct: 272 LEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLR 331
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
GQV + ++ + PD ++++ LI G R +ID+A++V + +KG P
Sbjct: 332 GQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTC 391
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N ++ +G ++ M S P++ T+ L+ G K+ V +A+ F ++
Sbjct: 392 NVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLER 451
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
R + T+ ++ LC G A ++K +G + Y + +SG+ + G+
Sbjct: 452 RREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAM---ISGYCQEGL 508
Query: 461 L---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L D+ +M+++G +D Y ++ G ++ +EE K F
Sbjct: 509 LDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSF 559
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 1/258 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V DV +YN+I+ G R D + M + + PD+ + +I+++ + R ++ +A+
Sbjct: 314 VDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAM 373
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
Q+ + GLK + NV+L L + +A + F+ M + ++ T+ ++ G+
Sbjct: 374 QVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGY 433
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G V E ++ + ++ +I+GL + G++D A F+ + G PD
Sbjct: 434 FKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDV 493
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y A+IS Y G DE + M C + TY ++ G L+S KV++ EE
Sbjct: 494 ITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEE 553
Query: 398 MLDRGIVPSTGTITSFLE 415
+ + T+ ++
Sbjct: 554 IAGKSFSFEAATVELLMD 571
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/384 (20%), Positives = 163/384 (42%), Gaps = 2/384 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V S++ ++KA+ K + + ++ ++ K + LSIV++S + +L
Sbjct: 72 VASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLA 131
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--NVMTYNIVISGWSKL 280
G+ ++ + ++ L V A LF + + + N + Y V++G K
Sbjct: 132 IHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKK 191
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + +L+ + P++ T++ +I+ + G +D A + + MK+K PD Y
Sbjct: 192 GHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTY 251
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +I + ++ + M N PN+ T+ +I GL K KV DA E+ M++
Sbjct: 252 STLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIE 311
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G+ P T ++ G A ++ + + +Y +L+ + K
Sbjct: 312 KGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDE 371
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ + E+ + G ++ GL +G+ ++A +E L G P + L
Sbjct: 372 AMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLG 431
Query: 521 KLLASNKLESAYNLFRKIKIARQN 544
+ +E A + F K++ R++
Sbjct: 432 GYFKNGLVEEAMSHFHKLERRRED 455
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 191/378 (50%), Gaps = 2/378 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V SYN I+ LGR+ D +M K+ + P+L T +I++D +AG++ A+ +
Sbjct: 375 VVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRD 433
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLG 281
++D GL + ++N+++ LC+ + A S+F + K + +TY +I G + G
Sbjct: 434 AMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHG 493
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+V E ++ ++++ P+++ ++ LI + GR +D ++++ M GC PD N
Sbjct: 494 RVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLN 553
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+ G+ ++ ++ + + P+ +YT LI GL+K+ +A E+F M ++
Sbjct: 554 TYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQ 613
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G V T + ++ C G + A + ++ + G + ++ Y ++ L+ +
Sbjct: 614 GCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEA 673
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+ E + G + IY +I G +G+++ A L+MEE ++KG P+ ++ L +
Sbjct: 674 YMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 733
Query: 522 LLASNKLESAYNLFRKIK 539
L+ + ++ A F+ +K
Sbjct: 734 LVKAEEISEALVCFQSMK 751
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 189/375 (50%), Gaps = 15/375 (4%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ ++M + G +PDL L+ MD +AG++ K + +++ G DA S +++ L
Sbjct: 536 IYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLV 595
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ A LF +MK + + + YN VI G+ K G+V + ++L+E+ +G P +
Sbjct: 596 KAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVV 655
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T+ +I+GL + R+D+A +F+ K KG + Y+++I + VG DE + +
Sbjct: 656 TYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 715
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
PN+ T+ L+ L+K+ ++++AL F+ M D P+ T + + LC
Sbjct: 716 MQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKF 775
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIY 480
+ A + +++ +K G K ++ Y + +SG K G +++ L+ + +E G +D IY
Sbjct: 776 NKAFVFWQEMQKQGFKPNVFTYTTM---ISGLAKAGNIVEADTLFEKFKEKGGVADSAIY 832
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK----LSNKLLASNKLESAYNLFR 536
+I GL N + +A + EE+ KG C +Y+K L + L + +E A +
Sbjct: 833 NAIIEGLSNANRASDAYRLFEEARLKG-CS---IYTKTCVVLLDSLHKAECIEQAAIVGA 888
Query: 537 KIKIARQNDYARRLW 551
++ + +A R W
Sbjct: 889 VLRETAKAQHAARSW 903
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 185/422 (43%), Gaps = 37/422 (8%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K ++ DV YNV + G+ D +M G+ D T + ++ +A +
Sbjct: 261 MKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADR 320
Query: 214 VYKAIQ-------------------------MLGRLEDF----------GLKFDAESLNV 238
+ +A++ M G+ ED G S N
Sbjct: 321 LNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNC 380
Query: 239 VLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAE-G 297
+L CL ++ V A F MK + N+ TYNI+I K G++ E V+++ + + G
Sbjct: 381 ILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKL-ETALVVRDAMKDAG 439
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
P+ +T + +++ L +A R+DDA +F+ + K C PD Y ++I G DE
Sbjct: 440 LFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAY 499
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
K Y+ M N PN YT LI K + D +++ EML G P + ++++ +
Sbjct: 500 KLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCV 559
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
G ++++ + +G +Y +L+ L G +L++ M+E G D
Sbjct: 560 FKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDT 619
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
Y VI G C G++ A ++EE KG P+ + Y + + L ++L+ AY LF +
Sbjct: 620 RAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679
Query: 538 IK 539
K
Sbjct: 680 AK 681
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 207/437 (47%), Gaps = 17/437 (3%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK- 164
F ++K G++ D D++ + V+ + + EA+ LF +H + K V
Sbjct: 292 FFHEMKANGLVLD-------DVTYTSMIGVLCKADRLNEAVELF-----EHMDQNKQVPC 339
Query: 165 --SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+YN ++ G F+ ++L ++G P + + + ++ R GQV +A++
Sbjct: 340 AYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFE 399
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLG 281
++ + + + N+++ LC+ + A + ++MK LF NV+T NI++ K
Sbjct: 400 EMKKDAIP-NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQ 458
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ + + + + + PD++T+ LIEGLGR GR+D+A ++++ M + P+ Y
Sbjct: 459 RLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYT 518
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++I N+ G ++ K Y M C P++ + + K+ ++ +F+E+ +
Sbjct: 519 SLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNL 578
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G +P + T + L G H A ++ ++ GC L AY ++ GK
Sbjct: 579 GFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKA 638
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L EM+ G+ Y VI GL I +L+ A ++ EE+ KG + ++YS L +
Sbjct: 639 YQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDG 698
Query: 522 LLASNKLESAYNLFRKI 538
+++ AY + ++
Sbjct: 699 FGKVGRIDEAYLIMEEL 715
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 105/489 (21%), Positives = 204/489 (41%), Gaps = 77/489 (15%)
Query: 122 NVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDF 181
N N +L + V+ ++ + N V +F WA + + A ++YN ++ + R + F+
Sbjct: 94 NPNPELVIGVLRRLKDVNN-----AVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNC 148
Query: 182 MCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA------------------------ 217
+ +L +M+ G P T ++ SFI++ ++ +A
Sbjct: 149 LEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIG 208
Query: 218 -----------IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF- 265
+ + ++++ G + ++ + V AA SL + MK L
Sbjct: 209 ALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEP 268
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V+ YN+ I + K G+V + E+ A G D +T++ +I L +A R+++A+E+F
Sbjct: 269 DVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELF 328
Query: 326 DTM-----------------------------------KEKGCGPDTNAYNAVISNYISV 350
+ M + KGC P +YN ++S
Sbjct: 329 EHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRK 388
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
G DE +K ++ M + PN+ TY +I L K+ K+ AL V + M D G+ P+ T+
Sbjct: 389 GQVDEALKKFEEMKK-DAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITV 447
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
++ LC A +++ C+ Y L+ L G+ L+ +M +
Sbjct: 448 NIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLD 507
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
+ + +Y +I G+ E+ + E LR G P L+ + + + + ++E
Sbjct: 508 ANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEK 567
Query: 531 AYNLFRKIK 539
LF++IK
Sbjct: 568 GRALFQEIK 576
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 86/205 (41%)
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
AYN+++ F+ + + MS P+ +T ++ +KSRK+ +A + M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
P+ T+ + L + + ++++ +++G +++ + L+R + G+
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
L L EM+ + D +Y I G+++ A E G + Y+ +
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311
Query: 519 SNKLLASNKLESAYNLFRKIKIARQ 543
L +++L A LF + +Q
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQ 336
>gi|356499253|ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Glycine max]
Length = 510
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 196/452 (43%), Gaps = 13/452 (2%)
Query: 100 ERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNV 159
E + + LQ E L + L+ ++ + R + + F++A PN
Sbjct: 38 ELISKLLLQHHNPFHATESPLQLHGITLTPTLLFHTLLRLKNHSKIALSLFHYAKTLPNP 97
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDM-AKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
S+ +++ + + + FD ++ +M + + P T ++ I AG +A+
Sbjct: 98 PLSHSSFTLLIDTMAKVRQFDVAWQLIVEMDQRHHLTPTPSTFLTLIRRLICAGLTRQAV 157
Query: 219 QMLGRLEDFG-LKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGW 277
+ ++ F K + V+L LC+ HV A +FN K V Y ++I GW
Sbjct: 158 RAFHDIDAFSETKTTPQDFCVLLDTLCKYGHVRLAVEVFNKNKHTFPPTVKMYTVLIYGW 217
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA----------GRIDDAIEVFDT 327
K+G++ + L E++ +G P+ +T++ L+ G+ R I +A EVFD
Sbjct: 218 CKIGRIKTAQSFLNEMIDKGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRNAEEVFDQ 277
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M+E G PD +++ ++ Y + M PN+ YT +I L
Sbjct: 278 MRESGIEPDVTSFSILLHVYSRAHKPQLVLDKLSLMKEKGICPNVVMYTSVIKCLASCGW 337
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG-CKLSLTAYK 446
+ DA + EM+ G+ P T F + +A+ M+K+ ++ G C S Y
Sbjct: 338 LEDAERLLGEMVRDGVSPCAATYNCFFKEFRGRKDGESALRMFKRMKEDGLCMPSSHTYV 397
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
+L+R ++ ++W +M+E+G D ++Y +I GLC + A E +
Sbjct: 398 ILIRMFLRLDMIKVVKEIWQDMKETGAGPDLDLYTVLIHGLCERQRWREACHYFVEMIEN 457
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GF P + + L L+ ++ L + L +K+
Sbjct: 458 GFLPLKGTFESLYRGLIQADMLRTWRRLKKKL 489
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 129/316 (40%), Gaps = 35/316 (11%)
Query: 248 HVGAASSLFNSMKGKVLFNVM----TYNIVISGWSKLGQ-------VVEMERVLKEIVAE 296
H A SLF+ K L N ++ ++I +K+ Q +VEM++
Sbjct: 80 HSKIALSLFHY--AKTLPNPPLSHSSFTLLIDTMAKVRQFDVAWQLIVEMDQ------RH 131
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVF---DTMKEKGCGPDTNAYNAVISNYISVGDF 353
+P TF LI L AG A+ F D E P + ++ G
Sbjct: 132 HLTPTPSTFLTLIRRLICAGLTRQAVRAFHDIDAFSETKTTP--QDFCVLLDTLCKYGHV 189
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
++ + + + P + YT LI G K ++ A EM+D+GI P+ T
Sbjct: 190 RLAVEVFNK-NKHTFPPTVKMYTVLIYGWCKIGRIKTAQSFLNEMIDKGIEPNVVTYNVL 248
Query: 414 LEPLCSYGPPHA----------AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
L +C H A ++ + R+ G + +T++ +LL S K ++LD
Sbjct: 249 LNGVCRKVSLHPEERFERTIRNAEEVFDQMRESGIEPDVTSFSILLHVYSRAHKPQLVLD 308
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
M+E G + +Y VI L + G LE+A ++ E +R G P Y+ +
Sbjct: 309 KLSLMKEKGICPNVVMYTSVIKCLASCGWLEDAERLLGEMVRDGVSPCAATYNCFFKEFR 368
Query: 524 ASNKLESAYNLFRKIK 539
ESA +F+++K
Sbjct: 369 GRKDGESALRMFKRMK 384
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 78/172 (45%), Gaps = 3/172 (1%)
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRG-IVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
++T LI + K R+ A ++ EM R + P+ T + + L G A+ +
Sbjct: 103 SFTLLIDTMAKVRQFDVAWQLIVEMDQRHHLTPTPSTFLTLIRRLICAGLTRQAVRAFHD 162
Query: 433 ARKVG-CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
K + + +LL L +G + ++++++ + + +P ++Y +I G C IG
Sbjct: 163 IDAFSETKTTPQDFCVLLDTLCKYGHVRLAVEVFNKNKHT-FPPTVKMYTVLIYGWCKIG 221
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
+++ A + E + KG P+ + Y+ L N + L R I+ A +
Sbjct: 222 RIKTAQSFLNEMIDKGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRNAEE 273
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 181/382 (47%), Gaps = 1/382 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ A ++ ++N ++ L R F+ + VL+ M++ G PD+ + ++D + G + A
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
++L R+ +GLK + N VL LC A L + M K + +T+NI++
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ + G V + +L+++++ G PD +T++ +I G + G ID+A+ + +M GC P+
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
T +Y V+ S G + + + M C PN T+ LI+ L K V A+E+ +
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+ML G P + ++ ++ L G A+ + G + Y + LS G
Sbjct: 486 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ ++ ++ ++++ SD +Y VI+ LC + + A+ + G P+ Y+
Sbjct: 546 RVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 605
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
L L + + A L ++
Sbjct: 606 MLIKGLASEGLAKEAQELLSEL 627
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 172/371 (46%), Gaps = 1/371 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y+VI++A R F VL M +G D ++V+++ G V +A+ +L +L
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVV 284
FG + D S N VL LC G L + M + N++T+N +I + G
Sbjct: 209 FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFE 268
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ VL ++ G +PD ++ +I+G+ + G ++ A E+ + M G P+ YN V+
Sbjct: 269 RVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVL 328
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
S + E + M +C + T+ L+ ++ V +E+ E+ML G +
Sbjct: 329 KGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCM 388
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P T T+ + C G A+M+ K GCK + +Y ++L+ L G+ +L
Sbjct: 389 PDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEEL 448
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+M + G P + + +I LC G +E A+ ++++ L G P + YS + + L
Sbjct: 449 MSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK 508
Query: 525 SNKLESAYNLF 535
+ K E A L
Sbjct: 509 AGKTEEALELL 519
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 165/345 (47%), Gaps = 2/345 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ SYN ++K L K + + ++ +M + P++ T + ++ R G + ++L
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVL 274
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
++ + G D ++ +C+ H+ A+ + N M L NV+ YN V+ G
Sbjct: 275 AQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSA 334
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ E E +L E+ + D +TF+ L++ + G +D IE+ + M GC PD Y
Sbjct: 335 ERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
VI+ + G DE + K MSS C+PN +YT ++ GL + + DA E+ +M+
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G P+ T + + LC G A+ + K+ GC L +Y ++ L GK
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+L + M G + IY + L G++ N V+ M ++++
Sbjct: 515 ALELLNVMVNKGISPNTIIYSSIACALSREGRV-NKVIQMFDNIK 558
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 111/245 (45%), Gaps = 1/245 (0%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N T+ V+ G G++ + VL E+ +G +P + ++E R+G +++ V
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ M KGC DT N V++ G DE + + ++ + CE ++ +Y ++ GL +
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
++ D E+ +EM+ P+ T + + LC G + + + GC + Y
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
++ + G + ++ + M G + Y V+ GLC+ + + A ++ E +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349
Query: 506 KGFCP 510
K CP
Sbjct: 350 KD-CP 353
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 106/272 (38%), Gaps = 38/272 (13%)
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V+ YN +++G+ + GQ+ R+ + P++ TF ++ GL GRI DA+EV D
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M KGC P Y+ ++ G F
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFR-------------------------------- 163
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+++ V E M +G TG L +C G A+ + +K GC+ + +Y
Sbjct: 164 ---NSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYN 220
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
+L+ L + G + +L EM + + +I LC G E V+ +
Sbjct: 221 AVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P +Y+ + + + LE A + ++
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 179/383 (46%), Gaps = 3/383 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
V+ +V +YN++++ D + M +G P++ T + ++D + + ++
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVIS 275
++L + GL+ + S NVV+ LC+ + S + M +G L V TYN +I
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV-TYNTLIK 318
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G+ K G + + E++ G +P +T++ LI + +AG ++ A+E D M+ +G P
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP 378
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+ Y ++ + G +E + + M+ P++ TY LI+G + K+ DA+ V
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 438
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
E+M ++G+ P + ++ L C A+ + ++ + G K Y L++
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
+ DL+ EM G P D Y +I C G LE A+ + E + KG P + Y
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY 558
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
S L N L ++ A L K+
Sbjct: 559 SVLINGLNKQSRTREAKRLLLKL 581
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 182/375 (48%), Gaps = 2/375 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ-VYKAIQMLGRL 224
++++VK+ R D +++ G P + + + V+D+ IR+ + + A + +
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
+ + + + N+++ C ++ A +LF+ M+ K L NV+TYN +I G+ KL ++
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ ++L+ + +G P+ ++++ +I GL R GR+ + V M +G D YN +
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I Y G+F + + + M + P++ TYT LI + K+ + A+E ++M RG+
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T T+ ++ G + A + ++ G S+ Y L+ GK +
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ +M+E G D Y V++G C ++ A+ V E + KG P + YS L
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 524 ASNKLESAYNLFRKI 538
+ + A +L+ ++
Sbjct: 497 EQRRTKEACDLYEEM 511
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 183/400 (45%), Gaps = 23/400 (5%)
Query: 144 EAMVL-FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
+A++L F NWA +P+ ++ + + L + K + + D+A + ++ + +L
Sbjct: 62 QALILKFLNWA--NPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASL- 118
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESL-NVVLWCLCQRLHVGAASSLFNSMKG 261
V+K++Q E + L + S+ ++V+ + + A S+ + +
Sbjct: 119 -----------VFKSLQ-----ETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQA 162
Query: 262 K-VLFNVMTYNIVISGWSKLGQVVEM-ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
+ V++YN V+ + + + E V KE++ SP+ T++ LI G AG ID
Sbjct: 163 HGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNID 222
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
A+ +FD M+ KGC P+ YN +I Y + D+ K + M+ EPN+ +Y +I
Sbjct: 223 VALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVI 282
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
+GL + ++ + V EM RG T + ++ C G H A++M+ + + G
Sbjct: 283 NGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT 342
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
S+ Y L+ + G ++ +M+ G + Y ++ G G + A V
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ E GF PS + Y+ L N + K+E A + +K
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 27/350 (7%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +Y ++ ++ + + L M G+ P+ T + ++D F + G + +A ++L
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLG 281
+ D G + N ++ C + A ++ MK K L +V++Y+ V+SG+ +
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
V E RV +E+V +G PD++T+S LI+G R +A ++++ M G PD Y
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A+I+ Y GD ++ ++ + M P++ TY+ LI+GL K + +A + ++
Sbjct: 525 ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYE 584
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
VPS T + +E S +K ++ + GF GM+
Sbjct: 585 ESVPSDVTYHTLIE-----------------------NCSNIEFKSVVSLIKGFCMKGMM 621
Query: 462 LD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ ++ M + DG Y +I G C G + A + +E ++ GF
Sbjct: 622 TEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 114/262 (43%), Gaps = 16/262 (6%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K ++ DV SY+ ++ R D V +M ++G+ PD T S ++ F +
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
+A + + GL D + ++ C + A L N M K VL +V+TY++
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE---------------GLGRAGR 317
+I+G +K + E +R+L ++ E P +T+ LIE G G
Sbjct: 561 LINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGM 620
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
+ +A +VF++M K PD AYN +I + GD + YK M + T
Sbjct: 621 MTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIA 680
Query: 378 LISGLLKSRKVADALEVFEEML 399
L+ L K KV + V +L
Sbjct: 681 LVKALHKEGKVNELNSVIVHVL 702
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 128/303 (42%), Gaps = 9/303 (2%)
Query: 239 VLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
L C C LH+ L+ + ++L + + ++ L + + L+E +
Sbjct: 79 TLRCKCITLHILTKFKLYKT--AQILAEDVAAKTLDDEYASL-----VFKSLQETYDLCY 131
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI-SVGDFDECM 357
S S+ F +++ R ID A+ + + G P +YNAV+ I S +
Sbjct: 132 STSSV-FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAE 190
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+K M PN+ TY LI G + + AL +F++M +G +P+ T + ++
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
C + + G + +L +Y +++ L G+ + + EM GY D
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
Y +I G C G A+++ E LR G PS + Y+ L + + + + A +
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 538 IKI 540
+++
Sbjct: 371 MRV 373
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 182/382 (47%), Gaps = 1/382 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D+ ++N+++ ++L M K G PD T+ +++ F R +V A+
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ ++ + G K D + N ++ LC+ V A F ++ K + NV+TY +++G
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ + R+L +++ + +P+ +T+S L++ + G++ +A E+F+ M PD
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y+++I+ DE + + M S C ++ +Y LI+G K+++V D +++F E
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M RG+V +T T + ++ G A + + G + Y +LL L G+
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L ++ +MQ+ D Y VI G+C G++E A + KG P + Y+
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475
Query: 518 LSNKLLASNKLESAYNLFRKIK 539
+ + L L L+ K+K
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMK 497
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 190/393 (48%), Gaps = 3/393 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF + P + +N ++ A+ + K +D + ++ M G+ DL T +I
Sbjct: 68 DAIDLFSDMVKSRP--FPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
V++ F QV A+ +LG++ G + D ++ ++ C+R V A SL + M +
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+++ YN +I K +V + KEI +G P+ +T++ L+ GL + R DA
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+ M +K P+ Y+A++ ++ G E + ++ M + +P++ TY+ LI+GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
++ +A ++F+ M+ +G + + + + C M ++++ + G +
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L++ G + + +M G D Y ++ GLC+ G+LE A+++ E+
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
++ + Y+ + + + K+E A++LF
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 152/294 (51%), Gaps = 6/294 (2%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
I+ + +V +Y +V L + +LSDM K+ + P++ T S ++D+F++ G+
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
V +A ++ + + D + + ++ LC + A+ +F+ M K L +V++YN
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I+G+ K +V + ++ +E+ G +++T++ LI+G +AG +D A E F M G
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD YN ++ G+ ++ + ++ M + ++ TYT +I G+ K+ KV +A
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG-----CKLS 441
+F + +G+ P T T+ + LC+ G H +Y K ++ G C LS
Sbjct: 456 SLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 140/355 (39%), Gaps = 69/355 (19%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
++ SDM K P + + ++ + ++ + I + ++E G++ D + N+V+ C
Sbjct: 71 DLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 130
Query: 244 CQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
C V A S+ LG+++++ G+ PD +
Sbjct: 131 CCCFQVSLALSI------------------------LGKMLKL----------GYEPDRV 156
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T L+ G R R+ DA+ + D M E G PD AYNA+
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI-------------------- 196
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
I L K+++V DA + F+E+ +GI P+ T T+ + LC+
Sbjct: 197 ---------------IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A + K ++ Y LL GK +L+ EM D Y +
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
I GLC +++ A + + + KG + Y+ L N + ++E LFR++
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 102/225 (45%)
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
R +++DAI++F M + P +N ++S + + +D + K M ++
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
T+ +I+ +V+ AL + +ML G P TI S + C A+ + K
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
++G K + AY ++ L + D + E++ G + Y ++ GLCN +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+A ++ + ++K P+ + YS L + + + K+ A LF ++
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 76/167 (45%)
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
D RL L+ K+ DA+++F +M+ PS L + + + KK
Sbjct: 51 DLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKK 110
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+G + L + +++ + + L + +M + GY D ++ G C +
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ +AV ++++ + G+ P + Y+ + + L + ++ A++ F++I+
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE 217
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 181/382 (47%), Gaps = 1/382 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ A ++ ++N ++ L R F+ + VL+ M++ G PD+ + ++D + G + A
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
++L R+ +GLK + N VL LC A L + M K + +T+NI++
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ + G V + +L+++++ G PD +T++ +I G + G ID+A+ + +M GC P+
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
T +Y V+ S G + + + M C PN T+ LI+ L K V A+E+ +
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+ML G P + ++ ++ L G A+ + G + Y + LS G
Sbjct: 486 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ ++ ++ ++++ SD +Y VI+ LC + + A+ + G P+ Y+
Sbjct: 546 RVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 605
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
L L + + A L ++
Sbjct: 606 MLIKGLASEGLAKEAQELLSEL 627
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 165/345 (47%), Gaps = 2/345 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ SYN ++K L K + + ++ +M + P++ T + ++ R G + ++L
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVL 274
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
++ + G D ++ +C+ H+ A+ + N M L NV+ YN V+ G
Sbjct: 275 AQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSA 334
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ E E +L E+ + D +TF+ L++ + G +D IE+ + M GC PD Y
Sbjct: 335 ERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
VI+ + G DE + K MSS C+PN +YT ++ GL + + DA E+ +M+
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G P+ T + + LC G A+ + K+ GC L +Y ++ L GK
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+L + M G + IY + L G++ N V+ M ++++
Sbjct: 515 ALELLNVMVNKGISPNTIIYSSIACALSREGRV-NKVIQMFDNIK 558
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 172/371 (46%), Gaps = 1/371 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y+VI++A R F VL M +G D ++V+++ G V +A+ +L +L
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVV 284
FG + D S N VL LC G L + M + N++T+N +I + G
Sbjct: 209 FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFE 268
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ VL ++ G +PD ++ +I+G+ + G ++ A E+ + M G P+ YN V+
Sbjct: 269 RVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVL 328
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
S + E + M +C + T+ L+ ++ V +E+ E+ML G +
Sbjct: 329 KGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCM 388
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P T T+ + C G A+M+ K GCK + +Y ++L+ L G+ +L
Sbjct: 389 PDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEEL 448
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+M + G P + + +I LC G +E A+ ++++ L G P + YS + + L
Sbjct: 449 MSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK 508
Query: 525 SNKLESAYNLF 535
+ K E A L
Sbjct: 509 AGKTEEALELL 519
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 111/245 (45%), Gaps = 1/245 (0%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N T+ V+ G G++ + VL E+ +G +P + ++E R+G +++ V
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ M KGC DT N V++ G DE + + ++ + CE ++ +Y ++ GL +
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
++ D E+ +EM+ P+ T + + LC G + + + GC + Y
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
++ + G + ++ + M G + Y V+ GLC+ + + A ++ E +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349
Query: 506 KGFCP 510
K CP
Sbjct: 350 KD-CP 353
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 106/272 (38%), Gaps = 38/272 (13%)
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V+ YN +++G+ + GQ+ R+ + P++ TF ++ GL GRI DA+EV D
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M KGC P Y+ ++ G F
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFR-------------------------------- 163
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+++ V E M +G TG L +C G A+ + +K GC+ + +Y
Sbjct: 164 ---NSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYN 220
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
+L+ L + G + +L EM + + +I LC G E V+ +
Sbjct: 221 AVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P +Y+ + + + LE A + ++
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 193/378 (51%), Gaps = 2/378 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +YN I+ LG+++ + + +M ++ V P++ T +I++D R G++ A+++
Sbjct: 125 VIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRD 183
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLG 281
+E GL + ++N+++ LC+ + A S+F M KV N +T++ +I G K G
Sbjct: 184 DMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCG 243
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+V + + ++++ G P ++ ++ LI + GR +D +++ M GC PD N
Sbjct: 244 RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLIN 303
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+ G+ ++ ++ ++++ P+ +Y+ LI GL+K+ + E+F M ++
Sbjct: 304 TYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQ 363
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G V T + ++ C G + A + ++ + G ++ Y ++ L+ +
Sbjct: 364 GCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEA 423
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+ E + +G + +Y +I G +G+++ A L+MEE ++KG P+ ++ L +
Sbjct: 424 YMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 483
Query: 522 LLASNKLESAYNLFRKIK 539
L+ + ++ A F+ +K
Sbjct: 484 LVKAEEINEALICFQSMK 501
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 154/329 (46%)
Query: 211 AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTY 270
AG+ +A +L R + G + N +L CL ++ V A +F MK + NV TY
Sbjct: 103 AGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTY 162
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
NI+I + G++ + ++ G P+ LT + +I+ L +A ++++A +F+ M +
Sbjct: 163 NILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDD 222
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
K C P+ ++++I G D+ Y+ M P YT LI K + D
Sbjct: 223 KVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKED 282
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
++++EM+ G P I ++++ + G ++++ G +Y +L+
Sbjct: 283 GHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIH 342
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
L G +L++ M+E G D Y VI G C G++ A ++EE KG P
Sbjct: 343 GLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPP 402
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + Y + + L ++L+ AY LF + K
Sbjct: 403 TVVTYGSVIDGLAKIDRLDEAYMLFEEAK 431
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 176/375 (46%), Gaps = 2/375 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ G FD +L +G P + + ++ + +V +A+++ +
Sbjct: 92 AYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM 151
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
+ + + + N+++ LC+ + AA + + M+ LF NV+T NI+I K ++
Sbjct: 152 KRDAVP-NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKL 210
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E + + + + +P+++TFS LI+GLG+ GR+DDA +++ M + G P Y ++
Sbjct: 211 EEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSL 270
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I ++ G ++ K YK M C P++ + + K+ + +F E+ G
Sbjct: 271 IRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGF 330
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+P + + + L G + ++ ++ GC L AY ++ GK
Sbjct: 331 IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQ 390
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L EM+ G+P Y VI GL I +L+ A ++ EE+ G + +VYS L +
Sbjct: 391 LLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFG 450
Query: 524 ASNKLESAYNLFRKI 538
+++ AY + ++
Sbjct: 451 KVGRIDEAYLIMEEL 465
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/462 (22%), Positives = 195/462 (42%), Gaps = 71/462 (15%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ +V +YN+++ L R + + DM + G+ P++ T++I++D +A ++ +A
Sbjct: 154 DAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEA 213
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------KGKVLFNVMTYN 271
+ ++D +A + + ++ L + V A SL+ M G +++ + +
Sbjct: 214 CSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRS 273
Query: 272 ----------------IVISGWS--------------KLGQVVEMERVLKEIVAEGFSPD 301
+V +G S K G+ + + +EI A GF PD
Sbjct: 274 FFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPD 333
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+ ++S LI GL +AG ++ E+F MKE+GC DT+AYNAVI + G ++ + +
Sbjct: 334 ARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLE 393
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF-------------------------- 395
M P + TY +I GL K ++ +A +F
Sbjct: 394 EMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVG 453
Query: 396 ---------EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
EE++ +G+ P+ T L+ L + A++ ++ + + C + Y
Sbjct: 454 RIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYS 513
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
+L+ L K W EMQ+ G + Y +I+GL G + A +
Sbjct: 514 ILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKAN 573
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYAR 548
G P Y+ + L ++NK AY LF + ++ N + +
Sbjct: 574 GGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTK 615
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 148/292 (50%), Gaps = 1/292 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +SY++++ L + + + M ++G D + V+D F ++G+V KA Q+L
Sbjct: 333 DARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLL 392
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++ G + V+ L + + A LF K + NV+ Y+ +I G+ K+
Sbjct: 393 EEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKV 452
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ E +++E++ +G +P+ T++ L++ L +A I++A+ F +MK+ C P+ Y
Sbjct: 453 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITY 512
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +I+ V F++ +++ M +PN TYT +ISGL K+ + +A +F
Sbjct: 513 SILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKA 572
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
G +P + + + +E L S A ++++ R GC + +LL L
Sbjct: 573 NGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDAL 624
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 117/251 (46%), Gaps = 11/251 (4%)
Query: 298 FSPDSLTFSFLIEGLG----------RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
F P ++ LI +G +A R+D+A+E+F+ +++ P AYN +I Y
Sbjct: 41 FRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGY 100
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
S G FDE + + P++ Y +++ L K R+V +AL +FEEM R VP+
Sbjct: 101 GSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNV 159
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T ++ LC G +AA+ + + G ++ +++ RL K ++
Sbjct: 160 PTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEG 219
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
M + + + +I GL G++++A + E+ L G P +VY+ L +
Sbjct: 220 MDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGR 279
Query: 528 LESAYNLFRKI 538
E + +++++
Sbjct: 280 KEDGHKIYKEM 290
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 133/290 (45%), Gaps = 11/290 (3%)
Query: 252 ASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
A S + + GKV ++ + V+ ++L + VE+ +++ P + ++ +I G
Sbjct: 44 AFSAYTILIGKVGL-MLLFPWVLCKANRLDEAVEL---FEQLEQNRKVPCAYAYNTMIMG 99
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
G AG+ D+A + + K KG P AYN +++ +E ++ ++ M + PN
Sbjct: 100 YGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR-DAVPN 158
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+ TY LI L + K+ ALE+ ++M G+ P+ T+ ++ LC A +++
Sbjct: 159 VPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFE 218
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLC 488
C + + L + G GKCG + D L+ +M + G+ +Y +I
Sbjct: 219 GMDDKVCTPNAVTFSSL---IDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFF 275
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G+ E+ + +E + G P + + + + + + E LFR+I
Sbjct: 276 KCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREI 325
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 108/237 (45%), Gaps = 4/237 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HP V +Y ++ L + D + + G+ ++ S ++D F + G++
Sbjct: 400 HPPT---VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRID 456
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVI 274
+A ++ L GL + + N +L L + + A F SMK K N +TY+I+I
Sbjct: 457 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILI 516
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G ++ + + +E+ G P+++T++ +I GL +AG I +A +F K G
Sbjct: 517 NGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGI 576
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
PD+ +YNA+I S + ++ C + T L+ L K+ + A
Sbjct: 577 PDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 633
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 174/354 (49%), Gaps = 5/354 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HP ++N ++K L + + + +G + D + +++ + G++
Sbjct: 128 HPTAI----TFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRIT 183
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
A+Q+L R++ ++ +A N+++ +C+ V A L++ M K + +V TYN +I
Sbjct: 184 AALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALI 243
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
SG+S + ++ + ++ E +P+ TF+ L++G + G+++DA V M +
Sbjct: 244 SGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIK 303
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN+++ Y S+ ++ + M+S N+ YT +++G K + V +A+ +
Sbjct: 304 PDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINL 363
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
FEEM R I+P+ T +S ++ LC G A+ + + G ++ Y +L L
Sbjct: 364 FEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCK 423
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L +++ G D Y +I GLC G+LE+A V E+ L KG+
Sbjct: 424 NHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGY 477
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 180/378 (47%), Gaps = 1/378 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D SY ++ L + +L + + V P+ ++++D+ +A V A +
Sbjct: 165 DQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLY 224
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++ + D + N ++ + A LFN MK + + NV T+NI++ G+ K
Sbjct: 225 SQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKE 284
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+V + + VL ++ + PD +T++ L++G +++ A ++FD+M G + Y
Sbjct: 285 GKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIY 344
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+++ + + DE + ++ M PN+ TY+ LI GL K ++ AL++ +EM D
Sbjct: 345 TTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHD 404
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
RG P+ T +S L+ LC A+ + + G + + Y +L++ L G+
Sbjct: 405 RGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLED 464
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+++ ++ GY D Y +I G C+ G + A+ ++ + G P+ Y +
Sbjct: 465 AQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVIL 524
Query: 521 KLLASNKLESAYNLFRKI 538
L ++ ++A L R++
Sbjct: 525 SLFEKDENDTAEKLLREM 542
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 176/405 (43%), Gaps = 47/405 (11%)
Query: 106 FLQKLKGKGVIEDA-LWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
L+++ GK V +A ++N+ +D + + L +A L+ K + DV
Sbjct: 188 LLKRVDGKLVQPNAVMYNMIID--------NMCKAKLVNDAFDLYSQMVAKR--ICPDVF 237
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ ++ ++ + M KE +NP++ T +I++D F + G+V A +L +
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIM 297
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+K D + N ++ C V A +F+SM G V+ NV Y +++G+ K+ V
Sbjct: 298 MKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMV 357
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
D+AI +F+ M+ + P+ Y+++
Sbjct: 358 -----------------------------------DEAINLFEEMRCRKIIPNVVTYSSL 382
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I +G +K M PN+ TY+ ++ L K+ V A+ + + D+GI
Sbjct: 383 IDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGI 442
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P T T ++ LC G A +++ G L + AY ++++ G L
Sbjct: 443 RPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALA 502
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L +M+++G + + YE VI L + + A ++ E + +G
Sbjct: 503 LLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 140/306 (45%), Gaps = 42/306 (13%)
Query: 141 LSGEAMVLFFNWAI------KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
+SG + V N+AI K N+ +V ++N++V + + VL+ M K+ +
Sbjct: 243 ISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDI 302
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
PD+ T + +MD + +V KA + + G+ + + ++ C+ V A +
Sbjct: 303 KPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAIN 362
Query: 255 LFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKE---------IVA--------- 295
LF M+ K++ NV+TY+ +I G KLG++ +++ E IV
Sbjct: 363 LFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALC 422
Query: 296 -----------------EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
+G PD T++ LI+GL ++GR++DA VF+ + KG D
Sbjct: 423 KNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVY 482
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
AY +I + G FD+ + M C PN TY +I L + + A ++ EM
Sbjct: 483 AYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREM 542
Query: 399 LDRGIV 404
+ RG++
Sbjct: 543 IVRGLL 548
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 131/304 (43%), Gaps = 40/304 (13%)
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
N +L L + H A SL M+ + + T+NI+I+ +S+LG + +I
Sbjct: 63 QFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKI 122
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+ +G+ P ++TF+ LI+GL G I A+ D + +G D +Y
Sbjct: 123 LKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT----------- 171
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
LI+GL K ++ AL++ + + + + P+
Sbjct: 172 ------------------------LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMI 207
Query: 414 LEPLCSYGPPHAAMMMYKK--ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
++ +C + A +Y + A+++ C T Y L+ S K +DL+++M++
Sbjct: 208 IDNMCKAKLVNDAFDLYSQMVAKRI-CPDVFT-YNALISGFSAVSKLNYAIDLFNKMKKE 265
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
+ + ++ G C G++ +A +V+ ++ P + Y+ L + + NK+ A
Sbjct: 266 NINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKA 325
Query: 532 YNLF 535
++F
Sbjct: 326 KDIF 329
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/141 (18%), Positives = 59/141 (41%)
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+L + P T L L A+ ++++ G + + +L+ S G
Sbjct: 52 LLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGL 111
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+ ++ ++ + GY + +I GLC G + A+ ++ + +GF ++ Y
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L N L ++ +A L +++
Sbjct: 172 LINGLCKVGRITAALQLLKRV 192
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 171/347 (49%), Gaps = 1/347 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y ++++A +R + +L +M +G PD+ T ++V++ + G+V AI+ L
Sbjct: 194 DVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFL 253
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
L +G + + S N+VL LC A L M K NV+T+N++IS +
Sbjct: 254 KNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRK 313
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G V VL++I G SP+SL+++ L+ + ++D A+ D M +GC PD +Y
Sbjct: 314 GLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSY 373
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +++ G+ D ++ + C P + +Y +I GL K+ K +ALE+ EM+
Sbjct: 374 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 433
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G+ P T ++ LC A+ + K + +G + + Y ++ L +
Sbjct: 434 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS 493
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
+DL+ M +G + Y +I GL G ++ A +++E +G
Sbjct: 494 AIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 167/348 (47%), Gaps = 4/348 (1%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
PD+ + +M + AGQV A + + ++ DA + + ++ LC R A
Sbjct: 123 ACGPDVMAYNAMMAGYCGAGQVDAARRWCA---ERAVERDAYTCDTLIRGLCGRGRTANA 179
Query: 253 SSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
++ + M + + + +V+TY I++ K + ++L E+ +G +PD +T++ ++ G
Sbjct: 180 LAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNG 239
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
+ + GR+DDAIE + GC P+T +YN V+ + +++ + M C PN
Sbjct: 240 ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPN 299
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+ T+ LIS L + V ALEV E++ G P++ + L C AM
Sbjct: 300 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLD 359
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
GC + +Y LL L G+ + ++L H++++ G Y VI GL G
Sbjct: 360 LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 419
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + A+ ++ E + KG P + YS ++ L +++E A F K++
Sbjct: 420 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ 467
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 164/347 (47%), Gaps = 1/347 (0%)
Query: 190 AKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHV 249
A+ V D T ++ G+ A+ +L + D + ++L C+R
Sbjct: 152 AERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGY 211
Query: 250 GAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
A L + M+ K +++TYN+V++G + G+V + LK + + G P++++++ +
Sbjct: 212 KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIV 271
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
++GL A R +DA E+ M +KGC P+ +N +IS G + ++ + + Y C
Sbjct: 272 LKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 331
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
PN +Y L+ K +K+ A+ + M+ RG P + + L LC G A+
Sbjct: 332 SPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 391
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ + + GC L +Y ++ L+ GK L+L +EM G D Y + AGLC
Sbjct: 392 LLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLC 451
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
++E+A+ + G P+ ++Y+ + L + SA +LF
Sbjct: 452 REDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLF 498
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 1/145 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K A + SYN ++ L + +L++M +G+ PD+ T S + R +
Sbjct: 396 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDR 455
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
+ AI+ G+++D G++ + N ++ LC+R +A LF M G + N TY I
Sbjct: 456 IEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 515
Query: 273 VISGWSKLGQVVEMERVLKEIVAEG 297
+I G + G + E +L E+ + G
Sbjct: 516 LIEGLAYEGLIKEARDLLDELCSRG 540
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 188/362 (51%), Gaps = 6/362 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR---AGQVY 215
+ +V ++NV++ AL + + +V+ DM G +P++ + + ++D + + G++Y
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
KA +L + + + + + N+++ + ++ + +F M + V+ NV+TYN +I
Sbjct: 279 KADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLI 338
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G G++ E + ++V+ G P+ +T+ LI G + G + +A+++FD++K +G
Sbjct: 339 NGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTR 398
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P T YN +I Y +G D+ + M P++ TY LI+GL ++ + A ++
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F+++ ++G+ P T +E CS G A M+ K+ K+G K Y ++++
Sbjct: 459 FDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCK 517
Query: 455 FGKCGMLLDLWHEMQ-ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
G ++ +M+ E + Y ++ G G+LE+A +++ E L KG P+R+
Sbjct: 518 EGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRI 577
Query: 514 VY 515
Y
Sbjct: 578 TY 579
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 162/343 (47%), Gaps = 13/343 (3%)
Query: 205 MDSFIRAG---QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+D F+R G QV+ + ++ + + V+ + R +G + + G
Sbjct: 124 LDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYG 183
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
L + M+ ++ K + ++E + KE++ P+ TF+ +I L + G+++ A
Sbjct: 184 YKL-SAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK---YYKGMSSYNCEPNMDTYTRL 378
+V + MK G P+ +YN +I Y +G + K K M PN+ T+ L
Sbjct: 243 RDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNIL 302
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I G K + +L+VF+EMLD+ ++P+ T S + LC+ G + A+ M K G
Sbjct: 303 IDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGV 362
Query: 439 KLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
+ +L Y L ++GF K GM+ LD++ ++ G +Y +I C +G++++
Sbjct: 363 QPNLITYHSL---INGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDD 419
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ EE R+G P Y+ L L + +E+A LF ++
Sbjct: 420 GFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 151/313 (48%), Gaps = 5/313 (1%)
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLG---QVVEMERVL 290
+ NVV+ LC+ + A + MK NV++YN +I G+ KLG ++ + + VL
Sbjct: 225 TFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVL 284
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
KE+V SP+ TF+ LI+G + + +++VF M ++ P+ YN++I+ +
Sbjct: 285 KEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNG 344
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
G +E + M S +PN+ TY LI+G K+ + +AL++F+ + +G P+T
Sbjct: 345 GKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMY 404
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
++ C G + ++ + G + Y L+ L G L+ ++
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTN 464
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G P D + ++ G C+ G+ A ++++E + G P L Y+ + L++
Sbjct: 465 KGLP-DLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKA 523
Query: 531 AYNLFRKIKIARQ 543
A N+ +++ R+
Sbjct: 524 ATNMRTQMEKERR 536
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 158/356 (44%), Gaps = 58/356 (16%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+ ++ ++N+++ + V +M + V P++ T + +++ G++ +AI
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAI 351
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
M ++ G++ + + + ++ C+ + A +F+S+KG+ YN++I +
Sbjct: 352 GMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAY 411
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
KLG++ + + +E+ EG PD T++ LI GL R G I+ A ++FD + KG PD
Sbjct: 412 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDL 470
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
++ ++ Y S G+ + K MS +P TY ++ G K + A + +
Sbjct: 471 VTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQ 530
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M +K R++ ++++ +Y +LL+ G+ +
Sbjct: 531 M--------------------------------EKERRL--RMNVASYNVLLQ---GYSQ 553
Query: 458 CGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
G L D L +EM E G + YE +V EE + KGF P
Sbjct: 554 KGKLEDANMLLNEMLEKGLVPNRITYE----------------IVKEEMVDKGFVP 593
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 87/164 (53%), Gaps = 3/164 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV +YN ++ L R + + + +G+ PDL T I+M+ + G+ KA
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAA 490
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG--KVLFNVMTYNIVISG 276
+L + GLK + N+++ C+ ++ AA+++ M+ ++ NV +YN+++ G
Sbjct: 491 MLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG 550
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
+S+ G++ + +L E++ +G P+ +T+ + E + G + D
Sbjct: 551 YSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFVPD 594
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 102/218 (46%), Gaps = 21/218 (9%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ +F ++K + YN+++ A + D + +M +EG+ PD+ T +
Sbjct: 384 EALDMF--DSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
++ R G + A ++ +L + GL D + ++++ C R A+ L M K
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTNKGLP-DLVTFHILMEGYCSRGESRKAAMLLKEMSKMG 500
Query: 263 VLFNVMTYNIVISGWSKLGQV---------VEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
+ +TYNI++ G+ K G + +E ER L+ VA +++ L++G
Sbjct: 501 LKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVA--------SYNVLLQGYS 552
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
+ G+++DA + + M EKG P+ Y V + G
Sbjct: 553 QKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKG 590
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 175/399 (43%), Gaps = 7/399 (1%)
Query: 143 GEAMVLFFNWAIK--HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
GEA+ LF + PNV +Y ++ L + +L M + PD+
Sbjct: 152 GEALHLFDKMIDEGFQPNVV----TYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVI 207
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM- 259
+ ++DS + QV +A + ++ G+ D + ++ LC ++L N M
Sbjct: 208 YTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMV 267
Query: 260 KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
K+L +V+ ++ V+ K G+V E ++ ++ G PD +T++ L++G +D
Sbjct: 268 NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMD 327
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
+A++VFD M KG PD +Y +I+ Y + D+ M ++ M P+ TY L+
Sbjct: 328 EAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLM 387
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
GL ++ DA+ +F EM+ RG +P T + L+ LC AM + K
Sbjct: 388 YGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLN 447
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+ Y +++ + G+ DL+ + G Y +I GLC G L A +
Sbjct: 448 PDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 507
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
E P Y+ ++ L +N+ A L ++
Sbjct: 508 FMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEM 546
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 186/390 (47%), Gaps = 1/390 (0%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H + + + ++ ++ + K + + ++ + M GV P++ TL+I+++SF +V
Sbjct: 58 HMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVG 117
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVI 274
A +L ++ G + D + ++ LC +G A LF+ M + NV+TY +I
Sbjct: 118 FAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLI 177
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G K+G R+L+ + PD + ++ +I+ L + ++ +A +F M +G
Sbjct: 178 NGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGIS 237
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD Y +++ ++ ++ M + P++ ++ ++ L K KV +A E+
Sbjct: 238 PDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEI 297
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ M+ RG+ P T T+ ++ C A+ ++ + G + +Y L+
Sbjct: 298 VDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCK 357
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
K + L+ EM + D + Y ++ GLC++G+L++A+ + E + +G P +
Sbjct: 358 IHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVT 417
Query: 515 YSKLSNKLLASNKLESAYNLFRKIKIARQN 544
YS L + L + LE A L + I+ + N
Sbjct: 418 YSILLDSLCKNRHLEEAMALLKAIEASNLN 447
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 163/357 (45%), Gaps = 1/357 (0%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+++ N DV Y I+ +L + + N+ S M +G++PD+ T + ++ +
Sbjct: 195 SMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLC 254
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYN 271
+ +L ++ + + D + V+ LC+ V A + + M + V +V+TY
Sbjct: 255 EWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYT 314
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
++ G ++ E +V +V +GF+PD ++++ LI G + +ID A+ +F+ M K
Sbjct: 315 TLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRK 374
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
PDT YN ++ VG + + + M + P++ TY+ L+ L K+R + +A
Sbjct: 375 EWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEA 434
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+ + + + + P ++ +C G AA ++ G S+ Y +++
Sbjct: 435 MALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHG 494
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L G L+ EM + DG Y + G + A+ ++EE L +GF
Sbjct: 495 LCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGF 551
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 152/319 (47%), Gaps = 1/319 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D+ +Y +V AL + + +L+ M + PD+ S V+D+ + G+V +A
Sbjct: 236 ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAH 295
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+++ + G++ D + ++ C + + A +F+ M K +V++Y +I+G+
Sbjct: 296 EIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGY 355
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K+ ++ + + +E+ + + PD+ T++ L+ GL GR+ DAI +F M +G PD
Sbjct: 356 CKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDL 415
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y+ ++ + +E M K + + N P++ Y +I G+ ++ ++ A ++F
Sbjct: 416 VTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSN 475
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ +G+ PS T + LC G + A ++ + C Y + R +
Sbjct: 476 LSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNE 535
Query: 458 CGMLLDLWHEMQESGYPSD 476
+ L EM G+ +D
Sbjct: 536 TLRAIQLLEEMLARGFSAD 554
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 1/177 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D K+YN ++ L + +M G PDL T SI++DS + + +A+ +L
Sbjct: 379 DTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALL 438
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
+E L D + N+++ +C+ + AA LF+++ K L +V TYNI+I G K
Sbjct: 439 KAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKR 498
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
G + E ++ E+ SPD T++ + G + AI++ + M +G D+
Sbjct: 499 GLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADS 555
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+++ N S + D+ + + + + P++ + +L++ + K + + L +
Sbjct: 30 SSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLST 89
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+M G+ P+ T+ + C A + K K+G + T + L+R L G
Sbjct: 90 QMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEG 149
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRLVY 515
K G L L+ +M + G+ + Y +I GLC +G A+ ++ S+ +G C P ++Y
Sbjct: 150 KIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLL-RSMEQGNCQPDVVIY 208
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
+ + + L ++ A+NLF ++
Sbjct: 209 TSIIDSLCKDRQVTEAFNLFSQM 231
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/150 (19%), Positives = 59/150 (39%)
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
DAL F +L PS L + + + + G ++ +L+
Sbjct: 48 DALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILI 107
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
+ G + ++ + G+ D + +I GLC G++ A+ + ++ + +GF
Sbjct: 108 NSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQ 167
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P+ + Y L N L +A L R ++
Sbjct: 168 PNVVTYGTLINGLCKVGNTSAAIRLLRSME 197
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 164/321 (51%), Gaps = 1/321 (0%)
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVIS 275
A+++ + G+ ++ S N+VL CLCQ V A +L M + F +V++Y +V+S
Sbjct: 226 AVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVS 285
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G+ ++G++ ++ +++ E+ +G PD ++ +I L + G + +A ++ M++ G P
Sbjct: 286 GYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFP 345
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D Y VIS + +G+ K + M P++ TYT +I G+ KS K+ +A E+F
Sbjct: 346 DNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMF 405
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
EML +G+ P T T+ ++ C G A ++ + + G ++ Y L L
Sbjct: 406 NEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKN 465
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
G+ + +L HEM G + Y ++ GLC IG +E V +MEE GF P + Y
Sbjct: 466 GEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITY 525
Query: 516 SKLSNKLLASNKLESAYNLFR 536
+ L + ++ A+ L R
Sbjct: 526 TTLMDAYCKMGEMAKAHELLR 546
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 163/356 (45%), Gaps = 1/356 (0%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
N+L M G PD+ + +V+ + R G++ K ++++ L+ GLK D N ++ L
Sbjct: 263 NLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLL 322
Query: 244 CQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C+ V A L M K V + + Y VISG+ KLG V ++ E+ + PD
Sbjct: 323 CKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDI 382
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+T++ +I G+ ++G++ +A E+F+ M KG PD Y A+I Y G+ E +
Sbjct: 383 VTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQ 442
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M PN+ TYT L GL K+ ++ A E+ EM +G+ P+ T + + LC G
Sbjct: 443 MVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGN 502
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
+ + ++ G Y L+ G+ +L M +
Sbjct: 503 IEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNV 562
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++ G C G LE+ ++E L KG P+ ++ L + N + + +++ +
Sbjct: 563 LMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAM 618
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 174/400 (43%), Gaps = 42/400 (10%)
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNV 238
D + ++ ++ +G+ PD + ++ + G+V +A Q+L + +G+ D
Sbjct: 293 LDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTT 352
Query: 239 VLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
V+ C+ +V AA LF+ M + K++ +++TY VI G K G++VE + E++ +G
Sbjct: 353 VISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKG 412
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
PD +T++ LI+G +AG + +A V + M +KG P+ Y A+ G+ D
Sbjct: 413 LEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVAN 472
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+ MS +PN+ TY +++GL K + +++ EEM G P T T T+ ++
Sbjct: 473 ELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAY 532
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD-------------- 463
C G A + + + +L + +L ++GF GML D
Sbjct: 533 CKMGEMAKAHELLRIMLNKRLQPTLVTFNVL---MNGFCMSGMLEDGERLIEWMLEKGIM 589
Query: 464 ------------------------LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
++ M + G D Y +I G C ++ A +
Sbjct: 590 PNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFL 649
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+E + KG+ + Y L K A LF +++
Sbjct: 650 HKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMR 689
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 182/414 (43%), Gaps = 16/414 (3%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
+ +LKGKG+ D N+ L L G+VV L + W + NV
Sbjct: 299 LVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQL----LRGMRKWGVFPDNVV----- 349
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y ++ + C + +M ++ + PD+ T + V+ ++G++ +A +M +
Sbjct: 350 YTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEML 409
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVV 284
GL+ D + ++ C+ + A S+ N M K L NV+TY + G K G++
Sbjct: 410 VKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEID 469
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+L E+ +G P+ T++ ++ GL + G I+ +++ + M G PDT Y ++
Sbjct: 470 VANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLM 529
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
Y +G+ + + + M + +P + T+ L++G S + D + E ML++GI+
Sbjct: 530 DAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIM 589
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P+ T S ++ C A +YK G Y +L++ G K + +
Sbjct: 590 PNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIK---GHCKARNMKEA 646
Query: 465 W---HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
W EM E GY Y+ +I G + A + EE + G + +Y
Sbjct: 647 WFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIY 700
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 163/351 (46%), Gaps = 1/351 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V + + GV + + +IV+ + G+V +A +L ++ D G D S VV+ C
Sbjct: 229 VFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYC 288
Query: 245 QRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ + L + +KGK L + YN +I K G+VVE E++L+ + G PD++
Sbjct: 289 RIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNV 348
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
++ +I G + G + A ++FD M+ K PD Y +VI G E + + M
Sbjct: 349 VYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEM 408
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
EP+ TYT LI G K+ ++ +A V +M+ +G+ P+ T T+ + LC G
Sbjct: 409 LVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEI 468
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A + + + G + ++ Y ++ L G + L EM +G+ D Y +
Sbjct: 469 DVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTL 528
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
+ C +G++ A ++ L K P+ + ++ L N S LE L
Sbjct: 529 MDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERL 579
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 103/223 (46%), Gaps = 37/223 (16%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V +YN IV L + + ++ +M G PD T + +MD++ + G++ KA ++L
Sbjct: 486 NVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELL 545
Query: 222 -------------------------GRLED----------FGLKFDAESLNVVLWCLCQR 246
G LED G+ +A + N ++ C +
Sbjct: 546 RIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIK 605
Query: 247 LHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
++ A + ++ +M + V+ + TYNI+I G K + E + KE+V +G+S + T+
Sbjct: 606 NNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATY 665
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS-NY 347
LI G + + +A ++F+ M++ G + + Y+ + NY
Sbjct: 666 DALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNY 708
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 192/417 (46%), Gaps = 36/417 (8%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V +V + N+++ AL + + + + LSDM ++GV PD+ T + +++++ R G + +A
Sbjct: 354 VQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAF 413
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+++ + GLK + N ++ LC+ A + + M K + + TYNI++
Sbjct: 414 ELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVEC 473
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ +++ ER+ E+ ++G PD ++FS LI L + G +D A++ F MK G PD
Sbjct: 474 CRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDN 533
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +I + G E +K M C ++ TY +++GL K + +++A E+F E
Sbjct: 534 VIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTE 593
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL-------- 449
M +RG+ P T T+ + G + A+ +++ + K + Y L+
Sbjct: 594 MTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 653
Query: 450 -------------RR-----------LSGFGKCGMLLD---LWHEMQESGYPSDGEIYEY 482
RR ++G+ G + + LW EM E G+ +
Sbjct: 654 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 713
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ G C G A + L KG P + Y+ L N + ++ A+ L K++
Sbjct: 714 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKME 770
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 168/375 (44%), Gaps = 1/375 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D +YN+++ R + +M +GV PDL + S ++ + G + +A+
Sbjct: 459 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 518
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+ +++ GL D +++ C+ + A + + M + +V+TYN +++G
Sbjct: 519 KYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGL 578
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K + E + + E+ G PD TF+ LI G + G ++ A+ +F+ M ++ PD
Sbjct: 579 CKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDV 638
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I + + ++ + + M S PN +Y LI+G V++A +++E
Sbjct: 639 VTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDE 698
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+++G + T + ++ C G A G Y L+
Sbjct: 699 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 758
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L ++M+ SG D Y ++ G G+++ A L+M + + +G P R Y+
Sbjct: 759 MDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTS 818
Query: 518 LSNKLLASNKLESAY 532
L N + N L+ A+
Sbjct: 819 LINGHVTQNNLKEAF 833
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 153/353 (43%), Gaps = 1/353 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D+ S++ ++ L + D DM G+ PD +I++ F R G + +A+
Sbjct: 494 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 553
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
++ + + G D + N +L LC+ + A LF M + +F + T+ +I+G+
Sbjct: 554 KVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGY 613
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G + + + + ++ PD +T++ LI+G + ++ E+++ M + P+
Sbjct: 614 XKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNH 673
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+Y +I+ Y ++G E + + M E + T ++ G ++ A E
Sbjct: 674 ISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSN 733
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
ML +GIVP T + + A + K G + Y ++L S G+
Sbjct: 734 MLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGR 793
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
+ +M E G D Y +I G L+ A V +E L++GF P
Sbjct: 794 MQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 846
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 185/404 (45%), Gaps = 14/404 (3%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
E++VL + +P V ++++V+ + + C + +G+ + +
Sbjct: 275 ESLVLTYGNCGSNPLV------FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNS 328
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++ ++ G V A ++ + G++ + +LN+++ LC+ + S + M+ K
Sbjct: 329 LLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKG 388
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+F +V+TYN +I+ + + G + E ++ + +G P T++ +I GL + G+ A
Sbjct: 389 VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAK 448
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
V D M + G PDT YN ++ + + + + M S P++ +++ LI L
Sbjct: 449 GVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 508
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K+ + AL+ F +M + G+ P T + C G A+ + + + GC L +
Sbjct: 509 SKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDV 568
Query: 443 TAYKLLLRRLSGFGKCGMLL---DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
Y + L+G K ML +L+ EM E G D + +I G G + AV +
Sbjct: 569 VTYNTI---LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTL 625
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
E +++ P + Y+ L + +++E L+ + I+R+
Sbjct: 626 FEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM-ISRR 668
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 162/384 (42%), Gaps = 21/384 (5%)
Query: 157 PNVAKDVKSYNVIVKALGR-RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PN ++S++ ++ L R R+ D +L + K GV+ R V
Sbjct: 230 PNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVS--------------RVEIVE 275
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVI 274
+ G L FD L V + ++L G + F +K K L ++ N ++
Sbjct: 276 SLVLTYGNCGSNPLVFD---LLVRTYVQARKLREGCEA--FRVLKSKGLCVSINACNSLL 330
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G K+G V + +E+V G + T + +I L + +I++ M+EKG
Sbjct: 331 GGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVF 390
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN +I+ Y G +E + MS +P + TY +I+GL K+ K A V
Sbjct: 391 PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 450
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+EML G+ P T T L C A ++ + G L ++ L+ LS
Sbjct: 451 LDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSK 510
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G L + +M+ +G D IY +I G C G + A+ V +E L +G +
Sbjct: 511 NGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVT 570
Query: 515 YSKLSNKLLASNKLESAYNLFRKI 538
Y+ + N L L A LF ++
Sbjct: 571 YNTILNGLCKEKMLSEADELFTEM 594
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 82/150 (54%), Gaps = 1/150 (0%)
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
+M ++G + T + ++ + RAG KA + L + G+ D + N ++ +
Sbjct: 698 EMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 757
Query: 248 HVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
++ A +L N M+ +L +V+TYN++++G+S+ G++ E E ++ +++ G +PD T++
Sbjct: 758 NMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYT 817
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
LI G + +A V D M ++G PD
Sbjct: 818 SLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 163/331 (49%), Gaps = 4/331 (1%)
Query: 165 SYNVIVKAL-GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+YN ++ +L GR + D + + +PD+ + ++V+ R GQV KA++++ R
Sbjct: 220 AYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVER 279
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLG 281
+ +FG D + N+++ LC+ V + ++ G + NV+T+ VISG+ K G
Sbjct: 280 MNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 339
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ + V ++VA G P+++T++ LI G G+ G + A+EV+ M C PD ++
Sbjct: 340 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 399
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM-LD 400
++I Y G D+ ++ + M+ + +PN+ T++ +I L K + +A+ + E+ L
Sbjct: 400 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLR 459
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
I P ++ LC G A ++ K + GC+ Y +L+ +
Sbjct: 460 PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISE 519
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ +HEM E+G D I+ L G
Sbjct: 520 AIMFFHEMVEAGCSPDSITVNCFISCLLKAG 550
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 179/371 (48%), Gaps = 24/371 (6%)
Query: 178 FFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE-DFGLKFDAESL 236
F C+ LS + P + ++ R+G+ A+Q+ ++ +G DA L
Sbjct: 133 FTALHCSPLS------ITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFL 186
Query: 237 N-VVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVIS---GWSKLGQVVEM-ERVLK 291
+ +V C C L +A+ L + + YN ++S G ++ VV + ER ++
Sbjct: 187 SFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQ 246
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
+ V +SPD +F+ +I+G+ R G++ A+E+ + M E GC PDT +N ++
Sbjct: 247 DRV---YSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTN 303
Query: 352 DFDECMKYYKGMSSYN-CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
+ + + + C PN+ T+T +ISG K+ K+ DA+ V+ +M+ GI+P+T T
Sbjct: 304 EVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTY 363
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHE 467
+ G +A+ +Y++ ++ C + + L + G+ +CG L D +W +
Sbjct: 364 NVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSL---IDGYCRCGQLDDALRIWSD 420
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE-SLRKGFCPSRLVYSKLSNKLLASN 526
M + + + +I LC + + A+ ++ E +LR P +Y+ + + L
Sbjct: 421 MAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCG 480
Query: 527 KLESAYNLFRK 537
K++ A NL RK
Sbjct: 481 KVDEA-NLIRK 490
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 151/332 (45%), Gaps = 40/332 (12%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
++ ++ RG + + + LF W I+ + DV S+NV++K + R ++ M
Sbjct: 224 LMSSLIGRGRVH-DVVALFERW-IQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMN 281
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF-DAESLNVVLWCLCQRLHV 249
+ G +PD T +I++D R +V + ++L RL+ G+ + + V+ C+ +
Sbjct: 282 EFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKL 341
Query: 250 GAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
A +++N M ++ N +TYN++I+G+ K+G + V +++ PD +TFS L
Sbjct: 342 EDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSL 401
Query: 309 IEGLGRAGRIDDAIEVFDTMK-------------------------EKGC---------- 333
I+G R G++DDA+ ++ M E C
Sbjct: 402 IDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPD 461
Query: 334 -GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P YN VI G DE KGM C P+ TYT LI G ++++A+
Sbjct: 462 IAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAI 521
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
F EM++ G P + T+ F+ L G P+
Sbjct: 522 MFFHEMVEAGCSPDSITVNCFISCLLKAGMPN 553
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 178/407 (43%), Gaps = 38/407 (9%)
Query: 135 VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
V+ R +A+ LF + H + D + + +V + D +LS ++ G
Sbjct: 156 VLCRSGRQADALQLF-DQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGC 214
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGR-LEDFGLKFDAESLNVVLWCLCQRLHVGAAS 253
+ + +M S I G+V+ + + R ++D D S NVV+ +C+ V A
Sbjct: 215 RVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKAL 274
Query: 254 SLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS-PDSLTFSFLIEG 311
L M + +T+NI++ G + +V VL+ + +G P+ +TF+ +I G
Sbjct: 275 ELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISG 334
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
+AG+++DA+ V++ M G P+T YN +I+ Y VGD ++ Y+ M+ C P+
Sbjct: 335 YCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPD 394
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+ T++ LI G + ++ DAL ++ +M I P+ T + + LC A+ +
Sbjct: 395 VVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLN 454
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ L+L ++ + IY VI LC G
Sbjct: 455 E-----------------------------LNLRPDIAPQAF-----IYNPVIDVLCKCG 480
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+++ A L+ + KG P + Y+ L +++ A F ++
Sbjct: 481 KVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEM 527
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 86/172 (50%), Gaps = 2/172 (1%)
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP-PHAAMM 428
P+ + ++I L +S + ADAL++F++M SFL C+ A+
Sbjct: 145 PSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASAT 204
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE-MQESGYPSDGEIYEYVIAGL 487
+ KA + GC++ AY L+ L G G+ ++ L+ +Q+ Y D + VI G+
Sbjct: 205 LLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGV 264
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
C +GQ++ A+ ++E G P + ++ + + L +N++ + + R+++
Sbjct: 265 CRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQ 316
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 179/387 (46%), Gaps = 3/387 (0%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F+ A++H +V +YN+++K LG + CN+ M +G+ P L + + ++
Sbjct: 417 LFDEAVEHG--ITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGH 474
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNV 267
+ G + KA ML + + GLK +A + +++ ++ A +F M +
Sbjct: 475 CKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTD 534
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
T+N VI+G K G+V E + L + +GF S+T++ +I+G + G +D A+ +
Sbjct: 535 HTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYRE 594
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M E G PD Y ++I ++ + M + ++ Y+ LI G K
Sbjct: 595 MCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHD 654
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ A + F E+LD G+ P+T S + AA+ ++++ K L Y
Sbjct: 655 MESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTS 714
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
++ L GK + LDL+ EM D +Y +I GL N GQLENA +++E
Sbjct: 715 IIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNN 774
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNL 534
PS LVY+ L L+ A+ L
Sbjct: 775 ITPSVLVYNILIAGNFREGNLQEAFRL 801
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 180/354 (50%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ ++ + GV PD+ S++++ + G + KA ++ R++ G++ + +N +L
Sbjct: 347 LFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFH 406
Query: 245 QRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
++ + A LF+ + NV+TYNI++ +LG+V E + +++V++G +P ++
Sbjct: 407 EQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVS 466
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
++ LI G + G +D A + ++ E+G P+ Y +I + GD + ++ M
Sbjct: 467 YNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMM 526
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
+ N P T+ +I+GL K+ +V++ + + +G V ++ T S ++ G
Sbjct: 527 AANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVD 586
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
+A++ Y++ + G + Y L+ L K G+ L++ +M+ G D Y +I
Sbjct: 587 SALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALI 646
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G C + +E+A E L G P+ +VY+ + + + N +E+A NL +++
Sbjct: 647 DGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEM 700
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 163/381 (42%), Gaps = 39/381 (10%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V N ++ A+ RR + +M + G+ D TL +VM + ++ G+ + +
Sbjct: 185 VPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFK 244
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKL 280
+ GL+ DA + ++++ +C+RL + A L M+ G V + TY VI K
Sbjct: 245 EAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVP-SKGTYTAVIVACVKQ 303
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G VE R+ E+V+ G + + L++G G ++ A+++FD + E G PD +
Sbjct: 304 GNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIF 363
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +I+ VGD ++ + Y M +PN+ L+ G + + A +F+E ++
Sbjct: 364 SVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVE 423
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
GI ++ Y +LL+ L GK
Sbjct: 424 HGIT------------------------------------NVVTYNILLKWLGELGKVNE 447
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+LW +M G Y +I G C G ++ A +++ L +G P+ + Y+ L +
Sbjct: 448 ACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLID 507
Query: 521 KLLASNKLESAYNLFRKIKIA 541
E A+ +F ++ A
Sbjct: 508 GFFKKGDSERAFVVFEQMMAA 528
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 116/267 (43%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
+N ++ + ++ ++ + + ++ P + L+ + R + DA +++D M
Sbjct: 152 VFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEM 211
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
E+G D + V+ + G F+E K++K E + Y+ L+ + + +
Sbjct: 212 VERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDL 271
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A E+ +EM + G VPS GT T+ + G A+ + + VG +++ + L
Sbjct: 272 NLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSL 331
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
++ G + L L+ E+ E G D I+ +I G +G +E A + G
Sbjct: 332 MKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGI 391
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLF 535
P+ + + L N LE AY LF
Sbjct: 392 QPNVFIVNSLLEGFHEQNLLEHAYGLF 418
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 167/333 (50%), Gaps = 3/333 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N +V SY++I+ L + ++ + ++M +GV P++ T S+++D + GQV KA
Sbjct: 232 NCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKA 291
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
++L + G+ + + ++ C + +A LF SM K +V++YN++I+G
Sbjct: 292 KKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLING 351
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K +V E ++ E++ G PD T L++ L AG++DDA E+F +K D
Sbjct: 352 YCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKD 411
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+ G E MK + + SYN + +++T+ LI GL K+ K+ A E+FE
Sbjct: 412 LCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFE 471
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
++ + GI P +S + C G A ++++K + GC L Y +L+R
Sbjct: 472 KLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESN 531
Query: 457 KCGMLLDLWHEMQESG-YPSDGEIYEYVIAGLC 488
K ++ L H M E +P DG IY V +C
Sbjct: 532 KLEKVVQLLHRMIEKDVWPDDG-IYAIVEDMVC 563
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 181/385 (47%), Gaps = 7/385 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ + N+++ L + ++ + + G PD+ T + ++ ++ +A ++
Sbjct: 125 DLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLF 184
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM---KGKVLFN----VMTYNIVI 274
R++ G + + ++ LC ++ A M +FN V++Y+I+I
Sbjct: 185 MRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIII 244
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G K+G E + E+V +G P+ +TFS LI+ L + G++ A ++ + M + G
Sbjct: 245 DGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIV 304
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ Y ++I + VGD + + + M S EP++ +Y LI+G K+ KV +A+++
Sbjct: 305 PNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKL 364
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F EML G+ P T L+ L G A +++ + L + L L
Sbjct: 365 FNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCK 424
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G + L++E++ D E + +I GLC G+LE A + E+ +G P +
Sbjct: 425 NGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMA 484
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
YS + + +++ A LF+K++
Sbjct: 485 YSSMIHGFCKKGQVDKANILFQKME 509
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 187/455 (41%), Gaps = 77/455 (16%)
Query: 161 KDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
+ + S+N ++ L + + + + ++ M G+ PDL TL+I+++ ++ + +
Sbjct: 89 RSIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAA 148
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM----------------KGKVL 264
+ + G D + ++ LC + A+ LF M KG
Sbjct: 149 MAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCA 208
Query: 265 F--------------------------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
NV++Y+I+I G K+G E + E+V +G
Sbjct: 209 LGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGV 268
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
P+ +TFS LI+ L + G++ A ++ + M + G P+ Y ++I + VGD + +
Sbjct: 269 QPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKE 328
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT--------- 409
+ M S EP++ +Y LI+G K+ KV +A+++F EML G+ P T
Sbjct: 329 LFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALF 388
Query: 410 --------------------------ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
FL+ LC G AM ++ + KL +
Sbjct: 389 LAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIE 448
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
+ L+ L GK +L+ ++ E G D Y +I G C GQ++ A ++ ++
Sbjct: 449 TFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKM 508
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P + YS L SNKLE L ++
Sbjct: 509 EENGCSPDLITYSILMRGFYESNKLEKVVQLLHRM 543
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 134/339 (39%), Gaps = 45/339 (13%)
Query: 242 CLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
C + V A F+ M + ++ ++N +++G +K+ ++ + K++ G PD
Sbjct: 70 CKTGSISVTQAHQFFDLM----MRSIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPD 125
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
LT + LI L RI++ + + +G PD + +I E K +
Sbjct: 126 LLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFM 185
Query: 362 GMSSYNCEPNMDTYTRLISGL--LKSRKVA------------------------------ 389
M C PN+ TY LI GL L + +A
Sbjct: 186 RMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIID 245
Query: 390 ---------DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
+A+ +F EM+D+G+ P+ T + ++ LC G A + + ++G
Sbjct: 246 GLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVP 305
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+L Y L++ G +L+ M GY D Y +I G C ++E A+ +
Sbjct: 306 NLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLF 365
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
E L G P L L + K++ A LFR IK
Sbjct: 366 NEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIK 404
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/191 (19%), Positives = 78/191 (40%), Gaps = 34/191 (17%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
IK + KD+ + + L + + + +++ + D+ET ++D +AG
Sbjct: 402 VIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAG 461
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNI 272
++ A ++ +L + G++ DA + + ++ C++ V A+ LF M+
Sbjct: 462 KLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKME------------ 509
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
G SPD +T+S L+ G + +++ +++ M EK
Sbjct: 510 ----------------------ENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKD 547
Query: 333 CGPDTNAYNAV 343
PD Y V
Sbjct: 548 VWPDDGIYAIV 558
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 173/365 (47%), Gaps = 7/365 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
I V +V + N++V AL + + + LS++ ++GV PD+ T + ++ ++ G
Sbjct: 216 ISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGL 275
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
+ +A +++ + G + N V+ LC+ A +F M + + + TY
Sbjct: 276 MEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 335
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
++ K G VE E + ++ + PD + FS ++ R+G +D A+ F+++KE G
Sbjct: 336 LLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 395
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD Y +I Y G E M M C ++ TY ++ GL K + + +A
Sbjct: 396 LIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 455
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
++F EM +RG+ P + T+T ++ C G AM ++KK ++ KL + Y L L
Sbjct: 456 KLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTL---L 512
Query: 453 SGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
GFGK G + ++W +M + ++ LC+ G L A V +E + K
Sbjct: 513 DGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIK 572
Query: 510 PSRLV 514
P+ ++
Sbjct: 573 PTVMI 577
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 162/352 (46%), Gaps = 3/352 (0%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
N+ SDM V PDL S +M F R+G + KA+ +++ GL D +++
Sbjct: 351 NIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 410
Query: 244 CQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C++ + A +L N M + +V+TYN ++ G K + E +++ E+ G PDS
Sbjct: 411 CRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDS 470
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
T + LI+G + G + +A+E+F MKEK D YN ++ + VGD D + +
Sbjct: 471 YTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWAD 530
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M S P +++ L++ L +++A V++EM+ + I P+ S ++ C G
Sbjct: 531 MVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGN 590
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE--SGYPSDGEIY 480
+ +K G +Y L+ L +M+E G D Y
Sbjct: 591 ASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTY 650
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
++ G C Q++ A V+ + + +G P R Y+ L N ++ + L A+
Sbjct: 651 NSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAF 702
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 148/307 (48%), Gaps = 1/307 (0%)
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
+G ++ + ++ S +R G V A ++ + G+ + +LN+++ LC+ +
Sbjct: 184 KGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEK 243
Query: 252 ASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
+ + ++ K ++ +++TYN +IS +S G + E ++ + ++GFSP T++ +I
Sbjct: 244 VGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVIN 303
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
GL + G+ + A EVF M G PD+ Y +++ GD E + M S + P
Sbjct: 304 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVP 363
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
++ ++ ++S +S + AL F + + G++P T ++ C G AM +
Sbjct: 364 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLR 423
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
+ + GC + + Y +L L G L++EM E G D +I G C +
Sbjct: 424 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKL 483
Query: 491 GQLENAV 497
G L+NA+
Sbjct: 484 GNLQNAM 490
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 158/347 (45%), Gaps = 13/347 (3%)
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KG 261
+++ +F++A ++ +A + L G ++ N ++ L + V A ++ + +
Sbjct: 160 LLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRS 219
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
V NV T NI+++ K G++ ++ L E+ +G PD +T++ LI G +++A
Sbjct: 220 GVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEA 279
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
E+ M KG P YN VI+ G ++ + + M P+ TY L
Sbjct: 280 FELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL--- 336
Query: 382 LLKSRKVADALE---VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
L+++ K DA+E +F +M R +VP +S + G A+M + ++ G
Sbjct: 337 LMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 396
Query: 439 KLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
Y +L++ G+ + GM+ ++L +EM + G D Y ++ GLC L
Sbjct: 397 IPDNVIYTILIQ---GYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 453
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
A + E +G P + L + L++A LF+K+K R
Sbjct: 454 ADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKR 500
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 149/339 (43%), Gaps = 47/339 (13%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
++ +K G+I D NV ++ + G R + EAM L + A DV
Sbjct: 386 MYFNSVKEAGLIPD-----NVIYTILIQGYC--RKGMISEAMNL--RNEMLQQGCAMDVV 436
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ L +RK + ++M + G+ PD TL+I++D + G + A+++ ++
Sbjct: 437 TYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKM 496
Query: 225 EDFGLKFDAESLNVVL---------------WC--------------------LCQRLHV 249
++ +K D + N +L W LC + H+
Sbjct: 497 KEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHL 556
Query: 250 GAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
A +++ M K + VM N +I G+ + G + E L+++++EGF PD ++++ L
Sbjct: 557 SEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTL 616
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCG--PDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
I G + + A + M+EK G PD YN+++ + E + M
Sbjct: 617 IYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIER 676
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
P+ TYT LI+G + + +A +EML RG P
Sbjct: 677 GVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSP 715
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 3/175 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S++++V AL + V +M + + P + + ++ + R+G L ++
Sbjct: 542 SFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKM 601
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM---KGKVLFNVMTYNIVISGWSKLG 281
G D S N +++ + ++ A L M +G ++ +V TYN ++ G+ +
Sbjct: 602 ISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCREN 661
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
Q+ E E VL++++ G +PD T++ LI G + +A D M ++G PD
Sbjct: 662 QMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 97/243 (39%), Gaps = 1/243 (0%)
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
S DS+ F LI +A ++ +A E F ++ KG +A NA+I + + +G + +
Sbjct: 153 SNDSV-FDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWR 211
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
Y+ +S N+ T +++ L K K+ E+ ++G+ P T + +
Sbjct: 212 IYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYS 271
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
S G A + G + Y ++ L GK +++ EM SG D
Sbjct: 272 SQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 331
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y ++ C G + + + P + +S + + S L+ A F +
Sbjct: 332 TYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 391
Query: 539 KIA 541
K A
Sbjct: 392 KEA 394
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 115/308 (37%), Gaps = 35/308 (11%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N ++++I + + ++ E + ++G++ + LI L R G ++ A ++
Sbjct: 154 NDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIY 213
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS----- 380
+ G G + N +++ G ++ + + P++ TY LIS
Sbjct: 214 QEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQ 273
Query: 381 ------------------------------GLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
GL K K A EVF EML G+ P + T
Sbjct: 274 GLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 333
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
S L C G ++ R L + ++ + G L ++ ++E
Sbjct: 334 RSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 393
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
+G D IY +I G C G + A+ + E L++G + Y+ + + L L
Sbjct: 394 AGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 453
Query: 531 AYNLFRKI 538
A LF ++
Sbjct: 454 ADKLFNEM 461
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 183/382 (47%), Gaps = 3/382 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D +Y+ +V AL + + D L M +GV P+ T + ++ + GQ +A+
Sbjct: 250 IPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAV 309
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
++ + + D +L++++ LC+ + A +F++M KG+ NV +Y I+++G
Sbjct: 310 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP-NVFSYTIMLNG 368
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
++ G +V+M + ++ +G +PD TF+ LI+ G +D A+ +F+ M++ G PD
Sbjct: 369 YATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPD 428
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y VI+ +G D+ M+ + M P+ Y LI G + A E+
Sbjct: 429 VVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELIS 488
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
E+++ G+ +S + LC G A ++ VG + Y +L+ G
Sbjct: 489 EIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVG 548
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K L ++ M +G + +Y ++ G C IG+++ + + E L+KG PS ++Y+
Sbjct: 549 KMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYN 608
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
+ + L + + A F ++
Sbjct: 609 IIIDGLFEAGRTVPAKVKFHEM 630
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 186/398 (46%), Gaps = 1/398 (0%)
Query: 142 SGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
SG+A L A + DV +Y+ ++ + + C++ +M + G+ PD T
Sbjct: 198 SGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTY 257
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-K 260
S V+ + +A + KA L ++ + G+ + + N +++ A +F M +
Sbjct: 258 SSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 317
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
+L +V+T ++++ K G++ E V + +G +P+ +++ ++ G G + D
Sbjct: 318 HSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVD 377
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
++FD M G PD +N +I Y + G D+ M + M + +P++ TY +I+
Sbjct: 378 MTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIA 437
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
L + K+ DA+E F +M+D+G+ P ++ C++G A + + G L
Sbjct: 438 ALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHL 497
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+ + ++ L G+ +++ G +Y ++ G C +G++E A+ V
Sbjct: 498 DIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVF 557
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ + G P+ +VY L N +++ +LFR++
Sbjct: 558 DAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREM 595
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 195/418 (46%), Gaps = 5/418 (1%)
Query: 125 VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCN 184
V LS+ ++G + G + EA +F A+K N +V SY +++ + M +
Sbjct: 325 VTLSM-LMGSLCKYGKIK-EARDVFDTMAMKGQN--PNVFSYTIMLNGYATKGCLVDMTD 380
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ M +G+ PD+ T ++++ ++ G + KA+ + + D G+K D + V+ LC
Sbjct: 381 LFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 440
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ + A FN M + V + Y+ +I G+ G +++ + ++ EI+ G D +
Sbjct: 441 RIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 500
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
FS +I L + GR+ DA +FD G P Y+ ++ Y VG ++ ++ + M
Sbjct: 501 FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAM 560
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
S EPN Y L++G K ++ + L +F EML +GI PST ++ L G
Sbjct: 561 VSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRT 620
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A + + + + G ++ Y ++LR L + L+ E++ + +
Sbjct: 621 VPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 680
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
IAG+ ++E A + R G P + YS + L+ +E A ++F ++ A
Sbjct: 681 IAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNA 738
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 171/381 (44%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+A D+ ++NV++KA D + ++M GV PD+ T V+ + R G++ A+
Sbjct: 390 IAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 449
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS-MKGKVLFNVMTYNIVISGW 277
+ ++ D G+ D + + ++ C + A L + M + +++ ++ +I+
Sbjct: 450 EKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 509
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
KLG+V++ + + V G P ++ +S L++G G+++ A+ VFD M G P+
Sbjct: 510 CKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPND 569
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +++ Y +G DE + ++ M +P+ Y +I GL ++ + A F E
Sbjct: 570 VVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHE 629
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M + GI + T L L A+ ++K+ R + K+++ ++ + +
Sbjct: 630 MTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRR 689
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
DL+ + SG Y +I L G +E A + G P + +
Sbjct: 690 VEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNH 749
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ +LL N++ A KI
Sbjct: 750 VVRELLKKNEIVRAGAYLSKI 770
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 165/356 (46%), Gaps = 1/356 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V +M + + PD+ TLS++M S + G++ +A + + G + S ++L
Sbjct: 311 VFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYA 370
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ + + LF+ M G + ++ T+N++I ++ G + + + E+ G PD +
Sbjct: 371 TKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVV 430
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T+ +I L R G++DDA+E F+ M ++G PD AY+ +I + + G + + +
Sbjct: 431 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEI 490
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ ++ ++ +I+ L K +V DA +F+ ++ G+ P+ + ++ C G
Sbjct: 491 MNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKM 550
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+ ++ G + + Y L+ G+ L L+ EM + G +Y +
Sbjct: 551 EKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 610
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I GL G+ A + E G ++ Y+ + L + + A LF++++
Sbjct: 611 IDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELR 666
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 163/353 (46%), Gaps = 12/353 (3%)
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVL--WCLCQRLHVGA 251
++P T +I+MD RA + A+ G+L GL+ + N +L +C +R
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166
Query: 252 ASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG---FSPDSLTFSFL 308
L + + + +V +Y+I++ G+ + + +L+ ++AEG SPD + +S +
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR-MMAEGGAVCSPDVVAYSTV 225
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I+G + G ++ A ++F M ++G PD Y++V+ D+ + + M +
Sbjct: 226 IDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 285
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
PN TY LI G + + +A+ VF+EM I+P T++ + LC YG A
Sbjct: 286 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 345
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIA 485
++ G ++ +Y ++L +G+ G L+D L+ M G D + +I
Sbjct: 346 VFDTMAMKGQNPNVFSYTIML---NGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIK 402
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
N G L+ A+++ E G P + Y + L K++ A F ++
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 455
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 153/327 (46%), Gaps = 1/327 (0%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
G P + +++M F +AG V A + + GL+ S N ++ C+ V
Sbjct: 243 GYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEG 302
Query: 253 SSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
L M+ + V +V T++ +I+G K G++ E + E+ G P+ +TF+ LI+G
Sbjct: 303 FRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDG 362
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
+ G++D A++ F M +G PD YNA+I+ VGD E + M++ +P+
Sbjct: 363 QCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPD 422
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
T+T LI G K + ALE+ M++ GI T+ + LC G H A M
Sbjct: 423 KITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLT 482
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
G K Y +++ G M L EMQ G+ Y ++ GLC G
Sbjct: 483 DMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQG 542
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKL 518
Q++NA ++++ L G P+ + Y+ L
Sbjct: 543 QMKNAKMLLDAMLNVGVAPNDITYNIL 569
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 144/300 (48%), Gaps = 1/300 (0%)
Query: 237 NVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
NV++ C+ VG A +F+ + + L V+++N +ISG K G V E R+ + +
Sbjct: 252 NVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMES 311
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
EG PD TFS LI GL + GR+D+ +FD M +G P+ + +I G D
Sbjct: 312 EGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDL 371
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+K ++ M + P++ TY LI+GL K + +A + EM G+ P T T+ ++
Sbjct: 372 ALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLID 431
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
C G +A+ + ++ + G +L A+ L+ L G+ + +M +G+
Sbjct: 432 GCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKP 491
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
D Y VI C G ++ +++E G P + Y+ L N L ++++A L
Sbjct: 492 DDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLL 551
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 136/297 (45%), Gaps = 4/297 (1%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M EGV PD+ T S +++ + G++ + + + GL + + ++ C+
Sbjct: 309 MESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGK 368
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
V A F M + V +++TYN +I+G K+G + E R++ E+ A G PD +TF+
Sbjct: 369 VDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTT 428
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI+G + G ++ A+E+ M E+G D A+ A+IS G + + M S
Sbjct: 429 LIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAG 488
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
+P+ TYT +I K V ++ +EM G VP T + + LC G A
Sbjct: 489 FKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAK 548
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
M+ VG + Y +L L G K G +D+ E G +D Y ++
Sbjct: 549 MLLDAMLNVGVAPNDITYNIL---LDGHSKHGSSVDVDIFNSEKGLVTDYASYTALV 602
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 120/251 (47%), Gaps = 3/251 (1%)
Query: 284 VEMER---VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
VE+ER + E++ G+ P F+ L+ G +AG + +A VFD + ++G P ++
Sbjct: 227 VEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSF 286
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +IS GD +E + M S P++ T++ LI+GL K ++ + +F+EM
Sbjct: 287 NTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCG 346
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
RG+VP+ T T+ ++ C G A+ ++ G + L Y L+ L G
Sbjct: 347 RGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKE 406
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L +EM SG D + +I G C G +E+A+ + + +G + ++ L +
Sbjct: 407 ARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALIS 466
Query: 521 KLLASNKLESA 531
L ++ A
Sbjct: 467 GLCREGRVHDA 477
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 121/264 (45%), Gaps = 1/264 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V DV +++ ++ L + D + +M G+ P+ T + ++D + G+V A+
Sbjct: 314 VCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLAL 373
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
+ + G++ D + N ++ LC+ + A L N M L + +T+ +I G
Sbjct: 374 KNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGC 433
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G + + + +V EG D + F+ LI GL R GR+ DA + M G PD
Sbjct: 434 CKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDD 493
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y VI + GD K K M S P + TY L++GL K ++ +A + +
Sbjct: 494 PTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDA 553
Query: 398 MLDRGIVPSTGTITSFLEPLCSYG 421
ML+ G+ P+ T L+ +G
Sbjct: 554 MLNVGVAPNDITYNILLDGHSKHG 577
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 82/184 (44%), Gaps = 37/184 (20%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D ++ ++ L R +L+DM G PD T ++V+D F + G V ++L
Sbjct: 457 DDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLL 516
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLG 281
++ G HV V+TYN +++G K G
Sbjct: 517 KEMQSDG-------------------HVPG---------------VVTYNALMNGLCKQG 542
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
Q+ + +L ++ G +P+ +T++ L++G + G D +++F++ EKG D +Y
Sbjct: 543 QMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVD-VDIFNS--EKGLVTDYASYT 599
Query: 342 AVIS 345
A+++
Sbjct: 600 ALVN 603
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L+ E+ +SGYP + ++ G C G + NA LV +E ++G P+ + ++ L +
Sbjct: 235 LYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCC 294
Query: 524 ASNKLESAYNL 534
S +E + L
Sbjct: 295 KSGDVEEGFRL 305
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 184/396 (46%), Gaps = 20/396 (5%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A + +YNV++ L ++ + +M G+ P+++ ++++ S AG++ +A+Q
Sbjct: 204 APNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQ 263
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM----KGKVLFNVMTYNIVIS 275
+LG ++D G D + N L LC+ VG + F + G + Y+ +I
Sbjct: 264 LLGSMKDKGCLPDEVTYNAFLSGLCK---VGRVNEAFQRLVMLQDGGFALGLKGYSCLID 320
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G + + E K ++ SPD + ++ +I G AGRI+DA+ D MK+KG P
Sbjct: 321 GLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVP 380
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
DT YN V+ GD + M N + T T +I GL K V +A+++F
Sbjct: 381 DTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIF 440
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR-----KVGCKLSLTAYKLL-- 448
+EM + G P+ T + ++ G A M++ K + +L+L A ++
Sbjct: 441 DEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDS 500
Query: 449 --LRRL-SGFGKCGMLL---DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
LR+L + G +L L + +SG D Y +I GLC L+ AV + +E
Sbjct: 501 ESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKE 560
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
KG P + Y L + LL +++ A LF+ I
Sbjct: 561 LQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNI 596
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 160/360 (44%), Gaps = 1/360 (0%)
Query: 182 MCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLW 241
M + L+D G+ + ++ + AG+ A+Q R+++F + A N +L
Sbjct: 121 MFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILK 180
Query: 242 CLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
L + A +L+N M N TYN+++ G K G + ++ E++ G P
Sbjct: 181 ALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMP 240
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
+ ++ L+ L AG+ID+A+++ +MK+KGC PD YNA +S VG +E +
Sbjct: 241 NVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRL 300
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
+ + Y+ LI GL ++R+ + ++ ML+R I P T +
Sbjct: 301 VMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEA 360
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
G A+ +K G Y +L+ L G L EM ++ D
Sbjct: 361 GRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQ 420
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+I GLC G ++ A+ + +E G P+ + Y+ L + +LE A LF K+++
Sbjct: 421 TIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM 480
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 168/416 (40%), Gaps = 35/416 (8%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
FL +K KG + D V L G + L E + N+ D +
Sbjct: 369 FLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEML---------QNNLVLDSTT 419
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
+++ L +R D + +M + G +P + T + ++D F R G RLE
Sbjct: 420 QTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREG----------RLE 469
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFN--SMKGKVLFNVMTYNIVISGWSKLGQV 283
+ + F ++ +G SLF ++ + + + ++ + GQV
Sbjct: 470 EARMLF-------------HKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQV 516
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
++ ++L+ I+ G PD +T++ LI GL +A +D A+ +F ++ KG PD Y +
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTL 576
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I + ++ M ++ + P++ Y ++ L + +K++ A+ ++ + L +
Sbjct: 577 IDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKY 636
Query: 404 -VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P + + G + K + +S Y + L L + L
Sbjct: 637 NFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDAL 696
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
++H +QE G +I LC L AV +M +L K S+ V ++L
Sbjct: 697 RIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRL 752
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 204/436 (46%), Gaps = 9/436 (2%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
V L ++ + DA+ S + V K + + S EA+ + A + + DV
Sbjct: 181 VLLHRMSELSCVPDAI-------SYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVV 233
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S+N ++ ++ CN+ ++M ++GV PD+ T + ++D+ +A + KA +L ++
Sbjct: 234 SFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQM 293
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
D G++ D + N ++ H ++ +F M K L + +T++ +S K G+
Sbjct: 294 VDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRS 353
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ E + + + +G PD +++S L+ G GR D +F +M +KG + + N +
Sbjct: 354 KDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINIL 413
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS + G DE M + M PN+ TY+ LIS + ++ADA+E F +M+ GI
Sbjct: 414 ISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGI 473
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC-KLSLTAYKLLLRRLSGFGKCGMLL 462
P+T S + C +G A + G + ++ + ++ L G+
Sbjct: 474 EPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQ 533
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
D+++ + G + +I G C +G++E A V++ + G P + + L +
Sbjct: 534 DVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGY 593
Query: 523 LASNKLESAYNLFRKI 538
S K++ LFR++
Sbjct: 594 CKSGKIDDGLILFREM 609
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 175/380 (46%), Gaps = 2/380 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ SY++++ F M N+ MA +G+ + ++I++ + + G + +A+ +
Sbjct: 371 DIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVF 430
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKL 280
++ G++ + + + ++ C+ + A F+ M + N Y+ +I G+
Sbjct: 431 TEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMH 490
Query: 281 GQVVEMERVLKEIVAEGFS-PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G +V+ + + E++++G P+ + FS +I L GR+ DA +VF+ + G P
Sbjct: 491 GDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVT 550
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
+N++I Y VG ++ M S EP++ T L+SG KS K+ D L +F EML
Sbjct: 551 FNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREML 610
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
+ + P+T T L+ L G AA M+ + G + + YK+LL+ L
Sbjct: 611 HKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTD 670
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ L+H++ D I +I L + + E A + G P+ Y +
Sbjct: 671 EAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMI 730
Query: 520 NKLLASNKLESAYNLFRKIK 539
LL +E A +F ++
Sbjct: 731 RNLLKEGSVEEADTMFSSME 750
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 152/345 (44%), Gaps = 4/345 (1%)
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG-AASSLF 256
+ T I+MD RA + + RL GLK L CLC A L
Sbjct: 124 VRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLL 183
Query: 257 NSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG--FSPDSLTFSFLIEGLG 313
+ M + + ++YN VI + E +++ + EG SPD ++F+ +I G
Sbjct: 184 HRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFF 243
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+ G + A +F+ M +KG PD YN+++ D+ + M EP+
Sbjct: 244 KQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGV 303
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
TY +I G S ++ ++F +M +G++P T T +SF+ LC +G A +++
Sbjct: 304 TYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYM 363
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
G + +Y +LL + G+ + +L+H M + G S+ +I+ G +
Sbjct: 364 TTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMM 423
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ A+LV E +G P+ + YS L + +L A F ++
Sbjct: 424 DEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQM 468
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 115/266 (43%), Gaps = 1/266 (0%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
G P + T + ++D + G++ KA +L + G++ D + N ++ C+ +
Sbjct: 543 GDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDG 602
Query: 253 SSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
LF M KV +TYNIV+ G + G+ +++ E++ G + D T+ L++G
Sbjct: 603 LILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKG 662
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
L R D+AI +F + C D N +I+ V +E + +S+ PN
Sbjct: 663 LCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPN 722
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+ TY +I LLK V +A +F M G PS+ + + L G A
Sbjct: 723 VSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMS 782
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGK 457
K L + LL+ S GK
Sbjct: 783 KVDGTIISLEASTTSLLMSLFSSKGK 808
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/450 (20%), Positives = 184/450 (40%), Gaps = 69/450 (15%)
Query: 47 MSSLDEHHVLKELSDLFQ-ISSHNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGV 105
MSSL +H K+ ++FQ +++ P++ S LL G
Sbjct: 344 MSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYS----------------ILLHGYATEGR 387
Query: 106 F------LQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNV 159
F + KG++ + +N+ ++ RG + EAM++F ++ V
Sbjct: 388 FADMNNLFHSMADKGIVSNC-HCINI-----LISAHAKRGMMD-EAMLVF--TEMQGQGV 438
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
+V +Y+ ++ A R S M G+ P+ ++ F G + KA +
Sbjct: 439 RPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKE 498
Query: 220 MLGRLEDFGL-KFDAESLNVVLWCLCQR-------------LHVGAASSL--FNSM-KGK 262
+ + GL + + + ++ LC +H+G ++ FNS+ G
Sbjct: 499 FISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGY 558
Query: 263 VLF--------------------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
L +V+T N ++SG+ K G++ + + +E++ + P +
Sbjct: 559 CLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTT 618
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+T++ +++GL RAGR A ++F M + G D + Y ++ DE + +
Sbjct: 619 VTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHK 678
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
+ + +C+ ++ +I+ L K R+ +A ++F + G+VP+ T + L G
Sbjct: 679 LGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGS 738
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
A M+ K GC S ++R L
Sbjct: 739 VEEADTMFSSMEKSGCAPSSRLLNDIIRML 768
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 1/196 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV + N +V + D + +M + V P T +IV+D +RAG+ A
Sbjct: 579 IEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAK 638
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGW 277
+M + D G D ++ ++L LC+ A +LF+ + F++ N +I+
Sbjct: 639 KMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINAL 698
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K+ + E + I G P+ T+ +I L + G +++A +F +M++ GC P +
Sbjct: 699 YKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSS 758
Query: 338 NAYNAVISNYISVGDF 353
N +I + GD
Sbjct: 759 RLLNDIIRMLLQKGDI 774
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 159/333 (47%), Gaps = 1/333 (0%)
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
S++ + G P ++ +I+++ F + G + A + + GL+ S N ++ LC+
Sbjct: 212 SEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKS 271
Query: 247 LHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
++ L +M+ ++ +V TY+++I G K G++ E++ E+ G P+ +TF
Sbjct: 272 RNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITF 331
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LI+G R+ RID A+ + M G PD YN +++ VGD ++ K M
Sbjct: 332 TALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRM 391
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
+P+ TYT LI G K + A+E+ + M + G+V T+ + C G
Sbjct: 392 VGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRD 451
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A ++ + G K Y +++ G M L EMQ +G+ Y ++
Sbjct: 452 AERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMN 511
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
GLC GQ++NA +++E L G P + Y+ L
Sbjct: 512 GLCKQGQMKNANMLLEAMLNLGVTPDDITYNIL 544
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 123/274 (44%)
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V YNI+I+ + K G + + + + EI G P +++F+ LI GL ++ +D+ +
Sbjct: 223 VQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKK 282
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
TM+E PD Y+ +I G D + + M PN T+T LI G +SR
Sbjct: 283 TMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSR 342
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
++ A+ + +ML G+ P + L LC G + A + + R VG K Y
Sbjct: 343 RIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYT 402
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+ G +++ M E G D + +I+G C G++ +A + E +
Sbjct: 403 TLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEA 462
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
G P Y+ + + ++ + L ++++I
Sbjct: 463 GMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQI 496
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 114/247 (46%)
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
EI+ GF P ++ LI + G I DA +F+ ++++G P T ++N +I+
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
+ DE + K M P++ TY+ LI GL K ++ A ++F+EM RG+ P+ T T
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFT 332
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
+ ++ C +AM Y + +G K L Y LL L G L EM+
Sbjct: 333 ALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMV 392
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G D Y +I G C G LE+A+ + + +G + ++ L + ++ A
Sbjct: 393 GMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDA 452
Query: 532 YNLFRKI 538
R++
Sbjct: 453 ERTLREM 459
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 93/187 (49%), Gaps = 4/187 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +Y ++ + + + M +EGV D + ++ F R G+V A + L
Sbjct: 397 DKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTL 456
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
+ + G+K D + +V+ C++ +V L M+ V+TYN++++G K
Sbjct: 457 REMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQ 516
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
GQ+ +L+ ++ G +PD +T++ L+EG + G+ +D +++ + EKG D Y
Sbjct: 517 GQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRN---EKGLIVDYAYY 573
Query: 341 NAVISNY 347
+++S Y
Sbjct: 574 TSLVSEY 580
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 196/435 (45%), Gaps = 11/435 (2%)
Query: 106 FLQKLKGKGVIED-ALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
L ++K D L+NV +D VGKV M F +K + D
Sbjct: 260 LLDEMKSNSFTADLVLYNVCID-CFGKVGKV---------DMAWKFFHEMKAQGLVPDDV 309
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y ++ L + + D + ++ P + + ++ + AG+ +A +L R
Sbjct: 310 TYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQ 369
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVV 284
+ G + N +L CL ++ V A + + M+ N+ TYNI+I K G++
Sbjct: 370 KRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTYNILIDMLCKAGELE 429
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+V + G P+ +T + +I+ L +A ++D+A +F + K C PD+ + ++I
Sbjct: 430 AALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLI 489
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
G D+ Y+ M + PN+ YT LI K + D ++++EM+ RG
Sbjct: 490 DGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCS 549
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P + S+++ + G ++++ + G + +Y +L+ L G L
Sbjct: 550 PDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKL 609
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
++EM+E G D Y VI G C G+++ A ++EE KG P+ + Y + + L
Sbjct: 610 FYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAK 669
Query: 525 SNKLESAYNLFRKIK 539
++L+ AY LF + K
Sbjct: 670 IDRLDEAYMLFEEAK 684
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 200/434 (46%), Gaps = 11/434 (2%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
F ++K +G++ D D++ + V+ + EA+ LF + V +
Sbjct: 295 FFHEMKAQGLVPD-------DVTYTTLIGVLCKARRLDEAVELFEELDLNRS--VPCVYA 345
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN ++ G FD ++L ++G P + + ++ R G+V +A+++ +
Sbjct: 346 YNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR 405
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVV 284
+ + N+++ LC+ + AA + ++MK LF N+MT NI+I K ++
Sbjct: 406 QDAAP-NLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLD 464
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E + + + SPDS TF LI+GLGR GR+DDA +++ M + P+ Y ++I
Sbjct: 465 EACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLI 524
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
N+ G ++ K YK M C P++ + + K+ +V +FEE+ +G+V
Sbjct: 525 QNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLV 584
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P + + + L G ++ + ++ G L + AY ++ GK L
Sbjct: 585 PDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQL 644
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
EM+ G Y V+ GL I +L+ A ++ EE+ G + ++YS L +
Sbjct: 645 LEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGK 704
Query: 525 SNKLESAYNLFRKI 538
+++ AY + ++
Sbjct: 705 VGRIDEAYLILEEL 718
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 179/398 (44%), Gaps = 3/398 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA +F + H + D +++ ++ LGRR D ++ M P++ +
Sbjct: 465 EACSIFL--GLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTS 522
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++ +F + G+ ++ + G D LN + C+ + V +LF +K +
Sbjct: 523 LIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQG 582
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
L +V +Y+I+I G K G E ++ E+ +G D L ++ +I+G ++G++D A
Sbjct: 583 LVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAY 642
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
++ + MK KG P Y +V+ + DE ++ S + N+ Y+ LI G
Sbjct: 643 QLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGF 702
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K ++ +A + EE++ +G+ P++ T L+ L A + ++ + + C +
Sbjct: 703 GKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNA 762
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y +++ L K W EMQ+ G + Y +IAGL G + A + +
Sbjct: 763 MTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDR 822
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
G P Y+ + L ++NK AY +F + ++
Sbjct: 823 FKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRL 860
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/473 (21%), Positives = 206/473 (43%), Gaps = 53/473 (11%)
Query: 114 GVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVL--------FFNWAIKHPNVAKDVKS 165
GV+E+ LW +V+ +L+V ++ + G L +F W + A +
Sbjct: 76 GVLENGLWGPDVEEALNVFDEMSQPEVIVGVMKRLKDVNVAFQYFRWVERKTQQAHCPEV 135
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA-------- 217
YN + + R + D++ +L +M+ G ++ SF+++ ++ +A
Sbjct: 136 YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMR 195
Query: 218 ---------------------------IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+ + ++++ G + + ++ + +
Sbjct: 196 KFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRID 255
Query: 251 AASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
AA SL + MK +++ YN+ I + K+G+V + E+ A+G PD +T++ LI
Sbjct: 256 AALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLI 315
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
L +A R+D+A+E+F+ + P AYN +I Y S G FDE + C
Sbjct: 316 GVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCI 375
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P++ Y +++ L + KV +AL + +EM + P+ T ++ LC G AA+ +
Sbjct: 376 PSVIAYNCILTCLGRKGKVEEALRIHDEM-RQDAAPNLTTYNILIDMLCKAGELEAALKV 434
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGK----CGMLLDLWHEMQESGYPSDGEIYEYVIA 485
++ G ++ +++ RL K C + L L H++ D + +I
Sbjct: 435 QDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKV----CSPDSRTFCSLID 490
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GL G++++A + E+ L P+ +VY+ L + E + +++++
Sbjct: 491 GLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEM 543
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 178/370 (48%), Gaps = 7/370 (1%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ +M G +PDL L+ MD +AG+V K + ++ GL D S ++++ L
Sbjct: 539 IYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLV 598
Query: 245 QRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ LF MK + L +V+ YN VI G+ K G+V + ++L+E+ +G P +
Sbjct: 599 KAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVV 658
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T+ +++GL + R+D+A +F+ K G + Y+++I + VG DE + +
Sbjct: 659 TYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEEL 718
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
PN T+ L+ L+K+ ++ +A F+ M + P+ T + + LC
Sbjct: 719 MQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKF 778
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIY 480
+ A + +++ +K G K + Y + ++G K G +++ L+ + SG D Y
Sbjct: 779 NKAFVFWQEMQKQGLKPNNITYTTM---IAGLAKAGNVMEARGLFDRFKASGGVPDSACY 835
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+I GL + + +A +V EE+ KG + L + L ++ LE A + ++
Sbjct: 836 NAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLRE 895
Query: 541 ARQNDYARRL 550
++ +A RL
Sbjct: 896 MAKSQHATRL 905
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 88/228 (38%)
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
+ R +D ++ + M G G + ++++++ E + M + P
Sbjct: 143 MARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPA 202
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
YT LI L + + L +F +M + G + T+ + G AA+ +
Sbjct: 203 FSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLD 262
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ + L Y + + GK M +HEM+ G D Y +I LC
Sbjct: 263 EMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKAR 322
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+L+ AV + EE P Y+ + ++ K + AY+L + K
Sbjct: 323 RLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQK 370
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 174/371 (46%), Gaps = 1/371 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y+VI++A R F VL D+ G D+ ++V+++ G V +A+ +L L
Sbjct: 197 YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLP 256
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVV 284
FG + D S N VL LC G L M + N++T+N +IS + G
Sbjct: 257 SFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFE 316
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ VL ++V G +PD ++ +I+G+ + G ++ A E+ + M G P+ YN ++
Sbjct: 317 RVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLL 376
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
S ++E + M +C + T+ L+ ++ V +E+ E+ML+ G +
Sbjct: 377 KGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCM 436
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P T T+ + C G A+M+ K GCK + +Y ++L+ L + DL
Sbjct: 437 PDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDL 496
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+M + G P + + +I LC G +E A+ ++++ L G P + YS + + L
Sbjct: 497 MSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK 556
Query: 525 SNKLESAYNLF 535
+ K + A L
Sbjct: 557 AGKTDEALELL 567
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 204/468 (43%), Gaps = 45/468 (9%)
Query: 107 LQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSY 166
L+ L +G D + N N+ V+ + ++G++ EA+ L + + DV SY
Sbjct: 217 LEDLHARGCALD-VGNCNL-----VLNAICDQGSVD-EALHLLRD--LPSFGCEPDVVSY 267
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
N ++K L K + + ++ +M + P++ T + ++ R G + ++L ++ +
Sbjct: 268 NAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVE 327
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVE 285
G D ++ +C+ H+ A + N M L NV+ YN ++ G + E
Sbjct: 328 HGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEE 387
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
E +L E+ + D +TF+ L++ + G +D IE+ + M E GC PD Y VI+
Sbjct: 388 TEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVIN 447
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+ G DE + K M++ C+PN +YT ++ GL + + DA ++ +M+ +G
Sbjct: 448 GFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPL 507
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
+ T + + LC G A+ + K+ GC L +Y ++ L GK L+L
Sbjct: 508 NPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELL 567
Query: 466 HEM-----------------------------------QESGYPSDGEIYEYVIAGLCNI 490
+ M Q++ SD +Y VI+ LC
Sbjct: 568 NVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKR 627
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G+ E A+ + + G P+ Y+ L L + ++ A + ++
Sbjct: 628 GETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTEL 675
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 143/333 (42%), Gaps = 6/333 (1%)
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLF 265
+ RAGQ+ A ++ + + +A + V+ LC R + A ++ + M +G
Sbjct: 137 YCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPI 193
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
M Y++++ + G RVL+++ A G + D + ++ + G +D+A+ +
Sbjct: 194 PPM-YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLL 252
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ GC PD +YNAV+ + + + M C PN+ T+ LIS L ++
Sbjct: 253 RDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRN 312
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
EV +M++ G P + ++ +C G A + + G K ++ Y
Sbjct: 313 GLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCY 372
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
LL+ L + +L EM + P D + ++ C G ++ + ++E+ L
Sbjct: 373 NTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLE 432
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P + Y+ + N ++ A L + +
Sbjct: 433 HGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 465
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 117/269 (43%), Gaps = 3/269 (1%)
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
YN +++G+ + GQ +E + A P++ T+ ++ L GRI DA+ V D M
Sbjct: 130 YNAMVAGYCRAGQ---LESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
+GC P Y+ ++ G F ++ + + + C ++ +++ + V
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
+AL + ++ G P + + L+ LC + ++ ++ C ++ + L+
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
L G + ++ +M E G D +Y +I G+C G LE A ++ G
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ + Y+ L L ++ + E L ++
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEM 395
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 170/378 (44%), Gaps = 1/378 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D+++YN +++ + + + +L ++ KE + + +++ G + +A
Sbjct: 403 IKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRAN 462
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
++ + +GLK + ++ L + A + MK + L +V YN VI G+
Sbjct: 463 ELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGF 522
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G++ E + L E++A+G P+ T+ I G RAG + A F M + G P+
Sbjct: 523 CKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPND 582
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+I Y G+ + ++ M P++ T++ LI GL K+ K+ +A+ VF E
Sbjct: 583 VICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSE 642
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+LD+G+VP T TS + LC G AA ++ K G ++ Y L+ L G+
Sbjct: 643 LLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGE 702
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+L+ + E G + Y +IAG C L A + G P VY
Sbjct: 703 IAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCA 762
Query: 518 LSNKLLASNKLESAYNLF 535
L + + E A +LF
Sbjct: 763 LIDGCCKAGNTEKALSLF 780
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 167/385 (43%), Gaps = 8/385 (2%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
IK N+ + IV L + +M G+ P++ + ++ ++ G+
Sbjct: 433 IKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGR 492
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
+AI++LG ++D GL D N V+ C+ + S M K L NV TY
Sbjct: 493 FEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGA 552
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
I G+ + G++ ER E++ G +P+ + + LI+G + G A F M ++G
Sbjct: 553 FIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQG 612
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD ++ +I G E M + + P++ TYT LIS L K + A
Sbjct: 613 VLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAF 672
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
E+ ++M +GI P+ T + + LC G A ++ + G + Y + +
Sbjct: 673 ELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTI---I 729
Query: 453 SGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
+G+ K L + L+H M+ G P D +Y +I G C G E A+ + + +G
Sbjct: 730 AGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI- 788
Query: 510 PSRLVYSKLSNKLLASNKLESAYNL 534
S ++ L + KL AY L
Sbjct: 789 ASTPAFNALIDGFFKLGKLIEAYQL 813
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 174/365 (47%), Gaps = 7/365 (1%)
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ F F C M +GV PD++T S+++ + G++ +A+ + L D GL D +
Sbjct: 600 KAFAKFRC-----MLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFT 654
Query: 236 LNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
++ LC+ + AA L + M K + N++TYN +I+G KLG++ + + I
Sbjct: 655 YTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIP 714
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
+G + +S+T+S +I G ++ + +A ++F MK G PD+ Y A+I G+ +
Sbjct: 715 EKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTE 774
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ + + GM + + LI G K K+ +A ++ E+M+D I P+ T T +
Sbjct: 775 KALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILI 833
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
E C+ G A ++ + +K ++ Y LL + G+ + L+ EM G
Sbjct: 834 EYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIK 893
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
D + ++ G A+ ++++ L +G + +Y+ L + L N L +
Sbjct: 894 PDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKV 953
Query: 535 FRKIK 539
+++
Sbjct: 954 LDEVE 958
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 170/394 (43%), Gaps = 5/394 (1%)
Query: 152 WAIKHPNVAKDVK----SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
+ +K A+ +K +Y ++ L + + ++ S+M G+ PD++T + +++
Sbjct: 357 FQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEG 416
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-N 266
+ + + KA ++L ++ L +A ++ LC + A+ LF M L N
Sbjct: 417 YYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPN 476
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
++ Y ++ G K G+ E ++L + +G SPD ++ +I G +AG++++
Sbjct: 477 IVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLV 536
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M KG P+ Y A I Y G+ + + M PN T LI G K
Sbjct: 537 EMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDG 596
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
A F MLD+G++P T + + L G AM ++ + G + Y
Sbjct: 597 NTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYT 656
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+ L G +L +M + G + Y +I GLC +G++ A + + K
Sbjct: 657 SLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEK 716
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
G + + YS + S L A+ LF +K+
Sbjct: 717 GLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKL 750
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 181/417 (43%), Gaps = 31/417 (7%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FFNW ++++ +++++ L F NVL M + NP ++ ++DS
Sbjct: 93 FFNWVNSRTVFSQNLSTFSILSLILCNSGLFGNAANVLERMI-DTRNPHVK----ILDSI 147
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDA--------ESLNVVLWCLCQRLHVGAASS------ 254
I+ + + F + D E+++V L VG A
Sbjct: 148 IKCYKEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKD 207
Query: 255 ------------LFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
++ M G ++ +V TY +I+ + ++G+V E + VL ++ +G P+
Sbjct: 208 LLKGNRVELFWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNL 267
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+T+S +I GL RAG +D+A+E+ +M KG PD Y +I + E
Sbjct: 268 VTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDE 327
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M + +P+ YT LI+G +K + A +V EEM R I +T T + + LC G
Sbjct: 328 MYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGD 387
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A ++ + +G K + Y L+ +L E+++ ++ +
Sbjct: 388 LEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGA 447
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ GLC+ G L A + +E + G P+ ++Y+ + L+ + E A + +K
Sbjct: 448 IVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMK 504
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 155/341 (45%), Gaps = 1/341 (0%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
PD+ T + +++++ R G+V + +L +E+ G + + +VV+ LC+ V A L
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALEL 289
Query: 256 FNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
SM K +L + Y +I G+ + + E + +L E+ G PD + ++ LI G +
Sbjct: 290 KRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVK 349
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
I A +V + M + +T Y A+I +GD ++ + M+ +P++ T
Sbjct: 350 QSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQT 409
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y LI G K + + A E+ E+ + + + + LC G A ++++
Sbjct: 410 YNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMI 469
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G K ++ Y +++ L G+ + + M++ G D Y VI G C G++E
Sbjct: 470 SWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKME 529
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ E + KG P+ Y + + ++++A F
Sbjct: 530 EGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSF 570
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/410 (19%), Positives = 175/410 (42%), Gaps = 76/410 (18%)
Query: 92 VDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFN 151
+D+ +LP+ + V + L G +++A+ V +++++G
Sbjct: 609 LDQGVLPDVQTHSVLIHGLSKNGKLQEAM---------GVFSELLDKG------------ 647
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
+ DV +Y ++ L + + DM K+G+NP++ T + +++ +
Sbjct: 648 -------LVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKL 700
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK----------- 260
G++ KA ++ + + GL ++ + + ++ C+ ++ A LF+ MK
Sbjct: 701 GEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVY 760
Query: 261 ---------------------GKV---LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAE 296
G V + + +N +I G+ KLG+++E ++++++V
Sbjct: 761 CALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDN 820
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
+P+ +T++ LIE G I +A ++F M+++ P+ Y +++ Y +G E
Sbjct: 821 HITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEM 880
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
+ M + +P+ ++ ++ LK AL++ ++ML G+ T ++
Sbjct: 881 FSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDA 940
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
LC + + + + K G KLSL CG L+ +H
Sbjct: 941 LCKHNNLSEVLKVLDEVEKQGSKLSLAT-------------CGTLVCCFH 977
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 130/287 (45%), Gaps = 6/287 (2%)
Query: 114 GVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKAL 173
G+ E L +V S + G NL+ EA LF +K V D Y ++
Sbjct: 712 GIPEKGLARNSVTYSTIIAG-YCKSANLT-EAFQLFH--GMKLVGVPPDSFVYCALIDGC 767
Query: 174 GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA 233
+ + ++ M +EG+ + ++D F + G++ +A Q++ + D + +
Sbjct: 768 CKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNH 826
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
+ +++ C ++ A LF M+ + V+ NV+TY ++ G++++G+ EM + E
Sbjct: 827 VTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDE 886
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+VA G PD L +S +++ + G A+++ D M +G N Y +I +
Sbjct: 887 MVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNN 946
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
E +K + + ++ T L+ ++ + +AL V E M+
Sbjct: 947 LSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMV 993
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 177/370 (47%), Gaps = 20/370 (5%)
Query: 125 VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCN 184
VD + V+GK++ G F A+ ++ + + +A+ +FFD
Sbjct: 135 VDFAFSVLGKIIKLG---------FEPDAVTFSSLINGLCFEDKFARAM---EFFD---- 178
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+M G P+L T + ++ F + G+ A+ +L +++ G + D N ++ LC
Sbjct: 179 ---EMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLC 235
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ V A +F+ +KGK V +V TY+I++ G Q E + E+++ PD +
Sbjct: 236 KDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVV 295
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
TF+ L++ L + G + +A + M EKG P+ YN++++ Y E + M
Sbjct: 296 TFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAM 355
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ C PN+ +Y LI+G K++++ +A E+F+EM RG++P+T + + LC G
Sbjct: 356 ITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRH 415
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A ++K + GC L +LL L G L L+ MQ+S + Y+ +
Sbjct: 416 CEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDIL 475
Query: 484 IAGLCNIGQL 493
I + G++
Sbjct: 476 IRAMYKSGKI 485
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 186/398 (46%), Gaps = 4/398 (1%)
Query: 144 EAMVLFFNWAI-KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
E + FN I KHP + ++ ++ AL R K + + ++ + + D+ +
Sbjct: 66 EDALFSFNHMIHKHP--LPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFN 123
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK 262
I+++ F R +V A +LG++ G + DA + + ++ LC A F+ M
Sbjct: 124 ILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVAS 183
Query: 263 -VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
N+ TYN +I G+ K+G+ +LK++ G PD + ++ +I+GL + + +A
Sbjct: 184 GYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEA 243
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+++F +K KG PD Y+ ++ + +E + M S N P++ T+ L+
Sbjct: 244 LDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDK 303
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L K +++A + + M+++G+ P+ T S + C A M++ GC +
Sbjct: 304 LCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPN 363
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ +Y +L+ + +L+ EM G + Y +I+GLC G+ A + +
Sbjct: 364 VVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFK 423
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ +G P + + L + L L++A LFR ++
Sbjct: 424 DMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQ 461
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 97/221 (43%)
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
I+DA+ F+ M K P ++ ++S + + + + K + E ++ +
Sbjct: 65 IEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNI 124
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
LI+ + ++V A V +++ G P T +S + LC AM + + G
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG 184
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
+ +L Y +++ GK + + L +M ++G D IY +I GLC + A+
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEAL 244
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ E KG P YS L + L S++ E A LF ++
Sbjct: 245 DIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEM 285
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 184/396 (46%), Gaps = 20/396 (5%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A + +YNV++ L ++ + +M G+ P+++ ++++ S AG++ +A+Q
Sbjct: 204 APNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQ 263
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM----KGKVLFNVMTYNIVIS 275
+LG ++D G D + N L LC+ VG + F + G + Y+ +I
Sbjct: 264 LLGSMKDKGCLPDEVTYNAFLSGLCK---VGRVNEAFQRLVMLQDGGFALGLKGYSCLID 320
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G + + E K ++ SPD + ++ +I G AGRI+DA+ D MK+KG P
Sbjct: 321 GLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVP 380
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
DT YN V+ GD + M N + T T +I GL K V +A+++F
Sbjct: 381 DTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIF 440
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR-----KVGCKLSLTAYKLL-- 448
+EM + G P+ T + ++ G A M++ K + +L+L A ++
Sbjct: 441 DEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDS 500
Query: 449 --LRRL-SGFGKCGMLL---DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
LR+L + G +L L + +SG D Y +I GLC L+ AV + +E
Sbjct: 501 ESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKE 560
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
KG P + Y L + LL +++ A LF+ I
Sbjct: 561 LQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNI 596
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 172/392 (43%), Gaps = 20/392 (5%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN I+KAL + + M G P+ T +++MD + G A++M +
Sbjct: 175 YNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEML 234
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
D G+ + + V+L LC + A L SMK K L + +TYN +SG K+G+V
Sbjct: 235 DRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVN 294
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E + L + GF+ +S LI+GL +A R D+ + TM E+ PD Y +I
Sbjct: 295 EAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMI 354
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
G ++ + + M P+ Y ++ L + A + EML +V
Sbjct: 355 RGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLV 414
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD- 463
+ T T + LC G AM ++ + + GC ++ Y L+ GF + G L +
Sbjct: 415 LDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALI---DGFYREGRLEEA 471
Query: 464 --LWHEMQESGYPS-------------DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L+H+M+ PS D E ++ +C GQ+ A ++ + G
Sbjct: 472 RMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGV 531
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
P + Y+ L N L + L+ A LF+++++
Sbjct: 532 VPDVVTYNTLINGLCKARNLDGAVRLFKELQL 563
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 162/370 (43%), Gaps = 1/370 (0%)
Query: 182 MCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLW 241
M + L+D G+ + ++ + AG+ A+Q R+++F + A N +L
Sbjct: 121 MFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILK 180
Query: 242 CLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
L + A +L+N M N TYN+++ G K G + ++ E++ G P
Sbjct: 181 ALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMP 240
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
+ ++ L+ L AG+ID+A+++ +MK+KGC PD YNA +S VG +E +
Sbjct: 241 NVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRL 300
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
+ + Y+ LI GL ++R+ + ++ ML+R I P T +
Sbjct: 301 VMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEA 360
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
G A+ +K G Y +L+ L G L EM ++ D
Sbjct: 361 GRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQ 420
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+I GLC G ++ A+ + +E G P+ + Y+ L + +LE A LF K+++
Sbjct: 421 TIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM 480
Query: 541 ARQNDYARRL 550
RL
Sbjct: 481 GNNPSLFLRL 490
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 168/416 (40%), Gaps = 35/416 (8%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
FL +K KG + D V L G + L E + N+ D +
Sbjct: 369 FLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEML---------QNNLVLDSTT 419
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
+++ L +R D + +M + G +P + T + ++D F R G RLE
Sbjct: 420 QTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREG----------RLE 469
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFN--SMKGKVLFNVMTYNIVISGWSKLGQV 283
+ + F ++ +G SLF ++ + + + ++ + GQV
Sbjct: 470 EARMLF-------------HKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQV 516
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
++ ++L+ I+ G PD +T++ LI GL +A +D A+ +F ++ KG PD Y +
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTL 576
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I + ++ M ++ + P++ Y ++ L + +K++ A+ ++ + L +
Sbjct: 577 IDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKY 636
Query: 404 -VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P + + G + K + +S Y + L L + L
Sbjct: 637 NFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDAL 696
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
++H +QE G +I LC L AV +M +L K S+ V ++L
Sbjct: 697 RIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRL 752
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 207/488 (42%), Gaps = 58/488 (11%)
Query: 102 LRGVFLQKLKGKGVIEDALW---NVNVDLSLDVV--GKVVN---RGNLSGEAMVLFFNWA 153
L +Q L KG I++AL ++ + S +V+ VVN + N EA+ LF +
Sbjct: 148 LHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVITYNTVVNGLCKANRIDEALELFDDME 207
Query: 154 IKHP---NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR 210
++ DV SY+ ++ AL + + D M G P++ T S ++D +
Sbjct: 208 KRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCK 267
Query: 211 AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMT 269
+ + +++L +++ G + N +L L + A F + K NV+T
Sbjct: 268 VDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVT 327
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
YN+ + G K G+V E R+L E+V +PD +T+S +I+G +AGR+D A +VF M
Sbjct: 328 YNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMM 387
Query: 330 EKGCGPDT-----------------------------------NAYNAVISNYISVGDFD 354
C P YN ++ +
Sbjct: 388 VHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVE 447
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
++ Y M +P+ +TY LI L ++R+V +A E + M +VP+ + +
Sbjct: 448 SALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALV 507
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE----MQE 470
E LC G A + +VGC+ +K+L+ L L W ++
Sbjct: 508 EVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEEL-------YLRKKWEAASKLLRS 560
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G+ +D Y +A +C G+ + AV V+E+ + KG P Y + L +++ES
Sbjct: 561 PGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVES 620
Query: 531 AYNLFRKI 538
A F K+
Sbjct: 621 AIAEFEKM 628
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/477 (21%), Positives = 203/477 (42%), Gaps = 41/477 (8%)
Query: 95 FLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAI 154
FL P + + + L LK + L ++ +V G+V+ + A FF WA
Sbjct: 9 FLRPTQDVAEILLGILKPGPYLCRDLAGYASTVTPEVAGRVLQQVEDPDVAWT-FFQWAG 67
Query: 155 KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV 214
P + + V++ A + K + +L + + P+ + V++ F +AGQV
Sbjct: 68 NKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQV 127
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVI 274
+A ++L +++ G+K D + ++ LC++ + A F SM + NV+TYN V+
Sbjct: 128 DQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVITYNTVV 187
Query: 275 SGWSKLGQVVEMERVLKEI-----VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
+G K ++ E + ++ + G PD +++S +I+ L +A R+D A E F M+
Sbjct: 188 NGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMR 247
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECM-------------------------------- 357
GC P+ Y+++I V EC+
Sbjct: 248 AVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQE 307
Query: 358 ---KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
++++ + +PN+ TY + GL K+ +V +A + EM++ + P T +S +
Sbjct: 308 KACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSII 367
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
+ C G A ++ + C + LL S K + +M +G+
Sbjct: 368 DGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFI 427
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
+ Y ++ +C +E+A+ + + RK P Y+ L L + +++ A
Sbjct: 428 PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEA 484
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 189/437 (43%), Gaps = 16/437 (3%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L ++K +GV D L + + L G++ EA+ F + + +V +
Sbjct: 133 LLDEMKERGVKMDVLLHSTLIQGLCRKGRI-------DEALEQFKSMG---EECSPNVIT 182
Query: 166 YNVIVKALGRRKFFDFMCNVLSDM-----AKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
YN +V L + D + DM A G PD+ + S V+D+ +A +V KA +
Sbjct: 183 YNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEY 242
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSK 279
R+ G + + + ++ LC+ L MK K N++ +N ++ K
Sbjct: 243 FKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWK 302
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
+ + + + ++ G P+ +T++ + GL +AGR+D+A + M E PD
Sbjct: 303 NDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVIT 362
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y+++I + G D+ + M + C P+ T+ L+ G + +K +A V E+M+
Sbjct: 363 YSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMV 422
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
+ G +P T ++ +C +A+ +Y K ++ + Y L++ L +
Sbjct: 423 NAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVD 482
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ M+ +G I ++ LC G+++ A V++ + G P + L
Sbjct: 483 EAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILV 542
Query: 520 NKLLASNKLESAYNLFR 536
+L K E+A L R
Sbjct: 543 EELYLRKKWEAASKLLR 559
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 142/331 (42%), Gaps = 43/331 (12%)
Query: 155 KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV 214
K PNV +YNV V L + D +L +M + V PD+ T S ++D F +AG++
Sbjct: 321 KKPNVV----TYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 376
Query: 215 YKAIQMLGRL--------------------------EDFGLKFDA---------ESLNVV 239
KA + R+ E F + D ++ NV+
Sbjct: 377 DKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVL 436
Query: 240 LWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
+ C+C V +A +++ MK K + TY +I + +V E + L + A+
Sbjct: 437 MDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNV 496
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
P+ L+E L + G +D+A V D + E GC P + ++ ++ K
Sbjct: 497 VPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASK 556
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
+ S + TY+ ++ + K+ K +A+EV E+M+ +G+ P GT + L LC
Sbjct: 557 LLR---SPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLC 613
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
+A+ ++K GC L Y LL+
Sbjct: 614 GLDRVESAIAEFEKMASRGCAPGLVTYTLLI 644
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 111/262 (42%), Gaps = 33/262 (12%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V DM G P L+T +++MD A V A+++ +++ + D + ++ CLC
Sbjct: 417 VHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLC 476
Query: 245 QRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV--------- 294
+ V A + M+ V+ N + ++ K G+V E VL +V
Sbjct: 477 RARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGE 536
Query: 295 -----------------------AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+ GF D+ T+S + + +AG+ D+A+EV + M K
Sbjct: 537 TFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLK 596
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G PD Y AV+ + + + + ++ M+S C P + TYT LI + +A
Sbjct: 597 GVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEA 656
Query: 392 LEVFEEMLDRGIVPSTGTITSF 413
+FE M+ G P T+ +
Sbjct: 657 FRIFEAMVAAGFTPQAQTMRTL 678
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 160/394 (40%), Gaps = 33/394 (8%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
++ +N ++ AL + + C + K G P++ T ++ + +AG+V +A ++L
Sbjct: 289 NIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRIL 348
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
+ + + D + + ++ C+ + A +F M + + + +T+ ++ G+S+
Sbjct: 349 LEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEH 408
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ E RV +++V GF P T++ L++ + A ++ A+E++ MK K PD N Y
Sbjct: 409 KKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTY 468
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+I DE ++ M + N PN L+ L K +V +A V + +++
Sbjct: 469 APLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE 528
Query: 401 RGIVPSTGTITSFLEPL--------------------------------CSYGPPHAAMM 428
G P T +E L C G P A+
Sbjct: 529 VGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVE 588
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ ++ G + Y +LR L G + + + +M G Y +I C
Sbjct: 589 VIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEAC 648
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+ + A + E + GF P LS+ L
Sbjct: 649 SADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCL 682
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 3/231 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +Y +++ L R + D L M + V P+ +++ + G+V +A +L
Sbjct: 464 DCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVL 523
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLG 281
+ + G + E+ +++ L R AAS L S + + TY++ ++ K G
Sbjct: 524 DNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRS--PGFVADAATYSLCVAEICKAG 581
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ E V++++V +G PD T+ ++ L R++ AI F+ M +GC P Y
Sbjct: 582 KPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYT 641
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
+I S DE + ++ M + P T R +S L+ D L
Sbjct: 642 LLIGEACSADMADEAFRIFEAMVAAGFTPQAQT-MRTLSSCLRDAGYQDLL 691
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 182/382 (47%), Gaps = 1/382 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D+ ++N+++ ++L M K G PD T+ +++ F R +V A+
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ ++ + G K D + N ++ LC+ V A F ++ K + NV+TY +++G
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ + R+L +++ + +P+ +T+S L++ + G++ +A E+F+ M PD
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y+++++ DE + + M S C ++ +Y LI+G K+++V D +++F E
Sbjct: 296 VTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M RG+V +T T + ++ G A + + G + Y +LL L G+
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L ++ +MQ+ D Y VI G+C G++E A + KG P + Y+
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475
Query: 518 LSNKLLASNKLESAYNLFRKIK 539
+ + L L L+ K+K
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMK 497
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 190/393 (48%), Gaps = 3/393 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF + P + +N ++ A+ + K +D + ++ M G+ DL T +I
Sbjct: 68 DAIDLFSDMVKSRP--FPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
V++ F QV A+ +LG++ G + D ++ ++ C+R V A SL + M +
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+++ YN +I K +V + KEI +G P+ +T++ L+ GL + R DA
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+ M +K P+ Y+A++ ++ G E + ++ M + +P++ TY+ L++GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGL 305
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
++ +A ++F+ M+ +G + + + + C M ++++ + G +
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L++ G + + +M G D Y ++ GLC+ G+LE A+++ E+
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
++ + Y+ + + + K+E A++LF
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 152/294 (51%), Gaps = 6/294 (2%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
I+ + +V +Y +V L + +LSDM K+ + P++ T S ++D+F++ G+
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
V +A ++ + + D + + ++ LC + A+ +F+ M K L +V++YN
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I+G+ K +V + ++ +E+ G +++T++ LI+G +AG +D A E F M G
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD YN ++ G+ ++ + ++ M + ++ TYT +I G+ K+ KV +A
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG-----CKLS 441
+F + +G+ P T T+ + LC+ G H +Y K ++ G C LS
Sbjct: 456 SLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 140/355 (39%), Gaps = 69/355 (19%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
++ SDM K P + + ++ + ++ + I + ++E G++ D + N+V+ C
Sbjct: 71 DLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 130
Query: 244 CQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
C V A S+ LG+++++ G+ PD +
Sbjct: 131 CCCFQVSLALSI------------------------LGKMLKL----------GYEPDRV 156
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T L+ G R R+ DA+ + D M E G PD AYNA+
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI-------------------- 196
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
I L K+++V DA + F+E+ +GI P+ T T+ + LC+
Sbjct: 197 ---------------IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A + K ++ Y LL GK +L+ EM D Y +
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ GLC +++ A + + + KG + Y+ L N + ++E LFR++
Sbjct: 302 VNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 102/225 (45%)
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
R +++DAI++F M + P +N ++S + + +D + K M ++
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
T+ +I+ +V+ AL + +ML G P TI S + C A+ + K
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
++G K + AY ++ L + D + E++ G + Y ++ GLCN +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+A ++ + ++K P+ + YS L + + + K+ A LF ++
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 76/167 (45%)
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
D RL L+ K+ DA+++F +M+ PS L + + + KK
Sbjct: 51 DLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKK 110
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+G + L + +++ + + L + +M + GY D ++ G C +
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ +AV ++++ + G+ P + Y+ + + L + ++ A++ F++I+
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE 217
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 170/345 (49%), Gaps = 4/345 (1%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
PD+ + ++ + GQ+ A +++ D ++ D+ + N ++ LC R G A +
Sbjct: 122 PDVMAYNAMVAGYCVTGQLDAARRLVA---DMPMEPDSYTYNTLIRGLCGRGRTGNALVV 178
Query: 256 FNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
+ M + + +V+TY I++ K + ++L E+ A+G +PD +T++ ++ G+ +
Sbjct: 179 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQ 238
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
GR+DDAIE ++ GC P+T +YN V+ + +++ K MS PN+ T
Sbjct: 239 EGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVT 298
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
+ LIS L + V A+EV +++ G P++ + L C AM +
Sbjct: 299 FNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV 358
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
GC + +Y LL L G+ ++L H++++ G Y VI GL G+ +
Sbjct: 359 SRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTK 418
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
A+ ++ E + KG P + YS +S+ L +++E A F K++
Sbjct: 419 EALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQ 463
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 176/375 (46%), Gaps = 4/375 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN +V D +++DM E PD T + ++ G+ A+ +L
Sbjct: 123 DVMAYNAMVAGYCVTGQLDAARRLVADMPME---PDSYTYNTLIRGLCGRGRTGNALVVL 179
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ G D + ++L C+R A L + M+ K +++TYN+V++G +
Sbjct: 180 DDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQE 239
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+V + LK + + G P++++++ +++GL A R +DA ++ M +KG P+ +
Sbjct: 240 GRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTF 299
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +IS G + M+ + Y C PN +Y ++ K +K+ A+ E M+
Sbjct: 300 NMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVS 359
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
RG P + + L LC G AA+ + + + GC L +Y ++ L+ GK
Sbjct: 360 RGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKE 419
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L+L +EM G D Y + +GLC ++E A+ + G P+ ++Y+ +
Sbjct: 420 ALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILL 479
Query: 521 KLLASNKLESAYNLF 535
L + +A +LF
Sbjct: 480 GLCKRRETHNAIDLF 494
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 176/368 (47%), Gaps = 3/368 (0%)
Query: 142 SGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
+G A+V+ + + DV +Y ++++A +R + +L +M +G PD+ T
Sbjct: 172 TGNALVVLDDMLRR--GCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITY 229
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
++V++ + G+V AI+ L L G + + S N+VL LC A L M
Sbjct: 230 NVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQ 289
Query: 262 K-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
K NV+T+N++IS + G V VL +I G +P+SL+++ ++ + ++D
Sbjct: 290 KGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDR 349
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A+ + M +GC PD +YN +++ G+ D ++ + C P + +Y +I
Sbjct: 350 AMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVID 409
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
GL K+ K +ALE+ EM+ +G+ P T ++ LC A+ + K + +G +
Sbjct: 410 GLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRP 469
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+ Y +L L + +DL+ M +G + Y +I GL G ++ A ++
Sbjct: 470 NTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELL 529
Query: 501 EESLRKGF 508
E +G
Sbjct: 530 GELCSRGV 537
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 185/410 (45%), Gaps = 10/410 (2%)
Query: 85 RIDSSR--AVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNL- 141
++D++R D + P+ ++ L G+G +AL ++ L V VV L
Sbjct: 139 QLDAARRLVADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILL 198
Query: 142 ------SGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
SG + ++ A D+ +YNV+V + + D L + G
Sbjct: 199 EATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCE 258
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P+ + +IV+ A + A +++ + G + + N+++ LC+R V A +
Sbjct: 259 PNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEV 318
Query: 256 FNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
+ + K N ++YN ++ + K ++ ++ +V+ G PD ++++ L+ L R
Sbjct: 319 LDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCR 378
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G +D A+E+ +K+KGC P +YN VI G E ++ M + +P++ T
Sbjct: 379 GGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIIT 438
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y+ + SGL + ++ +A+ F ++ D GI P+T + L LC H A+ ++
Sbjct: 439 YSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMI 498
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
GC + + Y +L+ L+ G +L E+ G S G I + I
Sbjct: 499 SNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKGLINKAAI 548
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 129/293 (44%), Gaps = 18/293 (6%)
Query: 248 HVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT--F 305
H G A+S N++ + + N + G + G + E R+++ + G P +
Sbjct: 46 HAGVAAS-PNAVPHRAVSNDR-----LRGLVRRGDLEEALRLVESM--SGLEPSAAPGPC 97
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LI+ L +GR +A V C PD AYNA+++ Y G D + M
Sbjct: 98 AALIKKLCASGRTAEARRVL-----AACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPM 152
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
EP+ TY LI GL + +AL V ++ML RG VP T T LE C
Sbjct: 153 ---EPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQ 209
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
AM + + R GC + Y +++ + G+ ++ + G + Y V+
Sbjct: 210 AMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLK 269
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GLC + E+A +M E +KG+ P+ + ++ L + L +E A + +I
Sbjct: 270 GLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQI 322
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST--GTITSFLEPLCSYG 421
+S N P+ + GL++ + +AL + E M G+ PS G + ++ LC+ G
Sbjct: 51 ASPNAVPHRAVSNDRLRGLVRRGDLEEALRLVESM--SGLEPSAAPGPCAALIKKLCASG 108
Query: 422 PPHAAMMMYKKARKV--GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
+AR+V C+ + AY + ++G+ G L + + D
Sbjct: 109 -------RTAEARRVLAACEPDVMAYNAM---VAGYCVTGQLDAARRLVADMPMEPDSYT 158
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y +I GLC G+ NA++V+++ LR+G P + Y+ L + + A L +++
Sbjct: 159 YNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 218
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 163/331 (49%), Gaps = 4/331 (1%)
Query: 165 SYNVIVKAL-GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+YN ++ +L GR + D + + +PD+ + ++V+ R GQV KA++++ R
Sbjct: 217 AYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVER 276
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLG 281
+ +FG D + N+++ LC+ V + ++ G + NV+T+ VISG+ K G
Sbjct: 277 MNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 336
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ + V ++VA G P+++T++ LI G G+ G + A+EV+ M C PD ++
Sbjct: 337 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 396
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM-LD 400
++I Y G D+ ++ + M+ + +PN+ T++ +I L K + +A+ + E+ L
Sbjct: 397 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLR 456
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
I P ++ LC G A ++ K + GC+ Y +L+ +
Sbjct: 457 PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISE 516
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ +HEM E+G D I+ L G
Sbjct: 517 AIMFFHEMVEAGCSPDSITVNCFISCLLKAG 547
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 179/371 (48%), Gaps = 24/371 (6%)
Query: 178 FFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE-DFGLKFDAESL 236
F C+ LS + P + ++ R+G+ A+Q+ ++ +G DA L
Sbjct: 130 FTALHCSPLS------ITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFL 183
Query: 237 N-VVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVIS---GWSKLGQVVEM-ERVLK 291
+ +V C C L +A+ L + + YN ++S G ++ VV + ER ++
Sbjct: 184 SFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQ 243
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
+ V +SPD +F+ +I+G+ R G++ A+E+ + M E GC PDT +N ++
Sbjct: 244 DRV---YSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTN 300
Query: 352 DFDECMKYYKGMSSYN-CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
+ + + + C PN+ T+T +ISG K+ K+ DA+ V+ +M+ GI+P+T T
Sbjct: 301 EVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTY 360
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHE 467
+ G +A+ +Y++ ++ C + + L + G+ +CG L D +W +
Sbjct: 361 NVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSL---IDGYCRCGQLDDALRIWSD 417
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAV-LVMEESLRKGFCPSRLVYSKLSNKLLASN 526
M + + + +I LC + + A+ L+ E +LR P +Y+ + + L
Sbjct: 418 MAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCG 477
Query: 527 KLESAYNLFRK 537
K++ A NL RK
Sbjct: 478 KVDEA-NLIRK 487
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 151/332 (45%), Gaps = 40/332 (12%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
++ ++ RG + + + LF W I+ + DV S+NV++K + R ++ M
Sbjct: 221 LMSSLIGRGRVH-DVVALFERW-IQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMN 278
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF-DAESLNVVLWCLCQRLHV 249
+ G +PD T +I++D R +V + ++L RL+ G+ + + V+ C+ +
Sbjct: 279 EFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKL 338
Query: 250 GAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
A +++N M ++ N +TYN++I+G+ K+G + V +++ PD +TFS L
Sbjct: 339 EDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSL 398
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA----------------------------- 339
I+G R G++DDA+ ++ M + P+
Sbjct: 399 IDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPD 458
Query: 340 -------YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
YN VI G DE KGM C P+ TYT LI G ++++A+
Sbjct: 459 IAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAI 518
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
F EM++ G P + T+ F+ L G P+
Sbjct: 519 MFFHEMVEAGCSPDSITVNCFISCLLKAGMPN 550
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 178/407 (43%), Gaps = 38/407 (9%)
Query: 135 VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
V+ R +A+ LF + H + D + + +V + D +LS ++ G
Sbjct: 153 VLCRSGRQADALQLF-DQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGC 211
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGR-LEDFGLKFDAESLNVVLWCLCQRLHVGAAS 253
+ + +M S I G+V+ + + R ++D D S NVV+ +C+ V A
Sbjct: 212 RVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKAL 271
Query: 254 SLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS-PDSLTFSFLIEG 311
L M + +T+NI++ G + +V VL+ + +G P+ +TF+ +I G
Sbjct: 272 ELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISG 331
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
+AG+++DA+ V++ M G P+T YN +I+ Y VGD ++ Y+ M+ C P+
Sbjct: 332 YCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPD 391
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+ T++ LI G + ++ DAL ++ +M I P+ T + + LC A+ +
Sbjct: 392 VVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLN 451
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ L+L ++ + IY VI LC G
Sbjct: 452 E-----------------------------LNLRPDIAPQAF-----IYNPVIDVLCKCG 477
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+++ A L+ + KG P + Y+ L +++ A F ++
Sbjct: 478 KVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEM 524
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 86/172 (50%), Gaps = 2/172 (1%)
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP-PHAAMM 428
P+ + ++I L +S + ADAL++F++M SFL C+ A+
Sbjct: 142 PSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASAT 201
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE-MQESGYPSDGEIYEYVIAGL 487
+ KA + GC++ AY L+ L G G+ ++ L+ +Q+ Y D + VI G+
Sbjct: 202 LLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGV 261
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
C +GQ++ A+ ++E G P + ++ L + L +N++ + + R+++
Sbjct: 262 CRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQ 313
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 192/417 (46%), Gaps = 36/417 (8%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V +V + N+++ AL + + + + LSDM ++GV PD+ T + +++++ R G + +A
Sbjct: 250 VQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAF 309
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+++ + GLK + N ++ LC+ A + + M K + + TYNI++
Sbjct: 310 ELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVEC 369
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ +++ ER+ E+ ++G PD ++FS LI L + G +D A++ F MK G PD
Sbjct: 370 CRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDN 429
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +I + G E +K M C ++ TY +++GL K + +++A E+F E
Sbjct: 430 VIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTE 489
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL-------- 449
M +RG+ P T T+ + G + A+ +++ + K + Y L+
Sbjct: 490 MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 549
Query: 450 -------------RRL-----------SGFGKCGMLLD---LWHEMQESGYPSDGEIYEY 482
RR+ +G+ G + + LW EM E G+ +
Sbjct: 550 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 609
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ G C G A + L KG P + Y+ L N + ++ A+ L K++
Sbjct: 610 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKME 666
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 181/387 (46%), Gaps = 1/387 (0%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+K + + + N ++ L + + D + ++ + GV ++ TL+I++++ +
Sbjct: 209 VLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQ 268
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN-VMTYN 271
++ L +E+ G+ D + N ++ C++ + A L +SM GK L V TYN
Sbjct: 269 KIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYN 328
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I+G K G+ + + VL E++ G SPD+ T++ L+ R + DA +FD M +
Sbjct: 329 AIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQ 388
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G PD +++A+I G D+ +KY++ M + P+ YT LI G ++ +++A
Sbjct: 389 GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEA 448
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
L+V +EML++G V T + L LC A ++ + + G + L+
Sbjct: 449 LKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLING 508
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
S G + L+ M + D Y +I G C ++E + + + + P+
Sbjct: 509 YSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 568
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y L N + A+ L+ ++
Sbjct: 569 HISYGILINGYCNMGCVSEAFRLWDEM 595
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 171/376 (45%), Gaps = 3/376 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D +YN+++ R + +M +GV PDL + S ++ + G + +A+
Sbjct: 355 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 414
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
+ +++ GL D +++ C+ + A + + M +G VL +V+TYN +++G
Sbjct: 415 KYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVL-DVVTYNTILNG 473
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K + E + + E+ G PD TF+ LI G + G ++ A+ +F+ M ++ PD
Sbjct: 474 LCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPD 533
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN +I + + ++ + + M S PN +Y LI+G V++A +++
Sbjct: 534 VVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWD 593
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
EM+++G + T + ++ C G A G Y L+
Sbjct: 594 EMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 653
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
L ++M+ SG D Y ++ G G+++ A L+M + + +G P R Y+
Sbjct: 654 NMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYT 713
Query: 517 KLSNKLLASNKLESAY 532
L N + N L+ A+
Sbjct: 714 SLINGHVTQNNLKEAF 729
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 158/356 (44%), Gaps = 7/356 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D+ S++ ++ L + D DM G+ PD +I++ F R G + +A+
Sbjct: 390 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 449
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
++ + + G D + N +L LC+ + A LF M + +F + T+ +I+G+
Sbjct: 450 KVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGY 509
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
SK G + + + + ++ PD +T++ LI+G + ++ E+++ M + P+
Sbjct: 510 SKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNH 569
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+Y +I+ Y ++G E + + M E + T ++ G ++ A E
Sbjct: 570 ISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSN 629
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
ML +GIVP T + + A + K G + Y ++ L+GF +
Sbjct: 630 MLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVI---LNGFSR 686
Query: 458 CGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
G + + + +M E G D Y +I G L+ A V +E L++GF P
Sbjct: 687 QGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 742
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 185/404 (45%), Gaps = 14/404 (3%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
E++VL + +P V ++++V+ + + C + +G+ + +
Sbjct: 171 ESLVLTYGNCGSNPLV------FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNS 224
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++ ++ G V A ++ + G++ + +LN+++ LC+ + S + M+ K
Sbjct: 225 LLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKG 284
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+F +V+TYN +I+ + + G + E ++ + +G P T++ +I GL + G+ A
Sbjct: 285 VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAK 344
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
V D M + G PDT YN ++ + + + + M S P++ +++ LI L
Sbjct: 345 GVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 404
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K+ + AL+ F +M + G+ P T + C G A+ + + + GC L +
Sbjct: 405 SKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDV 464
Query: 443 TAYKLLLRRLSGFGKCGMLL---DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
Y + L+G K ML +L+ EM E G D + +I G G + AV +
Sbjct: 465 VTYNTI---LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTL 521
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
E +++ P + Y+ L + +++E L+ + I+R+
Sbjct: 522 FEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM-ISRR 564
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 162/384 (42%), Gaps = 21/384 (5%)
Query: 157 PNVAKDVKSYNVIVKALGR-RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PN ++S++ ++ L R R+ D +L + K GV+ R V
Sbjct: 126 PNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVS--------------RVEIVE 171
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVI 274
+ G L FD L V + ++L G + F +K K L ++ N ++
Sbjct: 172 SLVLTYGNCGSNPLVFD---LLVRTYVQARKLREGCEA--FRVLKSKGLCVSINACNSLL 226
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G K+G V + +E+V G + T + +I L + +I++ M+EKG
Sbjct: 227 GGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVF 286
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN +I+ Y G +E + MS +P + TY +I+GL K+ K A V
Sbjct: 287 PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 346
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+EML G+ P T T L C A ++ + G L ++ L+ LS
Sbjct: 347 LDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSK 406
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G L + +M+ +G D IY +I G C G + A+ V +E L +G +
Sbjct: 407 NGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVT 466
Query: 515 YSKLSNKLLASNKLESAYNLFRKI 538
Y+ + N L L A LF ++
Sbjct: 467 YNTILNGLCKEKMLSEADELFTEM 490
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 82/150 (54%), Gaps = 1/150 (0%)
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
+M ++G + T + ++ + RAG KA + L + G+ D + N ++ +
Sbjct: 594 EMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 653
Query: 248 HVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
++ A +L N M+ +L +V+TYN++++G+S+ G++ E E ++ +++ G +PD T++
Sbjct: 654 NMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYT 713
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
LI G + +A V D M ++G PD
Sbjct: 714 SLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 181/396 (45%), Gaps = 20/396 (5%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A + +YNV++ L ++ + +M G+ P+++ ++++ S AG++ +A+Q
Sbjct: 204 APNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQ 263
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM----KGKVLFNVMTYNIVIS 275
+LG ++D G D + N L LC+ VG + F + G + Y+ +I
Sbjct: 264 LLGSMKDKGCLPDEVTYNAFLSGLCK---VGRVNEAFQRLVMLQDGGFALGLKGYSCLID 320
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G + + E K ++ SPD + ++ +I G AGRI+DA+ D MK+KG P
Sbjct: 321 GLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVP 380
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
DT YN V+ GD + M N + T T +I GL K V +A+++F
Sbjct: 381 DTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIF 440
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR-----KVGCKLSLTAYKL--- 447
+EM + G P+ T + ++ G A M++ K + +L+L A ++
Sbjct: 441 DEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDS 500
Query: 448 -----LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
L+ + G+ L + +SG D Y +I GLC L+ AV + +E
Sbjct: 501 ESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKE 560
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
KG P + Y L + LL +++ A LF+ I
Sbjct: 561 LQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNI 596
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 172/392 (43%), Gaps = 20/392 (5%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN I+KAL + + M G P+ T +++MD + G A++M +
Sbjct: 175 YNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEML 234
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
D G+ + + V+L LC + A L SMK K L + +TYN +SG K+G+V
Sbjct: 235 DRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVN 294
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E + L + GF+ +S LI+GL +A R D+ + TM E+ PD Y +I
Sbjct: 295 EAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMI 354
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
G ++ + + M P+ Y ++ L + A + EML +V
Sbjct: 355 RGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLV 414
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD- 463
+ T T + LC G AM ++ + + GC ++ Y L+ GF + G L +
Sbjct: 415 LDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALI---DGFYREGRLEEA 471
Query: 464 --LWHEMQESGYPS-------------DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L+H+M+ PS D E ++ +C GQ+ A ++ + G
Sbjct: 472 RMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGV 531
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
P + Y+ L N L + L+ A LF+++++
Sbjct: 532 VPDVVTYNTLINGLCKARNLDGAVRLFKELQL 563
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 160/360 (44%), Gaps = 1/360 (0%)
Query: 182 MCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLW 241
M + L+D G+ + ++ + AG+ A+Q R+++F + A N +L
Sbjct: 121 MFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILK 180
Query: 242 CLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
L + A +L+N M N TYN+++ G K G + ++ E++ G P
Sbjct: 181 ALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMP 240
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
+ ++ L+ L AG+ID+A+++ +MK+KGC PD YNA +S VG +E +
Sbjct: 241 NVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRL 300
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
+ + Y+ LI GL ++R+ + ++ ML+R I P T +
Sbjct: 301 VMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEA 360
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
G A+ +K G Y +L+ L G L EM ++ D
Sbjct: 361 GRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQ 420
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+I GLC G ++ A+ + +E G P+ + Y+ L + +LE A LF K+++
Sbjct: 421 TIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM 480
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 172/414 (41%), Gaps = 31/414 (7%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
FL +K KG + D V L G + L E + N+ D +
Sbjct: 369 FLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEML---------QNNLVLDSTT 419
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
+++ L +R D + +M + G +P + T + ++D F R G++ +A + ++E
Sbjct: 420 QTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKME 479
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE 285
+ SL + RL +GA N ++ + +++ SG QV++
Sbjct: 480 ----MGNNPSLFL-------RLTLGA-----NQVRDSESLRKLVHDMCQSG-----QVLK 518
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
++L+ I+ G PD +T++ LI GL +A +D A+ +F ++ KG PD Y +I
Sbjct: 519 AYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLID 578
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI-V 404
+ ++ M ++ + P++ Y ++ L + +K++ A+ ++ + L +
Sbjct: 579 GLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNF 638
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P + + G + K + +S Y + L L + L +
Sbjct: 639 PVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRI 698
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+H +QE G +I LC L AV +M +L K S+ V ++L
Sbjct: 699 FHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRL 752
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 168/382 (43%), Gaps = 36/382 (9%)
Query: 177 KFFDFMCNVL---------SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDF 227
K F+C + +M GV PD+ T +I++DSF + G + +A +E
Sbjct: 460 KVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESV 519
Query: 228 GLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEM 286
G + +L + V AS +F+ M N +TY+ ++ G K G+ +
Sbjct: 520 GCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKA 579
Query: 287 ERVLKEIVA----------------EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
V +++ + +P+ +T+ LI+GL +A ++ DA E+ D M
Sbjct: 580 CEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSS 639
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
GC P+ Y+A+I + VG D + + MS P + TYT LI + K R++
Sbjct: 640 NGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDL 699
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A++V +ML+ P+ T T+ ++ LC G A+ + K GC ++ Y L+
Sbjct: 700 AIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLID 759
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR----- 505
L GK M L L+ +M G + Y +I C G L+ A ++ E +
Sbjct: 760 GLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPK 819
Query: 506 --KGFCPSRLVYSKLSNKLLAS 525
+G+C V S K +AS
Sbjct: 820 YVQGYCS---VVQGFSKKFIAS 838
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 205/468 (43%), Gaps = 39/468 (8%)
Query: 104 GVFLQKLKGKGVIEDALWNVN-VDLSLDVVGKVVNRGNLSGEAMVLFFNWAI------KH 156
G F Q L +G DAL + D LD V + +SG F+ AI +
Sbjct: 246 GCFAQALCKEGRWSDALVMIEREDFKLDTV---LCTQMISGLMEASLFDEAISFLHRMRC 302
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
+ +V +Y ++ ++K + ++S M EG NP+ + ++ S+ A
Sbjct: 303 NSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPY 362
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA------ASSLFNSMKGK--VLFNVM 268
A ++L R+ G N+ + +C + + A ++ M VL V
Sbjct: 363 AYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVN 422
Query: 269 TYNI--VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
T N + G K + + ++K ++ +GF PD+ T+S +I L A +++ A +F
Sbjct: 423 TANFARCLCGMGKFDKAFQ---IIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQ 479
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
MK G PD Y +I ++ VG ++ ++ M S C P++ TYT L+ LK++
Sbjct: 480 EMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTK 539
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK----ARKVGCKL-- 440
+V A ++F M+D G P+T T ++ ++ LC G A +Y K + VG
Sbjct: 540 QVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYF 599
Query: 441 ----------SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
++ Y L+ L K +L M +G + IY+ +I G C +
Sbjct: 600 EGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKV 659
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G+L+NA V + G+ P+ Y+ L + + +L+ A + ++
Sbjct: 660 GKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQM 707
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 131/512 (25%), Positives = 212/512 (41%), Gaps = 66/512 (12%)
Query: 79 RSNSVKRIDSSRAVDEFLLPEERLRGVFL--QKLKGKGVIEDA-LWNVNVDLSLDVVGKV 135
R V + V FL ++ FL Q++K GVI D + + +D S VG +
Sbjct: 448 RKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILID-SFCKVGLI 506
Query: 136 VNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
E +F+ ++ + V +Y ++ A + K ++ M G
Sbjct: 507 --------EQARSWFD-EMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCA 557
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQ----MLGRLEDFGLKF-------DAESLNVVLWC-- 242
P+ T S ++D +AG+ KA + M+G ++ G F D+ + NVV +
Sbjct: 558 PNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGAL 617
Query: 243 ---LCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
LC+ V A L + M N + Y+ +I G+ K+G++ + V + G+
Sbjct: 618 IDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGY 677
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
P T++ LI+ + + R+D AI+V M E C P+ Y A+I +G+ + +K
Sbjct: 678 LPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALK 737
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
M C PN+ TYT LI GL KS KV +L++F +M+ +G P+ T + C
Sbjct: 738 LLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCC 797
Query: 419 SYG---PPHAAMMMYKK-----------------ARKVGCKLSL-------------TAY 445
+ G H+ + K+ ++K L L Y
Sbjct: 798 AAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVY 857
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQE---SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
LL+ S G+ L+L EM E S + + Y +I LC QLE A + E
Sbjct: 858 GLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSE 917
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
RKG P + L L+ NK A L
Sbjct: 918 ITRKGVVPELSAFICLIKGLIKVNKWNEALQL 949
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 168/378 (44%), Gaps = 17/378 (4%)
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNV 238
FD ++ M ++G PD T S V+ A +V KA + ++ G+ D + +
Sbjct: 436 FDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTI 495
Query: 239 VLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
++ C+ + A S F+ M+ +V+TY ++ + K QV + + +V G
Sbjct: 496 LIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAG 555
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM----------------KEKGCGPDTNAYN 341
+P+++T+S L++GL +AG A EV+ M P+ Y
Sbjct: 556 CAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYG 615
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A+I + + MSS CEPN Y LI G K K+ +A EVF M
Sbjct: 616 ALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKC 675
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G +P+ T TS ++ + A+ + + + C ++ Y ++ L G+C
Sbjct: 676 GYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKA 735
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L L M++ G + Y +I GL G+++ ++ + + + +G P+ + Y L N
Sbjct: 736 LKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINH 795
Query: 522 LLASNKLESAYNLFRKIK 539
A+ L+ A++L ++K
Sbjct: 796 CCAAGLLDEAHSLLSEMK 813
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 168/420 (40%), Gaps = 51/420 (12%)
Query: 130 DVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDM 189
D V V R + E V FF WA + + YN + + L FD +
Sbjct: 104 DAVVVAVLRSVRTPELCVRFFLWAERQVGYSHTGACYNALAEVL----HFDDRARTTERL 159
Query: 190 AKEGVNPDLETL----SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
+E D E L ++++ R G KA++ LGRL+DFG +
Sbjct: 160 LREIGEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLKDFGYR--------------- 204
Query: 246 RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
GA TYN ++ + GQ+ RV KE+ GF D T
Sbjct: 205 --PSGA-----------------TYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTV 245
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ L + GR DA+ + + K DT +IS + FDE + + M
Sbjct: 246 GCFAQALCKEGRWSDALVMIEREDFK---LDTVLCTQMISGLMEASLFDEAISFLHRMRC 302
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
+C PN+ TY L++G LK +++ + M++ G P+ S + C+
Sbjct: 303 NSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPY 362
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM--LLDLWHEMQESGYPSDGEIYEYV 483
A + + GC Y + + + + LL L ++ E S + +
Sbjct: 363 AYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVN 422
Query: 484 IAG----LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
A LC +G+ + A +++ +RKGF P YSK+ L + K+E A+ LF+++K
Sbjct: 423 TANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMK 482
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 113/250 (45%), Gaps = 6/250 (2%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ +V +Y ++ L R +LS M K G NP++ T + ++D ++G+V +
Sbjct: 711 SCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMS 770
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN-VMTYNIVISG 276
+Q+ ++ G + + V++ C + A SL + MK V Y V+ G
Sbjct: 771 LQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQG 830
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG-- 334
+SK + + +L+E+ + G + + LI+ +AGR++ A+E+ M E
Sbjct: 831 FSK--KFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLN 888
Query: 335 -PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
+ Y ++I ++ + Y ++ P + + LI GL+K K +AL+
Sbjct: 889 ITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQ 948
Query: 394 VFEEMLDRGI 403
+ M D G+
Sbjct: 949 LCYSMCDEGV 958
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 151/300 (50%), Gaps = 3/300 (1%)
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
+PD+ + ++V+ + G V KA++++ R+++FG D + N+++ LC+ V
Sbjct: 231 SPDVWSFNVVIKGVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGRE 290
Query: 255 LFNSMK--GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
+ ++ G + NV+TY VISG+ K G++ + V ++VA G SP+ +T++ LI G
Sbjct: 291 VLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGY 350
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
G+AG + A+ V+ M + C PD ++++I Y G D+ MK + M+ Y+ +PN
Sbjct: 351 GKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNA 410
Query: 373 DTYTRLISGLLKSRKVADALEVFEEM-LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
T+ +I K + +AL ++M + I P ++ LC G A M+
Sbjct: 411 HTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILI 470
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ + GC+ Y +L+ G+ + +H+M E+G D + I+ L G
Sbjct: 471 EMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSG 530
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 167/366 (45%), Gaps = 10/366 (2%)
Query: 177 KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESL 236
+ FD M + + G P+ LS + S AG + A +L + FG +A +
Sbjct: 148 QLFDQMTD------QSGYFPNARFLSFLSGSCAAAGLLDAAAALLSKASQFGCSIEAYAY 201
Query: 237 NVVLWCLCQRLHVGAASSLFNS-MKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIV 294
N ++ V A +LF ++G V +V ++N+VI G K+G V + +++ +
Sbjct: 202 NKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGDVQKALELVERMD 261
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG-CGPDTNAYNAVISNYISVGDF 353
G SPD++T + L+ GL RA + EV ++ G C P+ Y +VIS Y G
Sbjct: 262 EFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGRM 321
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
++ M Y M + PN+ TY LI+G K+ + A+ V+++M+ R +P T +S
Sbjct: 322 EDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSL 381
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ-ESG 472
++ C G AM ++ + + + + + +++ + G L +M +
Sbjct: 382 IDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTD 441
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
IY VI LC G+++ A +++ E KG P + Y+ L ++ A
Sbjct: 442 IAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAV 501
Query: 533 NLFRKI 538
F K+
Sbjct: 502 TFFHKM 507
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 144/318 (45%), Gaps = 39/318 (12%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF W I+ + DV S+NV++K + + ++ M + G +PD T +I
Sbjct: 216 DAVALFEGW-IQGGVYSPDVWSFNVVIKGVCKVGDVQKALELVERMDEFGCSPDTVTHNI 274
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKF-DAESLNVVLWCLCQRLHVGAASSLFNSMKG- 261
+++ RA +V K ++L RL+ G+ + + V+ C+ + A +++N M
Sbjct: 275 LVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAV 334
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
NV+TYN++I+G+ K G + V ++++ PD +TFS LI+G R G++DDA
Sbjct: 335 GTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDA 394
Query: 322 IEVFDTMKEKGCGPDTNA------------------------------------YNAVIS 345
++++ M + P+ + YN VI
Sbjct: 395 MKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYNPVID 454
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
G DE M C P+ TYT LI G ++A+A+ F +M++ G P
Sbjct: 455 VLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSP 514
Query: 406 STGTITSFLEPLCSYGPP 423
+ + SF+ L G P
Sbjct: 515 DSIVVNSFISCLLKSGMP 532
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 2/246 (0%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC-GPDTNAYNAVISNYISVGDFDE 355
G S ++ ++ L++ GR+ DA+ +F+ + G PD ++N VI VGD +
Sbjct: 193 GCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGDVQK 252
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI-VPSTGTITSFL 414
++ + M + C P+ T+ L++GL ++++V+ EV + G+ +P+ T TS +
Sbjct: 253 ALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVI 312
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
C G AM +Y VG ++ Y +L+ G G + ++ +M
Sbjct: 313 SGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCL 372
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
D + +I G C GQL++A+ + E + P+ + + + N+ A +
Sbjct: 373 PDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHF 432
Query: 535 FRKIKI 540
+K+ +
Sbjct: 433 LKKMNM 438
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 2/173 (1%)
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC-SYGPPHAAM 427
P+ +Y +IS + +S + DAL++F++M D+ SFL C + G AA
Sbjct: 124 PPSAHSYRYVISLMCQSGRHTDALQLFDQMTDQSGYFPNARFLSFLSGSCAAAGLLDAAA 183
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG-YPSDGEIYEYVIAG 486
+ KA + GC + AY L+ G G+ + L+ + G Y D + VI G
Sbjct: 184 ALLSKASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKG 243
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+C +G ++ A+ ++E G P + ++ L N L + ++ + R+++
Sbjct: 244 VCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQ 296
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 183/366 (50%), Gaps = 1/366 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ + + D +YN+++ +L R D VL+ + + P + T +I++++ + G
Sbjct: 184 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGG 243
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
V +A++++ + GLK D + N ++ +C+ V A + +++ K +V++YNI
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
++ G+ E E+++ ++ +E P+ +T+S LI L R G+I++A+ + MKEKG
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD +Y+ +I+ + G D +++ + M S C P++ Y +++ L K+ K AL
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
E+F ++ + G P++ + + L S G A+ M + G Y ++ L
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G +L +M+ + Y V+ G C ++E+A+ V+E + G P+
Sbjct: 484 CREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNE 543
Query: 513 LVYSKL 518
Y+ L
Sbjct: 544 TTYTVL 549
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 164/345 (47%), Gaps = 1/345 (0%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
PD+ + +++ F + ++ A ++L R+ D + N+++ LC R + A +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 256 FNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
N + V+TY I+I G V E +++ E+++ G PD T++ +I G+ +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G +D A E+ ++ KGC PD +YN ++ ++ G ++E K M S C+PN+ T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y+ LI+ L + K+ +A+ + + M ++G+ P + + C G A+ +
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
GC + Y +L L GK L+++ ++ E G + Y + + L + G
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
A+ ++ E + G P + Y+ + + L ++ A+ L ++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR 500
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 138/308 (44%), Gaps = 36/308 (11%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V+ +I G+ L + + RV+ EI+ + PD ++ LI G + RIDDA V
Sbjct: 123 DVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALINGFCKMNRIDDATRVL 181
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M+ K PDT YN +I + S G D +K + S NC+P + TYT LI +
Sbjct: 182 DRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLE 241
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
V +AL++ +EML RG+ P T + + +C G A M + GC+ + +Y
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISY 301
Query: 446 KLLLRRLSGFG---------------KC-----------------GML---LDLWHEMQE 470
+LLR L G KC G + ++L M+E
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G D Y+ +IA C G+L+ A+ +E + G P + Y+ + L + K +
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 421
Query: 531 AYNLFRKI 538
A +F K+
Sbjct: 422 ALEIFGKL 429
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 168/378 (44%), Gaps = 1/378 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN ++ + D VL M + +PD T +I++ S G++ A+++L
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
+L + + +++ V A L + M + L ++ TYN +I G K
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G V +++ + +G PD ++++ L+ L G+ ++ ++ M + C P+ Y
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +I+ G +E M K M P+ +Y LI+ + ++ A+E E M+
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G +P + L LC G A+ ++ K +VGC + ++Y + L G
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L + EM +G D Y +I+ LC G ++ A ++ + F PS + Y+ +
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Query: 521 KLLASNKLESAYNLFRKI 538
++++E A N+ +
Sbjct: 517 GFCKAHRIEDAINVLESM 534
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 152/320 (47%), Gaps = 21/320 (6%)
Query: 115 VIEDALWNVNVDLSLDVVGKVVNRG-------------NLSGEAMV-----LFFNWAIKH 156
+IE + VD +L ++ ++++RG + E MV + N +K
Sbjct: 234 LIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK- 292
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
DV SYN++++AL + ++ +++ M E +P++ T SI++ + R G++ +
Sbjct: 293 -GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 351
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVIS 275
A+ +L +++ GL DA S + ++ C+ + A +M L +++ YN V++
Sbjct: 352 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 411
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
K G+ + + ++ G SP+S +++ + L +G A+ + M G P
Sbjct: 412 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D YN++IS G DE + M S P++ TY ++ G K+ ++ DA+ V
Sbjct: 472 DEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVL 531
Query: 396 EEMLDRGIVPSTGTITSFLE 415
E M+ G P+ T T +E
Sbjct: 532 ESMVGNGCRPNETTYTVLIE 551
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 120/246 (48%), Gaps = 9/246 (3%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV +Y++++ L R + N+L M ++G+ PD + ++ +F R G++
Sbjct: 331 PNVV----TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--NVMTYNIVI 274
AI+ L + G D + N VL LC+ A +F + G+V N +YN +
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL-GEVGCSPNSSSYNTMF 445
Query: 275 SG-WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
S WS ++ + +L E+++ G PD +T++ +I L R G +D+A E+ M+
Sbjct: 446 SALWSSGDKIRALHMIL-EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF 504
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
P YN V+ + ++ + + M C PN TYT LI G+ + A+A+E
Sbjct: 505 HPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAME 564
Query: 394 VFEEML 399
+ +++
Sbjct: 565 LANDLV 570
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 1/225 (0%)
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
R+G +++ + +TM KG PD +I + ++ + + ++ + + + +P++
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
Y LI+G K ++ DA V + M + P T T + LCS G A+ + +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
C+ ++ Y +L+ G L L EM G D Y +I G+C G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ A ++ KG P + Y+ L LL K E L K+
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 190/386 (49%), Gaps = 1/386 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ ++ DV +YN ++ G+ + + ++ ++M G PD+ T + +++ + + +
Sbjct: 256 MREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEK 315
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR-LHVGAASSLFNSMKGKVLFNVMTYNI 272
+ +A + +++ GLK + + + ++ C+ + GA L + + +L N TY
Sbjct: 316 MPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTS 375
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I K G + E ++L +++ G + +T++ L++GL +AGR+ +A EVF +M + G
Sbjct: 376 LIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 435
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ Y A++ YI ++ MK K M+ N +P++ Y +I G RK+ +
Sbjct: 436 ISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETK 495
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+ EEM RGI + T+ ++ G A+ +++ + VG + ++ Y +L+ L
Sbjct: 496 LILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGL 555
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G + +D + M G + +Y +I GLC +E+A + +E +G P
Sbjct: 556 CEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDI 615
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKI 538
++ L + L L+ A L ++
Sbjct: 616 TAFTALIDGNLKHGNLQEALVLISRM 641
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 181/414 (43%), Gaps = 24/414 (5%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFD-------------------FMCNVLSDM 189
FF WA +SY +IV + R + + +CN+ DM
Sbjct: 90 FFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIF-DM 148
Query: 190 AKEGVNPDLE---TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
N + ++ F+ G + +A + R+ +F A S N +L L +
Sbjct: 149 LWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKS 208
Query: 247 LHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
+ FN M G + +V TYN++I K G + R+ ++ G SPD +T+
Sbjct: 209 GNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTY 268
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LI+G G+ G +++ +F+ MK+ GC PD YN +I+ Y +Y+ M +
Sbjct: 269 NSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKN 328
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
+PN+ TY+ LI K + A+++ +M G++P+ T TS ++ C G
Sbjct: 329 NGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTE 388
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A + + G KL++ Y LL L G+ +++ M + G + ++Y ++
Sbjct: 389 AWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVH 448
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G ++E+A+ ++++ P ++Y + + KLE + ++K
Sbjct: 449 GYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMK 502
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/471 (23%), Positives = 202/471 (42%), Gaps = 46/471 (9%)
Query: 100 ERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNV 159
E R +F+Q ++ G+ D V + +D GKV G+L E + FN +K
Sbjct: 247 ENSRRLFVQ-MREMGLSPDV---VTYNSLIDGYGKV---GSL--EEVASLFN-EMKDVGC 296
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
D+ +YN ++ + + S+M G+ P++ T S ++D+F + G + AI+
Sbjct: 297 VPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIK 356
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWS 278
+L + GL + + ++ C+ ++ A L N M + V N++TY ++ G
Sbjct: 357 LLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLC 416
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G+++E E V + ++ +G SP+ ++ L+ G +A R++DA+++ M E PD
Sbjct: 417 KAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLI 476
Query: 339 AY------------------------------NAVISN-----YISVGDFDECMKYYKGM 363
Y N VIS Y G + + +++ M
Sbjct: 477 LYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEM 536
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
E + TY LI GL ++ V A++ F ML G+ P+ TS ++ LC
Sbjct: 537 QDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCI 596
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
+A ++ + + G +TA+ L+ G L L M E D +Y +
Sbjct: 597 ESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSL 656
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
++G G+L A E + KG P ++ L + +L+ A L
Sbjct: 657 VSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIEL 707
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 107/242 (44%), Gaps = 1/242 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N+ D+ Y I+ ++ + +L +M G++ + + ++D++ +AG+ A
Sbjct: 470 NIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDA 529
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISG 276
+ ++D G++ + V++ LC+ V A F M L NV Y +I G
Sbjct: 530 LNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDG 589
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ +++ E+ G +PD F+ LI+G + G + +A+ + M E D
Sbjct: 590 LCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFD 649
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+ Y +++S + G+ + K++ M P L+ K ++ +A+E+
Sbjct: 650 LHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKN 709
Query: 397 EM 398
EM
Sbjct: 710 EM 711
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 182/390 (46%), Gaps = 16/390 (4%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG-VNPD---LETLSIVMDSFIRAGQ 213
+ A DV +YN ++ + D ++ + +EG P+ +TL I + RA
Sbjct: 6 DCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATD 65
Query: 214 VYKAIQ-MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV-LFNVMTYN 271
Q MLG GL+ D N ++ C C+ + A L + M + +V TY+
Sbjct: 66 ALAVFQEMLGA----GLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYS 121
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
++ K G+ + V + G PD++ ++ LI LG+ G++D+A+E+ + M K
Sbjct: 122 YLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRK 181
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G PD YN VI S G +++ ++ M P++ TY L++GL K R+ +A
Sbjct: 182 GIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEA 241
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
++F+EM +P T + ++ L G A+ + K+G + Y L
Sbjct: 242 CDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNAL--- 298
Query: 452 LSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+SGF + G + +L+ +M E D Y ++ G G A+ +++E +R+G
Sbjct: 299 ISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGH 358
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ Y+ L L + ++E AY LF+++
Sbjct: 359 TPALATYNVLIRSLSMAGQVEDAYTLFKEM 388
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 116/240 (48%), Gaps = 12/240 (5%)
Query: 106 FLQKLKGKGVIEDA-LWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
L+ + KG++ D +N+ +D+ L G+ E FF +K + DV
Sbjct: 174 LLEDMNRKGIMPDCRTYNIVIDV-LSSCGRY--------EKAYSFFGM-MKRRKHSPDVV 223
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ L + + D C++ +M PDL T ++D+ +AG++ A++ RL
Sbjct: 224 TYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARL 283
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
G ++ N ++ C+ V LF M F + +TY I++ G+S+ G
Sbjct: 284 VKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHT 343
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+L+E+V EG +P T++ LI L AG+++DA +F M KG PD Y+A+
Sbjct: 344 SMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 1/208 (0%)
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY-NCEPNMDTYTRLISGLLKSRKVADA 391
C PD AYN +I+ Y GD D + ++ + +C+PN ++ L+ L K + DA
Sbjct: 7 CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDA 66
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
L VF+EML G+ + + C G A + L + Y L+
Sbjct: 67 LAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDA 126
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L G+ L+++ MQ++G D +Y +I+ L G+++ A+ ++E+ RKG P
Sbjct: 127 LGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPD 186
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y+ + + L + + E AY+ F +K
Sbjct: 187 CRTYNIVIDVLSSCGRYEKAYSFFGMMK 214
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 188/418 (44%), Gaps = 21/418 (5%)
Query: 121 WNVNVDLSLDVV--GKVVNRGNLSG--EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRR 176
W + D DV ++NR G E V F + A K + ++ SY +++A +
Sbjct: 335 WIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNL-SYAPLIQAYCKS 393
Query: 177 KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESL 236
K +D +L MA+ G PD+ T I++ + +G + A+ M +L D G+ DA
Sbjct: 394 KEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIY 453
Query: 237 NVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
N+++ LC+ A LF+ M + +L + Y +I G+ + G E +V V
Sbjct: 454 NMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVE 513
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+G D + + +I+G R+G +D+A+ + M E+ PD Y+ +I Y+ D
Sbjct: 514 KGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMAT 573
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+K ++ M C+PN+ TYT LI+G A E F+EM R +VP+ T T+ +
Sbjct: 574 AIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIR 633
Query: 416 PLCSYGPP-HAAMMMYKKARKVGCKLSLTAYKLLLRRL--------------SGFGKCGM 460
L A+ ++ C + + LL+ S G+ +
Sbjct: 634 SLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSL 693
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+ +H M+ G+ Y + LC G ++ A + ++ ++KGF P + ++ +
Sbjct: 694 FSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAI 751
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 164/379 (43%), Gaps = 7/379 (1%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN I+ + + V ++ +G P LET +++ F + G + ++L ++
Sbjct: 243 YNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVK 302
Query: 226 DFGLKFDAESLNVVLWCLCQRLH-VGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVV 284
+ GL+ LN ++ + + V A S+ + +V TYNI+I+ K G+
Sbjct: 303 ERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKE 362
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
L E +G P++L+++ LI+ ++ D A ++ M E+GC PD Y +I
Sbjct: 363 VAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILI 422
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ G D+ + + P+ Y L+SGL K+ + A +F EMLDR I+
Sbjct: 423 HGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNIL 482
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML--- 461
P + ++ G A ++ + + G K+ + + +++ GF + GML
Sbjct: 483 PDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIK---GFCRSGMLDEA 539
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L + M E D Y +I G + A+ + + P+ + Y+ L N
Sbjct: 540 LACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLING 599
Query: 522 LLASNKLESAYNLFRKIKI 540
+ A F+++++
Sbjct: 600 FCCQGDFKMAEETFKEMQL 618
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 162/379 (42%), Gaps = 51/379 (13%)
Query: 170 VKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGL 229
+K L R + F+ + +VL ++ E V E LS V+ ++ +G + KA+++ + +
Sbjct: 106 LKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVE--- 162
Query: 230 KFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERV 289
L++S+ +V+ N ++S K ++ + +V
Sbjct: 163 -------------------------LYDSVP-----DVIACNSLLSLLVKSRRLGDARKV 192
Query: 290 LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYIS 349
E+ G S D+ + L++G+ G+++ ++ + KGC P+ YN +I Y
Sbjct: 193 YDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCK 252
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
+GD + +K + P ++T+ +I+G K + + E+ +RG+ S
Sbjct: 253 LGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWF 312
Query: 410 ITSFLEPLCSYGPPHAAMMMYK--KARKVG------CKLSLTAYKLLLRRLSGFGKCGML 461
+ + ++ +G YK A +G CK + Y +L+ RL GK +
Sbjct: 313 LNNIIDAKYRHG--------YKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVA 364
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+ E + G + Y +I C + + A ++ + +G P + Y L +
Sbjct: 365 VGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHG 424
Query: 522 LLASNKLESAYNLFRKIKI 540
L+ S ++ A N+ K+K+
Sbjct: 425 LVVSGHMDDAVNM--KVKL 441
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 163/347 (46%), Gaps = 17/347 (4%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +Y ++ L + K D + +M K GVNPD+ T +I++DSF +AG + +A
Sbjct: 451 DASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWF 510
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
+ G + + +L + + A+ +F+ M G + N +TY+ +I G K
Sbjct: 511 DEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKA 570
Query: 281 GQVVEMERVLKEIVA-----------EG-----FSPDSLTFSFLIEGLGRAGRIDDAIEV 324
G++ + V +++ EG SP+ +T+ L+ GL +A ++ DA ++
Sbjct: 571 GEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDL 630
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
D M GC P+ Y+A++ + VG+ D + + M+ P++ TYT LI + K
Sbjct: 631 LDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFK 690
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
++ A++V +ML P+ T T+ ++ LC G A+ + K GC ++
Sbjct: 691 DGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVT 750
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
Y L+ L GK L+L+ +M+ G + Y +I C G
Sbjct: 751 YTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAG 797
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 171/357 (47%), Gaps = 20/357 (5%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
++ +M ++G PD T + V+ +A +V KA + ++ G+ D + +++
Sbjct: 438 QIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSF 497
Query: 244 CQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C+ + A S F+ M+ NV+TY ++ + K Q+ + + +V + P++
Sbjct: 498 CKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNA 557
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+T+S LI+GL +AG I A EV+ + I D E Y++G
Sbjct: 558 ITYSALIDGLCKAGEIQKACEVY-------------------AKLIGTSDNIESDFYFEG 598
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
+ PN+ TY L++GL K++KV+DA ++ + ML G P+ + ++ C G
Sbjct: 599 KDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGE 658
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
+A ++ + K G S+ Y L+ R+ G+ + + + +M + + Y
Sbjct: 659 IDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTA 718
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ GLC G+ E A+ ++ +KG P+ + Y+ L + L + K+++ LF ++K
Sbjct: 719 MVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMK 775
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 201/466 (43%), Gaps = 35/466 (7%)
Query: 104 GVFLQKLKGKGVIEDALWNVN-VDLSLDVVGKVVNRGNLSGEAMVLFFNWAI------KH 156
G F Q L +G DAL + D LD V + +SG FN A+ +
Sbjct: 243 GSFAQALCKEGRWGDALDLLEREDFKLDTV---LCTQMISGLMEASLFNEAMSFLHRMRC 299
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
+ +V +Y ++ ++K + +++ M EG NP + ++ ++ A
Sbjct: 300 NSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAY 359
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHV------GAASSLFNSM--KGKVLFNVM 268
A ++ R+ G N+ + +C R + A ++ M VL +
Sbjct: 360 AYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKIN 419
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
T N +G+ + +++KE++ +GF PD+ T++ +I L +A R+D A +F M
Sbjct: 420 TANFA-RCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEM 478
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
K+ G PD Y +I ++ G ++ ++ M S C PN+ TYT L+ LKS+++
Sbjct: 479 KKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQL 538
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL-------- 440
A ++F M+ P+ T ++ ++ LC G A +Y K +
Sbjct: 539 YQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEG 598
Query: 441 --------SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
++ Y L+ L K DL M +G + +Y+ ++ G C +G+
Sbjct: 599 KDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGE 658
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+++A V + G+ PS Y+ L +++ +L+ A + ++
Sbjct: 659 IDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 704
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 168/408 (41%), Gaps = 51/408 (12%)
Query: 142 SGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
S E V FF WA + Y+ + + LG F+ + +E D + L
Sbjct: 113 SPELCVRFFLWAERQVGYKHTGACYDALAEVLG----FEDPARTAERLLREIGEDDRDVL 168
Query: 202 SIVMDSFIR----AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+++ +R G +A++ LGRL+DFG + A
Sbjct: 169 GRLLNVLVRRCCLQGLWGEALEELGRLKDFGYRPSA------------------------ 204
Query: 258 SMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
+TYN ++ + GQV RV KE+ A GF D T + L + GR
Sbjct: 205 ----------VTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGR 254
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
DA+++ + K DT +IS + F+E M + M + PN+ TY
Sbjct: 255 WGDALDLLEREDFK---LDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRT 311
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
L++G LK +++ + M+ G PS S + C+ A ++ + G
Sbjct: 312 LLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCG 371
Query: 438 CKLSLTAYKLLLRRLSGFGKC--GMLLDLWHEMQESGYPSDGEIYEYVIAG----LCNIG 491
C Y + + + G + LLDL ++ E + + + A LC +G
Sbjct: 372 CPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVG 431
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ E A +++E +RKGF P Y+K+ L + +++ A+ LF+++K
Sbjct: 432 KFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMK 479
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 115/259 (44%), Gaps = 6/259 (2%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +Y ++ + + D VLS M K+ NP++ T + ++D + G+ KA+ +L
Sbjct: 678 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLS 737
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+E G + + ++ L + V A LF MK K N +TY I+I+ G
Sbjct: 738 LMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAG 797
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ + +L E+ + + ++G + R ++ + + M+ P Y
Sbjct: 798 LLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSK--RFLASLGLLEEMESHDTAPIAPVYG 855
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNM---DTYTRLISGLLKSRKVADALEVFEEM 398
+I ++ G + ++ +K M + NM D +T LI L S +V +A+ ++ EM
Sbjct: 856 MLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEM 915
Query: 399 LDRGIVPSTGTITSFLEPL 417
RGIVP ++ L
Sbjct: 916 RRRGIVPDLSAFVCLVKGL 934
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 171/384 (44%), Gaps = 18/384 (4%)
Query: 161 KDVKSYNVIVKAL---GR----RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
K+V SYN+++K L GR R+ FD M + PD+ T I++ + G+
Sbjct: 260 KNVCSYNILLKVLCGAGRVEDARQLFDEMAS----------PPDVVTYGILIHGYCALGE 309
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
+ A+++L + G++ +A V+ LC + V A ++ M KV+ + Y
Sbjct: 310 LENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTT 369
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
V+SG+ G +V R E+ +G + D +T++ LI GL RAG + +A +V M +
Sbjct: 370 VLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARR 429
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
D Y ++ Y G E + + M PN+ TYT L GL K V A
Sbjct: 430 LDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAAN 489
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
E+ EM ++G+ + T S + LC G AM G K + Y L+ L
Sbjct: 490 ELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDAL 549
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G+ DL EM ++G Y ++ G C G++E ++E L K P+
Sbjct: 550 CKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNA 609
Query: 513 LVYSKLSNKLLASNKLESAYNLFR 536
Y+ L + N ++S +++
Sbjct: 610 TTYNSLMKQYCIGNNMKSTTEIYK 633
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 160/346 (46%), Gaps = 10/346 (2%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
G++P E + V+ + +AI++ L D + S N++L LC V A
Sbjct: 230 GISPSPEACNAVLSRL----PLDEAIELFQGLPDKNVC----SYNILLKVLCGAGRVEDA 281
Query: 253 SSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
LF+ M +V+TY I+I G+ LG++ ++L ++VA G P++ ++ ++ L
Sbjct: 282 RQLFDEMASPP--DVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALL 339
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
GR+ DA+ V + M D Y V+S + + GD +++ M +
Sbjct: 340 CDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDG 399
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
TYT LI+GL ++ ++ +A +V +EML R + T T ++ C G A ++
Sbjct: 400 VTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNT 459
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+ G ++ Y L L G +L HEM G + Y +I GLC G
Sbjct: 460 MVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGY 519
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
L+ A+ M + G P Y+ L + L S +L+ A++L +++
Sbjct: 520 LDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEM 565
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 197/437 (45%), Gaps = 24/437 (5%)
Query: 81 NSVKRIDS--SRAVDEFLLPEERLRGVFLQKLKGKGVIEDALW----NVNVDLSLD---- 130
N+VK +D +R V+ P + + L KG + DAL V+ + LD
Sbjct: 312 NAVKLLDDMVARGVE----PNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVY 367
Query: 131 --VVGKVVNRGNLSGEAMVLFFNW--AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVL 186
V+ N+G+L V W ++ +A D +Y ++ L R VL
Sbjct: 368 TTVLSGFCNKGDL-----VSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVL 422
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
+M ++ D T ++++D + + G++ +A Q+ + G+ + + + LC++
Sbjct: 423 QEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQ 482
Query: 247 LHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
V AA+ L + M K L N TYN +I+G K G + + R + ++ A G PD T+
Sbjct: 483 GDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTY 542
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LI+ L ++G +D A ++ M + G P YN +++ + G + K + M
Sbjct: 543 TTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLE 602
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
N PN TY L+ + E+++ M R + P+ T ++ C
Sbjct: 603 KNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKE 662
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A + + + G +L+ ++Y L+R L+ K L+H+M++ G+ ++ ++Y + I
Sbjct: 663 AQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYID 722
Query: 486 GLCNIGQLENAVLVMEE 502
N LE + + +E
Sbjct: 723 FNFNEDNLEATLALCDE 739
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 173/414 (41%), Gaps = 36/414 (8%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y +++ + +L DM GV P+ + V+ G+V A+ ++
Sbjct: 293 DVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVV 352
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
+ + D VL C + + +A F+ M+ K L + +TY +I+G +
Sbjct: 353 EDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRA 412
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT--- 337
G++ E E+VL+E++A D +T++ L++G + G++ +A +V +TM ++G P+
Sbjct: 413 GELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTY 472
Query: 338 ------------------------------NA--YNAVISNYISVGDFDECMKYYKGMSS 365
NA YN++I+ G D+ M+ M +
Sbjct: 473 TALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDA 532
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
+P++ TYT LI L KS ++ A ++ +EMLD GI P+ T + C G
Sbjct: 533 AGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEG 592
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
+ + + + T Y L+++ +++ M + Y +I
Sbjct: 593 GKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIK 652
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G C ++ A E + KGF + YS L L K A LF ++
Sbjct: 653 GHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMR 706
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 110/250 (44%), Gaps = 19/250 (7%)
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+ FS D +F L+ L A + +++ G P A NAV+S DE
Sbjct: 201 KAFSSDPASFDLLLLCLPSA-------PLLRRVRQYGISPSPEACNAVLSRL----PLDE 249
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
++ ++G+ + N+ +Y L+ L + +V DA ++F+EM P T +
Sbjct: 250 AIELFQGLP----DKNVCSYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYGILIH 302
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
C+ G A+ + G + + T Y ++ L G+ L + +M
Sbjct: 303 GYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVIL 362
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
D +Y V++G CN G L +A +E RKG + Y+ L N L + +L+ A +
Sbjct: 363 DEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVL 422
Query: 536 RKIKIARQND 545
+++ +AR+ D
Sbjct: 423 QEM-LARRLD 431
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 168/377 (44%), Gaps = 4/377 (1%)
Query: 161 KDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
K+V S+N+++KAL C +M+ PD+ T ++ + G++ A+++
Sbjct: 253 KNVCSHNILLKALLSAGRLKDACQHFDEMSSP---PDVVTYGTMVHGYCVRGELENAVKL 309
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSK 279
L + GL+ +A V+ LC + V A + M V + + + VISG+
Sbjct: 310 LDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCS 369
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G + R+ +E+ G + D +T + LI GL RAG + +A V M +KG D
Sbjct: 370 KGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVT 429
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y +I Y G+ E + + M PN+ TYT L GL K V A E+ EM
Sbjct: 430 YTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMC 489
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
++G+ + T S + LC +G AM + + G + + Y L+ L G+
Sbjct: 490 NKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFD 549
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
++ EM + G Y ++ G C G++E ++E L K P+ + Y+ L
Sbjct: 550 RAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLM 609
Query: 520 NKLLASNKLESAYNLFR 536
+ ++S +++
Sbjct: 610 KQYCIDKNMKSTTEIYK 626
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 195/452 (43%), Gaps = 11/452 (2%)
Query: 97 LPEERL--RGVFLQKLKGKGVIEDALWNVN-VDLSLDVV--GKVVNRGNLSGE---AMVL 148
LP++ + + L+ L G ++DA + + + DVV G +V+ + GE A+ L
Sbjct: 250 LPDKNVCSHNILLKALLSAGRLKDACQHFDEMSSPPDVVTYGTMVHGYCVRGELENAVKL 309
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
A K + + Y ++ L + VL DM GV D + V+ F
Sbjct: 310 LDEMAAK--GLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGF 367
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNV 267
G + A ++ ++ GL D + ++ LC+ + A + M K L +V
Sbjct: 368 CSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDV 427
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TY ++I G+ K G +VE RV E+V +P+ +T++ L +GL + G + A E+
Sbjct: 428 VTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHE 487
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M KG + YN++I+ G+ ++ M+ M + ++ TYT LI L KS +
Sbjct: 488 MCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGE 547
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
A + +EMLD+GI PS T + C G + + + + ++ Y
Sbjct: 548 FDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNS 607
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L+++ +++ M + Y +I G C ++ A+ +E + KG
Sbjct: 608 LMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKG 667
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ YS L L K A F K++
Sbjct: 668 LRLTASSYSALIRLLNKKKKFSEARVFFDKMR 699
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 191/414 (46%), Gaps = 34/414 (8%)
Query: 110 LKGKGVIEDALWNVNVDLSLD-----------VVGKVVNRGNLSGEAMVLFFNWAIKHPN 158
L KG + DAL V D+++ V+ ++G+L+ A LF ++
Sbjct: 332 LCNKGQVSDAL-RVLEDMTMHGVALDAVVFTTVISGFCSKGDLAA-ARRLF--EEMQKRG 387
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+A D ++ ++ L R VL +M +G++ D+ T ++++D + + G + +A
Sbjct: 388 LAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAF 447
Query: 219 ----QMLGRLEDFGLKFDAESLNVVLWC-----LCQRLHVGAASSLFNSMKGKVL-FNVM 268
+M+GR + NVV + LC++ V AA+ L + M K L NV
Sbjct: 448 RVHNEMVGR---------RVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVY 498
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TYN +I+G K G + + R++ E+ A G D T++ LI+ L ++G D A + M
Sbjct: 499 TYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEM 558
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+KG P YN +++ + G + K + M N PN+ TY L+ + +
Sbjct: 559 LDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNM 618
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
E+++ M + + P+ T ++ C A+ +++ + G +L+ ++Y L
Sbjct: 619 KSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSAL 678
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
+R L+ K + +M+ G ++ ++Y + + N LE+ + + +E
Sbjct: 679 IRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDE 732
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 151/349 (43%), Gaps = 33/349 (9%)
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK------VLF------- 265
++L RL +GL ES N VL RL + A +LF + K +L
Sbjct: 214 ELLRRLRQYGLSPSPESCNAVL----SRLPLDEAIALFRELPDKNVCSHNILLKALLSAG 269
Query: 266 ----------------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
+V+TY ++ G+ G++ ++L E+ A+G ++ ++ +I
Sbjct: 270 RLKDACQHFDEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVI 329
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
L G++ DA+ V + M G D + VIS + S GD + ++ M
Sbjct: 330 ALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLA 389
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
+ T+T LI+GL ++ ++ +A V +EM+D+G+ T T ++ C G A +
Sbjct: 390 ADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRV 449
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ + ++ Y L L G +L HEM G + Y +I GLC
Sbjct: 450 HNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCK 509
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G LE A+ +M E G Y+ L + L S + + A+N+ +++
Sbjct: 510 FGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEM 558
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 96/245 (39%), Gaps = 55/245 (22%)
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+ FS D +F L+ L A E+ +++ G P + NAV+S DE
Sbjct: 194 KAFSSDPASFDLLLLCLPSA-------ELLRRLRQYGLSPSPESCNAVLSRL----PLDE 242
Query: 356 CMKYYKGMSSYN-CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ ++ + N C N+ L+ LL + ++ DA + F+EM
Sbjct: 243 AIALFRELPDKNVCSHNI-----LLKALLSAGRLKDACQHFDEM---------------- 281
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
PP + Y ++ G+ + L EM G
Sbjct: 282 -----SSPP-----------------DVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLE 319
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
S+ +Y VIA LCN GQ+ +A+ V+E+ G +V++ + + + L +A L
Sbjct: 320 SNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRL 379
Query: 535 FRKIK 539
F +++
Sbjct: 380 FEEMQ 384
>gi|15220166|ref|NP_178170.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264854|sp|Q9M8M3.1|PP136_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80550, mitochondrial; Flags: Precursor
gi|6730729|gb|AAF27119.1|AC018849_7 unknown protein; 31926-33272 [Arabidopsis thaliana]
gi|332198297|gb|AEE36418.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 448
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 173/370 (46%), Gaps = 11/370 (2%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA--KEGVNPDLETLSIVMD 206
FFNW + +++N ++ LG+ F+ +++ M E V P+ T IV
Sbjct: 67 FFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESV-PNHVTFRIVFK 125
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK----GK 262
++ A V +AI +L+DF L+ + N+V LC+ HV A L G
Sbjct: 126 RYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVD-ALCEHKHVVEAEELCFGKNVIGNGF 184
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ N +N+++ GWSKLG + + K++ EG + D ++S ++ + ++G+ A+
Sbjct: 185 SVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAV 244
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+++ MK + D AYN VI + + ++ ++ M CEPN+ T+ +I L
Sbjct: 245 KLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLL 304
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+ ++ DA + +EM RG P + T L P + ++ + + G + +
Sbjct: 305 CEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRL---EKPSEILSLFGRMIRSGVRPKM 361
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y +L+R+ +G +L +W M+ESG D Y VI L G L+ A EE
Sbjct: 362 DTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEE 421
Query: 503 SLRKGFCPSR 512
+ +G P R
Sbjct: 422 MIERGLSPRR 431
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 107/235 (45%), Gaps = 2/235 (0%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV--ISNYISVGDFDECM 357
P+ +TF + + A + +AI+ +D + + +T+ YN V + + V + +E
Sbjct: 115 PNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELC 174
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+ + N + ++ G K E +++M G+ + + +++ +
Sbjct: 175 FGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIM 234
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
C G P A+ +YK+ + KL + AY ++R + + ++ EM+E G +
Sbjct: 235 CKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNV 294
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
+ +I LC G++ +A +++E ++G P + Y L ++L +++ S +
Sbjct: 295 ATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLF 349
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/480 (23%), Positives = 202/480 (42%), Gaps = 70/480 (14%)
Query: 128 SLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLS 187
S +VV +++ GN A +F++ + + + ++ V++KA D ++L
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSR--KIPPTLFTFGVVMKAFCAVNEIDSALSLLR 241
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
DM K G P+ ++ S + +V +A+Q+L + G DAE+ N V+ LC+
Sbjct: 242 DMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFD 301
Query: 248 HVGAASSLFNSM--------------------------KGKVLF------NVMTYNIVIS 275
+ A+ + N M K LF ++ +N +I
Sbjct: 302 RINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIH 361
Query: 276 GWSKLGQVVEMERVLKEIVAE-GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ G++ + + VL ++V G PD T++ LI G + G + A+EV M+ KGC
Sbjct: 362 GFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCK 421
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ +Y ++ + +G DE MS+ +PN + LIS K ++ +A+E+
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY------------------------ 430
F EM +G P T S + LC A+ +
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 431 ----KKARKV-------GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
K+ARK+ G L Y L++ L G+ L+ +M G+
Sbjct: 542 RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I GLC G +E AV +E + +G P + ++ L N L + ++E +FRK++
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 182/436 (41%), Gaps = 68/436 (15%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +++N ++ L + + +++ M G PD T +M+ + G+V A +
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Query: 222 ---------------------GRLED-----------FGLKFDAESLNVVLWCLCQRLHV 249
GRL+D +G+ D + N +++ + V
Sbjct: 346 YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV 405
Query: 250 GAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
G A + + M+ K NV +Y I++ G+ KLG++ E VL E+ A+G P+++ F+ L
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPD-------------------------------- 336
I + RI +A+E+F M KGC PD
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 337 ---TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
T YN +I+ ++ G+ E K M + TY LI GL ++ +V A
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+FE+ML G PS + + LC G A+ K+ G + + L+ L
Sbjct: 586 LFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLC 645
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
G+ L ++ ++Q G P D + +++ LC G + +A L+++E + GF P+
Sbjct: 646 RAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHR 705
Query: 514 VYSKLSNKLLASNKLE 529
+S L ++ L+
Sbjct: 706 TWSILLQSIIPQETLD 721
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 170/393 (43%), Gaps = 7/393 (1%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F+W Y V++ LG F + +L M EG+ +M +
Sbjct: 97 LFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDY 156
Query: 209 IRAGQVYKAIQMLGRLED-FGLKFDAESLNVVLWCLCQ-RLHVGAASSLFNSMKGKVLFN 266
+AG + +++ + + + + +S NVVL L H AA+ ++ + K+
Sbjct: 157 DKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPT 216
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
+ T+ +V+ + + ++ +L+++ G P+S+ + LI L + R+++A+++ +
Sbjct: 217 LFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLE 276
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M GC PD +N VI +E K M P+ TY L++GL K
Sbjct: 277 EMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIG 336
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP-PHAAMMMYKKARKVGCKLSLTAY 445
+V A ++F + IV I F+ ++G A ++ G + Y
Sbjct: 337 RVDAAKDLFYRIPKPEIVIFNTLIHGFV----THGRLDDAKAVLSDMVTSYGIVPDVCTY 392
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ G G+ L++ H+M+ G + Y ++ G C +G+++ A V+ E
Sbjct: 393 NSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA 452
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P+ + ++ L + +++ A +FR++
Sbjct: 453 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 485
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 181/373 (48%), Gaps = 3/373 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN+++ A R + M + G NP + T + V+++F + G V +A ++ L
Sbjct: 303 AYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGL 362
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
++ G +A N ++ + + A+ L+ M+ K + + +T+NI++SG K G+
Sbjct: 363 KEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGRE 422
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ +R+LK+I G PD F + GL AGR+D+A+E M EKG P A+N+V
Sbjct: 423 EDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSV 482
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I+ Y G D+ + YK M + P+ T + L+ GL + ++ +A E+ +M+++G+
Sbjct: 483 IAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGL 542
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+ T L+ G A ++ + + G + A+ + LS G +
Sbjct: 543 SVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYN 602
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR-KGFCPSRLVYSKLSNKL 522
++ EM G + Y +I G C G+L N L +E+ +R +G P + + L
Sbjct: 603 VFLEMLRKGLIPNNFAYNSLICGFCKCGKL-NEALKLEKVMRHRGLLPDIFTTNMIIGGL 661
Query: 523 LASNKLESAYNLF 535
++ SA N+F
Sbjct: 662 CKQGRMRSAINVF 674
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 140/298 (46%), Gaps = 2/298 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
++ M ++G++ + ++++D F + G V A + G +E G+ D + + + L
Sbjct: 533 LIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLS 592
Query: 245 QRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
++ V A ++F M K L N YN +I G+ K G++ E ++ K + G PD
Sbjct: 593 KQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIF 652
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T + +I GL + GR+ AI VF M + G PD YN +I+ Y D M
Sbjct: 653 TTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRM 712
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ P++ TY I G SR++ A+ + +E++ GIVP+T T S L +CS
Sbjct: 713 YASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCS-DIL 771
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
AM++ + K+ ++ LLL + G L H++ E Y D Y+
Sbjct: 772 DRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPERTLMWGHKLSEIPYAFDEITYK 829
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 172/377 (45%), Gaps = 19/377 (5%)
Query: 154 IKHPNVAKDVKSYNVIVKA---LGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR 210
++ +A D ++N++V GR + D +L D++ G+ PD I +
Sbjct: 397 MRKKGIAPDGITFNILVSGHYKYGREEDGD---RLLKDISVLGLLPDRSLFDISVSGLCW 453
Query: 211 AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM-- 268
AG++ +A++ L + + GL + N V+ Q G F + K V F +
Sbjct: 454 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQ---AGLEDKAFEAYKLMVHFGLTPS 510
Query: 269 --TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
T + ++ G S G++ E ++ +++ +G S +++ F+ L++ + G + A ++
Sbjct: 511 PSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWG 570
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M+ +G PD A++A I G +E + M PN Y LI G K
Sbjct: 571 EMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCG 630
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
K+ +AL++ + M RG++P T + LC G +A+ ++ + G + Y
Sbjct: 631 KLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYN 690
Query: 447 LLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
L+ +G+ K +++ L + M SG D Y I G C+ ++ AVL+++E
Sbjct: 691 TLI---NGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDEL 747
Query: 504 LRKGFCPSRLVYSKLSN 520
+ G P+ + Y+ + N
Sbjct: 748 VSAGIVPNTVTYNSMLN 764
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 171/402 (42%), Gaps = 4/402 (0%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
V+ GN+ EA LF +K + + YN ++ + + D + +M
Sbjct: 342 VINAFCKEGNVV-EARKLFD--GLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMR 398
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
K+G+ PD T +I++ + G+ ++L + GL D ++ + LC +
Sbjct: 399 KKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLD 458
Query: 251 AASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A M K L +++ +N VI+ +S+ G + K +V G +P T S L+
Sbjct: 459 EAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLL 518
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
GL GR+ +A E+ M EKG + A+ ++ + GD + M
Sbjct: 519 MGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIF 578
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P++ ++ I GL K V +A VF EML +G++P+ S + C G + A+ +
Sbjct: 579 PDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKL 638
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
K R G + +++ L G+ ++++ +M ++G D Y +I G C
Sbjct: 639 EKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCK 698
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
+ NA ++ G P Y+ + +S ++ A
Sbjct: 699 AFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRA 740
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 147/344 (42%), Gaps = 3/344 (0%)
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
D L +M +F+ A ++A+++LGR+ + G++ A + ++ L + G LF
Sbjct: 195 DFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLF 254
Query: 257 NSM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
+ +G T++ +I G+ + G + E +L + P++ ++ +I
Sbjct: 255 KDVIRRGPQPCKY-TFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCI 313
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
GR DA+ F+ M E+GC P +N VI+ + G+ E K + G+ PN
Sbjct: 314 RGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIM 373
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y L++G +K R++ A ++EEM +GI P T + YG + K
Sbjct: 374 YNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDIS 433
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
+G + + + + L G+ ++ +M E G + VIA G +
Sbjct: 434 VLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLED 493
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
A + + G PS S L L + +L+ A L ++
Sbjct: 494 KAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQM 537
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 163/331 (49%), Gaps = 4/331 (1%)
Query: 165 SYNVIVKAL-GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+YN ++ +L GR + D + + +PD+ + ++V+ R GQV KA++++ R
Sbjct: 48 AYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVER 107
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLG 281
+ +FG D + N+++ LC+ V + ++ G + NV+T+ VISG+ K G
Sbjct: 108 MNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 167
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ + V ++VA G P+++T++ LI G G+ G + A+EV+ M C PD ++
Sbjct: 168 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 227
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM-LD 400
++I Y G D+ ++ + M+ + +PN+ T++ +I L K + +A+ + E+ L
Sbjct: 228 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLR 287
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
I P ++ LC G A ++ K + GC+ Y +L+ +
Sbjct: 288 PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISE 347
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ +HEM E+G D I+ L G
Sbjct: 348 AIMFFHEMVEAGCSPDSITVNCFISCLLKAG 378
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 149/328 (45%), Gaps = 40/328 (12%)
Query: 135 VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
++ RG + + + LF W I+ + DV S+NV++K + R ++ M + G
Sbjct: 56 LIGRGRVH-DVVALFERW-IQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGC 113
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF-DAESLNVVLWCLCQRLHVGAAS 253
+PD T +I++D R +V + ++L RL+ G+ + + V+ C+ + A
Sbjct: 114 SPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAM 173
Query: 254 SLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
+++N M ++ N +TYN++I+G+ K+G + V +++ PD +TFS LI+G
Sbjct: 174 AVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGY 233
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNA--------------------------------- 339
R G++DDA+ ++ M + P+
Sbjct: 234 CRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQ 293
Query: 340 ---YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN VI G DE KGM C P+ TYT LI G ++++A+ F
Sbjct: 294 AFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFH 353
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPH 424
EM++ G P + T+ F+ L G P+
Sbjct: 354 EMVEAGCSPDSITVNCFISCLLKAGMPN 381
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 4/350 (1%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
G +PD LS ++ S A + + +L + +FG + +A + N ++ L R V
Sbjct: 6 GYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDV 65
Query: 253 SSLFNSMKGKVLF--NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
+LF ++ +V ++N+VI G ++GQV + +++ + G SPD++T + L++
Sbjct: 66 VALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVD 125
Query: 311 GLGRAGRIDDAIEVFDTMKEKG-CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
GL R + EV ++ G C P+ + +VIS Y G ++ M Y M +
Sbjct: 126 GLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIM 185
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
PN TY LI+G K + A+EV+++M P T +S ++ C G A+ +
Sbjct: 186 PNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRI 245
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ-ESGYPSDGEIYEYVIAGLC 488
+ + + ++ + +++ L + + L +E+ IY VI LC
Sbjct: 246 WSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLC 305
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G+++ A L+ + KG P + Y+ L +++ A F ++
Sbjct: 306 KCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEM 355
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 114/246 (46%), Gaps = 2/246 (0%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT-MKEKGCGPDTNAYNAVISNYISVGDFDE 355
G ++ ++ L+ L GR+ D + +F+ ++++ PD ++N VI VG +
Sbjct: 41 GCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQK 100
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI-VPSTGTITSFL 414
++ + M+ + C P+ T+ L+ GL ++ +V+ EV + G+ +P+ T TS +
Sbjct: 101 ALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVI 160
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
C G AM +Y G + Y +L+ G G ++++ +M P
Sbjct: 161 SGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCP 220
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
D + +I G C GQL++A+ + + + P+ +S + + L N+ + A L
Sbjct: 221 PDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGL 280
Query: 535 FRKIKI 540
++ +
Sbjct: 281 LNELNL 286
>gi|224117008|ref|XP_002317451.1| predicted protein [Populus trichocarpa]
gi|222860516|gb|EEE98063.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 188/415 (45%), Gaps = 12/415 (2%)
Query: 145 AMVLFFNWAIKHPN--VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV-NPDLETL 201
A+ LF N K P+ + SY++I+ LGR K F+ M +L+ + +E + P
Sbjct: 25 ALQLFKNPNPKTPSKPFRYSLLSYDLIITKLGRAKMFNEMQEILAQLKEETLFTPKEALF 84
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+++ + RA A+++L L F ++ +S N +L LF ++
Sbjct: 85 CDIINFYGRARLPENALKLLVELPSFRVQRTVKSYNSLLSVFLMCKDFDKMRELFVGIEK 144
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
+ TYN++I G+ G++ + +V E+ G SP+ +TF LI G R+ +A
Sbjct: 145 LGKADACTYNLLIRGFCASGRLDDASKVFDEMTNRGVSPNVITFGNLIYGFCLHLRLKEA 204
Query: 322 IEV-FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
++ D +K P+ Y ++I G+ + K M E + Y+ LIS
Sbjct: 205 FKLKTDMVKVYRVYPNAYIYASLIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLIS 264
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
GL K+ + +AL V+E+M +RG P T T + C AA + + + GCK
Sbjct: 265 GLFKAGRKEEALGVWEDMKERGYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKP 324
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+ +Y ++LR L GK G DL+ +M G D Y + G CN Q + A ++
Sbjct: 325 DVISYNVILRELFEEGKRGEANDLFEDMPRRGCAPDVVSYRILFDGFCNGMQFKEAAFIL 384
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNK---LESAYNLFRKIKIARQNDYARRLWR 552
+E + KGF P K N+L L SA+N K K+ + LWR
Sbjct: 385 DEMIFKGFVPCSASICKFVNRLCEGKNEDLLRSAFNTLEKGKLVNVD-----LWR 434
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/481 (23%), Positives = 203/481 (42%), Gaps = 70/481 (14%)
Query: 128 SLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLS 187
S +VV V+ GN +F+ K ++ V ++ V++KAL D C +L
Sbjct: 184 SYNVVLDVLLAGNCPKVVPNVFYEMLSK--GISPTVYTFGVVMKALCLVNEVDSACALLK 241
Query: 188 DMAKEG--------------------VN---------------PDLETLSIVMDSFIRAG 212
DM + G VN PD+ T + + +
Sbjct: 242 DMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKML 301
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK--VLFN---- 266
++++A +++ R+ G ++ + V++ LC+ V A L N + VLFN
Sbjct: 302 RIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLIN 361
Query: 267 ---------------------------VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS 299
+ TYN +I G K G +V ++ E+ +G
Sbjct: 362 GYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCE 421
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P+ +T++ LI+ + GR+++A V D M KG + YN +IS + +
Sbjct: 422 PNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNM 481
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ MSS C+P++ T+ LI GL K K +AL ++++ML G++ +T T + +
Sbjct: 482 FGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLR 541
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
G A+ + GC L Y L++ L G L L+ +M G +
Sbjct: 542 RGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNIS 601
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I GLC G +++A+ + + + +G P + Y+ L N L + + + A NLF K++
Sbjct: 602 CNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQ 661
Query: 540 I 540
+
Sbjct: 662 V 662
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 197/454 (43%), Gaps = 48/454 (10%)
Query: 87 DSSRAVDEFLL----PEERLRGVFLQKLKGKGVIEDA------LWNVNVDLSLDVVGKVV 136
++++ VD LL P GV + L G +++A + N NV L ++ V
Sbjct: 305 EAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYV 364
Query: 137 NRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNP 196
+RG L V+ + ++ D+ +YN ++ L ++ + ++++M +G P
Sbjct: 365 SRGRLDEAKAVM--HESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEP 422
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
++ T +I++D F + G RLE+ A ++
Sbjct: 423 NVITYTILIDRFCKEG----------RLEE-------------------------ARNVL 447
Query: 257 NSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
+ M GK L N + YN +IS K +V + + ++ ++G PD TF+ LI GL +
Sbjct: 448 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 507
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
+ ++A+ ++ M +G +T YN +I ++ G E +K M C + TY
Sbjct: 508 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 567
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
LI L ++ + L +FE+M+ +G+ P+ + + LC G A+ +
Sbjct: 568 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 627
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
G + Y L+ L G+ L+L+ ++Q G D Y +I+ C G ++
Sbjct: 628 RGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDD 687
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
A L++ + GF P+ + + L + + E
Sbjct: 688 AHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/464 (21%), Positives = 180/464 (38%), Gaps = 87/464 (18%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV-------------- 194
F WA Y +++ LG F + +L M +EG+
Sbjct: 97 LFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHY 156
Query: 195 ----------------------NPDLETLSIVMDSFIRAGQVYKAI-----QMLGRLEDF 227
P + ++V+D + AG K + +ML +
Sbjct: 157 GRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLL-AGNCPKVVPNVFYEMLSK---- 211
Query: 228 GLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEM 286
G+ + VV+ LC V +A +L M + + N + Y +I K+G+V E+
Sbjct: 212 GISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEV 271
Query: 287 -----------------------------------ERVLKEIVAEGFSPDSLTFSFLIEG 311
+++ ++ GF+P+S T+ L+ G
Sbjct: 272 LKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHG 331
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK-YYKGMSSYNCEP 370
L R G++D+A + + + P+ +N +I+ Y+S G DE ++ M S C P
Sbjct: 332 LCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGP 387
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
++ TY LI GL K + A E+ EM +G P+ T T ++ C G A +
Sbjct: 388 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 447
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
+ G L+ Y L+ L K L+++ +M G D + +I GLC +
Sbjct: 448 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 507
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
+ E A+ + ++ L +G + + Y+ L + L ++ A L
Sbjct: 508 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKL 551
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 1/236 (0%)
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
+ LI+ LG AG + MK++G + + ++ +Y G + + M
Sbjct: 113 VYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 172
Query: 364 SS-YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
Y+CEP +Y ++ LL VF EML +GI P+ T ++ LC
Sbjct: 173 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 232
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
+A + K + GC + Y+ L+ L G+ +L L EM G D +
Sbjct: 233 VDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFND 292
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
I GLC + ++ A +++ L +GF P+ Y L + L K++ A L K+
Sbjct: 293 AIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV 348
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 129/529 (24%), Positives = 237/529 (44%), Gaps = 43/529 (8%)
Query: 24 FSFSTSVRSNL-SYNELLSNQKKNMSSL----DEHHVLKELSDLFQISSHNSF---PNVY 75
F ST+ NL + NE S+ K L EH + L I++ SF P Y
Sbjct: 20 FVLSTNPVPNLKAENEEKSSVLKEADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTY 79
Query: 76 KESRSNSVKRIDSSRAVD--EFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVG 133
+ ++++ S R +D ++LL + +L G+ + DL + V+G
Sbjct: 80 QMM----IEKLASEREMDCVQYLLQQMKLEGISCSE----------------DLFISVIG 119
Query: 134 KVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG 193
R S +A+ F+ ++ V VK YN I+ AL F + + S+M K+G
Sbjct: 120 SY-RRAGSSEQALKTFYR--MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDG 176
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAAS 253
+ P++ T +I++ + + +V A ++L + G D S ++ LC+ V A
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAR 236
Query: 254 SLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
L S +V YN +I+G K E ++L E++ +G P+ ++++ +I L
Sbjct: 237 ELAMSFTP----SVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALS 292
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
AG ++ ++ V M +GC P+ + + ++I + G E + ++ M PN+
Sbjct: 293 DAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVV 352
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
Y L+ GL R + DA+ VF +M G P+ T ++ ++ G A ++
Sbjct: 353 AYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWM 412
Query: 434 RKVGCKLSLTAYKLL---LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
GC ++ AY + L R S F + L++ MQ P + + I GLC
Sbjct: 413 ITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIE---NMQVENCPPNTVTFNTFIKGLCGS 469
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G+++ A+ V ++ G P+ Y++L + LL + A+ L + ++
Sbjct: 470 GRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDME 518
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 177/401 (44%), Gaps = 8/401 (1%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V YN ++ + + F+ +L +M +G++P++ + + ++++ AG V ++ +L
Sbjct: 246 VPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLA 305
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLG 281
++ G + + ++ + A ++ M + V+ NV+ YN ++ G
Sbjct: 306 KMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKR 365
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ + V ++ G P+ T+S LI+G +AG +D A EV++ M GC P+ AY
Sbjct: 366 SLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYT 425
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++ F++ + M NC PN T+ I GL S +V A++VF++M +
Sbjct: 426 CMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNS 485
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G P+T T L+ L A + K G +L+L Y ++ G G
Sbjct: 486 GCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEA 545
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+L +M G D VI C G++ A+ +M+ + P + Y+ L +
Sbjct: 546 LELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISG 605
Query: 522 LLASNKLESAYNLFRKI-------KIARQNDYARRLWRSKG 555
+ +E A R++ +A N R L+ + G
Sbjct: 606 ICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMG 646
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 130/268 (48%), Gaps = 10/268 (3%)
Query: 139 GNLSGEAMVLFFNWAIKH---PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
G+L G + V +NW I H PNV +Y +V L R F+ ++ +M E
Sbjct: 400 GDLDGASEV--WNWMITHGCHPNVV----AYTCMVDVLCRNSMFNQAYCLIENMQVENCP 453
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P+ T + + +G+V AI++ ++ + G + + N +L L + G A L
Sbjct: 454 PNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGL 513
Query: 256 FNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
M+ + + N++TYN +I G+ G + E +L ++V G PD++T + +I+ +
Sbjct: 514 VKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCK 573
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G+++ AI++ D + PD AY ++IS + +E + Y + M S PN+ T
Sbjct: 574 QGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVAT 633
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRG 402
+ L+ L + + A++ + +L G
Sbjct: 634 WNVLVRHLFSNMGHSGAVQFLDAVLGSG 661
>gi|297839201|ref|XP_002887482.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333323|gb|EFH63741.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 490
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 199/451 (44%), Gaps = 16/451 (3%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E AL + VDL+ VV K++ R + FF WA + + + +YN ++ L
Sbjct: 10 MEKALDDSVVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSS 69
Query: 176 RKFFDFMCNVLSDMA------KEGVNPDLETLSIVMDSFIRAGQVY-KAIQMLGRLEDFG 228
K+ + ++ DM K+ V P I+++ + + Y +Q + +
Sbjct: 70 TKYKNKQFRIVIDMLDYMKRNKKTVVP----ADILLEILRKYCERYLTHVQKFAKRKRIR 125
Query: 229 LKFDAE--SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEM 286
+K E + N++L LC+ V +L M+ +V + T+N++ GW ++ +
Sbjct: 126 VKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDATTFNVLFFGWCRVRDPKKA 185
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG---CGPDTNAYNAV 343
++L+E++ G P++ T+ I+ +AG +D+A ++F+ M KG P + +
Sbjct: 186 MKLLEEMIQAGHKPENFTYCAAIDTFCQAGMVDEAADLFEFMITKGSVVSAPTAKTFALM 245
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I +EC + M S C P++ TY +I G+ + KV +A + +EM ++G
Sbjct: 246 IVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAGKVEEAYKFLDEMSNKGY 305
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P T FL LC A+ +Y + + C S+ Y +L+ +
Sbjct: 306 PPDIVTYNCFLRVLCENRKSDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFN 365
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
W EM E D E Y +I GL + + + A ++EE + KG + +L
Sbjct: 366 TWKEMDERDCVQDIETYCVMINGLFDCHRAKEACFLLEEVVNKGLKLPYRAFDSFLMRLS 425
Query: 524 ASNKLESAYNLFRKIKIARQNDYARRLWRSK 554
L++ + L +K + ARR S+
Sbjct: 426 TVGNLKAIHKLSEHMKKFYNHSMARRFALSE 456
>gi|11120809|gb|AAG30989.1|AC012396_25 hypothetical protein [Arabidopsis thaliana]
Length = 466
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 199/445 (44%), Gaps = 12/445 (2%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E AL +VDL+ VV K++ R + FF WA + + + +YN ++ L
Sbjct: 10 MEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSS 69
Query: 176 RKF----FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY-KAIQMLGRLEDFGLK 230
K+ F + ++L M + N + + ++++ + + Y +Q + + +K
Sbjct: 70 TKYKNKQFRIVIDMLDYMKRN--NKTVVLVDVLLEILRKYCERYLTHVQKFAKRKRIRVK 127
Query: 231 FDAE--SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMER 288
E + N++L LC+ V +L M+ +V + T+N++ GW ++ + +
Sbjct: 128 TQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMK 187
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG---CGPDTNAYNAVIS 345
+L+E++ G P++ T+ I+ +AG +D+A ++FD M KG P + +I
Sbjct: 188 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 247
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+EC + M S C P++ TY +I G+ + KV +A + +EM ++G P
Sbjct: 248 ALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 307
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
T FL LC A+ +Y + + C S+ Y +L+ + W
Sbjct: 308 DIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTW 367
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
EM + D E Y +I GL + + + A ++EE + KG V+ +L
Sbjct: 368 TEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEV 427
Query: 526 NKLESAYNLFRKIKIARQNDYARRL 550
L++ + + +K + ARR
Sbjct: 428 GNLKAIHKVSEHMKKFYNHSMARRF 452
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 181/382 (47%), Gaps = 1/382 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ A ++ ++N ++ L R F+ + VL+ M++ G PD+ + ++D + G + A
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
++L R+ +GLK + N VL LC A L + M K + +T+NI++
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ + G V + +L+++++ G PD +T++ +I G + G ID+A+ + +M GC P+
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
T +Y V+ S G + + + M C PN T+ LI+ L K V A+E+ +
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+ML G P + ++ ++ L G A+ + G + Y + LS G
Sbjct: 486 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ ++ ++ ++++ SD +Y VI+ LC + + A+ + G P+ Y+
Sbjct: 546 RVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 605
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
L L + + A L ++
Sbjct: 606 MLIKGLASEGLAKEAQELLSEL 627
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 172/371 (46%), Gaps = 1/371 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y+VI++A R F VL M +G D ++V+++ G V +A+ +L +L
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVV 284
FG + D S N VL LC G L + M + N++T+N +I + G
Sbjct: 209 FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFE 268
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ VL ++ G +PD ++ +I+G+ + G ++ A E+ + M G P+ YN V+
Sbjct: 269 RVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVL 328
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
S + E + M +C + T+ L+ ++ V +E+ E+ML G +
Sbjct: 329 KGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCM 388
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P T T+ + C G A+M+ K GCK + +Y ++L+ L G+ +L
Sbjct: 389 PDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEEL 448
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+M + G P + + +I LC G +E A+ ++++ L G P + YS + + L
Sbjct: 449 MSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK 508
Query: 525 SNKLESAYNLF 535
+ K E A L
Sbjct: 509 AGKTEEALELL 519
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 165/345 (47%), Gaps = 2/345 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ SYN ++K L K + + ++ +M + P++ T + ++ R G + ++L
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVL 274
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
++ + G D ++ +C+ H+ A+ + N M L NV+ YN V+ G
Sbjct: 275 AQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSA 334
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ E E +L E+ + D +TF+ L++ + G +D IE+ + M GC PD Y
Sbjct: 335 ERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
VI+ + G DE + K MSS C+PN +YT ++ GL + + DA E+ +M+
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G P+ T + + LC G A+ + K+ GC L +Y ++ L GK
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+L + M G + IY + L G++ N V+ M ++++
Sbjct: 515 ALELLNVMVNKGISPNTIIYSSIACALSREGRV-NKVIQMFDNIK 558
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 111/245 (45%), Gaps = 1/245 (0%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N T+ V+ G G++ + VL E+ +G +P + ++E R+G +++ V
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ M KGC DT N V++ G DE + + ++ + CE ++ +Y ++ GL +
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
++ D E+ +EM+ P+ T + + LC G + + + GC + Y
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
++ + G + ++ + M G + Y V+ GLC+ + + A ++ E +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349
Query: 506 KGFCP 510
K CP
Sbjct: 350 KD-CP 353
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 106/272 (38%), Gaps = 38/272 (13%)
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V+ YN +++G+ + GQ+ R+ + P++ TF ++ GL GRI DA+EV D
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M KGC P Y+ ++ G F
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFR-------------------------------- 163
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+++ V E M +G TG L +C G A+ + +K GC+ + +Y
Sbjct: 164 ---NSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYN 220
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
+L+ L + G + +L EM + + +I LC G E V+ +
Sbjct: 221 AVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P +Y+ + + + LE A + ++
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 181/382 (47%), Gaps = 1/382 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ A ++ ++N ++ L R F+ + VL+ M++ G PD+ + ++D + G + A
Sbjct: 246 DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
++L R+ +GLK + N VL LC A L + M K + +T+NI++
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ + G V + +L+++++ G PD +T++ +I G + G ID+A+ + +M GC P+
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
T +Y V+ S G + + + M C PN T+ LI+ L K V A+E+ +
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+ML G P + ++ ++ L G A+ + G + Y + LS G
Sbjct: 486 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ ++ ++ ++++ SD +Y VI+ LC + + A+ + G P+ Y+
Sbjct: 546 RVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 605
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
L L + + A L ++
Sbjct: 606 MLIKGLASEGLAKEAQELLSEL 627
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 172/371 (46%), Gaps = 1/371 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y+VI++A R F VL M +G D ++V+++ G V +A+ +L +L
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVV 284
FG + D S N VL LC G L + M + N++T+N +I + G
Sbjct: 209 FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFE 268
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ VL ++ G +PD ++ +I+G+ + G ++ A E+ + M G P+ YN V+
Sbjct: 269 RVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVL 328
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
S + E + M +C + T+ L+ ++ V +E+ E+ML G +
Sbjct: 329 KGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCM 388
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P T T+ + C G A+M+ K GCK + +Y ++L+ L G+ +L
Sbjct: 389 PDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEEL 448
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+M + G P + + +I LC G +E A+ ++++ L G P + YS + + L
Sbjct: 449 MSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK 508
Query: 525 SNKLESAYNLF 535
+ K E A L
Sbjct: 509 AGKTEEALELL 519
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 165/345 (47%), Gaps = 2/345 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ SYN ++K L K + + ++ +M + P++ T + ++ R G + ++L
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVL 274
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
++ + G D ++ +C+ H+ A+ + N M L NV+ YN V+ G
Sbjct: 275 AQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSA 334
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ E E +L E+ + D +TF+ L++ + G +D IE+ + M GC PD Y
Sbjct: 335 ERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
VI+ + G DE + K MSS C+PN +YT ++ GL + + DA E+ +M+
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G P+ T + + LC G A+ + K+ GC L +Y ++ L GK
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+L + M G + IY + L G++ N V+ M ++++
Sbjct: 515 ALELLNVMVNKGISPNTIIYSSIACALSREGRV-NKVIQMFDNIK 558
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 111/245 (45%), Gaps = 1/245 (0%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N T+ V+ G G++ + VL E+ +G +P + ++E R+G +++ V
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ M KGC DT N V++ G DE + + ++ + CE ++ +Y ++ GL +
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
++ D E+ +EM+ P+ T + + LC G + + + GC + Y
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
++ + G + ++ + M G + Y V+ GLC+ + + A ++ E +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349
Query: 506 KGFCP 510
K CP
Sbjct: 350 KD-CP 353
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 106/272 (38%), Gaps = 38/272 (13%)
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V+ YN +++G+ + GQ+ R+ + P++ TF ++ GL GRI DA+EV D
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M KGC P Y+ ++ G F
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFR-------------------------------- 163
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+++ V E M +G TG L +C G A+ + +K GC+ + +Y
Sbjct: 164 ---NSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYN 220
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
+L+ L + G + +L EM + + +I LC G E V+ +
Sbjct: 221 AVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEH 280
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P +Y+ + + + LE A + ++
Sbjct: 281 GCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 190/410 (46%), Gaps = 13/410 (3%)
Query: 135 VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
+++R +L + + F I V +N +++ L ++ + +E +
Sbjct: 119 LMHRTDLGFSVLAIHFKKGIPFNQVI-----FNTLLRGLFAENKVKDAVHLFKKLVRENI 173
Query: 195 -NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAAS 253
P+ VM+ + G KA +L +E K + ++V+ C+ + A+
Sbjct: 174 CEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGAT 233
Query: 254 SLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
SL N MK K + ++ TY+ +I KL Q + + E++ P+ TF+ +I+GL
Sbjct: 234 SLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL 293
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
+ G+++DA E+ M EKG PD YN +I Y G D + + M + + EPN+
Sbjct: 294 CKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNI 353
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
+Y LI+G + +K+ +A++V E+ +G+ PS T L L G +A + +
Sbjct: 354 ISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDE 413
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCN 489
G L + LL G+ K G++ + +H+++ ++ +IY VI GLC
Sbjct: 414 MLSAGHIPDLYTHCTLL---GGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCK 470
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G+L+ A E+ G P + Y+ + + L+ A ++ RK++
Sbjct: 471 NGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKME 520
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 167/364 (45%), Gaps = 14/364 (3%)
Query: 98 PEERLRGVFLQKLKGKG----------VIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMV 147
P E + G + L KG ++E N + V+ G L G +
Sbjct: 176 PNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSL 235
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
L +K ++ D+ +Y+ ++ AL + ++ + + +M + P++ T + V+D
Sbjct: 236 L---NEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFN 266
+ G+V A +++ + + G+ D + N+++ R V A +F+SM K + N
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPN 352
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
+++YNI+I+G+++ ++ E +V +EI +G P +T + L+ GL GR A FD
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFD 412
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M G PD + ++ Y G +E M ++ + + N+ YT +I GL K+
Sbjct: 413 EMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNG 472
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
K+ A FE++ G+ P T T+ + C G A M +K GC Y
Sbjct: 473 KLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYN 532
Query: 447 LLLR 450
+++R
Sbjct: 533 VIVR 536
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 159/347 (45%), Gaps = 7/347 (2%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y++++ A + D ++L++M ++ + PD+ T S ++D+ + Q + +
Sbjct: 216 YSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMI 275
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
+ + + N V+ LC+ V A + M K V +V+TYN++I G+ GQV
Sbjct: 276 HLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVD 335
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ ++ + P+ ++++ LI G R +ID+A++V + +KG P N ++
Sbjct: 336 RAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLL 395
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+G ++ M S P++ T+ L+ G K+ V +A+ F ++ R
Sbjct: 396 HGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRED 455
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML--- 461
+ T+ ++ LC G A ++K +G + Y + +SG+ + G+L
Sbjct: 456 TNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAM---ISGYCQEGLLDEA 512
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
D+ +M+++G +D Y ++ G ++ +EE K F
Sbjct: 513 KDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSF 559
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 163/384 (42%), Gaps = 2/384 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V S++ ++KAL K + + ++ ++ K + LSIV++S + +L
Sbjct: 72 VVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLA 131
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--NVMTYNIVISGWSKL 280
G+ F+ N +L L V A LF + + + N + Y V++G K
Sbjct: 132 IHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKK 191
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + +L+ + P++ +S +I+ + G +D A + + MK+K PD Y
Sbjct: 192 GHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTY 251
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +I + ++ + M N PN+ T+ +I GL K KV DA E+ M++
Sbjct: 252 STLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIE 311
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G+ P T ++ G A ++ + ++ +Y +L+ + K
Sbjct: 312 KGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDE 371
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ + E+ + G ++ GL +G+ ++A +E L G P + L
Sbjct: 372 AMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLG 431
Query: 521 KLLASNKLESAYNLFRKIKIARQN 544
+ +E A + F K++ R++
Sbjct: 432 GYFKNGLVEEAMSHFHKLERRRED 455
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 1/258 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V DV +YN+I+ G R D + M + + P++ + +I+++ + R ++ +A+
Sbjct: 314 VDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAM 373
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
Q+ + GLK + NV+L L + +A + F+ M + ++ T+ ++ G+
Sbjct: 374 QVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGY 433
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G V E ++ + ++ +I+GL + G++D A F+ + G PD
Sbjct: 434 FKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDV 493
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y A+IS Y G DE + M C + TY ++ G L+S KV++ EE
Sbjct: 494 ITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEE 553
Query: 398 MLDRGIVPSTGTITSFLE 415
+ + T+ ++
Sbjct: 554 IAGKSFSFEAATVELLMD 571
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 181/384 (47%), Gaps = 2/384 (0%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
P + DV SY ++K L K D C + ++ G +P++ + V+D ++AG++
Sbjct: 102 PKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIED 161
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVIS 275
++ + + VV+ LC+ + A +F M K + + +TY +I
Sbjct: 162 GLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLID 221
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G+SK ++ E ++L ++ +G P ++T+ ++ G + I++A EV M+E+GC P
Sbjct: 222 GFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEP 281
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+ +++S Y+S G +E + M++ C P++ YT LI L + +V +A VF
Sbjct: 282 GLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVF 341
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
+ M+++G P T + ++ G AA + + K G AY L+
Sbjct: 342 DSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKL 401
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV- 514
+ ++ M SG + + ++ GL G+ + A + +E L K P LV
Sbjct: 402 ERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVS 461
Query: 515 YSKLSNKLLASNKLESAYNLFRKI 538
Y+ L + L + ++ A+ F+++
Sbjct: 462 YTILIDGLGKAGRVSEAFLQFQEM 485
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 160/370 (43%), Gaps = 5/370 (1%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ SYN ++ L D + M G PD+ + ++ F +AGQ ++L
Sbjct: 7 IVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLN 66
Query: 223 R-LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLG 281
+ L+ F + + +C L G F ++ K +V++Y VI G +
Sbjct: 67 QALKRFRPDVFLYTSVIHGYCKAGDLDTG----YFRAVTPKASLDVISYTTVIKGLADSK 122
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ E + +E+ G SP+ + ++ +I+GL +AGRI+D ++ F+ M C P Y
Sbjct: 123 RIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYT 182
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
VI + K ++ M C P+ TYT LI G K+ K+ +A ++ + ML +
Sbjct: 183 VVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 242
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G P+ T S + C + A + + R+ GC+ L + LL G+
Sbjct: 243 GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA 302
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+ EM G D +Y +I L + G++ A V + + KG P L Y +
Sbjct: 303 YQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQN 362
Query: 522 LLASNKLESA 531
+E+A
Sbjct: 363 FSKIGNVEAA 372
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 138/310 (44%), Gaps = 2/310 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y IV + + V++ M + G P L + ++ ++ G+ +A Q+L +
Sbjct: 250 TYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEM 309
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
G D ++ L V A +F+SM K + +TY +I +SK+G V
Sbjct: 310 TARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNV 369
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+L+ + G PD ++ L++G + R+D A V+D M G P+ +N +
Sbjct: 370 EAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVL 429
Query: 344 ISNYISVGDFDECMKYYKGM-SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+ G D +K M P + +YT LI GL K+ +V++A F+EM+DRG
Sbjct: 430 MHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRG 489
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
I+P T TS + L G A + + K+G + AY L+ L
Sbjct: 490 IIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAW 549
Query: 463 DLWHEMQESG 472
D++ EM + G
Sbjct: 550 DVFQEMMKRG 559
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 124/252 (49%), Gaps = 3/252 (1%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A D +Y I++ + + +L MAK GV PD + +MD +++ +V +A
Sbjct: 350 APDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFG 409
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGW 277
+ R+ G+K +A + NV++ L + A SLF M K +V +++Y I+I G
Sbjct: 410 VYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGL 469
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G+V E +E++ G P+ T++ LI L +AGRI +A ++ + M + G PD
Sbjct: 470 GKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDV 529
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
AY+A+I+ I D ++ M C PN TY L G + + D LE ++
Sbjct: 530 QAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD-LEAVKQ 588
Query: 398 MLDRGIVPSTGT 409
+G+ G+
Sbjct: 589 HFSQGVAMEAGS 600
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 116/228 (50%), Gaps = 2/228 (0%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
+V M ++G PD T ++ +F + G V A ++L + G+ D + N ++
Sbjct: 339 HVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGY 398
Query: 244 CQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA-EGFSPD 301
+ V A +++ M + N +T+N+++ G K G+ + KE++ E P
Sbjct: 399 VKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPT 458
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
++++ LI+GLG+AGR+ +A F M ++G P+ + Y ++I + G E K +
Sbjct: 459 LVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVE 518
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
M P++ Y+ LI+GL+ S V A +VF+EM+ RG P+ T
Sbjct: 519 DMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVT 566
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 115/308 (37%), Gaps = 66/308 (21%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA----------------- 339
G P ++++ +I GL ++D+A + F++M + GC PD A
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61
Query: 340 -----------------YNAVISNYISVGDFD---------------------------- 354
Y +VI Y GD D
Sbjct: 62 HKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADS 121
Query: 355 ----ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
E + ++ + + C PN+ YT +I GLLK+ ++ D L+ FEEM VP+ T
Sbjct: 122 KRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTY 181
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
T ++ LC A ++++ + GC Y L+ S K L M
Sbjct: 182 TVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLT 241
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G Y ++ G C + + A V+ + +G P +++ L + L+ + E
Sbjct: 242 KGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEE 301
Query: 531 AYNLFRKI 538
AY + ++
Sbjct: 302 AYQVLTEM 309
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 185/386 (47%), Gaps = 13/386 (3%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K V D++SY++++ AL + S M +PD+ T +++MD + + GQ
Sbjct: 167 MKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQ 223
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
Y+A ++ + G + + + ++++ C C+ V A +F M + + N +T+N
Sbjct: 224 TYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNT 283
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA-GRIDDAIEVFDTMKEK 331
+I+G+ K G + + ++ E+ G +T++ LI+ L + G + A+++F+ ++
Sbjct: 284 LIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGA 343
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G P YN++I + E M+Y+ M C PN+ TY+ LI GL K R++ +A
Sbjct: 344 GLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEG-KCAPNVITYSILIDGLCKVRRMKEA 402
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+ E+M G P+ T + C G +A++ ++K + GC + + L+
Sbjct: 403 AKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDG 462
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF--C 509
L + L L M G D Y +I+GLC+ ++E+A + L G
Sbjct: 463 LCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDA-----QRLFDGMACA 517
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLF 535
P+ ++ L L A K+E A N+
Sbjct: 518 PNVTTFNFLIRGLCAQKKVEEARNIL 543
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 170/355 (47%), Gaps = 8/355 (2%)
Query: 186 LSDMAKEGVNPDLETLSIVMDSFI----RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLW 241
L DM K + T ++V+ A ++ +A++ ++ G++ D ES +++L
Sbjct: 125 LQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLS 184
Query: 242 CLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
L + A +LF++M ++MTYN+++ G+ K+GQ E + ++KEI+ G+ P+
Sbjct: 185 ALSDSGRMAEAHALFSAMTCSP--DIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPN 242
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
T+S +I + ++++A EVF M E C P+ +N +I+ + G ++ +K +
Sbjct: 243 VFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFA 302
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSR-KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
M C+ + TY LI L K R V A+++F ++ G+ P+ T S ++ C
Sbjct: 303 EMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDA 362
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
AM + + C ++ Y +L+ L + +M+ GY Y
Sbjct: 363 RRLSEAMQYFDEMEG-KCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTY 421
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+I G C G+L++A+L E+ G P+ ++++ L + L + + L
Sbjct: 422 GGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLL 476
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 191/426 (44%), Gaps = 51/426 (11%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A + +YNV+++ + +V SDM G+ P+ T++ ++ GQ+ A++
Sbjct: 29 APNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALK 88
Query: 220 MLGRLEDFGLKFDAESLNVVL--WCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISG- 276
+ ++ + S N++L + + R+ A + L + K TYN+V+ G
Sbjct: 89 LFREMQAGPFLPTSASHNILLRGFFMAGRVR-DALAHLQDMRKSSSSVATGTYNLVLKGL 147
Query: 277 -W-----SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
W ++L Q +E KE+ A G PD ++ L+ L +GR+ +A +F M
Sbjct: 148 CWENKSANRLEQAMEF---FKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT- 203
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
C PD YN ++ Y +G E K + EPN+ TY+ +I+ K KV +
Sbjct: 204 --CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEE 261
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A EVF +M++ VP+ T + + C G A+ ++ + K+GCK ++ Y L+
Sbjct: 262 AWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLID 321
Query: 451 RLS-GFGKCGMLLDLWHEMQESGY-PS---------------------------DGEI-- 479
L G +DL+++++ +G P+ +G+
Sbjct: 322 SLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAP 381
Query: 480 ----YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
Y +I GLC + +++ A +E+ G+ P+ + Y L N +L+SA F
Sbjct: 382 NVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFF 441
Query: 536 RKIKIA 541
K+K+A
Sbjct: 442 EKMKLA 447
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 39/275 (14%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA-GQVYK 216
N + ++N ++ + + + ++M K G + T + ++DS + G VY
Sbjct: 273 NCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYT 332
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISG 276
A+ + +LE GL + N ++ C + A F+ M+GK NV+TY+I+I G
Sbjct: 333 AVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVITYSILIDG 392
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLT-------------------------------- 304
K+ ++ E + L+++ A G++P +T
Sbjct: 393 LCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPN 452
Query: 305 ---FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
F+ LI+GL +A R +D + + M +GC PD YN +IS S ++ + +
Sbjct: 453 TVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFD 512
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
GM+ C PN+ T+ LI GL +KV +A + +
Sbjct: 513 GMA---CAPNVTTFNFLIRGLCAQKKVEEARNILD 544
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 130/272 (47%), Gaps = 7/272 (2%)
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
N ++SG + + R+ KE++A F+P++ T++ LI G + G++ A+ VF MK
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
G P+ + N ++ +G +K ++ M + P ++ L+ G + +V D
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLC----SYGPPHAAMMMYKKARKVGCKLSLTAYK 446
AL ++M +TGT L+ LC S AM +K+ + G + L +Y
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
+LL LS G+ L+ M S D Y ++ G C IGQ A +M+E L+
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G+ P+ YS + N +K+E A+ +F K+
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKM 269
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 208/435 (47%), Gaps = 40/435 (9%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
+ EAM ++ A+ ++ V++Y+V++ A G+++ D + +L++M GV P+
Sbjct: 183 KSGFDAEAMEVY--KAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPN 240
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ + +I + +A + +A +LG++ED G K D + V++ LC + A ++F
Sbjct: 241 VYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFW 300
Query: 258 SMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
MK + +TY ++ G + V +VA+G++ + ++++ +++ L + G
Sbjct: 301 KMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVG 360
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
R+D+A+ VFD MKEKG P+ +YN++IS ++ FD ++ + M++ PN T+
Sbjct: 361 RVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHV 420
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
I+ KS + A++ +E M +GIVP + L L G A ++ + + +
Sbjct: 421 LFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAM 480
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY----------------------- 473
G Y ++++ S K ++ + +M ESG
Sbjct: 481 GVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEA 540
Query: 474 -------------PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
P++G Y +++GL G+++ + ++EE R + P+ + Y+ + +
Sbjct: 541 WQLFHKLKEMKIEPTNG-TYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLD 599
Query: 521 KLLASNKLESAYNLF 535
L + ++ A ++
Sbjct: 600 CLSKNGEVNCAIDML 614
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 186/425 (43%), Gaps = 36/425 (8%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA- 217
V +V SY + ++ LG+ FD ++L M G PD+ T ++++ AG++ A
Sbjct: 237 VKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAK 296
Query: 218 ------------------IQMLGRLEDFG-----------LKFDAESLNVVLW-----CL 243
I +L + D G + D + N+V + L
Sbjct: 297 AVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDAL 356
Query: 244 CQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
CQ V A ++F+ MK K + +YN +ISG+ K + + A G SP+
Sbjct: 357 CQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNG 416
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
T I G++G+ AI+ ++ MK KG PD A NAV+ + G + +
Sbjct: 417 YTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYE 476
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
+ + P+ TYT +I K+ K +A+ F +M++ G VP + S ++ L G
Sbjct: 477 LKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGK 536
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
+ A ++ K +++ + + Y LL L GK ++ L EM + YP + Y
Sbjct: 537 GNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNT 596
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
V+ L G++ A+ ++ KG P Y+ + L+ +LE A+ +F ++K
Sbjct: 597 VLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKIL 656
Query: 543 QNDYA 547
DYA
Sbjct: 657 APDYA 661
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 180/390 (46%), Gaps = 3/390 (0%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
+++ A D+ SYN ++ L + + + + M K+ + PD TL ++ SF++
Sbjct: 615 YSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQM-KKILAPDYATLCTILPSFVKN 673
Query: 212 GQVYKAIQMLGR-LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMT 269
G + +A+ + + G D S + ++ + ++ V + ++ + +L N
Sbjct: 674 GLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFF 733
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
+I K + +E ++ + G S + +++ LI GL ID A ++F MK
Sbjct: 734 LCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMK 793
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
GCGPD YN ++ +E +K K M E TY +ISGL+KS+++
Sbjct: 794 RLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLE 853
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
A++++ ++ G P+ T L+ L G A ++ + + GC+ + T Y +LL
Sbjct: 854 QAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILL 913
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
G + L+ +M E G D + Y +I LC G+L + + + G
Sbjct: 914 NGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLE 973
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P +VY+ L + L S ++E A +LF ++K
Sbjct: 974 PDLIVYNLLIDGLGKSERIEEAVSLFNEMK 1003
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 182/426 (42%), Gaps = 4/426 (0%)
Query: 115 VIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALG 174
+++ + NV + G V G L + L ++ ++ + +YN ++ L
Sbjct: 126 LMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVAL---PVMREAGMSLNAYTYNGLIYFLV 182
Query: 175 RRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
+ F V M ++G++P + T S++M +F + V + +L +E G+K +
Sbjct: 183 KSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVY 242
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
S + + L Q A + M+ +V+T+ ++I G++ + + V ++
Sbjct: 243 SYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKM 302
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
A PD +T+ L++ G +G +EV++ M G + +Y AV+ VG
Sbjct: 303 KASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRV 362
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
DE + + M P +Y LISG LK+ ALE+F M G P+ T F
Sbjct: 363 DEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLF 422
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
+ G A+ Y+ + G + A +L L+G G+ GM +++E++ G
Sbjct: 423 INYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGV 482
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
D Y +I + + A+ + + G P L + L + L K A+
Sbjct: 483 SPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQ 542
Query: 534 LFRKIK 539
LF K+K
Sbjct: 543 LFHKLK 548
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 175/377 (46%), Gaps = 11/377 (2%)
Query: 169 IVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
I+K G K +F N+ A G+ + L ++ + + +A Q+ + + G
Sbjct: 706 ILKKAGVEKSIEFAENI----ASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLG 761
Query: 229 LKFDAESLNVVLWCLCQRLHVGAASSLFNSMK----GKVLFNVMTYNIVISGWSKLGQVV 284
+ S N ++ L + A LF MK G F TYN+++ K +V
Sbjct: 762 VSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEF---TYNLILDAMGKSMRVE 818
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
EM +V KE+ +G+ +T++ +I GL ++ R++ AI+++ + +G P Y ++
Sbjct: 819 EMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLL 878
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ G + + M Y CEPN Y L++G + + ++FE+M+++GI
Sbjct: 879 DGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGIN 938
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P + T ++ LC+ G + + +++ ++G + L Y LL+ L + + L
Sbjct: 939 PDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSL 998
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
++EM++ G + Y +I L G+ A + EE LRKG+ PS Y+ L
Sbjct: 999 FNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSV 1058
Query: 525 SNKLESAYNLFRKIKIA 541
S ++AY + ++ +
Sbjct: 1059 SGSTDNAYAAYGQMIVG 1075
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 139/307 (45%), Gaps = 1/307 (0%)
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLK 291
ES N +L + VG + +F+ M+ +V+ NV T+ + G G + L
Sbjct: 101 TESCNYMLELMRAHGRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALP 160
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
+ G S ++ T++ LI L ++G +A+EV+ M E G P Y+ ++ +
Sbjct: 161 VMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKR 220
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
D D + M + +PN+ +YT I L ++ + +A + +M D G P T T
Sbjct: 221 DVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHT 280
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
++ LC G A ++ K + K Y LL + G ++++W+ M
Sbjct: 281 VIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVAD 340
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
GY + Y V+ LC +G+++ A+ V +E KG P + Y+ L + L ++ + A
Sbjct: 341 GYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRA 400
Query: 532 YNLFRKI 538
LF +
Sbjct: 401 LELFNHM 407
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 167/379 (44%), Gaps = 36/379 (9%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA LF + K V+ SYN +++ L D ++ ++M + G PD T ++
Sbjct: 749 EAHQLFNKF--KGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNL 806
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++D+ ++ +V + +++ + +H S +
Sbjct: 807 ILDAMGKSMRVEEMLKVQ-----------------------KEMHRKGYESTY------- 836
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+TYN +ISG K ++ + + +++EGFSP T+ L++GL ++G++ DA
Sbjct: 837 ----VTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAEN 892
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+F+ M E GC P+ YN +++ + G+ + + ++ M P++ +YT LI L
Sbjct: 893 LFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLC 952
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
+ ++ D L F ++ + G+ P ++ L A+ ++ + +K G +L
Sbjct: 953 TAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLY 1012
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
Y L+ L GK ++ E+ G+ Y +I G G +NA +
Sbjct: 1013 TYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQM 1072
Query: 504 LRKGFCPSRLVYSKLSNKL 522
+ G P+ Y +L N+L
Sbjct: 1073 IVGGCQPNSSTYMQLPNQL 1091
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 104/243 (42%), Gaps = 6/243 (2%)
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
++++E + GR+ D +VFD M+++ + + + G M
Sbjct: 105 NYMLELMRAHGRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMRE 164
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
N TY LI L+KS A+A+EV++ M++ GI PS T + +
Sbjct: 165 AGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDT 224
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
+ + + G K ++ +Y + +R L + + +M++SG D + +I
Sbjct: 225 VLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQ 284
Query: 486 GLCNIGQLENAVLV---MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
LC+ G+L +A V M+ S +K P R+ Y L +K S +S ++ +
Sbjct: 285 VLCDAGRLSDAKAVFWKMKASDQK---PDRVTYITLLDKCGDSGDSQSVVEVWNAMVADG 341
Query: 543 QND 545
ND
Sbjct: 342 YND 344
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 186/406 (45%), Gaps = 5/406 (1%)
Query: 142 SGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
S +AM LF +K + D SYN ++ L + K + +M P+ T
Sbjct: 145 SHKAMDLF--CMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTF 202
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-K 260
S ++D F + G V + +L +E GL+ D + ++ C + + LFN M +
Sbjct: 203 SALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLR 262
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
V NV+TY+ +++ K + E ++L + PD + ++ L +GL + GR D
Sbjct: 263 KNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASD 322
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
AI+V D M ++G P+ YNA+I+ G D+ + + M+ +P++ TY+ L+
Sbjct: 323 AIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVK 382
Query: 381 GLLKSRKVADALEVFEEMLDR--GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
GL K+ +A+++ ++ + I P ++ LC A +Y + G
Sbjct: 383 GLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGF 442
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
++ Y +L+ GK L+LW + +SG + Y +I GLC + L A
Sbjct: 443 PSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKG 502
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
+ + G P+ Y+ L L + +E A NLF++++ A +
Sbjct: 503 LFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHD 548
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 185/395 (46%), Gaps = 3/395 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
E++ F + +PN S N ++ L + K +D + +V S MA V P +LS
Sbjct: 40 ESLSHFHHTLQDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSA 99
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
+++SF+ + A +LG + G + + N++L CQ A LF MK
Sbjct: 100 LIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNC 159
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
L + ++YN VI+G K ++VE + + KE+ P+S+TFS LI+G + G +++
Sbjct: 160 LIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGF 219
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+ + M++ G D Y+A+IS + S GD + + + M N PN+ TY+ L++ L
Sbjct: 220 GLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNAL 279
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K +K +A ++ + M + P T + L G A+ + K G + +
Sbjct: 280 CKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNN 339
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y ++ L G+ L + M + G D Y ++ GLC +G+++ AV ++
Sbjct: 340 VTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNL 399
Query: 503 SLRKGFC--PSRLVYSKLSNKLLASNKLESAYNLF 535
+ K F P ++ + +L +L A ++
Sbjct: 400 LMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVY 434
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 164/331 (49%), Gaps = 3/331 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ L + D +L MAK+G PD+ T S ++ G++ +A+ +L L
Sbjct: 341 TYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLL 400
Query: 225 --EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLG 281
++F +K D + N+V+ LC++ + A ++ +M + N++TYNI+I G+ G
Sbjct: 401 MSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAG 460
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ + + K+ V G SP++ T++ LI GL + + A +F+ + G P + YN
Sbjct: 461 KLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYN 520
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++++ ++ ++ M + N +P++ ++ +I G LK+ V A E+ EML+
Sbjct: 521 TLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNM 580
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
+VP T + + G A +Y++ G + LL+ S GK +
Sbjct: 581 NLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKV 640
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+ + +M + D ++ ++A LCN+ +
Sbjct: 641 VSMLQQMADKDVVLDSKLTSTILACLCNMSK 671
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 179/394 (45%), Gaps = 41/394 (10%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FN ++ NV +V +Y+ ++ AL +++ + +L M V PD+ +++ D
Sbjct: 256 LFNEMLRK-NVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGL 314
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFN 266
+ G+ AI++L + G + + + N ++ LC+ V A + +M KGK +
Sbjct: 315 SKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKP-D 373
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGF--SPDSLTFSFLIEGLGRAGRIDDAIEV 324
V+TY+ ++ G +G++ E +L ++++ F PD F+ +I+ L + R+ A V
Sbjct: 374 VVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRV 433
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
+ TM E+G + YN +I Y+S G + ++ +K PN TYT LI+GL K
Sbjct: 434 YYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCK 493
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+ ++ A +F + G P+ + + LC ++AR
Sbjct: 494 MQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESS-------VEQAR---------- 536
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
+L+ EM+ + + D + +I G G +E+A ++ E L
Sbjct: 537 ------------------NLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEML 578
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P + +S L N+ L +L+ A +L+ ++
Sbjct: 579 NMNLVPDNITFSILINRFLKLGQLDEAASLYERM 612
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 157/368 (42%), Gaps = 43/368 (11%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L+ + KG D + + L VGK+ EA+ L K ++ DV +
Sbjct: 361 ILETMAKKGKKPDVVTYSTLVKGLCGVGKI-------DEAVDLLNLLMSKEFHIKPDVFA 413
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
+N++++ L +++ V M + G ++ T +I++D ++ AG++ KA+++
Sbjct: 414 FNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAV 473
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG------------------------ 261
D G+ +A + V++ LC+ + A LFN +
Sbjct: 474 DSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVE 533
Query: 262 --KVLF----------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
+ LF +V+++NI+I G K G V + +L E++ PD++TFS LI
Sbjct: 534 QARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILI 593
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
+ G++D+A +++ M G PD +++++ Y G ++ + + M+ +
Sbjct: 594 NRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVV 653
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
+ + +++ L K D ++ + V ++ L L P +A +++
Sbjct: 654 LDSKLTSTILACLCNMSKDVDIEKILPKFSQHTSVGASIKCNELLMKLNKVHPDNANILV 713
Query: 430 YKKARKVG 437
A G
Sbjct: 714 ANTAMGTG 721
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 170/375 (45%), Gaps = 1/375 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
++++++A K D M ++GV P +ET + ++ F++ Q + +
Sbjct: 169 FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMF 228
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVV 284
+K + N+++ LC+ + A SM+ V NV+TYN VI G+ G+V
Sbjct: 229 RLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVE 288
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
VL + G PDS T+ LI G+ + G++++A + + MKE G P YN +I
Sbjct: 289 GARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLI 348
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
Y + GD + Y M P + TY LI L K+ +A + ++M D GIV
Sbjct: 349 DGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIV 408
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P + T + C G A ++ + G + +L Y L+ LS + DL
Sbjct: 409 PDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDL 468
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+ ++ G D ++ +I G C G L+ A +++E ++ P + Y+ L
Sbjct: 469 FEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCR 528
Query: 525 SNKLESAYNLFRKIK 539
K+E A L +++K
Sbjct: 529 EGKVEEARELLKEMK 543
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 174/381 (45%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ V ++N+++ L + + + M GV P++ T + V+ + G+V A
Sbjct: 232 IKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGAR 291
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGW 277
+L +++ G++ D+ + ++ +C+ + AS + MK +L +TYN +I G+
Sbjct: 292 MVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGY 351
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
G +V+ E+V P T++ LI L G++D+A + M + G PD+
Sbjct: 352 CNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDS 411
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I+ Y G+ + + M S +P + TYT LI L K ++ A ++FE+
Sbjct: 412 ITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEK 471
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
++ G P + ++ C+ G A + K+ K Y L++ GK
Sbjct: 472 IIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGK 531
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+L EM+ G D Y +I+G G + +A + +E L GF P+ L Y+
Sbjct: 532 VEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNA 591
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L L + + + A L +++
Sbjct: 592 LIQGLCKNQQGDLAEELLKEM 612
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 165/366 (45%), Gaps = 1/366 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K V ++++N ++ + + + + ++M + + + T +I+++ + G+
Sbjct: 192 MKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGK 251
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
+ KA +G +E+ G+K + + N V+ C R V A + + MK + V + TY
Sbjct: 252 LKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGS 311
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+ISG K G++ E +L+++ G P ++T++ LI+G G + A D M +
Sbjct: 312 LISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRA 371
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P + YN +I G DE K M P+ TY LI+G + A
Sbjct: 372 ILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAF 431
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+ +EM+ +GI P+ T TS + L AA +++K + G L + L+
Sbjct: 432 NLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGH 491
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G L EM + D Y ++ G C G++E A +++E R+G P
Sbjct: 492 CANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDH 551
Query: 513 LVYSKL 518
+ Y+ L
Sbjct: 552 ISYNTL 557
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 164/373 (43%), Gaps = 7/373 (1%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F ++++ V +V +YN ++ R + VL M GV PD T ++
Sbjct: 258 FIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMC 317
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVM 268
+ G++ +A +L ++++ GL A + N ++ C + + A + M + +L V
Sbjct: 318 KGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVS 377
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TYN++I G++ E + ++K++ G PDS+T++ LI G R G A + D M
Sbjct: 378 TYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEM 437
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
KG P Y ++I ++ + P++ + LI G + +
Sbjct: 438 ISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNL 497
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A + +EM R IVP T + ++ C G A + K+ ++ G + +Y L
Sbjct: 498 DRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTL 557
Query: 449 LRRLSGFGKCGMLLDLW---HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+ SG+ K G + D + EM G+ Y +I GLC Q + A +++E +
Sbjct: 558 I---SGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVS 614
Query: 506 KGFCPSRLVYSKL 518
KG P Y L
Sbjct: 615 KGITPDDSTYFSL 627
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 171/384 (44%), Gaps = 7/384 (1%)
Query: 114 GVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKAL 173
G +E+ NV V+ +RG + G MVL +K+ V D +Y ++ +
Sbjct: 260 GSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDI---MKNRGVEPDSYTYGSLISGM 316
Query: 174 GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA 233
+ + +L M + G+ P T + ++D + G + KA + +
Sbjct: 317 CKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTV 376
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
+ N+++ L + A + M ++ + +TYNI+I+G+ + G + + E
Sbjct: 377 STYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDE 436
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
++++G P +T++ LI L + R+ A ++F+ + +G PD +NA+I + + G+
Sbjct: 437 MISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGN 496
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
D K M N P+ TY L+ G + KV +A E+ +EM RGI P + +
Sbjct: 497 LDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNT 556
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
+ G + A + + +G +L Y L++ L + + +L EM G
Sbjct: 557 LISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKG 616
Query: 473 YPSDGEIYEYVIAGLCNIGQLENA 496
D Y +I G IG+++++
Sbjct: 617 ITPDDSTYFSLIEG---IGKVDDS 637
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%)
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
S+ F LI R DDA E FD MKEKG P +NA++S ++ + + Y
Sbjct: 166 SIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYA 225
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M + + T+ +I+ L K K+ A + M + G+ P+ T + + CS G
Sbjct: 226 EMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRG 285
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
A M+ + G + Y L+ + GK + +M+E G Y
Sbjct: 286 RVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYN 345
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+I G CN G L A +E +R+ P+ Y+ L + L K++ A + + +
Sbjct: 346 TLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDM 402
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 180/389 (46%), Gaps = 29/389 (7%)
Query: 173 LGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
LGR K +LS M EG P + ++ ++ R+G A ++L ++ G +
Sbjct: 93 LGRCK------RILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPG 146
Query: 233 AESLNVVLWCLCQRLHVGA-ASSLFNSMKGKVLFNVMTYNIV-ISGWSK----LGQVVEM 286
N+++ +C G L G++L + N V IS +S+ +G+ +
Sbjct: 147 YVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKA 206
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
V++E++++GF PD+ T+S +I L A +++ A ++F MK G PD Y +I +
Sbjct: 207 YNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDS 266
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
+ G ++ ++ M C PN+ TYT LI LKSRKV+ A EV+E ML +G P+
Sbjct: 267 FCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPN 326
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL-----------------SLTAYKLLL 449
T T+ ++ LC G A +YK +K ++ ++ Y L+
Sbjct: 327 IVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALV 386
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
L + DL M G + +Y+ +I G C G+L+ A V L G+
Sbjct: 387 DGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYD 446
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ YS L ++L +L+ A + K+
Sbjct: 447 PNVYTYSSLIDRLFKDKRLDLALKVLSKM 475
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 192/438 (43%), Gaps = 29/438 (6%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
V+G + N + +A LF +K +A DV Y ++ + + F + N +M
Sbjct: 228 VIGYLCNASKVE-KAFQLF--QEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEME 284
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
++G P++ T + ++ +++++ +V KA ++ + G + + ++ LC+ +
Sbjct: 285 RDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIE 344
Query: 251 AASSLFNSMKGKVL------------------FNVMTYNIVISGWSKLGQVVEMERVLKE 292
AS ++ MK + + NV TY ++ G K QV E +LK
Sbjct: 345 KASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKS 404
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+ EG P+ + + LI+G +AG++D+A EVF TM E G P+ Y+++I
Sbjct: 405 MSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKR 464
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
D +K M +C PN+ YT +I GL K K +A ++ M ++G P+ T T+
Sbjct: 465 LDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTA 524
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
++ G + + ++ GC + Y++L+ G L EM+++
Sbjct: 525 MIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTY 584
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
+P Y VI G N + + L E S P VY L + + + +LE A
Sbjct: 585 WPRHVAGYRKVIEGF-NREFIASLYLSFEISENDSV-PVAPVYRVLIDNFIKAGRLEIAL 642
Query: 533 NL------FRKIKIARQN 544
L F A QN
Sbjct: 643 ELNEELSSFSPFSAANQN 660
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 113/248 (45%), Gaps = 8/248 (3%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
G+ D T L ++G+ +A+ + + KE+ PDT Y +IS F+E
Sbjct: 5 GYRMDEFTLGCFAHSLCKSGKWREALSLLE--KEEFV-PDTVLYTKMISGLCEASLFEEA 61
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
M + M + +C PN+ TY L+ G L K+ + M+ G PS S +
Sbjct: 62 MDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHA 121
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM-LLDL----WHEMQES 471
C G A + KK + GC+ Y +L+ + + G +LDL + EM E+
Sbjct: 122 YCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEA 181
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G + LC IG+ E A V+ E + KGF P YSK+ L ++K+E A
Sbjct: 182 GVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKA 241
Query: 532 YNLFRKIK 539
+ LF+++K
Sbjct: 242 FQLFQEMK 249
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 151/360 (41%), Gaps = 15/360 (4%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M+ G D TL S ++G+ +A+ +L + E+F D ++ LC+
Sbjct: 1 MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEK-EEF--VPDTVLYTKMISGLCEASL 57
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
A M+ L NV+TY I++ G ++ +R+L ++ EG P F+
Sbjct: 58 FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD-----FDECMKYYKG 362
L+ R+G A ++ M + GC P YN +I S + D K Y
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGE 177
Query: 363 MSSYNC---EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
M + N+ ++R + G+ K K A V EM+ +G +P T T + + LC+
Sbjct: 178 MLEAGVVLNKVNISNFSRCLCGIGKFEK---AYNVIREMMSKGFIPDTSTYSKVIGYLCN 234
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
A ++++ ++ G + Y L+ G + + EM+ G +
Sbjct: 235 ASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVT 294
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y +I ++ A V E L KG P+ + Y+ L + L + K+E A +++ +K
Sbjct: 295 YTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMK 354
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 155/337 (45%), Gaps = 3/337 (0%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVL--WCLCQRLHVG 250
G PD+ +++M + ++ +A + G + GL+ S N ++ +C L G
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279
Query: 251 AASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
F M+ +V +V TY+++I+G K GQ+ + ++ E+ G P+ +TF+ LI
Sbjct: 280 FRLKRF-MMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLIN 338
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
G GR D +E++ M KG PD YN +I+ VGD E K M+ +P
Sbjct: 339 GHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKP 398
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
+ TYT LI G K + ALE+ +EM+ GI T+ + C G A
Sbjct: 399 DKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTL 458
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
++ + G K Y +++ G L EMQ G+ Y ++ GLC
Sbjct: 459 REMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQ 518
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
GQ++NA ++++ L G P + Y+ L + L + K
Sbjct: 519 GQMKNANMLLDAMLNLGVVPDDITYNILLERTLQAWK 555
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 173/370 (46%), Gaps = 7/370 (1%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
++V++ A +F + K + + + D ++ A +
Sbjct: 158 FSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEIL 217
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVV 284
D G D NV++ LC+ + A LF + + L V+++N +I+G+ K G +
Sbjct: 218 DCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLD 277
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ R+ + ++ PD T+S LI GL + G++DDA ++F M ++G P+ + +I
Sbjct: 278 QGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLI 337
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ + G D M+ Y+ M +P++ TY LI+GL K + +A ++ EM RG+
Sbjct: 338 NGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLK 397
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD- 463
P T T ++ C G +A+ + K+ K G +L A+ L+ SGF + G +++
Sbjct: 398 PDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALI---SGFCREGQVIEA 454
Query: 464 --LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
EM E+G D Y VI G C G ++ +++E G P + Y+ L N
Sbjct: 455 ERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNG 514
Query: 522 LLASNKLESA 531
L ++++A
Sbjct: 515 LCKQGQMKNA 524
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 172/420 (40%), Gaps = 51/420 (12%)
Query: 136 VNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVL--------- 186
+N +LS +++ FF W + + SY + L K ++L
Sbjct: 76 LNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGK 135
Query: 187 --------SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNV 238
S + G + S++M+++ +G AIQ + L+ S
Sbjct: 136 NSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSC-- 193
Query: 239 VLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
G + +M N+ W+ +EI+ G+
Sbjct: 194 ----------------------GYLFDRLMKLNLTSPAWA----------FYEEILDCGY 221
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
PD F+ L+ L + +I++A +F + ++G P ++N +I+ Y G+ D+ +
Sbjct: 222 PPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFR 281
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
+ M P++ TY+ LI+GL K ++ DA ++F EM DRG+VP+ T T+ + C
Sbjct: 282 LKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHC 341
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
G M +Y++ + G K + Y L+ L G L EM + G D
Sbjct: 342 VTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKF 401
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y +I G C G LE+A+ + +E +++G + ++ L + ++ A R++
Sbjct: 402 TYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREM 461
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 182/381 (47%), Gaps = 7/381 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V +YN ++ + + ++ ++M G+ PD T ++++D ++++ + KA ++L
Sbjct: 380 NVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELL 439
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
++ L + +V++ LC + A+ + + M + V NV Y +I + +
Sbjct: 440 AEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQE 499
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ +LK ++A G PD ++ LI GL RA ++++A + M EKG P+ + Y
Sbjct: 500 SRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTY 559
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
A I+ Y G+ +Y+K M S PN YT LI G +AL F+ ML+
Sbjct: 560 GAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLE 619
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G++P ++ + L G AM ++ K K G + Y L +SGF K G
Sbjct: 620 KGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSL---ISGFCKEGD 676
Query: 461 L---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+ L+ EM +G + +Y +I GLC +G++ A + +E K P + YS
Sbjct: 677 IEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYST 736
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ + S L A+ LF ++
Sbjct: 737 IIDGYCKSGNLTEAFKLFDEM 757
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 188/417 (45%), Gaps = 36/417 (8%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D +Y ++V ++K + M G+NP+ T + ++D FI+ G + +A+
Sbjct: 307 LGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEAL 366
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ + GLK + + N ++ + + + A SLFN M + + TYN++I G+
Sbjct: 367 RIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGY 426
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K + + +L E+ A +P T+S LI GL + + A EV D M G P+
Sbjct: 427 LKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNV 486
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA------ 391
Y +I Y+ ++ ++ K M + P++ Y LI GL +++KV +A
Sbjct: 487 FMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVD 546
Query: 392 -------------------------LEV----FEEMLDRGIVPSTGTITSFLEPLCSYGP 422
++V F++ML GIVP+ T ++ C G
Sbjct: 547 MGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGN 606
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A+ +K + G + AY ++ LS GK + ++ + ++G D +Y
Sbjct: 607 TVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNS 666
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I+G C G +E A + +E L G P+ +VY+ L N L ++ A LF +I+
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIE 723
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 165/342 (48%), Gaps = 2/342 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+++Y+ I+ +L + V K GV PD+ + ++ F + G + KA Q+
Sbjct: 625 DIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLY 684
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
+ G+ + N ++ LC+ V A LF+ ++ K L +V+TY+ +I G+ K
Sbjct: 685 DEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKS 744
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + E ++ E++++G SPD + LI+G G+ G ++ A+ +F ++K G +A+
Sbjct: 745 GNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAF 803
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N++I ++ G E + + M PN+ TYT LI K+ + +A ++F +M
Sbjct: 804 NSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMET 863
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
R I+P+T T TS L G + ++K G AY ++ GK
Sbjct: 864 RNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLE 923
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
L L ++ G + ++++ +I LC Q+ + ++ E
Sbjct: 924 ALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSE 965
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 159/346 (45%), Gaps = 7/346 (2%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y+V++ L VL M + GV P++ ++ ++++ + AI++L +
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
G+ D N ++ LC+ V A L M K + N TY I+ +SK G++
Sbjct: 513 IANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEI 572
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
ER K++++ G P+++ ++ LI+G G +A+ F M EKG PD AY+A+
Sbjct: 573 QVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAI 632
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I + G E M + P++ Y LISG K + A ++++EML GI
Sbjct: 633 IHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGI 692
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ + + LC G A ++ + + + Y + + G+ K G L +
Sbjct: 693 NPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTI---IDGYCKSGNLTE 749
Query: 464 ---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+ EM G DG IY +I G G LE A+ + E+ +K
Sbjct: 750 AFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQK 795
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 160/382 (41%), Gaps = 35/382 (9%)
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
EG P L + +M ++A + ++ G + + + D + V+ C+ V
Sbjct: 201 EGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIK 260
Query: 252 ASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
+ + M+ + N+ TYN I G + G V E V K ++ +G PD T++ L++G
Sbjct: 261 GKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDG 320
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK------------- 358
+ R +A +F++M G P+ Y A+I +I G+ +E ++
Sbjct: 321 FCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLN 380
Query: 359 ----------------YYKGMSSYN------CEPNMDTYTRLISGLLKSRKVADALEVFE 396
K MS +N EP+ TY LI G LKS +A A E+
Sbjct: 381 VVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLA 440
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
EM R + PS T + + LC A + + + G K ++ Y L++
Sbjct: 441 EMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQES 500
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ M ++L M +G D Y +I GLC ++E A +++ + KG P+ Y
Sbjct: 501 RYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYG 560
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
N S +++ A F+ +
Sbjct: 561 AFINLYSKSGEIQVAERYFKDM 582
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 124/288 (43%), Gaps = 8/288 (2%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N+ ++I I + LG + E V ++EGF P + + L+ L +A + +V+
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+M E PD Y VI + VGD + M C+PN+ TY I GL ++
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQT 289
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
V +ALEV + M+++G+ P T T ++ C A ++++ G + Y
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ G L + EM G + Y +I G+ G++ A+ + E L
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYARRLWRS 553
G P Y+ L + L S+ + A L ++K AR+L S
Sbjct: 410 AGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMK-------ARKLTPS 450
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 150/322 (46%), Gaps = 24/322 (7%)
Query: 104 GVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDV 163
GVFL+ LK GV+ D ++ G + L E + H + ++
Sbjct: 647 GVFLKFLK-TGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML---------HNGINPNI 696
Query: 164 KSYNVIVKALGR-------RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
YN ++ L + R+ FD ++ ++ + PD+ T S ++D + ++G + +
Sbjct: 697 VVYNTLINGLCKLGEVTKARELFD-------EIEEKDLVPDVVTYSTIIDGYCKSGNLTE 749
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISG 276
A ++ + G+ D +++ + ++ A SLF+ + K + ++ +N +I
Sbjct: 750 AFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDS 809
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K G+V+E + ++V + +P+ +T++ LI+ G+A +++A ++F M+ + P+
Sbjct: 810 FCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPN 869
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
T Y +++ +Y +G+ + + +K M + + Y + S K K +AL++
Sbjct: 870 TLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLN 929
Query: 397 EMLDRGIVPSTGTITSFLEPLC 418
+ L GI + + LC
Sbjct: 930 KSLVEGIKLEDDVFDALIFHLC 951
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 6/214 (2%)
Query: 322 IEVFDTM----KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
+E+ D++ +E G G + ++ I + +G +E + S P +
Sbjct: 154 LEILDSLVRCYREFG-GSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNN 212
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
L+ LLK+ + +V+ M++ IVP T T+ ++ C G M+ + K
Sbjct: 213 LMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-E 271
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
CK +L Y + L G L++ M E G DG Y ++ G C + + A
Sbjct: 272 CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAK 331
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
L+ E G P+R Y+ L + + +E A
Sbjct: 332 LIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEA 365
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 181/370 (48%), Gaps = 6/370 (1%)
Query: 129 LDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSD 188
L + V+ + N A+ +F P+ V+ YN ++ RR F+ + +L
Sbjct: 223 LSTILSVLGKANQEALAVEVFMR---AEPSAGNTVQVYNAMMGVYARRGRFNKVQELLDL 279
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYK--AIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
M + G PDL + + ++++ ++AG + AI++L + GL+ D + N ++ +
Sbjct: 280 MRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRA 339
Query: 247 LHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
++ A+ +F+ M+ ++ TYN +IS + + G + E++ ++ + GF PD++++
Sbjct: 340 SNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSY 399
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ L+ R G ++ E+++ M + G G D YN +I Y G + ++ Y+ M S
Sbjct: 400 NSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQS 459
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
P+ TYT LI L K+ K+A+A V EML+ G+ P+ T ++ + G P
Sbjct: 460 SGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVE 519
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A + + G + AY ++L F + + L+ EM G D +YE ++
Sbjct: 520 AEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLR 579
Query: 486 GLCNIGQLEN 495
L + ++E+
Sbjct: 580 TLRKVNKVED 589
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 148/347 (42%), Gaps = 4/347 (1%)
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
+P+ LS ++ +A Q A+++ R E + N ++ +R
Sbjct: 217 SPNARMLSTILSVLGKANQEALAVEVFMRAEPSAGN-TVQVYNAMMGVYARRGRFNKVQE 275
Query: 255 LFNSMKGK-VLFNVMTYNIVISGWSKLGQVVE--MERVLKEIVAEGFSPDSLTFSFLIEG 311
L + M+ + +++++N +I+ K G ++ +L E+ G PD++T++ LI
Sbjct: 276 LLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISA 335
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
RA +++A +VFD M+ C PD YNA+IS Y G + + + + S P+
Sbjct: 336 CSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPD 395
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+Y L+ + V E++EEM+ G T + + G A+ +Y+
Sbjct: 396 AVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYR 455
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ G Y +L+ L K + EM +G + Y +I G G
Sbjct: 456 DMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAG 515
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ A + LR G P L YS + + L N+ + A L++++
Sbjct: 516 KPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEM 562
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 161/396 (40%), Gaps = 37/396 (9%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D K +N +++A ++ + + M ++G +P ++T++ ++ + I G++ +
Sbjct: 809 ITVDRKVWNALIEAYAASGCYERARAIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELY 868
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMT-YNIVISGW 277
++ L+D G K S+ ++L + ++ +++ MK F M Y ++
Sbjct: 869 VVVQELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLL 928
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
S+ QV ++E +L E+ GF PD ++ +++ I+V+ +KE G PD
Sbjct: 929 SRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDE 988
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+ YN +I Y +E M EP +DTY L++ K + V A E+FEE
Sbjct: 989 DTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEE 1048
Query: 398 -----------------------------------MLDRGIVPSTGTITSFLEPLCSYGP 422
M D G+ P+ T+ + S G
Sbjct: 1049 LQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQ 1108
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
P A + ++ G LS Y ++ G + + +M++ G D I+
Sbjct: 1109 PQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIGIQKLIQMKKEGLEPDHRIWTC 1168
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGF-CPSRLVYSK 517
I + A++++ GF P RL+ K
Sbjct: 1169 FIRAASLSRRTSEAIVLLNALQDAGFDLPIRLLTEK 1204
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 114/255 (44%), Gaps = 9/255 (3%)
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
+SP++ S ++ LG+A + A+EVF E G YNA++ Y G F++
Sbjct: 216 YSPNARMLSTILSVLGKANQEALAVEVF-MRAEPSAGNTVQVYNAMMGVYARRGRFNKVQ 274
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD--ALEVFEEMLDRGIVPSTGTITSFLE 415
+ M C+P++ ++ LI+ LK+ + A+E+ E+ G+ P T T + +
Sbjct: 275 ELLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLIS 334
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM---LLDLWHEMQESG 472
A ++ C+ L Y ++ S +G+CG+ L+++++ G
Sbjct: 335 ACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMI---SVYGRCGLSGKAEQLFNDLESRG 391
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
+ D Y ++ G +E + EE ++ GF + Y+ + + + E A
Sbjct: 392 FFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELAL 451
Query: 533 NLFRKIKIARQNDYA 547
L+R ++ + +N A
Sbjct: 452 QLYRDMQSSGRNPDA 466
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 119/290 (41%), Gaps = 36/290 (12%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y V+ + L R K + +LS+M + G PDL + V+ ++ K IQ+ R++
Sbjct: 921 YRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIK 980
Query: 226 DFGLKFDAESLN--VVLWCLCQR-------LH--------------------------VG 250
+ GL+ D ++ N +V++C R +H V
Sbjct: 981 EDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVE 1040
Query: 251 AASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A LF ++ K + Y+ ++ + G + ER+ + G P T L+
Sbjct: 1041 QAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLM 1100
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
G +G+ +A +V +KE G T Y++VI Y+ GD++ ++ M E
Sbjct: 1101 VSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIGIQKLIQMKKEGLE 1160
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
P+ +T I SR+ ++A+ + + D G +T E L S
Sbjct: 1161 PDHRIWTCFIRAASLSRRTSEAIVLLNALQDAGFDLPIRLLTEKPESLVS 1210
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 42/232 (18%), Positives = 87/232 (37%), Gaps = 35/232 (15%)
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
+IE GR A V ++++ D +NA+I Y + G ++
Sbjct: 784 VIEAYGRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYAASGCYER------------ 831
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
A +F M+ G P+ TI L+ L G
Sbjct: 832 -----------------------ARAIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELY 868
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++ ++ + +G K+S ++ L+L + G + ++H M+ +GY +Y + L
Sbjct: 869 VVVQELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLL 928
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Q+ + ++ E GF P +++ + +A ++++IK
Sbjct: 929 SRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIK 980
>gi|449445529|ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Cucumis sativus]
gi|449523383|ref|XP_004168703.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Cucumis sativus]
Length = 803
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 203/448 (45%), Gaps = 24/448 (5%)
Query: 119 ALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKF 178
L + ++ +S ++ ++++ +L+ + FF W PN +Y+ I L R +
Sbjct: 46 TLQHHSLPISHPLLLQILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGY 105
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNV 238
+ +L M ++GV+ D T +++D+FIR+G+ A+++L +ED G + + N
Sbjct: 106 LHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYNS 165
Query: 239 VLWCLCQRLHVGAASSLFNSM------KGKV---------LFNVMTYNIVISGWSKLGQV 283
VL L ++ VG A S+F + G+V L N + N ++ KL
Sbjct: 166 VLVALLRKNQVGLALSIFFKLLDGFNNGGQVDSAATTFHFLPNSLACNELLVALRKLDMR 225
Query: 284 VEMERVLKEIVA-EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC-----GPDT 337
VE ++V ++ A E F ++ I G G +D A+ +F MKEK PD
Sbjct: 226 VEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESFSPDL 285
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN++I VG + + ++ + EP+ TY +I G KS ++ DA +F E
Sbjct: 286 CTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNE 345
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M G++P T S L L A ++ K + + S Y +L+ L G+
Sbjct: 346 MEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGR 405
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L+ ++++ G D Y +I LC LE A+ ++EE +GF + +
Sbjct: 406 AEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITS 465
Query: 518 LSNKLLASNKLESAYNLFRKIKIARQND 545
L L+A +K L R +K R+ D
Sbjct: 466 L---LIAMHKQGQWDGLERLMKHIREGD 490
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 1/183 (0%)
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
D+ ++ + F+ G++ A ++ D G+ + N +L ++ + A +F
Sbjct: 597 DINMVNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIF 656
Query: 257 NSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
N M V ++ TYN++I G K+G+ VL++++ +G D + ++ LI LG+A
Sbjct: 657 NEMGENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKA 716
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
GR+DD ++F M+ G PD +N +I + G + K+ K M C PN T
Sbjct: 717 GRMDDVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTD 776
Query: 376 TRL 378
T L
Sbjct: 777 TTL 779
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TYN ++S + K G + + E+ D T++ +I+GLG+ GR D A V + +
Sbjct: 635 TYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATYNVIIQGLGKMGRADLASSVLEKL 694
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
E+G D YN +I+ G D+ K + M + P++ T+ LI K+ ++
Sbjct: 695 MEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRL 754
Query: 389 ADALEVFEEMLDRGIVPSTGTITSF 413
DA + + MLD G P+ T T+
Sbjct: 755 KDAYKFLKMMLDSGCSPNHVTDTTL 779
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/417 (19%), Positives = 172/417 (41%), Gaps = 44/417 (10%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +Y +I++ + D + ++M G+ PD + +++ +A +V +A Q+
Sbjct: 319 DAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLF 378
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++ ++ + N+++ L + A +LF +K K + + +TY+I+I K
Sbjct: 379 DKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKE 438
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ E ++++E+ A GF D +T + L+ + + G+ D + ++E P+ +
Sbjct: 439 RLLEEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNVLKW 498
Query: 341 NAVISNYISVG-----DFDECMKYYKGMSSY-------------------NCEPNMDT-- 374
+ I DF + +S E +MD+
Sbjct: 499 KINMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASSAAKVNIDNSFENTEERDMDSWS 558
Query: 375 ---YTRLISGLLKSRKVADALEVFEEMLDRGIVP------STGTITSFLEPLCSYGPPHA 425
Y ++ L S +D L+ F R I + +FL + G +
Sbjct: 559 SSPYVNRLANLANS--TSDILQPFSIRQGRRIQEKQDNSFDINMVNTFLSIFLAKGKLNL 616
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW---HEMQESGYPSDGEIYEY 482
A +++ +G Y +L S F K G W +EM E+ P+D Y
Sbjct: 617 ACKLFEIFSDMGVNPVKYTYNSML---SSFVKKGYFHQAWGIFNEMGENVCPADIATYNV 673
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I GL +G+ + A V+E+ + +G ++Y+ L N L + +++ LF +++
Sbjct: 674 IIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMR 730
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 82/424 (19%), Positives = 166/424 (39%), Gaps = 35/424 (8%)
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
+ FN +++ + D YN ++ L + + C + M +E V T +I++D
Sbjct: 340 TMIFN-EMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILID 398
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLF 265
R G+ + L+ G DA + ++++ LC+ + A L M+ + +
Sbjct: 399 GLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVV 458
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT------------------FSF 307
+++T ++ K GQ +ER++K I P+ L FS
Sbjct: 459 DLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNVLKWKINMEYSIKYQKNKRKDFSS 518
Query: 308 LI---EGLGR--AGRIDDAIEV-----FDTMKEKGCGP-DTNAYNAVISNYI-SVGDFDE 355
L E L + R A +V F+ +E+ ++ Y ++N S D +
Sbjct: 519 LFSPKEDLSEVISSRASSAAKVNIDNSFENTEERDMDSWSSSPYVNRLANLANSTSDILQ 578
Query: 356 CMKYYKGMSSYNCEPN---MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
+G + N ++ +S L K+ A ++FE D G+ P T S
Sbjct: 579 PFSIRQGRRIQEKQDNSFDINMVNTFLSIFLAKGKLNLACKLFEIFSDMGVNPVKYTYNS 638
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
L G H A ++ + + C + Y ++++ L G+ + + ++ E G
Sbjct: 639 MLSSFVKKGYFHQAWGIFNEMGENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQG 698
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
D +Y +I L G++++ + + G P + ++ L + +L+ AY
Sbjct: 699 GYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAY 758
Query: 533 NLFR 536
+
Sbjct: 759 KFLK 762
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 84/403 (20%), Positives = 156/403 (38%), Gaps = 48/403 (11%)
Query: 159 VAKDVK----SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV 214
V +DV+ +YN+++ L R + + D+ K+G D T SI++ + +
Sbjct: 382 VQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLL 441
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVL--------WCLCQRL--HVGAASSLFNSMKGKVL 264
+A+Q++ +E G D ++ +L W +RL H+ + N +K K+
Sbjct: 442 EEALQLVEEMEARGFVVDLITITSLLIAMHKQGQWDGLERLMKHIREGDLVPNVLKWKI- 500
Query: 265 FNVMTYNI----------------------VISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
M Y+I VIS + V ++ + E DS
Sbjct: 501 --NMEYSIKYQKNKRKDFSSLFSPKEDLSEVISSRASSAAKVNIDNSFEN--TEERDMDS 556
Query: 303 LTFSFLIEGLGR-AGRIDDAIEVFDT-----MKEKGCGP-DTNAYNAVISNYISVGDFDE 355
+ S + L A D ++ F ++EK D N N +S +++ G +
Sbjct: 557 WSSSPYVNRLANLANSTSDILQPFSIRQGRRIQEKQDNSFDINMVNTFLSIFLAKGKLNL 616
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
K ++ S P TY ++S +K A +F EM + T ++
Sbjct: 617 ACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATYNVIIQ 676
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
L G A + +K + G L + Y L+ L G+ + L+ +M+ SG
Sbjct: 677 GLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINP 736
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
D + +I G+L++A ++ L G P+ + + L
Sbjct: 737 DVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTL 779
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 183/366 (50%), Gaps = 1/366 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ + + D +YN+++ +L R D VL+ + + P + T +I++++ + G
Sbjct: 184 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGG 243
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
V +A++++ + GLK D + N ++ +C+ V A + +++ K +V++YNI
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNI 303
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
++ G+ E E+++ ++ +E P+ +T+S LI L R G+I++A+ + MKEKG
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD +Y+ +I+ + G D +++ + M S C P++ Y +++ L K+ K AL
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
E+F ++ + G P++ + + L S G A+ M + G Y ++ L
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G +L +M+ + Y V+ G C ++E+A+ V+E + G P+
Sbjct: 484 CREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNE 543
Query: 513 LVYSKL 518
Y+ L
Sbjct: 544 TTYTVL 549
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 163/345 (47%), Gaps = 1/345 (0%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
PD+ + +++ F + ++ A ++L R+ D + N+++ LC R + A +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 256 FNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
N + V+TY I+I G V E +++ E+++ G PD T++ +I G+ +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G +D A E+ ++ KG PD +YN ++ ++ G ++E K M S C+PN+ T
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y+ LI+ L + K+ +A+ + + M ++G+ P + + C G A+ +
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
GC + Y +L L GK L+++ ++ E G + Y + + L + G
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
A+ ++ E + G P + Y+ + + L ++ A+ L ++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR 500
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 168/378 (44%), Gaps = 1/378 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN ++ + D VL M + +PD T +I++ S G++ A+++L
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
+L + + +++ V A L + M + L ++ TYN +I G K
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G V +++ + +G PD ++++ L+ L G+ ++ ++ M + C P+ Y
Sbjct: 277 GMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +I+ G +E M K M P+ +Y LI+ + ++ A+E E M+
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G +P + L LC G A+ ++ K +VGC + ++Y + L G
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L + EM +G D Y +I+ LC G ++ A ++ + F PS + Y+ +
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Query: 521 KLLASNKLESAYNLFRKI 538
++++E A N+ +
Sbjct: 517 GFCKAHRIEDAINVLESM 534
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 133/308 (43%), Gaps = 36/308 (11%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V+ +I G+ L + + RV+ EI+ + PD ++ LI G + RIDDA V
Sbjct: 123 DVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALINGFCKMNRIDDATRVL 181
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M+ K PDT YN +I + S G D +K + S NC+P + TYT LI +
Sbjct: 182 DRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLE 241
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG-------- 437
V +AL++ +EML RG+ P T + + +C G A M + G
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISY 301
Query: 438 ---------------------------CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
C ++ Y +L+ L GK ++L M+E
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G D Y+ +IA C G+L+ A+ +E + G P + Y+ + L + K +
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 421
Query: 531 AYNLFRKI 538
A +F K+
Sbjct: 422 ALEIFGKL 429
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 128/255 (50%), Gaps = 1/255 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV SYN++++AL + ++ +++ M E +P++ T SI++ + R G++ +A+ +L
Sbjct: 297 DVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLL 356
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+++ GL DA S + ++ C+ + A +M L +++ YN V++ K
Sbjct: 357 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN 416
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ + + ++ G SP+S +++ + L +G A+ + M G PD Y
Sbjct: 417 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITY 476
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N++IS G DE + M S P++ TY ++ G K+ ++ DA+ V E M+
Sbjct: 477 NSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG 536
Query: 401 RGIVPSTGTITSFLE 415
G P+ T T +E
Sbjct: 537 NGCRPNETTYTVLIE 551
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 120/246 (48%), Gaps = 9/246 (3%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV +Y++++ L R + N+L M ++G+ PD + ++ +F R G++
Sbjct: 331 PNVV----TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--NVMTYNIVI 274
AI+ L + G D + N VL LC+ A +F + G+V N +YN +
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL-GEVGCSPNSSSYNTMF 445
Query: 275 SG-WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
S WS ++ + +L E+++ G PD +T++ +I L R G +D+A E+ M+
Sbjct: 446 SALWSSGDKIRALHMIL-EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF 504
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
P YN V+ + ++ + + M C PN TYT LI G+ + A+A+E
Sbjct: 505 HPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAME 564
Query: 394 VFEEML 399
+ +++
Sbjct: 565 LANDLV 570
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 1/225 (0%)
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
R+G +++ + +TM KG PD +I + ++ + + ++ + + + +P++
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
Y LI+G K ++ DA V + M + P T T + LCS G A+ + +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
C+ ++ Y +L+ G L L EM G D Y +I G+C G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ A ++ KG P + Y+ L LL K E L K+
Sbjct: 280 DRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 166/380 (43%), Gaps = 29/380 (7%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ DV +Y+ I+ AL + + D VL+ M K GV P+ T + +M + +GQ +AI
Sbjct: 227 ISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAI 286
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
L ++ G++ D ++ +C ++ G++
Sbjct: 287 GFLKKVRSDGVEPDGLEPDIATYC-----------------------------TLLQGYA 317
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
G +V M +L +V G PD ++ LI + G++D+A+ VF M+++G PD
Sbjct: 318 TKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAV 377
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
Y AVI G ++ M Y++ M P Y LI GL K A E+ EM
Sbjct: 378 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 437
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
LDRGI +T S ++ C G + ++ ++G K + Y L+ GK
Sbjct: 438 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 497
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+ L M G + Y +I G C I ++ +A+++ +E G P + Y+ +
Sbjct: 498 DEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNII 557
Query: 519 SNKLLASNKLESAYNLFRKI 538
L + + +A L+ +I
Sbjct: 558 LQGLFQTRRTAAAKELYVRI 577
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 177/390 (45%), Gaps = 5/390 (1%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
FL+K++ GV D L ++ ++ +G L G M + +++ + D
Sbjct: 288 FLKKVRSDGVEPDGL-EPDIATYCTLLQGYATKGALVG--MHALLDLMVRN-GIHPDHYV 343
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN+++ A ++ D V S M ++G+NPD T V+ ++G+V A+ ++
Sbjct: 344 YNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMI 403
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
D GL N ++ LC A L M + + N + +N +I K G+V+
Sbjct: 404 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 463
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E E++ +V G PD +T+S LI+G AG++D+A+++ M G P+T Y +I
Sbjct: 464 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLI 523
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ Y + + + +K M S P++ TY ++ GL ++R+ A A E++ + + G
Sbjct: 524 NGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 583
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
T L LC A+ M++ + KL + +++ L G+ G DL
Sbjct: 584 IELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDL 643
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
+ +G + Y + + G LE
Sbjct: 644 FVAFSSNGLVPNYWTYRLMAENIIGQGLLE 673
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 151/344 (43%), Gaps = 47/344 (13%)
Query: 238 VVLWCLCQ--RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE-MERVLKEIV 294
+++ C C+ RL +G A+ L N +K +T+ ++ G + + M+ VL+ +
Sbjct: 92 ILIGCCCRADRLDLGFAA-LGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK---GCGPDTNAYNAVISNYISVG 351
PD + + L++GL R +A+E+ M + G PD +Y VI+ + G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEG 210
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
D + Y M P++ TY+ +I+ L K + + A+EV M+ G++P+ T T
Sbjct: 211 DSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYT 270
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGC-----KLSLTAYKLLLRRLSGFGK-CGM--LLD 463
S + CS G P A+ KK R G + + Y LL+ + G GM LLD
Sbjct: 271 SIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLD 330
Query: 464 L--------------------------------WHEMQESGYPSDGEIYEYVIAGLCNIG 491
L + +M++ G D Y VI LC G
Sbjct: 331 LMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSG 390
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
++E+A+L E+ + +G P +VY+ L + L NK E A L
Sbjct: 391 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELI 434
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ +M GV+PD+ T +I++ + + A ++ R+ + G + + + N++L LC
Sbjct: 538 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 597
Query: 245 QRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ A +F ++ L T+NI+I K+G+ E + + + G P+
Sbjct: 598 KNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYW 657
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
T+ + E + G +++ ++F +M++ GC D+ N ++ + G+ Y
Sbjct: 658 TYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTY 713
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 73/170 (42%), Gaps = 4/170 (2%)
Query: 374 TYTRLISGLLKSRKVADALE-VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM---MM 429
T+T L+ GL ++ +DA++ V M + +P + T L+ LC A+ M
Sbjct: 124 TFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHM 183
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
R G + +Y ++ G G +HEM + D Y +IA LC
Sbjct: 184 MADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCK 243
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ A+ V+ ++ G P+ Y+ + + +S + + A +K++
Sbjct: 244 GQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVR 293
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 3/190 (1%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
G+A+VLF ++ V+ D+ +YN+I++ L + + + + + G +L T +
Sbjct: 533 GDALVLF--KEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 590
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK 262
I++ + A++M L LK +A + N+++ L + G A LF +
Sbjct: 591 IILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSN 650
Query: 263 VLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
L N TY ++ G + E++++ + G + DS +F++ L + G I A
Sbjct: 651 GLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 710
Query: 322 IEVFDTMKEK 331
+ EK
Sbjct: 711 GTYLSMIDEK 720
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 171/375 (45%), Gaps = 1/375 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV SY ++ L R D + +M +G++P+ T + ++ + +G+ +AI +
Sbjct: 205 DVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIF 264
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
++ G++ D + N ++ LC+ A +F+SM K + Y ++ G++
Sbjct: 265 RKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATE 324
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G +V+M ++L +V G PD F+ LI + G +D+A+ F M+++G P+ Y
Sbjct: 325 GYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTY 384
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
V+ VG D+ M + + S PN + LI GL K A E+ EM+
Sbjct: 385 GTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIG 444
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
RGI P+T + L LC G A ++ +V + + Y L+ GK
Sbjct: 445 RGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDE 504
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L M G + Y +I G C G++E+A + + KG P ++YS + +
Sbjct: 505 ATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILH 564
Query: 521 KLLASNKLESAYNLF 535
L + ++ +A L+
Sbjct: 565 GLFQTRRIAAAKELY 579
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 162/380 (42%), Gaps = 41/380 (10%)
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL- 255
DL T SIV+ RAG + A LGR+ G A + + +L LC A +
Sbjct: 95 DLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIA 154
Query: 256 FNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAE----GFSPDSLTFSFLIE 310
M N +YNI++ G + + +L ++A+ G PD ++++ +I
Sbjct: 155 LRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVIN 214
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
GL R G++D A +FD M ++G P+ YN ++ Y S G E + ++ M EP
Sbjct: 215 GLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEP 274
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG--------- 421
++ TY L+ L K+ + +A +VF+ M+ +G P + + L + G
Sbjct: 275 DVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLL 334
Query: 422 ---------PPH-----------------AAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
P H AM+ + K R+ G ++ Y ++ L
Sbjct: 335 DVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRV 394
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
GK + + + G +G ++ +I GLC + + A + E + +G CP+ + +
Sbjct: 395 GKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFF 454
Query: 516 SKLSNKLLASNKLESAYNLF 535
+ L N L + A N+F
Sbjct: 455 NTLLNHLCKEGMVTRAKNIF 474
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 138/293 (47%), Gaps = 8/293 (2%)
Query: 252 ASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
A SLFN M ++ TY+IVI S+ G + L ++ G++ ++TFS L++G
Sbjct: 84 ALSLFNRMPRA---DLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKG 140
Query: 312 LGRAGRIDDAIEV-FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN--- 367
L R DA+++ M GC P+ +YN ++ + + M + +
Sbjct: 141 LCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRG 200
Query: 368 -CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
C P++ +YT +I+GLL+ ++ A +F+EMLD+G+ P+ T L CS G P A
Sbjct: 201 GCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEA 260
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ +++K + G + + Y L+ L G+ ++ M + G+ D IY ++ G
Sbjct: 261 IGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHG 320
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G L +++ +R G P +++ L ++ A F K++
Sbjct: 321 YATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMR 373
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 151/355 (42%), Gaps = 1/355 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D Y ++ + M +L M + G PD +I++ ++ + G V +A+
Sbjct: 310 DSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAF 369
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
++ GL + + V+ LC+ V A S F+ + + L N + + +I G
Sbjct: 370 SKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCAC 429
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ + E + E++ G P+++ F+ L+ L + G + A +FD M D Y
Sbjct: 430 DKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITY 489
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+I Y G DE K +GM +PN TY +I+G K+ ++ DA +F +M
Sbjct: 490 TTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMAS 549
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G+ P ++ L L AA +Y K G KL + Y ++L+ L
Sbjct: 550 KGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDD 609
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
L ++H + + + +I L G+ + A + L +G P+ + Y
Sbjct: 610 ALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTY 664
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 170/429 (39%), Gaps = 79/429 (18%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
+N+++ A + D S M ++G++P++ T VMD+ R G+V A+ RL
Sbjct: 349 FNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLI 408
Query: 226 DFGL------------------KFD-AESL----------------NVVLWCLCQRLHVG 250
GL K+D AE L N +L LC+ V
Sbjct: 409 SEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVT 468
Query: 251 AASSLFNSM--------------------------------KGKVLFNV----MTYNIVI 274
A ++F+ M +G VL V +TYN +I
Sbjct: 469 RAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTII 528
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G+ K G++ + + +++ ++G +P + +S ++ GL + RI A E++ M + G
Sbjct: 529 NGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIK 588
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
YN ++ D+ ++ + + + T+ +I LLK + +A ++
Sbjct: 589 LPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDL 648
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F +L RG+VP+ T ++ L G ++ K GC L+ +L
Sbjct: 649 FASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQ 708
Query: 455 FG---KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
G K G+ L E S S E ++++ G+ + + + E R S
Sbjct: 709 KGEVRKAGVYLSKIDENNFSLEASTAESLVFLVSS----GKYDQHINSIPEKYRP-TAKS 763
Query: 512 RLVYSKLSN 520
R V+S+ N
Sbjct: 764 RAVFSQKKN 772
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 183/394 (46%), Gaps = 8/394 (2%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ +A D YN ++ L + K D + L +M + G PD T + +I AG+
Sbjct: 481 MREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGE 540
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
A + + + + G+ + ++ C++ V A S F SM + +L + TY +
Sbjct: 541 FASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTV 600
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+++G K G+V + E + E+ +G +PD ++ LI+G + G + A +FD M + G
Sbjct: 601 LMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAG 660
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
+ YN ++ + G+ ++ + MS PN TY +I G KS +A+A
Sbjct: 661 LTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAF 720
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
++F+EM +G+VP + T+ ++ C A+ +++ K GC S + L+ +
Sbjct: 721 QLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEK-GCASSSAPFNALINWV 779
Query: 453 SGFGKCGMLLDLWHEMQES-----GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
FGK + D+ + + + G P+D Y +I LC G LE A + +
Sbjct: 780 FKFGKTELTTDMINRLMDGSFDKFGKPND-VTYNIMIDYLCKEGNLEAAKELFHHMQKAN 838
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
P+ + Y+ L N + +++F ++ A
Sbjct: 839 LMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAA 872
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 160/349 (45%), Gaps = 1/349 (0%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
GV P + +++ F R V K ++L ++ + + + +C + A
Sbjct: 380 GVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGA 439
Query: 253 SSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
++ M NV+ Y +I + + + + RVLKE+ +G +PD+ ++ LI G
Sbjct: 440 YNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIG 499
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
L +A ++D+A M E G PD Y A IS YI G+F KY K M PN
Sbjct: 500 LSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPN 559
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
T LI+ K KV +A F M+++GI+ T T + L G + A ++
Sbjct: 560 KVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFH 619
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ R G + +Y L+ S G ++ EM ++G S+ IY ++ G C G
Sbjct: 620 EMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSG 679
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
++E A +++E KGF P+ + Y + + S L A+ LF ++K+
Sbjct: 680 EIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKL 728
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 151/343 (44%), Gaps = 49/343 (14%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D K+Y V++ L + + + +M +G+ PD+ + ++D F + G + KA +
Sbjct: 594 DAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIF 653
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
+ GL + N++L C+ + A L + M GK N +TY +I G+ K
Sbjct: 654 DEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKS 713
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + E ++ E+ +G PDS ++ L++G R ++ AI +F+T EKGC + +
Sbjct: 714 GDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFET-NEKGCASSSAPF 772
Query: 341 NAVIS---------------NYISVGDFDECMK----YYKGMSSYNCE------------ 369
NA+I+ N + G FD+ K Y M Y C+
Sbjct: 773 NALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFH 832
Query: 370 --------PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
P + TYT L++G K + ++ VF+E++ GI P + + G
Sbjct: 833 HMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEG 892
Query: 422 PPHAAM-----MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
A+ M K A GCKLS++ + L LSGF K G
Sbjct: 893 MTTKALVLLDQMFAKNAVDDGCKLSISTCRAL---LSGFAKVG 932
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 156/366 (42%), Gaps = 15/366 (4%)
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
N ++ AL +R D +V M + V D+++ +++ + R G V A +L + E
Sbjct: 193 NHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTE- 251
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVE 285
E L L+V A L SM K L + +YN++I G K ++ +
Sbjct: 252 -------EELGTA------TLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLED 298
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+ +L E+ + G D++ +S LI+GL + D A + M G D Y+ I
Sbjct: 299 AKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFIC 358
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
G ++ + GM ++ P Y LI G + + V E+ E+ R IV
Sbjct: 359 VMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVI 418
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
S T + ++ +CS G A + K+ GC+ ++ Y L++ + G + +
Sbjct: 419 SPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVL 478
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
EM+E G D Y +I GL +++ A + E + GF P Y + + +
Sbjct: 479 KEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEA 538
Query: 526 NKLESA 531
+ SA
Sbjct: 539 GEFASA 544
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 7/167 (4%)
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWS 278
M G + FG D + N+++ LC+ ++ AA LF+ M K ++ V+TY +++G+
Sbjct: 796 MDGSFDKFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYD 854
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK-----GC 333
K+G+ EM V E++A G PD++ +S +I + G A+ + D M K GC
Sbjct: 855 KMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGC 914
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
+ A++S + VG+ + K + M P+ T LI+
Sbjct: 915 KLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELIN 961
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 172/348 (49%), Gaps = 10/348 (2%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P+ T ++++ F + GQ+++A+ + ++ GL +A ++N +L LC+ + +A L
Sbjct: 23 PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 82
Query: 256 FNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
F M+ G L ++NI++ G+ G+ +E KE+ A G PD ++ L+ L
Sbjct: 83 FREMQAGPFLPTSASHNILLRGFFMAGRAIEF---FKEMKASGVEPDLESYHILLSALSD 139
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
+GR+ +A +F M C PD YN ++ Y +G E K + EPN+ T
Sbjct: 140 SGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFT 196
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y+ +I+ K KV +A EVF +M++ VP+ T + + C G A+ ++ +
Sbjct: 197 YSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEME 256
Query: 435 KVGCKLSLTAYKLLLRRLS-GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
K+GCK ++ Y L+ L G +DL+++++ +G Y +I G +
Sbjct: 257 KIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSE--RA 314
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
+ + ++ +G P + Y+ L + L ++N++E A LF + A
Sbjct: 315 NDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMACA 362
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 184/432 (42%), Gaps = 75/432 (17%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A + +YNV+++ + +V SDM G+ P+ T++ ++ GQ+ A++
Sbjct: 22 APNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALK 81
Query: 220 -------------------------MLGRLEDF-------GLKFDAESLNVVLWCLCQRL 247
M GR +F G++ D ES +++L L
Sbjct: 82 LFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASGVEPDLESYHILLSALSDSG 141
Query: 248 HVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ A +LF++M ++MTYN+++ G+ K+GQ E + ++KEI+ G+ P+ T+S
Sbjct: 142 RMAEAHALFSAMTCSP--DIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSI 199
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
+I + ++++A EVF M E C P+ +N +I+ + G ++ +K + M
Sbjct: 200 IINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIG 259
Query: 368 CEPNMDTYTRLISGLLKSR-KVADALEVFEEMLDRGIVPSTGTITSFLE----------- 415
C+ + TY LI L K R V A+++F ++ G+ P+ T S ++
Sbjct: 260 CKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERANDGLR 319
Query: 416 ----------------------PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
LCS A ++ + C ++T + L+R L
Sbjct: 320 LLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLF---NGMACAPNVTTFNFLIRGLC 376
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
K ++ M D + +I C G + +A VM++ L+ GF P+
Sbjct: 377 AQKKVEEARNILDRMT----APDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTY 432
Query: 514 VYSKLSNKLLAS 525
L++ + +S
Sbjct: 433 TTYALAHGIQSS 444
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 149/337 (44%), Gaps = 57/337 (16%)
Query: 141 LSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKAL---GRRKFFDFMCNVLSDMAKEGVNPD 197
++G A+ F +K V D++SY++++ AL GR M + + +PD
Sbjct: 107 MAGRAIEFF--KEMKASGVEPDLESYHILLSALSDSGR------MAEAHALFSAMTCSPD 158
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ T +++MD + + GQ Y+A ++ + G + + + ++++ C C+ V A +F
Sbjct: 159 IMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFM 218
Query: 258 SM-KGKVLFNVMTYNIVISGWSKLGQV-------VEMERV-------------------- 289
M + + N +T+N +I+G+ K G + EME++
Sbjct: 219 KMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKR 278
Query: 290 ---------LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
++ G +P +T++ LI+G R +D + + M +GC PD Y
Sbjct: 279 GGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSE--RANDGLRLLCHMHAEGCKPDVITY 336
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +IS S ++ + + GM+ C PN+ T+ LI GL +KV +A +LD
Sbjct: 337 NCLISGLCSANRVEDAQRLFNGMA---CAPNVTTFNFLIRGLCAQKKVEEA----RNILD 389
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
R P T + + C G H A + K K G
Sbjct: 390 RMTAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHG 426
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 126/287 (43%), Gaps = 36/287 (12%)
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
R+ KE++A F+P++ T++ LI G + G++ A+ VF MK G P+ + N ++
Sbjct: 11 RLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGL 70
Query: 348 ISVGDFDECMK--------------------------------YYKGMSSYNCEPNMDTY 375
+G +K ++K M + EP++++Y
Sbjct: 71 CEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASGVEPDLESY 130
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
L+S L S ++A+A +F M P T ++ C G + A + K+ K
Sbjct: 131 HILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILK 187
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
G + ++ Y +++ K +++ +M ES + + +IAG C G LE+
Sbjct: 188 AGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLED 247
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLAS-NKLESAYNLFRKIKIA 541
A+ + E + G + + Y+ L + L + +A +LF K++ A
Sbjct: 248 AIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGA 294
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 112/255 (43%), Gaps = 32/255 (12%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V +Y++I+ + + V M + P+ T + ++ F +AG + AI++
Sbjct: 193 NVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLF 252
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQ-RLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSK 279
+E G K + N ++ LC+ R V A LFN ++G L ++TYN +I G+S+
Sbjct: 253 AEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSE 312
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK---------- 329
+ + R+L + AEG PD +T++ LI GL A R++DA +F+ M
Sbjct: 313 --RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMACAPNVTTFNF 370
Query: 330 ------------------EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
++ PD +N +I + G + + K M + PN
Sbjct: 371 LIRGLCAQKKVEEARNILDRMTAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPN 430
Query: 372 MDTYTRLISGLLKSR 386
T L G+ S+
Sbjct: 431 TYTTYALAHGIQSSK 445
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 6/224 (2%)
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
A + D A+ +F + P+ + YN +I + G + + + M S PN T
Sbjct: 3 ARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 62
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
L+ GL + +++ AL++F EM +P++ + L G A+ +K+ +
Sbjct: 63 MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMK 119
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G + L +Y +LL LS G+ L+ M S D Y ++ G C IGQ
Sbjct: 120 ASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTY 176
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
A +M+E L+ G+ P+ YS + N +K+E A+ +F K+
Sbjct: 177 EAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKM 220
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 171/369 (46%), Gaps = 6/369 (1%)
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAAS 253
V PD+ + ++D + V A + + D + N ++ C + A
Sbjct: 329 VQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAI 388
Query: 254 SLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
LFN M K ++ +V T++I++ G+ K G + E + VL ++ + PD +T+S L++G
Sbjct: 389 DLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGY 448
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
++ A +F+TM +G + +YN +I+ + + DE MK +K M P++
Sbjct: 449 CLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDV 508
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
TY+ LI GL KS +++ ALE+ +EM RG P T S L+ LC A+ + K
Sbjct: 509 ITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTK 568
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+ G + + Y +L++ L GK ++ ++ GY D Y +I G C+ G
Sbjct: 569 LKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGL 628
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK-----IKIARQNDYA 547
+ A+ ++ + G P Y + L ++ + A L R+ + +A +D
Sbjct: 629 FDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVALTDDLV 688
Query: 548 RRLWRSKGW 556
+ + W
Sbjct: 689 ASILVRRTW 697
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 165/348 (47%), Gaps = 1/348 (0%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
G + D + +++ + G+ A+++L R + ++ D N ++ +C+ HV A
Sbjct: 293 GFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDA 352
Query: 253 SSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
L++ K +F +V TYN +ISG+ +G++ + + ++ ++ PD TFS L++G
Sbjct: 353 FDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDG 412
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
+ G I +A V M ++ PD Y++++ Y V + ++ + MS N
Sbjct: 413 FCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTAN 472
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+ +Y +I+G K + V +A+++F+EM + I P T +S ++ LC G A+ +
Sbjct: 473 VQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVD 532
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ G + + Y +L L + L +++ G D Y ++ GLC G
Sbjct: 533 EMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSG 592
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+LE+A V E+ L KG+ Y+ + + A L K++
Sbjct: 593 KLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKME 640
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 154/357 (43%), Gaps = 1/357 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
+ K G PD TL+ + F GQ+++A+ ++ G D S ++ LC+
Sbjct: 254 ILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGE 313
Query: 249 VGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
AA L GK++ +V+ YN +I G K V + + E V++ PD T++
Sbjct: 314 TKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNA 373
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI G G++ DAI++F+ M K PD ++ ++ + G+ E M +
Sbjct: 374 LISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQS 433
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
+P++ TY+ L+ G +V A +F M RG+ + + + C AM
Sbjct: 434 IKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAM 493
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++K+ + Y L+ L G+ L+L EM G D Y ++ L
Sbjct: 494 KLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDAL 553
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
C ++ A+ ++ + +G P Y+ L L S KLE A +F + + N
Sbjct: 554 CKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYN 610
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 131/283 (46%), Gaps = 36/283 (12%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N+ DV +++++V + NVL+ M K+ + PD+ T S +MD + +V KA
Sbjct: 398 NIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKA 457
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISG 276
+ + G+ + +S N+++ C+ V A LF M K +F +V+TY+ +I G
Sbjct: 458 ESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDG 517
Query: 277 WSKLGQVV-------EME----------------------------RVLKEIVAEGFSPD 301
K G++ EM +L ++ +G PD
Sbjct: 518 LCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPD 577
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
T++ L++GL ++G+++DA +VF+ + KG D AY +I + G FDE +
Sbjct: 578 MNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLS 637
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
M C P+ TY +I L + + A ++ EM+ RG++
Sbjct: 638 KMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL 680
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 106/193 (54%), Gaps = 1/193 (0%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+ H V +V+SYN+++ + K D + +M + + PD+ T S ++D ++G
Sbjct: 463 TMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSG 522
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYN 271
++ A++++ + G + D + N +L LC++ HV A +L +KG+ + ++ TY
Sbjct: 523 RISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYT 582
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
I++ G + G++ + +V ++++ +G++ D ++ +I+G G D+A+ + M+E
Sbjct: 583 ILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEEN 642
Query: 332 GCGPDTNAYNAVI 344
GC PD Y +I
Sbjct: 643 GCIPDAKTYEIII 655
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 176/444 (39%), Gaps = 55/444 (12%)
Query: 142 SGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
+ +A+ LF+ ++P D++ + I+ +L + K + + ++ M +G+ +
Sbjct: 91 NNDAVSLFYRLLRQNPT-PPDIE-FGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNC 148
Query: 202 SIVMDSFIRAGQVYKAIQMLGR----LEDFGLKFDAESLN---------VVLWCLCQRLH 248
+I+++SF + G + A +L R +E FD ++L ++LW +RL
Sbjct: 149 NILINSFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDF-KRLF 207
Query: 249 VG--AASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
+ S LFN + K+L I K ++ +E +I+ G+ PD++T
Sbjct: 208 LKDFLQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEI-SIEYTPPKILKNGYEPDTITL 266
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKG--------------------------------- 332
+ I+G G+I A+ D + G
Sbjct: 267 TTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDG 326
Query: 333 --CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
PD YN +I ++ Y S P++ TY LISG K+ D
Sbjct: 327 KLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKD 386
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A+++F +M + I+P T + ++ C G A + K K + Y L+
Sbjct: 387 AIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMD 446
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
+ +++ M G ++ + Y +I G C I ++ A+ + +E K P
Sbjct: 447 GYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFP 506
Query: 511 SRLVYSKLSNKLLASNKLESAYNL 534
+ YS L + L S ++ A L
Sbjct: 507 DVITYSSLIDGLCKSGRISYALEL 530
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 59/122 (48%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K + D+ +Y ++VK L + + V D+ +G N D+ ++++ F G
Sbjct: 569 LKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGL 628
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
+A+ +L ++E+ G DA++ +++ L ++ A L M + L +T ++V
Sbjct: 629 FDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVALTDDLV 688
Query: 274 IS 275
S
Sbjct: 689 AS 690
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 173/349 (49%), Gaps = 1/349 (0%)
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
+G D + I+++ + G+ AI++L +ED + D + ++ LC+ V
Sbjct: 109 QGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDE 168
Query: 252 ASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A L++ M + +F +V+TY +I G+ GQ++E +L E++ + +P+ T++ LI+
Sbjct: 169 AYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLID 228
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
L + G++ ++ + M +KG PD Y+ ++ Y VG+ + + + M P
Sbjct: 229 TLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNP 288
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
++ +Y +I+GL K ++V +A+ + EML + ++P T T +S ++ LC G + +
Sbjct: 289 DVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLT 348
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
K+ G +L Y LL L + L+ +M+E G + Y +I GLC
Sbjct: 349 KEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKG 408
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G+L+ + + L KG+C Y+ + + L + A + K++
Sbjct: 409 GRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKME 457
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 186/371 (50%), Gaps = 10/371 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV Y+ I+ L + K D ++ S+M G+ PD+ T + ++ F AGQ+ +A +L
Sbjct: 149 DVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLL 208
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ + + + N ++ LC+ V + +L M K V +V+ Y+I++ G+ +
Sbjct: 209 NEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLV 268
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+V + +++ +V G +PD +++ +I GL + R+D+A+ + M K PDT Y
Sbjct: 269 GEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTY 328
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+++I +G + K M N+ TY L+ GL K++ + A+ +F +M +
Sbjct: 329 SSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKE 388
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
RGI P+ T T+ ++ LC G +++ G + + Y ++ +SG K GM
Sbjct: 389 RGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVM---ISGLCKEGM 445
Query: 461 L---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L + +M+++G + +E +I L + + A ++ E + KG P R +S+
Sbjct: 446 FDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLPFRNFHSE 505
Query: 518 ---LSNKLLAS 525
++NK++ +
Sbjct: 506 RSSVTNKVIVN 516
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 173/372 (46%), Gaps = 1/372 (0%)
Query: 169 IVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
I+ +L + K + + ++ M +G+ PDL TLSI+++ F GQ+ + +LG++ G
Sbjct: 16 ILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLG 75
Query: 229 LKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEME 287
+ + LN ++ LC + V + + + + + ++Y I+++G K+G+
Sbjct: 76 YQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAI 135
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
++L+ I PD + +S +I+GL + +D+A +++ M +G PD Y +I +
Sbjct: 136 KLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGF 195
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
G E M N PN+ TY LI L K KV ++ + M +G+ P
Sbjct: 196 CLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDV 255
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
+ ++ C G A ++ + G + +Y +++ L + ++L E
Sbjct: 256 VIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLRE 315
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
M D Y +I GLC +G++ + + +E +G + + Y+ L + L +
Sbjct: 316 MLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQN 375
Query: 528 LESAYNLFRKIK 539
L+ A LF K+K
Sbjct: 376 LDKAIALFMKMK 387
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 89/210 (42%)
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P + ++ + + + + + K M + P++ T + LI+ ++A + V
Sbjct: 8 PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
++L G P+T + + ++ LC G ++ + K G ++ +Y +LL L
Sbjct: 68 LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G+ + L +++ D +Y +I GLC ++ A + E +G P +
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187
Query: 515 YSKLSNKLLASNKLESAYNLFRKIKIARQN 544
Y+ L + +L A+ L ++ + N
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNIN 217
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 207/486 (42%), Gaps = 49/486 (10%)
Query: 58 ELSDLFQISSHNSFPNVYKESRSNSVKRIDSS-RAVDEFLLPEERLRGVFLQKLKGKGVI 116
E+ +F++S+ + P S + V R D S R +DE + R+ +F + I
Sbjct: 28 EIVQMFRVSTPS--PEASNFSFNRKVLRRDPSVRTLDERFI---RILKIFKWGSDAEKAI 82
Query: 117 EDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRR 176
E + + VD L V +V++ ++ A + FF WA K + D +Y +++ L
Sbjct: 83 E--VLKLKVDHRL--VHQVLDI-DVEIRAKIQFFKWAGKRQHFQHDSTTYMALIRCLEES 137
Query: 177 KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESL 236
D M + DM + + S ++ +A V KA+
Sbjct: 138 GLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKAL------------------ 179
Query: 237 NVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMT-YNIVISGWSKLGQVVEMERVLKEIVA 295
S+F +KG+ T YN +I G ++ + EI +
Sbjct: 180 -----------------SVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICS 222
Query: 296 EG-FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
EG SPD++T+S LI G+ R D A +FD MKE G P Y +++ Y + +
Sbjct: 223 EGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVE 282
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
++ + M C P + TYT LI GL K +V DA +F ML G P I + +
Sbjct: 283 AALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLI 342
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE-MQESGY 473
L G A+ ++ K + C ++ Y +++ + LW E M+ +G
Sbjct: 343 NILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGI 402
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
Y +I G C ++E A+L++EE KGF P Y L + L + + E+A
Sbjct: 403 APSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANE 462
Query: 534 LFRKIK 539
LF+++K
Sbjct: 463 LFQELK 468
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 192/412 (46%), Gaps = 11/412 (2%)
Query: 134 KVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG 193
K++ + + +A+ +F+ + N V YN ++ L + + + +++ EG
Sbjct: 167 KILGKAKMVNKALSVFYQIKGRKCNPTATV--YNTLILMLMHEGHHEKIHELYNEICSEG 224
Query: 194 -VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
+PD T S ++ +F + + A ++ +++ GL + +L + V AA
Sbjct: 225 NCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAA 284
Query: 253 SSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
L MKGK V TY +I G K+G+V + + ++ +G PD + + LI
Sbjct: 285 LRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINI 344
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN-YISVGDFDECMKYYKGMSSYNCEP 370
LGRAGR++DA+++F M C P+ YN VI + S E +++ M + P
Sbjct: 345 LGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAP 404
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
+ TY LI G K+ +V AL + EEM ++G P S ++ L AA ++
Sbjct: 405 SSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELF 464
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGL 487
++ ++ + S Y ++++ FG CG L +DL+ E ++ G D Y +++G+
Sbjct: 465 QELKENCGRSSARVYAVMIKH---FGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGM 521
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G ++ A +M G P ++ + N L + + A +F K+K
Sbjct: 522 IRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMK 573
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 159/341 (46%), Gaps = 2/341 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K A V +Y ++K LG+ D ++ +M K+G PD+ ++ +++ RAG+
Sbjct: 291 MKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGR 350
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL-FNSMKGK-VLFNVMTYN 271
+ A+++ G+++ + + N V+ + + + ++L F MK + + TY
Sbjct: 351 LEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYA 410
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
I+I G+ K +V + +L+E+ +GF P + LI+ LGRA R + A E+F +KE
Sbjct: 411 ILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKEN 470
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
Y +I ++ + G + + + C P++ TY L+SG++++ + +A
Sbjct: 471 CGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEA 530
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+ M + G P + L L G P A+ M+ K ++ +Y +L
Sbjct: 531 HSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSC 590
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
LS G M L EM+ G+ D Y ++ + + +
Sbjct: 591 LSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGKVDE 631
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/407 (20%), Positives = 173/407 (42%), Gaps = 37/407 (9%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
+N N + D +Y+ ++ A G+ + +DF + +M + G++P + + ++ +
Sbjct: 216 LYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMY 275
Query: 209 IRAGQVYKAIQML-------------------------GRLEDF----------GLKFDA 233
+ +V A++++ GR++D G K D
Sbjct: 276 FKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDV 335
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISG-WSKLGQVVEMERVLK 291
+N ++ L + + A LF M + NV+TYN VI + E +
Sbjct: 336 VLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFE 395
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
++ A G +P S T++ LI+G + R++ A+ + + M EKG P AY ++I +
Sbjct: 396 KMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAK 455
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
++ + ++ + + Y +I +++DA+++F E G P T
Sbjct: 456 RYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYN 515
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
+ + + G A + + R+ GC + ++ ++L L+ G ++++ +M+ES
Sbjct: 516 ALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKES 575
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
D Y +++ L G E A +M E KGF + YS +
Sbjct: 576 EIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSI 622
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 182/366 (49%), Gaps = 1/366 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ + + D +YN+++ +L R D VL + + P + T +I++++ + G
Sbjct: 180 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGG 239
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
V +A+++L + GLK D + N ++ +C+ V A + +++ K +V++YNI
Sbjct: 240 VDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNI 299
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
++ G+ E E+++ ++ +E P+ +T+S LI L R G+I++A+ + MKEKG
Sbjct: 300 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 359
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD +Y+ +I+ + G D +++ + M S C P++ Y +++ L K+ K AL
Sbjct: 360 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 419
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
E+F ++ + G P++ + + L S G A+ M + G Y ++ L
Sbjct: 420 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCL 479
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G +L +M+ + Y V+ G C ++E+A+ V++ + G P+
Sbjct: 480 CREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNE 539
Query: 513 LVYSKL 518
Y+ L
Sbjct: 540 TTYTVL 545
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 178/392 (45%), Gaps = 37/392 (9%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
++L M ++G NPD+ + ++ F V KA++++ LE FG + D + N ++
Sbjct: 106 HLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAYNALINGF 164
Query: 244 CQRLHVGAASSLFNSMKGK------VLFNVM----------------------------- 268
C+ + A+ + + M+ K V +N+M
Sbjct: 165 CKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTV 224
Query: 269 -TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
TY I+I G V E ++L E+++ G PD T++ +I G+ + G +D A E+
Sbjct: 225 ITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRN 284
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
++ KGC PD +YN ++ ++ G ++E K M S C+PN+ TY+ LI+ L + K
Sbjct: 285 LELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 344
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A+ + + M ++G+ P + + C G A+ + GC + Y
Sbjct: 345 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 404
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
+L L GK L+++ ++ E G + Y + + L + G A+ ++ E + G
Sbjct: 405 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNG 464
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P + Y+ + + L ++ A+ L ++
Sbjct: 465 IDPDEITYNSMISCLCREGMVDKAFELLVDMR 496
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 167/375 (44%), Gaps = 1/375 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN ++ + D VL M + +PD T +I++ S G++ A+++L
Sbjct: 153 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 212
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
+L + + +++ V A L + M + L ++ TYN +I G K
Sbjct: 213 DQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKE 272
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G V +++ + +G PD ++++ L+ L G+ ++ ++ M + C P+ Y
Sbjct: 273 GMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 332
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +I+ G +E M K M P+ +Y LI+ + ++ A+E E M+
Sbjct: 333 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 392
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G +P + L LC G A+ ++ K +VGC + ++Y + L G
Sbjct: 393 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 452
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L + EM +G D Y +I+ LC G ++ A ++ + F PS + Y+ +
Sbjct: 453 ALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLL 512
Query: 521 KLLASNKLESAYNLF 535
++++E A ++
Sbjct: 513 GFCKAHRIEDAIDVL 527
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 153/320 (47%), Gaps = 21/320 (6%)
Query: 115 VIEDALWNVNVDLSLDVVGKVVNRG-------------NLSGEAMV-----LFFNWAIKH 156
+IE + VD +L ++ ++++RG + E MV + N +K
Sbjct: 230 LIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELK- 288
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
DV SYN++++AL + ++ +++ M E +P++ T SI++ + R G++ +
Sbjct: 289 -GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 347
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVIS 275
A+ +L +++ GL DA S + ++ C+ + A +M L +++ YN V++
Sbjct: 348 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 407
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
K G+ + + ++ G SP+S +++ + L +G A+ + M G P
Sbjct: 408 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDP 467
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D YN++IS G D+ + M S P++ TY ++ G K+ ++ DA++V
Sbjct: 468 DEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVL 527
Query: 396 EEMLDRGIVPSTGTITSFLE 415
+ M+ G P+ T T +E
Sbjct: 528 DSMVGNGCRPNETTYTVLIE 547
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 9/246 (3%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV +Y++++ L R + N+L M ++G+ PD + ++ +F R G++
Sbjct: 327 PNVV----TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 382
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--NVMTYNIVI 274
AI+ L + G D + N VL LC+ A +F + G+V N +YN +
Sbjct: 383 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL-GEVGCSPNSSSYNTMF 441
Query: 275 SG-WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
S WS ++ + +L E+V+ G PD +T++ +I L R G +D A E+ M+
Sbjct: 442 SALWSSGDKIRALHMIL-EMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEF 500
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
P YN V+ + ++ + M C PN TYT LI G+ + A+A+E
Sbjct: 501 HPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAME 560
Query: 394 VFEEML 399
+ +++
Sbjct: 561 LANDLV 566
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 134/328 (40%), Gaps = 71/328 (21%)
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G +E +L+ +V +G++PD + + LI+G + A+ V + +++ G PD AY
Sbjct: 99 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAY 157
Query: 341 NAVISNY-----------------------------------ISVGDFDECMKYYKGMSS 365
NA+I+ + S G D +K + S
Sbjct: 158 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLS 217
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
NC+P + TYT LI + V +AL++ +EML RG+ P T + + +C G
Sbjct: 218 DNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 277
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFG---------------KC------------ 458
A M + GC+ + +Y +LLR L G KC
Sbjct: 278 AFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT 337
Query: 459 -----GML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
G + ++L M+E G D Y+ +IA C G+L+ A+ +E + G P
Sbjct: 338 TLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 397
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y+ + L + K + A +F K+
Sbjct: 398 DIVNYNTVLATLCKNGKADQALEIFGKL 425
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 1/225 (0%)
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
R+G +++ + +TM KG PD +I + ++ + + ++ + + + +P++
Sbjct: 97 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVF 155
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
Y LI+G K ++ DA V + M + P T T + LCS G A+ + +
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQL 215
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
C+ ++ Y +L+ G L L EM G D Y +I G+C G +
Sbjct: 216 LSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMV 275
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ A ++ KG P + Y+ L LL K E L K+
Sbjct: 276 DRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 320
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 159/333 (47%), Gaps = 1/333 (0%)
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
S++ + G P ++ +I+++ F + G + A + + GL+ S N ++ LC+
Sbjct: 212 SEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKS 271
Query: 247 LHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
++ L +M+ ++ +V TY+++I G K G++ E++ E+ G P+ +TF
Sbjct: 272 RNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITF 331
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LI+G R+ R+D A+ + M G PD YN +++ VGD ++ K M
Sbjct: 332 TALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKM 391
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
+P+ TYT LI G K + A+E+ + M + G+V T+ + C G
Sbjct: 392 VGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRD 451
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A ++ + G K Y +++ G M L EMQ +G+ Y ++
Sbjct: 452 AERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMN 511
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
GLC GQ++NA +++E L G P + Y+ L
Sbjct: 512 GLCKQGQMKNANMLLEAMLNLGVTPDDITYNIL 544
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 123/274 (44%)
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V YNI+I+ + K G + + + + EI G P +++F+ LI GL ++ +D+ +
Sbjct: 223 VQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKK 282
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
TM+E PD Y+ +I G D + + M PN T+T LI G +SR
Sbjct: 283 TMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSR 342
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
++ A+ + +ML G+ P + L LC G + A + + + VG K Y
Sbjct: 343 RMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYT 402
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+ G +++ M E G D + +I+G C G++ +A + E +
Sbjct: 403 TLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEA 462
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
G P Y+ + + ++ + L ++++I
Sbjct: 463 GMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQI 496
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 122/264 (46%), Gaps = 1/264 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV +Y+V++ L + D + +M + G+ P+ T + ++D R+ ++ A+
Sbjct: 289 IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAM 348
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGW 277
++ G+K D N +L LC+ V A L + MK + + +TY +I G+
Sbjct: 349 NTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGY 408
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G + + K + EG D++ F+ LI G R GR+ DA M E G PD
Sbjct: 409 CKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDD 468
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y VI Y G+ K K M +P + TY L++GL K ++ +A + E
Sbjct: 469 ATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEA 528
Query: 398 MLDRGIVPSTGTITSFLEPLCSYG 421
ML+ G+ P T LE C G
Sbjct: 529 MLNLGVTPDDITYNILLEGHCKNG 552
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 182/440 (41%), Gaps = 59/440 (13%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDM-AKEGVNPDLETLSIVMD 206
FFNW P +SY + L + F +++ + +++G + + ++D
Sbjct: 86 SFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILD 145
Query: 207 S----------------FIRAGQVYKAIQML---------------GRLED--------- 226
+ + +G V AIQ G L D
Sbjct: 146 TAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPV 205
Query: 227 -----------FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVI 274
+G + N+++ C+ + A +FN ++ + L +++N +I
Sbjct: 206 TIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLI 265
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G K + E R+ K + PD T+S LI GL + GR+D A ++FD M+++G
Sbjct: 266 NGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLR 325
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ + A+I D M Y M + +P++ Y L++GL K V A ++
Sbjct: 326 PNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKL 385
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+EM G+ P T T+ ++ C G +AM + K + G L A+ L +SG
Sbjct: 386 VDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTAL---ISG 442
Query: 455 FGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
F + G + D EM E+G D Y VI G C G ++ +++E G P
Sbjct: 443 FCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPG 502
Query: 512 RLVYSKLSNKLLASNKLESA 531
+ Y+ L N L ++++A
Sbjct: 503 VITYNVLMNGLCKQGQMKNA 522
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 93/187 (49%), Gaps = 4/187 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +Y ++ + + + M +EGV D + ++ F R G+V A + L
Sbjct: 397 DKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTL 456
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
+ + G+K D + +V+ C++ +V L M+ V+TYN++++G K
Sbjct: 457 REMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQ 516
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
GQ+ +L+ ++ G +PD +T++ L+EG + G+ +D +++ + EKG D Y
Sbjct: 517 GQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRN---EKGLIVDYAYY 573
Query: 341 NAVISNY 347
+++S Y
Sbjct: 574 TSLVSEY 580
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 97/239 (40%)
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+ F L+ +G + DAI+ F ++ + ++ I+ +Y
Sbjct: 153 NFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYS 212
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
+ Y P + Y LI+ K + DA +F E+ RG+ P+T + + + LC
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
+ K + + Y +L+ L G+ + L+ EMQ+ G +G +
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFT 332
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+I G ++++A+ + L G P ++Y+ L N L + A L ++K+
Sbjct: 333 ALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKM 391
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 173/396 (43%), Gaps = 17/396 (4%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL----------------ETLSIVMDSFI 209
+N I+ +L + K + + ++ M EG+NP L T + ++
Sbjct: 79 FNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLC 138
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVM 268
GQ+++A+ + G + D ++ LC+ AA L + G V NV+
Sbjct: 139 LKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVV 198
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
Y+ +I G K V + + E+V++G SP+ +T+S LI G G++ DAI++F+ M
Sbjct: 199 MYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKM 258
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ PD +N ++ + G E + M +PN+ TY L+ G ++V
Sbjct: 259 ILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEV 318
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A + M RG+ P + ++ C AM ++K+ + Y L
Sbjct: 319 NKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSL 378
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L GK L L EM + G P D Y ++ LC Q++ A+ ++ + +G
Sbjct: 379 IDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGI 438
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
P+ Y+ L + L +LE A+N+F + + N
Sbjct: 439 RPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYN 474
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 171/376 (45%), Gaps = 34/376 (9%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V +V Y+ I+ + + K + ++ S+M +G++P++ T S ++ F GQ+ AI
Sbjct: 193 VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAI 252
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
+ ++ +K D V T+NI++ G+
Sbjct: 253 DLFNKMILENIKPD----------------------------------VYTFNILVDGFC 278
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G++ E + V ++ +G P+ +T+ L++G ++ A + TM ++G PD
Sbjct: 279 KDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQ 338
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
+YN +I + + DE M +K M + P++ TY LI GL K K++ AL++ +EM
Sbjct: 339 SYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEM 398
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
DRG+ P T +S L+ LC A+ + K + G + ++ Y +L+ L G+
Sbjct: 399 HDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRL 458
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+++ ++ GY Y +I G CN G + A+ ++ + P + Y +
Sbjct: 459 EDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEII 518
Query: 519 SNKLLASNKLESAYNL 534
L ++ + A L
Sbjct: 519 IRSLFDKDENDKAEKL 534
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 162/331 (48%), Gaps = 1/331 (0%)
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVM 268
+ G+ A+ +L R++ ++ + + ++ +C+ HV A L++ M K + NV+
Sbjct: 174 KVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVV 233
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TY+ +ISG+ +GQ+ + + +++ E PD TF+ L++G + G++ + VF M
Sbjct: 234 TYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMM 293
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
++G P+ Y +++ Y V + ++ MS P++ +Y LI G K +KV
Sbjct: 294 MKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKV 353
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A+ +F+EM + I+P T S ++ LC G A+ + + G + Y +
Sbjct: 354 DEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSI 413
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L L + + L ++++ G + Y +I GLC G+LE+A + E+ L KG+
Sbjct: 414 LDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGY 473
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ Y+ + + + A L K+K
Sbjct: 474 NITVNTYTVMIHGFCNKGLFDEALALLSKMK 504
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 106/205 (51%), Gaps = 4/205 (1%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
+ + V D++SYN+++ + K D N+ +M + + PD+ T + ++D +
Sbjct: 326 YTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKL 385
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTY 270
G++ A++++ + D G+ D + + +L LC+ V A +L +K + + N+ TY
Sbjct: 386 GKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTY 445
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
I+I G K G++ + + ++++ +G++ T++ +I G G D+A+ + MK+
Sbjct: 446 TILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKD 505
Query: 331 KGCGPDTNAYNAVISNYISVGDFDE 355
C PD Y +I S+ D DE
Sbjct: 506 NSCIPDAVTYEIIIR---SLFDKDE 527
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 172/326 (52%), Gaps = 4/326 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
IK + DV+SY++++ L + F + +M ++G++ D +IV+D F ++G+
Sbjct: 577 IKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGK 636
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNI 272
V KA Q+L ++ GL+ + V+ L + + A LF K K + NV+ Y+
Sbjct: 637 VNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSS 696
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G+ K+G++ E +L+E++ +G +P++ T++ L++ L +A ID+A+ F MK
Sbjct: 697 LIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLK 756
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
C P+ Y+ +++ V F++ +++ M +PN TYT +ISGL + V +A
Sbjct: 757 CPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAK 816
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL-SLTAYKLL--L 449
++FE G +P + + +E L + A +++++ R GC++ S T LL L
Sbjct: 817 DLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDAL 876
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPS 475
+ + ++ + EM +S + +
Sbjct: 877 HKADCLEQAAIVGAVLREMAKSQHAT 902
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 204/438 (46%), Gaps = 19/438 (4%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
F +LK +G++ D D++ + V+ + EA+ LF + V +
Sbjct: 294 FFHELKSQGLVPD-------DVTFTSMIGVLCKAERVDEAVELF--EELDSNKSVPCVYA 344
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN ++ G F+ ++L ++G P + + ++ R G+V +A+++L
Sbjct: 345 YNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILE--- 401
Query: 226 DFGLKFDA----ESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
+K DA S N+++ LC+ + AA + +SMK LF N++T NI+I K
Sbjct: 402 --AMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKA 459
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
++ E + + + +PDS+TF LI+GLGR G+++DA +++ M + G P+ Y
Sbjct: 460 QRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVY 519
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++I N+ G ++ K YK M C P++ + + K+ ++ +FEE+
Sbjct: 520 TSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKA 579
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G+ P + + + L G ++ + ++ G L AY +++ GK
Sbjct: 580 QGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNK 639
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L EM+ G Y VI GL I +L+ A ++ EE+ K + +VYS L +
Sbjct: 640 AYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLID 699
Query: 521 KLLASNKLESAYNLFRKI 538
+++ AY + ++
Sbjct: 700 GFGKVGRIDEAYLILEEL 717
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 187/420 (44%), Gaps = 10/420 (2%)
Query: 120 LWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFF 179
L+NV +D VGKV M F +K + D ++ ++ L + +
Sbjct: 274 LYNVCID-CFGKVGKV---------DMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERV 323
Query: 180 DFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVV 239
D + ++ P + + ++ + G+ +A +L R + G + N +
Sbjct: 324 DEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCI 383
Query: 240 LWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS 299
L CL ++ V A + +MK N+ +YNI+I K G++ +V + G
Sbjct: 384 LTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLF 443
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P+ +T + +I+ L +A R+D+A +F + K C PD+ + ++I G ++
Sbjct: 444 PNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYML 503
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
Y+ M PN YT LI K + D ++++EM+ RG P + ++++ +
Sbjct: 504 YEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFK 563
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
G ++++ + G + +Y +L+ L G L++EM+E G D
Sbjct: 564 AGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRA 623
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y VI G C G++ A ++EE KG P+ + Y + + L ++L+ AY LF + K
Sbjct: 624 YNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 683
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 179/406 (44%), Gaps = 3/406 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA +F + H D ++ ++ LGR + + M G P+ +
Sbjct: 464 EACSIFL--GLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTS 521
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++ +F + G+ ++ + G D LN + C+ + + +LF +K +
Sbjct: 522 LIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQG 581
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
L +V +Y+I+I G K G + ++ E+ +G D+ ++ +I+G ++G+++ A
Sbjct: 582 LTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAY 641
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
++ + MK KG P Y +VI + DE ++ S + N+ Y+ LI G
Sbjct: 642 QLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGF 701
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K ++ +A + EE++ +G+ P+T T L+ L A++ ++ + + C +
Sbjct: 702 GKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNE 761
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y +++ L K W EMQ+ G + Y +I+GL +G + A + E
Sbjct: 762 VTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFER 821
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYAR 548
G P Y+ + L +NK AY LF + ++ Y++
Sbjct: 822 FKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSK 867
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/474 (22%), Positives = 202/474 (42%), Gaps = 44/474 (9%)
Query: 68 HNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGV-----FLQKLKGKGVIEDALWN 122
+ S P +Y + + NS D+S + D L E + V L +EDAL
Sbjct: 34 NGSPPEMYGKVKVNSFVD-DASHSQDNALKSEGMRKTVHDVCRVLDTYPWGAALEDALNT 92
Query: 123 VNVDLSLDVVGKVVNRGNLSGEAMVL-FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDF 181
+ ++V V+ R L + L +F W + ++YN ++ + R + ++
Sbjct: 93 FDEMPQPELVVGVIRR--LKDVRVALHYFRWVERKTKQLHSPEAYNALLMLMARTRNLEY 150
Query: 182 MCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLW 241
+ +L +M+ G P T ++ SF+++ ++ +A ++ + F +
Sbjct: 151 LEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFR----------- 199
Query: 242 CLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
A S + ++ G +S + ++ + R ++EI G+
Sbjct: 200 ---------PAYSAYTTLIG-----------ALSAAHEADPMLTLLRQMQEI---GYEVT 236
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
F+ LI R GR+D A+ + D MK D YN I + VG D K++
Sbjct: 237 VHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFH 296
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
+ S P+ T+T +I L K+ +V +A+E+FEE+ VP + + S G
Sbjct: 297 ELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVG 356
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
+ A + ++ ++ GC S+ AY +L L GK L + M+ P+ Y
Sbjct: 357 KFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTS-YN 415
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+I LC G+LE A+ V + G P+ + + + ++L + +L+ A ++F
Sbjct: 416 ILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIF 469
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/281 (19%), Positives = 115/281 (40%)
Query: 260 KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
K K L + YN ++ ++ + +E++L+E+ GF P + T ++ ++ ++
Sbjct: 125 KTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLR 184
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
+A V +TM++ P +AY +I + + D + + M E + +T LI
Sbjct: 185 EAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLI 244
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
+ +V AL + +EM ++ G A + + + G
Sbjct: 245 CVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLV 304
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+ ++ L + ++L+ E+ + Y +I G ++G+ A +
Sbjct: 305 PDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSL 364
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+E RKG PS + Y+ + L K+E A + +K+
Sbjct: 365 LERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKM 405
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 100/254 (39%), Gaps = 6/254 (2%)
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+ER K++ SP++ ++ L+ + R ++ ++ + M G GP N +++
Sbjct: 122 VERKTKQL----HSPEA--YNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVA 175
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+++ E + M + P YT LI L + + L + +M + G
Sbjct: 176 SFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEV 235
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
+ T+ + G AA+ + + + L Y + + GK M +
Sbjct: 236 TVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFF 295
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
HE++ G D + +I LC +++ AV + EE P Y+ + +
Sbjct: 296 HELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSV 355
Query: 526 NKLESAYNLFRKIK 539
K AY+L + K
Sbjct: 356 GKFNEAYSLLERQK 369
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 179/375 (47%), Gaps = 1/375 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+++Y+ ++ LG+R+ D + +L +M G+ P++ T +I + RAG++ +A ++L
Sbjct: 223 LQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILK 282
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLG 281
R++D G D + V++ LC + A +F MK G+ + +TY ++ +S
Sbjct: 283 RMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNR 342
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ +++ E+ +G PD +TF+ L++ L +AG +A + D M+++G P+ + YN
Sbjct: 343 DLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYN 402
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I + V D+ ++ + M S +P TY I KS ALE FE+M +
Sbjct: 403 TLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK 462
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
GI P+ + L L G A ++ + +G Y ++++ S G+
Sbjct: 463 GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEA 522
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+ L EM E+G D + +I L +++ A + P+ + Y+ L
Sbjct: 523 IKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAG 582
Query: 522 LLASNKLESAYNLFR 536
L + K++ A LF
Sbjct: 583 LGKNGKIQEAIELFE 597
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 187/391 (47%), Gaps = 10/391 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV ++ ++V AL + F + L M +G+ P+L T + ++ +R ++ A+++
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
G +E G+K A + V + + +A F MK K + N++ N + +K
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 481
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ E +++ + G PDS+T++ +++ + G ID+AI++ M E GC PD
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV 541
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N++I+ DE K + M +P + TY L++GL K+ K+ +A+E+FE M+
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G P+T T + + LC A+ M K +GC + Y ++ L G+
Sbjct: 602 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 661
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC---PSRLVYSK 517
+ +H+M++ YP D ++ G+ +E+A ++ L C P+ L +
Sbjct: 662 AMCFFHQMKKLVYP-DFVTLCTLLPGVVKASLIEDAYKIITNFLYN--CADQPANLFWED 718
Query: 518 LSNKLLASNKLESAYNLFRKI---KIARQND 545
L +LA +++A + ++ I R D
Sbjct: 719 LIGSILAEAGIDNAVSFSERLVANGICRDGD 749
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 184/404 (45%), Gaps = 9/404 (2%)
Query: 144 EAMVLFFNWA-IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
EAM F + +P+ +VKA + + N L + A + N E L
Sbjct: 661 EAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDL- 719
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNV-VLWCLCQRLHVGAASSLFNSMKG 261
+ S + + A+ RL G+ D +S+ V ++ C+ +V A +LF
Sbjct: 720 --IGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTK 777
Query: 262 K--VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
V + TYN++I G + + + V ++ + G PD T++FL++ G++G+ID
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID 837
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK-YYKGMSSYNCEPNMDTYTRL 378
+ E++ M C +T +N VIS + G+ D+ + YY MS + P TY L
Sbjct: 838 ELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 897
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I GL KS ++ +A ++FE MLD G P+ + G AA ++K+ K G
Sbjct: 898 IDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV 957
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA-V 497
+ L Y +L+ L G+ L + E++ESG D Y +I GL +LE A V
Sbjct: 958 RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALV 1017
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
L E +G P Y+ L L + +E A ++ +I+ A
Sbjct: 1018 LFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 165/345 (47%), Gaps = 5/345 (1%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
N+SG A LF + K V + +YN+++ L + +V + G PD+
Sbjct: 764 NVSG-ARTLFEKFT-KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVA 821
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
T + ++D++ ++G++ + ++ + + + + N+V+ L + +V A L+ +
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDL 881
Query: 260 KGKVLFN--VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
F+ TY +I G SK G++ E +++ + ++ G P+ ++ LI G G+AG
Sbjct: 882 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
D A +F M ++G PD Y+ ++ VG DE + Y+K + P++ Y
Sbjct: 942 ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001
Query: 378 LISGLLKSRKVADALEVFEEM-LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+I+GL KS ++ +AL +F EM RGI P T S + L G A +Y + ++
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
G + ++ + L+R S GK ++ M G+ + YE
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYE 1106
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 165/361 (45%), Gaps = 9/361 (2%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ + ++ +YN ++ L R D + +M GV P T + +D + ++G
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
A++ +++ G+ + + N L+ L + A +F +K L + +TYN+
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
++ +SK+G++ E ++L E++ G PD + + LI L +A R+D+A ++F MKE
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P YN +++ G E ++ ++GM C PN T+ L L K+ +V AL
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 628
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
++ +M+D G VP T + + L G AM + + + KL + L L
Sbjct: 629 KMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK----KLVYPDFVTLCTLL 684
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGE----IYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
G K ++ D + + Y + +E +I + ++NAV E + G
Sbjct: 685 PGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGI 744
Query: 509 C 509
C
Sbjct: 745 C 745
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 169/376 (44%), Gaps = 1/376 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SYN ++ L + +F V M EG P L+T S +M + + + +L +
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
E GLK + + + + L + + A + M + +V+TY ++I ++
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ V +++ PD +T+ L++ +D + + M++ G PD + +
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTIL 369
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ G+F E M PN+ TY LI GLL+ ++ DALE+F M G+
Sbjct: 370 VDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV 429
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T F++ G +A+ ++K + G ++ A L L+ G+
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 489
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+++ +++ G D Y ++ +G+++ A+ ++ E + G P +V + L N L
Sbjct: 490 IFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLY 549
Query: 524 ASNKLESAYNLFRKIK 539
+++++ A+ +F ++K
Sbjct: 550 KADRVDEAWKMFMRMK 565
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/492 (22%), Positives = 204/492 (41%), Gaps = 85/492 (17%)
Query: 131 VVGKVVN---RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLS 187
VV ++N + + EA +F +K + V +YN ++ LG+ +
Sbjct: 540 VVNSLINTLYKADRVDEAWKMFMR--MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 597
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
M ++G P+ T + + D + +V A++ML ++ D G D + N +++ L +
Sbjct: 598 GMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNG 657
Query: 248 HVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEM--------------------E 287
V A F+ MK V + +T ++ G K + + E
Sbjct: 658 QVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWE 717
Query: 288 RVLKEIVAEGFSPDSLTFS--FLIEGLGRAG---------------RIDDAIEVFDTM-K 329
++ I+AE ++++FS + G+ R G + A +F+ K
Sbjct: 718 DLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTK 777
Query: 330 EKGCGPDTNAYNAVISN-----------------------------------YISVGDFD 354
+ G P YN +I Y G D
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID 837
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML-DRGIVPSTGTITSF 413
E + YK MS++ CE N T+ +ISGL+K+ V DAL+++ +++ DR P+ T
Sbjct: 838 ELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 897
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG---MLLDLWHEMQE 470
++ L G + A +++ GC+ + Y +L ++GFGK G L+ M +
Sbjct: 898 IDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL---INGFGKAGEADAACALFKRMVK 954
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G D + Y ++ LC +G+++ + +E G P + Y+ + N L S++LE
Sbjct: 955 EGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEE 1014
Query: 531 AYNLFRKIKIAR 542
A LF ++K +R
Sbjct: 1015 ALVLFNEMKTSR 1026
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 168/379 (44%), Gaps = 1/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y V++ AL + D V M PD T ++D F + Q
Sbjct: 292 DVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFW 351
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+E G D + +++ LC+ + G A + M+ + +L N+ TYN +I G ++
Sbjct: 352 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRV 411
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
++ + + + + G P + T+ I+ G++G A+E F+ MK KG P+ A
Sbjct: 412 HRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 471
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
NA + + G E + + G+ P+ TY ++ K ++ +A+++ EM++
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G P + S + L A M+ + +++ K ++ Y LL L GK
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
++L+ M + G P + + + LC ++ A+ ++ + + G P Y+ +
Sbjct: 592 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651
Query: 521 KLLASNKLESAYNLFRKIK 539
L+ + +++ A F ++K
Sbjct: 652 GLVKNGQVKEAMCFFHQMK 670
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 1/311 (0%)
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVV 284
+ L E+ N +L L + + +F+ M+ +++ + TY + S G +
Sbjct: 111 NLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLK 170
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ L+++ GF ++ +++ LI L ++ +A+EV+ M +G P Y++++
Sbjct: 171 QAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLM 230
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
D D M K M + +PN+ T+T I L ++ K+ +A E+ + M D G
Sbjct: 231 VGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCG 290
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P T T ++ LC+ A +++K + K Y LL R S +
Sbjct: 291 PDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQF 350
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
W EM++ G+ D + ++ LC G A ++ +G P+ Y+ L LL
Sbjct: 351 WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLR 410
Query: 525 SNKLESAYNLF 535
++L+ A LF
Sbjct: 411 VHRLDDALELF 421
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 183/437 (41%), Gaps = 51/437 (11%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA +F + +K + D +YN+++K + D +LS+M + G PD+ ++
Sbjct: 486 EAKQIF--YGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
++++ +A +V +A +M R+++ LK + N +L L + + A LF M K
Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
N +T+N + K +V ++L +++ G PD T++ +I GL + G++ +A+
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 663
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC--EPNMDTYTRLIS 380
F MK K PD ++ + ++ K YNC +P + LI
Sbjct: 664 CFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNF-LYNCADQPANLFWEDLIG 721
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH-----AAMMMYKKARK 435
+L + +A+ E ++ GI +I L P+ Y H A + K +
Sbjct: 722 SILAEAGIDNAVSFSERLVANGICRDGDSI---LVPIIRYSCKHNNVSGARTLFEKFTKD 778
Query: 436 VGCKLSLTAYKLLLRR--------------------------------LSGFGKCGM--- 460
+G + L Y LL+ L +GK G
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV-LVMEESLRKGFCPSRLVYSKLS 519
L +L+ EM ++ + VI+GL G +++A+ L + + F P+ Y L
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898
Query: 520 NKLLASNKLESAYNLFR 536
+ L S +L A LF
Sbjct: 899 DGLSKSGRLYEAKQLFE 915
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 39/224 (17%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PN A YN+++ G+ D C + M KEGV PDL+T S+++D G+V
Sbjct: 923 RPNCA----IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVD 978
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVIS 275
+ + L++ GL D V+ YN++I+
Sbjct: 979 EGLHYFKELKESGLNPD----------------------------------VVCYNLIIN 1004
Query: 276 GWSKLGQVVEMERVLKEI-VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G K ++ E + E+ + G +PD T++ LI LG AG +++A ++++ ++ G
Sbjct: 1005 GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLE 1064
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
P+ +NA+I Y G + Y+ M + PN TY +L
Sbjct: 1065 PNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 146/391 (37%), Gaps = 34/391 (8%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
+F + N+ ++ N +++AL + M V M K + D T + S
Sbjct: 104 YFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSL 163
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM 268
G + +A L ++ +FG + N
Sbjct: 164 SVKGGLKQAPYALRKMREFGF----------------------------------VLNAY 189
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
+YN +I K E V + ++ EGF P T+S L+ GLG+ ID + + M
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ G P+ + I G +E + K M C P++ TYT LI L +RK+
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A EVFE+M P T + L+ + + + K G + + +L
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTIL 369
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L G G D M++ G + Y +I GL + +L++A+ + G
Sbjct: 370 VDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV 429
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P+ Y + S SA F K+K
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMK 460
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 88/213 (41%), Gaps = 1/213 (0%)
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS-SYNCEPNMDTYTRLISGLLKS 385
+M K PD ++ V S D D Y+K ++ + N +T ++ L
Sbjct: 72 SMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVD 131
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
K+ + VF+ M R I T T + + L G A +K R+ G L+ +Y
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ L C ++++ M G+ + Y ++ GL +++ + +++E
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMET 251
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P+ ++ L + K+ AY + +++
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 284
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 193/398 (48%), Gaps = 7/398 (1%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
E+ + +F PN+ ++YN+++K +++ F +L M + + PD+ +
Sbjct: 133 AESFLAYFETVGILPNL----QTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYG 188
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KG 261
V++ +++G + A+++ + + GL D N+++ +R ++ + KG
Sbjct: 189 TVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKG 248
Query: 262 KVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
++ NV+TYN++I+G K+G+ E + + + D T+S LI GL G +D
Sbjct: 249 SCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDG 308
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A+EV+ M ++ D YNA+++ + G E + + M NC N+ +Y I
Sbjct: 309 AVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIR 367
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
GL ++RKV +A+ V+E + RG + T + LC G + A+ + K+A+ G KL
Sbjct: 368 GLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKL 427
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
AY ++ LS G+ L + H+M + G + +I G +LE A+
Sbjct: 428 DAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFF 487
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
E KG P+ + Y+ L N L + + AY+ +++
Sbjct: 488 REMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEM 525
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 169/379 (44%), Gaps = 34/379 (8%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
W + +V SYN+ ++ L + + +V + + G D T +++ +
Sbjct: 348 WVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKN 407
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYN 271
G + KA+++L +D G K DA Y+
Sbjct: 408 GHLNKALKILKEAKDGGDKLDA----------------------------------FAYS 433
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
++ G SK G+V E ++ ++ G + LI G RA ++++AI F M+ K
Sbjct: 434 SIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETK 493
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
GC P +YN +I+ F + + K M + +P+M TY+ L+ GL + +K+ A
Sbjct: 494 GCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMA 553
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
L ++ ++L +G+ P + LCS G A+++Y ++ C +L + L+
Sbjct: 554 LNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDG 613
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L +C M +W M ++G+ D Y + GLC+ G++ + + + +++L+ G P+
Sbjct: 614 LYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPT 673
Query: 512 RLVYSKLSNKLLASNKLES 530
+ + L +L L+S
Sbjct: 674 SITWYILVRAVLKLGPLDS 692
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 172/378 (45%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K V +V +YNV++ L + FD + M K DL T S ++ G
Sbjct: 246 VKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGN 305
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
V A+++ + + D + N +L C+ + + L+ M + NV++YNI
Sbjct: 306 VDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVVSYNIF 365
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
I G + +V E V + + G DS T+ LI GL + G ++ A+++ K+ G
Sbjct: 366 IRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGD 425
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
D AY++++ G DE + M Y CE + LI+G +++ K+ +A+
Sbjct: 426 KLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAIC 485
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
F EM +G P+ + + + LC A K+ + K + Y LL+ L
Sbjct: 486 FFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLC 545
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
K M L+LW ++ G D ++ ++ GLC+ G++E+A+L+ + P+ +
Sbjct: 546 QGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLV 605
Query: 514 VYSKLSNKLLASNKLESA 531
++ L + L + + E A
Sbjct: 606 THNTLMDGLYKARECEMA 623
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 135/291 (46%), Gaps = 4/291 (1%)
Query: 247 LHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKL-GQVVEMERVLKEIVAEGFSPDSLTF 305
+HV L + K K +V+ + SK+ + ++ + ++EI G P ++
Sbjct: 60 VHVTRIVELIKTQKCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIF--GCKPGIRSY 117
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ L+ A ++ A + G P+ YN +I + F E M S
Sbjct: 118 NALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWS 177
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
+ +P++ +Y +I+G++KS + ALEVF+EM +RG+VP ++ G
Sbjct: 178 KDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQ 237
Query: 426 AMMMYKKARKVGCKL-SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
++++ K C ++ Y +++ L G+ L++W M+++ D Y +I
Sbjct: 238 GKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLI 297
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
GLC++G ++ AV V +E +++ + Y+ L N + K++ ++ L+
Sbjct: 298 CGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELW 348
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 152/327 (46%), Gaps = 1/327 (0%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
G P+ +++M F + G V A + + GL+ S N ++ C+ V
Sbjct: 137 GYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEG 196
Query: 253 SSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
L M+ +V +V T++ +I+G K G++ E + E+ +G P+ +TF+ LI+G
Sbjct: 197 FRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDG 256
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
+ G++D A++ F M +G PD YNA+I+ VGD E + MS+ P+
Sbjct: 257 QCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPD 316
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
T+T LI G K + ALE+ M++ GI T + LC G H A M +
Sbjct: 317 RITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLR 376
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
G K Y +++ G M L EMQ G+ Y ++ GLC G
Sbjct: 377 DMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQG 436
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKL 518
Q++NA ++++ L G P+ + Y+ L
Sbjct: 437 QVKNAKMLLDAMLNVGVAPNDITYNIL 463
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 145/301 (48%), Gaps = 1/301 (0%)
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIV 294
NV++ C+ VG+A +F+ + + L V+++N +ISG K G V E R+ +
Sbjct: 145 FNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVME 204
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
+E PD TFS LI GL + GR+D+ +FD M KG P+ + +I G D
Sbjct: 205 SERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVD 264
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+K ++ M + P++ TY LI+GL K + +A + EM G+ P T T+ +
Sbjct: 265 LALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLI 324
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
+ C YG +A+ + ++ + G +L A+ +L+ L G+ + +M +G+
Sbjct: 325 DGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFK 384
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
D Y V+ C G + +++E G P + Y+ L N L ++++A L
Sbjct: 385 PDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKML 444
Query: 535 F 535
Sbjct: 445 L 445
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 1/269 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M E V PD+ T S +++ + G++ + + + GL + + V++ C+
Sbjct: 203 MESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGK 262
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
V A F M + V +++TYN +I+G K+G + E R++ E+ A G PD +TF+
Sbjct: 263 VDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTT 322
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI+G + G ++ A+E+ M E+G D A+ +IS G + + + M S
Sbjct: 323 LIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAG 382
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
+P+ TYT ++ K V ++ +EM G VP T + + LC G A
Sbjct: 383 FKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAK 442
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
M+ VG + Y +LL S G
Sbjct: 443 MLLDAMLNVGVAPNDITYNILLEGHSKHG 471
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 119/258 (46%), Gaps = 3/258 (1%)
Query: 284 VEMERVLK---EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
VE+ER E++ G+ P+ F+ L+ G + G + A VFD + ++G P ++
Sbjct: 121 VELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSF 180
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +IS G +E + M S P++ T++ LI+GL K ++ + +F+EM
Sbjct: 181 NTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCG 240
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G+VP+ T T ++ C G A+ ++ G + L Y L+ L G
Sbjct: 241 KGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKE 300
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L +EM SG D + +I G C G +E+A+ + + +G + ++ L +
Sbjct: 301 ARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLIS 360
Query: 521 KLLASNKLESAYNLFRKI 538
L ++ A + R +
Sbjct: 361 GLCRDGRVHDAERMLRDM 378
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 161/338 (47%), Gaps = 1/338 (0%)
Query: 161 KDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
D+ SYN ++K L K +D + ++ +M + G P++ T + ++ R G + +
Sbjct: 211 PDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEA 270
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSK 279
L ++ + G D ++ +C+ H A+ + + M L NV+ YN V+ G
Sbjct: 271 LSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCS 330
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
+ E E +L E+ E D +TF+ L++ + G +D IE+ + M E GC PD
Sbjct: 331 AERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVIT 390
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y VI+ + G DE + K MS+ C+PN +YT ++ GL ++ + DA E+ M+
Sbjct: 391 YTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMI 450
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
+G +P+ T + + +C G A+ + K+ GC L +Y ++ L GK
Sbjct: 451 QQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 510
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
L+L + M G + IY + + L G+ + +
Sbjct: 511 EALELLNVMINKGITPNTIIYSSMASALSREGRTDKII 548
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 173/383 (45%), Gaps = 5/383 (1%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNVA ++N ++ L R F+ + LS M + G PDL + ++D + G
Sbjct: 246 PNVA----TFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEV 301
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVIS 275
A +L R+ +GLK + N VL LC A L M + + +T+NI++
Sbjct: 302 ANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVD 361
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
+ + G V + +L++++ G PD +T++ +I G + G +D+A+ + M GC P
Sbjct: 362 FFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKP 421
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+T +Y V+ + + + M C PN T+ LI+ + K V A+E+
Sbjct: 422 NTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELL 481
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
++ML G P + ++ ++ L G A+ + G + Y + LS
Sbjct: 482 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSRE 541
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
G+ ++ ++ +Q++ SD +Y VI+ LC + + A+ + G P+ Y
Sbjct: 542 GRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 601
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
+ L L + + A +L ++
Sbjct: 602 TILIRGLASEGLVREAQDLLSEL 624
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 168/413 (40%), Gaps = 36/413 (8%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V + +Y IV++L R VL +M G +++++ R G A+
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGW 277
+ L L G D+ + N+V+ +C++ V L + ++++YN V+ G
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ ++E ++ E+V G P+ TF+ LI L R G + E M E GC PD
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL 283
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA------ 391
Y +I G + M SY +PN+ Y ++ GL + + +A
Sbjct: 284 RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 343
Query: 392 -----------------------------LEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
+E+ E+ML+ G +P T T+ + C G
Sbjct: 344 MFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGL 403
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A+M+ K GCK + +Y ++L+ L + +L M + G + +
Sbjct: 404 VDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNT 463
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+I +C G +E A+ ++++ L G P + YS + + L + K E A L
Sbjct: 464 LINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 516
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 36/276 (13%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D ++N++V + D + +L M + G PD+ T + V++ F + G V +A+ +L
Sbjct: 352 DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLL 411
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ G K + S +VL LC+ A L + M + L N +T+N +I+ K
Sbjct: 412 KNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKK 471
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP----- 335
G V + +LK+++ G SPD +++S +I+GLG+AG+ ++A+E+ + M KG P
Sbjct: 472 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIY 531
Query: 336 ------------------------------DTNAYNAVISNYISVGDFDECMKYYKGMSS 365
D YNAVIS+ + D + ++ M S
Sbjct: 532 SSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVS 591
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
C PN TYT LI GL V +A ++ E+ R
Sbjct: 592 NGCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 627
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 112/276 (40%), Gaps = 33/276 (11%)
Query: 267 VMTYNIVISGWSKLGQVVEMER----------------VLKEIVAEGFSPDSLTF----- 305
V+ YN +I+G+ + GQV R +++ + A G D+LT
Sbjct: 76 VVAYNAMIAGYCRAGQVAAARRLAAAVPVPPNAYTYFPIVRSLCARGLIADALTVLDEMP 135
Query: 306 -----------SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
++E R G A+ + KGC D+ N V+S G D
Sbjct: 136 LRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVD 195
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E ++ + + S+ CEP++ +Y ++ GL +++ D E+ EM+ G P+ T + +
Sbjct: 196 EGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLI 255
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
LC G + + GC L Y ++ + G + D+ M G
Sbjct: 256 AYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLK 315
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
+ Y V+ GLC+ + E A ++ E ++ CP
Sbjct: 316 PNVVCYNTVLKGLCSAERWEEAEDLLAEMFQED-CP 350
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 92/235 (39%), Gaps = 6/235 (2%)
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
S LI L AGR DA DT + AYNA+I+ Y G + +
Sbjct: 47 LSALIRSLCAAGRTADAARALDTAGDAA---GVVAYNAMIAGYCRAGQV---AAARRLAA 100
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
+ PN TY ++ L +ADAL V +EM RG + LE C G
Sbjct: 101 AVPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFR 160
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
+A+ + GC L L++ + G ++L ++ G D Y V+
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
GLC + ++ +M E +R G P+ ++ L L + E + ++
Sbjct: 221 KGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMP 275
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 181/373 (48%), Gaps = 3/373 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN+++ A R + M + G NP + T + V+++F + G V +A ++ L
Sbjct: 93 AYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGL 152
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
++ G +A N ++ + + A+ L+ M+ K + + +T+NI++SG K G+
Sbjct: 153 KEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGRE 212
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ +R+LK+I G PD F + GL AGR+D+A+E M EKG P A+N+V
Sbjct: 213 EDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSV 272
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I+ Y G D+ + YK M + P+ T + L+ GL + ++ +A E+ +M+++G+
Sbjct: 273 IAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGL 332
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+ T L+ G A ++ + + G + A+ + LS G +
Sbjct: 333 SVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYN 392
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR-KGFCPSRLVYSKLSNKL 522
++ EM G + Y +I G C G+L N L +E+ +R +G P + + L
Sbjct: 393 VFLEMLRKGLIPNNFAYNSLICGFCKCGKL-NEALKLEKVMRHRGLLPDIFTTNMIIGGL 451
Query: 523 LASNKLESAYNLF 535
++ SA N+F
Sbjct: 452 CKQGRMRSAINVF 464
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 163/386 (42%), Gaps = 36/386 (9%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ D+ + G P T S ++ F R G ++ +L + F + +A + N+V+ C
Sbjct: 43 LFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACC 102
Query: 245 QRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
R A + FN M + V+T+N VI+ + K G VVE ++ + GFSP+++
Sbjct: 103 IRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAI 162
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY---------------I 348
++ L+ G + ID A +++ M++KG PD +N ++S + I
Sbjct: 163 MYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDI 222
Query: 349 SV--------------------GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
SV G DE M++ M P++ + +I+ ++
Sbjct: 223 SVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLE 282
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A E ++ M+ G+ PS T +S L L G A + + + G ++ A+ +L
Sbjct: 283 DKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVL 342
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L + G LW EM+ G D + I GL G +E A V E LRKG
Sbjct: 343 LDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGL 402
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNL 534
P+ Y+ L KL A L
Sbjct: 403 IPNNFAYNSLICGFCKCGKLNEALKL 428
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 171/402 (42%), Gaps = 4/402 (0%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
V+ GN+ EA LF +K + + YN ++ + + D + +M
Sbjct: 132 VINAFCKEGNVV-EARKLF--DGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMR 188
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
K+G+ PD T +I++ + G+ ++L + GL D ++ + LC +
Sbjct: 189 KKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLD 248
Query: 251 AASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A M K L +++ +N VI+ +S+ G + K +V G +P T S L+
Sbjct: 249 EAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLL 308
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
GL GR+ +A E+ M EKG + A+ ++ + GD + M
Sbjct: 309 MGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIF 368
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P++ ++ I GL K V +A VF EML +G++P+ S + C G + A+ +
Sbjct: 369 PDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKL 428
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
K R G + +++ L G+ ++++ +M ++G D Y +I G C
Sbjct: 429 EKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCK 488
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
+ NA ++ G P Y+ + +S ++ A
Sbjct: 489 AFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRA 530
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 168/376 (44%), Gaps = 25/376 (6%)
Query: 154 IKHPNVAKDVKSYNVIVKA---LGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR 210
++ +A D ++N++V GR + D +L D++ G+ PD I +
Sbjct: 187 MRKKGIAPDGITFNILVSGHYKYGREEDGD---RLLKDISVLGLLPDRSLFDISVSGLCW 243
Query: 211 AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM-- 268
AG++ +A++ L + + GL + N V+ Q G F + K V F +
Sbjct: 244 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQ---AGLEDKAFEAYKLMVHFGLTPS 300
Query: 269 --TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
T + ++ G S G++ E ++ +++ +G S +++ F+ L++ + G + A ++
Sbjct: 301 PSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWG 360
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M+ +G PD A++A I G +E + M PN Y LI G K
Sbjct: 361 EMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCG 420
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
K+ +AL++ + M RG++P T + LC G +A+ ++ + G + Y
Sbjct: 421 KLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYN 480
Query: 447 LLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
L+ +G+ K +++ L + M SG D Y I G C+ ++ AVL+++E
Sbjct: 481 TLI---NGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDEL 537
Query: 504 LRKGF------CPSRL 513
+ G CP L
Sbjct: 538 VSAGILSFSFACPPTL 553
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 139/326 (42%), Gaps = 3/326 (0%)
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNI 272
++A+++LGR+ + G++ A + ++ L + G LF + +G T++
Sbjct: 3 FQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKY-TFSG 61
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G+ + G + E +L + P++ ++ +I GR DA+ F+ M E+G
Sbjct: 62 IILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERG 121
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
C P +N VI+ + G+ E K + G+ PN Y L++G +K R++ A
Sbjct: 122 CNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQAN 181
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
++EEM +GI P T + YG + K +G + + + + L
Sbjct: 182 MLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGL 241
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G+ ++ +M E G + VIA G + A + + G PS
Sbjct: 242 CWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSP 301
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKI 538
S L L + +L+ A L ++
Sbjct: 302 STCSSLLMGLSINGRLQEATELIGQM 327
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 151/328 (46%), Gaps = 3/328 (0%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVL--WCLCQRLHVG 250
G PD+ +++M + ++ +A + G + GL+ S N ++ +C L G
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279
Query: 251 AASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
F M+ +V +V TY+++I+G K GQ+ + ++ E+ G P+ +TF+ LI
Sbjct: 280 FRLKRF-MMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLIN 338
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
G GR D +E++ M KG PD YN +I+ VGD E K M+ +P
Sbjct: 339 GHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKP 398
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
+ TYT LI G K + ALE+ +EM+ GI T+ + C G A
Sbjct: 399 DKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTL 458
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
++ + G K Y +++ G L EMQ G+ Y ++ GLC
Sbjct: 459 REMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQ 518
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKL 518
GQ++NA ++++ L G P + Y+ L
Sbjct: 519 GQMKNANMLLDAMLNLGVVPDDITYNIL 546
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 173/370 (46%), Gaps = 7/370 (1%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
++V++ A +F + K + + + D ++ A +
Sbjct: 158 FSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEIL 217
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVV 284
D G D NV++ LC+ + A LF + + L V+++N +I+G+ K G +
Sbjct: 218 DCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLD 277
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ R+ + ++ PD T+S LI GL + G++DDA ++F M ++G P+ + +I
Sbjct: 278 QGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLI 337
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ + G D M+ Y+ M +P++ TY LI+GL K + +A ++ EM RG+
Sbjct: 338 NGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLK 397
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD- 463
P T T ++ C G +A+ + K+ K G +L A+ L+ SGF + G +++
Sbjct: 398 PDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALI---SGFCREGQVIEA 454
Query: 464 --LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
EM E+G D Y VI G C G ++ +++E G P + Y+ L N
Sbjct: 455 ERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNG 514
Query: 522 LLASNKLESA 531
L ++++A
Sbjct: 515 LCKQGQMKNA 524
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 172/420 (40%), Gaps = 51/420 (12%)
Query: 136 VNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVL--------- 186
+N +LS +++ FF W + + SY + L K ++L
Sbjct: 76 LNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGK 135
Query: 187 --------SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNV 238
S + G + S++M+++ +G AIQ + L+ S
Sbjct: 136 NSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSC-- 193
Query: 239 VLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
G + +M N+ W+ +EI+ G+
Sbjct: 194 ----------------------GYLFDRLMKLNLTSPAWA----------FYEEILDCGY 221
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
PD F+ L+ L + +I++A +F + ++G P ++N +I+ Y G+ D+ +
Sbjct: 222 PPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFR 281
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
+ M P++ TY+ LI+GL K ++ DA ++F EM DRG+VP+ T T+ + C
Sbjct: 282 LKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHC 341
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
G M +Y++ + G K + Y L+ L G L EM + G D
Sbjct: 342 VTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKF 401
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y +I G C G LE+A+ + +E +++G + ++ L + ++ A R++
Sbjct: 402 TYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREM 461
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 149/345 (43%), Gaps = 6/345 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA +LF I + V S+N ++ + D + M + V PD+ T S+
Sbjct: 243 EAQLLF--GEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSV 300
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
+++ + GQ+ A ++ + D GL + + ++ C ++ M K
Sbjct: 301 LINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKG 360
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
V +V+TYN +I+G K+G + E ++++ E+ G PD T++ LI+G + G ++ A+
Sbjct: 361 VKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESAL 420
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
E+ M ++G D A+ A+IS + G E + + M +P+ TYT +I G
Sbjct: 421 EIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGF 480
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K V ++ +EM G VP T L LC G A M+ +G
Sbjct: 481 CKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDD 540
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
Y +LL G K G D E G D Y +I L
Sbjct: 541 ITYNILLE---GHCKHGNREDFDKLQSEKGLVQDYGSYTSLIGDL 582
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 175/377 (46%), Gaps = 2/377 (0%)
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
K YN +++L R ++M V S + ++G+ PD T + ++ S+ + G + A +
Sbjct: 149 KCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRL 208
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQ 282
L + GL+ + + N ++ C+ + A LF M N +Y I+I G +
Sbjct: 209 LLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKC 268
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V E + + +G SP+ F+FLI GL ++GR+ DA +FD M + G P YNA
Sbjct: 269 VREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNA 328
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I Y +G ++ +K + M C P+ TY LI GL +K +A E+ + G
Sbjct: 329 MIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEG 387
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P+ T T+ + C A+ M K CKL L + L+ L +
Sbjct: 388 FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAK 447
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+L +E+ +G + Y +I G C G+++ A+ V++ R G P+ Y+ L L
Sbjct: 448 ELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGL 507
Query: 523 LASNKLESAYNLFRKIK 539
+ KL A L K++
Sbjct: 508 VKDKKLHKAMALLTKMQ 524
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 182/420 (43%), Gaps = 35/420 (8%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN ++K+ + + + G+ P+ T + ++ + R G++ KA +
Sbjct: 182 DTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLF 241
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
+ G + + S +++ LC+ V A LF MK NV + +ISG K
Sbjct: 242 LMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKS 301
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+V + + + G P +T++ +I G + GR++DA+++ + M++ GC PD Y
Sbjct: 302 GRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTY 361
Query: 341 NAVI----------------------------------SNYISVGDFDECMKYYKGMSSY 366
N +I + Y FD+ ++ M S
Sbjct: 362 NTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSS 421
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
C+ ++ + +LI+ L+K ++ +A E+ E+ G+VP+ T TS ++ C G A
Sbjct: 422 KCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIA 481
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ + K + GC+ + Y L+ L K + L +MQ+ G + Y ++ G
Sbjct: 482 LEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQG 541
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDY 546
C+ +NA + E + G P Y+ L++ L + + E AY+ + +A Y
Sbjct: 542 QCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVY 601
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 194/454 (42%), Gaps = 38/454 (8%)
Query: 81 NSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGN 140
NS+ + D + E LL E G+ + +I+ + VD++L+V+ K++ R
Sbjct: 435 NSLIKKDRLKEAKE-LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL-KMMERDG 492
Query: 141 LSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
A W +YN ++ L + K +L+ M K+G+ P++ T
Sbjct: 493 CQPNA------W------------TYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVIT 534
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
+ ++ A ++ +E GLK D + V+ LC+ A S F K
Sbjct: 535 YTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYS-FIVRK 593
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
G L V Y +I G+SK G +++ ++ EG +PDS T+S L+ L + R+++
Sbjct: 594 GVALTKVY-YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNE 652
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A+ + D M +G AY +I + G D + Y M+S +P+ TYT I+
Sbjct: 653 ALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFIN 712
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
K ++ DA ++ +M G+ P T ++ G A K+ C+
Sbjct: 713 SYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEP 772
Query: 441 SLTAYKLLLRRL--------SGFGKCGM--LLDL---WH---EMQESGYPSDGEIYEYVI 484
+ Y LLL+ L GM L++L W M + G Y +I
Sbjct: 773 NYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLI 832
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
AG C G+LE A L+++ KG P+ +Y+ L
Sbjct: 833 AGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLL 866
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 179/404 (44%), Gaps = 19/404 (4%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKAL---GR----RKFFDFMCNVLSDMAKEGVNP 196
EA+VLF +K + +V+++ ++ L GR R FD M + GV P
Sbjct: 271 EALVLFL--MMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFD-------AMPQNGVVP 321
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
+ T + ++ + + G++ A+++ +E G D + N +++ LC + A L
Sbjct: 322 SVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLN 381
Query: 257 NSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
N++K V+T+ +I+G+ + + R+ ++++ D F LI L +
Sbjct: 382 NAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKD 441
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
R+ +A E+ + + G P+ Y ++I Y G D ++ K M C+PN TY
Sbjct: 442 RLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYN 501
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
L+ GL+K +K+ A+ + +M GI+P+ T T+ L+ C A +++ +
Sbjct: 502 SLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQN 561
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G K AY +L L K G + + + G Y +I G G + A
Sbjct: 562 GLKPDEHAYAVLTDALC---KAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFA 618
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
++E + +G P YS L + L +L A + ++ +
Sbjct: 619 ATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL 662
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 178/416 (42%), Gaps = 38/416 (9%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HP D +YN ++ L +K + +L++ KEG P + T + +++ + A +
Sbjct: 355 HP----DDWTYNTLIYGLCDQKTEEAE-ELLNNAVKEGFTPTVVTFTNLINGYCMAEKFD 409
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVI 274
A++M ++ K D + ++ L ++ + A L N + L NV+TY +I
Sbjct: 410 DALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSII 469
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ K G+V VLK + +G P++ T++ L+ GL + ++ A+ + M++ G
Sbjct: 470 DGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGII 529
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY------------------- 375
P+ Y ++ DFD + ++ M +P+ Y
Sbjct: 530 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 589
Query: 376 -------------TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
T LI G K+ A + E M+D G P + T + L LC
Sbjct: 590 IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 649
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
+ A+ + + G K ++ AY +L+ + GK +++EM SG+ Y
Sbjct: 650 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTV 709
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
I C G+LE+A ++ + R+G P + Y+ L + ++ A++ +++
Sbjct: 710 FINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRM 765
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 180/400 (45%), Gaps = 11/400 (2%)
Query: 135 VVNRGNL-SGEAMVLFFNWAIKHPN------VAKDVKSYNVIVKALGRRKFFDFMCNVLS 187
VV NL +G M F+ A++ N D++ + ++ +L ++ +L+
Sbjct: 392 VVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLN 451
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
+++ G+ P++ T + ++D + ++G+V A+++L +E G + +A + N +++ L +
Sbjct: 452 EISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDK 511
Query: 248 HVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
+ A +L M K ++ NV+TY ++ G R+ + + G PD ++
Sbjct: 512 KLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYA 571
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
L + L +AGR ++A + + KG Y +I + G+ D + M
Sbjct: 572 VLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDE 628
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
C P+ TY+ L+ L K +++ +AL + ++M RGI + T ++ + G A
Sbjct: 629 GCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHA 688
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
MY + G K S T Y + + G+ DL +M+ G D Y +I G
Sbjct: 689 KRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDG 748
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
++G ++ A ++ + P+ Y L LL N
Sbjct: 749 CGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN 788
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 135/293 (46%), Gaps = 1/293 (0%)
Query: 246 RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
R+ A ++ + ++ + YN + ++ M RV ++V +G PD++T+
Sbjct: 127 RVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTY 186
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ +I+ + G + A F + E G P+T NA++ Y G+ + + M
Sbjct: 187 NTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPL 246
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
C+ N +YT LI GL +++ V +AL +F M G P+ T + LC G
Sbjct: 247 MGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGD 306
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A +++ + G S+ Y ++ S G+ L + M+++G D Y +I
Sbjct: 307 ARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIY 366
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GLC+ + E A ++ ++++GF P+ + ++ L N + K + A + K+
Sbjct: 367 GLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKM 418
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 166/374 (44%), Gaps = 17/374 (4%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y ++ + DF ++ M EG PD T S+++ + + ++ +A+ +L ++
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
G+K + +++ + + A ++N M + TY + I+ + K G++
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 721
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ E ++ ++ EG +PD +T++ LI+G G G ID A M C P+ Y ++
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 781
Query: 345 SNYI----------------SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ + ++ + D + + M + P + TY+ LI+G K+ ++
Sbjct: 782 KHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRL 841
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A + + M +G+ P+ T ++ C A+ + G + L +Y+LL
Sbjct: 842 EEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLL 901
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L G + L+ ++ E GY D ++ + GL G ++ ++ ++
Sbjct: 902 VVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYC 961
Query: 509 CPSRLVYSKLSNKL 522
C S Y+ ++NK+
Sbjct: 962 CISSQTYALVTNKM 975
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 142/352 (40%), Gaps = 71/352 (20%)
Query: 103 RGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKD 162
+GV L K+ +I+ N D + ++ ++++ G D
Sbjct: 593 KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG-------------------CTPD 633
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+Y+V++ AL ++K + +L M+ G+ + +I++D +R G+ A +M
Sbjct: 634 SYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYN 693
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+ G K A + V + C+ + A L M+ + V +V+TYNI+I G +G
Sbjct: 694 EMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMG 753
Query: 282 QV------------------------------------------------VEME---RVL 290
+ +E++ ++L
Sbjct: 754 YIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLL 813
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
+ +V G +P T+S LI G +AGR+++A + D M KG P+ + Y +I
Sbjct: 814 ERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDT 873
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
F++ + + MS +P +++Y L+ GL +F ++L+ G
Sbjct: 874 KFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELG 925
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 192/417 (46%), Gaps = 36/417 (8%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V +V + N+++ AL + + + + LSDM ++GV PD+ T + +++++ R G + +A
Sbjct: 93 VQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAF 152
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+++ + GLK + N ++ LC+ A + + M K + + TYNI++
Sbjct: 153 ELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVEC 212
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ +++ ER+ E+ ++G PD ++FS LI L + G +D A++ F MK G PD
Sbjct: 213 CRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDN 272
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y +I + G E +K M C ++ TY +++GL K + +++A E+F E
Sbjct: 273 VIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTE 332
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL-------- 449
M +RG+ P T T+ + G + A+ +++ + K + Y L+
Sbjct: 333 MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 392
Query: 450 -------------RRL-----------SGFGKCGMLLD---LWHEMQESGYPSDGEIYEY 482
RR+ +G+ G + + LW EM E G+ +
Sbjct: 393 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 452
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ G C G A + L KG P + Y+ L N + ++ A+ L K++
Sbjct: 453 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKME 509
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 181/387 (46%), Gaps = 1/387 (0%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+K + + + N ++ L + + D + ++ + GV ++ TL+I++++ +
Sbjct: 52 VLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQ 111
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN-VMTYN 271
++ L +E+ G+ D + N ++ C++ + A L +SM GK L V TYN
Sbjct: 112 KIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYN 171
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I+G K G+ + + VL E++ G SPD+ T++ L+ R + DA +FD M +
Sbjct: 172 AIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQ 231
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G PD +++A+I G D+ +KY++ M + P+ YT LI G ++ +++A
Sbjct: 232 GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEA 291
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
L+V +EML++G V T + L LC A ++ + + G + L+
Sbjct: 292 LKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLING 351
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
S G + L+ M + D Y +I G C ++E + + + + P+
Sbjct: 352 YSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 411
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y L N + A+ L+ ++
Sbjct: 412 HISYGILINGYCNMGCVSEAFRLWDEM 438
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 171/376 (45%), Gaps = 3/376 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D +YN+++ R + +M +GV PDL + S ++ + G + +A+
Sbjct: 198 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 257
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
+ +++ GL D +++ C+ + A + + M +G VL +V+TYN +++G
Sbjct: 258 KYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVL-DVVTYNTILNG 316
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K + E + + E+ G PD TF+ LI G + G ++ A+ +F+ M ++ PD
Sbjct: 317 LCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPD 376
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN +I + + ++ + + M S PN +Y LI+G V++A +++
Sbjct: 377 VVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWD 436
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
EM+++G + T + ++ C G A G Y L+
Sbjct: 437 EMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 496
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
L ++M+ SG D Y ++ G G+++ A L+M + + +G P R Y+
Sbjct: 497 NMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYT 556
Query: 517 KLSNKLLASNKLESAY 532
L N + N L+ A+
Sbjct: 557 SLINGHVTQNNLKEAF 572
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 154/353 (43%), Gaps = 1/353 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D+ S++ ++ L + D DM G+ PD +I++ F R G + +A+
Sbjct: 233 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 292
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
++ + + G D + N +L LC+ + A LF M + +F + T+ +I+G+
Sbjct: 293 KVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGY 352
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
SK G + + + + ++ PD +T++ LI+G + ++ E+++ M + P+
Sbjct: 353 SKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNH 412
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+Y +I+ Y ++G E + + M E + T ++ G ++ A E
Sbjct: 413 ISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSN 472
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
ML +GIVP T + + A + K G + Y ++L S G+
Sbjct: 473 MLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGR 532
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
+ +M E G D Y +I G L+ A V +E L++GF P
Sbjct: 533 MQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 585
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 181/401 (45%), Gaps = 8/401 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
E++VL + +P V ++++V+ + + C + +G+ + +
Sbjct: 14 ESLVLTYGNCGSNPLV------FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNS 67
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++ ++ G V A ++ + G++ + +LN+++ LC+ + S + M+ K
Sbjct: 68 LLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKG 127
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+F +V+TYN +I+ + + G + E ++ + +G P T++ +I GL + G+ A
Sbjct: 128 VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAK 187
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
V D M + G PDT YN ++ + + + + M S P++ +++ LI L
Sbjct: 188 GVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 247
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K+ + AL+ F +M + G+ P T + C G A+ + + + GC L +
Sbjct: 248 SKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDV 307
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y +L L +L+ EM E G D + +I G G + AV + E
Sbjct: 308 VTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEM 367
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
+++ P + Y+ L + +++E L+ + I+R+
Sbjct: 368 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDM-ISRR 407
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 82/150 (54%), Gaps = 1/150 (0%)
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
+M ++G + T + ++ + RAG KA + L + G+ D + N ++ +
Sbjct: 437 EMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 496
Query: 248 HVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
++ A +L N M+ +L +V+TYN++++G+S+ G++ E E ++ +++ G +PD T++
Sbjct: 497 NMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYT 556
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
LI G + +A V D M ++G PD
Sbjct: 557 SLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 1/182 (0%)
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
NC N + L+ +++RK+ + E F + +G+ S S L L G A
Sbjct: 22 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 81
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+Y++ + G ++++ +++ L K +M+E G D Y +I
Sbjct: 82 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 141
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK-IKIARQND 545
C G LE A +M+ KG P Y+ + N L + K A + + +KI D
Sbjct: 142 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 201
Query: 546 YA 547
A
Sbjct: 202 TA 203
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/481 (23%), Positives = 203/481 (42%), Gaps = 70/481 (14%)
Query: 128 SLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLS 187
S +VV V+ GN +F+ K ++ V ++ V++KAL D C +L
Sbjct: 202 SYNVVLDVLLAGNCPKVVPNVFYEMLSK--GISPTVYTFGVVMKALCLVNEVDSACALLK 259
Query: 188 DMAKEG--------------------VN---------------PDLETLSIVMDSFIRAG 212
DM + G VN PD+ T + + +
Sbjct: 260 DMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKML 319
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK--VLFN---- 266
++++A +++ R+ G ++ + V++ LC+ V A L N + VLFN
Sbjct: 320 RIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLIN 379
Query: 267 ---------------------------VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS 299
+ TYN +I G K G +V ++ E+ +G
Sbjct: 380 GYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCE 439
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P+ +T++ LI+ + GR+++A V D M KG + YN +IS + +
Sbjct: 440 PNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNM 499
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ MSS C+P++ T+ LI GL K K +AL ++++ML G++ +T T + +
Sbjct: 500 FGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLR 559
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
G A+ + GC L Y L++ L G L L+ +M G +
Sbjct: 560 RGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNIS 619
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I GLC G +++A+ + + + +G P + Y+ L N L + + + A NLF K++
Sbjct: 620 CNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQ 679
Query: 540 I 540
+
Sbjct: 680 V 680
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 197/454 (43%), Gaps = 48/454 (10%)
Query: 87 DSSRAVDEFLL----PEERLRGVFLQKLKGKGVIEDA------LWNVNVDLSLDVVGKVV 136
++++ VD LL P GV + L G +++A + N NV L ++ V
Sbjct: 323 EAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYV 382
Query: 137 NRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNP 196
+RG L V+ + ++ D+ +YN ++ L ++ + ++++M +G P
Sbjct: 383 SRGRLDEAKAVM--HESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEP 440
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
++ T +I++D F + G RLE+ A ++
Sbjct: 441 NVITYTILIDRFCKEG----------RLEE-------------------------ARNVL 465
Query: 257 NSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
+ M GK L N + YN +IS K +V + + ++ ++G PD TF+ LI GL +
Sbjct: 466 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 525
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
+ ++A+ ++ M +G +T YN +I ++ G E +K M C + TY
Sbjct: 526 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 585
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
LI L ++ + L +FE+M+ +G+ P+ + + LC G A+ +
Sbjct: 586 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 645
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
G + Y L+ L G+ L+L+ ++Q G D Y +I+ C G ++
Sbjct: 646 RGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDD 705
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
A L++ + GF P+ + + L + + E
Sbjct: 706 AHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/464 (21%), Positives = 180/464 (38%), Gaps = 87/464 (18%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV-------------- 194
F WA Y +++ LG F +L M +EG+
Sbjct: 115 LFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHY 174
Query: 195 ----------------------NPDLETLSIVMDSFIRAGQVYKAI-----QMLGRLEDF 227
P + ++V+D + AG K + +ML +
Sbjct: 175 GRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLL-AGNCPKVVPNVFYEMLSK---- 229
Query: 228 GLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEM 286
G+ + VV+ LC V +A +L M + + N + Y +I SK+G+V E+
Sbjct: 230 GISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEV 289
Query: 287 -----------------------------------ERVLKEIVAEGFSPDSLTFSFLIEG 311
+++ ++ GF+P+S T+ L+ G
Sbjct: 290 LKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHG 349
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY-YKGMSSYNCEP 370
L R G++D+A + + + P+ +N +I+ Y+S G DE ++ M S C P
Sbjct: 350 LCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGP 405
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
++ TY LI GL K + A E+ EM +G P+ T T ++ C G A +
Sbjct: 406 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 465
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
+ G L+ Y L+ L K L+++ +M G D + +I GLC +
Sbjct: 466 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 525
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
+ E A+ + ++ L +G + + Y+ L + L ++ A L
Sbjct: 526 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKL 569
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 1/236 (0%)
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
+ LI+ LG AG + MK++G + + ++ +Y G + + M
Sbjct: 131 VYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 190
Query: 364 SS-YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
Y+CEP +Y ++ LL VF EML +GI P+ T ++ LC
Sbjct: 191 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 250
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
+A + K + GC + Y+ L+ LS G+ +L L EM G D +
Sbjct: 251 VDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFND 310
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
I GLC + ++ A +++ L +GF P+ Y L + L K++ A L K+
Sbjct: 311 AIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV 366
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 207/486 (42%), Gaps = 49/486 (10%)
Query: 58 ELSDLFQISSHNSFPNVYKESRSNSVKRIDSS-RAVDEFLLPEERLRGVFLQKLKGKGVI 116
E+ +F++S+ + P S + V R D S R +DE + R+ +F + I
Sbjct: 28 EIVQMFRVSTPS--PEASNFSFNRKVLRRDPSVRTLDERFI---RILKIFKWGSDAEKAI 82
Query: 117 EDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRR 176
E + + VD L V +V++ ++ A + FF WA K + D +Y +++ L
Sbjct: 83 E--VLKLKVDHRL--VHQVLDI-DVEIRAKIQFFKWAGKRQHFQHDSTTYMALIRCLEES 137
Query: 177 KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESL 236
D M + DM + + S ++ +A V KA+
Sbjct: 138 GLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKAL------------------ 179
Query: 237 NVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMT-YNIVISGWSKLGQVVEMERVLKEIVA 295
S+F +KG+ T YN +I G ++ + EI +
Sbjct: 180 -----------------SVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICS 222
Query: 296 EG-FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
EG SPD++T+S LI G+ R D A +FD MKE G P Y +++ Y + +
Sbjct: 223 EGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVE 282
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
++ + M C P + TYT LI GL K +V DA +F ML G P I + +
Sbjct: 283 AALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLI 342
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE-MQESGY 473
L G A+ ++ K + C ++ Y +++ + LW E M+ +G
Sbjct: 343 NILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGI 402
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
Y +I G C ++E A+L++EE KGF P Y L + L + + E+A
Sbjct: 403 APSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANE 462
Query: 534 LFRKIK 539
LF+++K
Sbjct: 463 LFQELK 468
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 193/412 (46%), Gaps = 11/412 (2%)
Query: 134 KVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG 193
K++ + + +A+ +F+ + N V YN ++ L + + + +++ EG
Sbjct: 167 KILGKAKMVNKALSVFYQIKGRKCNPTATV--YNTLILMLMHEGHHEKIHELYNEICSEG 224
Query: 194 -VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
+PD T S ++ +F + + A ++ +++ GL + +L + V AA
Sbjct: 225 NCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAA 284
Query: 253 SSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
L MKGK V TY +I G K+G+V + + ++ +G PD + + LI
Sbjct: 285 LRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINI 344
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN-YISVGDFDECMKYYKGMSSYNCEP 370
LGRAGR++DA+++F M C P+ YN VI + S E +++ M + P
Sbjct: 345 LGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAP 404
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
+ TY LI G K+ +V AL + EEM ++G P S ++ L AA ++
Sbjct: 405 SSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELF 464
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGL 487
++ ++ + S Y ++++ FG CG L +DL+ EM++ G D Y +++G+
Sbjct: 465 QELKENCGRSSARVYAVMIKH---FGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGM 521
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G ++ A +M G P ++ + N L + + A +F K+K
Sbjct: 522 IRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMK 573
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 160/341 (46%), Gaps = 2/341 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K A V +Y ++K LG+ D ++ +M K+G PD+ ++ +++ RAG+
Sbjct: 291 MKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGR 350
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL-FNSMKGK-VLFNVMTYN 271
+ A+++ G+++ + + N V+ + + + ++L F MK + + TY
Sbjct: 351 LEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYA 410
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
I+I G+ K +V + +L+E+ +GF P + LI+ LGRA R + A E+F +KE
Sbjct: 411 ILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKEN 470
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
Y +I ++ + G + + + M C P++ TY L+SG++++ + +A
Sbjct: 471 CGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEA 530
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+ M + G P + L L G P A+ M+ K ++ +Y +L
Sbjct: 531 HSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSC 590
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
LS G M L EM+ G+ D Y ++ + + +
Sbjct: 591 LSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGKVDE 631
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 174/407 (42%), Gaps = 37/407 (9%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
+N N + D +Y+ ++ A G+ + +DF + +M + G++P + + ++ +
Sbjct: 216 LYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMY 275
Query: 209 IRAGQVYKAIQML-------------------------GRLEDF----------GLKFDA 233
+ +V A++++ GR++D G K D
Sbjct: 276 FKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDV 335
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISG-WSKLGQVVEMERVLK 291
+N ++ L + + A LF M + NV+TYN VI + E +
Sbjct: 336 VLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFE 395
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
++ A G +P S T++ LI+G + R++ A+ + + M EKG P AY ++I +
Sbjct: 396 KMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAK 455
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
++ + ++ + + Y +I +++DA+++F EM G P T
Sbjct: 456 RYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYN 515
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
+ + + G A + + R+ GC + ++ ++L L+ G ++++ +M+ES
Sbjct: 516 ALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKES 575
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
D Y +++ L G E A +M E KGF + YS +
Sbjct: 576 EIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSI 622
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 179/382 (46%), Gaps = 4/382 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +V ++N+++ L + L M G+ P + T + ++ + G++ A
Sbjct: 222 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGAR 281
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
++ ++ G + D ++ N +L +C G AS + MKG L + ++YNI+I G
Sbjct: 282 MIISEMKSKGFQPDLQTYNPILSWMCNE---GRASEVLREMKGIGLVPDSVSYNILIRGC 338
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
S G + E+V +G P T++ LI GL +I+ A + ++EKG D+
Sbjct: 339 SNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 398
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN VI+ Y GD + + M + +P TYT LI L + K +A E+FE+
Sbjct: 399 VTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEK 458
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
++ +G+ P + + ++ C+ G A + K+ ++ Y L+R L G GK
Sbjct: 459 VVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGK 518
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+L EM+ G D Y +I+G G ++A +V +E L GF P+ L Y+
Sbjct: 519 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNA 578
Query: 518 LSNKLLASNKLESAYNLFRKIK 539
L L + E A L R++K
Sbjct: 579 LLKGLSKNQDGELAEELLREMK 600
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 153/347 (44%), Gaps = 20/347 (5%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCN------VLSDMAK 191
RG + G M++ +K D+++YN I+ +MCN VL +M
Sbjct: 274 RGRIEGARMII---SEMKSKGFQPDLQTYNPILS---------WMCNEGRASEVLREMKG 321
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
G+ PD + +I++ G + A + G+ + N ++ L + A
Sbjct: 322 IGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEA 381
Query: 252 ASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A L ++ K ++ + +TYNIVI+G+ + G + + E++ +G P T++ LI
Sbjct: 382 AEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIY 441
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
L R + +A E+F+ + KG PD N ++ + + G+ D K M N +P
Sbjct: 442 VLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDP 501
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
+ TY L+ GL K +A E+ EM RGI P + + + G A ++
Sbjct: 502 DDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVR 561
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG-YPSD 476
+ +G +L Y LL+ LS + +L EM+ G P+D
Sbjct: 562 DEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPND 608
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 148/313 (47%), Gaps = 12/313 (3%)
Query: 107 LQKLKGKGVIEDAL-WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L+++KG G++ D++ +N+ ++ N G+L E + + +K V +
Sbjct: 316 LREMKGIGLVPDSVSYNI-------LIRGCSNNGDL--ETAFAYRDEMVKQGMVPT-FYT 365
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN ++ L + ++ ++ ++G+ D T +IV++ + + G KA + +
Sbjct: 366 YNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMM 425
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVV 284
G+K + +++ LC+R A LF + GK + +++ N ++ G G +
Sbjct: 426 TDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMD 485
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+LKE+ PD +T++ L+ GL G+ ++A E+ MK +G PD +YN +I
Sbjct: 486 RAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 545
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
S Y GD M S P + TY L+ GL K++ A E+ EM GIV
Sbjct: 546 SGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIV 605
Query: 405 PSTGTITSFLEPL 417
P+ + S +E +
Sbjct: 606 PNDSSFCSVIEAM 618
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 3/238 (1%)
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
++ F F++ + +D+AIE F MKEKG P T N ++S + + +Y
Sbjct: 156 TILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYA 215
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M + N+ T+ +I+ L K K+ A M GI P+ T + ++ G
Sbjct: 216 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRG 275
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
A M+ + + G + L Y +L + G+ +L EM+ G D Y
Sbjct: 276 RIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVL---REMKGIGLVPDSVSYN 332
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I G N G LE A +E +++G P+ Y+ L + L NK+E+A L R+I+
Sbjct: 333 ILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIR 390
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 119/314 (37%), Gaps = 43/314 (13%)
Query: 260 KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
K +LF+ M + + +L V E + +GF P + T + ++ L R RI+
Sbjct: 154 KSTILFDFM-----VRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIE 208
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
+A + M + +N +I+ G + + M S+ +P + TY L+
Sbjct: 209 NAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLV 268
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
G ++ A + EM +G P T L +C+ G A + ++ + +G
Sbjct: 269 QGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEG---RASEVLREMKGIGLV 325
Query: 440 LSLTAYKLLLRRLSGFG-------------KCGMLLDLW--------------------- 465
+Y +L+R S G K GM+ +
Sbjct: 326 PDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEIL 385
Query: 466 -HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
E++E G D Y VI G C G + A + +E + G P++ Y+ L L
Sbjct: 386 IREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCR 445
Query: 525 SNKLESAYNLFRKI 538
NK A LF K+
Sbjct: 446 RNKTREADELFEKV 459
>gi|218191356|gb|EEC73783.1| hypothetical protein OsI_08468 [Oryza sativa Indica Group]
Length = 616
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 159/315 (50%), Gaps = 11/315 (3%)
Query: 232 DAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLK 291
D N +L L + H G A+SL +++ + +V+TYN + GW ++ VL+
Sbjct: 164 DLPLFNSLLDALSKSRHAGKAASLVRALEQRFTPDVVTYNTLADGWCRVKDTSRALDVLR 223
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG-----CGPDTNAYNAVISN 346
+V G +P T++ +++G RAG++ A + F MK++G C PD +Y ++
Sbjct: 224 LMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHG 283
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
G ++ K + M+ C P++ TY LI + K V DA+ VF+ ML +G VP+
Sbjct: 284 LGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMLVKGYVPN 343
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
T T + LC G + + ++ + GC+ + Y +L+R L G+ LDL+
Sbjct: 344 VVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFE 403
Query: 467 EMQ--ESGYPSDGEIYEYVIAGLCNIGQLENAVL---VMEESLRKGFCPSRLVYSKLSNK 521
+M E P+ + Y +I+ + + E+ VL +++E + +G+ P R +++++ N
Sbjct: 404 KMSKGEECLPNQ-DTYNIIISAMFMRKRAEDMVLAARMVDEMVDRGYLPRRFMFNRVLNG 462
Query: 522 LLASNKLESAYNLFR 536
L+ + E + L R
Sbjct: 463 LMLTGNQELSRKLLR 477
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 125/254 (49%), Gaps = 10/254 (3%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA---- 217
DV +YN + R K +VL M + G+ P T +I++ F RAGQ+ A
Sbjct: 198 DVVTYNTLADGWCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFF 257
Query: 218 IQMLGR-LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVIS 275
+QM R +D K D S ++ L + A +F+ M K +V TYN +I
Sbjct: 258 LQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQ 317
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
K G V + V ++ +G+ P+ +T++ LI GL AG+ID +++ + MK GC P
Sbjct: 318 VICKKGNVEDAVTVFDGMLVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEP 377
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMS-SYNCEPNMDTYTRLISGLLKSRKVAD---A 391
YN +I G+ ++ + ++ MS C PN DTY +IS + ++ D A
Sbjct: 378 IVQTYNVLIRYLFEEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISAMFMRKRAEDMVLA 437
Query: 392 LEVFEEMLDRGIVP 405
+ +EM+DRG +P
Sbjct: 438 ARMVDEMVDRGYLP 451
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 117/285 (41%), Gaps = 47/285 (16%)
Query: 262 KVLFNVMTYNIVISGWSK---LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+V ++ +N ++ SK G+ + R L++ F+PD +T++ L +G R
Sbjct: 160 RVAQDLPLFNSLLDALSKSRHAGKAASLVRALEQ----RFTPDVVTYNTLADGWCRVKDT 215
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY-----KGMSSYNCEPNMD 373
A++V M E G P YN ++ + G ++ +G +C+P++
Sbjct: 216 SRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVV 275
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
+YT ++ GL + ++ A +VF+EM
Sbjct: 276 SYTTMVHGLGVAGQLEKARKVFDEMA---------------------------------- 301
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
K GC S+ Y L++ + G + ++ M GY + Y +I GLC+ G++
Sbjct: 302 -KEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMLVKGYVPNVVTYTVLIRGLCHAGKI 360
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ + ++E G P Y+ L L ++E +LF K+
Sbjct: 361 DRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEKM 405
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 106/250 (42%), Gaps = 10/250 (4%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDD-AIEVFDTM-KEKGCGPDTNAYNAVISNYISVGDFD 354
F+P TF L E L + R D A+ +F ++ + D +N+++
Sbjct: 125 AFTPR--TFPILFERLAVSQRRPDLAVRLFLSLHRSHRVAQDLPLFNSLLDALSKSRHAG 182
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ + + P++ TY L G + + + AL+V M++ GI P+ T L
Sbjct: 183 KAASLVRALEQ-RFTPDVVTYNTLADGWCRVKDTSRALDVLRLMVESGIAPTKTTYNIIL 241
Query: 415 EPLCSYGPPHAAMMMYKKARKVG-----CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
+ G A + + +K G CK + +Y ++ L G+ ++ EM
Sbjct: 242 KGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMA 301
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
+ G Y +I +C G +E+AV V + L KG+ P+ + Y+ L L + K++
Sbjct: 302 KEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMLVKGYVPNVVTYTVLIRGLCHAGKID 361
Query: 530 SAYNLFRKIK 539
L ++K
Sbjct: 362 RGLKLLERMK 371
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A V +YN +++ + ++ + V M +G P++ T ++++ AG++ + ++
Sbjct: 306 APSVATYNALIQVICKKGNVEDAVTVFDGMLVKGYVPNVVTYTVLIRGLCHAGKIDRGLK 365
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KG-KVLFNVMTYNIVISGW 277
+L R+++ G + ++ NV++ L + + LF M KG + L N TYNI+IS
Sbjct: 366 LLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISAM 425
Query: 278 ---SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
+ +V R++ E+V G+ P F+ ++ GL G
Sbjct: 426 FMRKRAEDMVLAARMVDEMVDRGYLPRRFMFNRVLNGLMLTG 467
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 196/475 (41%), Gaps = 102/475 (21%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ +F KH +V +Y V++ +L FD +L+ M ++G+ P + T +
Sbjct: 327 EALNMFKEMTEKH--CQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNA 384
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
++D + + G A+++L +E +A + N ++ C+ ++ A SL + M + K
Sbjct: 385 LIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERK 444
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ NV+TYNI+I G K G + ++L + G PD T+S I+ L + G +++A
Sbjct: 445 LQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEAR 504
Query: 323 EVFDTMKEK-----------------------------------GCGPDTNAYNAVISNY 347
+F+++KEK GC P++ YN++I Y
Sbjct: 505 SLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGY 564
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
+F E M + EP DTYT LI LLK + A ++F++ML G P
Sbjct: 565 CKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDV 624
Query: 408 GTITSFLEPLCSYGPPHAA---------------MMMY--------------------KK 432
T+F+ CS+G A M+Y K+
Sbjct: 625 FIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKR 684
Query: 433 ARKVGCKLSLTAYKLLLRRLSG-----------------------FGKC------GMLLD 463
+VGC+ S Y L++ LS F C LD
Sbjct: 685 MHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLD 744
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
L+ +M E G + Y I GLC +G LE A + + KG P+ +Y+ L
Sbjct: 745 LFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSL 799
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 170/377 (45%), Gaps = 1/377 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
++ YN+++ L R D M +V +M + V P++ TL+ +++ + + G V +A +
Sbjct: 169 LRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVS 228
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
++ GL D + ++ C+ +V AA+++F SM K L N ++Y +I G+ +
Sbjct: 229 KIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEAR 288
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+V E ++ ++ + P T++ +I L + GR +A+ +F M EK C P+ + Y
Sbjct: 289 RVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYT 348
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I + +FD+ K GM P++ TY LI G K A ALE+ M
Sbjct: 349 VLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESN 408
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
P+ T + C H AM + K + + ++ Y +L+ G G
Sbjct: 409 NCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSA 468
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L M ESG D Y I LC G +E A + E KG + ++YS L +
Sbjct: 469 YKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDG 528
Query: 522 LLASNKLESAYNLFRKI 538
K+ L K+
Sbjct: 529 YCKVGKVSDGRFLLDKM 545
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 176/389 (45%), Gaps = 7/389 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
I ++ D +Y ++ R K D + M +G + + + ++ F A +
Sbjct: 230 IVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARR 289
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
V +A+++ ++ + + V+++ LCQ A ++F M K NV TY +
Sbjct: 290 VDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTV 349
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I + + +++L ++ +G P +T++ LI+G + G A+E+ M+
Sbjct: 350 LICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNN 409
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
C P+ YN +I + + + M M +PN+ TY LI G K + A
Sbjct: 410 CSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAY 469
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
++ M + G+VP T + F++ LC G A +++ ++ G K + Y L +
Sbjct: 470 KLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTL---I 526
Query: 453 SGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
G+ K G + D L +M +G + Y +I G C + A L+++ +++
Sbjct: 527 DGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIE 586
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ Y+ L + LL ++ + A+++F ++
Sbjct: 587 PAADTYTILIDNLLKDDEFDQAHDMFDQM 615
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 163/405 (40%), Gaps = 65/405 (16%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N + + ++YN ++ R K ++L M + + P++ T +I++ + G + A
Sbjct: 409 NCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSA 468
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
++L + + GL D + +V + LC+R V A SLF S+K K + N + Y+ +I G
Sbjct: 469 YKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDG 528
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K+G+V + +L ++++ G P+S+T++ LI+G + +A + D M ++ P
Sbjct: 529 YCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPA 588
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA----- 391
+ Y +I N + +FD+ + M S P++ YT I ++ DA
Sbjct: 589 ADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLIC 648
Query: 392 ------------------------------LEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
+ + M + G PS T + ++ L +
Sbjct: 649 KMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAK 708
Query: 422 PPHA-----------------------------AMMMYKKARKVGCKLSLTAYKLLLRRL 452
P + ++ K + GC + Y + L
Sbjct: 709 PKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGL 768
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
G + L+ M+E G + +IY ++ C +G A+
Sbjct: 769 CKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAI 813
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 166/403 (41%), Gaps = 53/403 (13%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
NL + + FFNW + +V+S+ ++ L + N+ M K + D
Sbjct: 87 NLDPQTALAFFNWIGQKHGFKHNVQSHVSMLNILVPNGYLRIAENMRILMIK---STDSS 143
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
++ + +R+ M R++ F K N++L L + L + S++ M
Sbjct: 144 ENALFVLEMLRS--------MNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEM 195
Query: 260 -KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
V N+ T N +++G+ KLG VVE E + +IV G S D+ T++ LI G R +
Sbjct: 196 LDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNV 255
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
D A NA+ + M + C N +YT L
Sbjct: 256 DAA-------------------NAI----------------FLSMPNKGCLRNEVSYTNL 280
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I G ++R+V +AL++F +M + P+ T T + LC G A+ M+K+ + C
Sbjct: 281 IHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHC 340
Query: 439 KLSLTAYKLLLRRL---SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
+ ++ Y +L+ L S F +L+ M E G Y +I G C G +
Sbjct: 341 QPNVHTYTVLICSLCEDSNFDDAKKILN---GMLEKGLIPSVVTYNALIDGYCKKGLSAS 397
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
A+ ++ P+ Y++L + A +L K+
Sbjct: 398 ALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKM 440
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 124/303 (40%), Gaps = 15/303 (4%)
Query: 156 HPNVAKDVKSYNVIVKAL---GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
HP DV Y + A GR K + + + M +G+ PD ++ +D++ R G
Sbjct: 621 HP----DVFIYTAFIHAYCSHGRLKDAEVL---ICKMNAKGIMPDTMLYTLFIDAYGRFG 673
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNI 272
+ A +L R+ + G E CL + L + +S + L + + N
Sbjct: 674 SIDGAFGILKRMHEVG----CEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASND 729
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+ W ++ ++ + ++ G +P++ T+ I GL + G ++ A +FD MKEKG
Sbjct: 730 FSNCWRRVDYEFTLD-LFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKG 788
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ + YN+++ +G + E +++ M P++D+ L+ GL A
Sbjct: 789 QSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAK 848
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
VF L ++ L G ++ GC++ Y +L+
Sbjct: 849 RVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908
Query: 453 SGF 455
G
Sbjct: 909 DGI 911
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 82/181 (45%), Gaps = 1/181 (0%)
Query: 175 RRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
RR ++F ++ MA+ G P+ T + + G + A ++ +++ G + +
Sbjct: 735 RRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNED 794
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
N +L C CQ G A + M + + L ++ + +++ G G + +RV
Sbjct: 795 IYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSF 854
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+ ++ D + + LI+GL + G D ++F M+ +GC Y+ +I + + +
Sbjct: 855 LQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQEI 914
Query: 354 D 354
D
Sbjct: 915 D 915
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 203/438 (46%), Gaps = 6/438 (1%)
Query: 99 EERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPN 158
E ++ G L L G G ++ V+V L LD++ +V + + + +++F+ +
Sbjct: 113 EVKVDGGVLDVLVGIGCGRNS--EVSVKL-LDLLIQVFAKKLILEKCLMVFYKMV--NNG 167
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV++ N ++K L + + + V S M K + P + T + +MDS + G+V +A+
Sbjct: 168 LLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAV 227
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
++L + FG + S NV++ L + A L M L + TYN +I G+
Sbjct: 228 EVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGF 287
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K E + +E++ G P +T++ ++ L R GR+ DA D M + PD
Sbjct: 288 CKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDL 347
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+YN +I Y +G+F E + + + S N P++ TY LI G ++ + A + ++
Sbjct: 348 VSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDD 407
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ G+ P T T + C G A ++ + G K AY + G
Sbjct: 408 MIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGN 467
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+ EM+ G+P D Y +I GLC +G ++A ++++ +G P + Y+
Sbjct: 468 PSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTS 527
Query: 518 LSNKLLASNKLESAYNLF 535
+ + L S L A +F
Sbjct: 528 IIHAHLISGLLRKAEEVF 545
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 169/358 (47%), Gaps = 1/358 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN +++ +++ F+ ++ +M G P + T + +M S R G+V A + L +
Sbjct: 279 TYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVM 338
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
+ L D S N +++ + + A LF+ ++ K L +V+TYN +I G + G +
Sbjct: 339 VNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNL 398
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ + +++ G PD +TF+ L+ G + G + A E+FD M +G PD AY
Sbjct: 399 DIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTR 458
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I + +G+ + + M + P++ TY LI+GL K DA E+ ++M GI
Sbjct: 459 IVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGI 518
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
VP T TS + G A ++ K G S+ Y +L+ + G+
Sbjct: 519 VPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKK 578
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+ EMQ+ G + Y +I GLC ++ A + E KG P++ Y+ L N+
Sbjct: 579 YFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINE 636
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 156/388 (40%), Gaps = 19/388 (4%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FF W K PN + ++ I+ L + F V+ + V+ V+D
Sbjct: 71 FFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIEVKVDGG------VLDVL 124
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNV 267
+ G GR + +K L++++ ++L + +F M +L +V
Sbjct: 125 VGIG--------CGRNSEVSVKL----LDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDV 172
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
N V+ V E+E V ++ P +TF+ +++ + G + A+EV D
Sbjct: 173 RNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDV 232
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M+ GC P+ +YN +++ G+FD + + MS + + TY LI G K
Sbjct: 233 MRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEM 292
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+A ++ EML RG +P+ T + + LC G A L +Y
Sbjct: 293 FEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNT 352
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L+ S G L L+ E++ Y +I G C G L+ A + ++ ++ G
Sbjct: 353 LIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHG 412
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLF 535
CP + ++ L L A LF
Sbjct: 413 LCPDVVTFTILVRGFCQMGNLPMAKELF 440
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 111/248 (44%), Gaps = 36/248 (14%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +YNV++ L + FD ++ M EG+ PD T + ++ + + +G + KA ++
Sbjct: 486 DLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVF 545
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLG 281
+ +K + +V+TY ++I ++ G
Sbjct: 546 SDM----------------------------------LKKGIHPSVVTYTVLIHSYAVRG 571
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ ++ E+ +G SP+ +T++ LI GL + +D A +F M+ KG P+ Y
Sbjct: 572 RLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYT 631
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I+ ++ + + +K YK M +P+ T++ L+ L K K+ L + E L
Sbjct: 632 ILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRL--ENLPL 689
Query: 402 GIVPSTGT 409
IV T
Sbjct: 690 AIVEINST 697
>gi|414874000|tpg|DAA52557.1| TPA: hypothetical protein ZEAMMB73_743775 [Zea mays]
Length = 630
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 193/401 (48%), Gaps = 12/401 (2%)
Query: 149 FFNWAI-KHPNVAKDVKSYNVIVKALGRRK-------FFDFMCNVLSDMAKE-GVNPDLE 199
FF +I + P + + S+N+++K + + +L D+ + PD
Sbjct: 139 FFTHSILRFPGLTPTLLSFNLLLKCICSSMVPRNPGLYLAVALGILHDVIPAWNLVPDKF 198
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
T S V+ + AG V +A+ ++ + G+ AE+ N VL + + V A LF M
Sbjct: 199 TYSTVVSALADAGCVEEAVALVHEMVVDGV-VSAEAFNPVLKAMLRAGDVNGAVKLFRFM 257
Query: 260 KGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+ K +TYN+++ G G+ +++ + EG P +T+ +++GL + GR+
Sbjct: 258 QLKGCTLTAVTYNVLLHGLLLCGEARAAMNIMRRMENEGIVPGLMTYGAVVDGLVKCGRV 317
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
+DA +V M +G P ++AVI+ + G+ D + ++ M + +PN+ Y+ +
Sbjct: 318 EDAWKVAQEMGGQGLAPSEFVFSAVITGFCKSGEVDRALMVWETMVAARVKPNVVLYSAM 377
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I G +S ++ +A ++FEEM+D +P+ T +S + A+ +++ KVGC
Sbjct: 378 IDGFARSGRMTEAEKLFEEMVDAKCIPNIVTYSSMVRGYFHIANSSRALSTWEEMIKVGC 437
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ +Y +L+ L G+ + +W M G D Y ++ GLC G ++ +
Sbjct: 438 VPTAISYSILISGLCDVGRLKDAMMVWKNMIGRGCAPDTIAYTSMMKGLCMSGMVDGGLR 497
Query: 499 VMEESLRKGFC-PSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ + L KG P + Y+ L + L+ +N L A +L ++
Sbjct: 498 LFNDMLAKGDAKPDVISYNVLLDALIRTNDLPRAMDLLNQM 538
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 194/455 (42%), Gaps = 61/455 (13%)
Query: 2 AFLSRFYRTRYPLSSLSSSF--SLFSFSTSVRSNLSYNELLSNQKKNMSSLDEHHVLKEL 59
+F S R PL L + F S+ F + LS+N LL +M + L
Sbjct: 121 SFNSALLRFPLPLHLLPAFFTHSILRFPGLTPTLLSFNLLLKCICSSMVPRNPGLYLAVA 180
Query: 60 SDLFQ--ISSHNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIE 117
+ I + N P+ K + S V + + V+E + + ++ GV+
Sbjct: 181 LGILHDVIPAWNLVPD--KFTYSTVVSALADAGCVEEAV--------ALVHEMVVDGVVS 230
Query: 118 DALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRK 177
+N V+ ++ G+++G A+ LF +K +YNV++ L
Sbjct: 231 AEAFN-------PVLKAMLRAGDVNG-AVKLFRFMQLK--GCTLTAVTYNVLLHGLLLCG 280
Query: 178 FFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLN 237
N++ M EG+ P L T V+D ++ G+V A ++ + GL +
Sbjct: 281 EARAAMNIMRRMENEGIVPGLMTYGAVVDGLVKCGRVEDAWKVAQEMGGQGLAPSEFVFS 340
Query: 238 VVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAE 296
V+ C+ V A ++ +M +V NV+ Y+ +I G+++ G++ E E++ +E+V
Sbjct: 341 AVITGFCKSGEVDRALMVWETMVAARVKPNVVLYSAMIDGFARSGRMTEAEKLFEEMVDA 400
Query: 297 -----------------------------------GFSPDSLTFSFLIEGLGRAGRIDDA 321
G P ++++S LI GL GR+ DA
Sbjct: 401 KCIPNIVTYSSMVRGYFHIANSSRALSTWEEMIKVGCVPTAISYSILISGLCDVGRLKDA 460
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM-SSYNCEPNMDTYTRLIS 380
+ V+ M +GC PDT AY +++ G D ++ + M + + +P++ +Y L+
Sbjct: 461 MMVWKNMIGRGCAPDTIAYTSMMKGLCMSGMVDGGLRLFNDMLAKGDAKPDVISYNVLLD 520
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
L+++ + A+++ +MLD+ P T T FL
Sbjct: 521 ALIRTNDLPRAMDLLNQMLDQMCDPDTITCNIFLR 555
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 44/254 (17%)
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
I A PD T+S ++ L AG +++A+ + M G A+N V+ + GD
Sbjct: 188 IPAWNLVPDKFTYSTVVSALADAGCVEEAVALVHEMVVDGVV-SAEAFNPVLKAMLRAGD 246
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
+ +K ++ M C TY L+ GLL + A+ + M + GIVP
Sbjct: 247 VNGAVKLFRFMQLKGCTLTAVTYNVLLHGLLLCGEARAAMNIMRRMENEGIVPG------ 300
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
L +YG + G KCG + D W QE G
Sbjct: 301 ----LMTYG----------------------------AVVDGLVKCGRVEDAWKVAQEMG 328
Query: 473 ----YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
PS+ ++ VI G C G+++ A++V E + P+ ++YS + + S ++
Sbjct: 329 GQGLAPSE-FVFSAVITGFCKSGEVDRALMVWETMVAARVKPNVVLYSAMIDGFARSGRM 387
Query: 529 ESAYNLFRKIKIAR 542
A LF ++ A+
Sbjct: 388 TEAEKLFEEMVDAK 401
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 94/225 (41%), Gaps = 49/225 (21%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
++ ++ + D V M V P++ S ++D F R+G++ +A ++
Sbjct: 339 FSAVITGFCKSGEVDRALMVWETMVAARVKPNVVLYSAMIDGFARSGRMTEAEKL----- 393
Query: 226 DFGLKFDAESL-NVVLWCLCQR--LHVGAASSLFNS----MKGKVLFNVMTYNIVISGWS 278
F DA+ + N+V + R H+ +S ++ +K + ++Y+I+ISG
Sbjct: 394 -FEEMVDAKCIPNIVTYSSMVRGYFHIANSSRALSTWEEMIKVGCVPTAISYSILISGLC 452
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG------ 332
+G++ + V K ++ G +PD++ ++ +++GL +G +D + +F+ M KG
Sbjct: 453 DVGRLKDAMMVWKNMIGRGCAPDTIAYTSMMKGLCMSGMVDGGLRLFNDMLAKGDAKPDV 512
Query: 333 ------------------------------CGPDTNAYNAVISNY 347
C PDT N + +
Sbjct: 513 ISYNVLLDALIRTNDLPRAMDLLNQMLDQMCDPDTITCNIFLREF 557
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 129/529 (24%), Positives = 237/529 (44%), Gaps = 43/529 (8%)
Query: 24 FSFSTSVRSNL-SYNELLSNQKKNMSSL----DEHHVLKELSDLFQISSHNSF---PNVY 75
F ST+ NL + NE S+ K L EH + L I++ SF P Y
Sbjct: 20 FVLSTNPVPNLKAENEEKSSVLKEADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTY 79
Query: 76 KESRSNSVKRIDSSRAVD--EFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVG 133
+ ++++ S R +D ++LL + +L G+ + DL + V+G
Sbjct: 80 QMM----IEKLASEREMDCVQYLLQQMKLEGISCSE----------------DLFISVIG 119
Query: 134 KVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG 193
R S +A+ F+ ++ V VK YN I+ AL F + + S+M K+G
Sbjct: 120 SY-RRAGSSEQALKTFYR--MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDG 176
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAAS 253
+ P++ T +I++ + + +V A ++L + G D S ++ LC+ V A
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAR 236
Query: 254 SLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
L S +V YN +I+G K E ++L E++ +G P+ ++++ +I L
Sbjct: 237 ELAMSFTP----SVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALS 292
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
AG ++ ++ V M +GC P+ + + ++I + G E + ++ M PN+
Sbjct: 293 DAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVV 352
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
Y L+ GL R + DA+ VF +M G P+ T ++ ++ G A ++
Sbjct: 353 AYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWM 412
Query: 434 RKVGCKLSLTAYKLL---LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
GC ++ AY + L R S F + L++ MQ P + + I GLC
Sbjct: 413 ITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIE---NMQVENCPPNTVTFNTFIKGLCGS 469
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G+++ A+ V ++ G P+ Y++L + LL + A+ L + ++
Sbjct: 470 GRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDME 518
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 177/401 (44%), Gaps = 8/401 (1%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V YN ++ + + F+ +L +M +G++P++ + + ++++ AG V ++ +L
Sbjct: 246 VPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLA 305
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLG 281
++ G + + ++ + A ++ M + V+ NV+ YN ++ G
Sbjct: 306 KMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKR 365
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ + V ++ G P+ T+S LI+G +AG +D A EV++ M GC P+ AY
Sbjct: 366 SLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYT 425
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++ F++ + M NC PN T+ I GL S +V A++VF++M +
Sbjct: 426 CMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNS 485
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G P+T T L+ L A + K G +L+L Y ++ G G
Sbjct: 486 GCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEA 545
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+L +M G D VI C G++ A+ +M+ + P + Y+ L +
Sbjct: 546 LELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISG 605
Query: 522 LLASNKLESAYNLFRKI-------KIARQNDYARRLWRSKG 555
+ +E A R++ +A N R L+ + G
Sbjct: 606 ICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMG 646
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 127/262 (48%), Gaps = 10/262 (3%)
Query: 139 GNLSGEAMVLFFNWAIKH---PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
G+L G + V +NW I H PNV +Y +V L R F+ ++ +M E
Sbjct: 400 GDLDGASEV--WNWMITHGCHPNVV----AYTCMVDVLCRNSMFNQAYCLIENMQVENCP 453
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P+ T + + +G+V AI++ ++ + G + + N +L L + G A L
Sbjct: 454 PNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGL 513
Query: 256 FNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
M+ + + N++TYN +I G+ G + E +L ++V G PD++T + +I+ +
Sbjct: 514 VKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCK 573
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G+++ AI++ D + PD AY ++IS + +E + Y + M S PN+ T
Sbjct: 574 QGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVAT 633
Query: 375 YTRLISGLLKSRKVADALEVFE 396
+ L+ L + + A++ +
Sbjct: 634 WNVLVRHLFSNMGHSGAVQFLD 655
>gi|115447913|ref|NP_001047736.1| Os02g0679200 [Oryza sativa Japonica Group]
gi|50253128|dbj|BAD29374.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537267|dbj|BAF09650.1| Os02g0679200 [Oryza sativa Japonica Group]
Length = 491
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 164/331 (49%), Gaps = 17/331 (5%)
Query: 232 DAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLK 291
D N +L L + H G A+SL +++ + +V+TYN + GW ++ VL+
Sbjct: 164 DLPLFNSLLDALSKSRHAGKAASLVRALEQRFTPDVVTYNTLADGWCRVKDTSRALDVLR 223
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG-----CGPDTNAYNAVISN 346
+V G +P T++ +++G RAG++ A + F MK++G C PD +Y ++
Sbjct: 224 LMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHG 283
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
G ++ K + M+ C P++ TY LI + K V DA+ VF+ M +G VP+
Sbjct: 284 LGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMRVKGYVPN 343
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
T T + LC G + + ++ + GC+ + Y +L+R L G+ LDL+
Sbjct: 344 VVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFE 403
Query: 467 EMQ--ESGYPSDGEIYEYVIAGLCNIGQLENAVL---VMEESLRKGFCPSRLVYSKLSNK 521
+M E P+ + Y +I+ + + E+ VL ++EE + +G+ P R +++++ N
Sbjct: 404 KMSKGEECLPNQ-DTYNIIISAMFMRKRAEDMVLAARMVEEMVDRGYLPRRFMFNRVLNG 462
Query: 522 LLASNKLESAYNLFRKIKIARQNDYARRLWR 552
L+ + E + L R Q Y RRL R
Sbjct: 463 LMLTGNQELSRKLLRM-----QEKY-RRLQR 487
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 127/260 (48%), Gaps = 8/260 (3%)
Query: 145 AMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIV 204
A+ LF + H VA+D+ +N ++ AL + + +++ + ++ PD+ T + +
Sbjct: 148 AVRLFLSLHRSH-RVAQDLPLFNSLLDALSKSRHAGKAASLVRAL-EQRFTPDVVTYNTL 205
Query: 205 MDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-- 262
D + R +A+ +L + + G+ + N++L + + A F MK +
Sbjct: 206 ADGWCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGS 265
Query: 263 ----VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+V++Y ++ G GQ+ + +V E+ EG +P T++ LI+ + + G +
Sbjct: 266 KDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNV 325
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
+DA+ VFD M+ KG P+ Y +I G D +K + M + CEP + TY L
Sbjct: 326 EDAVTVFDGMRVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVL 385
Query: 379 ISGLLKSRKVADALEVFEEM 398
I L + ++ L++FE+M
Sbjct: 386 IRYLFEEGEMEKGLDLFEKM 405
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 177/381 (46%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ DV +Y+ +++A + + + V+ +M + G + ++ T + ++ RAG + +A
Sbjct: 239 ISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAF 298
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGW 277
+ED+GL D + ++ LC+R A L + M ++ NV+ Y+ +I G+
Sbjct: 299 GYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGF 358
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G E +++KE+ A G P+ +T+ LI GL + GR+ A + M + G DT
Sbjct: 359 MRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADT 418
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN VI ++ + +E M PN+ TY+ +I+GL + + A + E+
Sbjct: 419 MTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQ 478
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ G+ P+ + C G A KK + L Y L+ LS GK
Sbjct: 479 MIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGK 538
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
++ + EM E G+ + Y +I G G LE A ++ + L G P+ +Y++
Sbjct: 539 MDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQ 598
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ S+ LE + + +
Sbjct: 599 ILEGYFKSDNLEKVSSTLKSM 619
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 158/375 (42%), Gaps = 36/375 (9%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y+ +++ L + +L M K G D T ++V++ +R +A +L +
Sbjct: 385 TYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEM 444
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQV 283
G+ + + ++++ LCQ AS L M L N Y +ISG+ + G
Sbjct: 445 RKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSF 504
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
LK++ E +PD ++ LI GL G++D+AIE +D M EKG P+ Y +
Sbjct: 505 SLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGL 564
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I Y G+ ++ + M + PN Y +++ G KS + + ML++G+
Sbjct: 565 IHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGL 624
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+P Y +++ LS G +
Sbjct: 625 MPDN-----------------------------------RLYGIVIHNLSSSGHMQAAVS 649
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ ++++G D IY +I+G C +E AV +++E +KG P Y+ L +
Sbjct: 650 VLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFC 709
Query: 524 ASNKLESAYNLFRKI 538
S+ + A N+F I
Sbjct: 710 KSDDISHARNIFNSI 724
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 160/375 (42%), Gaps = 2/375 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y ++ R F C L M +E + PDL + ++ G++ +AI+ +
Sbjct: 491 YAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEML 550
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVV 284
+ G + + + ++ ++ A L + M L N Y ++ G+ K +
Sbjct: 551 EKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLE 610
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
++ LK ++ +G PD+ + +I L +G + A+ V +++ G PD+ Y ++I
Sbjct: 611 KVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLI 670
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
S + D ++ + M+ EP + Y LI G KS ++ A +F ++ +G+
Sbjct: 671 SGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLP 730
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P+ T T+ ++ C G A+ +Y + G Y +L S G L +
Sbjct: 731 PNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFI 790
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
EM GY + ++ G C G+L+ V + + K PS L + L
Sbjct: 791 TEEMIARGYAIISS-FNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGE 849
Query: 525 SNKLESAYNLFRKIK 539
+ KL A+ +F +++
Sbjct: 850 AGKLSEAHTIFVELQ 864
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 146/353 (41%), Gaps = 36/353 (10%)
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
G +E G+ D + + ++ C+ + +A + M+ NV+TYN +I G +
Sbjct: 232 GFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRA 291
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + E KE+ G PD T+ +I GL + GR D A + D M G P+ Y
Sbjct: 292 GAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVY 351
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +I ++ G+ DE K K MS+ +PN TY LI GL K ++ A + ++M
Sbjct: 352 STLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTK 411
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G + T T +E A ++ + RK G ++ Y +++ L G+
Sbjct: 412 IGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESER 471
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLC-------------------------------- 488
L +M G + +Y +I+G C
Sbjct: 472 ASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLII 531
Query: 489 ---NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
N+G+++ A+ +E L KGF P+ Y L + + LE A L ++
Sbjct: 532 GLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQM 584
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 154/321 (47%), Gaps = 3/321 (0%)
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
L +++D++ + G+V +++ ++D GL N +L L + + + M
Sbjct: 175 VLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFM 234
Query: 260 KGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+G + +V TY+ +I + K+ + ++V++E+ G S + +T++ LI GL RAG I
Sbjct: 235 EGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAI 294
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
++A M++ G PD Y A+I+ G D+ MS PN+ Y+ L
Sbjct: 295 EEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTL 354
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I G ++ +A ++ +EM G+ P+ T + + LC G A + K+ K+G
Sbjct: 355 IDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGY 414
Query: 439 KLSLTAYKLLLR-RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
Y L++ L K L L +EM++ G + Y +I GLC IG+ E A
Sbjct: 415 MADTMTYNLVIEGHLRQHNKEEAFL-LLNEMRKGGISPNVYTYSIIINGLCQIGESERAS 473
Query: 498 LVMEESLRKGFCPSRLVYSKL 518
++E+ + G P+ VY+ L
Sbjct: 474 GLLEQMIADGLKPNAFVYAPL 494
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 155/354 (43%), Gaps = 7/354 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ +V +Y++I+ L + + +L M +G+ P+ + ++ + R G A
Sbjct: 449 ISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLAC 508
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
+ L ++ L D N ++ L + A ++ M K N TY +I G+
Sbjct: 509 ETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGY 568
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
S G + + E++L +++ G +P+ ++ ++EG ++ ++ +M EKG PD
Sbjct: 569 SMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDN 628
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y VI N S G + + P+ Y LISG K+ + A+ + +E
Sbjct: 629 RLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDE 688
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M +GI P + ++ C A ++ G + Y L + G+ K
Sbjct: 689 MAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTL---IDGYCK 745
Query: 458 CGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
G + +DL++EM G D +Y + AG N G L+ A+ + EE + +G+
Sbjct: 746 AGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGY 799
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 120/269 (44%)
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
++++ + K G+V + V+ + G +P + L++ L RA +D +V M+
Sbjct: 177 DVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEG 236
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
G PD Y+ +I Y V D + K + M C N+ TY LI GL ++ + +
Sbjct: 237 AGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEE 296
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A +EM D G+VP T + + LC G P A + + G ++ Y L+
Sbjct: 297 AFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLID 356
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
G + EM +G + Y+ +I GLC +G++ A ++++ + G+
Sbjct: 357 GFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMA 416
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ Y+ + L + E A+ L +++
Sbjct: 417 DTMTYNLVIEGHLRQHNKEEAFLLLNEMR 445
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 136/285 (47%), Gaps = 14/285 (4%)
Query: 79 RSNSVKRIDSS--RAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVV 136
+S++++++ S+ +++ L+P+ RL G+ + L G ++ A+ ++V +V +
Sbjct: 605 KSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSL 664
Query: 137 NRGNL-SG--------EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLS 187
G+L SG +A+ L A K + + YN ++ + N+ +
Sbjct: 665 IYGSLISGFCKAADMEKAVGLLDEMAKK--GIEPGISCYNALIDGFCKSDDISHARNIFN 722
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
+ +G+ P+ T + ++D + +AG + AI + + G+ DA +V+
Sbjct: 723 SIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSG 782
Query: 248 HVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ A + M + + ++N ++ G+ K G++ E + L ++ + P LT
Sbjct: 783 DLQQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVEN 842
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGP-DTNAYNAVISNYISVG 351
++ GLG AG++ +A +F +++K DT+ +++ ++ I+ G
Sbjct: 843 IVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQG 887
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%)
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
GI P T ++ +E C +A + ++ R+ GC L++ Y L+ L G
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEA 297
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
EM++ G DG Y +I GLC G+ + A +++E G P+ +VYS L +
Sbjct: 298 FGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDG 357
Query: 522 LLASNKLESAYNLFRKIKIA 541
+ + A+ + +++ A
Sbjct: 358 FMRQGNADEAFKIVKEMSAA 377
>gi|255661032|gb|ACU25685.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 373
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 175/366 (47%), Gaps = 43/366 (11%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM---LGRLEDFGLKFDAESLNVVLW 241
V +MA+ V+PD + +++ F RAG++ I++ +GR ED + S N+++
Sbjct: 12 VYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGR-ED---SQNVVSFNIMMR 67
Query: 242 CLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
L V A S++ M + + + TY I++ G+ K G + + RVL +G
Sbjct: 68 GLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGIAEEKGGVL 127
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
D+ +S +I GL + ++D+A+ V + M + G P+ + YN +I+ ++ V FD+ ++ +
Sbjct: 128 DAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSKFDDAIRVF 187
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT----------- 409
+ M S NC P + TY LI+GL K + A+A ++ +EML++G P T
Sbjct: 188 REMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQG 247
Query: 410 -------------ITSFLEP-----------LCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
I++ L+P LCS G A+M+Y + C +L +
Sbjct: 248 HKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTH 307
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ G L +W + +G D Y + GLC+ ++ A+L ++++L
Sbjct: 308 NTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALA 367
Query: 506 KGFCPS 511
K PS
Sbjct: 368 KKIAPS 373
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 146/318 (45%), Gaps = 36/318 (11%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
W + +++V S+N++++ L D ++ M + G D T I++D F +
Sbjct: 48 WELMGREDSQNVVSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKN 107
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG---------- 261
G + K++++LG E+ G DA + + ++ LC+ + A S+ N M
Sbjct: 108 GYINKSLRVLGIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVY 167
Query: 262 KVLFN--------------------------VMTYNIVISGWSKLGQVVEMERVLKEIVA 295
L N V+TYN +I+G K + E ++KE++
Sbjct: 168 NTLINGFVGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLE 227
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+G+ P +T+S L++GL + +++ A+++++ + G PD N +I SVG
Sbjct: 228 KGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQL 287
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+ Y M+ +NC PN+ T+ L+ G K + +AL ++ +L G+ P + L+
Sbjct: 288 ALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLK 347
Query: 416 PLCSYGPPHAAMMMYKKA 433
LCS A++ + A
Sbjct: 348 GLCSCSRISFAILFLQDA 365
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 115/258 (44%), Gaps = 1/258 (0%)
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + ERV KE+ SPD++ ++ ++ G RAGRI D IE+++ M + + ++
Sbjct: 4 GDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGRED-SQNVVSF 62
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N ++ GD D+ + ++ M+ + TY L+ G K+ + +L V +
Sbjct: 63 NIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGIAEE 122
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G V ++ + LC A+ + K G + Y L+ G K
Sbjct: 123 KGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSKFDD 182
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ ++ EM + Y +I GLC + A +++E L KG+ P + YS L
Sbjct: 183 AIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMK 242
Query: 521 KLLASNKLESAYNLFRKI 538
L +K+E A L+ ++
Sbjct: 243 GLCQGHKVEMALQLWNQV 260
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 103/225 (45%), Gaps = 1/225 (0%)
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+G ID A V+ M E PD YNA+++ + G +C++ ++ M + + N+
Sbjct: 2 ESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGREDSQ-NVV 60
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
++ ++ GL + V A+ ++E M G V + T ++ C G + ++ + A
Sbjct: 61 SFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGIA 120
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
+ G L AY ++ L K + + + M ++G + +Y +I G + +
Sbjct: 121 EEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSKF 180
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++A+ V E P+ + Y+ L N L + AY+L +++
Sbjct: 181 DDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEM 225
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 184/414 (44%), Gaps = 22/414 (5%)
Query: 108 QKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIK-HPNVAKDVKSY 166
Q+L K V+ N+DL+L + F+ A K H N A + ++Y
Sbjct: 97 QRLSPKRVVSMISRQQNLDLALQI------------------FDHAGKFHRNFAHNYETY 138
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
+++ L + + F+ M ++S + K + V+ ++ AG+ AI+ R+
Sbjct: 139 LAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPS 198
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK--VLFNVMTYNIVISGWSKLGQVV 284
FGL+ S N +L L Q +F + + K ++ NV T NI++ K +
Sbjct: 199 FGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDID 258
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
RVL+E+ A GF P+ +T++ ++ G G + A VF + ++G PD Y ++
Sbjct: 259 AAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILM 318
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
Y G F + +K M EPN TY +I K +K + L + ++ML++ +
Sbjct: 319 DGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYI 378
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
PS+ ++ LC G A ++KK K C L+ L GK L
Sbjct: 379 PSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKL 438
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+ E ++ PS Y +IAG+C G+L A + + + KG P+ Y+ L
Sbjct: 439 FDEFEKGSIPST-LTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNML 491
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 132/298 (44%), Gaps = 37/298 (12%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
L F K + +V + N++VKAL ++ D VL +M G P++ T + ++
Sbjct: 226 LMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGG 285
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFN 266
++ G + A ++ G + D G D + +++ C++ A + + M+ +V N
Sbjct: 286 YVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPN 345
Query: 267 VMTYNIVISGWSK---LGQVVEM----------------ERVLKEIVAEG---------- 297
+TY ++I + K G+V+ + RV+ + EG
Sbjct: 346 DVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWK 405
Query: 298 ------FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
+PD+ S LI L + G++ +A ++FD EKG P T YNA+I+ G
Sbjct: 406 KLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEF-EKGSIPSTLTYNALIAGMCEGG 464
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
+ E + + M C PN TY LI G K + + V EEMLD G +P+ T
Sbjct: 465 ELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKAT 522
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 118/276 (42%), Gaps = 6/276 (2%)
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
G+ LF + N +G KL R I + G P +F+ L+ L + R D
Sbjct: 169 GENLFITVIRNYGFAGRPKLAI-----RTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDL 223
Query: 321 AIEVFDTMKEK-GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
+F ++K G P+ N ++ D D ++ + M + PN+ TYT ++
Sbjct: 224 VHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTIL 283
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
G + + A VF E+LDRG VP T T ++ C G A+ + + + +
Sbjct: 284 GGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVE 343
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+ Y +++ K G +L+L +M E Y + VI LC G++E A +
Sbjct: 344 PNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACEL 403
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
++ L+K P + S L + L K+ A LF
Sbjct: 404 WKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLF 439
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 86/176 (48%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y VI++A + K + N+L DM ++ P V+D G+V A ++ +L
Sbjct: 348 TYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKL 407
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVV 284
D + ++ LC+ V A LF+ + + + +TYN +I+G + G++
Sbjct: 408 LKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELP 467
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
E R+ +V +G P++ T++ LI+G + G + I V + M + GC P+ Y
Sbjct: 468 EAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATY 523
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 153/355 (43%), Gaps = 33/355 (9%)
Query: 24 FSFSTSVRS-NLSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNS 82
F SVRS N N L+ N++ ++ H + K F I PNV+ + +
Sbjct: 199 FGLQPSVRSFNTLLNTLVQNKRFDLV----HLMFKNCRKKFGI-----VPNVF--TCNIL 247
Query: 83 VKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLS 142
VK + +D + L+++ G I NV ++G V++G++
Sbjct: 248 VKALCKKNDIDAAIR--------VLEEMPAMGFIP------NVVTYTTILGGYVSKGDMV 293
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
G V I D +Y +++ ++ F V+ +M + V P+ T
Sbjct: 294 GARRVF---GEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYG 350
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--K 260
++++++ + + + + +L + + + V+ LC+ V A L+ + K
Sbjct: 351 VIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKK 410
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
N +T + +I K G+V E ++ E +G P +LT++ LI G+ G + +
Sbjct: 411 NCTPDNAIT-STLIHWLCKEGKVWEARKLFDEF-EKGSIPSTLTYNALIAGMCEGGELPE 468
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
A ++D M EKGC P+ YN +I + VG+ E ++ + M C PN TY
Sbjct: 469 AARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATY 523
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 115/277 (41%), Gaps = 7/277 (2%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N TY +I SK ME ++ ++ F +I G AGR AI F
Sbjct: 134 NYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTF 193
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM-SSYNCEPNMDTYTRLISGLLK 384
+ G P ++N +++ + FD +K + PN+ T L+ L K
Sbjct: 194 LRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCK 253
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+ A+ V EEM G +P+ T T+ L S G A ++ + G T
Sbjct: 254 KNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTT 313
Query: 445 YKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
Y +L + G+ K G +D + EM+E+ + Y +I C + + +++
Sbjct: 314 YTIL---MDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLD 370
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ L K + PS + ++ + L K+E A L++K+
Sbjct: 371 DMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKL 407
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 187/424 (44%), Gaps = 35/424 (8%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K ++ D+ YNV + + G+ D ++ G+ PD T + ++ +A +
Sbjct: 229 MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANR 288
Query: 214 VYKAIQMLGRLED----------------FGL--KFD-AESL----------------NV 238
+ +A++M LE +G KFD A SL N
Sbjct: 289 LDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNC 348
Query: 239 VLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
+L CL + V A +F MK N+ TYNI+I + G++ + + G
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
P+ T + +++ L ++ ++D+A +F+ M K C PD + ++I VG D+ K
Sbjct: 409 FPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYK 468
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
Y+ M +C N YT LI + D +++++M+++ P + ++++ +
Sbjct: 469 VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMF 528
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
G P M+++ + +Y +L+ L G +L++ M+E G D
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y VI G C G++ A ++EE KGF P+ + Y + + L ++L+ AY LF +
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 539 KIAR 542
K R
Sbjct: 649 KSKR 652
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 185/378 (48%), Gaps = 8/378 (2%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ G FD ++L +G P + + ++ + G+V +A+++ +
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
+ + + N+++ LC+ + A L +SM+ LF NV T NI++ K ++
Sbjct: 370 KKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E + +E+ + +PD +TF LI+GLG+ GR+DDA +V++ M + C ++ Y ++
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I N+ + G ++ K YK M + NC P++ + + K+ + +FEE+ R
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML-- 461
VP + + + L G + ++ ++ GC L AY ++ + GF KCG +
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV---IDGFCKCGKVNK 605
Query: 462 -LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L EM+ G+ Y VI GL I +L+ A ++ EE+ K + ++YS L +
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 521 KLLASNKLESAYNLFRKI 538
+++ AY + ++
Sbjct: 666 GFGKVGRIDEAYLILEEL 683
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 174/368 (47%), Gaps = 1/368 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ DM + +PDL+ L+ MD +AG+ K M ++ DA S ++++ L
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ LF SMK + + + YNIVI G+ K G+V + ++L+E+ +GF P +
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T+ +I+GL + R+D+A +F+ K K + Y+++I + VG DE + +
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
PN+ T+ L+ L+K+ ++ +AL F+ M + P+ T + LC
Sbjct: 684 MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
+ A + +++ +K G K S +Y ++ L+ G L+ + +G D Y +
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
I GL N + +A + EE+ R+G L + L ++ LE A + ++ +
Sbjct: 804 IEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGK 863
Query: 544 NDYARRLW 551
+A R W
Sbjct: 864 ARHAARSW 871
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/483 (21%), Positives = 193/483 (39%), Gaps = 107/483 (22%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +YN I+ L + D V +M K+ P+L T +I++D RAG++ A ++
Sbjct: 343 VIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRD 401
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLG 281
++ GL + ++N+++ LC+ + A ++F M KV + +T+ +I G K+G
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVG 461
Query: 282 QVVEM-----------------------------------ERVLKEIVAEG--------- 297
+V + ++ K+++ +
Sbjct: 462 RVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN 521
Query: 298 --------------------------FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
F PD+ ++S LI GL +AG ++ E+F +MKE+
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
GC DT AYN VI + G ++ + + M + EP + TY +I GL K ++ +A
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641
Query: 392 LEVF-----------------------------------EEMLDRGIVPSTGTITSFLEP 416
+F EE++ +G+ P+ T S L+
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
L + A++ ++ +++ C + Y +L+ L K W EMQ+ G
Sbjct: 702 LVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPS 761
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
Y +I+GL G + A + + G P Y+ + L N+ A++LF
Sbjct: 762 TISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821
Query: 537 KIK 539
+ +
Sbjct: 822 ETR 824
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 170/395 (43%), Gaps = 41/395 (10%)
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
+ +F W + + +SYN ++ + R + FD + +L +M+ G P + T ++
Sbjct: 82 IEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVL 141
Query: 207 SFIRAGQV---YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++A ++ Y +QM+ + + F F A
Sbjct: 142 GCVKANKLREGYDVVQMMRKFK-FRPAFSA------------------------------ 170
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
Y +I +S + M + +++ G+ P F+ LI G + GR+D A+
Sbjct: 171 ------YTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALS 224
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+ D MK D YN I ++ VG D K++ + + +P+ TYT +I L
Sbjct: 225 LLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLC 284
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
K+ ++ +A+E+FE + VP T + + S G A + ++ R G S+
Sbjct: 285 KANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVI 344
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
AY +L L GK L ++ EM++ P + Y +I LC G+L+ A + +
Sbjct: 345 AYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSM 403
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ G P+ + + ++L S KL+ A +F ++
Sbjct: 404 QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM 438
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 109/250 (43%), Gaps = 4/250 (1%)
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT-NAYNAVISNYISVGDF 353
A F P F+I L R ++ AIE F + + P +YN+++ +F
Sbjct: 58 ALSFKPQP---EFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNF 114
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
D + MS P+++T ++ G +K+ K+ + +V + M P+ T+
Sbjct: 115 DALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTL 174
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
+ + + ++++ +++G + ++ + L+R + G+ L L EM+ S
Sbjct: 175 IGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSL 234
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
+D +Y I +G+++ A E G P + Y+ + L +N+L+ A
Sbjct: 235 DADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVE 294
Query: 534 LFRKIKIARQ 543
+F ++ R+
Sbjct: 295 MFEHLEKNRR 304
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 187/424 (44%), Gaps = 35/424 (8%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K ++ D+ YNV + + G+ D ++ G+ PD T + ++ +A +
Sbjct: 229 MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANR 288
Query: 214 VYKAIQMLGRLED----------------FGL--KFD-AESL----------------NV 238
+ +A++M LE +G KFD A SL N
Sbjct: 289 LDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNC 348
Query: 239 VLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
+L CL + V A +F MK N+ TYNI+I + G++ + + G
Sbjct: 349 ILTCLRKMGKVDEALRVFEEMKKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGL 408
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
P+ T + +++ L ++ ++D+A +F+ M K C PD + ++I VG D+ K
Sbjct: 409 FPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYK 468
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
Y+ M +C N YT LI + D +++++M+++ P + ++++ +
Sbjct: 469 IYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMF 528
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
G P M+++ + +Y +L+ L G +L++ M+E G D
Sbjct: 529 KAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y VI G C G++ A ++EE KGF P+ + Y + + L ++L+ AY LF +
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 539 KIAR 542
K R
Sbjct: 649 KSKR 652
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 185/378 (48%), Gaps = 8/378 (2%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ G FD ++L +G P + + ++ + G+V +A+++ +
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM 369
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
+ + + N+++ LC+ + A L +SM+ LF NV T NI++ K ++
Sbjct: 370 KKDAAP-NLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E + +++ + +PD +TF LI+GLG+ GR+DDA ++++ M + C ++ Y ++
Sbjct: 429 DEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSL 488
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I N+ + G ++ K YK M + NC P++ + + K+ + +FEE+ R
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRF 548
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML-- 461
VP + + + L G + ++ ++ GC L AY ++ + GF KCG +
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV---IDGFCKCGKVNK 605
Query: 462 -LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L EM+ G+ Y VI GL I +L+ A ++ EE+ K + ++YS L +
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 521 KLLASNKLESAYNLFRKI 538
+++ AY + ++
Sbjct: 666 GFGKVGRIDEAYLILEEL 683
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 174/368 (47%), Gaps = 1/368 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ DM + +PDL+ L+ MD +AG+ K M ++ DA S ++++ L
Sbjct: 504 IYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLI 563
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ LF SMK + + + YNIVI G+ K G+V + ++L+E+ +GF P +
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T+ +I+GL + R+D+A +F+ K K + Y+++I + VG DE + +
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
PN+ T+ L+ L+K+ ++ +AL F+ M + P+ T + LC
Sbjct: 684 MQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
+ A + +++ +K G K S +Y ++ L+ G L+ + +G D Y +
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
I GL N + +A + EE+ R+G L + L ++ LE A + ++ +
Sbjct: 804 IEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGK 863
Query: 544 NDYARRLW 551
+A R W
Sbjct: 864 ARHAARSW 871
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/483 (21%), Positives = 193/483 (39%), Gaps = 107/483 (22%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +YN I+ L + D V +M K+ P+L T +I++D RAG++ A ++
Sbjct: 343 VIAYNCILTCLRKMGKVDEALRVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDCAFELRD 401
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLG 281
++ GL + ++N+++ LC+ + A ++F M KV + +T+ +I G K+G
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVG 461
Query: 282 QVVEM-----------------------------------ERVLKEIVAEG--------- 297
+V + ++ K++V +
Sbjct: 462 RVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLN 521
Query: 298 --------------------------FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
F PD+ ++S LI GL +AG ++ E+F +MKE+
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
GC DT AYN VI + G ++ + + M + EP + TY +I GL K ++ +A
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641
Query: 392 LEVF-----------------------------------EEMLDRGIVPSTGTITSFLEP 416
+F EE++ +G+ P+ T S L+
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDA 701
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
L + A++ ++ +++ C + Y +L+ L K W EMQ+ G
Sbjct: 702 LVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPS 761
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
Y +I+GL G + A + + G P Y+ + L N+ A++LF
Sbjct: 762 TISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821
Query: 537 KIK 539
+ +
Sbjct: 822 ETR 824
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 182/422 (43%), Gaps = 36/422 (8%)
Query: 117 EDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRR 176
E+AL +N + V V+ R A + +F W + + +SYN ++ + R
Sbjct: 53 ENALSALNFKPQPEFVIGVLRRLKDVNRA-IEYFRWYERRTELPHCPESYNSLLLVMARC 111
Query: 177 KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESL 236
+ FD + +L +M+ G P + T ++ S ++A ++ + ++ + F +
Sbjct: 112 RNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFR------ 165
Query: 237 NVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAE 296
F++ Y +I +S + M + +++
Sbjct: 166 -----------------PAFSA-----------YTTLIGAFSAVNHSDMMLTLFQQMQEL 197
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
G+ P F+ LI G + GR+D A+ + D MK D YN I ++ VG D
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
K++ + + +P+ TYT +I L K+ ++ +A+E+FE + VP T + +
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
S G A + ++ R G S+ AY +L L GK L ++ EM++ P +
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAP-N 376
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
Y +I LC G+L+ A + + + G P+ + + ++L S KL+ A +F
Sbjct: 377 LSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFE 436
Query: 537 KI 538
++
Sbjct: 437 QM 438
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 108/250 (43%), Gaps = 4/250 (1%)
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT-NAYNAVISNYISVGDF 353
A F P F+I L R ++ AIE F + + P +YN+++ +F
Sbjct: 58 ALNFKPQP---EFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNF 114
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
D + MS P+++T ++ +K+ K+ + +V + M P+ T+
Sbjct: 115 DALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTL 174
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
+ + + ++++ +++G + ++ + L+R + G+ L L EM+ S
Sbjct: 175 IGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSL 234
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
+D +Y I +G+++ A E G P + Y+ + L +N+L+ A
Sbjct: 235 DADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVE 294
Query: 534 LFRKIKIARQ 543
+F ++ R+
Sbjct: 295 MFEHLEKNRR 304
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 196/414 (47%), Gaps = 25/414 (6%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ LF H +V ++ ++ L R +L M ++G+ P+ T
Sbjct: 68 EALDLF------HQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT 121
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFG-LKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK 262
++D + G A+ +L ++E+ +K D + ++ L + A +LF M+ K
Sbjct: 122 IVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDK 181
Query: 263 VLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
+F +++TY+ +I+G+ G+ E +R+L+E++ SPD +TFS LI L + G ++ A
Sbjct: 182 GIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSA 241
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS----------SYN-CEP 370
++ M G P+ N ++ G + ++ +K M ++N EP
Sbjct: 242 QDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEP 301
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
++ TY LISGL+ K +A E++EEM RGIVP T T +S + LC A M+
Sbjct: 302 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMF 361
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGL 487
++ + L ++G+ K GM+ L+L+ EM G ++ Y +I G
Sbjct: 362 DSMGSKSFSPNIVTFNTL---ITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGF 418
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
+G + ++ + +E + G P + + L + +L+ A + +++++
Sbjct: 419 RKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQMS 472
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 182/396 (45%), Gaps = 18/396 (4%)
Query: 154 IKHP-NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
IKH + D+ S+N+++K F + + K G +P L T + ++
Sbjct: 5 IKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED 64
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYN 271
+V +A+ + ++ K + + ++ LC+ V A +L + M + + N +TY
Sbjct: 65 RVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120
Query: 272 IVISGWSKLGQVVEMERVLKEIVA-EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
++ G K+G V +L+++ PD + +S +I+GL + GR DA +F M++
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQD 180
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
KG PD Y+ +I+ + S G + E + + M P++ T++ LI+ L+K +
Sbjct: 181 KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV-----------GCK 439
A ++ +EM+ G+ P+ T + L+ LC G A+ M+K +K G +
Sbjct: 241 AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVE 300
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+ Y +L+ L GK +L+ EM G D Y +I GLC +L+ A +
Sbjct: 301 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQM 360
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ K F P+ + ++ L + ++ LF
Sbjct: 361 FDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELF 396
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 5/208 (2%)
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D ++N +I + S + + ++ P + T+ L+ GL +V++AL++F
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
+M P+ T T+ + LC G A+ + + + G + + Y ++ +
Sbjct: 74 HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 456 GKCGMLLDLWHEMQE-SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G L+L +M+E S D IY +I GL G+ +A + E KG P +
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189
Query: 515 YSKLSNKLLASNKLESAYNLFRKIKIAR 542
YS + N +S K A L +++ + +
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRK 217
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 184/384 (47%), Gaps = 8/384 (2%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
A+D +Y ++V A R + + + +G + ++ FIR G++ +A
Sbjct: 227 CARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEAT 286
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN-SMKGKVLFNVMTYNIVISGW 277
Q+ D + N+++ LC+ + A +LF + +G V+ +V TY+ ++ +
Sbjct: 287 QLFESTMTKESVPDVFTYNLLIA-LCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAF 345
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G+ + V + G PD++ ++ LI LG+ G++D+A+E+ + M KG PD
Sbjct: 346 GKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDC 405
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN VI S G +++ ++ M P++ TY L++GL K R+ +A ++F+E
Sbjct: 406 RTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDE 465
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M +P T + ++ L G A+ + K+G + Y L +SGF +
Sbjct: 466 MQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNAL---ISGFCR 522
Query: 458 CGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G + +L+ +M E D Y ++ G G A+ +++E +R+G P+
Sbjct: 523 SGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALAT 582
Query: 515 YSKLSNKLLASNKLESAYNLFRKI 538
Y+ L L + ++E AY LF+++
Sbjct: 583 YNVLIRSLSMAGQVEDAYTLFKEM 606
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 175/402 (43%), Gaps = 41/402 (10%)
Query: 119 ALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKF 178
AL VN + ++ + G L+ EA LF + K DV +YN+++ AL + K
Sbjct: 263 ALSAVNYNF---IIQGFIRCGRLA-EATQLFESTMTKES--VPDVFTYNLLI-ALCKSKQ 315
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNV 238
+ + + + GV D+ T S +MD+F +AG+ KA+++
Sbjct: 316 LEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVF----------------- 358
Query: 239 VLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
+N K + + + YN++IS K G+V E +L+++ +G
Sbjct: 359 -----------------YNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGI 401
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
PD T++ +I+ L GR + A F MK + PD YN +++ + DE
Sbjct: 402 MPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACD 461
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
+ M + C P++ T+ LI L K+ ++ DALE ++ G P++ + + C
Sbjct: 462 LFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFC 521
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
G +++ + C Y +L+ S G M ++L EM G+
Sbjct: 522 RSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALA 581
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
Y +I L GQ+E+A + +E + KGF P YS L N
Sbjct: 582 TYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPN 623
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 157/346 (45%), Gaps = 3/346 (0%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG-LKFDAESLNVVLWCLCQRLHVGAASS 254
PD+ + ++ + +AG +A+ M RL+ G K +A S + ++ LC+ A +
Sbjct: 123 PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALA 182
Query: 255 LFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
+F M G L +V N +I +LG + + R+L + A + D+ T+ L+
Sbjct: 183 VFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHC 242
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
RAG++ + + + GC YN +I +I G E + ++ + P++
Sbjct: 243 RAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVF 302
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
TY LI+ L KS+++ +AL +F+E G+V T + ++ G A+ ++
Sbjct: 303 TYNLLIA-LCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNM 361
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
+K GC Y +L+ L GK L+L +M G D Y VI L + G+
Sbjct: 362 QKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRY 421
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
E A R+ P + Y+ L N L + + A +LF +++
Sbjct: 422 EKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQ 467
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 176/393 (44%), Gaps = 48/393 (12%)
Query: 190 AKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG--RLEDFGLKFDAESLNVVLWCLCQRL 247
++GV T + + +F RAG + A+ ML R +F + D + + LC+
Sbjct: 45 RQKGVGLSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNF-CQPDTVAFTAAMHWLCEVR 103
Query: 248 HVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLG---QVVEMERVLKEIVAEG-FSPD 301
V A +LF+ M+ +V+ YN +I+G+ K G + ++M R LK+ EG P+
Sbjct: 104 RVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQ---EGSCKPN 160
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+++F L+ L + R DA+ VF M G D N N +I +G + +
Sbjct: 161 AVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLH 220
Query: 362 GMSSYNCEPNMDTYTRL-----------------------------------ISGLLKSR 386
M+++ C + TY L I G ++
Sbjct: 221 HMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCG 280
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
++A+A ++FE + + VP T + L LC A+ ++++A + G L + Y
Sbjct: 281 RLAEATQLFESTMTKESVPDVFTY-NLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYS 339
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+ G+ L++++ MQ++G D +Y +I+ L G+++ A+ ++E+ RK
Sbjct: 340 YLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRK 399
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G P Y+ + + L + + E AY+ F +K
Sbjct: 400 GIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMK 432
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 116/240 (48%), Gaps = 12/240 (5%)
Query: 106 FLQKLKGKGVIEDA-LWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
L+ + KG++ D +N+ +D+ L G+ E FF +K + DV
Sbjct: 392 LLEDMNRKGIMPDCRTYNIVIDV-LSSCGRY--------EKAYSFFGM-MKRRKHSPDVV 441
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ L + + D C++ +M PDL T ++D+ +AG++ A++ RL
Sbjct: 442 TYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARL 501
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
G ++ N ++ C+ V LF M F + +TY I++ G+S+ G
Sbjct: 502 VKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHT 561
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+L+E+V EG +P T++ LI L AG+++DA +F M KG PD Y+A+
Sbjct: 562 SMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 147/358 (41%), Gaps = 50/358 (13%)
Query: 228 GLKFDAESLNVVLWCLCQ--RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE 285
GL DA + ++ +C+ R + A KG L V T I + + G +
Sbjct: 13 GLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEV-TCTECIQAFGRAGDLDA 71
Query: 286 MERVLKEIVAEGF-SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK-GCGPDTNAYNAV 343
+L ++ F PD++ F+ + L R++ A+ +FD M+E C PD AYN +
Sbjct: 72 AMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTL 131
Query: 344 ISNYISVGDFDECMKYYKGMSSY-NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
I+ Y GD D + ++ + +C+PN ++ L+ L K + DAL VF+EML G
Sbjct: 132 IAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAG 191
Query: 403 IVPSTGTITSFLEPLCSYG------------PPHA-----------------AMMMYKKA 433
+ + + C G HA A M++ A
Sbjct: 192 LKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVA 251
Query: 434 ------RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH----EMQESGYPSDGEIYEYV 483
R GC LS Y +++ GF +CG L + M + P D Y +
Sbjct: 252 SFMELARHDGCALSAVNYNFIIQ---GFIRCGRLAEATQLFESTMTKESVP-DVFTYNLL 307
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
IA LC QLE A+ + +E+ + G YS L + + + A +F ++ A
Sbjct: 308 IA-LCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKA 364
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 122/317 (38%), Gaps = 39/317 (12%)
Query: 259 MKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG-- 316
+K + + T ++ KLG+ + +L E+ +G +T + I+ GRAG
Sbjct: 10 LKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGDL 69
Query: 317 ----------------------------------RIDDAIEVFDTMKEK-GCGPDTNAYN 341
R++ A+ +FD M+E C PD AYN
Sbjct: 70 DAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYN 129
Query: 342 AVISNYISVGDFDECMKYYKGMSSY-NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+I+ Y GD D + ++ + +C+PN ++ L+ L K + DAL VF+EML
Sbjct: 130 TLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLG 189
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ + + C G A + C Y +L+ G+
Sbjct: 190 AGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHE 249
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ + G Y ++I G G+L A + E ++ K P Y+ L
Sbjct: 250 VASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI- 308
Query: 521 KLLASNKLESAYNLFRK 537
L S +LE A LF++
Sbjct: 309 ALCKSKQLEEALTLFQE 325
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 108/260 (41%), Gaps = 6/260 (2%)
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
K ++ G D+ T + +++ + + GR + E+ +++KG G I +
Sbjct: 7 KHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRA 66
Query: 351 GDFDECMKYYKGMSSYN-CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR-GIVPSTG 408
GD D M M N C+P+ +T + L + R+V A+ +F++M + P
Sbjct: 67 GDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVV 126
Query: 409 TITSFLEPLCSYGPPHAAMMMYKKARKVG-CKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
+ + C G A+ M+++ ++ G CK + ++ L+ L + L ++ E
Sbjct: 127 AYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQE 186
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
M +G +D + +I C +G L A ++ Y L N + +
Sbjct: 187 MLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQ 246
Query: 528 LESAYNLFRKIKIARQNDYA 547
+ + +++AR + A
Sbjct: 247 MHEVASF---MELARHDGCA 263
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 181/403 (44%), Gaps = 8/403 (1%)
Query: 143 GEAMVLFFNWAIK--HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
G+A+ LF + PNV +Y ++ L + + +L M + PD+
Sbjct: 154 GDALHLFDKMIGEGFQPNVV----TYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVV 209
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM- 259
+ ++DS + QV +A + ++ G+ D + ++ LC ++L N M
Sbjct: 210 YTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI 269
Query: 260 KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
K++ +V+ ++ V+ K G++ E V+ ++ G P+ +T++ L++G +D
Sbjct: 270 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMD 329
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
+A++VFDTM G P+ +YN +I+ Y + D+ ++ M PN TY L+
Sbjct: 330 EAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM 389
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
GL ++ DA+ +F EM+ G +P T L+ LC AM + K
Sbjct: 390 HGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMD 449
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+ Y +++ + G+ D++ + G + Y +I GLC G L+ A +
Sbjct: 450 PDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKL 509
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
E G P Y+ ++ LL + + A L +++ +AR
Sbjct: 510 FMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEM-LAR 551
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 181/385 (47%), Gaps = 1/385 (0%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H + +N ++ ++ + K + + ++ + M G+ PD+ TL+I+++SF +
Sbjct: 60 HMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPG 119
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVI 274
A +L ++ GL+ D + ++ LC +G A LF+ M G+ NV+TY +I
Sbjct: 120 FAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLI 179
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G K+G R+L+ + PD + ++ +I+ L + ++ +A +F M +G
Sbjct: 180 NGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGIS 239
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD Y ++I + ++ ++ M + P++ ++ ++ L K K+ +A +V
Sbjct: 240 PDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDV 299
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ M+ RG+ P+ T + ++ C A+ ++ G ++ +Y L+
Sbjct: 300 VDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCK 359
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+ L+ EM + + Y ++ GLC++G+L++A+ + E + G P
Sbjct: 360 IQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLAT 419
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
Y L + L + L+ A L + I+
Sbjct: 420 YRILLDYLCKKSHLDEAMALLKTIE 444
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 199/444 (44%), Gaps = 9/444 (2%)
Query: 96 LLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNL-SGEAMVLFFNWAI 154
L P+ ++ L +G I DAL + + VV G L +G V N AI
Sbjct: 133 LQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAI 192
Query: 155 K------HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
+ N DV Y I+ +L + + N+ S M +G++PD+ T + ++ S
Sbjct: 193 RLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSL 252
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNV 267
+ +L ++ + + D + V+ LC+ + A + + M + V NV
Sbjct: 253 CNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNV 312
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TYN ++ G ++ E +V +V G++P+ ++++ LI G + R+D A +F+
Sbjct: 313 VTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEE 372
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M +K P+T YN ++ VG + + + M ++ P++ TY L+ L K
Sbjct: 373 MCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSH 432
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A+ + + + + P T ++ +C G AA ++ G + ++ Y +
Sbjct: 433 LDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTI 492
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
++ L G L+ EM +G DG Y + GL + A+ +++E L +G
Sbjct: 493 MINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARG 552
Query: 508 FCPSRLVYSKLSNKLLASNKLESA 531
F + + + L ++L +KL+ +
Sbjct: 553 F-SADVSTTTLLVEMLCDDKLDQS 575
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 146/338 (43%), Gaps = 43/338 (12%)
Query: 89 SRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNL-SGEAMV 147
++ ++ ++P+ + + L +G I +A V++ + V VV L G +
Sbjct: 266 NQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQ 325
Query: 148 LFFNWAIK------HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
+ A+K H A +V SYN ++ + + D + +M ++ + P+ T
Sbjct: 326 SEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTY 385
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+ +M G++ AI + + G D + ++L LC++ H+ A +L +++G
Sbjct: 386 NTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEG 445
Query: 262 KVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
+ ++ Y IVI G + G++ + + ++G P+ T++ +I GL R G +D+
Sbjct: 446 SNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDE 505
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A ++F M GC PD YN +
Sbjct: 506 ANKLFMEMDGNGCSPDGCTYNTI-----------------------------------TQ 530
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
GLL++++ A+++ +EML RG T T +E LC
Sbjct: 531 GLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 568
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 2/201 (0%)
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
++N S ++ D+ + + M + P+ + RL++ + K+++ + +M
Sbjct: 34 SHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQM 93
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
GI P T+ + C P A + K K+G + + L+R L GK
Sbjct: 94 DSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKI 153
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRLVYSK 517
G L L+ +M G+ + Y +I GLC +G NA + + S+ +G C P +VY+
Sbjct: 154 GDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGN-TNAAIRLLRSMEQGNCQPDVVVYTS 212
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ + L ++ A+NLF K+
Sbjct: 213 IIDSLCKDRQVTEAFNLFSKM 233
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 101/252 (40%), Gaps = 35/252 (13%)
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN---------- 367
+DDA+ F+ M P T +N ++++ + M S+
Sbjct: 48 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107
Query: 368 -----C--------------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
C +P+ T+T LI GL K+ DAL +F++M+ G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P+ T + + LC G +AA+ + + + C+ + Y ++ L +
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+L+ +M G D Y +I LCN+ + ++ ++ + + P +++S + + L
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287
Query: 523 LASNKLESAYNL 534
K+ A+++
Sbjct: 288 CKEGKITEAHDV 299
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 196/414 (47%), Gaps = 25/414 (6%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ LF H +V ++ ++ L R +L M ++G+ P+ T
Sbjct: 68 EALDLF------HQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT 121
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFG-LKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK 262
++D + G A+ +L ++E+ +K D + ++ L + A +LF M+ K
Sbjct: 122 IVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDK 181
Query: 263 VLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
+F +++TY+ +I+G+ G+ E +R+L+E++ SPD +TFS LI L + G ++ A
Sbjct: 182 GIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSA 241
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS----------SYN-CEP 370
++ M G P+ N ++ G + ++ +K M ++N EP
Sbjct: 242 QDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEP 301
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
++ TY LISGL+ K +A E++EEM RGIVP T T +S + LC A M+
Sbjct: 302 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMF 361
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGL 487
++ + L ++G+ K GM+ L+L+ EM G ++ Y +I G
Sbjct: 362 DSMGSKSFSPNIVTFNTL---ITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGF 418
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
+G + ++ + +E + G P + + L + +L+ A + +++++
Sbjct: 419 RKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQMS 472
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 182/396 (45%), Gaps = 18/396 (4%)
Query: 154 IKHP-NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
IKH + D+ S+N+++K F + + K G +P L T + ++
Sbjct: 5 IKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED 64
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYN 271
+V +A+ + ++ K + + ++ LC+ V A +L + M + + N +TY
Sbjct: 65 RVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120
Query: 272 IVISGWSKLGQVVEMERVLKEIVA-EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
++ G K+G V +L+++ PD + +S +I+GL + GR DA +F M++
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQD 180
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
KG PD Y+ +I+ + S G + E + + M P++ T++ LI+ L+K +
Sbjct: 181 KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV-----------GCK 439
A ++ +EM+ G+ P+ T + L+ LC G A+ M+K +K G +
Sbjct: 241 AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVE 300
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+ Y +L+ L GK +L+ EM G D Y +I GLC +L+ A +
Sbjct: 301 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQM 360
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ K F P+ + ++ L + ++ LF
Sbjct: 361 FDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELF 396
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 5/208 (2%)
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D ++N +I + S + + ++ P + T+ L+ GL +V++AL++F
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
+M P+ T T+ + LC G A+ + + + G + + Y ++ +
Sbjct: 74 HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 456 GKCGMLLDLWHEMQE-SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G L+L +M+E S D IY +I GL G+ +A + E KG P +
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189
Query: 515 YSKLSNKLLASNKLESAYNLFRKIKIAR 542
YS + N +S K A L +++ + +
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRK 217
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 192/417 (46%), Gaps = 36/417 (8%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA- 217
+ D+ + N+++ F +VL+ + K G P TL+ ++ GQV KA
Sbjct: 338 IQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKAL 397
Query: 218 ----------------------------------IQMLGRLEDFGLKFDAESLNVVLWCL 243
I++L +++ K + E + ++ L
Sbjct: 398 HFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDAL 457
Query: 244 CQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C+ V A LF+ M K + +V+TY+ +I G+ +G++ E +L E+V + +PD
Sbjct: 458 CKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDV 517
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
T++ L++ LG+ G++ +A V M + PD YN +++ Y+ V + + +
Sbjct: 518 RTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNA 577
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
MS P++ TYT LI+G KS+ V +AL +F+EM + +VP T T +S ++ LC G
Sbjct: 578 MSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGR 637
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
+ + R G + Y L+ L G + L+++M++ G + +
Sbjct: 638 ISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTI 697
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ GLC G+L++A V ++ L KG+ +Y+ + LE A + K++
Sbjct: 698 LLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKME 754
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 164/348 (47%), Gaps = 2/348 (0%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P++E S ++D+ + V +A + + G+ D + + +++ C + A L
Sbjct: 445 PNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGL 504
Query: 256 FNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
N M K + +V TY I++ K G+V E + VL ++ PD T++ L+ G
Sbjct: 505 LNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLL 564
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
+ A VF+ M G PD + Y +I+ + DE + +K M N P+ T
Sbjct: 565 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVT 624
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y+ L+ GL KS +++ ++ +EM DRG T S ++ LC G A+ ++ K +
Sbjct: 625 YSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMK 684
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G + + + +LL L G+ +++ ++ GY D IY +I G C G LE
Sbjct: 685 DQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLE 744
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
A+ ++ + G P+ + + + N L ++ + A L R++ IAR
Sbjct: 745 EALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQM-IAR 791
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 191/428 (44%), Gaps = 35/428 (8%)
Query: 119 ALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKF 178
++ NV+ +SL V+ K++ RG +P D + N ++K L +
Sbjct: 38 SIQNVDDAVSLSVLTKILKRG----------------YP---PDTVTLNTLIKGLCLKGQ 78
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNV 238
+ + +G + + + +++ R G AI+ L +++ K + E N
Sbjct: 79 VKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNT 138
Query: 239 VLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
++ LC+ V A LF+ M K + NV+TY+ +I G+ +G++ E +L +V +
Sbjct: 139 IIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKT 198
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
+P+ T++ L++ L + G++ +A V M + + Y+ ++ Y V + +
Sbjct: 199 INPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQ 258
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+ MS P++ +Y +I+G K ++V AL +F+EM+ P I F + L
Sbjct: 259 HVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP----IIQFNKIL 314
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYK-------LLLRRLSGFGKCGMLLDLWHEMQE 470
S+ A M Y A + +L L + +L+ G+ + ++ +
Sbjct: 315 DSF----AKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILK 370
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
GYP +I GLC GQ++ A+ ++ L +GF +++ Y+ L N +
Sbjct: 371 RGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRG 430
Query: 531 AYNLFRKI 538
A L RKI
Sbjct: 431 AIKLLRKI 438
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 172/388 (44%), Gaps = 2/388 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V+ YN I+ AL + + + S+M +G++ ++ T S ++ F G++ +A+ +L
Sbjct: 132 NVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLL 191
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ + + + N+++ LC+ V A S+ M K V NV+TY+ ++ G+ +
Sbjct: 192 NVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLV 251
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+V + + V + G +PD +++ +I G + R+D A+ +F M P +
Sbjct: 252 YEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQ-F 310
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N ++ ++ + + + + +P++ T LI+ ++ V ++L
Sbjct: 311 NKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILK 370
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
RG PST T+ + ++ LC G A+ + K G +L+ +Y L+ + G
Sbjct: 371 RGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRG 430
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ L ++ + E+Y +I LC + A + E KG + YS L
Sbjct: 431 AIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 490
Query: 521 KLLASNKLESAYNLFRKIKIARQNDYAR 548
KL+ A L ++ + N R
Sbjct: 491 GFCIVGKLKEAIGLLNEMVLKTINPDVR 518
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 176/418 (42%), Gaps = 39/418 (9%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
+PNV +YN++V AL + +VL+ M K V ++ T S +MD + +V
Sbjct: 200 NPNVC----TYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVK 255
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-----KGKVLFN---- 266
KA + + G+ D S N+++ C+ V A +LF M + FN
Sbjct: 256 KAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILD 315
Query: 267 --------------------------VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
+ T NI+I+ + +GQ+ VL +I+ G+ P
Sbjct: 316 SFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPP 375
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
++T + LI+GL G++ A+ D + +G + +Y +I+ +GD +K
Sbjct: 376 STVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLL 435
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
+ + +PN++ Y+ +I L K + V++A +F EM +GI T ++ + C
Sbjct: 436 RKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIV 495
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
G A+ + + + Y +L+ L GK + M ++ D Y
Sbjct: 496 GKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTY 555
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++ G + +++ A V G P Y+ L N S ++ A NLF+++
Sbjct: 556 NTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEM 613
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 143/328 (43%), Gaps = 45/328 (13%)
Query: 113 KGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKA 172
KG+ D + + +VGK+ EA+ L +K N DV++Y ++V A
Sbjct: 476 KGISADVVTYSTLIYGFCIVGKL-------KEAIGLLNEMVLKTIN--PDVRTYTILVDA 526
Query: 173 LGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
LG+ +VL+ M K V PD+ T + +M+ ++ +V KA + + G+ D
Sbjct: 527 LGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPD 586
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--------------------------- 265
+ +++ C+ V A +LF M K +
Sbjct: 587 VHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLID 646
Query: 266 ---------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
+V+TYN +I G K G + + + ++ +G P++ TF+ L++GL + G
Sbjct: 647 EMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGG 706
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
R+ DA EVF + KG D YN +I + G +E + M C PN T+
Sbjct: 707 RLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFD 766
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIV 404
+I+ L K + A ++ +M+ RG++
Sbjct: 767 IIINALFKKDENDKAEKLLRQMIARGLL 794
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 118/254 (46%)
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
VL +I+ G+ PD++T + LI+GL G++ +A+ D + +G + +Y +I+
Sbjct: 50 VLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVC 109
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTG 408
+GD +K+ + + +PN++ Y +I L K + V++A +F EM +GI +
Sbjct: 110 RIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVV 169
Query: 409 TITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM 468
T ++ + C G A+ + ++ Y +L+ L GK + M
Sbjct: 170 TYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVM 229
Query: 469 QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
++ S+ Y ++ G + +++ A V G P Y+ + N ++
Sbjct: 230 LKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRV 289
Query: 529 ESAYNLFRKIKIAR 542
+ A NLF+++ ++R
Sbjct: 290 DKALNLFKEMILSR 303
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 181/382 (47%), Gaps = 4/382 (1%)
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
+V+ L R + + ++S+M K G+ P+ ++ + + +A+ + ++ +
Sbjct: 411 SVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLE 470
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQVV 284
GL + + N ++ LC+ ++ A+ + +M KG L N+ TYNI+I G K ++
Sbjct: 471 KGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNI-TYNIMIQGCCKDSKIE 529
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E ++ +++ +GF PD+ F+ +I G++++A+ + MK +G PD +Y +I
Sbjct: 530 EALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTII 589
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
Y D + +Y + + +PN Y LI G ++ ++ A+ V + M GI
Sbjct: 590 DGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQ 649
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P+ T S + +C G A M++++RK ++ + Y ++++ L GK ++
Sbjct: 650 PTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNY 709
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+ EM+ P + Y ++ C G E A + +E + G P + Y+ L
Sbjct: 710 FEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQ 769
Query: 525 SNKLESAYNLFRKI-KIARQND 545
+ L+ A +I I QND
Sbjct: 770 VDSLDKAIEKAAEISSIMTQND 791
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/385 (20%), Positives = 169/385 (43%), Gaps = 10/385 (2%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
VA + ++ +++ L R F + +L +M G+ P+ + ++D R G +AI
Sbjct: 297 VAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAI 356
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
++ + +K A + N++ LC+ + A + M G + + + +N V++G
Sbjct: 357 RLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGL-FNSVVAG 415
Query: 277 W-SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
+ G++ + R++ E+V G P+ + + L + R +A+ ++ M EKG
Sbjct: 416 LLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCI 475
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+ NA+I + + + M + E + TY +I G K K+ +AL++
Sbjct: 476 NIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLR 535
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
++M+ +G P S + C G A+ + + + G + + +Y + + G+
Sbjct: 536 DDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTI---IDGY 592
Query: 456 GKCGMLL---DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
K + + +E+ G + IY +I G G + A+ V++ G P+
Sbjct: 593 CKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTN 652
Query: 513 LVYSKLSNKLLASNKLESAYNLFRK 537
+ Y L + + + ++ A +F +
Sbjct: 653 VTYCSLMHWMCHAGLVDEAKTMFEQ 677
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/415 (20%), Positives = 157/415 (37%), Gaps = 69/415 (16%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAK-EGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
VK+ N +++AL R C V +M + V P+ + + ++ + + G+V ++L
Sbjct: 193 VKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKIL 252
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLG 281
L GL+ A + YN+++ K G
Sbjct: 253 SDLIHAGLQQSA--------------------------------GAVPYNLLMDALCKSG 280
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+V E R+ + +P +TF LI GL R+ R + + M+ G P+ N
Sbjct: 281 RVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICN 340
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD- 400
+I + G F E ++ + M S + TY + L K ++ A + EEML
Sbjct: 341 ELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLST 400
Query: 401 -----------------------------------RGIVPSTGTITSFLEPLCSYGPPHA 425
RG+ P+ +T+ + LC
Sbjct: 401 GMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQE 460
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ ++ K + G +++ L+ L ++ M G D Y +I
Sbjct: 461 AVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQ 520
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
G C ++E A+ + ++ +RKGF P +++ + + K+E A +L ++KI
Sbjct: 521 GCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKI 575
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 119/302 (39%), Gaps = 46/302 (15%)
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE-KGCGPDTNAYNAVISNYISVGDFDECM 357
SP T + L+E L R G + +VFD M++ K P+ +Y ++I VG D+
Sbjct: 190 SPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGF 249
Query: 358 KYYK-----------GMSSYN------CE--------------------PNMDTYTRLIS 380
K G YN C+ P+M T+ LI+
Sbjct: 250 KILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILIN 309
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
GL +S + + + EM GI P+ ++ C G A+ ++ + K
Sbjct: 310 GLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKS 369
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN-IGQLENAVLV 499
+ Y L+ R L G+ + EM +G ++ V+AGL G+LE+ V +
Sbjct: 370 TAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRL 429
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK-------IKIARQNDYARRLWR 552
+ E +++G P+ + + + +L + + A ++ K I IA N L
Sbjct: 430 ISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCE 489
Query: 553 SK 554
K
Sbjct: 490 GK 491
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 1/159 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN ++ GR VL M G+ P T +M AG V +A M +
Sbjct: 620 YNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSR 679
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
++ +++ LC+ + A + F M+ + + N +TY ++ + K G
Sbjct: 680 KNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNE 739
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
E ++ E+V+ G PD+++++ L+ G + +D AIE
Sbjct: 740 EASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIE 778
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 3/179 (1%)
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD-RGIVPSTGTITSFLEPLCSYG 421
+SS P++ T L+ L ++ + +VF+EM D + + P+ + TS ++ LC G
Sbjct: 184 LSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVG 243
Query: 422 PPHAAMMMYKKARKVGCKLSLTA--YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
+ G + S A Y LL+ L G+ + L M+ES
Sbjct: 244 KVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVT 303
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ +I GL + ++ E G P+ ++ ++L + A LF ++
Sbjct: 304 FGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEM 362
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 183/418 (43%), Gaps = 39/418 (9%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
VA DVK N +++ L +D +C V ++M + G+ P + T + ++DSF++ G+ K
Sbjct: 198 VAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVA 257
Query: 219 QMLGRLEDFG---LKFDAESLNVVLWCLCQ--------------RLHVGAASSLFNSM-- 259
+L +E G L D + NVV+ L + RL A+S +N +
Sbjct: 258 MLLKEMETRGSGCLPNDV-THNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTYNPLIT 316
Query: 260 ----KG---------------KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
KG ++ V+TYN +I G + GQV + E+ A G P
Sbjct: 317 GLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQP 376
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
D +T++ L+ G +AG + +A+ +F ++ G P YN +I Y +GD +E +
Sbjct: 377 DVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLK 436
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
+ M C P++ TYT L+ G + +A A E F+EML +G+ P + + +
Sbjct: 437 EEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTL 496
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
G A + + G Y +L+ L G DL +M +G D Y
Sbjct: 497 GAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITY 556
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+I C G L A ++ + G PS + Y+ + L SAY FRK+
Sbjct: 557 TCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKM 614
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 177/390 (45%), Gaps = 36/390 (9%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ L + F ++ +M EG+ P + T + ++ +++GQV A +
Sbjct: 310 TYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEM 369
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
GL+ D + N +L C+ + A LF ++ L V+TYNI+I G+ +LG +
Sbjct: 370 RAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDL 429
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E R+ +E+V +G PD T++ L++G A + A E FD M KG PD AYN
Sbjct: 430 EEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTR 489
Query: 344 ISNYISVGDFDECMK-----YYKGMSS----YN------C-------------------- 368
I +++G + + +G+SS YN C
Sbjct: 490 IRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGL 549
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
+P+ TYT LI + + +A + F++M+ G+ PS T T F+ C G ++A
Sbjct: 550 QPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYG 609
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++K + G + + Y +L+ L G+ + +HEM E G + Y +I G C
Sbjct: 610 WFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNC 669
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
G E+A+ E + G P L + L
Sbjct: 670 KEGNWEDAMRFYFEMHQNGIHPDYLTHKAL 699
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 139/311 (44%), Gaps = 9/311 (2%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA++LF + ++H +A V +YN+++ R + + +M ++G PD+ T +I
Sbjct: 396 EALLLFGD--LRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTI 453
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN----SM 259
+M A + A + + GL+ D + N + L +GA + F M
Sbjct: 454 LMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIR---AELTLGAIAKAFRLREVMM 510
Query: 260 KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
+ + +TYNI+I G K G + + + + ++V G PD +T++ LI G +
Sbjct: 511 LEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLR 570
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
+A + F M G P Y I Y G+ +++ M EPN TY LI
Sbjct: 571 EARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLI 630
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
L ++ + A F EML+RG+VP+ T T ++ C G AM Y + + G
Sbjct: 631 HALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIH 690
Query: 440 LSLTAYKLLLR 450
+K L +
Sbjct: 691 PDYLTHKALFK 701
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 157/375 (41%), Gaps = 2/375 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++NV++ L R+ + ++ M T + ++ + G V KA + +
Sbjct: 276 THNVVITGLARKGDLEEAAEMVEGMRLSKKASSF-TYNPLITGLLAKGFVKKADDLQLEM 334
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQV 283
E+ G+ + N ++ L Q V AA F M+ L +V+TYN +++G+ K G +
Sbjct: 335 ENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSL 394
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E + ++ G +P LT++ LI+G R G +++A + + M E+GC PD Y +
Sbjct: 395 KEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTIL 454
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ + +++ M S +P+ Y I L +A A + E M+ GI
Sbjct: 455 MKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGI 514
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
T T ++ LC G + A + K G + Y L+ G
Sbjct: 515 SSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARK 574
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ +M G Y I C G L +A + L +G P+ + Y+ L + L
Sbjct: 575 FFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALC 634
Query: 524 ASNKLESAYNLFRKI 538
+ + + AY F ++
Sbjct: 635 RTGRTQLAYRHFHEM 649
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 1/194 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M EG++ D T +I++D + G + A + ++ GL+ D + ++ C+R
Sbjct: 509 MMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGL 568
Query: 249 VGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ A F M L + +TY + I + + G + ++++ EG P+ +T++
Sbjct: 569 LREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNV 628
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI L R GR A F M E+G P+ Y +I G++++ M++Y M
Sbjct: 629 LIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNG 688
Query: 368 CEPNMDTYTRLISG 381
P+ T+ L G
Sbjct: 689 IHPDYLTHKALFKG 702
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 110/269 (40%), Gaps = 42/269 (15%)
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
E+ + G +PD + ++ L A R DD V M + G P YN ++ +++
Sbjct: 189 AFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFL 248
Query: 349 SVGDFDECMKYYKGMSSY--NCEPNMDTYTRLISGLLKSRKVADALEVFE---------- 396
G D+ K M + C PN T+ +I+GL + + +A E+ E
Sbjct: 249 KEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASS 308
Query: 397 ------------------------EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
EM + GI+P+ T + + L G AA + + +
Sbjct: 309 FTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVE 368
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCN 489
R +G + + Y L L+G+ K G L L L+ +++ +G Y +I G C
Sbjct: 369 MRAMGLQPDVITYNSL---LNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCR 425
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+G LE A + EE + +G P Y+ L
Sbjct: 426 LGDLEEARRLKEEMVEQGCLPDVCTYTIL 454
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D +YN+++ L + + ++ M G+ PD T + ++ + G + +A
Sbjct: 514 ISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREAR 573
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+ + GL A + V + C+R ++ +A F M + V N +TYN++I
Sbjct: 574 KFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 633
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G+ R E++ G P+ T++ LI+G + G +DA+ + M + G PD
Sbjct: 634 CRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDY 693
Query: 338 NAYNAVISNYISVGDFDECMKY 359
+ A+ + G + ++Y
Sbjct: 694 LTHKALFKGF-DEGHMNHAIEY 714
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 183/398 (45%), Gaps = 43/398 (10%)
Query: 177 KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESL 236
+ FD MC+ GV PD+ S ++++F G+V AI++ ++E G+ + +
Sbjct: 183 QVFDIMCHC-------GVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTY 235
Query: 237 NVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
N ++ LC+ + A M K +V +++TY ++I+G KL + E +LKE+
Sbjct: 236 NNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSD 295
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY-------- 347
G++P+++ ++ LI+G R G I A+++ D M G P++ N++I Y
Sbjct: 296 RGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEH 355
Query: 348 --------------ISVGD-------------FDECMKYYKGMSSYNCEPNMDTYTRLIS 380
I+ G FD + + M N +PN T L+S
Sbjct: 356 AEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVS 415
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
GL ++ K ++A+E++ +L++G +T T + + LC G A + K+ + G L
Sbjct: 416 GLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVL 475
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+Y L+ GK L EM G D Y ++ GLCN+G++E A +
Sbjct: 476 DSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLW 535
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
E + G P Y + + +N++E LF+++
Sbjct: 536 HECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEM 573
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 171/369 (46%), Gaps = 3/369 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++ ++ L + FD + +M P+ L++++ + G+ +AI++ RL
Sbjct: 374 TFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRL 433
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQ 282
+ G + + N ++ LC+ A+ L M +G VL + ++YN +I K G+
Sbjct: 434 LEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVL-DSISYNTLILACCKEGK 492
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V E ++ +E+V G PD T++ L+ GL G+I++A ++ K+ G PD Y
Sbjct: 493 VEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGI 552
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I Y +E K ++ M + E N Y LI ++ + +A + ++M RG
Sbjct: 553 MIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRG 612
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
I ++ T +S + L + G +A + + RK G ++ Y L+ G+ +
Sbjct: 613 IPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVD 672
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+ EM + + Y +I G C +G ++ A ++ E +KG P + Y+ L+N
Sbjct: 673 SILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGF 732
Query: 523 LASNKLESA 531
K+E A
Sbjct: 733 CKEGKMEEA 741
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 132/307 (42%), Gaps = 14/307 (4%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D SYN ++ A + + + +M + G+ PD+ T ++++ G++ +A +
Sbjct: 476 DSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLW 535
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ G DA + +++ C+ V LF M K+ N + Y +I + +
Sbjct: 536 HECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCEN 595
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + E R+ ++ + G S T+S LI GL G +D A ++ D M+++G P+ Y
Sbjct: 596 GNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCY 655
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
A+I Y +G + + MS N PN TYT +I+G K + A ++ EM
Sbjct: 656 TALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQ 715
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+GIVP T + C G A+ + G L Y
Sbjct: 716 KGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYT-------------T 762
Query: 461 LLDLWHE 467
L+D WH+
Sbjct: 763 LIDGWHK 769
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 166/405 (40%), Gaps = 36/405 (8%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F ++ V + +Y V++ L + + FD +L +M+ G P+ + ++D +
Sbjct: 254 FKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYC 313
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVM 268
R G + A+Q+ + G+ ++ + N ++ C+ + A L M G + N
Sbjct: 314 RIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQG 373
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
T+ VI + + E++ F P+ + L+ GL + G+ +AIE++ +
Sbjct: 374 TFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRL 433
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
EKG +T NA+I G +E K K M + +Y LI K KV
Sbjct: 434 LEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKV 493
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG----------- 437
+ ++ EEM+ RGI P T L LC+ G A ++ + +K G
Sbjct: 494 EEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIM 553
Query: 438 ----CKLS--------------------LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
CK + Y L+R G L +M+ G
Sbjct: 554 IDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGI 613
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
P Y +I GL NIG +++A +++E ++G P+ + Y+ L
Sbjct: 614 PQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTAL 658
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 136/299 (45%), Gaps = 9/299 (3%)
Query: 245 QRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ L G LF+ + K LF ++ T N ++S K +V +V + G +PD
Sbjct: 139 KHLGFGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVY 198
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
FS ++ GR+DDAIE+F M++ G P+ YN +I G DE ++ + M
Sbjct: 199 LFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKM 258
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+P++ TY LI+GL+K + +A + +EM DRG P+ + ++ C G
Sbjct: 259 EKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNI 318
Query: 424 HAAMMMYKKARKVGCKL-SLTAYKLLLRRLSGFGKCGMLLDLWH---EMQESGYPSDGEI 479
A+ + G S+T L + G+ K + H EM G +
Sbjct: 319 STALQIRDDMISNGISPNSVTCNSL----IQGYCKSNQMEHAEHLLEEMLTGGGVINQGT 374
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ VI LC + ++A+L + E L + F P+ + + L + L + K A L+ ++
Sbjct: 375 FTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRL 433
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 104/204 (50%), Gaps = 5/204 (2%)
Query: 191 KEGVNPDLETLSIVMDSFIRA----GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
+E V +E ++V + IRA G + +A ++ + G+ + + + ++ L
Sbjct: 571 QEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNI 630
Query: 247 LHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
V +A+ L + M+ + L NV+ Y +I G+ KLGQ+ +++ +L+E+ P+ +T+
Sbjct: 631 GLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITY 690
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ +I G + G + A ++ + M +KG PD YNA+ + + G +E +K MS+
Sbjct: 691 TIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMST 750
Query: 366 YNCEPNMDTYTRLISGLLKSRKVA 389
+ TYT LI G K V+
Sbjct: 751 GGISLDDITYTTLIDGWHKPLTVS 774
>gi|255661036|gb|ACU25687.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 376
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 171/348 (49%), Gaps = 2/348 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V +MA+ V+PD + ++ F+R G++ + + G + + S N+++ L
Sbjct: 12 VYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKGSQ-NVVSFNIMMRGLF 70
Query: 245 QRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
V A S++ MK + + +TY I+I G+ K G + + VL+ +G D+
Sbjct: 71 DNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAEGKGGVLDAF 130
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
+S +I GL + ++D A+ V + M + GC P+ + YN +I+ ++ FD+ ++ ++ M
Sbjct: 131 AYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREM 190
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
S +C P + TY LI+GL K + ++A ++ +EML++G P T + ++ LC
Sbjct: 191 GSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKV 250
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+ ++ + G K + + +L+ L GK L L+ +M + + +
Sbjct: 251 EMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTL 310
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
+ G G + NA+++ LR G P + Y+ L + N++ A
Sbjct: 311 MEGFYKDGDIRNALVIWARILRSGLQPDIISYNITLKGLCSCNRISFA 358
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 158/354 (44%), Gaps = 2/354 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+ D YN ++ R ++ M ++G + ++ + +I+M G+V KAI
Sbjct: 21 VSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKG-SQNVVSFNIMMRGLFDNGEVDKAI 79
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV-LFNVMTYNIVISGW 277
+ ++ G D+ + +++ C+ ++ + + +GK + + Y+ +I+G
Sbjct: 80 SIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAEGKGGVLDAFAYSAMINGL 139
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K ++ + VL ++ G P++ ++ LI G A + DDAI VF M C P
Sbjct: 140 CKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSMDCSPTI 199
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y+ +I+ F E K M +P + TY+ L+ GL + KV AL+++ +
Sbjct: 200 VTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQ 259
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+L +G P + LCS G A+M+Y C +L + L+ G
Sbjct: 260 VLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGD 319
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L +W + SG D Y + GLC+ ++ A+L + ++L K P+
Sbjct: 320 IRNALVIWARILRSGLQPDIISYNITLKGLCSCNRISFAILFLHDALTKKIFPT 373
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 141/304 (46%), Gaps = 36/304 (11%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
W + +++V S+N++++ L D ++ M K G D T I++D F +
Sbjct: 48 WELMGRKGSQNVVSFNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKN 107
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------------ 259
G + K++ +L E G DA + + ++ LC+ + A S+ N M
Sbjct: 108 GYINKSLHVLEIAEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVY 167
Query: 260 -------KGKVLFN-----------------VMTYNIVISGWSKLGQVVEMERVLKEIVA 295
G F+ ++TY+ +I+G K + E ++KE++
Sbjct: 168 NTLINGFVGASKFDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLE 227
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+G+ P +T+S L++GL + +++ A+++++ + KG PD +N +I SVG
Sbjct: 228 KGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQH 287
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+ Y M+ +NC PN+ T+ L+ G K + +AL ++ +L G+ P + L+
Sbjct: 288 ALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRSGLQPDIISYNITLK 347
Query: 416 PLCS 419
LCS
Sbjct: 348 GLCS 351
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 113/258 (43%), Gaps = 1/258 (0%)
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + +RV E+ SPD++ ++ ++ G R GRI D ++++ M KG + ++
Sbjct: 4 GDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKG-SQNVVSF 62
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N ++ G+ D+ + ++ M + TY +I G K+ + +L V E
Sbjct: 63 NIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAEG 122
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G V ++ + LC A+ + K GCK + Y L+ G K
Sbjct: 123 KGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDD 182
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ ++ EM Y +I GLC + A +++E L KG+ P + YS L
Sbjct: 183 AIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMK 242
Query: 521 KLLASNKLESAYNLFRKI 538
L +K+E A L+ ++
Sbjct: 243 GLCQGHKVEMALQLWNQV 260
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 100/225 (44%), Gaps = 1/225 (0%)
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+G ID A V+ M E PD YNA++ ++ VG +C ++ M + N+
Sbjct: 2 ESGDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKGSQ-NVV 60
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
++ ++ GL + +V A+ ++E M G V + T ++ C G + ++ + + A
Sbjct: 61 SFNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIA 120
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
G L AY ++ L K + + + M +SG + +Y +I G +
Sbjct: 121 EGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKF 180
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++A+ V E P+ + Y L N L + AY+L +++
Sbjct: 181 DDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEM 225
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 193/437 (44%), Gaps = 45/437 (10%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
Q +K + +E W N ++ + + GN G +L ++ N+A +V +
Sbjct: 67 LFQSMKREKRVEPDRWTYNT-----LISGLCSSGNTEGARKLL---SEMRDKNIAANVFT 118
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y+ I+K+L + + VL +M G NPD+ + VM F R+ + KA ++ +
Sbjct: 119 YSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV 178
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE 285
+ G K D NV +Y+I+I G +K+G++ E
Sbjct: 179 ESGYKPD---------------------------------NV-SYHILIHGLAKIGKLDE 204
Query: 286 MERVLKEIV--AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
++L E+ A G+ P+ +TFS LI GL R G ++ A+EVF +M E GC P+ Y +
Sbjct: 205 SLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTL 264
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD-RG 402
I+ + + ++ M+ P+ Y LI+G K + +A +++ EM G
Sbjct: 265 IAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAG 324
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
+ P+ T + ++ C G A + + G Y++L+ LS K L
Sbjct: 325 LQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEAL 384
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+++ +M+E + D + GLC G ++ A V E + + G P+ + LS L
Sbjct: 385 EVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESL 444
Query: 523 LASNKLESAYNLFRKIK 539
+ ++E A L K
Sbjct: 445 IKLGRVEDAQKLMEPAK 461
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 180/415 (43%), Gaps = 40/415 (9%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y+ +V++L + V M E P L T +++++S AG+ KA+ + +
Sbjct: 12 AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71
Query: 225 E-DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQ 282
+ + ++ D + N ++ LC + A L + M+ K + NV TY+ +I K +
Sbjct: 72 KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
E +VL+E++A G +PD F+ +++G R+ ++ A EV+ M E G PD +Y+
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191
Query: 343 VISNYISVGDFDECMK-------------------------------------YYKGMSS 365
+I +G DE +K + M
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
C+PN TYT LI+GL ++ KV A E+FE+M I P S + C G
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311
Query: 426 AMMMYKK-ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A +Y++ + G + ++ + L+ GK G +L EM G +D Y +I
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
AGL +L+ A+ V ++ K F + L + ++ AY +F +
Sbjct: 372 AGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATR 426
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 125/263 (47%), Gaps = 2/263 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
E++ + A++ +V +++ ++ L R + V M + G P+ T +
Sbjct: 204 ESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTT 263
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++ RA +V +A ++ ++ + DA + N ++ C+R + A L+ M G
Sbjct: 264 LIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGA 323
Query: 264 LFN--VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
++T+N +I G+ KLG++ ++ E+ +G + D+ T+ LI GL RA ++D+A
Sbjct: 324 GLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEA 383
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+EV+ M+EK D + + + G+ D+ ++ PN +T+ L
Sbjct: 384 LEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSES 443
Query: 382 LLKSRKVADALEVFEEMLDRGIV 404
L+K +V DA ++ E R I
Sbjct: 444 LIKLGRVEDAQKLMEPAKARDIT 466
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 104/246 (42%), Gaps = 38/246 (15%)
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD-------------- 373
M + C +AY+ V+ + G + ++ ++ M S +C P++
Sbjct: 1 MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60
Query: 374 ----------------------TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
TY LISGL S A ++ EM D+ I + T +
Sbjct: 61 FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
S ++ L P + + ++ GC + A+ +++ + +++ M ES
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 180
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEE-SLR-KGFCPSRLVYSKLSNKLLASNKLE 529
GY D Y +I GL IG+L+ ++ ++ E ++R G+ P+ + +S L + L + +LE
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELE 240
Query: 530 SAYNLF 535
A +F
Sbjct: 241 KALEVF 246
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 68/183 (37%), Gaps = 36/183 (19%)
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
MS C D Y ++ L K+ +A ALEVFE M VP
Sbjct: 1 MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVP----------------- 43
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ-ESGYPSDGEIYE 481
SL Y +L+ G+ G LDL+ M+ E D Y
Sbjct: 44 ------------------SLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYN 85
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
+I+GLC+ G E A ++ E K + YS + L+ K E +Y + ++ A
Sbjct: 86 TLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAA 145
Query: 542 RQN 544
N
Sbjct: 146 GCN 148
>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 766
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 173/375 (46%), Gaps = 1/375 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN ++ R +L DM G++P + SI++D + GQV KA+ ++ +
Sbjct: 326 YNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMV 385
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
+K + + + LC+ + S+F+++ + +V++YN +I+G+ +
Sbjct: 386 QSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMG 445
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+++ E+ G P+S TF+ LI G + R+D A+EVF M + G + N +
Sbjct: 446 SACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMA 505
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ G F E +K + PN TY +I L K +K A EV ML +
Sbjct: 506 DEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVF 565
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P + ++ P A+++Y K KVG S+ Y +L+ S K L
Sbjct: 566 PCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYL 625
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+ EM + G D I+ +IAG C +G +++A + EE + G P+ + Y+ L +
Sbjct: 626 FKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFK 685
Query: 525 SNKLESAYNLFRKIK 539
+++ A LF K+K
Sbjct: 686 IKRMDKADFLFNKMK 700
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 136/285 (47%), Gaps = 1/285 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++N ++ +R+ D V + M K GV ++ T +I+ D F R G ++A++++ +
Sbjct: 465 TFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEV 524
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+D G+ ++ + N+V+ LC+ A + M K V + YN +I G++K
Sbjct: 525 QDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNP 584
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ + +++ G P +T++ LI ++ +A +F M +KG PD + +
Sbjct: 585 TKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCI 644
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I+ + VGD Y+ MS + PN+ TYT LI G K +++ A +F +M +
Sbjct: 645 IAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNV 704
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
P T T+ + S G M+ + ++ G + TAY L
Sbjct: 705 TPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 144/312 (46%), Gaps = 6/312 (1%)
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
++++ F + A + + FGL+ + S N +L C + SLF +K
Sbjct: 182 NVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKD 241
Query: 262 K-VLFNVMTYNIVISGWSK--LGQ---VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
NV TY I+++ + K G+ +V+ VL+E+ G SP +T+ I GL RA
Sbjct: 242 SGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRA 301
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
G ++ A+ + ++ + ++ YNAVI + G+ E + + M S+ P +Y
Sbjct: 302 GCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSY 361
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
+ LI GL K +V AL++ EEM+ + PS T +S + LC G ++ M+
Sbjct: 362 SILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGA 421
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
G K + +Y L+ G L HEM+ +G + + +I G C +L+
Sbjct: 422 EGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDK 481
Query: 496 AVLVMEESLRKG 507
A+ V L+ G
Sbjct: 482 ALEVFTIMLKVG 493
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 181/418 (43%), Gaps = 41/418 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD-----SFIRAGQVYK 216
++ S N ++ +F+ ++ ++ G +P++ T +I+M+ SF + + K
Sbjct: 212 NILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVK 271
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVIS 275
A ++L +E G + + LC+ V A L ++ + N YN VI
Sbjct: 272 ATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIH 331
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
+ + G++ E +L+++ + G SP + ++S LI+GL + G+++ A+++ + M + P
Sbjct: 332 EFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKP 391
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
Y+++ G + + + + + + ++ +Y LI+G + R + A ++
Sbjct: 392 SLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLV 451
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
EM G VP++ T + C A+ ++ KVG +L++ ++ +
Sbjct: 452 HEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNRE 511
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE--------------------- 494
G L L +E+Q+ G + Y VI LC + E
Sbjct: 512 GHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHY 571
Query: 495 --------------NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
A+L+ + L+ G PS + Y+ L N +K++ AY LF+++
Sbjct: 572 NTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEM 629
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 117/281 (41%), Gaps = 7/281 (2%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+++ N++I +++ +V+ V + G + L+ +FL+ A + + +F
Sbjct: 177 SIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLF 236
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG------MSSYNCEPNMDTYTRLI 379
+ +K+ G P+ Y ++ NY G F + + K M P + TY I
Sbjct: 237 EELKDSGPSPNVFTY-TIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYI 295
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
GL ++ V AL + ++ R ++ + + C G H A + + R G
Sbjct: 296 HGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGIS 355
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+ +Y +L+ L G+ LDL EM +S Y + GLC G E ++ +
Sbjct: 356 PTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSM 415
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+G+ + Y+ L N + + SA L ++++
Sbjct: 416 FHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRM 456
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 175/362 (48%), Gaps = 2/362 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +V SYN ++ A R+K D V S+M ++G+ P+ T SI++D + +
Sbjct: 473 IGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVL 532
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNV--MTYNIVISG 276
+++ ++ ++ + ++ LC+ A L +M + F V M+YN +I G
Sbjct: 533 EVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDG 592
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K G++ +E+ A G SP+ +T++ L++GL + R+D A+E+ D MK KG D
Sbjct: 593 FIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLD 652
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
AY A+I + + + + + P+ Y LISG + AL++++
Sbjct: 653 IPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYK 712
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+ML G+ GT T+ ++ L G A +Y + + VG Y +++ LS G
Sbjct: 713 KMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKG 772
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ ++ ++ EM+++ + IY VIAG G L+ A + +E L KG P +
Sbjct: 773 QFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFD 832
Query: 517 KL 518
L
Sbjct: 833 IL 834
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 165/370 (44%), Gaps = 37/370 (10%)
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+ ++ + G++ KA ++L ++E G+ + S N V+ C++ ++ A ++F++M
Sbjct: 446 NTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLE 505
Query: 262 KVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
K L N TY+I+I G K + V+ ++ + + + + +I GL + G+
Sbjct: 506 KGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSK 565
Query: 321 AIEVFDTM-KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
A E+ M +EK +YN++I +I G+ D + Y+ M + PN+ TYT L+
Sbjct: 566 ARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLM 625
Query: 380 SGLLKSRKVADALE-----------------------------------VFEEMLDRGIV 404
GL K+ ++ ALE +F E+L+ G+
Sbjct: 626 DGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLN 685
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
PS S + + G AA+ +YKK K G + L Y L+ L G + DL
Sbjct: 686 PSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDL 745
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+ EMQ G D +Y ++ GL GQ V + EE + P+ L+Y+ +
Sbjct: 746 YTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYR 805
Query: 525 SNKLESAYNL 534
L+ A+ L
Sbjct: 806 EGNLDEAFRL 815
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 187/414 (45%), Gaps = 39/414 (9%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V N + AL +R + S M GV+ D T ++M + +R + +A+++
Sbjct: 197 VPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFS 256
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--NVMTYNIVISGWSKL 280
R + G + D+ ++ + C+ L++ A+SL MK K L + TY VI K
Sbjct: 257 RAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQ 316
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + + R E+V++G S + + + LI G + + A+++F M+ +G P++ +
Sbjct: 317 GNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTF 376
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +I + G+ ++ +++YK M S P++ +I G LK +K +AL++F+E +
Sbjct: 377 SVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFE 436
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK--------------------ARKVGCKL 440
G+ + + L LC G A + +K RK L
Sbjct: 437 TGLA-NVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDL 495
Query: 441 SLTAYKLLLRR------------LSGFGKC---GMLLDLWHEMQESGYPSDGEIYEYVIA 485
+ T + +L + + G K +L++ ++M S +G +Y+ +I
Sbjct: 496 ARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIIN 555
Query: 486 GLCNIGQLENAVLVMEESL-RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GLC +GQ A ++ + K FC S + Y+ + + + +++ A + ++
Sbjct: 556 GLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEM 609
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 103/201 (51%), Gaps = 3/201 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K+ V D+ +Y ++ ++ + + S++ +EG+NP + ++ F G
Sbjct: 644 MKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGN 703
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
+ A+ + ++ GL+ D + ++ L + ++ AS L+ M+ L + + Y +
Sbjct: 704 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTV 763
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+++G SK GQ V++ ++ +E+ +P+ L ++ +I G R G +D+A + D M +KG
Sbjct: 764 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 823
Query: 333 CGPDTNAYNAVISNYISVGDF 353
PD ++ ++S VG F
Sbjct: 824 ILPDGATFDILVSG--KVGKF 842
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 97/244 (39%), Gaps = 36/244 (14%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
GF +S F++L+ + + D A+++ + M E G P N +S + E
Sbjct: 157 GFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEA 216
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
+ Y M + + + T L+ L+ K A+ALEVF ++RG P +
Sbjct: 217 KELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDS--------- 267
Query: 417 LCSYGPPHAAMMMYKKARKVGCK-LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
++Y A + CK L+L LLR + C PS
Sbjct: 268 -----------LLYSLAVQACCKTLNLAMANSLLREMKEKKLC--------------VPS 302
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
E Y VI G +E+A+ +E + G + + + L +N L SA +LF
Sbjct: 303 Q-ETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLF 361
Query: 536 RKIK 539
K++
Sbjct: 362 YKME 365
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 174/378 (46%), Gaps = 2/378 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D ++ +++ L ++ M EG P++ T +++ + G AI++L
Sbjct: 138 DTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLL 197
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+E + D ++ LC+ V A +LF+ M G+ + ++ TY +I L
Sbjct: 198 RSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNL 257
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ + +L +++ PD + FS +++ L + G+I +A +V D M +G P+ Y
Sbjct: 258 CEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTY 317
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
NA++ + + DE +K + M PN+ +Y LI+G K +++ A +FEEM
Sbjct: 318 NALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQ 377
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+ ++P+T T + + C G A+ ++ + G L Y++LL L
Sbjct: 378 KELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDE 436
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ L ++ S D +IY VI G+C G+LE A + KG P+ Y+ + N
Sbjct: 437 AMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMIN 496
Query: 521 KLLASNKLESAYNLFRKI 538
L L+ A LF ++
Sbjct: 497 GLCRRGLLDEANKLFMEM 514
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 176/399 (44%), Gaps = 8/399 (2%)
Query: 143 GEAMVLFFNWAIK--HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
G+A+ LF + PNV +Y ++ L + + +L M + PD+
Sbjct: 156 GDALHLFDKMIGEGFQPNVV----TYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVV 211
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM- 259
+ ++DS + QV +A + ++ G+ D + ++ LC ++L N M
Sbjct: 212 YTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI 271
Query: 260 KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
K++ +V+ ++ V+ K G++ E V+ ++ G P+ +T++ L++G +D
Sbjct: 272 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMD 331
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
+A++VFDTM G P+ +YN +I+ Y + D+ ++ M PN TY L+
Sbjct: 332 EAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM 391
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
R + DA+ +F EM+ G +P T L+ LC AM + K
Sbjct: 392 HXCHVGR-LQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMD 450
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+ Y +++ + G+ D++ + G + Y +I GLC G L+ A +
Sbjct: 451 PDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKL 510
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
E G P Y+ ++ LL + + A L +++
Sbjct: 511 FMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEM 549
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 131/273 (47%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V T NI+I+ + L ++ VL +I+ G PD+ TF+ LI GL G+I DA+ +F
Sbjct: 103 DVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLF 162
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M +G P+ Y +I+ VG+ + ++ + M NC+P++ YT +I L K
Sbjct: 163 DKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKD 222
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
R+V +A +F +M+ +GI P T TS + LC+ + + + +
Sbjct: 223 RQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIF 282
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
++ L GK D+ M G + Y ++ G C +++ AV V + +
Sbjct: 283 STVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVH 342
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G+ P+ + Y+ L N +++ A LF ++
Sbjct: 343 NGYAPNVISYNTLINGYCKIQRMDKATYLFEEM 375
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 156/332 (46%), Gaps = 2/332 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D+ +Y ++ +L + + +L+ M + PD+ S V+D+ + G++ +A
Sbjct: 240 ISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAH 299
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ + G++ + + N ++ C + + A +F++M NV++YN +I+G+
Sbjct: 300 DVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGY 359
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K+ ++ + + +E+ + P+++T++ L+ GR+ DAI +F M G PD
Sbjct: 360 CKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXC-HVGRLQDAIALFHEMVAHGQIPDL 418
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y ++ DE M K + N +P++ YT +I G+ ++ ++ A ++F
Sbjct: 419 ATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSN 478
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ +G+ P+ T T + LC G A ++ + GC Y + + L +
Sbjct: 479 LSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKE 538
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ L EM G+ +D ++ LC+
Sbjct: 539 ALRAIQLLQEMLARGFSADVSTTTLLVEMLCD 570
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 146/338 (43%), Gaps = 44/338 (13%)
Query: 89 SRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNL-SGEAMV 147
++ ++ ++P+ + + L +G I +A V++ + V VV L G +
Sbjct: 268 NQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQ 327
Query: 148 LFFNWAIK------HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
+ A+K H A +V SYN ++ + + D + +M ++ + P+ T
Sbjct: 328 SEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTY 387
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+ +M G++ AI + + G D + ++L LC++ H+ A +L +++G
Sbjct: 388 NTLMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEG 446
Query: 262 KVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
+ ++ Y IVI G + G++ + + ++G P+ T++ +I GL R G +D+
Sbjct: 447 SNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDE 506
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A ++F M GC PD YN +
Sbjct: 507 ANKLFMEMDGNGCSPDGCTYNTI-----------------------------------TQ 531
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
GLL++++ A+++ +EML RG T T +E LC
Sbjct: 532 GLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 569
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 113/278 (40%), Gaps = 3/278 (1%)
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
+N +++ +K Q + + ++ + G PD T + LI R+ A V +
Sbjct: 72 FNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKIL 131
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
+ G PDT + +I G + + + M +PN+ TY LI+GL K
Sbjct: 132 KLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN 191
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
A+ + M P TS ++ LC A ++ K G + Y L+
Sbjct: 192 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLI 251
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
L + + L ++M S D I+ V+ LC G++ A V++ + +G
Sbjct: 252 HSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVE 311
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYA 547
P+ + Y+ L + ++++ A +F + N YA
Sbjct: 312 PNVVTYNALMDGHCLQSEMDEAVKVFDTMV---HNGYA 346
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 2/201 (0%)
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
++N S ++ D+ + + M + P+ + RL++ + K+++ + +M
Sbjct: 36 SHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQM 95
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
GI P T+ + C A + K K+G + + L+R L GK
Sbjct: 96 DSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKI 155
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRLVYSK 517
G L L+ +M G+ + Y +I GLC +G NA + + S+ +G C P +VY+
Sbjct: 156 GDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGN-TNAAIRLLRSMEQGNCQPDVVVYTS 214
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ + L ++ A+NLF K+
Sbjct: 215 IIDSLCKDRQVTEAFNLFSKM 235
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 101/252 (40%), Gaps = 35/252 (13%)
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN---------- 367
+DDA+ F+ M P T +N ++++ + M S+
Sbjct: 50 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109
Query: 368 -----C--------------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
C +P+ T+T LI GL K+ DAL +F++M+ G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P+ T + + LC G +AA+ + + + C+ + Y ++ L +
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+L+ +M G D Y +I LCN+ + ++ ++ + + P +++S + + L
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289
Query: 523 LASNKLESAYNL 534
K+ A+++
Sbjct: 290 CKEGKITEAHDV 301
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 188/406 (46%), Gaps = 27/406 (6%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K V DV +Y +++ + + + + +M G +P++ T + ++ +++++ Q
Sbjct: 478 MKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQ 537
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK----------- 262
+ +A + R+ D +A + + ++ LC+ + A ++ + G
Sbjct: 538 LIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFE 597
Query: 263 ------VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
+ NV+TY +I G K +V + +L ++A G P+ + + LI+G + G
Sbjct: 598 GNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIG 657
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
+ID+A EVF M + G P + Y ++I G D MK M + +C PN+ TYT
Sbjct: 658 KIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYT 717
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+I GL K ++ AL + M ++G P+ T T+ ++ L G A++ ++K+
Sbjct: 718 AMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSK 777
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWH----EMQESGYPSDGEIYEYVIAGLCNIGQ 492
GC + Y++L+ G LLD H EM+ + +P + Y + G +
Sbjct: 778 GCAPNYVTYRVLINHCCAAG----LLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSK--K 831
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++ ++EE P VY L + + +LE+A L +++
Sbjct: 832 FIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKEL 877
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/467 (22%), Positives = 213/467 (45%), Gaps = 37/467 (7%)
Query: 104 GVFLQKLKGKGVIEDAL-------WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKH 156
G F Q L G DAL +N++ L ++ ++ +L EAM F ++
Sbjct: 243 GYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLM-EASLFNEAMS--FLHRMRC 299
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
+ +V +Y ++ ++K F + +++ M EG NP+ + ++ + AG
Sbjct: 300 NSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAY 359
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVI-- 274
A ++ R+ G + N+ + +C + + A L + KV ++ + V+
Sbjct: 360 AYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELL--DLVEKVYEEMLAASCVLNK 417
Query: 275 ---SGWSK----LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+ +S+ +G+ + ++LKE++ +GF PD+ T++ +I L +A +++ + +F
Sbjct: 418 VNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQE 477
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
MK G PD Y +I ++ G ++ ++ M S C PN+ TYT L+ LKS++
Sbjct: 478 MKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQ 537
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG---------- 437
+ A ++F M+D P+ T ++ ++ LC G A +Y+K
Sbjct: 538 LIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFE 597
Query: 438 ----CKLS--LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
C ++ + Y L+ L K +L M +G + +Y+ +I G C IG
Sbjct: 598 GNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIG 657
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+++NA V + G+ PS Y+ L +++ +L+ A + ++
Sbjct: 658 KIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEM 704
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 168/373 (45%), Gaps = 17/373 (4%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
+L +M ++G PD T + V+ +A +V K+ + ++ G+ D + +++
Sbjct: 438 QILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSF 497
Query: 244 CQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C+ + A S F+ M+ NV+TY ++ + K Q+++ + +V P++
Sbjct: 498 CKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNA 557
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTM--------------KEKGC--GPDTNAYNAVISN 346
+T+S LI+GL +AG I A EV++ + C P+ Y A+I
Sbjct: 558 VTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDG 617
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
+ + M + CEPN Y LI G K K+ +A EVF M G +PS
Sbjct: 618 LCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPS 677
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
T TS ++ + G AM + + C ++ Y ++ LS G+ L+L
Sbjct: 678 VHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLS 737
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
M+E G + Y +I GL G+ + ++ + ++ KG P+ + Y L N A+
Sbjct: 738 LMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAG 797
Query: 527 KLESAYNLFRKIK 539
L+ A+ L ++K
Sbjct: 798 LLDEAHLLLDEMK 810
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 174/413 (42%), Gaps = 51/413 (12%)
Query: 142 SGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
S E V FF WA + + Y+ + + LG F+ + +E D E L
Sbjct: 113 SPELCVRFFLWAERQVGYSHTGACYDALAEILG----FEDPARTAERLLREIGEDDREVL 168
Query: 202 SIVMDSFIR----AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+++ +R G +A++ LGRL+DFG + A
Sbjct: 169 RRLLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSA------------------------ 204
Query: 258 SMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
+TYN ++ + GQV RV KE+ A GF D T + + L + GR
Sbjct: 205 ----------VTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGR 254
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
DA+ + ++++ DT +IS + F+E M + M +C PN+ TY
Sbjct: 255 WADAL---NMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRT 311
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
L+SG LK ++ + M+ G P+ S + C+ G A ++ + G
Sbjct: 312 LLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCG 371
Query: 438 CKLSLTAYKLLLRRLSGFGKC--GMLLDLWHEMQESGYPSDGEIYEYVIAG----LCNIG 491
AY + + + G + LLDL ++ E + + + A LC +G
Sbjct: 372 SPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVG 431
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
+ E A +++E +RKGF P Y+K+ L + K+E ++ LF+++K A N
Sbjct: 432 KFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVN 484
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 160/378 (42%), Gaps = 35/378 (9%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+A +V +Y ++ L + + +L M G P+ ++D F + G++ A
Sbjct: 603 TIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNA 662
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG 276
++ R+ G + ++ + + + A + + M NV+TY +I G
Sbjct: 663 QEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDG 722
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
SK+G++ + +L + +G SP+ +T++ LI+GLG+ G+ D ++++F M KGC P+
Sbjct: 723 LSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPN 782
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y +I++ + G DE M + ++ Y + G S+K +L + E
Sbjct: 783 YVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGF--SKKFIASLGLLE 840
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
EM VP ++ G A+ ++K+ +V L++T+
Sbjct: 841 EMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTST----------- 889
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
GM Y +I LC Q+E A + E RKG P +V+
Sbjct: 890 --GM-------------------YASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFV 928
Query: 517 KLSNKLLASNKLESAYNL 534
L L+ NK + A L
Sbjct: 929 SLVKGLIEVNKWDEALQL 946
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 101/272 (37%), Gaps = 72/272 (26%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +Y ++ + + D VLS+M + NP++ T + ++D + G++ KA+ +L
Sbjct: 678 VHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLS 737
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+E+ G + + ++ L + A+ LF M K N +TY ++I+ G
Sbjct: 738 LMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAG 797
Query: 282 QVVEMERVLKEI--------------VAEGFS-------------------PDSLTFSFL 308
+ E +L E+ +GFS P + + L
Sbjct: 798 LLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGML 857
Query: 309 IEGLGRAGRIDDAIEV--------------------------------------FDTMKE 330
I+ +AGR++ A+E+ + M
Sbjct: 858 IDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTR 917
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
KG PD + +++ I V +DE ++ G
Sbjct: 918 KGIVPDLIVFVSLVKGLIEVNKWDEALQLCYG 949
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 171/371 (46%), Gaps = 1/371 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y+VI++A R F VL D+ G D+ ++V+++ G V KA+ +L L
Sbjct: 160 YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLP 219
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVV 284
FG + D S N VL LC G L M + N++T+N +IS + G
Sbjct: 220 SFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFE 279
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ VL ++ G +PD ++ +I+G+ + G + A E+ + M G P+ YN ++
Sbjct: 280 RVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLL 339
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
S ++E + M +C + T+ L+ ++ V +E+ E+ML G +
Sbjct: 340 KGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCM 399
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P T T+ + C G A+M+ K GCK + +Y ++L+ L + DL
Sbjct: 400 PDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDL 459
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+M + G P + + +I LC G +E A+ ++++ L G P + YS + + L
Sbjct: 460 MSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGK 519
Query: 525 SNKLESAYNLF 535
+ K + A L
Sbjct: 520 AGKTDEALELL 530
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 176/378 (46%), Gaps = 1/378 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
++ ++N ++ L R F+ + VL+ MA+ G PD+ + ++D + G + A ++L
Sbjct: 261 NIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEIL 320
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
R+ +GLK + N +L LC L M K + +T+NI++ + +
Sbjct: 321 NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQN 380
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G V + +L++++ G PD +T++ +I G + G ID+A+ + +M GC P+T +Y
Sbjct: 381 GLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 440
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
V+ S + + M C N T+ LI+ L K V A+E+ ++ML
Sbjct: 441 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 500
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G P + ++ ++ L G A+ + G + Y + LS G+
Sbjct: 501 NGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINK 560
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
++ ++ +Q++ SD +Y VI+ LC G+ E A+ + + G P+ Y+ L
Sbjct: 561 VIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIR 620
Query: 521 KLLASNKLESAYNLFRKI 538
L + ++ A + ++
Sbjct: 621 GLASEGFVKEAQEMLTEL 638
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 141/333 (42%), Gaps = 6/333 (1%)
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLF 265
+ RAGQ+ A ++ + + +A + V+ LC R + A ++ + M +G
Sbjct: 100 YCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPI 156
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
M Y++++ + G RVL+++ A G + D + ++ + G +D A+ +
Sbjct: 157 PPM-YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLL 215
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ GC PD +YNAV+ + + + M C PN+ T+ LIS L ++
Sbjct: 216 RDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRN 275
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
EV +M + G P + ++ +C G A + + G K ++ Y
Sbjct: 276 GLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCY 335
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
LL+ L + +L EM + P D + ++ C G ++ + ++E+ L
Sbjct: 336 NTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLV 395
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P + Y+ + N ++ A L + +
Sbjct: 396 HGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 428
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 116/269 (43%), Gaps = 3/269 (1%)
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
YN +++G+ + GQ +E + A P++ T+ ++ L GRI DA+ V D M
Sbjct: 93 YNAMVAGYCRAGQ---LESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
+GC P Y+ ++ G F ++ + + + C ++ +++ + V
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
AL + ++ G P + + L+ LC + ++ ++ C ++ + L+
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
L G + ++ +M E G D +Y +I G+C G L+ A ++ G
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ + Y+ L L ++ + E L ++
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEM 358
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 163/344 (47%), Gaps = 1/344 (0%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P++E + ++D+ + V +A + + G+ D + +++ C + A L
Sbjct: 197 PNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGL 256
Query: 256 FNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
N M K + NV TYNI++ K G+V E + VL ++ PD +T+S L++G
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFL 316
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
+ A VF+ M G PD ++Y +I+ + DE + +K M N P + T
Sbjct: 317 VYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y+ LI GL KS +++ ++ +EM DRGI + T S ++ LC G A+ ++ K +
Sbjct: 377 YSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMK 436
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G + + +LL L G+ + + ++ GY D Y +I G C G LE
Sbjct: 437 DQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLE 496
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
A+ ++ + G P+ + + + N L ++ + A L R++
Sbjct: 497 EALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 182/417 (43%), Gaps = 36/417 (8%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D+ + N+++ F +VL+ + K G P T + ++ GQV KA+
Sbjct: 90 IQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKAL 149
Query: 219 QMLGRLEDFGLKFD-----------------------------------AESLNVVLWCL 243
+L G+KFD E N ++ L
Sbjct: 150 HFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDAL 209
Query: 244 CQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C+ V A LF+ M K + +V+TY +I G+ ++ E +L E+V + +P+
Sbjct: 210 CKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNV 269
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
T++ L++ L + G++ +A V M + PD Y+ ++ Y V + + +
Sbjct: 270 YTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNA 329
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
MS P++ +YT LI+G K++ V +AL +F+EM + +VP T +S ++ LC G
Sbjct: 330 MSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
+ + R G ++ Y L+ L G + L+++M++ G +
Sbjct: 390 ISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTI 449
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ GLC G+L++A ++ L KG+ Y+ + N LE A + K++
Sbjct: 450 LLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKME 506
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 170/412 (41%), Gaps = 36/412 (8%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR------------ 210
+ +N I+ + + K + ++ + +G+ PDL TL+I+++ F
Sbjct: 59 IIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 211 -----------------------AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
GQV KA+ +L G+KFD S ++ +C+
Sbjct: 119 KILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIG 178
Query: 248 HVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
A L + G++ NV YN +I K V E + E+ A+G S D +T++
Sbjct: 179 DTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYT 238
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
LI G A ++ +AI + + M K P+ YN ++ G E M
Sbjct: 239 TLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKA 298
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
+P++ TY+ L+ G ++ A VF M G+ P + T + C A
Sbjct: 299 CVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEA 358
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ ++K+ + + Y L+ L G+ + DL EM++ G P++ Y +I G
Sbjct: 359 LNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDG 418
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
LC G L+ A+ + + +G P ++ L + L +L+ A F+ +
Sbjct: 419 LCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDL 470
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 167/352 (47%), Gaps = 11/352 (3%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V+ YN I+ AL + + + S+M +G++ D+ T + ++ F A ++ +AI +L
Sbjct: 198 NVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLL 257
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ + + + N+++ LC+ V A ++ M K V +V+TY+ ++ G+ +
Sbjct: 258 NEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLV 317
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
++ + + V + G +PD +++ LI G + +D+A+ +F M +K P Y
Sbjct: 318 YELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTY 377
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+++I G M N+ TY LI GL K+ + A+ +F +M D
Sbjct: 378 SSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKD 437
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+GI P + T T L+ LC G A ++ G L + Y ++ ++G K G+
Sbjct: 438 QGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVM---INGHCKQGL 494
Query: 461 L---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
L L + +M+E+G + ++ +I L + + A E+ LR+ C
Sbjct: 495 LEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKA----EKLLRQMIC 542
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 128/297 (43%), Gaps = 38/297 (12%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ L +K N +V +YN++V AL + NVL+ M K V PD+ T S
Sbjct: 252 EAIGLLNEMVLKTIN--PNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYST 309
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
+MD + ++ KA + + G+ D S +++ C+ V A +LF M K
Sbjct: 310 LMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKN 369
Query: 263 -----------------------------------VLFNVMTYNIVISGWSKLGQVVEME 287
+ NV+TYN +I G K G +
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAI 429
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
+ ++ +G P S TF+ L++GL + GR+ DA E F + KG D YN +I+ +
Sbjct: 430 ALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGH 489
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
G +E + M C PN T+ +I+ L K + A ++ +M+ RG++
Sbjct: 490 CKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 154/350 (44%), Gaps = 9/350 (2%)
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
P + + ++DSF + A+ + RLE G++ D +LN+++ C C H+G +
Sbjct: 56 TPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFC---HMGQITF 112
Query: 255 LFNSMKGKVL-----FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
F S+ K+L + +T+ +I G GQV + +++A+G D +++ LI
Sbjct: 113 GF-SVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLI 171
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
G+ + G AI++ + + P+ YN +I E + M++
Sbjct: 172 NGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGIS 231
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
++ TYT LI G + K+ +A+ + EM+ + I P+ T ++ LC G A +
Sbjct: 232 ADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNV 291
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
K K + Y L+ + +++ M G D Y +I G C
Sbjct: 292 LAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCK 351
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ A+ + +E +K P + YS L + L S ++ ++L +++
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMR 401
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/274 (17%), Positives = 112/274 (40%)
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
++ +N ++ ++K+ + + +G PD +T + LI G+I V
Sbjct: 59 IIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
+ ++G P T + +I G ++ + ++ + + + + +Y LI+G+ K
Sbjct: 119 KILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIG 178
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
A+++ ++ R P+ + ++ LC Y A ++ + G + Y
Sbjct: 179 DTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYT 238
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+ K + L +EM + Y ++ LC G+++ A V+ L+
Sbjct: 239 TLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKA 298
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
P + YS L + +L+ A ++F + +
Sbjct: 299 CVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSL 332
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 91/227 (40%)
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
+DDA+ F+ M P +N ++ ++ + + + + +P++ T
Sbjct: 40 VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
LI+ ++ V ++L RG P T T T+ ++ LC G + A+ + K G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
K +Y L+ + G + L ++ + E+Y +I LC + A
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
+ E KG + Y+ L ++KL+ A L ++ + N
Sbjct: 220 GLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTIN 266
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 180/381 (47%), Gaps = 2/381 (0%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A DV SY ++K L K D C + + G +P++ + V+D ++AG++ ++
Sbjct: 360 ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLK 419
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
+ + VV+ LC+ + A +F M K + + +TY +I G+S
Sbjct: 420 NFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFS 479
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K ++ E ++L ++ +G P ++T+ ++ G + I++A EV M+E+GC P
Sbjct: 480 KASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLF 539
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
+ +++S Y+S G +E + M++ C P++ YT LI L + +V +A VF+ M
Sbjct: 540 IFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM 599
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+++G P T + ++ G AA + + K G AY L+ +
Sbjct: 600 IEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERV 659
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV-YSK 517
++ M SG + + ++ GL G+ + A + +E L K P LV Y+
Sbjct: 660 DQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTI 719
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L + L + ++ A++ F+++
Sbjct: 720 LIDGLGKAGRVSEAFSQFQEM 740
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 154/336 (45%), Gaps = 5/336 (1%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
PD++T +I++ F RA ++ A+++ L +G K +A + ++ L + A +
Sbjct: 297 PDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAF 356
Query: 256 FNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
F+ +V++Y VI G + ++ E + +++ G SP+ + ++ +I+GL +A
Sbjct: 357 FDEA-----LDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKA 411
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
GRI+D ++ F+ M C P Y VI + K ++ M C P+ TY
Sbjct: 412 GRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITY 471
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
T LI G K+ K+ +A ++ + ML +G P+ T S + C + A + + R+
Sbjct: 472 TTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRE 531
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
GC+ L + LL G+ + EM G D +Y +I L + G++
Sbjct: 532 RGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPE 591
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
A V + + KG P L Y + +E+A
Sbjct: 592 ARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAA 627
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 123/283 (43%), Gaps = 34/283 (12%)
Query: 290 LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYIS 349
LKE+ G PD + + ++ GL +A +ID AIE+F M GC P +YN VIS S
Sbjct: 8 LKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLAS 67
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR----------------------- 386
+ DE K++ M CEP++ +T LI G K+
Sbjct: 68 IDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLY 127
Query: 387 --------KVAD---ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
K D ++ EEML G +P ++PLC G A ++++ RK
Sbjct: 128 TSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRK 187
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
GC + L+ LS GK +L+ EM E GY E+ + +I LC G+++
Sbjct: 188 SGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDE 247
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
A + + + K SR+ Y+ L + +++ L ++
Sbjct: 248 ANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQM 290
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 155/353 (43%), Gaps = 2/353 (0%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
+ L +M G+ PD+ +IV++ +A ++ KAI++ + G + S N V+ L
Sbjct: 6 DCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGL 65
Query: 244 CQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
+ A FNSM +V+ + +I G+ K GQ +L + + F PD
Sbjct: 66 ASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-FRPDV 124
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
++ +I G +AG +D ++ + M GC PD AY +I +G DE + ++
Sbjct: 125 FLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFER 184
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M C + T+ LI L K+ +A E++ EM++RG P S + LC G
Sbjct: 185 MRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGK 244
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A +Y+ S AY L+ G+ L L +M E D + Y
Sbjct: 245 VDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNI 304
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
++AG +L++A+ + + G P+ Y+ + L + ++E A F
Sbjct: 305 LVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFF 357
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 169/380 (44%), Gaps = 6/380 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV + N+++ L + + D + +M G P + + + V+ ++ +A +
Sbjct: 19 DVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFF 78
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLG 281
+ D G + D + ++ C+ L N + +V Y VI G+ K G
Sbjct: 79 NSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKAG 138
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ ++L+E++A G PD+ + LI+ L + GR+D+A E+F+ M++ GC D +
Sbjct: 139 DLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFM 198
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I + G DE + Y+ M EP ++ LI L K+ KV +A E+++ ++ +
Sbjct: 199 TLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAK 258
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
+ S S ++ C G + + + + + Y +L+ S +
Sbjct: 259 KVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDA 318
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+L+ + G + Y +I GL + ++E A +E+L + Y+ +
Sbjct: 319 LELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKG 372
Query: 522 LLASNKLESAYNLFRKIKIA 541
L S +++ A LF K+K A
Sbjct: 373 LADSKRIDEACELFEKLKTA 392
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 139/310 (44%), Gaps = 2/310 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y IV + + V++ M + G P L + ++ ++ G+ +A Q+L +
Sbjct: 505 TYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEM 564
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
G D ++ L V A +F+SM K + +TY +I +SK+G V
Sbjct: 565 TARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNV 624
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+L+ + G PD ++ L++G + R+D A V+D M G P+ +N +
Sbjct: 625 EAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVL 684
Query: 344 ISNYISVGDFDECMKYYKGMSSYN-CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+ G D +K M + P + +YT LI GL K+ +V++A F+EM+DRG
Sbjct: 685 MHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRG 744
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
I+P T TS + L G A + + K+G + AY L+ L
Sbjct: 745 IIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAW 804
Query: 463 DLWHEMQESG 472
D++ EM + G
Sbjct: 805 DVFQEMMKRG 814
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 124/252 (49%), Gaps = 3/252 (1%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A D +Y I++ + + +L MAK GV PD + +MD +++ +V +A
Sbjct: 605 APDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFG 664
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGW 277
+ R+ G+K +A + NV++ L + A SLF M K +V +++Y I+I G
Sbjct: 665 VYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGL 724
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G+V E +E++ G P+ T++ LI L +AGRI +A ++ + M + G PD
Sbjct: 725 GKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDV 784
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
AY+A+I+ I D ++ M C PN TY L G + + D LE ++
Sbjct: 785 QAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD-LEAVKQ 843
Query: 398 MLDRGIVPSTGT 409
+G+ G+
Sbjct: 844 HFSQGVAMEAGS 855
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 146/329 (44%), Gaps = 16/329 (4%)
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVI 274
+A+ L + GL D + N+VL LC+ + A LF M +++YN VI
Sbjct: 3 EALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVI 62
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR-------IDDAIEVFDT 327
SG + + ++ E + ++ G PD + F+ LI G +AG+ ++ A++ F
Sbjct: 63 SGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFR- 121
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
PD Y +VI Y GD D K + M + C P+ Y LI L K +
Sbjct: 122 -------PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGR 174
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
V +A E+FE M G + T + +E L ++G A +Y++ + G + L
Sbjct: 175 VDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDS 234
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L+ L GK +++ + + Y ++ G C +G++++ + ++ + +
Sbjct: 235 LIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECD 294
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFR 536
P Y+ L +N+L+ A LF+
Sbjct: 295 NFPDIQTYNILVAGFSRANRLDDALELFK 323
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 117/228 (51%), Gaps = 2/228 (0%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
+V M ++G PD T ++ +F + G V A ++L + G+ D + N ++
Sbjct: 594 HVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGY 653
Query: 244 CQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
+ V A +++ M + N +T+N+++ G K G+ + KE++ + P +
Sbjct: 654 VKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPT 713
Query: 303 L-TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
L +++ LI+GLG+AGR+ +A F M ++G P+ + Y ++I + G E K +
Sbjct: 714 LVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVE 773
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
M P++ Y+ LI+GL+ S V A +VF+EM+ RG P+ T
Sbjct: 774 DMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVT 821
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 110/270 (40%), Gaps = 35/270 (12%)
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
+++A++ M G PD N V++ D+ ++ + M S CEP + +Y
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK-- 435
+ISGL K+ +A + F M+D G P T+ + C G P M+ +A K
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120
Query: 436 --------------------------------VGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
GC AY +L+ L G+ +
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L+ M++SG D + +I L N G+L+ A + E + +G+ P V L L
Sbjct: 181 LFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALC 240
Query: 524 ASNKLESAYNLFRKIKIARQNDYARRLWRS 553
+ K++ A +++ + +A++ +R + S
Sbjct: 241 KAGKVDEANEIYQTV-VAKKVATSRVAYNS 269
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F ++ V + SY +++ LG+ + +M G+ P+ T + ++ S
Sbjct: 700 LFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSL 759
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS-MKGKVLFNV 267
+AG++ +A +++ + G+ D ++ + ++ L V A +F MK N
Sbjct: 760 AKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNE 819
Query: 268 MTYNIVISGWSKLGQVVEMERV 289
+TY ++ G+ G+ +++E V
Sbjct: 820 VTYKVLRRGFRAAGRALDLEAV 841
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 176/390 (45%), Gaps = 2/390 (0%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
FN AIK + +V ++N+++ F L+ M K +PD T + ++D+
Sbjct: 196 FNDAIKL-GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLC 254
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVM 268
+ G++ A +L ++ GL + + N++++ C+ + A+++ M + +L +V
Sbjct: 255 KKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVW 314
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TYN++I+G G++ E ++ E+ PD ++++ LI G +I +A ++ + M
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
EKG P+ +N ++ Y G D+ M P+ TY LI+G K+ +
Sbjct: 375 SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNM 434
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A +EM + + + T+ + L LC A + ARK G + +Y L
Sbjct: 435 GEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTL 494
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ G L LW EM+E Y +I GLC G+ E A+ + E L G
Sbjct: 495 IVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGL 554
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P Y+ + + +E A+ K+
Sbjct: 555 LPDETTYNTILHGYCREGDVEKAFQFHNKM 584
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 188/429 (43%), Gaps = 37/429 (8%)
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
V F N K+ N + D +YN I+ L ++ ++L DM G+ P+ T +I++
Sbjct: 228 VEFLNVMGKY-NCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVY 286
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLF 265
+ + G + +A ++ + L D + N+++ LC + A L + M+ K+L
Sbjct: 287 GYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLP 346
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V++YN +I+G + ++ E ++L+E+ +G P+++T + +++ + G++DDA
Sbjct: 347 DVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTI 406
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT----------- 374
M+E G PD YN +I+ Y G+ E + M N + + T
Sbjct: 407 TKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCRE 466
Query: 375 ------------------------YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
Y LI G K V AL++++EM ++ I+PST T
Sbjct: 467 KKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTY 526
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+ LC G A+ + + G T Y +L G ++M E
Sbjct: 527 NCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE 586
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
+ + D ++ GLC G LE A+ + + KG + Y+ L L +L+
Sbjct: 587 NSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDD 646
Query: 531 AYNLFRKIK 539
A+NL +++
Sbjct: 647 AFNLLSEME 655
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 174/382 (45%), Gaps = 1/382 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N+ DV +YN+++ L + + +M + PD+ + + +++ + ++ +A
Sbjct: 308 NLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEA 367
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISG 276
++L + + G+K +A + N+++ C+ + AS+ M+ + +TYN +I+G
Sbjct: 368 FKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLING 427
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K G + E R + E+ + DS+T + ++ L R ++++A ++ + +++G D
Sbjct: 428 YCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFID 487
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+Y +I Y G+ D +K + M P+ TY +I GL + K A+
Sbjct: 488 EVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLN 547
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
E+L+ G++P T + L C G A + K + K + +LLR L G
Sbjct: 548 ELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEG 607
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
L L++ G D Y +I LC G+L++A ++ E K P Y+
Sbjct: 608 VLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYN 667
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
+ L S ++ A K+
Sbjct: 668 AIITALTDSGRIREAEEFMSKM 689
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 155/354 (43%), Gaps = 1/354 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV SYN ++ +L +M+++GV P+ T +I++ + + G++ A +
Sbjct: 347 DVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTI 406
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
++E+ G D + N ++ C+ ++G A + M K + + +T N ++ +
Sbjct: 407 TKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCRE 466
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
++ E ++L G+ D +++ LI G + G +D A++++D MKEK P T Y
Sbjct: 467 KKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTY 526
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I G ++ + + P+ TY ++ G + V A + +M++
Sbjct: 527 NCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE 586
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
P T L LC G A+ ++ G + Y L+ L G+
Sbjct: 587 NSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDD 646
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+L EM+E D Y +I L + G++ A M + L KG P +++
Sbjct: 647 AFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVL 700
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 173/393 (44%), Gaps = 24/393 (6%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V + ++N++VK + D N ++ M + G +PD T + +++ + +AG + +A
Sbjct: 379 VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAF 438
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+ + + +K D+ +LN +L LC+ + A L +S + + F + ++Y +I G+
Sbjct: 439 RTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGY 498
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G V ++ E+ + P ++T++ +I GL + G+ + AI + + E G PD
Sbjct: 499 FKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDE 558
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN ++ Y GD ++ +++ M + +P++ T L+ GL + AL++F
Sbjct: 559 TTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNT 618
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ +G T T + + LC G A + + + Y ++ L+ G+
Sbjct: 619 WVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGR 678
Query: 458 CGMLLDLWHEMQESGYPSDGEI-----------------------YEYVIAGLCNIGQLE 494
+ +M E G D + Y I LC G+ +
Sbjct: 679 IREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYK 738
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
+A+ + ES +KG + Y L + L+ K
Sbjct: 739 DAMRIFGESKQKGITVDKSTYINLMDGLIKRRK 771
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 160/362 (44%), Gaps = 10/362 (2%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIR---AGQVYKAIQMLGRLEDFGLKFDAESLNVVLW 241
+ M + + P+L T + +++S +R + V + + G+ + + N+V++
Sbjct: 157 IFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIY 216
Query: 242 CLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
C A N M K + +TYN ++ K G++ + +L ++ + G P
Sbjct: 217 GYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLP 276
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
+ T++ L+ G + G + +A V + M + PD YN +I+ + G +E K
Sbjct: 277 NRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLR 336
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
M + P++ +Y LI+G L+ K+++A ++ EEM ++G+ P+ T ++ C
Sbjct: 337 DEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKE 396
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS---DG 477
G A K + G Y L ++G+ K G + + + M E G + D
Sbjct: 397 GKMDDASNTITKMEESGFSPDCVTYNTL---INGYCKAGNMGEAFRTMDEMGRKNMKMDS 453
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
++ LC +LE A ++ + ++G+ + Y L ++ A L+ +
Sbjct: 454 VTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDE 513
Query: 538 IK 539
+K
Sbjct: 514 MK 515
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF W K A D +YN ++ +L + D N+LS+M ++ + PD T +
Sbjct: 611 KALKLFNTWVSKGK--AIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNA 668
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFG 228
++ + +G++ +A + + ++ + G
Sbjct: 669 IITALTDSGRIREAEEFMSKMLEKG 693
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 173/390 (44%), Gaps = 12/390 (3%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV +Y ++ L + D +L M + G P++ T S++++ +AG+ K
Sbjct: 134 PNVV----TYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDK 189
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVIS 275
+L + G + D N +L LC+ + A L M + V+TYN ++
Sbjct: 190 GFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLME 249
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
+ + QV R+++ + G PD + ++ +I GL R R+DDA + M C P
Sbjct: 250 LFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVP 309
Query: 336 DTNAYNAVISNYISVGDFDE------CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
D Y+ +I D + + M C PN TY +I GL ++RK
Sbjct: 310 DVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQ 369
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
AL + M+D +VP + + + LC AA ++ + CK + AY L+
Sbjct: 370 QALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALI 429
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
LS G+ + ++ M ES P Y V+ GLC +G++E AV ++E + K
Sbjct: 430 DGLSKGGEVDKAVRVFELMVESFRPGVA-TYNSVLDGLCGVGRIEEAVRMVEGMIHKECF 488
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P Y L L + +E AY LF+ ++
Sbjct: 489 PDGASYGALIRGLCRVSCVEEAYELFQAVE 518
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 172/387 (44%), Gaps = 49/387 (12%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV YN ++ L + + D ++ M + G P + T + +M+ F R+ QV +A +++
Sbjct: 205 DVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLI 264
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG---- 276
+ + G D + N V+ LC+ + A +L M + + +V+TY+ +I G
Sbjct: 265 QVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKD 324
Query: 277 WS-----KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
W KL E+ ++K+ G P++ T++ +IEGL RA + A+ + M +
Sbjct: 325 WRVDADWKLEAACEILEMMKQT---GCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDS 381
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
PD ++++ VI + D D K + MS C+PN Y LI GL K +V A
Sbjct: 382 EVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA 441
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+ VFE M++ P T S L+ LC G A+ M +
Sbjct: 442 VRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVE-------------------- 480
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
GM+ + +P DG Y +I GLC + +E A + + KGF
Sbjct: 481 -------GMI-------HKECFP-DGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAME 525
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
VY+ L N+L +L A+ + K+
Sbjct: 526 VGVYNVLVNELCKKKRLSDAHGVANKL 552
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 128/257 (49%), Gaps = 7/257 (2%)
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
GQ V++ R E P+ T+ LI GL +AG++D A E+ D M+++G P +
Sbjct: 15 GQAVQLFR------EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVH 68
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM-L 399
N VI G F + + Y+K ++ C P++ T+ L+ L+KS +V +A ++FE M
Sbjct: 69 NGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHT 128
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
+P+ T T+ + LC G A+ + + GC ++ Y +L+ L G+
Sbjct: 129 SSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTD 188
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
L EM G+ D +Y ++ GLC +L+ A+ +++ +R G P+ + Y+ L
Sbjct: 189 KGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLM 248
Query: 520 NKLLASNKLESAYNLFR 536
S +++ A+ L +
Sbjct: 249 ELFCRSKQVDRAFRLIQ 265
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 168/357 (47%), Gaps = 43/357 (12%)
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+E P+ T ++ +AG++ +A ++L + D G+ N V+ LC+ G
Sbjct: 23 EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFG 82
Query: 251 AASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEI-VAEGFSPDSLTFSFL 308
A F ++ G K +++T+NI++ K G+V E ++ + + + P+ +T++ +
Sbjct: 83 DALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTV 142
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I GL + G++D AIE+ D M E GC P+ Y+ ++ G D+ + M+
Sbjct: 143 INGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGF 202
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
+P++ Y L++GL KSR++ +ALE+ + M+ G P+ T S +E C
Sbjct: 203 QPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFC---------- 252
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++++V A++L+ M E G P D Y VIAGLC
Sbjct: 253 ---RSKQVD-----RAFRLI-----------------QVMSERGCPPDVINYNTVIAGLC 287
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL------ASNKLESAYNLFRKIK 539
+L++A ++++ + P + YS + + L A KLE+A + +K
Sbjct: 288 RDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMK 344
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 176/373 (47%), Gaps = 8/373 (2%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K +A D+ YN ++ L + K D + L +M + G+ P+ T + +I A +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
A + + + + G+ + ++ C++ V A S + SM + +L + TY +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+++G K +V + E + +E+ +G +PD ++ LI G + G + A +FD M E+G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ YN ++ + G+ ++ + MS PN TY +I G KS +A+A
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+F+EM +G+VP + T+ ++ C A+ ++ +K GC S + L+ +
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWV 776
Query: 453 SGFGKCGMLLDLWHEMQES-----GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
FGK + ++ + + + G P+D Y +I LC G LE A + +
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPND-VTYNIMIDYLCKEGNLEAAKELFHQMQNAN 835
Query: 508 FCPSRLVYSKLSN 520
P+ + Y+ L N
Sbjct: 836 LMPTVITYTSLLN 848
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 158/353 (44%), Gaps = 1/353 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M G+ P + + +++ + R V + ++L ++ + + V+ +C
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 249 VGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ A ++ M NV+ Y +I + + + + RVLKE+ +G +PD ++
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI GL +A R+D+A M E G P+ Y A IS YI +F KY K M
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
PN T LI+ K KV +A + M+D+GI+ T T + L A
Sbjct: 553 VLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++++ R G + +Y +L+ S G ++ EM E G + IY ++ G
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
C G++E A +++E KG P+ + Y + + S L A+ LF ++K+
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 170/377 (45%), Gaps = 12/377 (3%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D K+Y V++ L + D + +M +G+ PD+ + ++++ F + G + KA +
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
+ + GL + N++L C+ + A L + M K L N +TY +I G+ K
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + E R+ E+ +G PDS ++ L++G R ++ AI +F T K KGC T +
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPF 769
Query: 341 NAVISNYISVGDFD---ECM-KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
NA+I+ G + E + + G +PN TY +I L K + A E+F
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFH 829
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+M + ++P+ T TS L G ++ +A G + Y +++ G
Sbjct: 830 QMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889
Query: 457 KCGMLLDLWHEMQESGYPSDG-----EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L L +M DG +++G +G++E A VME +R + P
Sbjct: 890 MTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949
Query: 512 RLVYSKLSNK-LLASNK 527
+L N+ ++SN+
Sbjct: 950 SATVIELINESCISSNQ 966
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 161/373 (43%), Gaps = 15/373 (4%)
Query: 168 VIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDF 227
V++ AL R D +V M + V D++T +++ + RAG V +L + E
Sbjct: 191 VLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEK- 249
Query: 228 GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNV-MTYNIVISGWSKLGQVVEM 286
+F +LNV A L SM K L + TY+++I G K+ ++ +
Sbjct: 250 --EFRTATLNV-----------DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDA 296
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
+ +L E+ + G S D+ T+S LI+GL + D A + M G Y+ I
Sbjct: 297 KSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICV 356
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
G ++ + GM + P Y LI G + + V E+ EM R IV S
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
T + ++ +CS G A + K+ GC+ ++ Y L++ + G + +
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
EM+E G D Y +I GL +++ A + E + G P+ Y + + ++
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 527 KLESAYNLFRKIK 539
+ SA ++++
Sbjct: 537 EFASADKYVKEMR 549
>gi|414869157|tpg|DAA47714.1| TPA: hypothetical protein ZEAMMB73_516901 [Zea mays]
Length = 853
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 136/260 (52%), Gaps = 3/260 (1%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +YN I+ A GR + V +M + G PD T ++D +AG + A+ + G
Sbjct: 395 VVTYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYG 454
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLG 281
R+++ GL D + +V++ CL + + AA LF M + N++TYNI+I+ +K
Sbjct: 455 RMQEVGLSPDTFTYSVMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKAR 514
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ ++ K++ GF PD +T+S ++E LG G +D+A VF M+ + PD Y
Sbjct: 515 NYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR-RDWAPDEPVYG 573
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++ + G+ D+ + +Y+ M +PN+ T L+S LK + DA V + ML R
Sbjct: 574 LLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNMLAR 633
Query: 402 GIVPSTGTITSFLEPLCSYG 421
G+VPS T T L C+ G
Sbjct: 634 GLVPSVQTYTLLLS-CCTVG 652
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 146/330 (44%), Gaps = 11/330 (3%)
Query: 198 LETLSIVMDSFIRAGQVYKAIQ----MLGRLE----DFGLKFDAESLNVVLWCLCQRLHV 249
L+ L +D+F +A QV K + LG + G K D + ++ L Q
Sbjct: 318 LDNLHCKIDAF-QANQVLKLLHDHTVALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQF 376
Query: 250 GAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
G L + M + V+TYN +I + + + E +V +E+ G+ PD +T+ L
Sbjct: 377 GVLKELLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTL 436
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I+ +AG +D A++++ M+E G PDT Y+ +++ G K + M C
Sbjct: 437 IDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSVMVNCLGKGGQLAAAYKLFCEMIENGC 496
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
PN+ TY +I+ K+R + ++++++M G P T + +E L G A
Sbjct: 497 TPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEA 556
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++ + R+ Y LL+ G L + M + G + +++
Sbjct: 557 VFIEMRRDWAP-DEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFL 615
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+ + ++A +V++ L +G PS Y+ L
Sbjct: 616 KMNRFQDAYIVLQNMLARGLVPSVQTYTLL 645
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%)
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
++ G D + Y +I F + MS +C+P + TY R+I ++ +
Sbjct: 352 RQPGFKHDGHTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVVTYNRIIHAYGRANYL 411
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A++VFEEM + G P T + ++ G AM +Y + ++VG Y ++
Sbjct: 412 KEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSVM 471
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L G+ L+ EM E+G + Y +IA EN V + ++ GF
Sbjct: 472 VNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGF 531
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P ++ YS + L L+ A +F +++
Sbjct: 532 RPDKITYSIVMEVLGHCGHLDEAEAVFIEMR 562
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 95/222 (42%), Gaps = 35/222 (15%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D +Y+V+V LG+ + +M + G P+L T +I++ +A +
Sbjct: 461 LSPDTFTYSVMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVV 520
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
++ ++ G + D + ++V+ L H+ A ++F
Sbjct: 521 KLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVF---------------------- 558
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
+EM R ++PD + L++ G+AG +D A+ + M + G P+
Sbjct: 559 -----IEMRR--------DWAPDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVP 605
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
N+++S ++ + F + + M + P++ TYT L+S
Sbjct: 606 TCNSLLSAFLKMNRFQDAYIVLQNMLARGLVPSVQTYTLLLS 647
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 186/394 (47%), Gaps = 10/394 (2%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K VA + YN ++ ++ + D ++ ++M +G+ P+ T SI++DSF + G+
Sbjct: 346 VKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGK 405
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNI 272
+ A+ LG++ + G+K + ++ C+ + AA SLF+ M L NV+ Y
Sbjct: 406 LDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTS 465
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+ISG+ K G++ R+ E+ +G SP++ TF+ LI GL A R+ +A ++F M E
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWN 525
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ YN +I + G+ + M P+ TY LISGL + +V++A
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585
Query: 393 EVFEEMLDR--------GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
E ++ G +P+ T T+ + LC G A ++ ++ +
Sbjct: 586 EFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNT 645
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y L L+ G + L H++ G+ ++ Y +I G C +G+++ A V+ +
Sbjct: 646 YACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMI 704
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P + YS + + L+ A L+ +
Sbjct: 705 DSGISPDCISYSTIIYEYCRRGDLKEAIKLWESM 738
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 181/403 (44%), Gaps = 13/403 (3%)
Query: 122 NVNVDLSLDVVGK--VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFF 179
N + L D++ + V NR L G +V + + +++ + ++ L R + F
Sbjct: 141 NFSTTLGFDLLIQTYVQNRRELDGLVVVRL----MMDCGILPQIRTLSGVLNGLIRIRQF 196
Query: 180 DFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVV 239
++ ++ G+ PD+ + V+ S +A +++GR+E G + NV
Sbjct: 197 RMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVF 256
Query: 240 LWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
+ LC+ V A + N + K L +V TY ++ G K+ + E ++ E++ GF
Sbjct: 257 IRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGF 316
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
P S L++GL + G I A ++ + +K+ G P YNA+I++ G DE
Sbjct: 317 VPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAES 376
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
+ M PN TY+ LI K K+ AL +M + GI + +S + C
Sbjct: 377 LFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHC 436
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPS 475
G AA ++ + G K ++ Y L +SG+ K G L + L+HEM G
Sbjct: 437 KLGKLRAAKSLFDEMIANGLKPNVVIYTSL---ISGYCKEGELHNAFRLYHEMTGKGISP 493
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+ + +I+GLC+ ++ A + E + P+ + Y+ L
Sbjct: 494 NTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVL 536
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 151/352 (42%), Gaps = 1/352 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V+ M G+ P + TLS V++ IR Q A+ + + GL+ D V+ LC
Sbjct: 167 VVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLC 226
Query: 245 QRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ A + M+ +V TYN+ I G K +V E + + +G D
Sbjct: 227 ELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVG 286
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T+ L+ GL + + E+ + M E G P A + ++ G+ +
Sbjct: 287 TYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKV 346
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ P++ Y LI+ + K K+ +A +F M +G+ P+ T + ++ C G
Sbjct: 347 KKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKL 406
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+ K +VG K ++ Y L+ GK L+ EM +G + IY +
Sbjct: 407 DVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSL 466
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
I+G C G+L NA + E KG P+ ++ L + L +N++ A LF
Sbjct: 467 ISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLF 518
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 43/277 (15%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ +M + V P+ T +++++ + G +A ++L + + GL D + ++ LC
Sbjct: 517 LFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLC 576
Query: 245 QRLHVGAASSLFNSMKGK---------VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
V A N ++G+ L NV+TY +I+G K+G + + E + +E++A
Sbjct: 577 STGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLA 636
Query: 296 ----------------------------------EGFSPDSLTFSFLIEGLGRAGRIDDA 321
EGF +++T++ LI G + GRI +A
Sbjct: 637 SNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEA 696
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
EV M + G PD +Y+ +I Y GD E +K ++ M + P+ Y LI G
Sbjct: 697 AEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYG 756
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
+ ++ A E+ ++M+ RG+ P+ T S + C
Sbjct: 757 CCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 793
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%)
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
EG P++ T + +++ + G + KA + + + + L L ++
Sbjct: 602 EGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEK 661
Query: 252 ASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
A L + + L N +TYNI+I G+ KLG++ E VL ++ G SPD +++S +I
Sbjct: 662 AIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYE 721
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
R G + +AI+++++M +G PDT AYN +I G+ + + M +PN
Sbjct: 722 YCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPN 781
Query: 372 MDTYTRLISGLLKSRKVADALEVF 395
TY LI G V+ + F
Sbjct: 782 RATYNSLIHGTCLMSSVSSTADYF 805
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 128/289 (44%)
Query: 250 GAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
G S +S + + ++++I + + + ++ V++ ++ G P T S ++
Sbjct: 128 GLFESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVL 187
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
GL R + A+ +FD + G PD Y AV+ + + DF + M S C+
Sbjct: 188 NGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCD 247
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
++ TY I GL K+++V +A+E+ + +G+ GT + + LC A M
Sbjct: 248 LSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEM 307
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ + G S A L+ L G G DL +++++ G +Y +I +C
Sbjct: 308 MNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCK 367
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G+L+ A + KG P+ + YS L + KL+ A + K+
Sbjct: 368 DGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKM 416
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 81/170 (47%)
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P + T + +++GL++ R+ AL +F+E++ G+ P T+ + LC A +
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ GC LS+ Y + +R L + +++ + + G +D Y ++ GLC
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + E +M E + GF PS S L + L + SA++L K+K
Sbjct: 298 VEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVK 347
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 176/377 (46%), Gaps = 2/377 (0%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A ++N ++ AL R VL M G PD+ T +I++ + + +A++
Sbjct: 160 ASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALE 219
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
++ + G + + + NV++ +C+ V A L NS+ + N + YN V+ G+
Sbjct: 220 LIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFC 279
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
+ + V+ + +L E+V E P+ T + +I L R G + + M + GC +
Sbjct: 280 SIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVV 339
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
YNAVIS G+ D ++ M S+ C+P++ TY ++ GL + + DA E+ +M
Sbjct: 340 TYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKM 399
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+P T + + C G A ++K+ + GC + T Y ++ L+ GK
Sbjct: 400 SQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKM 459
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
L+L +EM G+ +D ++Y + L ++E V V+ + G P ++Y+ +
Sbjct: 460 EQALELLNEMANKGFNTD-KMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTV 518
Query: 519 SNKLLASNKLESAYNLF 535
L + K + A ++
Sbjct: 519 LLGLCRNGKTDYAIDVL 535
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 181/405 (44%), Gaps = 10/405 (2%)
Query: 135 VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
+++RG+L +A + + + P DV N +V+ L RR V+ E
Sbjct: 74 LIHRGDL--DAALRLVGSSPRPP----DVPLANRLVRDLCRRGRPADAARVVEACGPEAT 127
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
T ++D + RAG + A +++G + A + N ++ LC+R V A
Sbjct: 128 ---AATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALV 184
Query: 255 LFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
+ + M + +V+TYNI++ K + ++ + AEG P+++T++ +I+ +
Sbjct: 185 VLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMC 244
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
R G +D A E+ +++ +GC P+T YN V+ + S+ + + + M NC PN
Sbjct: 245 REGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEA 304
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
T +I+ L + + E+M G + T + + +C G +A+ +
Sbjct: 305 TLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNM 364
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
+ GCK + Y +L+ L + +L +M ++ D + +I+ C G +
Sbjct: 365 QSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLI 424
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
A V ++ KG P+ YS + L + K+E A L ++
Sbjct: 425 LQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEM 469
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 118/282 (41%), Gaps = 35/282 (12%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N + + NVI+ L R+ + L M+K G ++ T + V+ G V A
Sbjct: 298 NCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSA 357
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG 276
+++L ++ FG K D + N VL LC A L M + L + T+N +IS
Sbjct: 358 LELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISF 417
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG---- 332
W + G +++ V K++ +G +P+S T+S +I GL +AG+++ A+E+ + M KG
Sbjct: 418 WCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTD 477
Query: 333 ------------------------------CGPDTNAYNAVISNYISVGDFDECMKYYKG 362
P T YN V+ G D +
Sbjct: 478 KMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLAD 537
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
M S C P+ TY LI GL +A E+ + R ++
Sbjct: 538 MVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDVL 579
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 110/274 (40%), Gaps = 3/274 (1%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V N ++ + G+ + RV++ A G + T+ L++G RAG ++DA V
Sbjct: 95 DVPLANRLVRDLCRRGRPADAARVVE---ACGPEATAATYGALVDGYCRAGLLEDARRVV 151
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
M A+N +I G + + GM C P++ TY L+ K
Sbjct: 152 GGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKG 211
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
R ALE+ + M G P+ T ++ +C G A + GCK + Y
Sbjct: 212 RGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNY 271
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+L+ + ++ EM P + +I LC G L+ L +E+ +
Sbjct: 272 NTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSK 331
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G + + Y+ + + + ++SA L ++
Sbjct: 332 HGCTANVVTYNAVISGMCEQGNVDSALELLSNMQ 365
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 173/390 (44%), Gaps = 12/390 (3%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV +Y ++ L + D +L M + G P++ T S++++ +AG+ K
Sbjct: 134 PNVV----TYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDK 189
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVIS 275
+L + G + D N +L LC+ + A L M + V+TYN ++
Sbjct: 190 GFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLME 249
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
+ + QV R+++ + G PD + ++ +I GL R R+DDA + M C P
Sbjct: 250 LFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVP 309
Query: 336 DTNAYNAVISNYISVGDFDE------CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
D Y+ +I D + + M C PN TY +I GL ++RK
Sbjct: 310 DVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQ 369
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
AL + M+D +VP + + + LC AA ++ + CK + AY L+
Sbjct: 370 QALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALI 429
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
LS G+ + ++ M ES P Y V+ GLC +G++E AV ++E + K
Sbjct: 430 DGLSKGGEVDKAVRVFELMVESFRPGVA-TYNSVLDGLCGVGRIEEAVRMVEGMIHKECF 488
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P Y L L + +E AY LF+ ++
Sbjct: 489 PDGASYGALIRGLCRVSCVEEAYELFQAVE 518
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 172/387 (44%), Gaps = 49/387 (12%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV YN ++ L + + D ++ M + G P + T + +M+ F R+ QV +A +++
Sbjct: 205 DVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLI 264
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG---- 276
+ + G D + N V+ LC+ + A +L M + + +V+TY+ +I G
Sbjct: 265 QVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKD 324
Query: 277 WS-----KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
W KL E+ ++K+ G P++ T++ +IEGL RA + A+ + M +
Sbjct: 325 WRVDADWKLEAACEILEMMKQT---GCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDS 381
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
PD ++++ VI + D D K + MS C+PN Y LI GL K +V A
Sbjct: 382 EVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA 441
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+ VFE M++ P T S L+ LC G A+ M +
Sbjct: 442 VRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVE-------------------- 480
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
GM+ + +P DG Y +I GLC + +E A + + KGF
Sbjct: 481 -------GMI-------HKECFP-DGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAME 525
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
VY+ L N+L +L A+ + K+
Sbjct: 526 VGVYNVLVNELCKKKRLSDAHGVANKL 552
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 128/257 (49%), Gaps = 7/257 (2%)
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
GQ V++ R E P+ T+ LI GL +AG++D A E+ D M+++G P +
Sbjct: 15 GQAVQLFR------EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVH 68
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM-L 399
N VI G F + + Y+K ++ C P++ T+ L+ L+KS +V +A ++FE M
Sbjct: 69 NGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHT 128
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
+P+ T T+ + LC G A+ + + GC ++ Y +L+ L G+
Sbjct: 129 SSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTD 188
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
L EM G+ D +Y ++ GLC +L+ A+ +++ +R G P+ + Y+ L
Sbjct: 189 KGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLM 248
Query: 520 NKLLASNKLESAYNLFR 536
S +++ A+ L +
Sbjct: 249 ELFCRSKQVDRAFRLIQ 265
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 168/357 (47%), Gaps = 43/357 (12%)
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+E P+ T ++ +AG++ +A ++L + D G+ N V+ LC+ G
Sbjct: 23 EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFG 82
Query: 251 AASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEI-VAEGFSPDSLTFSFL 308
A F ++ G K +++T+NI++ K G+V E ++ + + + P+ +T++ +
Sbjct: 83 DALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTV 142
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I GL + G++D AIE+ D M E GC P+ Y+ ++ G D+ + M+
Sbjct: 143 INGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGF 202
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
+P++ Y L++GL KSR++ +ALE+ + M+ G P+ T S +E C
Sbjct: 203 QPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFC---------- 252
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++++V A++L+ M E G P D Y VIAGLC
Sbjct: 253 ---RSKQVD-----RAFRLI-----------------QVMSERGCPPDVINYNTVIAGLC 287
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL------ASNKLESAYNLFRKIK 539
+L++A ++++ + P + YS + + L A KLE+A + +K
Sbjct: 288 RDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMK 344
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 174/365 (47%), Gaps = 14/365 (3%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI-QM 220
DV SY ++ A + NV M ++G P L T +++++ F + G + I +
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQR--LHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
+ +++ G+ DA + N ++ C C+R LH AA +F MK ++ +TYN ++ +
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITC-CKRGSLHQEAAQ-VFEEMKAAGFSYDKVTYNALLDVY 324
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K + E +VL E+V GFSP +T++ LI R G +D+A+E+ + M EKG PD
Sbjct: 325 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y ++S + G + M ++ M + C+PN+ T+ I K + +++F+E
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ G+ P T + L G ++K+ ++ G + L +S + +
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL---ISAYSR 501
Query: 458 CG---MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRL 513
CG + ++ M ++G D Y V+A L G E + V+ E + G C P+ L
Sbjct: 502 CGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAE-MEDGRCKPNEL 560
Query: 514 VYSKL 518
Y L
Sbjct: 561 TYCSL 565
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 189/400 (47%), Gaps = 10/400 (2%)
Query: 150 FNWAIKHPNVAK--DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
F+W +K + D +I+ LG+ N+ + + ++G + D+ + + ++ +
Sbjct: 158 FDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISA 217
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR-LHVGAASSLFNSMKGK-VLF 265
F +G+ +A+ + ++E+ G K + NV+L + +SL MK +
Sbjct: 218 FANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAP 277
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+ TYN +I+ + E +V +E+ A GFS D +T++ L++ G++ R +A++V
Sbjct: 278 DAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVL 337
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ M G P YN++IS Y G DE M+ M+ +P++ TYT L+SG ++
Sbjct: 338 NEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERA 397
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
KV A+ +FEEM + G P+ T +F++ + G M ++ + G + +
Sbjct: 398 GKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTW 457
Query: 446 KLLLRRLSGFGKCGM---LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
L L+ FG+ GM + ++ EM+ +G+ + E + +I+ G E A+ V
Sbjct: 458 NTL---LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRR 514
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
L G P Y+ + L E + + +++ R
Sbjct: 515 MLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 130/293 (44%), Gaps = 1/293 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K + +++N ++ A R F+ V M GV PDL T + V+ + R G
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
++ ++L +ED K + + +L +G SL + G + +
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
++ SK + E ER E+ GFSPD T + ++ GR + A V D MKE+G
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P YN+++ + DF + + + + + +P++ +Y +I ++ ++ DA
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDAS 719
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+F EM + GIVP T +F+ + A+ + + K GC+ + Y
Sbjct: 720 RIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTY 772
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 119/276 (43%), Gaps = 36/276 (13%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR-------- 210
V D+ +YN ++ AL R ++ VL++M P+ T ++ ++
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH 579
Query: 211 --AGQVYKAI-------------------------QMLGRLEDFGLKFDAESLNVVLWCL 243
A +VY + + L++ G D +LN ++
Sbjct: 580 SLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIY 639
Query: 244 CQRLHVGAASSLFNSMKGKVLFNVM-TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
+R V A+ + + MK + M TYN ++ S+ + E +L+EI+A+G PD
Sbjct: 640 GRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDI 699
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
++++ +I R R+ DA +F M+ G PD YN I +Y + F+E + +
Sbjct: 700 ISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRY 759
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
M + C PN +TY ++ G K + +A E++
Sbjct: 760 MIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 123/324 (37%), Gaps = 59/324 (18%)
Query: 277 WSKLGQVVEMERVLKEIVAEGFS------------------PDSLTFSFL--IEGLGRAG 316
WS G + ++VL+ ++ F P+S + L ++GLG
Sbjct: 90 WSYHGLSPQGQQVLRSLIEPNFDSGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHK 149
Query: 317 RIDDAIEVFD-TMKEKGCGP--DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+ D A+ FD MK+K D + +IS G + G+ ++
Sbjct: 150 KFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVY 209
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT-----------------ITSFLEP 416
+YT LIS S + +A+ VF++M + G P+ T ITS +E
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 417 L------------------CSYGPPHA-AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ C G H A ++++ + G Y LL +
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+ + +EM +G+ Y +I+ G L+ A+ + + KG P Y+
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 518 LSNKLLASNKLESAYNLFRKIKIA 541
L + + K+ESA ++F +++ A
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNA 413
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 174/340 (51%), Gaps = 3/340 (0%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
+ EAM ++ A+ ++ V++Y+V++ + G+++ D + +L++M GV P+
Sbjct: 190 KSGFDAEAMEVY--KAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPN 247
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ + +I + +A + +A Q+LG++ED G K D + VV+ LC + A +F
Sbjct: 248 VYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFW 307
Query: 258 SMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
MK + +TY ++ G + + +VA+G++ + ++++ +++ L + G
Sbjct: 308 KMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVG 367
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
R+D+A+ VFD MKEKG P+ +YN++IS ++ FD ++ + M++ PN T+
Sbjct: 368 RLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHV 427
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
I+ KS + A++ +E M +GIVP + L L G A ++ + + +
Sbjct: 428 LFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDM 487
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
G Y ++++ S K ++ + +M E+G D
Sbjct: 488 GVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPD 527
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 181/393 (46%), Gaps = 9/393 (2%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
+++ D+ SYN ++ L + + F+ + M K+ + PD TL ++ SF++
Sbjct: 622 YSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQM-KKILAPDYATLCTILPSFVKN 680
Query: 212 GQVYKAIQMLGRLEDFGLKFDA----ESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFN 266
G + +A+ + +++ LK D S + ++ + + V + ++ + +L N
Sbjct: 681 GLMKEALHTV---KEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLN 737
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
+I K + +E ++ + G S + +++ LI GL ID A ++F
Sbjct: 738 DFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFT 797
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
MK GCGPD YN ++ +E ++ M E TY +ISGL+KS+
Sbjct: 798 EMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSK 857
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
++ A++++ ++ G P+ T L+ L G A ++ + + GCK + T Y
Sbjct: 858 RLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYN 917
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
+LL G + ++ +M E G D + Y +I LC G+L + + + L
Sbjct: 918 ILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLEL 977
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G P ++Y+ L + L S ++E A LF ++K
Sbjct: 978 GLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMK 1010
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 186/398 (46%), Gaps = 12/398 (3%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA LF + K V+ SYN +++ L D ++ ++M + G PD T ++
Sbjct: 756 EAHQLFNKF--KGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNL 813
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF-NSMKGK 262
++D+ ++ ++ + +++ + G + + N ++ L + + A L+ N M
Sbjct: 814 ILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEG 873
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
TY ++ G K G++V+ E + E++ G P+ ++ L+ G AG ++
Sbjct: 874 FSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVC 933
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
++F+ M E+G PD +Y +I + G ++ + Y++ + EP++ Y LI GL
Sbjct: 934 QIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGL 993
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
KS ++ +A+ +F EM +GIVP+ T S + L G A MY++ G K ++
Sbjct: 994 GKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNV 1053
Query: 443 TAYKLLLRRLSGFGKCGMLLDLW--HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
Y L+R G+ G + + ++ G + +I+GL + + A +
Sbjct: 1054 FTYNALIR---GYSVSGSTDNAYAAYDCVAVGV----SLKTALISGLVDENLINIAEGLF 1106
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
E R+G P + Y+ + + + S ++E + +I
Sbjct: 1107 AEMKRRGCGPDQFTYNLILDAIGKSMRIEEMLKVQEEI 1144
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 171/377 (45%), Gaps = 11/377 (2%)
Query: 169 IVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
I+ G K +F N+ A G+ + L ++ + + +A Q+ + + G
Sbjct: 713 ILNKAGVEKSIEFAENI----ASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLG 768
Query: 229 LKFDAESLNVVLWCLCQRLHVGAASSLFNSMK----GKVLFNVMTYNIVISGWSKLGQVV 284
+ S N ++ L + A LF MK G F TYN+++ K ++
Sbjct: 769 VSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEF---TYNLILDAMGKSMRIE 825
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
EM RV E+ +G+ +T++ +I GL ++ R++ AI+++ + +G P Y ++
Sbjct: 826 EMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLL 885
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ G + + M Y C+PN Y L++G + + ++FE+M+++GI
Sbjct: 886 DGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGIN 945
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P + T ++ LC+ G + + +++ ++G + L Y LL+ L + + L
Sbjct: 946 PDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCL 1005
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
++EM++ G + Y +I L G+ A + EE L KG+ P+ Y+ L
Sbjct: 1006 FNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSV 1065
Query: 525 SNKLESAYNLFRKIKIA 541
S ++AY + + +
Sbjct: 1066 SGSTDNAYAAYDCVAVG 1082
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 141/307 (45%), Gaps = 1/307 (0%)
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLK 291
ES N +L + VG + +F+ M+ +++ NV T+ V SG G + L
Sbjct: 108 TESCNYMLELMRAHGRVGDMAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALP 167
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
+ G S + T++ LI L ++G +A+EV+ M E G P Y+ ++ ++
Sbjct: 168 VMREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKR 227
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
D D + M + +PN+ +YT I L ++ + +A ++ +M D G P T T
Sbjct: 228 DVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHT 287
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
++ LC G A ++ K + K Y LL + G ++++W+ M
Sbjct: 288 VVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVAD 347
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
GY + Y V+ LC +G+L+ A+ V +E KG P + Y+ L + L ++ + A
Sbjct: 348 GYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRA 407
Query: 532 YNLFRKI 538
LF +
Sbjct: 408 LELFNHM 414
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 160/411 (38%), Gaps = 71/411 (17%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ L + F V M ++G++P + T S++M SF
Sbjct: 180 TYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSF---------------- 223
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
G K D ++ VLW L N M+ + V NV +Y I I + +
Sbjct: 224 ---GKKRDVDT---VLW-------------LLNEMEARGVKPNVYSYTICIRVLGQAARF 264
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT------ 337
E ++L ++ G PD +T + +I+ L AGR+ DA +VF MK PD
Sbjct: 265 DEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITL 324
Query: 338 -----------------NA------------YNAVISNYISVGDFDECMKYYKGMSSYNC 368
NA Y AV+ VG DE + + M
Sbjct: 325 LDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGI 384
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P +Y LISG LK+ ALE+F M G P+ T F+ G A+
Sbjct: 385 SPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQ 444
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
Y+ + G + A +L L+ G+ GM +++E+++ G D Y +I
Sbjct: 445 RYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCS 504
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + A+ + + G P L + L + L K A+ LF ++K
Sbjct: 505 KASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLK 555
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 131/270 (48%), Gaps = 15/270 (5%)
Query: 132 VGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAK 191
GK+V+ NL E + K PN YN+++ + +C + M +
Sbjct: 891 AGKMVDAENLFNE----MLEYGCK-PNCT----IYNILLNGHRIAGNTENVCQIFEKMVE 941
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
+G+NPD+++ ++++D+ AG++ + +L + GL+ D N+++ L + +
Sbjct: 942 QGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEE 1001
Query: 252 ASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A LFN MK K ++ N+ TYN +I K G+ E ++ +E++ +G+ P+ T++ LI
Sbjct: 1002 AVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIR 1061
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
G +G D+A +D + + A+IS + + + M C P
Sbjct: 1062 GYSVSGSTDNAYAAYDCV-----AVGVSLKTALISGLVDENLINIAEGLFAEMKRRGCGP 1116
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ TY ++ + KS ++ + L+V EE+ +
Sbjct: 1117 DQFTYNLILDAIGKSMRIEEMLKVQEEIAE 1146
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 105/243 (43%), Gaps = 6/243 (2%)
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
++++E + GR+ D +VFD M+++ + + V S G M
Sbjct: 112 NYMLELMRAHGRVGDMAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMRE 171
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
N TY LI L+KS A+A+EV++ M++ GI PS T + +
Sbjct: 172 AGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDT 231
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
+ + + G K ++ +Y + +R L + + +M++SG D + VI
Sbjct: 232 VLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQ 291
Query: 486 GLCNIGQLENAVLV---MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
LC+ G+L +A V M+ S +K P R+ Y L +K S +S ++ +
Sbjct: 292 VLCDAGRLSDAKDVFWKMKASDQK---PDRVTYITLLDKCGDSGDSQSVMEIWNAMVADG 348
Query: 543 QND 545
ND
Sbjct: 349 YND 351
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 176/373 (47%), Gaps = 8/373 (2%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K +A D+ YN ++ L + K D + L +M + G+ P+ T + +I A +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
A + + + + G+ + ++ C++ V A S + SM + +L + TY +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+++G K +V + E + +E+ +G +PD ++ LI G + G + A +FD M E+G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ YN ++ + G+ ++ + MS PN TY +I G KS +A+A
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+F+EM +G+VP + T+ ++ C A+ ++ +K GC S + L+ +
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWV 776
Query: 453 SGFGKCGMLLDLWHEMQES-----GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
FGK + ++ + + + G P+D Y +I LC G LE A + +
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPND-VTYNIMIDYLCKEGNLEAAKELFHQMQNAN 835
Query: 508 FCPSRLVYSKLSN 520
P+ + Y+ L N
Sbjct: 836 LMPTVITYTSLLN 848
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 158/353 (44%), Gaps = 1/353 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M G+ P + + +++ + R V + ++L ++ + + V+ +C
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 249 VGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ A ++ M NV+ Y +I + + + + RVLKE+ +G +PD ++
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI GL +A R+D+A M E G P+ Y A IS YI +F KY K M
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
PN T LI+ K KV +A + M+D+GI+ T T + L A
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++++ R G + +Y +L+ S G ++ EM E G + IY ++ G
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
C G++E A +++E KG P+ + Y + + S L A+ LF ++K+
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 170/377 (45%), Gaps = 12/377 (3%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D K+Y V++ L + D + +M +G+ PD+ + ++++ F + G + KA +
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
+ + GL + N++L C+ + A L + M K L N +TY +I G+ K
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + E R+ E+ +G PDS ++ L++G R ++ AI +F T K KGC T +
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPF 769
Query: 341 NAVISNYISVGDFD---ECM-KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
NA+I+ G + E + + G +PN TY +I L K + A E+F
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFH 829
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+M + ++P+ T TS L G ++ +A G + Y +++ G
Sbjct: 830 QMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889
Query: 457 KCGMLLDLWHEMQESGYPSDG-----EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L L +M DG +++G +G++E A VME +R + P
Sbjct: 890 MTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949
Query: 512 RLVYSKLSNK-LLASNK 527
+L N+ ++SN+
Sbjct: 950 SATVIELINESCISSNQ 966
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 161/373 (43%), Gaps = 15/373 (4%)
Query: 168 VIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDF 227
V++ AL R D +V M + V D++T +++ + RAG V +L + E
Sbjct: 191 VLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEK- 249
Query: 228 GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNV-MTYNIVISGWSKLGQVVEM 286
+F +LNV A L SM K L + TY+++I G K+ ++ +
Sbjct: 250 --EFRTATLNV-----------DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDA 296
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
+ +L E+ + G S D+ T+S LI+GL + D A + M G Y+ I
Sbjct: 297 KSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICV 356
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
G ++ + GM + P Y LI G + + V E+ EM R IV S
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
T + ++ +CS G A + K+ GC+ ++ Y L++ + G + +
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
EM+E G D Y +I GL +++ A + E + G P+ Y + + ++
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 527 KLESAYNLFRKIK 539
+ SA ++++
Sbjct: 537 EFASADKYVKEMR 549
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 167/396 (42%), Gaps = 38/396 (9%)
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
+ FF WA K N D +Y ++ L M + +M + LS ++
Sbjct: 108 IQFFKWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVK 167
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVL 264
+A V KA+ + +++ K + + N ++ L Q H L+N M +G L
Sbjct: 168 VLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCL 227
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
PD++T+S LI G+ GR D AI +
Sbjct: 228 -----------------------------------PDTVTYSALIAAFGKLGRDDSAISL 252
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
FD MKE G P Y ++ Y +G ++ + + M C + TYT LI G+ K
Sbjct: 253 FDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGK 312
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+ KV +A +F ML G P I + + L G A+ ++++ + C ++
Sbjct: 313 AGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVT 372
Query: 445 YKLLLRRLSGFGKCGMLLDLWHE-MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
Y +++ L LW+E M+E+G Y +I G C ++E A+L++EE
Sbjct: 373 YNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEM 432
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
KGF P Y L N L + + E+A LF++++
Sbjct: 433 DEKGFAPCPAAYCSLINALGKAKRYEAANELFQELR 468
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 194/417 (46%), Gaps = 11/417 (2%)
Query: 129 LDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSD 188
L + KV+ + + +A+ +F+ IK +YN ++ L + + + + ++
Sbjct: 162 LSEIVKVLGKAKMVNKALSIFYQ--IKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNE 219
Query: 189 MAKEG-VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
M EG PD T S ++ +F + G+ AI + +++ GL A+ +L +
Sbjct: 220 MCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLG 279
Query: 248 HVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
V A L MK K V TY +I G K G+V E + ++ EG PD + +
Sbjct: 280 RVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLIN 339
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN-YISVGDFDECMKYYKGMSS 365
LI LG+AGR+ DAI++F+ M+ C P+ YN VI + S E +Y+ M
Sbjct: 340 NLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKE 399
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
P+ TY+ LI G K+ +V AL + EEM ++G P S + L A
Sbjct: 400 NGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEA 459
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEY 482
A ++++ R+ S Y ++++ L GKCG L +DL++EM++ G D Y
Sbjct: 460 ANELFQELRENCGYSSARVYAVMIKHL---GKCGRLSEAVDLFNEMKKLGCNPDVYAYNA 516
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+++G+ +G + A ++ G P ++ + N + + A +F ++K
Sbjct: 517 LMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMK 573
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 151/333 (45%), Gaps = 37/333 (11%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K A V +Y ++K +G+ + ++ +M KEG PD+ ++ +++ +AG+
Sbjct: 291 MKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGR 350
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ-RLHVGAASSLFNSMK-GKVLFNVMTYN 271
+ AI++ +E + + N V+ L + + A + MK V+ + TY+
Sbjct: 351 LADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYS 410
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA---------------- 315
I+I G+ K +V + +L+E+ +GF+P + LI LG+A
Sbjct: 411 ILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELREN 470
Query: 316 -------------------GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
GR+ +A+++F+ MK+ GC PD AYNA++S + VG DE
Sbjct: 471 CGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEA 530
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
+ M C P+++++ +++G ++ A+E+F M + I P + + L
Sbjct: 531 HSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGC 590
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
L G A + K+ G + L Y +L
Sbjct: 591 LSRAGMFEEAAKLMKEMNSKGFEYDLITYSSIL 623
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 169/407 (41%), Gaps = 37/407 (9%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
+N + D +Y+ ++ A G+ D ++ +M + G++P + + ++ +
Sbjct: 216 LYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIY 275
Query: 209 IRAGQVYKAIQML-------------------------GRLEDF----------GLKFDA 233
+ G+V KA+ ++ G++E+ G K D
Sbjct: 276 FKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDV 335
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISG-WSKLGQVVEMERVLK 291
+N ++ L + + A LF M+ + NV+TYN VI + + E +
Sbjct: 336 VLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYE 395
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
++ G P S T+S LI+G + R++ A+ + + M EKG P AY ++I+
Sbjct: 396 KMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAK 455
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
++ + ++ + + Y +I L K ++++A+++F EM G P
Sbjct: 456 RYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYN 515
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
+ + + G A + + + GC L ++ ++L + G ++++ M+ S
Sbjct: 516 ALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNS 575
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
D Y V+ L G E A +M+E KGF + YS +
Sbjct: 576 KIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSI 622
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 129/271 (47%), Gaps = 6/271 (2%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKE-GVNPDLETLSIVMDSFIRAGQVY 215
PNV +YN ++KAL K + + KE GV P T SI++D F + +V
Sbjct: 368 PNVV----TYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVE 423
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN-VMTYNIVI 274
KA+ +L +++ G + ++ L + AA+ LF ++ ++ Y ++I
Sbjct: 424 KALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMI 483
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
K G++ E + E+ G +PD ++ L+ G+ R G D+A + TM+E GC
Sbjct: 484 KHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCT 543
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD N++N +++ + G ++ + M + +P++ +Y ++ L ++ +A ++
Sbjct: 544 PDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKL 603
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
+EM +G T +S LE + H
Sbjct: 604 MKEMNSKGFEYDLITYSSILEAVGKIDEDHT 634
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 158/348 (45%), Gaps = 7/348 (2%)
Query: 195 NPDLETLSIVMDSFIRAGQVYK-AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAAS 253
NP + TL + FIR +++K LE LK D + VL + +HV
Sbjct: 55 NPSVRTLD---ERFIRILKIFKWGPDAEKALEVLKLKVDHRLVREVLKIDVE-IHVKIQF 110
Query: 254 SLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
+ + + TY +I + G + EM + ++E+V S +++ LG
Sbjct: 111 FKWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLG 170
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY-NCEPNM 372
+A ++ A+ +F +K + C P +N YN++I + G ++ + Y M + +C P+
Sbjct: 171 KAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDT 230
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
TY+ LI+ K + A+ +F+EM + G+ P+ T+ L G A+ + ++
Sbjct: 231 VTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQE 290
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
++ GC L++ Y L++ + GK ++ M + G D + +I L G+
Sbjct: 291 MKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGR 350
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN-KLESAYNLFRKIK 539
L +A+ + EE P+ + Y+ + L S + A+ + K+K
Sbjct: 351 LADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMK 398
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 176/382 (46%), Gaps = 9/382 (2%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V M GV PD T++I+ ++ R G+V +A++ + +E GL+ + + + V+ C C
Sbjct: 205 VYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYC 264
Query: 245 QRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEG-FSPDS 302
A + S++ K L NV+TY +++ G+ K G++ E ERV+KE+ G D
Sbjct: 265 GMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDE 324
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+ + +I G + GR+DDA V + M++ G + YN +I+ +G +E K +
Sbjct: 325 VAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQE 384
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M P+ +Y LI G + + A E+ M+ G+ +T T + L+ CS
Sbjct: 385 MEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHA 444
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A+ ++ K G + + LL L GK L+LW E G + +
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNT 504
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK--- 539
VI GLC IG++ A +++ P L Y L + +L +A +L K++
Sbjct: 505 VINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564
Query: 540 ----IARQNDYARRLWRSKGWH 557
+ N + + +K WH
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWH 586
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 169/353 (47%), Gaps = 2/353 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG-LKFDAESLNVVLWCL 243
+L + ++G++P++ T ++++ + + G++ +A +++ +++ G + D + +++
Sbjct: 275 ILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGY 334
Query: 244 CQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
CQR + A+ + N M+ + N+ YN +I+G KLG++ E+++VL+E+ G PD
Sbjct: 335 CQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDK 394
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+++ LI+G R G + A E+ M G T YN ++ + S+ D+ ++ +
Sbjct: 395 YSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFL 454
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M PN + + L+ GL K+ K AL +++E L RG+ + T + + LC G
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGR 514
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A + + +++ C Y+ L G+ G L ++M+ G+ E++
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNS 574
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
I G Q + E +G P+ + Y L L A NL+
Sbjct: 575 FITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLY 627
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 172/411 (41%), Gaps = 57/411 (13%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN ++ L + + + VL +M G+ PD + + ++D + R G + KA +M +
Sbjct: 362 YNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMV 421
Query: 226 DFGLKFDAESLNVVLWCLCQRLHV--------------GAASS----------LFNSMKG 261
GL + N +L C LH G A + LF + K
Sbjct: 422 RNGLAATTLTYNTLLKGFCS-LHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKT 480
Query: 262 KVLFN-------------VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
+ N V+T+N VI+G K+G++ E E +L + PDSLT+ L
Sbjct: 481 EQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTL 540
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
+G + G++ A + + M+ G P +N+ I+ + + + + MS+
Sbjct: 541 FDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGL 600
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
PN+ TY LI+G K + +A ++ EM++ G+ P+ ++ + G A +
Sbjct: 601 SPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANL 660
Query: 429 MYKKARKV----GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI-YEYV 483
+ +K + GC +S K ++D + G P + + +
Sbjct: 661 VLQKLVNIDMIPGCSISTIE----------IDKISHVVDTIAD----GNPHSANVMWNVI 706
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
I GLC G++ +A + E K F P YS L + AS ++ A++L
Sbjct: 707 IFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSL 757
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 170/407 (41%), Gaps = 27/407 (6%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+A +YN ++K D + M K GV P+ + S ++D +AG+ +A+
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGW 277
+ GL + + N V+ LC+ + A L + MK + + +TY + G+
Sbjct: 485 NLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGY 544
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
KLGQ+ ++ ++ GF+P F+ I G A + ++ M +G P+
Sbjct: 545 CKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNL 604
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y A+I+ + G+ E Y M + PN+ + L+S K KV +A V ++
Sbjct: 605 VTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQK 664
Query: 398 MLDRGIVPSTGTIT------SFLEPLCSYGPPHAAMMMYK-------KARKVGCKLSLT- 443
+++ ++P T S + + G PH+A +M+ K+ ++ SL
Sbjct: 665 LVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFE 724
Query: 444 ------------AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
Y L+ + G L M +G + Y +I GLC G
Sbjct: 725 SLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSG 784
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+L AV + + KG P+ + Y+ L ++ K A+ L +K+
Sbjct: 785 KLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKM 831
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 115/245 (46%), Gaps = 10/245 (4%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ ++ +Y ++ + CN+ +M G+NP++ S +M F + G+V +A
Sbjct: 600 LSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEAN 659
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGW 277
+L +L + ++++ C + + S + +++ G + +N++I G
Sbjct: 660 LVLQKLVN---------IDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGL 710
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G++ + + + + + + F PD+ T+S LI G +G ID+A + D M G P+
Sbjct: 711 CKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNI 770
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN++I G + + + S PN TY LI K K +A ++ ++
Sbjct: 771 ITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQK 830
Query: 398 MLDRG 402
M++ G
Sbjct: 831 MVEEG 835
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 142/288 (49%), Gaps = 16/288 (5%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++H A V+ +N + K + + ++ S+M+ G++P+L T ++ + + G
Sbjct: 560 MEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGN 619
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
+++A + + + G+ + + ++ C + V A+ + L N+ +
Sbjct: 620 LHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQK-----LVNI----DM 670
Query: 274 ISGWSKLGQVVEMERV--LKEIVAEGFSPDS--LTFSFLIEGLGRAGRIDDAIEVFDTMK 329
I G S +E++++ + + +A+G +P S + ++ +I GL ++GRI DA +F++++
Sbjct: 671 IPGCSI--STIEIDKISHVVDTIADG-NPHSANVMWNVIIFGLCKSGRIADAKSLFESLR 727
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
K PD Y+++I + G DE M S PN+ TY LI GL KS K++
Sbjct: 728 NKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLS 787
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
A+ +F ++ +GI P+ T + ++ C G A + +K + G
Sbjct: 788 RAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG 835
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 108/247 (43%), Gaps = 1/247 (0%)
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
V F+ +++F L+ AG++ A+ VFD M + GC P + N +++ + GD
Sbjct: 140 VYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDP 199
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
Y M P+ T + + +VA A+E EEM G+ + +
Sbjct: 200 GMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAV 259
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
++ C G A + + ++ G ++ Y LL++ G+ + EM+E+G
Sbjct: 260 MDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGD 319
Query: 474 PSDGEI-YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
E+ Y +I G C G++++A V E G + VY+ + N L ++E
Sbjct: 320 IVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQ 379
Query: 533 NLFRKIK 539
+ ++++
Sbjct: 380 KVLQEME 386
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 87/204 (42%), Gaps = 1/204 (0%)
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
+++ ++ + G + + GM C P++ + RL++ L++S A V+ +M
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM 209
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
G++P T+ + C G A+ ++ +G +++L AY ++ G G
Sbjct: 210 RIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWT 269
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG-FCPSRLVYSK 517
+ +Q G + Y ++ G C G++E A V++E G + Y
Sbjct: 270 EDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGM 329
Query: 518 LSNKLLASNKLESAYNLFRKIKIA 541
+ N +++ A + +++ A
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDA 353
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 176/382 (46%), Gaps = 9/382 (2%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V M GV PD T++I+ ++ R G+V +A++ + +E GL+ + + + V+ C C
Sbjct: 205 VYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYC 264
Query: 245 QRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEG-FSPDS 302
A + S++ K L NV+TY +++ G+ K G++ E ERV+KE+ G D
Sbjct: 265 GMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDE 324
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+ + +I G + GR+DDA V + M++ G + YN +I+ +G +E K +
Sbjct: 325 VAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQE 384
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M P+ +Y LI G + + A E+ M+ G+ +T T + L+ CS
Sbjct: 385 MEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHA 444
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A+ ++ K G + + LL L GK L+LW E G + +
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNT 504
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK--- 539
VI GLC IG++ A +++ P L Y L + +L +A +L K++
Sbjct: 505 VINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564
Query: 540 ----IARQNDYARRLWRSKGWH 557
+ N + + +K WH
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWH 586
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 169/353 (47%), Gaps = 2/353 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG-LKFDAESLNVVLWCL 243
+L + ++G++P++ T ++++ + + G++ +A +++ +++ G + D + +++
Sbjct: 275 ILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGY 334
Query: 244 CQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
CQR + A+ + N M+ + N+ YN +I+G KLG++ E+++VL+E+ G PD
Sbjct: 335 CQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDK 394
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+++ LI+G R G + A E+ M G T YN ++ + S+ D+ ++ +
Sbjct: 395 YSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFL 454
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M PN + + L+ GL K+ K AL +++E L RG+ + T + + LC G
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGR 514
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A + + +++ C Y+ L G+ G L ++M+ G+ E++
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNS 574
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
I G Q + E +G P+ + Y L L A NL+
Sbjct: 575 FITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLY 627
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 172/411 (41%), Gaps = 57/411 (13%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN ++ L + + + VL +M G+ PD + + ++D + R G + KA +M +
Sbjct: 362 YNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMV 421
Query: 226 DFGLKFDAESLNVVLWCLCQRLHV--------------GAASS----------LFNSMKG 261
GL + N +L C LH G A + LF + K
Sbjct: 422 RNGLAATTLTYNTLLKGFCS-LHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKT 480
Query: 262 KVLFN-------------VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
+ N V+T+N VI+G K+G++ E E +L + PDSLT+ L
Sbjct: 481 EQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTL 540
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
+G + G++ A + + M+ G P +N+ I+ + + + + MS+
Sbjct: 541 FDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGL 600
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
PN+ TY LI+G K + +A ++ EM++ G+ P+ ++ + G A +
Sbjct: 601 SPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANL 660
Query: 429 MYKKARKV----GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI-YEYV 483
+ +K + GC +S K ++D + G P + + +
Sbjct: 661 VLQKLVNIDMIPGCSISTIE----------IDKISHVVDTIAD----GNPHSANVMWNVI 706
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
I GLC G++ +A + E K F P YS L + AS ++ A++L
Sbjct: 707 IFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSL 757
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 170/411 (41%), Gaps = 31/411 (7%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+AK+V ++N ++ L + +L M + PD T + D + + GQ+ A
Sbjct: 495 LAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTAT 554
Query: 219 QMLGRLEDFGLKFDAESLN--VVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVIS 275
++ ++E G E N + + ++ H + + + M + L N++TY +I+
Sbjct: 555 HLMNKMEHLGFAPSVEMFNSFITGHFIAKQWH--KVNDIHSEMSARGLSPNLVTYGALIA 612
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA-------------- 321
GW K G + E + E+V G +P+ S L+ + G++D+A
Sbjct: 613 GWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIP 672
Query: 322 ------IE------VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
IE V DT+ + +N +I G + ++ + +
Sbjct: 673 GCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFL 732
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P+ TY+ LI G S + +A + + ML G+ P+ T S + LC G A+ +
Sbjct: 733 PDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNL 792
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ K + G + Y L+ GK L +M E G Y +I GLC
Sbjct: 793 FNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCT 852
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
G +E A+ ++++ + P+ + Y L + + S +E L+ ++ I
Sbjct: 853 QGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHI 903
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 181/378 (47%), Gaps = 17/378 (4%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++H A V+ +N + K + + ++ S+M+ G++P+L T ++ + + G
Sbjct: 560 MEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGN 619
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
+++A + + + G+ + + ++ C + V A+ + L N+ +
Sbjct: 620 LHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQK-----LVNI----DM 670
Query: 274 ISGWSKLGQVVEMERV--LKEIVAEGFSPDS--LTFSFLIEGLGRAGRIDDAIEVFDTMK 329
I G S +E++++ + + +A+G +P S + ++ +I GL ++GRI DA +F++++
Sbjct: 671 IPGCSI--STIEIDKISHVVDTIADG-NPHSANVMWNVIIFGLCKSGRIADAKSLFESLR 727
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
K PD Y+++I + G DE M S PN+ TY LI GL KS K++
Sbjct: 728 NKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLS 787
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
A+ +F ++ +GI P+ T + ++ C G A + +K + G + ++ Y +L+
Sbjct: 788 RAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILI 847
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
L G + L +M E+ + Y +I G G +E + +E +G
Sbjct: 848 YGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLL 907
Query: 510 PSRLVYS-KLSNKLLASN 526
P+ + + K S+ ++ +N
Sbjct: 908 PTNWIGNWKRSDPVVVNN 925
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 108/247 (43%), Gaps = 1/247 (0%)
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
V F+ +++F L+ AG++ A+ VFD M + GC P + N +++ + GD
Sbjct: 140 VYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDP 199
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
Y M P+ T + + +VA A+E EEM G+ + +
Sbjct: 200 GMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAV 259
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
++ C G A + + ++ G ++ Y LL++ G+ + EM+E+G
Sbjct: 260 MDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGD 319
Query: 474 PSDGEI-YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
E+ Y +I G C G++++A V E G + VY+ + N L ++E
Sbjct: 320 IVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQ 379
Query: 533 NLFRKIK 539
+ ++++
Sbjct: 380 KVLQEME 386
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 87/204 (42%), Gaps = 1/204 (0%)
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
+++ ++ + G + + GM C P++ + RL++ L++S A V+ +M
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM 209
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
G++P T+ + C G A+ ++ +G +++L AY ++ G G
Sbjct: 210 RIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWT 269
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG-FCPSRLVYSK 517
+ +Q G + Y ++ G C G++E A V++E G + Y
Sbjct: 270 EDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGM 329
Query: 518 LSNKLLASNKLESAYNLFRKIKIA 541
+ N +++ A + +++ A
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDA 353
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 184/414 (44%), Gaps = 22/414 (5%)
Query: 108 QKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIK-HPNVAKDVKSY 166
Q+L K V+ N+DL+L + F+ A K H N A + ++Y
Sbjct: 97 QRLSPKRVVSMISRQQNLDLALQI------------------FDHAGKFHRNFAHNYETY 138
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
+++ L + + F+ M ++S + K + V+ ++ AG+ AI+ R+
Sbjct: 139 LAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPS 198
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK--VLFNVMTYNIVISGWSKLGQVV 284
FGL+ S N +L L Q +F + + K ++ NV T NI++ K +
Sbjct: 199 FGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDID 258
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
RVL+E+ A GF P+ +T++ ++ G G + A VF + ++G PD Y ++
Sbjct: 259 AAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILM 318
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
Y G F + +K M EPN TY +I K +K + L + ++ML++ +
Sbjct: 319 DGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYI 378
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
PS+ ++ LC G A ++KK K C L+ L GK L
Sbjct: 379 PSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKL 438
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+ E ++ PS Y +IAG+C G+L A + + + KG P+ Y+ L
Sbjct: 439 FDEFEKGSIPST-LTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNML 491
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 132/298 (44%), Gaps = 37/298 (12%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
L F K + +V + N++VKAL ++ D VL +M G P++ T + ++
Sbjct: 226 LMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGG 285
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFN 266
++ G + A ++ G + D G D + +++ C++ A + + M+ +V N
Sbjct: 286 YVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPN 345
Query: 267 VMTYNIVISGW---SKLGQVVEME----------------RVLKEIVAEG---------- 297
+TY ++I + K G+V+ + RV+ + EG
Sbjct: 346 DVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWK 405
Query: 298 ------FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
+PD+ S LI L + G++ +A ++FD EKG P T YNA+I+ G
Sbjct: 406 KLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEF-EKGSIPSTLTYNALIAGMCEGG 464
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
+ E + + M C PN TY LI G K + + V EEMLD G +P+ T
Sbjct: 465 ELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKAT 522
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 118/276 (42%), Gaps = 6/276 (2%)
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
G+ LF + N +G KL R I + G P +F+ L+ L + R D
Sbjct: 169 GENLFITVIRNYGFAGRPKLAI-----RTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDL 223
Query: 321 AIEVFDTMKEK-GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
+F ++K G P+ N ++ D D ++ + M + PN+ TYT ++
Sbjct: 224 VHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTIL 283
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
G + + A VF E+LDRG VP T T ++ C G A+ + + + +
Sbjct: 284 GGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVE 343
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+ Y +++ K G +L+L +M E Y + VI LC G++E A +
Sbjct: 344 PNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACEL 403
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
++ L+K P + S L + L K+ A LF
Sbjct: 404 WKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLF 439
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 86/176 (48%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y VI++A + K + N+L DM ++ P V+D G+V A ++ +L
Sbjct: 348 TYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKL 407
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVV 284
D + ++ LC+ V A LF+ + + + +TYN +I+G + G++
Sbjct: 408 LKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELP 467
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
E R+ +V +G P++ T++ LI+G + G + I V + M + GC P+ Y
Sbjct: 468 EAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATY 523
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 153/355 (43%), Gaps = 33/355 (9%)
Query: 24 FSFSTSVRS-NLSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNS 82
F SVRS N N L+ N++ ++ H + K F I PNV+ + +
Sbjct: 199 FGLQPSVRSFNTLLNTLVQNKRFDLV----HLMFKNCRKKFGI-----VPNVF--TCNIL 247
Query: 83 VKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLS 142
VK + +D + L+++ G I NV ++G V++G++
Sbjct: 248 VKALCKKNDIDAAIR--------VLEEMPAMGFIP------NVVTYTTILGGYVSKGDMV 293
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
G V I D +Y +++ ++ F V+ +M + V P+ T
Sbjct: 294 GARRVF---GEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYG 350
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--K 260
++++++ + + + + +L + + + V+ LC+ V A L+ + K
Sbjct: 351 VIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKK 410
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
N +T + +I K G+V E ++ E +G P +LT++ LI G+ G + +
Sbjct: 411 NCTPDNAIT-STLIHWLCKEGKVWEARKLFDEF-EKGSIPSTLTYNALIAGMCEGGELPE 468
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
A ++D M EKGC P+ YN +I + VG+ E ++ + M C PN TY
Sbjct: 469 AARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATY 523
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 115/277 (41%), Gaps = 7/277 (2%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N TY +I SK ME ++ ++ F +I G AGR AI F
Sbjct: 134 NYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTF 193
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM-SSYNCEPNMDTYTRLISGLLK 384
+ G P ++N +++ + FD +K + PN+ T L+ L K
Sbjct: 194 LRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCK 253
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+ A+ V EEM G +P+ T T+ L S G A ++ + G T
Sbjct: 254 KNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTT 313
Query: 445 YKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
Y +L + G+ K G +D + EM+E+ + Y +I C + + +++
Sbjct: 314 YTIL---MDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLD 370
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ L K + PS + ++ + L K+E A L++K+
Sbjct: 371 DMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKL 407
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 176/390 (45%), Gaps = 2/390 (0%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
FN AIK + +V ++N+++ F L+ M K +PD T + ++D+
Sbjct: 196 FNDAIKL-GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALC 254
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVM 268
+ G++ A +L ++ GL + + N++++ C+ + A+++ M + +L +V
Sbjct: 255 KKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVW 314
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TYN++I+G G++ E ++ E+ PD ++++ LI G +I +A ++ + M
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
EKG P+ +N ++ Y G D+ M P+ TY LI+G K+ +
Sbjct: 375 SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNM 434
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A +EM + + + T+ + L LC A + ARK G + +Y L
Sbjct: 435 GEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTL 494
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ G L LW EM+E Y +I GLC G+ E A+ + E L G
Sbjct: 495 IVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGL 554
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P Y+ + + +E A+ K+
Sbjct: 555 LPDETTYNTILHGYCREGDVEKAFQFHNKM 584
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 189/429 (44%), Gaps = 37/429 (8%)
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
V F N K+ N + D +YN I+ AL ++ ++L DM G+ P+ T +I++
Sbjct: 228 VEFLNVMGKY-NCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVY 286
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLF 265
+ + G + +A ++ + L D + N+++ LC + A L + M+ K+L
Sbjct: 287 GYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLP 346
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V++YN +I+G + ++ E ++L+E+ +G P+++T + +++ + G++DDA
Sbjct: 347 DVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTI 406
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT----------- 374
M+E G PD YN +I+ Y G+ E + M N + + T
Sbjct: 407 TKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCRE 466
Query: 375 ------------------------YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
Y LI G K V AL++++EM ++ I+PST T
Sbjct: 467 KKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTY 526
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+ LC G A+ + + G T Y +L G ++M E
Sbjct: 527 NCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE 586
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
+ + D ++ GLC G LE A+ + + KG + Y+ L L +L+
Sbjct: 587 NSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDD 646
Query: 531 AYNLFRKIK 539
A+NL +++
Sbjct: 647 AFNLLSEME 655
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 174/382 (45%), Gaps = 1/382 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N+ DV +YN+++ L + + +M + PD+ + + +++ + ++ +A
Sbjct: 308 NLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEA 367
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISG 276
++L + + G+K +A + N+++ C+ + AS+ M+ + +TYN +I+G
Sbjct: 368 FKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLING 427
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K G + E R + E+ + DS+T + ++ L R ++++A ++ + +++G D
Sbjct: 428 YCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFID 487
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+Y +I Y G+ D +K + M P+ TY +I GL + K A+
Sbjct: 488 EVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLN 547
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
E+L+ G++P T + L C G A + K + K + +LLR L G
Sbjct: 548 ELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEG 607
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
L L++ G D Y +I LC G+L++A ++ E K P Y+
Sbjct: 608 MLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYN 667
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
+ L S ++ A K+
Sbjct: 668 AIITALTDSGRIREAEEFMSKM 689
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 155/354 (43%), Gaps = 1/354 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV SYN ++ +L +M+++GV P+ T +I++ + + G++ A +
Sbjct: 347 DVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTI 406
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
++E+ G D + N ++ C+ ++G A + M K + + +T N ++ +
Sbjct: 407 TKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCRE 466
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
++ E ++L G+ D +++ LI G + G +D A++++D MKEK P T Y
Sbjct: 467 KKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTY 526
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I G ++ + + P+ TY ++ G + V A + +M++
Sbjct: 527 NCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE 586
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
P T L LC G A+ ++ G + Y L+ L G+
Sbjct: 587 NSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDD 646
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+L EM+E D Y +I L + G++ A M + L KG P +++
Sbjct: 647 AFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVL 700
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 172/393 (43%), Gaps = 24/393 (6%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V + ++N++VK + D N ++ M + G +PD T + +++ + +AG + +A
Sbjct: 379 VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAF 438
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+ + + +K D+ +LN +L LC+ + A L +S + + F + ++Y +I G+
Sbjct: 439 RTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGY 498
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G V ++ E+ + P ++T++ +I GL + G+ + AI + + E G PD
Sbjct: 499 FKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDE 558
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN ++ Y GD ++ +++ M + +P++ T L+ GL + AL++F
Sbjct: 559 TTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNT 618
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ +G T T + + LC G A + + + Y ++ L+ G+
Sbjct: 619 WVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGR 678
Query: 458 CGMLLDLWHEMQESGYPSDGEI-----------------------YEYVIAGLCNIGQLE 494
+ +M E G + Y I LC G+ +
Sbjct: 679 IREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYK 738
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
+A+ + ES +KG + Y L + L+ K
Sbjct: 739 DAMRIFGESKQKGITVDKSTYINLMDGLIKRRK 771
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 160/362 (44%), Gaps = 10/362 (2%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIR---AGQVYKAIQMLGRLEDFGLKFDAESLNVVLW 241
+ M + + P+L T + +++S +R + V + + G+ + + N+V++
Sbjct: 157 IFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIY 216
Query: 242 CLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
C A N M K + +TYN ++ K G++ + +L ++ + G P
Sbjct: 217 GYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLP 276
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
+ T++ L+ G + G + +A V + M + PD YN +I+ + G +E K
Sbjct: 277 NRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLR 336
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
M + P++ +Y LI+G L+ K+++A ++ EEM ++G+ P+ T ++ C
Sbjct: 337 DEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKE 396
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS---DG 477
G A K + G Y L ++G+ K G + + + M E G + D
Sbjct: 397 GKMDDASNTITKMEESGFSPDCVTYNTL---INGYCKAGNMGEAFRTMDEMGRKNMKMDS 453
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
++ LC +LE A ++ + ++G+ + Y L ++ A L+ +
Sbjct: 454 VTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDE 513
Query: 538 IK 539
+K
Sbjct: 514 MK 515
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF W K A D +YN ++ +L + D N+LS+M ++ + PD T +
Sbjct: 611 KALKLFNTWVSKGK--AIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNA 668
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFG 228
++ + +G++ +A + + ++ + G
Sbjct: 669 IITALTDSGRIREAEEFMSKMLEKG 693
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 164/337 (48%), Gaps = 1/337 (0%)
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
+++ + G+ AI++L +ED + D N ++ LC+ V A + M +
Sbjct: 243 LLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRG 302
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+F +V+TY+ +I G+ GQ++ +L E+ + +PD T++ LI+ L + G++ +A
Sbjct: 303 IFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAK 362
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+ M ++G P+ Y+ ++ Y VG+ + + M P++ +Y +I+GL
Sbjct: 363 NLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGL 422
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K + V +A+ + EML + +VP+T T S ++ LC G +A+ + K+ G +
Sbjct: 423 CKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADV 482
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y LL L + L+ +M+E G + Y +I GLC +L+NA + +
Sbjct: 483 ITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQH 542
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
L KG C Y+ + L L+ A + K++
Sbjct: 543 ILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKME 579
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 179/371 (48%), Gaps = 10/371 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV YN I+ L + K + + ++M G+ PD+ T S ++ F AGQ+ A +L
Sbjct: 271 DVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLL 330
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ + D + +++ LC+ + A +L M K V NV+TY+ ++ G+ +
Sbjct: 331 NEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLV 390
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+V +++ +V +P +++ +I GL + +D+A+ + M K P+T Y
Sbjct: 391 GEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTY 450
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N++I G + K + ++ TYT L+ GL K++ + A+ +F +M +
Sbjct: 451 NSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKE 510
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
RGI P+ T T+ ++ LC A +++ GC + + Y ++ + G K GM
Sbjct: 511 RGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVM---IGGLCKEGM 567
Query: 461 L---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY-- 515
L L + +M+++G D +E +I L + + A ++ E + KG R +
Sbjct: 568 LDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLHFRNFHGE 627
Query: 516 -SKLSNKLLAS 525
S ++NK++ +
Sbjct: 628 RSPVTNKVIVN 638
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 169/406 (41%), Gaps = 36/406 (8%)
Query: 169 IVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
I+ +L + K F ++ M +G+ PDL TLSI+++ F GQ+ + +LG++ G
Sbjct: 138 ILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLG 197
Query: 229 LKFDAESLNVVLWCLC------QRLH----VGAASSLFNSMKGKVLFN------------ 266
+ + L ++ LC + LH V A N + L N
Sbjct: 198 YQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAI 257
Query: 267 --------------VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
V+ YN +I G K V E E+ + G PD +T+S LI G
Sbjct: 258 KLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGF 317
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
AG++ A + + M K PD Y +I G E M+ +PN+
Sbjct: 318 CLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNV 377
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
TY+ L+ G +V +A ++F M+ + PS + + LC AM + ++
Sbjct: 378 VTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLRE 437
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+ Y L+ L G+ LDL E+ G P+D Y ++ GLC
Sbjct: 438 MLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQN 497
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
L+ A+ + + +G P++ Y+ L + L +L++A LF+ I
Sbjct: 498 LDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHI 543
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 129/333 (38%), Gaps = 51/333 (15%)
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG------ 316
++ N++T +I+I+ LGQ+ VL +I+ G+ P+S+T + L++G R
Sbjct: 7 IVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAIKLPRM 66
Query: 317 ---------------------------------------------RIDDAIEVFDTMKEK 331
+ DA+ F+ M
Sbjct: 67 IEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFNGMLLM 126
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
P + ++ + + + F + K M EP++ T + LI+ ++A +
Sbjct: 127 RNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFS 186
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
V ++L G P+T +T+ ++ LC G ++ + K G +++ +Y LL
Sbjct: 187 FSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNG 246
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L G+ + L +++ D +Y +I GLC + A E +G P
Sbjct: 247 LCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPD 306
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
+ YS L + +L A++L ++ + N
Sbjct: 307 VITYSTLICGFCLAGQLMGAFSLLNEMTLKNIN 339
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 170/359 (47%), Gaps = 2/359 (0%)
Query: 181 FMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVL 240
F+ ++L+ + K G P+ T + ++ GQ Y+A+ + G K D S +++
Sbjct: 63 FLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILM 122
Query: 241 WCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
LC+ AA + K V +V+ Y+ +I K V + R+ E++A+G P
Sbjct: 123 NGLCKMGETRAAMQMLR--KTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFP 180
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
+ TFS L++ L + + A+ + M +KG P+ Y A++ Y V ++ + +
Sbjct: 181 NVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIF 240
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
M EPN+ Y +I+GL K ++V +A+ +F+EM + I P T ++ LC
Sbjct: 241 NVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKL 300
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
G ++ + + R +G + + Y LL L + L E+++ G + Y
Sbjct: 301 GKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTY 360
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I GLC G+LE+A ++ +E L +G+ + Y+ + N L + A L +++
Sbjct: 361 TTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRME 419
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 149/334 (44%), Gaps = 34/334 (10%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V DV Y+ I+ +L + KF + S+M +G+ P++ T SI++D+ + + +A+
Sbjct: 143 VNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAM 202
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
+L + MK V NV+TY ++ G+
Sbjct: 203 NLLAMM----------------------------------MKKGVKPNVVTYGAIMDGYC 228
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
+ QV + + +V EG P+ ++ +I GL + R+D+A+ +F M K PD
Sbjct: 229 LVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVV 288
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
YN +I +G ++ M S ++ TY L+ L K+ + A+ + +E+
Sbjct: 289 TYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEI 348
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
D+GI P+ T T+ ++ LC G A +++++ G +++ Y +++ L G
Sbjct: 349 KDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLF 408
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
L L M+++ D YE +I L G+
Sbjct: 409 DEALALLSRMEDNACIPDAVSYETIIYALSEKGE 442
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 149/328 (45%), Gaps = 4/328 (1%)
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
G D + +I+M+ + G+ A+QML + + D + ++ LC+ V
Sbjct: 109 HGFKLDQVSYAILMNGLCKMGETRAAMQMLRKT---WVNADVVMYSTIIDSLCKGKFVTD 165
Query: 252 ASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A L++ M K +F NV T++I++ K + + +L ++ +G P+ +T+ +++
Sbjct: 166 AYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMD 225
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
G +++ A+ +F+ M ++G P+ YN +I+ DE M +K M P
Sbjct: 226 GYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINP 285
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
++ TY LI GL K K++ +LE+ +EM G T S L LC A+ +
Sbjct: 286 DVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLV 345
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
K+ + G + ++ Y L+ L G+ ++ E+ GY Y +I GLC
Sbjct: 346 KEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKK 405
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKL 518
G + A+ ++ P + Y +
Sbjct: 406 GLFDEALALLSRMEDNACIPDAVSYETI 433
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 155/381 (40%), Gaps = 41/381 (10%)
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
P + + ++ S ++ AI + +LE G+K +L +++ C C H G +
Sbjct: 7 TPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYC---HTGGITF 63
Query: 255 LFNSMKGKVL-----FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
LF S+ K+L N +T+ +I G GQ E +VA GF D ++++ L+
Sbjct: 64 LF-SILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILM 122
Query: 310 EGLGRAGR--------------------------------IDDAIEVFDTMKEKGCGPDT 337
GL + G + DA ++ M KG P+
Sbjct: 123 NGLCKMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNV 182
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
++ ++ + M M +PN+ TY ++ G +V AL +F
Sbjct: 183 YTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNV 242
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ G+ P+ + LC AM ++K+ + Y +L+ L GK
Sbjct: 243 MVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGK 302
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L+L EM+ G D Y ++ LC L+ A+ +++E +G P+ Y+
Sbjct: 303 ISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTT 362
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L + L +LE AY +F++I
Sbjct: 363 LIDGLCKDGRLEDAYVIFQEI 383
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 130/278 (46%), Gaps = 36/278 (12%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V +++++V AL + + N+L+ M K+GV P++ T +MD + QV KA+ +
Sbjct: 181 NVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIF 240
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
+ G++ + N+++ LC++ V A +LF M K+ +V+TYNI+I G KL
Sbjct: 241 NVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKL 300
Query: 281 GQ-------VVEMERV----------------------------LKEIVAEGFSPDSLTF 305
G+ V EM + +KEI +G P+ T+
Sbjct: 301 GKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTY 360
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LI+GL + GR++DA +F + +G YN +I+ G FDE + M
Sbjct: 361 TTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMED 420
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
C P+ +Y +I L + + ++ M+ RG+
Sbjct: 421 NACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGL 458
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 145/306 (47%), Gaps = 4/306 (1%)
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
N +L L + H A SLF ++ + +++T I+++ + G + + +L +I
Sbjct: 12 QFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKI 71
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+ G+ P+S+TF+ LI+G+ G+ +A+ D + G D +Y +++ +G+
Sbjct: 72 LKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGET 131
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
M+ + + N + M Y+ +I L K + V DA ++ EM+ +GI P+ T +
Sbjct: 132 RAAMQMLRK-TWVNADVVM--YSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSIL 188
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
++ LC AM + K G K ++ Y ++ + L++++ M + G
Sbjct: 189 VDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGV 248
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
+ Y +I GLC +++ A+ + +E K P + Y+ L + L K+ ++
Sbjct: 249 EPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLE 308
Query: 534 LFRKIK 539
L +++
Sbjct: 309 LVDEMR 314
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 178/372 (47%), Gaps = 35/372 (9%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
I+ ++ DV +Y ++ A + +L +MA++G P+ T ++++ S RAG+
Sbjct: 377 IRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGR 436
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ--RLHV-------------GAASSLFNS 258
+A ++L R+ + G D N+++ LC+ RL V GA L NS
Sbjct: 437 TTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNS 496
Query: 259 ---------MKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
+ + L + +TY+I+IS K G+ E ++ L E++ + SPDS+ + I
Sbjct: 497 FLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFI 556
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
G + G+ AI+V M++KGC P T YN +I + +E MK M
Sbjct: 557 HGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGIS 616
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
PN+ TY LI + V A+ + +EML +VP+ + ++ C +A M+
Sbjct: 617 PNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMV 676
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGK---CGMLLDLWHEMQES--GYPSDGEIYEYVI 484
+ A + C Y L+ L+ +GK +L++ EM+ S +P Y+ +I
Sbjct: 677 FDAALRT-CGQKEVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFP-----YKQII 730
Query: 485 AGLCNIGQLENA 496
+GLC +G++++A
Sbjct: 731 SGLCEVGEVDHA 742
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 167/352 (47%), Gaps = 13/352 (3%)
Query: 161 KDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
+ V+SYN + L R +L +MA EG+ P+ T +I++ + G+ + A ++
Sbjct: 314 RRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRV 373
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSK 279
+ + D + +L C + ++ AA+ + + M K N TYN+++ +
Sbjct: 374 ENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWR 433
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G+ E ER+L+ + +G+S D+ + +I+GL R R+D A+++ D M E+G G A
Sbjct: 434 AGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSG----A 489
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
+ ++++SV S C P+ TY+ LIS L K + +A + EM+
Sbjct: 490 LGRLGNSFLSV--------VSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMI 541
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
+ I P + +F+ C +G A+ + + K GC S Y LL+R K
Sbjct: 542 VKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSE 601
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
++ L EM+E G + Y +I C G + A+ +++E L+ P+
Sbjct: 602 EIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPN 653
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 179/429 (41%), Gaps = 71/429 (16%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN ++ A R D + + D+ G PD+ T ++++ + AG+ +++ R+
Sbjct: 113 YNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGR----MELAQRVF 168
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE 285
D + S ++ C+ G + + G N++ N V++G+ K G V E
Sbjct: 169 DAMPARNEFSFGILARGYCR---AGRSIDALKVLDGMPSMNLVVCNTVVAGFCKEGLVEE 225
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE---KGCG-PDTNAYN 341
ER+++ + +G +P+ +TF+ I L +AGR+ DA +F M+E G PD ++
Sbjct: 226 AERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFD 285
Query: 342 AVISNYISVGDFDE---------CMKYYKGMSSYN------------------------- 367
++S + G DE C + + + SYN
Sbjct: 286 VMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHE 345
Query: 368 -CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV-PSTGTITSFLEPLCSYGPPHA 425
+PN TY ++SGL K K DA V E + G++ P T TS L CS G A
Sbjct: 346 GIQPNSYTYNIIVSGLCKEGKAFDARRV-ENFIRSGVMSPDVVTYTSLLHAYCSKGNIAA 404
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A + + + GC + Y +LL+ L G+ L M E GY D +I
Sbjct: 405 ANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIID 464
Query: 486 GLCN---------------------IGQLENAVL--VMEESLRKGFCPSRLVYSKLSNKL 522
GLC +G+L N+ L V + S+ + P ++ YS L + L
Sbjct: 465 GLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISAL 524
Query: 523 LASNKLESA 531
+ + A
Sbjct: 525 CKEGRFDEA 533
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 169/401 (42%), Gaps = 28/401 (6%)
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
N +V + + ++ M +G+ P++ T + + + +AG+V A ++ +++
Sbjct: 211 NTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQE 270
Query: 227 ---FGL-KFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLG 281
GL + D + +V+L C V A L + M+ G L V +YN +SG + G
Sbjct: 271 DWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNG 330
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+V E + +L+E+ EG P+S T++ ++ GL + G+ DA V + ++ PD Y
Sbjct: 331 RVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYT 390
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+++ Y S G+ + M+ C PN TY L+ L ++ + +A + E M ++
Sbjct: 391 SLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEK 450
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAM-----MMYKKARKVG------------------C 438
G T ++ LC AM M + + +G C
Sbjct: 451 GYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRC 510
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
Y +L+ L G+ EM D IY+ I G C G+ A+
Sbjct: 511 LPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIK 570
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
V+ + +KG PS Y+ L +K E L ++K
Sbjct: 571 VLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMK 611
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 89/193 (46%), Gaps = 35/193 (18%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
++YN++++ + + + ++S+M ++G++P++ T + ++ SF + G V KA+ +L
Sbjct: 584 TRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLD 643
Query: 223 ----------------------RLEDFG---LKFDAE----SLNVVLWCL-CQRLH---- 248
++ DF + FDA VL+CL C L
Sbjct: 644 EMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQKEVLYCLMCTELTTYGK 703
Query: 249 -VGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ A + L +++ +V Y +ISG ++G+V +LK ++A+ D F
Sbjct: 704 WIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLIAKRHLFDPAAFMP 763
Query: 308 LIEGLGRAGRIDD 320
+I+ LG G+ D
Sbjct: 764 VIDALGDRGKKQD 776
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/205 (17%), Positives = 87/205 (42%), Gaps = 2/205 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+++ D Y+ + + VL DM K+G NP T ++++ F + +
Sbjct: 544 DISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEI 603
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG 276
++++ +++ G+ + + N ++ CQ+ V A L + M + +++ N+ +++++I
Sbjct: 604 MKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKA 663
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K+ + V + + L + + L G+ +A + + E
Sbjct: 664 YCKITDFPSAQMVFDAALRTCGQKEVL-YCLMCTELTTYGKWIEAKNILEMALEMRVSIQ 722
Query: 337 TNAYNAVISNYISVGDFDECMKYYK 361
+ Y +IS VG+ D K
Sbjct: 723 SFPYKQIISGLCEVGEVDHAHSLLK 747
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 105/246 (42%), Gaps = 18/246 (7%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P + ++ LI R R+D ++ + G PD N ++ G + +
Sbjct: 108 PTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRV 167
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ M + N ++ L G ++ + DAL+V + M +V + F C
Sbjct: 168 FDAMPAR----NEFSFGILARGYCRAGRSIDALKVLDGMPSMNLVVCNTVVAGF----CK 219
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQES---GY 473
G A + ++ R G ++ + R+S K G +LD ++ +MQE G
Sbjct: 220 EGLVEEAERLVERMRVQGLAPNVVTFNA---RISALCKAGRVLDAYRIFQDMQEDWQHGL 276
Query: 474 PSDGEI-YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
P ++ ++ +++G C+ G ++ A ++++ GF Y++ + L+ + ++ A
Sbjct: 277 PRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQ 336
Query: 533 NLFRKI 538
L R++
Sbjct: 337 ELLREM 342
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 81/190 (42%), Gaps = 14/190 (7%)
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P Y RLI L+ ++ +++++L G P T L+ LC G M +
Sbjct: 108 PTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAG----RMEL 163
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS-DGEIYEYVIAGLC 488
++ + ++ +L R G+ + G +D + G PS + + V+AG C
Sbjct: 164 AQRVFDAMPARNEFSFGILAR---GYCRAGRSIDALKVLD--GMPSMNLVVCNTVVAGFC 218
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYAR 548
G +E A ++E +G P+ + ++ + L + ++ AY +F+ + Q D+
Sbjct: 219 KEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDM----QEDWQH 274
Query: 549 RLWRSKGWHF 558
L R F
Sbjct: 275 GLPRPDQVTF 284
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 176/373 (47%), Gaps = 8/373 (2%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K +A D+ YN ++ L + K D + L +M + G+ P+ T + +I A +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
A + + + + G+ + ++ C++ V A S + SM + +L + TY +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+++G K +V + E + +E+ +G +PD ++ LI G + G + A +FD M E+G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ YN ++ + G+ ++ + MS PN TY +I G KS +A+A
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+F+EM +G+VP + T+ ++ C A+ ++ +K GC S + L+ +
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWV 776
Query: 453 SGFGKCGMLLDLWHEMQES-----GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
FGK + ++ + + + G P+D Y +I LC G LE A + +
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPND-VTYNIMIDYLCKEGNLEAAKELFHQMQNAN 835
Query: 508 FCPSRLVYSKLSN 520
P+ + Y+ L N
Sbjct: 836 LMPTVITYTSLLN 848
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 158/353 (44%), Gaps = 1/353 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M G+ P + + +++ + R V + ++L ++ + + V+ +C
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 249 VGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ A ++ M NV+ Y +I + + + + RVLKE+ +G +PD ++
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI GL +A R+D+A M E G P+ Y A IS YI +F KY K M
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
PN T LI+ K KV +A + M+D+GI+ T T + L A
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++++ R G + +Y +L+ S G ++ EM E G + IY ++ G
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
C G++E A +++E KG P+ + Y + + S L A+ LF ++K+
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 170/377 (45%), Gaps = 12/377 (3%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D K+Y V++ L + D + +M +G+ PD+ + ++++ F + G + KA +
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
+ + GL + N++L C+ + A L + M K L N +TY +I G+ K
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + E R+ E+ +G PDS ++ L++G R ++ AI +F T K KGC T +
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPF 769
Query: 341 NAVISNYISVGDFD---ECM-KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
NA+I+ G + E + + G +PN TY +I L K + A E+F
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFH 829
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+M + ++P+ T TS L G ++ +A G + Y +++ G
Sbjct: 830 QMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889
Query: 457 KCGMLLDLWHEMQESGYPSDG-----EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L L +M DG +++G +G++E A VME +R + P
Sbjct: 890 MTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949
Query: 512 RLVYSKLSNK-LLASNK 527
+L N+ ++SN+
Sbjct: 950 SATVIELINESCISSNQ 966
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 161/373 (43%), Gaps = 15/373 (4%)
Query: 168 VIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDF 227
V++ AL R D +V M + V D++T +++ + RAG V +L + E
Sbjct: 191 VLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEK- 249
Query: 228 GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNV-MTYNIVISGWSKLGQVVEM 286
+F +LNV A L SM K L + TY+++I G K+ ++ +
Sbjct: 250 --EFRTATLNV-----------DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDA 296
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
+ +L E+ + G S D+ T+S LI+GL + D A + M G Y+ I
Sbjct: 297 KSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICV 356
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
G ++ + GM + P Y LI G + + V E+ EM R IV S
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
T + ++ +CS G A + K+ GC+ ++ Y L++ + G + +
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
EM+E G D Y +I GL +++ A + E + G P+ Y + + ++
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 527 KLESAYNLFRKIK 539
+ SA ++++
Sbjct: 537 EFASADKYVKEMR 549
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 194/433 (44%), Gaps = 42/433 (9%)
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG---VNPDLETLSI 203
+ FF WA K N D+ +Y +++ L F M ++ +M + + P LS
Sbjct: 79 IQFFKWAGKRRNFEHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGP--ADLSE 136
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KG 261
V+ +A V KA+ + +++ K A + N ++ L Q H L++ M +G
Sbjct: 137 VVKILGKAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEG 196
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS------------------- 302
+ MTY++++S + KLG+ R+ E+ A G P +
Sbjct: 197 DCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGDEKAL 256
Query: 303 ---------------LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
T++ LI+GLG++GR++DA VF M + GC PD N +I+ +
Sbjct: 257 GLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIF 316
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA-DALEVFEEMLDRGIVPS 406
G ++ +K + M S C PN+ TY +I L +S+ A +A FE+M G+ PS
Sbjct: 317 GKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPS 376
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
+ T + ++ C A+++ ++ + G AY L+ L + +L+
Sbjct: 377 SFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFL 436
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
E++E+ S IY +I L G+ AV + E + G P Y+ L + L+ +
Sbjct: 437 ELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAG 496
Query: 527 KLESAYNLFRKIK 539
+E A++ R ++
Sbjct: 497 MIEEAFSALRTME 509
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 194/414 (46%), Gaps = 6/414 (1%)
Query: 129 LDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSD 188
L V K++ + + +A+ +F+ IK +YN ++ L + + + + +
Sbjct: 134 LSEVVKILGKAKMVNKALSVFYQ--IKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHE 191
Query: 189 MAKEG-VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
M EG PD T S+++ +F++ G+ AI++ ++ GL A+ + L + +
Sbjct: 192 MCNEGDCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAK-IYTTLLAIYFKS 250
Query: 248 HVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
A L MK K V TY +I G K G+V + V ++ +G PD + +
Sbjct: 251 GDEKALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLIN 310
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN-YISVGDFDECMKYYKGMSS 365
LI G+AGR++DA+++FD M+ C P+ YN VI + S E +++ M +
Sbjct: 311 NLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKA 370
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
P+ TY+ LI G K+ +V AL + EEM ++G P S + L A
Sbjct: 371 NGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEA 430
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A ++ + ++ + S Y ++++ L G+ +DL++EM++ G D Y +++
Sbjct: 431 ANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMS 490
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
GL G +E A + G P ++ + N L + + E A +F K+K
Sbjct: 491 GLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMK 544
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 156/353 (44%), Gaps = 2/353 (0%)
Query: 142 SGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
SG+ L +K A V +Y ++K LG+ + +V +M K+G PD+ +
Sbjct: 250 SGDEKALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLI 309
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ-RLHVGAASSLFNSMK 260
+ +++ F +AG++ A+++ ++ + + N V+ L + + A+S F MK
Sbjct: 310 NNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMK 369
Query: 261 GK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
V + TY+I+I G+ K +V + +L+E+ +GF P + LI LG+A R +
Sbjct: 370 ANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYE 429
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
A E+F +KE Y +I N G E + + M C P++ Y L+
Sbjct: 430 AANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALM 489
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
SGL+++ + +A M + G P + L L G P A M+ K + K
Sbjct: 490 SGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIK 549
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+Y +L LS G L EM G+ D Y ++ + + +
Sbjct: 550 PDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAVGKVDE 602
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y V++K LG+ ++ ++M K G NPD+ + +M +RAG + +A L +E
Sbjct: 450 YAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTME 509
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVV 284
+ G D S N++L L + A+ +F MK ++ + ++YN ++ S+ G
Sbjct: 510 ENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFE 569
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
E ++++E+ + GF D +T+S ++E +G+ D+
Sbjct: 570 EAAKLMREMGSRGFEYDHITYSSILEAVGKVDEDDE 605
>gi|297839881|ref|XP_002887822.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333663|gb|EFH64081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 407
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 173/371 (46%), Gaps = 13/371 (3%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDF-MCNVLSD--MAKEGVNPDLETLSIVM 205
FFNW K +++N ++ LG K+F+F C L + + P+ T IV
Sbjct: 27 FFNWVEKESGFRHTTETFNRMIDILG--KYFEFETCWALINRMIGNPESLPNHVTFRIVF 84
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL-FNS---MKG 261
++ A V +AI +L+DF L+ D N+V LC+ HV A L F G
Sbjct: 85 KRYVTAHLVQEAIDAYDKLDDFNLRDDTSFYNLVD-ALCEHKHVVEAEELCFGKNVIAHG 143
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
+ N +N+++ GWSKLG + + ++ EG D ++S ++ + ++G+ A
Sbjct: 144 FSVSNTKIHNLILRGWSKLGWWGKCKEYWDKMDTEGVPKDLFSYSIYMDIMCKSGKPWKA 203
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
++++ MK + D AYN VI + + ++ ++ M CEPN+ T+ +I
Sbjct: 204 VKLYKEMKSRRIKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKL 263
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L + ++ DA + +EM +G P + S++ P + ++ + + G +
Sbjct: 264 LCEDGRMRDAYRMLDEMPKKGCQPDS---ISYMCLFSRLEKPSEILSLFGRMIRSGVRPK 320
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ Y +L+R+ +G +L +W M+ESG D Y VI L G L+ A E
Sbjct: 321 MDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEE 380
Query: 502 ESLRKGFCPSR 512
E + +G P R
Sbjct: 381 EMIERGLSPRR 391
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 111/236 (47%), Gaps = 4/236 (1%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV--ISNYISVGDFDECM 357
P+ +TF + + A + +AI+ +D + + DT+ YN V + + V + +E +
Sbjct: 75 PNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDDTSFYNLVDALCEHKHVVEAEE-L 133
Query: 358 KYYKGMSSYNCE-PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
+ K + ++ N + ++ G K E +++M G+ + + +++
Sbjct: 134 CFGKNVIAHGFSVSNTKIHNLILRGWSKLGWWGKCKEYWDKMDTEGVPKDLFSYSIYMDI 193
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
+C G P A+ +YK+ + KL + AY ++R + + ++ EM+E G +
Sbjct: 194 MCKSGKPWKAVKLYKEMKSRRIKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPN 253
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
+ +I LC G++ +A +++E +KG P + Y L ++L +++ S +
Sbjct: 254 VATHNTIIKLLCEDGRMRDAYRMLDEMPKKGCQPDSISYMCLFSRLEKPSEILSLF 309
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 167/396 (42%), Gaps = 38/396 (9%)
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
+ FF WA K N D +Y ++ L M + +M + LS ++
Sbjct: 108 IQFFKWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVK 167
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVL 264
+A V KA+ + +++ K + + N ++ L Q H L+N M +G L
Sbjct: 168 VLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCL 227
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
PD++T+S LI G+ GR D AI +
Sbjct: 228 -----------------------------------PDTVTYSALIAAFGKLGRDDSAISL 252
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
FD MKE G P Y ++ Y +G ++ + + M C + TYT LI G+ K
Sbjct: 253 FDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGK 312
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+ KV +A +F ML G P I + + L G A+ ++++ + C ++
Sbjct: 313 AGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVT 372
Query: 445 YKLLLRRLSGFGKCGMLLDLWHE-MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
Y +++ L LW+E M+E+G Y +I G C ++E A+L++EE
Sbjct: 373 YNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEM 432
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
KGF P Y L N L + + E+A LF++++
Sbjct: 433 DEKGFAPCPAAYCSLINALGKAKRYEAANELFQELR 468
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 194/417 (46%), Gaps = 11/417 (2%)
Query: 129 LDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSD 188
L + KV+ + + +A+ +F+ IK +YN ++ L + + + + ++
Sbjct: 162 LSEIVKVLGKAKMVNKALSIFYQ--IKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNE 219
Query: 189 MAKEG-VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
M EG PD T S ++ +F + G+ AI + +++ GL A+ +L +
Sbjct: 220 MCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLG 279
Query: 248 HVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
V A L MK K V TY +I G K G+V E + ++ EG PD + +
Sbjct: 280 RVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLIN 339
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN-YISVGDFDECMKYYKGMSS 365
LI LG+AGR+ DAI++F+ M+ C P+ YN VI + S E +Y+ M
Sbjct: 340 NLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKE 399
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
P+ TY+ LI G K+ +V AL + EEM ++G P S + L A
Sbjct: 400 NGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEA 459
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEY 482
A ++++ R+ S Y ++++ L GKCG L +DL++EM++ G D Y
Sbjct: 460 ANELFQELRENCGYSSARVYAVMIKHL---GKCGRLSEAVDLFNEMKKLGCNPDVYAYNA 516
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+++G+ +G + A ++ G P ++ + N + + A +F ++K
Sbjct: 517 LMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMK 573
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 153/333 (45%), Gaps = 37/333 (11%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K A V +Y ++K +G+ + ++ +M KEG PD+ ++ +++ +AG+
Sbjct: 291 MKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGR 350
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ-RLHVGAASSLFNSMK-GKVLFNVMTYN 271
+ AI++ +E + + N V+ L + + A + MK V+ + TY+
Sbjct: 351 LADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYS 410
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSP------------------------------- 300
I+I G+ K +V + +L+E+ +GF+P
Sbjct: 411 ILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELREN 470
Query: 301 ----DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
+ ++ +I+ LG+ GR+ +A+++F+ MK+ GC PD AYNA++S + VG DE
Sbjct: 471 CGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEA 530
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
+ M C P+++++ +++G ++ A+E+F M + I P + + L
Sbjct: 531 HSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGC 590
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
L G A + K+ G + L Y +L
Sbjct: 591 LSRAGMFEEAAKLMKEMNSKGFEYDLITYSSIL 623
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 158/348 (45%), Gaps = 7/348 (2%)
Query: 195 NPDLETLSIVMDSFIRAGQVYK-AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAAS 253
NP + TL + FIR +++K LE LK D + VL + +HV
Sbjct: 55 NPSVRTLD---ERFIRILKIFKWGPDAEKALEVLKLKVDHRLVREVLKIDVE-IHVKIQF 110
Query: 254 SLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
+ + + TY +I + G + EM + ++E+V S +++ LG
Sbjct: 111 FKWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLG 170
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY-NCEPNM 372
+A ++ A+ +F +K + C P +N YN++I + G ++ + Y M + +C P+
Sbjct: 171 KAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDT 230
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
TY+ LI+ K + A+ +F+EM + G+ P+ T+ L G A+ + ++
Sbjct: 231 VTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQE 290
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
++ GC L++ Y L++ + GK ++ M + G D + +I L G+
Sbjct: 291 MKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGR 350
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN-KLESAYNLFRKIK 539
L +A+ + EE P+ + Y+ + L S + A+ + K+K
Sbjct: 351 LADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMK 398
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 185/410 (45%), Gaps = 5/410 (1%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
V+ N G +G+A LF + V DV +YN+I+ AL + + D VL M
Sbjct: 271 VIHGFFNEGE-TGKACSLFHE--MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMT 327
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+G PD T S ++ + G++ +A +M ++ GL + + N L LC+
Sbjct: 328 TDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSK 387
Query: 251 AASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A+ F+SM K ++ +Y ++ G++ G +M + + + G + + F+ LI
Sbjct: 388 EAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILI 447
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
+ G +DDA+ +F M+++G PD Y+ VIS + +G + M+ + M + +
Sbjct: 448 HAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQ 507
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV-PSTGTITSFLEPLCSYGPPHAAMM 428
PN Y+ +I G + A E+ EM+++GI P +S + LC G A
Sbjct: 508 PNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHD 567
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++ A +G + + + L+ GK + M+ G D Y ++ G
Sbjct: 568 IFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYF 627
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G++ + + + E RKG P+ + Y + L + + +A F ++
Sbjct: 628 KNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEM 677
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 183/395 (46%), Gaps = 3/395 (0%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
M+ FN ++K +A + + +++ A +R D + ++M ++GV+PD+ T S V+
Sbjct: 424 MIGLFN-SMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVI 482
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKV 263
+F R G++ A++ ++ G++ + + ++ C + A L + M KG
Sbjct: 483 STFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIP 542
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+++ ++ VI+ K G+V++ + G P +TF+ LI+G G++D A +
Sbjct: 543 RPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFK 602
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+ D M+ G PD YN ++ Y G ++ + ++ M +PN TY +++GL
Sbjct: 603 ILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLF 662
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
++ + A + F EM++ G + L LC A+++++K + K S+T
Sbjct: 663 RAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSIT 722
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
++ + + +L+ + SG + Y +I L G +E+A +
Sbjct: 723 ILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSM 782
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ G P + +++ LL ++ A N K+
Sbjct: 783 EKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKV 817
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 173/380 (45%), Gaps = 4/380 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEG--VNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
SY++++KAL ++L MAK+G +PD+ S V+ F G+ KA +
Sbjct: 230 SYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFH 289
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+ G+K D + N+++ LC+ + A + M + +TY+ +I G++ LG
Sbjct: 290 EMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLG 349
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ E ++ +E+ G P+ +T + + L + GR +A E FD+M KG PD +Y
Sbjct: 350 RLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYC 409
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++ Y S G F + + + M S N +T LI K V DA+ +F EM +
Sbjct: 410 TLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQ 469
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G+ P T ++ + G AM + + G + + Y +++ G
Sbjct: 470 GVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKA 529
Query: 462 LDLWHEMQESGYP-SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+L EM G P D + VI LC G++ +A + + + G P + ++ L +
Sbjct: 530 KELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLID 589
Query: 521 KLLASNKLESAYNLFRKIKI 540
K++ A+ + +++
Sbjct: 590 GYCLVGKMDKAFKILDAMEV 609
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 156/351 (44%), Gaps = 5/351 (1%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC--QRLHVGAAS 253
P T +I+MD RA + + + G + GLK D + N +L CLC R
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214
Query: 254 SLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG--FSPDSLTFSFLIEG 311
L + + N ++Y+IV+ +L+ + +G SPD + +S +I G
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
G A +F M +G PD YN +I D+ + M++ +P+
Sbjct: 275 FFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPD 334
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
TY+ +I G ++ +A ++F EM RG++P+ T SFL LC +G A +
Sbjct: 335 TVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFD 394
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
G K + +Y LL + G ++ L++ M+ +G ++ ++ +I G
Sbjct: 395 SMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRG 454
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+++A+L+ E ++G P + YS + + +L A F ++ +AR
Sbjct: 455 MVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQM-VAR 504
>gi|255661008|gb|ACU25673.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 369
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 176/351 (50%), Gaps = 8/351 (2%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQV---YKAIQMLGRLEDFGLKFDAESLNVVLW 241
V D+ V+PD + +++ F RAG++ ++ +M+GR + + S N+++
Sbjct: 12 VYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGREGNRSVA----SFNIMMR 67
Query: 242 CLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
L V +S++ MK G + + +TY I++ G+ K G + + RVL+ +G
Sbjct: 68 GLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLETAERKGGVL 127
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
D+ +S +I GL + +++ AI V + M + GC P+T+ YNA+I+ I ++ ++ +
Sbjct: 128 DAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASKSEDAIRVF 187
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
+ M +C P + TY LI+GL KS + +A ++ +EML++G+ PS T + ++ LC
Sbjct: 188 REMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSLLMKGLCLG 247
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
A+ ++ + K G K + + L+ L GK + L L+ +M +
Sbjct: 248 HKIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQLALSLYLDMNYWNCAPNLVTQ 307
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
++ G G + NA+++ L+ P + Y+ L + N++ A
Sbjct: 308 NTLMEGFYKDGDMRNALVIWARILKNELQPDIISYNITLKGLCSCNRISDA 358
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 153/355 (43%), Gaps = 4/355 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
I V+ D YN ++ R + M +EG N + + +I+M G+
Sbjct: 16 IVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGREG-NRSVASFNIMMRGLFDNGR 74
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYN 271
V + + ++ G D+ + +++ C+ ++ + + + KG VL + Y+
Sbjct: 75 VDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLETAERKGGVL-DAFAYS 133
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I+G K ++ + VL ++ G P++ ++ LI GL A + +DAI VF M
Sbjct: 134 AMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASKSEDAIRVFREMGIT 193
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
C P YN +I+ F E K M P++ TY+ L+ GL K+ A
Sbjct: 194 HCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKIEMA 253
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
L+++ ++ G P + + LCS G A+ +Y C +L L+
Sbjct: 254 LQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQLALSLYLDMNYWNCAPNLVTQNTLMEG 313
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
G L +W + ++ D Y + GLC+ ++ +A+L + +++RK
Sbjct: 314 FYKDGDMRNALVIWARILKNELQPDIISYNITLKGLCSCNRISDAILFLNDAVRK 368
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 141/318 (44%), Gaps = 36/318 (11%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
W + + V S+N++++ L D + ++ M K G D T I++ F +
Sbjct: 48 WEMMGREGNRSVASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKN 107
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG---------- 261
G + K++++L E G DA + + ++ LC+ + A S+ N M
Sbjct: 108 GYINKSLRVLETAERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVY 167
Query: 262 KVLFN--------------------------VMTYNIVISGWSKLGQVVEMERVLKEIVA 295
L N ++TYNI+I+G K + E ++KE++
Sbjct: 168 NALINGLIGASKSEDAIRVFREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLE 227
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+G +P +T+S L++GL +I+ A+++++ + + G PD +N +I SVG
Sbjct: 228 KGLTPSVITYSLLMKGLCLGHKIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQL 287
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+ Y M+ +NC PN+ T L+ G K + +AL ++ +L + P + L+
Sbjct: 288 ALSLYLDMNYWNCAPNLVTQNTLMEGFYKDGDMRNALVIWARILKNELQPDIISYNITLK 347
Query: 416 PLCSYGPPHAAMMMYKKA 433
LCS A++ A
Sbjct: 348 GLCSCNRISDAILFLNDA 365
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 1/258 (0%)
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + ERV K+IV SPD++ ++ ++ G RAGRI D E+++ M +G ++
Sbjct: 4 GDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGREG-NRSVASF 62
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N ++ G DE ++ M + TY L+ G K+ + +L V E
Sbjct: 63 NIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLETAER 122
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G V ++ + LC A+ + K GCK + Y L+ L G K
Sbjct: 123 KGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASKSED 182
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ ++ EM + Y +I GLC + A +++E L KG PS + YS L
Sbjct: 183 AIRVFREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSLLMK 242
Query: 521 KLLASNKLESAYNLFRKI 538
L +K+E A L+ ++
Sbjct: 243 GLCLGHKIEMALQLWNQV 260
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 135/293 (46%), Gaps = 2/293 (0%)
Query: 244 CQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C+ + A ++ + KV + + YN +++G+ + G++ + + + + EG +
Sbjct: 1 CESGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGREG-NRSV 59
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+F+ ++ GL GR+D+ +++ MK+ G D+ Y ++ + G ++ ++ +
Sbjct: 60 ASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLET 119
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
+ Y+ +I+GL K K+ A+ V M+ G P+T + + L
Sbjct: 120 AERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASK 179
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A+ ++++ C ++ Y +L+ L + G DL EM E G Y
Sbjct: 180 SEDAIRVFREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKGLTPSVITYSL 239
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
++ GLC ++E A+ + + + GF P +++ L + L + K + A +L+
Sbjct: 240 LMKGLCLGHKIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQLALSLY 292
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 101/224 (45%), Gaps = 1/224 (0%)
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
+G ID A V+ + + PD YNA+++ + G +C + ++ M ++ +
Sbjct: 3 SGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGREG-NRSVAS 61
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
+ ++ GL + +V + ++E M G V + T + C G + ++ + + A
Sbjct: 62 FNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLETAE 121
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
+ G L AY ++ L K + + + M +SG + +Y +I GL + E
Sbjct: 122 RKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASKSE 181
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+A+ V E P+ + Y+ L N L S + AY+L +++
Sbjct: 182 DAIRVFREMGITHCSPTIVTYNILINGLCKSERFGEAYDLVKEM 225
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 7/195 (3%)
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
GD D + YK + P+ Y +++G ++ ++ D E++E M+ R S +
Sbjct: 4 GDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWE-MMGREGNRSVASF 62
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHE 467
+ L G +++ +K G Y +L+ GF K G + L +
Sbjct: 63 NIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVH---GFCKNGYINKSLRVLET 119
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
+ G D Y +I GLC +LE A+ V+ ++ G P+ VY+ L N L+ ++K
Sbjct: 120 AERKGGVLDAFAYSAMINGLCKETKLEKAISVLNGMIKSGCKPNTHVYNALINGLIGASK 179
Query: 528 LESAYNLFRKIKIAR 542
E A +FR++ I
Sbjct: 180 SEDAIRVFREMGITH 194
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 175/372 (47%), Gaps = 4/372 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN +V D ++++M V PD T + ++ G+ A+ +L +
Sbjct: 2 AYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
D + ++L C+R A L + M+ K +++TYN+V++G + G+V
Sbjct: 59 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ LK + + G P++++++ +++GL A R +DA E+ M +KGC P+ +N +
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS G + ++ + + Y C PN +Y L+ K +K+ A+ + M+ RG
Sbjct: 179 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 238
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P + + L LC G A+ + + + GC L +Y ++ L+ GK L+
Sbjct: 239 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE 298
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L +EM G D Y + AGLC ++E+A+ + G P+ ++Y+ + L
Sbjct: 299 LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLC 358
Query: 524 ASNKLESAYNLF 535
+ SA +LF
Sbjct: 359 KRRETHSAIDLF 370
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 163/333 (48%), Gaps = 4/333 (1%)
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFN 266
+ AGQ+ A +++ + ++ DA + N ++ LC R A ++ + M + + + +
Sbjct: 10 YCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPD 66
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V+TY I++ K + ++L E+ +G +PD +T++ ++ G+ + GR+DDAIE
Sbjct: 67 VVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLK 126
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
+ GC P+T +YN V+ + +++ + M C PN+ T+ LIS L +
Sbjct: 127 NLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKG 186
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
V ALEV E++ G P++ + L C AM GC + +Y
Sbjct: 187 LVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYN 246
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
LL L G+ + ++L H++++ G Y VI GL G+ + A+ ++ E + K
Sbjct: 247 TLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK 306
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G P + YS ++ L +++E A F K++
Sbjct: 307 GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ 339
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 122/242 (50%), Gaps = 1/242 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V ++N+++ L R+ + VL + K G P+ + + ++ +F + ++ KA+ L
Sbjct: 171 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 230
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM-TYNIVISGWSKL 280
+ G D S N +L LC+ V A L + +K K V+ +YN VI G +K
Sbjct: 231 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 290
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ E +L E+V++G PD +T+S + GL R RI+DAI F +++ G P+T Y
Sbjct: 291 GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLY 350
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
NA+I + + + M C PN TYT LI GL + +A ++ +E+
Sbjct: 351 NAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCS 410
Query: 401 RG 402
R
Sbjct: 411 RA 412
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K A + SYN ++ L + +L++M +G+ PD+ T S + R +
Sbjct: 268 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDR 327
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
+ AI+ G+++D G++ + N ++ LC+R +A LF M G + N TY I
Sbjct: 328 IEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 387
Query: 273 VISGWSKLGQVVEMERVLKEIVA 295
+I G + G + E +L E+ +
Sbjct: 388 LIEGLAYEGLIKEARDLLDELCS 410
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 140/260 (53%), Gaps = 5/260 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PNV +YN ++ + GR + + +V ++M + G PD T ++D +AG +
Sbjct: 412 QPNVV----TYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLD 467
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVI 274
A++M R++ GL D + +V++ CL + H+ AA LF M + + N++TYNI+I
Sbjct: 468 FALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMI 527
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+ +K ++ +++ + GF PD +T+S ++E LG G +D+A VF MK K
Sbjct: 528 ALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWV 587
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD Y ++ + G+ ++ ++Y+ M + PN+ T L+S L+ K+ADA +
Sbjct: 588 PDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAYNL 647
Query: 395 FEEMLDRGIVPSTGTITSFL 414
+ ML+ G+ PS T T L
Sbjct: 648 LQSMLELGLNPSLQTYTLLL 667
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 153/329 (46%), Gaps = 30/329 (9%)
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNV--MTYNI 272
Y+A Q+L +L+D + +LN W +K + FN TY
Sbjct: 348 YQANQVLKQLQDHTV-----ALNFFYW-----------------LKRQPGFNHDGHTYTT 385
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
++ + Q + ++L ++V +G P+ +T++ LI GRA ++DA++VF+ M+ G
Sbjct: 386 MVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVG 445
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
C PD Y +I + G D ++ Y+ M + P+ TY+ +I+ L K+ +A A
Sbjct: 446 CEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAH 505
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
++F EM+++G VP+ T + +A+ +Y+ + G + Y +++ L
Sbjct: 506 KLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVL 565
Query: 453 SGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
G CG L + ++ EM+ + D +Y ++ G +E A + L G
Sbjct: 566 ---GHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLR 622
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ + L + L +KL AYNL + +
Sbjct: 623 PNVPTCNSLLSAFLRVHKLADAYNLLQSM 651
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 156/365 (42%), Gaps = 40/365 (10%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVL-FFNWAIKHPNVAKDVK 164
L++++ E+AL N+N + +V+ + L + L FF W + P D
Sbjct: 324 ILRQIRWGPAAEEALANLNYSMDPYQANQVLKQ--LQDHTVALNFFYWLKRQPGFNHDGH 381
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y +V LGR K F + +L M K+G P++ T + ++ S+ RA + A+ + +
Sbjct: 382 TYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEM 441
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVV 284
+ G + D V +C +H A G + F + Y
Sbjct: 442 QRVGCEPDR-----VTYCTLIDIHAKA---------GFLDFALEMY-------------- 473
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ + A G SPD+ T+S +I LG+AG + A ++F M E+GC P+ YN +I
Sbjct: 474 ------QRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMI 527
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ ++ +K Y+ M S +P+ TY+ ++ L + +A VF EM + V
Sbjct: 528 ALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWV 587
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P ++ G A Y+ G + ++ L LS F + L D
Sbjct: 588 PDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSL---LSAFLRVHKLADA 644
Query: 465 WHEMQ 469
++ +Q
Sbjct: 645 YNLLQ 649
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%)
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
++ G D + Y ++ F K M C+PN+ TY RLI ++ +
Sbjct: 372 RQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYL 431
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
DA++VF EM G P T + ++ G A+ MY++ + G Y ++
Sbjct: 432 NDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVI 491
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L G L+ EM E G + Y +IA ++A+ + + GF
Sbjct: 492 INCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGF 551
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P ++ YS + L L+ A +F ++K
Sbjct: 552 QPDKVTYSIVMEVLGHCGYLDEAEAVFSEMK 582
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 163/354 (46%), Gaps = 5/354 (1%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V SDM V PDL S +M F R+G + KA+ +++ GL D +++ C
Sbjct: 362 VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYC 421
Query: 245 QRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
++ + A +L N M + +V+TYN ++ G K + E +++ E+ PDS
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSY 481
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T + LI+G + G + +A+E+F MKEK D YN ++ + VGD D + + M
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADM 541
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
S P +Y+ L++ L +A+A V++EM+ + I P+ S ++ C G
Sbjct: 542 VSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNA 601
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLR---RLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
+K G +Y L+ R K L+ E ++ G D Y
Sbjct: 602 SDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE-EQGGLVPDVFTY 660
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
++ G C Q++ A +V+ + + +G P R Y+ + N ++ + L A+ +
Sbjct: 661 NSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 172/365 (47%), Gaps = 7/365 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
I V +V + N++V AL + + + LS + ++GV PD+ T + ++ ++ G
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
+ +A +++ + G + N V+ LC+ A +F M + + + TY
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
++ K G VVE E+V ++ + PD + FS ++ R+G +D A+ F+++KE G
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD Y +I Y G M M C ++ TY ++ GL K + + +A
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
++F EM +R + P + T+T ++ C G AM +++K ++ +L + Y L L
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL---L 522
Query: 453 SGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
GFGK G + ++W +M Y ++ LC+ G L A V +E + K
Sbjct: 523 DGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIK 582
Query: 510 PSRLV 514
P+ ++
Sbjct: 583 PTVMI 587
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 146/307 (47%), Gaps = 1/307 (0%)
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
+G ++ + ++ S +R G V A + + G+ + +LN+++ LC+ +
Sbjct: 194 KGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEK 253
Query: 252 ASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
+ + ++ K ++ +++TYN +IS +S G + E ++ + +GFSP T++ +I
Sbjct: 254 VGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVIN 313
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
GL + G+ + A EVF M G PD+ Y +++ GD E K + M S + P
Sbjct: 314 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP 373
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
++ ++ ++S +S + AL F + + G++P T ++ C G AM +
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
+ + GC + + Y +L L G L++EM E D +I G C +
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 491 GQLENAV 497
G L+NA+
Sbjct: 494 GNLQNAM 500
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 150/341 (43%), Gaps = 1/341 (0%)
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KG 261
+++ ++++A ++ +A + L G ++ N ++ L + V A ++ + +
Sbjct: 170 LLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRS 229
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
V NV T NI+++ K G++ ++ L ++ +G PD +T++ LI G +++A
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
E+ + M KG P YN VI+ G ++ + + M P+ TY L+
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
K V + +VF +M R +VP +S + G A+M + ++ G
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
Y +L++ G + ++L +EM + G D Y ++ GLC L A +
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 469
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
E + P + L + L++A LF+K+K R
Sbjct: 470 EMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 114/285 (40%), Gaps = 73/285 (25%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A DV +YN I+ L +RK + ++M + + PD TL+I++D + G + A++
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 220 MLGRLEDFGLKFDAESLNVVL---------------WC--------------------LC 244
+ ++++ ++ D + N +L W LC
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ H+ A +++ M K + VM N +I G+ + G + E L+++++EGF PD +
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621
Query: 304 TFSFLI-------------------------------------EGLGRAGRIDDAIEVFD 326
+++ LI G R ++ +A V
Sbjct: 622 SYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLR 681
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
M E+G PD + Y +I+ ++S + E + + M P+
Sbjct: 682 KMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 106/235 (45%), Gaps = 14/235 (5%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWA-IKHPNVAKDVK 164
QK+K K + D V + LD GKV G++ + WA + +
Sbjct: 502 LFQKMKEKRIRLDV---VTYNTLLDGFGKV---GDIDTAKEI----WADMVSKEILPTPI 551
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SY+++V AL + V +M + + P + + ++ + R+G L ++
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM---KGKVLFNVMTYNIVISGWSKLG 281
G D S N +++ + ++ A L M +G ++ +V TYN ++ G+ +
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
Q+ E E VL++++ G +PD T++ +I G + +A + D M ++G PD
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 94/238 (39%), Gaps = 17/238 (7%)
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDA---------------IEVFDTMKEK--GCGPDTNAY 340
F SL+ S +I L R+GR+ DA +E+ +++ CG + + +
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVF 168
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +I Y+ E + + + S ++D LI L++ V A V++E+
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISR 228
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ + T+ + LC G + ++ G + Y L+ S G
Sbjct: 229 SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEE 288
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+L + M G+ Y VI GLC G+ E A V E LR G P Y L
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 115/308 (37%), Gaps = 35/308 (11%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N ++++I + + ++ E + ++GF+ + LI L R G ++ A V+
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS----- 380
+ G G + N +++ G ++ + + P++ TY LIS
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 381 ------------------------------GLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
GL K K A EVF EML G+ P + T
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
S L C G ++ R L + ++ + G L ++ ++E
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
+G D IY +I G C G + A+ + E L++G + Y+ + + L L
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 531 AYNLFRKI 538
A LF ++
Sbjct: 464 ADKLFNEM 471
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 106/267 (39%), Gaps = 5/267 (1%)
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
SG S+L E+ L + S DS+ F LI +A ++ +A E F ++ KG
Sbjct: 143 SGVSRL----EIVNSLDSTFSNCGSNDSV-FDLLIRTYVQARKLREAHEAFTLLRSKGFT 197
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
+A NA+I + + +G + Y+ +S N+ T +++ L K K+
Sbjct: 198 VSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTF 257
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
++ ++G+ P T + + S G A + G + Y ++ L
Sbjct: 258 LSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCK 317
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK +++ EM SG D Y ++ C G + V + + P +
Sbjct: 318 HGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVC 377
Query: 515 YSKLSNKLLASNKLESAYNLFRKIKIA 541
+S + + S L+ A F +K A
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEA 404
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 189/435 (43%), Gaps = 76/435 (17%)
Query: 148 LFFNW-AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
L + W +K + + +YN ++ L F D V M + PD+ T + ++
Sbjct: 206 LLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIK 265
Query: 207 SFIRAGQVYKAIQMLGRLE----------------------DF-------------GLKF 231
+ +AGQ KA++ L +E DF GL+
Sbjct: 266 GYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQV 325
Query: 232 DAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQVVEMERV 289
+ ++V+ LC+ + ++F +M KG NV Y ++I G++K G V + R+
Sbjct: 326 PPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKP-NVAIYTVLIDGYAKTGSVEDAIRL 384
Query: 290 LKEIVAEGFSPDSLTFSF-----------------------------------LIEGLGR 314
L ++ EGF+PD +T+S LI+GLG+
Sbjct: 385 LHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGK 444
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN-CEPNMD 373
AGR+D+A +F+ M EKGC D+ YNA+I + G DE + +K M C+ +
Sbjct: 445 AGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVY 504
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
TYT LISG+ K + +AL++++ M+D+GI P+ + + LC G A + +
Sbjct: 505 TYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDEL 564
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
+G L A + ++ L G+ L + E G G I +I L +G+
Sbjct: 565 APMGVILD-AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKA 623
Query: 494 ENAVLVMEESLRKGF 508
+ A+ +M + G+
Sbjct: 624 DLAMKLMHSKIGIGY 638
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 173/389 (44%), Gaps = 2/389 (0%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FF W+ K +++ Y +V L K D + + S++ K + + ++ SF
Sbjct: 138 FFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFICSEIRKFEFPMTVSPGNSLIKSF 197
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNV 267
+ G V + + + ++++ G++ + N ++ L + V +A +F M+ G++ +V
Sbjct: 198 GKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDV 257
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TYN +I G+ K GQ + L+ + +G D +T+ +I+ + ++
Sbjct: 258 VTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQE 317
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M EKG +A++ VI G +E ++ M +PN+ YT LI G K+
Sbjct: 318 MDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGS 377
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
V DA+ + M+D G P T + + LC G AM ++ R G ++ Y
Sbjct: 378 VEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSS 437
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L+ L G+ L+ EM E G D Y +I G+++ A+ + + +
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEE 497
Query: 508 FCPSRL-VYSKLSNKLLASNKLESAYNLF 535
C + Y+ L + + ++ E A L+
Sbjct: 498 GCDQTVYTYTILISGMFKEHRNEEALKLW 526
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 125/271 (46%), Gaps = 6/271 (2%)
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
N +I + KLG V E+ V +++ G P T++FL+ GL A +D A VF+ M+
Sbjct: 191 NSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
PD YN +I Y G + ++ + M + E + TY +I +
Sbjct: 251 GRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSS 310
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
+ +++EM ++G+ + + LC G + +++ + G K ++ Y +L+
Sbjct: 311 CVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLI- 369
Query: 451 RLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
G+ K G + D L H M + G+ D Y V+ GLC G++E A+ + G
Sbjct: 370 --DGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNG 427
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ + YS L + L + +++ A LF ++
Sbjct: 428 LAINSMFYSSLIDGLGKAGRVDEAERLFEEM 458
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 120/271 (44%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TYN +++G V ERV + + + PD +T++ +I+G +AG+ A+E M
Sbjct: 224 TYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVM 283
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ KG D Y +I + DF C+ Y+ M + ++ +I GL K K+
Sbjct: 284 ETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKL 343
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+ VFE M+ +G P+ T ++ G A+ + + G + Y ++
Sbjct: 344 NEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVV 403
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L G+ +D + + +G + Y +I GL G+++ A + EE KG
Sbjct: 404 VNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC 463
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y+ L + K++ A LF++++
Sbjct: 464 TRDSYCYNALIDAFTKHGKVDEALALFKRME 494
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 171/375 (45%), Gaps = 26/375 (6%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M EG P + ++ ++ R+G + A ++L ++ G + N+++ +C
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61
Query: 249 ------VGAASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
+G A +N M G VL V N +G+ + V++E++++GF P
Sbjct: 62 LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFT-RCLCCIGKFEKAYNVIREMMSKGFIP 120
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
DS T+S +I L A +++ A ++F MK G PD Y ++ + VG ++ ++
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
M C PN+ TYT LI LK+RK++ A E+FE ML G VP+ T T+ ++ C
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKA 240
Query: 421 GPPHAAMMMYKKA--------------RKVGCKL---SLTAYKLLLRRLSGFGKCGMLLD 463
G A +Y + R V +L ++ Y L+ L K D
Sbjct: 241 GETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARD 300
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L M G + IY+ +I G C +G+L+ A V + L G P+ YS L +KL
Sbjct: 301 LLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLF 360
Query: 524 ASNKLESAYNLFRKI 538
+L+ A + K+
Sbjct: 361 KDKRLDLALKVLTKM 375
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 188/411 (45%), Gaps = 48/411 (11%)
Query: 159 VAKDVKSYNVIVKALGR---------RKFFDFMCN---------VLSDMAKEGVNPDLET 200
+ K K+YNVI + + + K ++CN + +M + G+ PD+ T
Sbjct: 100 IGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYT 159
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM- 259
+ ++D F + G + +A ++ G + + ++ + + A+ +F M
Sbjct: 160 YTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMML 219
Query: 260 KGKVLFNVMTYNIVISGWSKLGQ-----------------VVEMERVLKEIVAEGFSPDS 302
+ N++TY +I G K G+ + +++ + + +E P+
Sbjct: 220 SNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNV 279
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+T+ L++GL +A ++ +A ++ +TM +GC P+ Y+A+I + VG DE + +
Sbjct: 280 VTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTK 339
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M + C PN+ TY+ LI L K +++ AL+V +ML+ P+ T ++ LC G
Sbjct: 340 MLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGK 399
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEI 479
A + + GC ++ Y + + GFGK G + L+L M G +
Sbjct: 400 TDEAYRLMLMMEEKGCYPNVVTYTAM---IDGFGKAGRVDRCLELLQLMTSKGCAPNFIT 456
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPS-----RLVYSKLSNKLLAS 525
Y +I C G L++A ++EE +++ + P R V S++ +AS
Sbjct: 457 YRVLINHCCAAGLLDDAHKLLEE-MKQTYWPKHIGMYRKVIEGFSHEFVAS 506
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 173/402 (43%), Gaps = 24/402 (5%)
Query: 151 NW--AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
NW ++ A +V +Y ++ A + + + M G P++ T + ++D
Sbjct: 178 NWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGH 237
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM 268
+AG+ KA Q+ R+++ K D +++ + L NV+
Sbjct: 238 CKAGETEKACQIYARMKND--KVDIPDVDIYFRIVDSELKEP---------------NVV 280
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TY ++ G K +V E +L+ + EG P+ + + LI+G + G++D+A EVF M
Sbjct: 281 TYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKM 340
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
GC P+ Y+++I D +K M +C PN+ YT ++ GL K K
Sbjct: 341 LGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKT 400
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A + M ++G P+ T T+ ++ G + + + GC + Y++L
Sbjct: 401 DEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVL 460
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ G L EM+++ +P +Y VI G + + ++ ++ E G
Sbjct: 461 INHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSH--EFVASLGLLAELSEDGS 518
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKI---KIARQNDYA 547
P VY L + + + +LE A L ++ A QN Y
Sbjct: 519 VPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQNTYV 560
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 133/303 (43%), Gaps = 45/303 (14%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y+ ++ + D V + M G +P++ T S ++D + ++ A+++L ++
Sbjct: 317 YDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKML 376
Query: 226 DFGLKFDAESLNVVLWC-----LCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSK 279
+ ++ + NVV++ LC+ A L M+ K + NV+TY +I G+ K
Sbjct: 377 E-----NSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGK 431
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK---------- 329
G+V +L+ + ++G +P+ +T+ LI AG +DDA ++ + MK
Sbjct: 432 AGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGM 491
Query: 330 -----------------------EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
E G P Y +I N+I G + ++ ++ +SS+
Sbjct: 492 YRKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSF 551
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
+ +TY LI L + KV A +++ +M RG VP + ++ L G A
Sbjct: 552 S-AAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEA 610
Query: 427 MMM 429
+ +
Sbjct: 611 LQL 613
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 102/256 (39%), Gaps = 12/256 (4%)
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
++ EG P + F+ L+ R+G A ++ M G P YN +I S D
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61
Query: 353 FDECMKYYKGMSSYN---------CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+YN + N+ +TR + + K K A V EM+ +G
Sbjct: 62 LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEK---AYNVIREMMSKGF 118
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+P + T + + LC+ A ++++ ++ G + Y LL R G +
Sbjct: 119 IPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARN 178
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ EMQ+ G + Y +I +L A + E L G P+ + Y+ L +
Sbjct: 179 WFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHC 238
Query: 524 ASNKLESAYNLFRKIK 539
+ + E A ++ ++K
Sbjct: 239 KAGETEKACQIYARMK 254
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 110/247 (44%), Gaps = 4/247 (1%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ A +V Y +V L + D ++ M ++G P++ T + ++D F +AG+V +
Sbjct: 379 SCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRC 438
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISG 276
+++L + G + + V++ C + A L MK ++ Y VI G
Sbjct: 439 LELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEG 498
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+S + V +L E+ +G P + LI+ +AGR++ A+E+ + +
Sbjct: 499 FSH--EFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFS-AAY 555
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
N Y ++I + D+ K Y M+ P + LI GLL+ K +AL++ +
Sbjct: 556 QNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSD 615
Query: 397 EMLDRGI 403
+ I
Sbjct: 616 SICQMDI 622
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 189/420 (45%), Gaps = 41/420 (9%)
Query: 138 RGNLSGEAMVLFFNW--AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
G+ G+ M F +K +A V +Y+VI+ L R +L +M G+
Sbjct: 398 EGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLK 457
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLN--VVLWCLCQRLHVGAAS 253
P+ + +M + + G+V ++ +L R+ + G+ D N ++ +C +R+ A +
Sbjct: 458 PNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRME-EART 516
Query: 254 SLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP------------- 300
L ++ ++ N TY I G+SK G++ +R E+++ G P
Sbjct: 517 YLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHC 576
Query: 301 ----------------------DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
D T+S LI GL R G++ +A +F ++EKG P+
Sbjct: 577 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 636
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
YN++IS G+ D+ + + M P++ TY LI GL K+ ++ A +F+++
Sbjct: 637 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 696
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
RG+ P+ T + ++ C P AA + ++ G Y ++L K
Sbjct: 697 EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKF 756
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
LDL+ EM E G+ S + +I G C G+L+ A ++EE + K F P+ + Y+ L
Sbjct: 757 EKALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSL 815
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 176/381 (46%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D ++Y+++++ R + +L +M K + P + T S++++ R G +
Sbjct: 386 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 445
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+L + GLK +A ++ + V + + M+ + +L +V YN +I G+
Sbjct: 446 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGF 505
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K ++ E L E++ P++ T+ I+G +AG ++ A F+ M G P+
Sbjct: 506 CKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNV 565
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y A+I + G+ E ++ + S ++ TY+ LI GL ++ K+ +A +F E
Sbjct: 566 GIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSE 625
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ ++G++P+ T S + C G A + ++ G + Y +L+ L G+
Sbjct: 626 LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE 685
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+L+ +++ G + Y ++ G C A ++EE L +G P +Y+
Sbjct: 686 IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNV 745
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ N K E A +LF+++
Sbjct: 746 ILNFCCKEEKFEKALDLFQEM 766
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 171/381 (44%), Gaps = 1/381 (0%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
+ ++ +YNVI+ L R + D + M +G+ PDL T I+++ F + +A
Sbjct: 247 SPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKL 306
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWS 278
ML + D GLK + + N ++ ++ + A + + M + N++ +N +++G
Sbjct: 307 MLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVC 366
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G++ + +++E++ +G PDS T+S LIEG R + A E+ D MK++ P
Sbjct: 367 KAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVL 426
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
Y+ +I+ G+ + M +PN YT L++ K +V ++ + E M
Sbjct: 427 TYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM 486
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
++GI+P S + C A + + + + Y + S G+
Sbjct: 487 REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM 546
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+ ++EM G + IY +I G C G + A V L + YS L
Sbjct: 547 EIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVL 606
Query: 519 SNKLLASNKLESAYNLFRKIK 539
+ L + K+ A+ +F +++
Sbjct: 607 IHGLSRNGKMHEAFGIFSELQ 627
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 166/365 (45%), Gaps = 12/365 (3%)
Query: 177 KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESL 236
K FD MC V PD+ T + ++ + + G V A ++L + + G + +
Sbjct: 201 KVFDGMC-------AHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTY 253
Query: 237 NVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
NV++ LC+ + A L SM K L ++ TY+I+I+G+ + E + +L E++
Sbjct: 254 NVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMID 313
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN--AYNAVISNYISVGDF 353
G P+ +T++ LI+G R G I+ A + D M CG + N +N +++ G
Sbjct: 314 VGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMV--ACGIEANLIIWNTLLNGVCKAGKM 371
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
++ ++ + M EP+ TY+ LI G + + +A A E+ +EM R + P+ T +
Sbjct: 372 EKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVI 431
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
+ LC G + ++ G K + Y L+ + G+ + M+E G
Sbjct: 432 INGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGI 491
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
D Y +I G C ++E A + E L + P+ Y + + ++E A
Sbjct: 492 LPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADR 551
Query: 534 LFRKI 538
F ++
Sbjct: 552 YFNEM 556
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 159/343 (46%), Gaps = 2/343 (0%)
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
D++T S+++ R G++++A + L++ GL +A + N ++ C++ +V AS L
Sbjct: 599 DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLL 658
Query: 257 NSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
M K + +++TYNI+I G K G++ + + +I G +P+ +T++ +++G ++
Sbjct: 659 EEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKS 718
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
A ++ + M +G PD YN +++ F++ + ++ M + ++
Sbjct: 719 KNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SF 777
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
LI G KS K+ +A + EEM+++ +P+ T TS ++ C G A ++ + ++
Sbjct: 778 NTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQE 837
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
+ Y LL G + L+ EM G D Y +I C G +
Sbjct: 838 RNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVME 897
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
A + +E L KG S Y L L + L +I
Sbjct: 898 ACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEI 940
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 202/475 (42%), Gaps = 53/475 (11%)
Query: 84 KRIDSSRA-----VDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKV--- 135
KR++ +R ++ L P G F+ G +E A N LS V+ V
Sbjct: 509 KRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIY 568
Query: 136 -------VNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSD 188
GN++ V F I V +DV++Y+V++ L R + S+
Sbjct: 569 TALIEGHCKEGNVTEAFSVFRF---ILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSE 625
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
+ ++G+ P+ T + ++ + G V KA Q+L + G+ D + N+++ LC+
Sbjct: 626 LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE 685
Query: 249 VGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD------ 301
+ A +LF+ ++G+ L N +TY ++ G+ K ++L+E++ G PD
Sbjct: 686 IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNV 745
Query: 302 ----------------------------SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
+++F+ LIEG ++G++ +A + + M EK
Sbjct: 746 ILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQF 805
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
P+ Y ++I + G E + + M N P TYT L+ G +++
Sbjct: 806 IPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSA 865
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+FEEM+ +GI P T ++ C G A + + G +S+ AY L++ L
Sbjct: 866 LFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALC 925
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ +L L +E+ ESG+ + G G ++ A V+ ++ G+
Sbjct: 926 KKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGW 980
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 177/374 (47%), Gaps = 12/374 (3%)
Query: 104 GVFLQKLKGKGVIEDAL-WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKD 162
G+F +L+ KG++ +A +N ++ +GN+ +A L IK N D
Sbjct: 621 GIF-SELQEKGLLPNAFTYN-------SLISGSCKQGNVD-KASQLLEEMCIKGIN--PD 669
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ +YN+++ L + + N+ D+ G+ P+ T + ++D + ++ A Q+L
Sbjct: 670 IVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLE 729
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQ 282
+ G+ DA NV+L C+ A LF M K + +++N +I G+ K G+
Sbjct: 730 EMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGK 789
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ E +L+E++ + F P+ +T++ LI+ +AG + +A ++ M+E+ P Y +
Sbjct: 790 LQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTS 849
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
++ Y ++G+ E ++ M + EP+ TY +I + V +A ++ +E+L +G
Sbjct: 850 LLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKG 909
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
+ S + ++ LC + + + + G +L L ++ R G
Sbjct: 910 MPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAA 969
Query: 463 DLWHEMQESGYPSD 476
++ M + G+ S+
Sbjct: 970 EVLRSMVKFGWVSN 983
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N + +++++ + K+G +VE V F P L+ + L+ L + +++ +VF
Sbjct: 144 NSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVF 203
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M PD Y +IS + VG+ + + M C PN+ TY +I GL ++
Sbjct: 204 DGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRA 263
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
R + +A+E+ M+D+G+VP T + C A +M + VG K Y
Sbjct: 264 RLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITY 323
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ G + EM G ++ I+ ++ G+C G++E A+ +M+E +
Sbjct: 324 NALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMME 383
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
KG P YS L + A+ L ++K
Sbjct: 384 KGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMK 417
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 123/258 (47%), Gaps = 2/258 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D YNVI+ + + F+ ++ +M ++G + + + +++ + ++G++ +A
Sbjct: 736 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEAN 794
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+L + + + + ++ C+ +G A L+ M+ + V+ TY ++ G+
Sbjct: 795 HLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGY 854
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+G + E+ + +E+VA+G PD +T+ +I+ R G + +A ++ D + KG
Sbjct: 855 HNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSV 914
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
AY+A+I +F E +K + + T + + G + + +A EV
Sbjct: 915 AAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRS 974
Query: 398 MLDRGIVPSTGTITSFLE 415
M+ G V +T ++ ++
Sbjct: 975 MVKFGWVSNTTSLGDLVD 992
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 41/235 (17%), Positives = 103/235 (43%), Gaps = 1/235 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S+N +++ + ++L +M ++ P+ T + ++D +AG + +A ++ +
Sbjct: 776 SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEM 835
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
++ + A++ +L ++ S+LF M K + + MTY ++I + + G V
Sbjct: 836 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNV 895
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+E ++ EI+ +G + LI+ L + + +++ + + E G + +
Sbjct: 896 MEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVI 955
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
+ G+ DE + + M + N + L+ G D+ + ++M
Sbjct: 956 ARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010
>gi|255660922|gb|ACU25630.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 484
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 183/382 (47%), Gaps = 10/382 (2%)
Query: 136 VNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
V G + E + FF W + + +++ I++ LGR + +L DM K+G+
Sbjct: 18 VLHGAKNAEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLE 77
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
D + +++DS+ +AG V +++++ ++E+ G++ +S + + + +R A
Sbjct: 78 WDXDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRY 137
Query: 256 FNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
FN M + + T+N++I G+ G+V R +++ + SPD +T++ +I G R
Sbjct: 138 FNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYR 197
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
++++A + F MK K P+ Y +I Y+SV D+ ++ + M Y +PN T
Sbjct: 198 VKKMEEAEKYFVEMKGKNIEPNVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAIT 257
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI-TSFLEPLCSYGPPHAAMMMYKKA 433
Y+ L+ GL + K+++A + +EMLD+ I P+ +I + C G AA + K
Sbjct: 258 YSTLLPGLCNAEKMSEARSILKEMLDKYIAPTDNSIFMRLISSQCKAGNLDAAADVLKAM 317
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE--------SGYPSDGEIYEYVIA 485
++ Y +L+ G+ + L ++ E S + Y +I
Sbjct: 318 IRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIILRPQSTLHMEPSAYNXMIE 377
Query: 486 GLCNIGQLENAVLVMEESLRKG 507
LCN GQ A ++ + L+ G
Sbjct: 378 YLCNNGQXAKAETLVRQLLKLG 399
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 111/251 (44%), Gaps = 1/251 (0%)
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
+L ++ +G D + +I+ G+AG + +++++F M+E G +Y+A+ +
Sbjct: 67 ILLDMPKKGLEWDXDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVIL 126
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTG 408
G + +Y+ M S EP T+ +I G S KV A FE+M R I P
Sbjct: 127 RRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVI 186
Query: 409 TITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM 468
T + + A + + + + ++ Y L++ + L L EM
Sbjct: 187 TYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPNVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 469 QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS-RLVYSKLSNKLLASNK 527
+ G + Y ++ GLCN ++ A +++E L K P+ ++ +L + +
Sbjct: 247 KGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMLDKYIAPTDNSIFMRLISSQCKAGN 306
Query: 528 LESAYNLFRKI 538
L++A ++ + +
Sbjct: 307 LDAAADVLKAM 317
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/176 (18%), Positives = 73/176 (41%), Gaps = 8/176 (4%)
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL--------EDFGLK 230
D +VL M + V + ++++++ +AGQ +A+++L +L L
Sbjct: 307 LDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIILRPQSTLH 366
Query: 231 FDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVL 290
+ + N ++ LC A +L + + + N +I G S+ G +L
Sbjct: 367 MEPSAYNXMIEYLCNNGQXAKAETLVRQLLKLGVQDPTALNTLIRGHSREGSPDSAFELL 426
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
K ++ + + L++ + DA D+M E PD++ + +V+ +
Sbjct: 427 KIMLRRKVDSEKSAYDSLVQSYLKKSEPXDAKAALDSMIENDHLPDSSLFRSVMES 482
>gi|357142780|ref|XP_003572691.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 173/365 (47%), Gaps = 4/365 (1%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F WA N + + ++ LG+ + D M ++LSDM G+ +E + +
Sbjct: 103 LFQWAQSSGNYKHTAYACSRMIDLLGKMRQIDQMWDLLSDMHCRGL-VTVEAAATSIRRL 161
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM 268
A + A+ + +L D GL+ + E++NV+L LC+ V A +F + + +
Sbjct: 162 AGARRWKDAVLLFDKLGDMGLERNTETMNVLLDALCKEKKVEVARKVFLVLSPHIQPDAY 221
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
T+NI + GW ++ E ++E+ A+GF P +T++ ++E + E+ D+M
Sbjct: 222 TFNIFVHGWCSARRIDEAMWTIEEMKAQGFPPSVITYTTVLEAYCKQHNFRMVYEILDSM 281
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+GC P+ Y ++++ F+E + M S C+P+ Y LI+ L K+ +
Sbjct: 282 SSEGCHPNVITYTMIMTSLAKCHMFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKAGHL 341
Query: 389 ADALEVFE-EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
++A +VF+ EM G+ S T + + C A+ + K+ CK L Y+
Sbjct: 342 SEASQVFQVEMPMNGVPRSLATYNTMISVFCYKDLDEDALSVLKEMETQSCKPDLQTYRP 401
Query: 448 LLRR-LSGFGKCGMLLDLWHE-MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
LLR LS G+ + +L +E M + D + Y +I GLC +G+ + A + +E +
Sbjct: 402 LLRLFLSRRGQDDTVRNLLNELMNKHSLGLDLDTYTLLIHGLCRVGETDWAYRLFDEMVG 461
Query: 506 KGFCP 510
P
Sbjct: 462 SEIVP 466
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 16/243 (6%)
Query: 279 KLGQVVEMERVLKEIVAEGF-SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K+ Q+ +M +L ++ G + ++ S I L A R DA+ +FD + + G +T
Sbjct: 129 KMRQIDQMWDLLSDMHCRGLVTVEAAATS--IRRLAGARRWKDAVLLFDKLGDMGLERNT 186
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
N ++ + K + +S + +P+ T+ + G +R++ +A+ EE
Sbjct: 187 ETMNVLLDALCKEKKVEVARKVFLVLSPH-IQPDAYTFNIFVHGWCSARRIDEAMWTIEE 245
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK---KARKVGCKLSLTAYKLLLRRLSG 454
M +G PS T T+ LE C H M+Y+ GC ++ Y +++ +
Sbjct: 246 MKAQGFPPSVITYTTVLEAYCKQ---HNFRMVYEILDSMSSEGCHPNVITYTMIM---TS 299
Query: 455 FGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
KC M L + H M+ SG D Y +I L G L A V + + P
Sbjct: 300 LAKCHMFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKAGHLSEASQVFQVEMPMNGVPR 359
Query: 512 RLV 514
L
Sbjct: 360 SLA 362
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 92/224 (41%), Gaps = 6/224 (2%)
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK-GMSSYNCEPN 371
R G + D ++ + G P +N + ++S + D+ + ++ SS N +
Sbjct: 60 ARNGSVQDLVQSLG-IGCPGIQPTSNIVDGLLSKF--GDDWKSALGLFQWAQSSGNYKHT 116
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+R+I L K R++ ++ +M RG+V TS + L A++++
Sbjct: 117 AYACSRMIDLLGKMRQIDQMWDLLSDMHCRGLVTVEAAATS-IRRLAGARRWKDAVLLFD 175
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
K +G + + +LL L K + ++ + P D + + G C+
Sbjct: 176 KLGDMGLERNTETMNVLLDALCKEKKVEVARKVFLVLSPHIQP-DAYTFNIFVHGWCSAR 234
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+++ A+ +EE +GF PS + Y+ + + Y +
Sbjct: 235 RIDEAMWTIEEMKAQGFPPSVITYTTVLEAYCKQHNFRMVYEIL 278
>gi|255661030|gb|ACU25684.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 376
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 172/363 (47%), Gaps = 37/363 (10%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V +MA+ V+PD + +++ F RAG++ I+ L L + S N+++ L
Sbjct: 12 VYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIE-LWELMGREXSQNVVSFNIMMRGLF 70
Query: 245 QRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
V A S++ M + + + TY I++ G+ K G + + RVL+ +G D+
Sbjct: 71 GNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIAEEKGGVLDAF 130
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
+S +I GL + ++D+A+ V + M + G P+ + YN +I+ ++ V FD+ ++ ++ M
Sbjct: 131 AYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVFREM 190
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT-------------- 409
S NC P + TY LI+GL K + A+A ++ +EML++G P T
Sbjct: 191 GSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKV 250
Query: 410 ----------ITSFLEP-----------LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
I++ L+P LCS G A+M+Y + C +L + L
Sbjct: 251 EMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTL 310
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ G L +W + +G D Y + GLC+ ++ A+L ++++L K
Sbjct: 311 MEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKI 370
Query: 509 CPS 511
PS
Sbjct: 371 APS 373
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 145/318 (45%), Gaps = 36/318 (11%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
W + +++V S+N++++ L D ++ M + G D T I++D F +
Sbjct: 48 WELMGREXSQNVVSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKN 107
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG---------- 261
G + K++++L E+ G DA + + ++ LC+ + A S+ N M
Sbjct: 108 GYINKSLRVLEIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVY 167
Query: 262 KVLFN--------------------------VMTYNIVISGWSKLGQVVEMERVLKEIVA 295
L N V+TYN +I+G K + E ++KE++
Sbjct: 168 NTLINGFMGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLE 227
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+G+ P +T+S L++GL + +++ A+++++ + G PD N +I SVG
Sbjct: 228 KGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQL 287
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+ Y M+ +NC PN+ T+ L+ G K + +AL ++ +L G+ P + L+
Sbjct: 288 ALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLK 347
Query: 416 PLCSYGPPHAAMMMYKKA 433
LCS A++ + A
Sbjct: 348 GLCSCSRISFAILFLQDA 365
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 116/258 (44%), Gaps = 1/258 (0%)
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + ERV KE+ SPD++ ++ ++ G RAGRI D IE+++ M + + ++
Sbjct: 4 GDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGREX-SQNVVSF 62
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N ++ GD D+ + ++ M+ + TY L+ G K+ + +L V E +
Sbjct: 63 NIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIAEE 122
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G V ++ + LC A+ + K G + Y L+ G K
Sbjct: 123 KGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFDD 182
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ ++ EM + Y +I GLC + A +++E L KG+ P + YS L
Sbjct: 183 AIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMK 242
Query: 521 KLLASNKLESAYNLFRKI 538
L +K+E A L+ ++
Sbjct: 243 GLCQGHKVEMALQLWNQV 260
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 103/225 (45%), Gaps = 1/225 (0%)
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+G ID A V+ M E PD YNA+++ + G +C++ ++ M + N+
Sbjct: 2 ESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGREXSQ-NVV 60
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
++ ++ GL + V A+ ++E M G V + T ++ C G + ++ + + A
Sbjct: 61 SFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIA 120
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
+ G L AY ++ L K + + + M ++G + +Y +I G + +
Sbjct: 121 EEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKF 180
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++A+ V E P+ + Y+ L N L + AY+L +++
Sbjct: 181 DDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEM 225
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 187/434 (43%), Gaps = 39/434 (8%)
Query: 142 SGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
+G+A LF + V DV +YN+I+ AL + + D VL M G PD T
Sbjct: 281 TGKACSLFHE--MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTY 338
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+ ++ + G++ +A +M +++ GL + N L LC+ A+ +F+SM
Sbjct: 339 NCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTA 398
Query: 262 K--------------------------VLFNVM----------TYNIVISGWSKLGQVVE 285
K LFN M +NI+I ++K G V +
Sbjct: 399 KGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDD 458
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+ E+ +G SPD +T+S +I R GR+ DA+E F+ M +G P+T Y+++I
Sbjct: 459 AMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQ 518
Query: 346 NYISVGDFDECMKYYKGMSSYNC-EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ G + + M + P++ + +I+ L K +V DA ++F+ + D G
Sbjct: 519 GFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGER 578
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P T TS ++ C G A + VG + + Y LL G+ L L
Sbjct: 579 PDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTL 638
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+ EMQ G + Y ++AGL G+ A E + G + +Y + L
Sbjct: 639 FREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCR 698
Query: 525 SNKLESAYNLFRKI 538
+N + A LF+K+
Sbjct: 699 NNCADEAIILFQKL 712
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 192/415 (46%), Gaps = 2/415 (0%)
Query: 127 LSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVL 186
S ++ K + ++S A+ LF A + + +V +YN ++ + C++
Sbjct: 229 FSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLF 288
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
+M ++GV PD+ T ++++D+ +A + KA +L ++ G + D + N ++
Sbjct: 289 HEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATL 348
Query: 247 LHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
+ A+ +F MK + L N++ N ++ K G+ E + + A+G PD +++
Sbjct: 349 GRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSY 408
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
L+ G G D I +F++MK G D +N +I Y G D+ M + M
Sbjct: 409 CTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQ 468
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
P++ TY+ +IS + ++ DA+E F +M+ RGI P+T S ++ C +G
Sbjct: 469 QGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVK 528
Query: 426 AMMMYKKARKVGC-KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A + + G + + + ++ L G+ D++ + + G D + +I
Sbjct: 529 AKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLI 588
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G C +G+++ A +++ G + YS L + + ++ LFR+++
Sbjct: 589 DGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQ 643
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 186/395 (47%), Gaps = 3/395 (0%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
M+ FN ++K +A D + +N+++ A +R D + ++M ++GV+PD+ T S V+
Sbjct: 424 MIGLFN-SMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVI 482
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKV 263
+F R G++ A++ ++ G++ + + ++ C + A L + M KG
Sbjct: 483 SAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIP 542
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+++ +N VI+ K G+V++ + + G PD +TF+ LI+G G++D A +
Sbjct: 543 RPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFK 602
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+ D M+ G D Y+ ++ Y G ++ + ++ M +PN TY +++GL
Sbjct: 603 ILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLF 662
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
++ + A + F EM++ G + L LC A+++++K + K S+T
Sbjct: 663 RAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSIT 722
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
++ + + +L+ + SG + Y +I L G +E+A +
Sbjct: 723 ILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSM 782
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ G P + +++ LL ++ A N K+
Sbjct: 783 EKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKV 817
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 171/388 (44%), Gaps = 15/388 (3%)
Query: 143 GEAMVL-FFNWAIKH---PNVAK-DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
G A+ L FN + P V V +Y++++ R + D + + + G+
Sbjct: 132 GPALALALFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIH 191
Query: 198 LETLSIVMDSFIRAGQVYKAIQ-MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
T S ++ A + +A+ +L R+ + G + S +++L LC A LF
Sbjct: 192 QITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLF 251
Query: 257 NSMK---GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
M G NV+ YN VI G+ K G+ + + E+ +G PD +T++ +I+ L
Sbjct: 252 QMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALC 311
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+A +D A V M G PDT YN +I Y ++G E K ++ M S PN+
Sbjct: 312 KARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIV 371
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
++ L K + +A E+F+ M +G P + + L S G + ++
Sbjct: 372 ICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSM 431
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNI 490
+ G + +L+ + K GM+ D ++ EMQ+ G D Y VI+ +
Sbjct: 432 KSNGIAADCRVFNILIH---AYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRM 488
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKL 518
G+L +A+ + + +G P+ VY +
Sbjct: 489 GRLTDAMEKFNQMVARGIQPNTAVYHSI 516
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 173/383 (45%), Gaps = 4/383 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG--VNPDLETLSIVMDSFIRAGQVYKAIQ 219
+V SY++I+K L ++ MAKEG +P++ + V+ F + G+ KA
Sbjct: 227 NVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACS 286
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
+ + G+K D + N+++ LC+ + A + M + +TYN +I G++
Sbjct: 287 LFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYA 346
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
LG++ E ++ +++ + G P+ + + + L + GR +A E+FD+M KG PD
Sbjct: 347 TLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIV 406
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
+Y ++ Y S G F + + + M S + + LI K V DA+ +F EM
Sbjct: 407 SYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEM 466
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+G+ P T ++ + G AM + + G + + Y +++ G
Sbjct: 467 QQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGL 526
Query: 459 GMLLDLWHEMQESGYP-SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+L EM G P D + VI LC G++ +A + + G P + ++
Sbjct: 527 VKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTS 586
Query: 518 LSNKLLASNKLESAYNLFRKIKI 540
L + K++ A+ + +++
Sbjct: 587 LIDGYCLVGKMDKAFKILDAMEV 609
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 160/363 (44%), Gaps = 6/363 (1%)
Query: 185 VLSDMAKEGVNP-DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
V + A V P + T SI+MD RA + + + G + GLK + + +L CL
Sbjct: 143 VCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCL 202
Query: 244 C--QRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG--FS 299
C R L + + NV +Y+I++ G + + + EG S
Sbjct: 203 CYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACS 262
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P+ + ++ +I G + G A +F M +G PD YN +I D+
Sbjct: 263 PNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELV 322
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ M++ +P+ TY +I G ++ +A ++F +M RG++P+ SFL LC
Sbjct: 323 LRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCK 382
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
+G A ++ G K + +Y LL + G ++ L++ M+ +G +D +
Sbjct: 383 HGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRV 442
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ +I G +++A+L+ E ++G P + YS + + +L A F ++
Sbjct: 443 FNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQM- 501
Query: 540 IAR 542
+AR
Sbjct: 502 VAR 504
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 164/356 (46%), Gaps = 6/356 (1%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI---QMLGRLEDFGLKFDAESLNVVLW 241
+L M++ G P++ + SI++ +A+ QM+ + E + + N V+
Sbjct: 215 LLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAK-EGGACSPNVVAYNTVIH 273
Query: 242 CLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
+ G A SLF+ M + V +V+TYN++I K + + E VL+++ G P
Sbjct: 274 GFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQP 333
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
D++T++ +I G GR+ +A ++F MK +G P+ N+ +++ G E + +
Sbjct: 334 DTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIF 393
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
M++ +P++ +Y L+ G AD + +F M GI +
Sbjct: 394 DSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKR 453
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
G AM+++ + ++ G + Y ++ S G+ ++ +++M G + +Y
Sbjct: 454 GMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVY 513
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRLVYSKLSNKLLASNKLESAYNLF 535
+I G C G L A ++ E + KG P + ++ + N L ++ A+++F
Sbjct: 514 HSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIF 569
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 162/380 (42%), Gaps = 42/380 (11%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ +V SYN I+ R+ + C V +M G P+ T +I+MD + + G + A
Sbjct: 398 ISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAF 457
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+ R++D + +L +++ LC+ LFN + + M YN +I G+
Sbjct: 458 SIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGF 517
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G + V +E+ G +P ++T++ LI+G + ID A+++ + MK KG D
Sbjct: 518 IKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDI 577
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
AY +I + D + + PN Y +I+G V +A++++++
Sbjct: 578 KAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKK 637
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M++ GI T TS ++ G K
Sbjct: 638 MVNEGIPCDLKTYTSLID--------------------------------------GLLK 659
Query: 458 CGMLL---DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G LL D+ EM G D + +I GLCN GQ ENA ++E+ K PS L+
Sbjct: 660 SGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLI 719
Query: 515 YSKLSNKLLASNKLESAYNL 534
Y+ L L+ A+ L
Sbjct: 720 YNTLIAGHFKEGNLQEAFRL 739
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 171/356 (48%), Gaps = 4/356 (1%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVL--WC 242
+++++++ G+ P+ T S+++D + G + KA + ++ G++ SLN +L +
Sbjct: 285 LVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYL 344
Query: 243 LCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
CQ A ++FN L NV T+N ++S K G++ E + E++A+G SP+
Sbjct: 345 KCQSWQ--NAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNV 402
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
++++ +I G R I+ A +V+ M + G P+ + ++ Y GD + +
Sbjct: 403 VSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHR 462
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M N P T +I GL K+ + + ++F + + +G VP+ + ++ G
Sbjct: 463 MKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGN 522
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
+ A +Y++ +VG S Y L+ + L L ++M+ G D + Y
Sbjct: 523 INLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGT 582
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+I G C +++A ++ E G P+R +Y+ + N +E A +L++K+
Sbjct: 583 LIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKM 638
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 151/307 (49%), Gaps = 12/307 (3%)
Query: 113 KGVIEDA------LWNVNV---DLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDV 163
KG IE+A + + N+ D +L ++ K + + S E LF + +
Sbjct: 450 KGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQ--GFVPTC 507
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
YN I+ + + NV +M + G+ P T + ++D F + + A+++L
Sbjct: 508 MPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLND 567
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQ 282
++ GLK D ++ ++ C+R + +A L N ++G L N YN +I+G+ +
Sbjct: 568 MKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNN 627
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V E + K++V EG D T++ LI+GL ++GR+ A ++ M KG PD A+
Sbjct: 628 VEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTV 687
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I+ + G F+ K + M+ N P++ Y LI+G K + +A + +EMLDRG
Sbjct: 688 LINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRG 747
Query: 403 IVPSTGT 409
+VP T
Sbjct: 748 LVPDNIT 754
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/486 (23%), Positives = 203/486 (41%), Gaps = 49/486 (10%)
Query: 98 PEERLRGVFLQKLKGKGVIE-----DALWNVNVDLSLDVVGKVVN----RGNLSGEAMVL 148
PE V +K V E D + N ++L V ++ +GNL A+VL
Sbjct: 227 PEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLR-SALVL 285
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
I + + +Y+V++ + + S+M +G+ + +L+ +++ +
Sbjct: 286 V--NEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGY 343
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNV 267
++ A M + GL + + N +L LC+ + A +L++ + K + NV
Sbjct: 344 LKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNV 402
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
++YN +I G + + +V KE++ GF+P+++TF+ L++G + G I++A +F
Sbjct: 403 VSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHR 462
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
MK+ P +I G E + S P Y +I G +K
Sbjct: 463 MKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGN 522
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ A V+ EM + GI PST T TS ++ C A+ + ++ G K+ + AY
Sbjct: 523 INLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGT 582
Query: 448 LL-----RR---------------------------LSGFGKCGML---LDLWHEMQESG 472
L+ RR ++GF + +DL+ +M G
Sbjct: 583 LIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEG 642
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
P D + Y +I GL G+L A + E L KG P ++ L N L + E+A
Sbjct: 643 IPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENAR 702
Query: 533 NLFRKI 538
+ +
Sbjct: 703 KILEDM 708
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 157/355 (44%), Gaps = 2/355 (0%)
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
DM G + +L + +M + G + A+ ++ + + GL + + +V++ C+
Sbjct: 253 DMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNG 312
Query: 248 HVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
++ A ++ MK K + +V + N ++ G+ K + + + G + + TF+
Sbjct: 313 NIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFN 371
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
L+ L + G++++A ++D + KG P+ +YN +I + + + K YK M
Sbjct: 372 TLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDN 431
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
PN T+T L+ G K + +A +F M D I+P+ T+ ++ LC G
Sbjct: 432 GFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEG 491
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
++ K G + Y ++ G + +++ EM E G Y +I G
Sbjct: 492 RDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDG 551
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
C ++ A+ ++ + RKG Y L + ++SA+ L +++ A
Sbjct: 552 FCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGA 606
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 136/333 (40%), Gaps = 35/333 (10%)
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM 268
I+ G + +A Q + + G++ D E+ ++ + LC + + G A SL
Sbjct: 169 IQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSL------------- 215
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
L+E+ A G+ P TF+ +I + G + +A+ + D M
Sbjct: 216 ---------------------LREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDM 254
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
G + +++ Y G+ + +S PN TY+ LI G K+ +
Sbjct: 255 VNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNI 314
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A E + EM +GI S ++ S LE A M+ A + G T + L
Sbjct: 315 EKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFT-FNTL 373
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L L GK +LW E+ G + Y +I G C + A V +E L GF
Sbjct: 374 LSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGF 433
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
P+ + ++ L + +E+A+++F ++K A
Sbjct: 434 TPNAVTFTILMDGYFKKGDIENAFSIFHRMKDA 466
>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 827
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 188/402 (46%), Gaps = 6/402 (1%)
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRR-KFFDFMCNVLSDMAKEGVNPD 197
GN+ A++L N + + N + S+N ++ +R + F+ + VL +M G+ PD
Sbjct: 370 GNVEA-ALMLIRN--LHYTNQPLNSHSFNDVIYGFCKRGEVFEAL-QVLEEMKSSGILPD 425
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ + SI++++F G V K + ++ +E +K S ++ LC++ + A +F+
Sbjct: 426 VYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFH 485
Query: 258 SMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
S+ ++ Y +I G+ G + ++L+E++ P + + LI G + G
Sbjct: 486 SIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLG 545
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
D A+EVF+ M G PDT A N ++ G F E + + + N +Y
Sbjct: 546 LFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYN 605
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+I L K ALE+ ML R ++PS ++ + A+ ++ + KV
Sbjct: 606 AIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKV 665
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G ++ Y +L+ S K ++ EM+E G D Y +I G CN +++ A
Sbjct: 666 GITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKA 725
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ EE R+G P+ + Y+ + + SN+++ A +F K+
Sbjct: 726 WALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKM 767
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 189/451 (41%), Gaps = 42/451 (9%)
Query: 129 LDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSD 188
DV+ V ++ A+ +F N KH + D+++ N ++K L +F+ V +
Sbjct: 250 FDVLISVFASNSMLENALDVFSN--AKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEE 307
Query: 189 MAKEGVNPDLETLSIVMDSFI--------------------------------------- 209
+ G +P++ T +I+M+ +
Sbjct: 308 LKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLC 367
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVM 268
+ G V A+ ++ L ++ S N V++ C+R V A + MK +L +V
Sbjct: 368 KVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVY 427
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
+Y+I+I+ + G V++ +++E+ P ++++ LI GL + + +A+++F ++
Sbjct: 428 SYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSI 487
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
C D+ Y +I + GD D +K + M P + LI G K
Sbjct: 488 GASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLF 547
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
ALEVF ML GI P T L+ C G A+ + + ++ G L+ +Y +
Sbjct: 548 DQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAI 607
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ +L G L+L M + Y +I+G + AV + ++ G
Sbjct: 608 IYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGI 667
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ Y+ L + S+K+ AY +F+++K
Sbjct: 668 TFNIATYTILMSIFSHSHKMHEAYGIFKEMK 698
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 128/270 (47%), Gaps = 1/270 (0%)
Query: 169 IVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
+++ + FD V + M ++G+ PD + ++D RAG +A+ +L ++ G
Sbjct: 537 LIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHG 596
Query: 229 LKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEME 287
+ S N +++ LC+ + A L M K VL +V+ Y+ +ISG++K
Sbjct: 597 FNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAV 656
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
+ +V G + + T++ L+ + ++ +A +F MKE+G D +Y +I +
Sbjct: 657 NLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGF 716
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
+ + + ++ MS C PN+ TYT +I G KS ++ A VF++M ++P
Sbjct: 717 CNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDV 776
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
T T ++ +G A +Y + G
Sbjct: 777 VTYTVLIDWYHKHGYFDQAHKLYDVMKDKG 806
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 111/279 (39%), Gaps = 21/279 (7%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
++ + I++ ++ G +E+ +L++IV TF L ++ + VF
Sbjct: 191 SISCFRIIVHAFALAGMRLEVWALLRDIVGFCNEAKYDTFELFSAFLDSPQHVERSGVVF 250
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D + IS + S + + + EP++ T L+ L+++
Sbjct: 251 DVL---------------ISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEA 295
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS-----YGPPHAAMMMYKKARKVGCKL 440
+V VFEE+ DRG P+ T T + CS G AA+++ K R G K
Sbjct: 296 NRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRS-GEKP 354
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
++ Y + L G L L + + P + + VI G C G++ A+ V+
Sbjct: 355 TVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVL 414
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
EE G P YS L N + +L +++
Sbjct: 415 EEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEME 453
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 172/365 (47%), Gaps = 14/365 (3%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI-QM 220
DV SY ++ A + NV M +EG P L T +++++ F + G + I +
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQR--LHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
+ +++ G+ DA + N ++ C C+R LH AA +F MK + +TYN ++ +
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITC-CKRGSLHQEAAQ-VFEEMKAAGFSHDKVTYNALLDVY 324
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K + E +VL E+ GFSP +T++ LI R G +D+A+E+ + M EKG PD
Sbjct: 325 GKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y ++S + G + M ++ M + C+PN+ T+ I K D +++F+E
Sbjct: 385 FTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDE 444
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ G+ P T + L G ++K+ ++ G + L +S + +
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL---ISAYSR 501
Query: 458 CG---MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRL 513
CG + ++ M ++G D Y V+A L G E + V+ E + G C P+ L
Sbjct: 502 CGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAE-MEDGRCKPNEL 560
Query: 514 VYSKL 518
Y L
Sbjct: 561 TYCSL 565
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 192/403 (47%), Gaps = 16/403 (3%)
Query: 150 FNWAIKHPNVAK--DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
F+W +K + D +++ LG+ N+ + + ++G + D+ + + ++ +
Sbjct: 158 FDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISA 217
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA----SSLFNSMKGK- 262
F +G+ +A+ + ++E+ G K + NV+L + +G +SL MK
Sbjct: 218 FANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGK---MGTPWNKITSLVEKMKSDG 274
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ + TYN +I+ + E +V +E+ A GFS D +T++ L++ G++ R +A+
Sbjct: 275 IAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAM 334
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+V + M+ G P YN++IS Y G DE M+ M+ +P++ TYT L+SG
Sbjct: 335 KVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
++ KV A+ +FEEM + G P+ T +F++ + G M ++ + G +
Sbjct: 395 ERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDI 454
Query: 443 TAYKLLLRRLSGFGKCGM---LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+ L L+ FG+ GM + ++ EM+ +G+ + E + +I+ G E A+ V
Sbjct: 455 VTWNTL---LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTV 511
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
L G P Y+ + L E + + +++ R
Sbjct: 512 YRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 131/293 (44%), Gaps = 1/293 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K + +++N ++ A R F+ V M GV PDL T + V+ + R G
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
++ ++L +ED K + + +L +G SL + G + +
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
++ SK + E ER E+ GFSPD T + ++ GR + A EV D MKE+G
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERG 659
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P YN+++ + DF + + + + + +P++ +Y +I ++ ++ DA
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDAS 719
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+F EM D GIVP T +F+ + A+ + + K GC+ + Y
Sbjct: 720 RIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTY 772
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 111/503 (22%), Positives = 195/503 (38%), Gaps = 94/503 (18%)
Query: 107 LQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSY 166
+++K G D V + LDV GK + EAM + + + + +Y
Sbjct: 302 FEEMKAAGFSHD---KVTYNALLDVYGK----SHRPKEAMKVLNEMELN--GFSPSIVTY 352
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
N ++ A R D + + MA++G PD+ T + ++ F RAG+V A+ + + +
Sbjct: 353 NSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRN 412
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVE 285
G K + + N + R +F+ + L +++T+N +++ + + G E
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+ V KE+ GF P+ TF+ LI R G + A+ V+ M + G PD + YN V++
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA 532
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI--------------------SGLLKS 385
G +++ K M C+PN TY L+ SG+++
Sbjct: 533 ALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEP 592
Query: 386 RKV---------------ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
R V +A F E+ +RG P T+ S + YG M
Sbjct: 593 RAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVS---IYG----RRQMV 645
Query: 431 KKARKV-------GCKLSLTAYKLLL---RRLSGFGKCGMLLD----------------- 463
KA +V G S+ Y L+ R + FGK +L
Sbjct: 646 GKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTV 705
Query: 464 ---------------LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
++ EM++SG D Y I E A+ V+ ++ G
Sbjct: 706 IYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGC 765
Query: 509 CPSRLVYSKLSNKLLASNKLESA 531
P++ Y+ + + N+ + A
Sbjct: 766 RPNQNTYNSIVDGYCKLNRKDEA 788
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 121/276 (43%), Gaps = 36/276 (13%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR-------- 210
V D+ +YN ++ AL R ++ VL++M P+ T ++ ++
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH 579
Query: 211 --AGQVYKAI-------------------------QMLGRLEDFGLKFDAESLNVVLWCL 243
A +VY + + L++ G D +LN ++
Sbjct: 580 SLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIY 639
Query: 244 CQRLHVGAASSLFNSMKGKVLFNVM-TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
+R VG A+ + + MK + M TYN ++ S+ + E +L+EI+A+G PD
Sbjct: 640 GRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDI 699
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
++++ +I R R+ DA +F M++ G PD YN I +Y + F+E + +
Sbjct: 700 ISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRY 759
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
M + C PN +TY ++ G K + +A E++
Sbjct: 760 MIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 124/324 (38%), Gaps = 59/324 (18%)
Query: 277 WSKLGQVVEMERVLKEIVAEGFS------------------PDSLTFSFL--IEGLGRAG 316
WS G + ++VL+ ++ F P+S + L ++GLG
Sbjct: 90 WSYHGLSPQGQQVLRSLIEPNFDSGQLDALLSELFEPFKDKPESTSSELLAFLKGLGFHK 149
Query: 317 RIDDAIEVFD-TMKEKGCGP--DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+ D A+ FD MK+K D + VIS G + G+ ++
Sbjct: 150 KFDLALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVY 209
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT-----------------ITSFLEP 416
+YT LIS S + +A+ VF++M + G P+ T ITS +E
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 417 L------------------CSYGPPHA-AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ C G H A ++++ + G Y LL +
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHR 329
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+ + +EM+ +G+ Y +I+ G L+ A+ + + KG P Y+
Sbjct: 330 PKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 518 LSNKLLASNKLESAYNLFRKIKIA 541
L + + K+ESA N+F +++ A
Sbjct: 390 LLSGFERAGKVESAMNIFEEMRNA 413
>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 159/326 (48%), Gaps = 1/326 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +Y +++ G D + + +M ++G+ D+ ++V++ + G +A +
Sbjct: 1 VATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFD 60
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLG 281
L + GL + + ++ +C+ + AA L N M+ + L N + YN +I G+ K G
Sbjct: 61 ELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRG 120
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ E +V + +GF D T + + +GL + + ++A TM EKG P+ +Y
Sbjct: 121 LIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYT 180
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I Y G+F E K ++ M EPN TY LI G K ++ +A E+ +EM +
Sbjct: 181 TLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAK 240
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
GI P T TS L C +G A+ ++ + R+ G L++ Y ++ LS G+
Sbjct: 241 GIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEA 300
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGL 487
L+ EM E+G D +Y +++ L
Sbjct: 301 FKLYDEMTEAGLTPDDRVYTSLVSSL 326
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 149/324 (45%), Gaps = 1/324 (0%)
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
T ++++D +G++ + +M + + G+K D VV+ C+ + A +LF+ +
Sbjct: 3 TYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDEL 62
Query: 260 KGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
K L NV TY +I G K G++ E ++ E+ G + L ++ LI+G + G I
Sbjct: 63 TEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLI 122
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
D+A +V M++KG D N + + +E ++ M PN+ +YT L
Sbjct: 123 DEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTL 182
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I K +A ++F+EM G P+ T ++ G A + + R G
Sbjct: 183 IDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGI 242
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ Y LL FGK ++L++E+++ G P + Y +I+GL G+ E A
Sbjct: 243 FPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFK 302
Query: 499 VMEESLRKGFCPSRLVYSKLSNKL 522
+ +E G P VY+ L + L
Sbjct: 303 LYDEMTEAGLTPDDRVYTSLVSSL 326
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 111/223 (49%), Gaps = 5/223 (2%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN ++ +R D V M K+G D+ TL+ + D + Q +A + L +
Sbjct: 109 YNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMI 168
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK---GKVLFNVMTYNIVISGWSKLGQ 282
+ G+ + S ++ C+ + A LF MK G+ N +TYN++I G SK G+
Sbjct: 169 EKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEP--NAVTYNVLIDGHSKKGR 226
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ E + E+ A+G PD T++ L+ G G++DDA+E+F+ +++KG + Y A
Sbjct: 227 MKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTA 286
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+IS G +E K Y M+ P+ YT L+S L K+
Sbjct: 287 IISGLSKEGRSEEAFKLYDEMTEAGLTPDDRVYTSLVSSLHKA 329
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 130/276 (47%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
++ Y +VI+ K+G + E+ +G + T+ LI+G+ +AG ++ A +
Sbjct: 35 DIHVYTVVINWNCKIGNTKRAFALFDELTEKGLVANVHTYGALIDGVCKAGEMEAAEILV 94
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ M+ +G + YN +I Y G DE K M E ++ T + GL K
Sbjct: 95 NEMQTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKL 154
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+ +A M+++G+VP+ + T+ ++ C G A ++++ +K G + + Y
Sbjct: 155 NQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTY 214
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+L+ S G+ +L EM+ G D Y ++ G C G+L++AV + E +
Sbjct: 215 NVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQ 274
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
KG + + Y+ + + L + E A+ L+ ++ A
Sbjct: 275 KGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEA 310
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 113/273 (41%)
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V TY ++I G++ E+ER+ +E+ +G D ++ +I + G A +FD
Sbjct: 1 VATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFD 60
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
+ EKG + + Y A+I G+ + M + + N Y LI G K
Sbjct: 61 ELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRG 120
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+ +A +V M +G T+ + + L P A + G ++ +Y
Sbjct: 121 LIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYT 180
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+ G L+ EM+++G + Y +I G G+++ A + +E K
Sbjct: 181 TLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAK 240
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G P Y+ L + KL+ A LF +++
Sbjct: 241 GIFPDIYTYTSLLHGECIFGKLDDAVELFNEVR 273
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 93/206 (45%), Gaps = 6/206 (2%)
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
Y +I + S G DE + ++ M + ++ YT +I+ K A +F+E+
Sbjct: 3 TYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDEL 62
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
++G+V + T + ++ +C G AA ++ + + G ++ Y L+ G+ K
Sbjct: 63 TEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLI---DGYCKR 119
Query: 459 GMLLDLWHE---MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
G++ + + M++ G+ +D + GL + Q E A + + KG P+ + Y
Sbjct: 120 GLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSY 179
Query: 516 SKLSNKLLASNKLESAYNLFRKIKIA 541
+ L + A LF+++K A
Sbjct: 180 TTLIDIYCKEGNFVEAKKLFQEMKKA 205
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 175/387 (45%), Gaps = 41/387 (10%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K + +V +YNV++KAL + D C +L +M+ +G +PD + + V+ S + G
Sbjct: 170 MKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGD 229
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
V KA ++ + E N ++ +C+ A L N M + V NV++Y+
Sbjct: 230 VDKARELAMKFEPV-----VPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYST 284
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
VIS S +G V V + G P+ TF+ LI+G GR+ DA+ +++ M +G
Sbjct: 285 VISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREG 344
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ AYN +I S G+ DE + + M + PN+ TY+ +I G KS + A
Sbjct: 345 VSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSAC 404
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
E + +M++ G P+ T ++ LC M M+ +A
Sbjct: 405 ETWNKMINCGCRPNVVVYTCMVDVLCQ-------MSMFDQA------------------- 438
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
DL M G P + I GLC G++E A+ V+++ + P+
Sbjct: 439 ---------FDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNI 489
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKIK 539
Y++L + L +N A L R+++
Sbjct: 490 RTYNELLDGLFRANAFREACGLIRELE 516
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 150/340 (44%), Gaps = 1/340 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V YN ++ + + F +++++M GV+P++ + S V+ G V ++ + G
Sbjct: 244 VPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFG 303
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLG 281
R+ G + + ++ ++ R VG A L+N M + V NV+ YN +I G G
Sbjct: 304 RMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDG 363
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ E V ++ + P+ T+S +I G ++G + A E ++ M GC P+ Y
Sbjct: 364 NMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYT 423
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++ + FD+ M S C P + T+ I GL ++ +V A+ V ++M
Sbjct: 424 CMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKY 483
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
+P+ T L+ L A + ++ + + Y ++ S G +
Sbjct: 484 ECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQV 543
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
L L +M +G D + C +G+++ A+ V++
Sbjct: 544 LQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLD 583
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 145/358 (40%), Gaps = 61/358 (17%)
Query: 124 NVDLSLDVVGKVVNRG---NLS---------------GEAMVLFFNWAIKHPNVAKDVKS 165
NV+LSL V G++ RG N+ G+A+ L+ N I+ V+ +V +
Sbjct: 294 NVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLW-NLMIRE-GVSPNVVA 351
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN ++ L D +V + M K+ + P++ T S ++ F ++G + A + ++
Sbjct: 352 YNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMI 411
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVV 284
+ G + + ++ LCQ A L ++M V+T+N I G + G+V
Sbjct: 412 NCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVE 471
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK------------- 331
VL ++ P+ T++ L++GL RA +A + ++E+
Sbjct: 472 WAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIM 531
Query: 332 ----------------------GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS-YNC 368
G DT N ++ Y +G +K +S+
Sbjct: 532 YGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEF 591
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT----ITSFLEPLCSYGP 422
++ T+T ++ G+ +A+ EML RGI P+ T + F L GP
Sbjct: 592 RADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFSKLGHMGP 649
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 9/170 (5%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
++++YN ++ L R F C ++ ++ + V D T + +M F G + +Q+L
Sbjct: 488 NIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLL 547
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--NVMTYNIVISGWSK 279
G++ G+K D ++N + C+ V A + +++ + F +++T+ I++ G
Sbjct: 548 GKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICN 607
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG----LGRAGRI---DDAI 322
E L E++ G P+ T++ L+ G LG G I DD I
Sbjct: 608 WLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFSKLGHMGPIRILDDII 657
>gi|259490098|ref|NP_001159276.1| uncharacterized protein LOC100304366 [Zea mays]
gi|223943161|gb|ACN25664.1| unknown [Zea mays]
gi|414590092|tpg|DAA40663.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
gi|414590093|tpg|DAA40664.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
Length = 535
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 171/353 (48%), Gaps = 4/353 (1%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y ++ L + + F ++L +M + V + + + ++RA +A + R+E
Sbjct: 138 YASMIVLLAKHRHFGLARHLLDEMRERAVPISRQLILALTRRYVRAEMPSEAADLFRRME 197
Query: 226 DFGL-KFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVV 284
++G D +L +L L ++ A +LF+S + +V+ Y V+ W + G++
Sbjct: 198 EYGAGAPDPATLASLLAALSKKRLASEAQALFDSCRTVFTPDVVLYTAVVHAWCRAGRLD 257
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E ERV E+ G P+ T++ +I+ + RAG++ A E+ M + GC P+T +NA++
Sbjct: 258 EAERVFTEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTTTFNAIM 317
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI-SGLLKSRKVAD-ALEVFEEMLDRG 402
+++ G ++ ++ + M CEP++ TY LI + K + D AL+V ++M +
Sbjct: 318 RSHVKAGRSEQVLQVHNQMQQLRCEPDVITYNFLIETHCGKGQGNLDAALKVLDKMTAKK 377
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
VP T L G AA +Y+K R++ CK ++ Y LLR + M+L
Sbjct: 378 CVPDCHTFNPMFRLLLVLGNIGAAHKLYEKMRELQCKPNVVTYNCLLRLFNKEKSMDMVL 437
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL-RKGFCPSRLV 514
+ +M G + Y +I C G + A ++E + K F PS+ V
Sbjct: 438 RMKKDMDAEGIEPNMHTYAALIEAFCGRGNWKRAHTTLKEMIEEKSFKPSKQV 490
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 41/287 (14%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
+ L+ EA LF + DV Y +V A R D V ++M + G+ P+
Sbjct: 218 KKRLASEAQALFDSCRTV---FTPDVVLYTAVVHAWCRAGRLDEAERVFTEMQQSGIMPN 274
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ T + V+D+ RAGQV +A ++L ++ D G + + N ++ R HV A S
Sbjct: 275 VYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTTTFNAIM-----RSHVKAGRS--- 326
Query: 258 SMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE---GLGR 314
QV+++ ++++ E PD +T++FLIE G G+
Sbjct: 327 -----------------------EQVLQVHNQMQQLRCE---PDVITYNFLIETHCGKGQ 360
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G +D A++V D M K C PD + +N + + +G+ K Y+ M C+PN+ T
Sbjct: 361 -GNLDAALKVLDKMTAKKCVPDCHTFNPMFRLLLVLGNIGAAHKLYEKMRELQCKPNVVT 419
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
Y L+ K + + L + ++M GI P+ T + +E C G
Sbjct: 420 YNCLLRLFNKEKSMDMVLRMKKDMDAEGIEPNMHTYAALIEAFCGRG 466
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 195/428 (45%), Gaps = 11/428 (2%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
F ++K G++ D D++ + V+ + N EA+ +F ++ +
Sbjct: 153 FFHEMKANGLVPD-------DVTYTSMMGVLCKANRLDEAVEIF--EQMEQNRQVPCAYA 203
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN ++ G FD ++L +G P + + ++ + G+ KA+++ ++
Sbjct: 204 YNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMK 263
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVV 284
+ + + N+++ LC+ +V AA + ++MK LF NV T NI+I K ++
Sbjct: 264 RDAMP-NLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLD 322
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E + + + + SPD TF LI+GLG+ GR+DDA +++ M + P+ Y ++I
Sbjct: 323 EACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLI 382
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
N+ ++ K YK M C P++ + + K+ + +FEE+ RG +
Sbjct: 383 RNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFL 442
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P T + + + L G +Y + GC L AY ++ GK L
Sbjct: 443 PDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 502
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
EM+ G+ Y V+ GL I +L+ A ++ EE+ G ++++YS L +
Sbjct: 503 LEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGK 562
Query: 525 SNKLESAY 532
+++ AY
Sbjct: 563 VGRVDEAY 570
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 124/519 (23%), Positives = 220/519 (42%), Gaps = 53/519 (10%)
Query: 56 LKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGV 115
L E DL Q+ H F + S I + V E +R+ +F Q
Sbjct: 42 LIEAFDLLQMMRHFKFRPAF----SAYTTLIGALSEVGE----SDRMLALFNQ------- 86
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+++ + VNV L L + +V +R A+ L +K D+ YNV + G+
Sbjct: 87 MQELGYEVNVHL-LTTLIRVFSREGRVDAALSLLDE--MKSNTFDADIVLYNVCIDCFGK 143
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED--------- 226
D +M G+ PD T + +M +A ++ +A+++ ++E
Sbjct: 144 VGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYA 203
Query: 227 -------FGL--KFD-AESL----------------NVVLWCLCQRLHVGAASSLFNSMK 260
+G KFD A SL N +L CL ++ A +F MK
Sbjct: 204 YNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMK 263
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
+ N+ TYNI+I K G V +V + G P+ T + +I+ L +A ++D+
Sbjct: 264 RDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDE 323
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A +F+ M K C PD + ++I G D+ + Y+ M + PN+ YT LI
Sbjct: 324 ACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIR 383
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
K + D ++++EM+ G P + ++++ + G ++++ + G
Sbjct: 384 NFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLP 443
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+Y +L+ L G +L++ M++ G D Y VI G C G++ A ++
Sbjct: 444 DTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLL 503
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
EE G P+ + Y + + L ++L+ AY LF + K
Sbjct: 504 EEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAK 542
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 177/393 (45%), Gaps = 10/393 (2%)
Query: 167 NVIVKALGRRKFFDFMCNVLSD-------MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
NV+V R FF C+ D M + G +PDL L+ MD +AG+ K
Sbjct: 374 NVVVYTSLIRNFFK--CDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRA 431
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
+ ++ G D S ++++ L + L+ +MK + + + YN VI G+
Sbjct: 432 LFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFC 491
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G+V + ++L+E+ G P +T+ +++GL + R+D+A +F+ K G +
Sbjct: 492 KSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQV 551
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
Y+++I + VG DE + M PN+ T+ L+ GL+K+ ++ +AL F+ M
Sbjct: 552 IYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSM 611
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
D P+ T + LC + A + +++ +K G K + Y ++ L+ G
Sbjct: 612 KDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNV 671
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
L+ + SG D Y +I GL + +A + EE+ KG L
Sbjct: 672 AQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVAL 731
Query: 519 SNKLLASNKLESAYNLFRKIKIARQNDYARRLW 551
+ L + LE A + ++ ++ +A R W
Sbjct: 732 LDALHKAECLEQAAIVGAVLRETAKSQHAARSW 764
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 149/349 (42%), Gaps = 37/349 (10%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P + ++ + G+ + + + ++++ G + + L ++ + V AA SL
Sbjct: 59 PAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSL 118
Query: 256 FNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
+ MK +++ YN+ I + K+G+V + E+ A G PD +T++ ++ L +
Sbjct: 119 LDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCK 178
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
A R+D+A+E+F+ M++ P AYN +I Y S G FDE + + C P++
Sbjct: 179 ANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVA 238
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y +++ L K K AL +FEEM R +P+ T + LC G AA K R
Sbjct: 239 YNCILTCLGKKGKTDKALRIFEEM-KRDAMPNLPTYNIIIGMLCKAGNVEAAF----KVR 293
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
M+E+G + +I LC +L+
Sbjct: 294 DA-------------------------------MKEAGLFPNVRTINIMIDRLCKAQKLD 322
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
A + E K P + L + L +++ AY ++ ++ A Q
Sbjct: 323 EACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQ 371
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 118/320 (36%), Gaps = 71/320 (22%)
Query: 286 MERVLKEIVAEGFSPDSLT-----------------------------------FSFLIE 310
+E++L E+ GF P + T ++ LI
Sbjct: 10 LEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIG 69
Query: 311 GLGRAGRIDDAIEVFDTMKEKG-----------------------------------CGP 335
L G D + +F+ M+E G
Sbjct: 70 ALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDA 129
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D YN I + VG D K++ M + P+ TYT ++ L K+ ++ +A+E+F
Sbjct: 130 DIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIF 189
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
E+M VP + + S G A + ++ R GC S+ AY +L L
Sbjct: 190 EQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKK 249
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
GK L ++ EM+ P + Y +I LC G +E A V + G P+
Sbjct: 250 GKTDKALRIFEEMKRDAMP-NLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTI 308
Query: 516 SKLSNKLLASNKLESAYNLF 535
+ + ++L + KL+ A ++F
Sbjct: 309 NIMIDRLCKAQKLDEACSIF 328
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 81/174 (46%)
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P T L++ +KSRK+ +A ++ + M P+ T+ + L G + +
Sbjct: 24 PTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLAL 83
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ + +++G ++++ L+R S G+ L L EM+ + + +D +Y I
Sbjct: 84 FNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGK 143
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
+G+++ A E G P + Y+ + L +N+L+ A +F +++ RQ
Sbjct: 144 VGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQ 197
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 190/444 (42%), Gaps = 68/444 (15%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D ++Y V++ R D +L +M + G+ +L + +++ + + G++++A
Sbjct: 328 LVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAE 387
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ R+ D+ LK D+ S N +L C+ H A +L + M + + V+TYN ++ G
Sbjct: 388 GVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGL 447
Query: 278 SKLGQ-----------------------------VVEMER------VLKEIVAEGFSPDS 302
++G + +ME + K+I+A GF+
Sbjct: 448 CRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSR 507
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+TF+ +I GL + G++ +A E+FD MK+ GC PD Y +I Y + + K
Sbjct: 508 ITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGA 567
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M P+++ Y LISGL KSR++ + ++ EM RG+ P+ T + ++ C G
Sbjct: 568 MEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGM 627
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE---- 478
A Y + + G ++ ++ L G+ L +M + G+ D E
Sbjct: 628 LDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLK 687
Query: 479 ----------------------------IYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
+Y IAGLC G++++A KGF P
Sbjct: 688 SDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVP 747
Query: 511 SRLVYSKLSNKLLASNKLESAYNL 534
Y L + A+ ++ A+ L
Sbjct: 748 DNFTYCTLIHGYSAAGNVDEAFRL 771
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 130/524 (24%), Positives = 221/524 (42%), Gaps = 51/524 (9%)
Query: 62 LFQ-ISSHNSF-PNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKG-VIED 118
FQ +S +F PNV +S V + R DE +L V L K K +G VI D
Sbjct: 88 FFQFVSKQQNFRPNV--KSYCKLVHILSRGRMYDETRAYLNQL--VDLCKFKDRGNVIWD 143
Query: 119 ALWNVNVDLSL-----DVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKAL 173
L V + + D++ KV L+ A+ +F N ++S N ++ L
Sbjct: 144 ELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMG--KCGRIPSLRSCNSLLNNL 201
Query: 174 GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA 233
+ V M + G+ PD+ +SI++++F + G+V +A + ++E+ G++ +
Sbjct: 202 VKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNI 261
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
+ + ++ V AA + M K V NV+TY ++I G+ K ++ E E+VL+
Sbjct: 262 VTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRG 321
Query: 293 IVAEG-FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG-------CG---------- 334
+ E PD + LI+G R G+IDDA+ + D M G C
Sbjct: 322 MQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRG 381
Query: 335 ------------------PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
PD+ +YN ++ Y G E M EP + TY
Sbjct: 382 EIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYN 441
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
L+ GL + DAL+++ M+ RG+ P ++ L+ L A ++K
Sbjct: 442 TLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILAR 501
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G S + ++ L GK +++ +M++ G DG Y +I G C + A
Sbjct: 502 GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQA 561
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
V R+ PS +Y+ L + L S +L +L ++ I
Sbjct: 562 FKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGI 605
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 119/508 (23%), Positives = 212/508 (41%), Gaps = 50/508 (9%)
Query: 76 KESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDA------LWNVNVDLSL 129
K+ + + +++ + L+P+ER GV + G I+DA + + + +L
Sbjct: 308 KQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNL 367
Query: 130 DVVGKVVN----RGNLSGEAMVL--FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMC 183
+ ++N RG + V+ +W N+ D SYN ++ R
Sbjct: 368 FICNSLINGYCKRGEIHEAEGVITRMVDW-----NLKPDSYSYNTLLDGYCREGHTSEAF 422
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
N+ M +EG+ P + T + ++ R G A+Q+ + G+ D + +L L
Sbjct: 423 NLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGL 482
Query: 244 CQRLHVGAASSLFNSMKGKVLFNV-MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
+ + AS+L+ + + +T+N +ISG K+G++VE E + ++ G SPD
Sbjct: 483 FKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDG 542
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+T+ LI+G +A + A +V M+ + P YN++IS E
Sbjct: 543 ITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTE 602
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG-----IVPST--------GT 409
M PN+ TY LI G K + A + EM + G I+ ST G
Sbjct: 603 MGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGR 662
Query: 410 ITS---FLEPLCSYG--PPHAAMM----MYKKARKVGCKLSLTAYKLLLRR-------LS 453
I ++ + +G P H + Y +K+ L + LL ++
Sbjct: 663 IDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIA 722
Query: 454 GFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
G K G + D + + G+ D Y +I G G ++ A + +E LR+G P
Sbjct: 723 GLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVP 782
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ + Y+ L N L S ++ A LF K+
Sbjct: 783 NIVTYNALINGLCKSENVDRAQRLFHKL 810
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 110/500 (22%), Positives = 206/500 (41%), Gaps = 60/500 (12%)
Query: 35 SYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVDE 94
S N LL+N KN + H+V +++ + + P+V+ S V VDE
Sbjct: 193 SCNSLLNNLVKNGETHTAHYVYQQMIRVGIV------PDVFMVSIM--VNAFCKDGKVDE 244
Query: 95 FLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAI 154
F++K++ GV N+ ++ V+ G++ VL F +
Sbjct: 245 --------AAGFVKKMENLGV------EPNIVTYHSLINGYVSLGDVEAAKGVLKF---M 287
Query: 155 KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG-VNPDLETLSIVMDSFIRAGQ 213
V+++V +Y +++K ++ D VL M +E + PD +++D + R G+
Sbjct: 288 SEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK 347
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
+ A+++L + GLK N+ N +
Sbjct: 348 IDDAVRLLDEMLRLGLKT----------------------------------NLFICNSL 373
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
I+G+ K G++ E E V+ +V PDS +++ L++G R G +A + D M ++G
Sbjct: 374 INGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGI 433
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
P YN ++ VG FD+ ++ + M P+ Y+ L+ GL K A
Sbjct: 434 EPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGAST 493
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+++++L RG S T + + LC G A ++ K + +GC Y+ L+
Sbjct: 494 LWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYC 553
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
G + M+ E+Y +I+GL +L ++ E +G P+ +
Sbjct: 554 KASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIV 613
Query: 514 VYSKLSNKLLASNKLESAYN 533
Y L + L+ A++
Sbjct: 614 TYGALIDGWCKEGMLDKAFS 633
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 145/315 (46%), Gaps = 13/315 (4%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PN+ +Y ++ + D + +M + G++ ++ S ++ R G++ +
Sbjct: 610 PNIV----TYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDE 665
Query: 217 AIQMLGRLEDFGLKFDAESL--NVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVI 274
A ++ ++ D G D E + + + Q++ A SL S K +L N + YNI I
Sbjct: 666 ANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKI----ADSLDESCKTFLLPNNIVYNIAI 721
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G K G+V + R + +GF PD+ T+ LI G AG +D+A + D M +G
Sbjct: 722 AGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLV 781
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ YNA+I+ + D + + + PN+ TY LI G K + A ++
Sbjct: 782 PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKL 841
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR---R 451
++M++ GI PS T ++ + LC +G +M + + K G L Y L++ R
Sbjct: 842 KDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIR 901
Query: 452 LSGFGKCGMLLDLWH 466
K L D+ H
Sbjct: 902 SGEMQKIHKLYDMMH 916
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 157/389 (40%), Gaps = 33/389 (8%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ M G +PD T ++D + +A V +A ++ G +E + E N ++ L
Sbjct: 529 IFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLF 588
Query: 245 QRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ + + L M + L N++TY +I GW K G + + E+ G S + +
Sbjct: 589 KSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANII 648
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA------------------------ 339
S ++ GL R GRID+A + M + G PD
Sbjct: 649 ICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKT 708
Query: 340 --------YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
YN I+ G D+ +++ +S P+ TY LI G + V +A
Sbjct: 709 FLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEA 768
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+ +EML RG+VP+ T + + LC A ++ K + G ++ Y L+
Sbjct: 769 FRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDG 828
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
G L +M E G Y +I GLC G +E ++ ++ + ++ G
Sbjct: 829 YCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSK 888
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+ Y L + S +++ + L+ + I
Sbjct: 889 LIEYCTLVQGYIRSGEMQKIHKLYDMMHI 917
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 152/342 (44%), Gaps = 2/342 (0%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
A++ ++ ++ YN ++ L + + + ++L++M G+ P++ T ++D + + G
Sbjct: 567 AMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEG 626
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNI 272
+ KA + + GL + + ++ L + + A+ L M F +
Sbjct: 627 MLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP--DHEC 684
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+ + + ++ L E P+++ ++ I GL + G++DDA F + KG
Sbjct: 685 FLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG 744
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD Y +I Y + G+ DE + M PN+ TY LI+GL KS V A
Sbjct: 745 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQ 804
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+F ++ +G+ P+ T + ++ C G AA + K + G S+ Y L+ L
Sbjct: 805 RLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL 864
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G + L ++M ++G S Y ++ G G+++
Sbjct: 865 CKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQ 906
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 183/461 (39%), Gaps = 59/461 (12%)
Query: 118 DALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRK 177
+A+ +N S D+V V+ L+ A + FF + K N +VKSY +V L R +
Sbjct: 57 NAISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGR 116
Query: 178 FFD---FMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
+D N L D+ K F G V +++G +F F
Sbjct: 117 MYDETRAYLNQLVDLCK----------------FKDRGNVIWD-ELVGVYREFA--FSPT 157
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
+++L ++ A +F++M K + ++ + N +++ K G+ V +++
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+ G PD S ++ + G++D+A M+ G P+ Y+++I+ Y+S+GD
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLK----------------------------- 384
+ K MS N+ TYT LI G K
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337
Query: 385 -------SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
+ K+ DA+ + +EML G+ + S + C G H A + +
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
K +Y LL G +L +M + G Y ++ GLC +G ++A+
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ +++G P + YS L + L E A L++ I
Sbjct: 458 QIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 498
>gi|297741611|emb|CBI32743.3| unnamed protein product [Vitis vinifera]
Length = 772
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 203/431 (47%), Gaps = 14/431 (3%)
Query: 136 VNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
V G+ + + + FF W + D ++ I++ LGR + +L DM K+GV
Sbjct: 125 VLHGSRNSDHALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNHARCILLDMPKKGVE 184
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
D + +++DS+ +AG V +++++ ++++ G++ +S + + + +R A
Sbjct: 185 WDEDLFVLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRY 244
Query: 256 FNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
FN+M + V+ TYNI+I G+ +V R +E+ SPD +T++ +I G R
Sbjct: 245 FNAMLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYR 304
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
++++A + F MK + P +Y +I Y+SVG D+ ++ ++ M S+ +PN T
Sbjct: 305 IKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVT 364
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI-TSFLEPLCSYGPPHAAMMMYKKA 433
Y+ L+ GL K+ +A V +EM++R I P +I + C G AA + K
Sbjct: 365 YSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAM 424
Query: 434 RKVGCKLSLTAYKLLLRRLSGFG---KCGMLLDLWHEMQ-----ESGYPSDGEIYEYVIA 485
++ Y +L+ G + LLD E + ++ + Y +I
Sbjct: 425 IRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIE 484
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR---KIKIAR 542
LCN GQ A + + ++KG + ++ L ESA+ + + + ++ R
Sbjct: 485 YLCNSGQTSKAETLFRQLMKKG-VQDPIAFNNLIRGHSKEGAPESAFEILKIMGRREVPR 543
Query: 543 QNDYARRLWRS 553
+ D R L S
Sbjct: 544 EADAYRLLIES 554
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 175/423 (41%), Gaps = 46/423 (10%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K V + +KSY+ + K + RR + + M EGV P T +I++ F + +
Sbjct: 213 MKELGVERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSLK 272
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
V A + +++ + D + N ++ + + A F MKG+ + V++Y
Sbjct: 273 VETANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTT 332
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G+ +G+V + R+ +E+ + G P+++T+S L+ GL ++ +A V M E+
Sbjct: 333 MIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERY 392
Query: 333 CGP-DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
P D + + +I+ G D K M + Y LI KS A
Sbjct: 393 IAPKDNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRA 452
Query: 392 LEVFEEMLDRGIV---------PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+++ ++++++ I+ S+G +E LC+ G A ++++ K G + +
Sbjct: 453 VKLLDKLIEKEIILRPQNSLEMESSG-YNLIIEYLCNSGQTSKAETLFRQLMKKGVQDPI 511
Query: 443 T----------------------------------AYKLLLRRLSGFGKCGMLLDLWHEM 468
AY+LL+ G+ M
Sbjct: 512 AFNNLIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGM 571
Query: 469 QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
E+G+ D ++ V+ L G+++ A VM + KG + + +K+ LL +
Sbjct: 572 IENGHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHV 631
Query: 529 ESA 531
E A
Sbjct: 632 EEA 634
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 136/326 (41%), Gaps = 11/326 (3%)
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL--------EDFGLK 230
D +VL M + + + +++++F ++G +A+++L +L L+
Sbjct: 414 LDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLE 473
Query: 231 FDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVL 290
++ N+++ LC A +LF + K + + + +N +I G SK G +L
Sbjct: 474 MESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQDPIAFNNLIRGHSKEGAPESAFEIL 533
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
K + ++ + LIE + G DA D M E G PD++ + +V+ +
Sbjct: 534 KIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFED 593
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
G + M + NMD +++ LL V +AL + +++ G P
Sbjct: 594 GRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMNNGCEPD---F 650
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
L LC+ G AA+ + + +S ++Y+ +L L GK + ++ +
Sbjct: 651 DGLLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLTAGKTLNAYSILCKIMQ 710
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENA 496
G +D + +I L G + A
Sbjct: 711 KGGATDWSSCKDLIRSLNEEGNTKQA 736
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 177/388 (45%), Gaps = 6/388 (1%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV +YN ++K + ++S+M +G +PD + VM + ++ +
Sbjct: 186 PNVV----TYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIRE 241
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS-LFNSMKGKVLFNVMTYNIVIS 275
+ ++ ++ED L D + N ++ LC+ H A L + K + + Y+ ++
Sbjct: 242 VMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVD 301
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
+ K G++ + + ++ E+ G PD +T++ +I G +AG + A ++ M + GC P
Sbjct: 302 SYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKP 361
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+T +Y A + G+ E + K PN TY+ ++ G + K++DA +V
Sbjct: 362 NTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVV 421
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
EM+ +G P+ I L+ LC G A ++ +GC ++ + ++ R
Sbjct: 422 REMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQ 481
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
L L +M S D Y +I L G++E A + + L+KG P+ + Y
Sbjct: 482 DDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTY 541
Query: 516 SKLSNKLLASNKLESAYNLFRKIKIARQ 543
+ ++ ++E NL K+ + RQ
Sbjct: 542 RTVIHRYGQIGRVEDLLNLLDKM-LTRQ 568
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 188/424 (44%), Gaps = 38/424 (8%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FF W+ + D Y V++ L + K VL M + G+ + VM S+
Sbjct: 69 FFFWSDRQWRYRHDPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSY 128
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNV 267
RAG++ A+Q+L ++ G++ + N + L + A M+ ++ NV
Sbjct: 129 SRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNV 188
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD-------------------------- 301
+TYN +I G+ L +V + ++ E+ +G SPD
Sbjct: 189 VTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEK 248
Query: 302 ---------SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+T++ LI L + D+A++ +++G D Y+A++ +Y G
Sbjct: 249 MEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGR 308
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
D+ + M + C P++ TYT +I+G ++ +V A ++ ++M G P+T + T+
Sbjct: 309 MDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTA 368
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
FL+ LC G A M K + + + Y +++ GK D+ EM G
Sbjct: 369 FLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKG 428
Query: 473 -YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
+P+ EI ++ LC IG+++ A MEE L G + + ++ + ++ + +E+A
Sbjct: 429 FFPTPVEI-NLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAA 487
Query: 532 YNLF 535
+L
Sbjct: 488 LSLL 491
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 170/376 (45%), Gaps = 5/376 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D Y+ IV + + D ++++M G PD+ T + +++ F +AG+V +A +ML
Sbjct: 292 DKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKML 351
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
++ G K + S L LCQ+ + A + + + + N +TY++V+ G+ +
Sbjct: 352 QQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRRE 411
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ + V++E++ +GF P + + L++ L R GR+D+A + + GC + +
Sbjct: 412 GKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNF 471
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
VI + D + + M N P+ TYT +I L K ++ +A E+ +ML
Sbjct: 472 TTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLK 531
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAM-MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
+GI P+ T + + G + ++ K + C+ TA+ ++ +L FG
Sbjct: 532 KGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQECR---TAFNQVIEKLCTFGNLE 588
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
L ++ + D ++ G +A V + P + K+
Sbjct: 589 AADKLLGKVLRTASRIDANTCHVLMESYLRKGIPLSAYKVACRMFSRSLIPDLKLCEKVC 648
Query: 520 NKLLASNKLESAYNLF 535
KL+ K E A NLF
Sbjct: 649 KKLMQEGKSEEADNLF 664
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 98/242 (40%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
G F ++ RAG++ +A++V M++ G P+ N I + ++
Sbjct: 113 GIQRTPQDFCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKA 172
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
+++ + M PN+ TY LI G +V DA+E+ EM +G P + + +
Sbjct: 173 LRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGF 232
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
LC M + +K Y L+ L L E Q+ G+ D
Sbjct: 233 LCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVD 292
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
Y ++ C G+++ A ++ E +G P + Y+ + N + ++ A + +
Sbjct: 293 KVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQ 352
Query: 537 KI 538
++
Sbjct: 353 QM 354
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/241 (18%), Positives = 96/241 (39%)
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
+ D + + +++ L + A V M +G + V+ +Y G M
Sbjct: 79 YRHDPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAM 138
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+ M EPN+ I L+ + + AL E M GI+P+ T ++
Sbjct: 139 QVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGY 198
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
C AM + + GC +Y ++ L + ++D+ +M+++ +D
Sbjct: 199 CDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQ 258
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
Y +I LC + A+ + E+ ++GF ++ YS + + +++ A + +
Sbjct: 259 VTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNE 318
Query: 538 I 538
+
Sbjct: 319 M 319
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 155 KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV 214
KHP D +Y I+ ALG++ + + M K+G++P T V+ + + G+V
Sbjct: 499 KHP----DAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRV 554
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-----FNVMT 269
+ +L ++ + + N V+ LC ++ AA L GKVL + T
Sbjct: 555 EDLLNLLDKM--LTRQECRTAFNQVIEKLCTFGNLEAADKLL----GKVLRTASRIDANT 608
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
++++ + + G + +V + + PD + + L + G+ ++A +F
Sbjct: 609 CHVLMESYLRKGIPLSAYKVACRMFSRSLIPDLKLCEKVCKKLMQEGKSEEADNLFLRFV 668
Query: 330 EKG 332
E+G
Sbjct: 669 ERG 671
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 174/377 (46%), Gaps = 2/377 (0%)
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
K YN +++L R ++M V S + ++G+ PD T + ++ S+ + G + A +
Sbjct: 149 KCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRL 208
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQ 282
L + GL+ + + N ++ C+ + A LF M N +Y I+I G
Sbjct: 209 LLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKC 268
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V + + + +G SP+ F+FLI GL ++GR+ DA +FD M + G P YNA
Sbjct: 269 VRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNA 328
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I Y +G ++ +K + M C P+ TY LI GL +K +A E+ + G
Sbjct: 329 MIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEG 387
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P+ T T+ + C A+ M K CKL L + L+ L +
Sbjct: 388 FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAK 447
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+L +E+ +G + Y +I G C G+++ A+ V++ R G P+ Y+ L L
Sbjct: 448 ELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGL 507
Query: 523 LASNKLESAYNLFRKIK 539
+ KL A L K++
Sbjct: 508 VKDKKLHKAMALLTKMQ 524
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 169/346 (48%), Gaps = 2/346 (0%)
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-K 260
+I++ A V KA+ + ++ G + + ++ LC+ VG A LF++M +
Sbjct: 257 TILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQ 316
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
V+ +VMTYN +I G+SKLG++ + ++ + + G PD T++ LI GL + ++
Sbjct: 317 NGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEE 375
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A E+ + ++G P + +I+ Y FD+ ++ M S C+ ++ + +LI+
Sbjct: 376 AEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLIN 435
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
L+K ++ +A E+ E+ G+VP+ T TS ++ C G A+ + K + GC+
Sbjct: 436 SLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQP 495
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+ Y L+ L K + L +MQ+ G + Y ++ G C+ +NA +
Sbjct: 496 NAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF 555
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDY 546
E + G P Y+ L++ L + + E AY+ + +A Y
Sbjct: 556 EMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVY 601
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 194/454 (42%), Gaps = 38/454 (8%)
Query: 81 NSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGN 140
NS+ + D + E LL E G+ + +I+ + VD++L+V+ K++ R
Sbjct: 435 NSLIKKDRLKEAKE-LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL-KMMERDG 492
Query: 141 LSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
A W +YN ++ L + K +L+ M K+G+ P++ T
Sbjct: 493 CQPNA------W------------TYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVIT 534
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
+ ++ A ++ +E GLK D + V+ LC+ A S F K
Sbjct: 535 YTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYS-FIVRK 593
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
G L V Y +I G+SK G +++ ++ EG +PDS T+S L+ L + R+++
Sbjct: 594 GVALTKVY-YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNE 652
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A+ + D M +G AY +I + G D + Y M+S +P+ TYT I+
Sbjct: 653 ALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFIN 712
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
K ++ DA ++ +M G+ P T ++ G A K+ C+
Sbjct: 713 SYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEP 772
Query: 441 SLTAYKLLLRRL--------SGFGKCGM--LLDL---WH---EMQESGYPSDGEIYEYVI 484
+ Y LLL+ L GM L++L W M + G Y +I
Sbjct: 773 NYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLI 832
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
AG C G+LE A L+++ KG P+ +Y+ L
Sbjct: 833 AGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLL 866
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 178/416 (42%), Gaps = 38/416 (9%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HP D +YN ++ L +K + +L++ KEG P + T + +++ + A +
Sbjct: 355 HP----DDWTYNTLIYGLCDQKTEEAE-ELLNNAVKEGFTPTVVTFTNLINGYCMAEKFD 409
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVI 274
A++M ++ K D + ++ L ++ + A L N + L NV+TY +I
Sbjct: 410 DALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSII 469
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ K G+V VLK + +G P++ T++ L+ GL + ++ A+ + M++ G
Sbjct: 470 DGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGII 529
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY------------------- 375
P+ Y ++ DFD + ++ M +P+ Y
Sbjct: 530 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 589
Query: 376 -------------TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
T LI G K+ A + E M+D G P + T + L LC
Sbjct: 590 IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 649
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
+ A+ + + G K ++ AY +L+ + GK +++EM SG+ Y
Sbjct: 650 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTV 709
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
I C G+LE+A ++ + R+G P + Y+ L + ++ A++ +++
Sbjct: 710 FINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRM 765
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 179/404 (44%), Gaps = 19/404 (4%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKAL---GR----RKFFDFMCNVLSDMAKEGVNP 196
+A+VLF +K + +V+++ ++ L GR R FD M + GV P
Sbjct: 271 KALVLFL--MMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFD-------AMPQNGVVP 321
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
+ T + ++ + + G++ A+++ +E G D + N +++ LC + A L
Sbjct: 322 SVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLN 381
Query: 257 NSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
N++K V+T+ +I+G+ + + R+ ++++ D F LI L +
Sbjct: 382 NAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKD 441
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
R+ +A E+ + + G P+ Y ++I Y G D ++ K M C+PN TY
Sbjct: 442 RLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYN 501
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
L+ GL+K +K+ A+ + +M GI+P+ T T+ L+ C A +++ +
Sbjct: 502 SLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQN 561
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G K AY +L L K G + + + G Y +I G G + A
Sbjct: 562 GLKPDEHAYAVLTDALC---KAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFA 618
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
++E + +G P YS L + L +L A + ++ +
Sbjct: 619 ATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL 662
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 179/400 (44%), Gaps = 11/400 (2%)
Query: 135 VVNRGNL-SGEAMVLFFNWAIKHPN------VAKDVKSYNVIVKALGRRKFFDFMCNVLS 187
VV NL +G M F+ A++ N D++ + ++ +L ++ +L+
Sbjct: 392 VVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLN 451
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
+++ G+ P++ T + ++D + ++G+V A+++L +E G + +A + N +++ L +
Sbjct: 452 EISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDK 511
Query: 248 HVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
+ A +L M K ++ NV+TY ++ G R+ + + G PD ++
Sbjct: 512 KLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYA 571
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
L + L +AGR A E + + KG Y +I + G+ D + M
Sbjct: 572 VLTDALCKAGR---AEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDE 628
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
C P+ TY+ L+ L K +++ +AL + ++M RGI + T ++ + G A
Sbjct: 629 GCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHA 688
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
MY + G K S T Y + + G+ DL +M+ G D Y +I G
Sbjct: 689 KRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDG 748
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
++G ++ A ++ + P+ Y L LL N
Sbjct: 749 CGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN 788
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 133/293 (45%), Gaps = 1/293 (0%)
Query: 246 RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
R+ A ++ + ++ + YN + ++ M RV ++V +G PD++T+
Sbjct: 127 RVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTY 186
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ +I+ + G + A F + E G P+T NA++ Y G+ + + M
Sbjct: 187 NTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPL 246
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
C+ N +YT LI GL ++ V AL +F M G P+ T + LC G
Sbjct: 247 MGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGD 306
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A +++ + G S+ Y ++ S G+ L + M+++G D Y +I
Sbjct: 307 ARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIY 366
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GLC+ + E A ++ ++++GF P+ + ++ L N + K + A + K+
Sbjct: 367 GLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKM 418
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 166/374 (44%), Gaps = 17/374 (4%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y ++ + DF ++ M EG PD T S+++ + + ++ +A+ +L ++
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
G+K + +++ + + A ++N M + TY + I+ + K G++
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 721
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ E ++ ++ EG +PD +T++ LI+G G G ID A M C P+ Y ++
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 781
Query: 345 SNYI----------------SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ + ++ + D + + M + P + TY+ LI+G K+ ++
Sbjct: 782 KHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRL 841
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A + + M +G+ P+ T ++ C A+ + G + L +Y+LL
Sbjct: 842 EEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLL 901
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L G + L+ ++ E GY D ++ + GL G ++ ++ ++
Sbjct: 902 VVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYC 961
Query: 509 CPSRLVYSKLSNKL 522
C S Y+ ++NK+
Sbjct: 962 CISSQTYALVTNKM 975
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 142/352 (40%), Gaps = 71/352 (20%)
Query: 103 RGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKD 162
+GV L K+ +I+ N D + ++ ++++ G D
Sbjct: 593 KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG-------------------CTPD 633
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+Y+V++ AL ++K + +L M+ G+ + +I++D +R G+ A +M
Sbjct: 634 SYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYN 693
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+ G K A + V + C+ + A L M+ + V +V+TYNI+I G +G
Sbjct: 694 EMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMG 753
Query: 282 QV------------------------------------------------VEME---RVL 290
+ +E++ ++L
Sbjct: 754 YIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLL 813
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
+ +V G +P T+S LI G +AGR+++A + D M KG P+ + Y +I
Sbjct: 814 ERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDT 873
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
F++ + + MS +P +++Y L+ GL +F ++L+ G
Sbjct: 874 KFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELG 925
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 190/444 (42%), Gaps = 68/444 (15%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D ++Y V++ R D +L +M + G+ +L + +++ + + G++++A
Sbjct: 328 LVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAE 387
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ R+ D+ LK D+ S N +L C+ H A +L + M + + V+TYN ++ G
Sbjct: 388 GVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGL 447
Query: 278 SKLGQ-----------------------------VVEMER------VLKEIVAEGFSPDS 302
++G + +ME + K+I+A GF+
Sbjct: 448 CRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSR 507
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+TF+ +I GL + G++ +A E+FD MK+ GC PD Y +I Y + + K
Sbjct: 508 ITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGA 567
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M P+++ Y LISGL KSR++ + ++ EM RG+ P+ T + ++ C G
Sbjct: 568 MEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGM 627
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE---- 478
A Y + + G ++ ++ L G+ L +M + G+ D E
Sbjct: 628 LDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLK 687
Query: 479 ----------------------------IYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
+Y IAGLC G++++A KGF P
Sbjct: 688 SDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVP 747
Query: 511 SRLVYSKLSNKLLASNKLESAYNL 534
Y L + A+ ++ A+ L
Sbjct: 748 DNFTYCTLIHGYSAAGNVDEAFRL 771
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 119/508 (23%), Positives = 212/508 (41%), Gaps = 50/508 (9%)
Query: 76 KESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDA------LWNVNVDLSL 129
K+ + + +++ + L+P+ER GV + G I+DA + + + +L
Sbjct: 308 KQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNL 367
Query: 130 DVVGKVVN----RGNLSGEAMVL--FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMC 183
+ ++N RG + V+ +W N+ D SYN ++ R
Sbjct: 368 FICNSLINGYCKRGEIHEAEGVITRMVDW-----NLKPDSYSYNTLLDGYCREGHTSEAF 422
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
N+ M +EG+ P + T + ++ R G A+Q+ + G+ D + +L L
Sbjct: 423 NLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGL 482
Query: 244 CQRLHVGAASSLFNSMKGKVLFNV-MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
+ + AS+L+ + + +T+N +ISG K+G++VE E + ++ G SPD
Sbjct: 483 FKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDG 542
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+T+ LI+G +A + A +V M+ + P YN++IS E
Sbjct: 543 ITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTE 602
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG-----IVPST--------GT 409
M PN+ TY LI G K + A + EM + G I+ ST G
Sbjct: 603 MGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGR 662
Query: 410 ITS---FLEPLCSYG--PPHAAMM----MYKKARKVGCKLSLTAYKLLLRR-------LS 453
I ++ + +G P H + Y +K+ L + LL ++
Sbjct: 663 IDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIA 722
Query: 454 GFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
G K G + D + + G+ D Y +I G G ++ A + +E LR+G P
Sbjct: 723 GLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVP 782
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ + Y+ L N L S ++ A LF K+
Sbjct: 783 NIVTYNALINGLCKSENVDRAQRLFHKL 810
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 129/524 (24%), Positives = 220/524 (41%), Gaps = 51/524 (9%)
Query: 62 LFQ-ISSHNSF-PNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKG-VIED 118
FQ +S +F PNV +S V + R DE +L V L K K +G VI D
Sbjct: 88 FFQFVSKQQNFRPNV--KSYCKLVHILSRGRMYDETRAYLNQL--VDLCKFKDRGNVIWD 143
Query: 119 ALWNVNVDLSL-----DVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKAL 173
L V + + D++ KV L+ A+ +F N ++S N ++ L
Sbjct: 144 ELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMG--KCGRIPSLRSCNSLLNNL 201
Query: 174 GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA 233
+ V M + G+ PD+ +SI++++F + G+V +A + ++E+ G++ +
Sbjct: 202 VKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNI 261
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
+ + ++ V AA + M K V NV+TY ++I G+ K ++ E E+VL+
Sbjct: 262 VTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRG 321
Query: 293 IVAEG-FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG-------CG---------- 334
+ E PD + LI+G R G+IDDA+ + D M G C
Sbjct: 322 MQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRG 381
Query: 335 ------------------PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
PD+ +YN ++ Y G E M EP + TY
Sbjct: 382 EIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYN 441
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
L+ GL + DAL+++ M+ G+ P ++ L+ L A ++K
Sbjct: 442 TLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILAR 501
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G S + ++ L GK +++ +M++ G DG Y +I G C + A
Sbjct: 502 GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQA 561
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
V R+ PS +Y+ L + L S +L +L ++ I
Sbjct: 562 FKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGI 605
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/500 (22%), Positives = 206/500 (41%), Gaps = 60/500 (12%)
Query: 35 SYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVDE 94
S N LL+N KN + H+V +++ + + P+V+ S V VDE
Sbjct: 193 SCNSLLNNLVKNGETHTAHYVYQQMIRVGIV------PDVFMVSIM--VNAFCKDGKVDE 244
Query: 95 FLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAI 154
F++K++ GV N+ ++ V+ G++ VL F +
Sbjct: 245 --------AAGFVKKMENLGV------EPNIVTYHSLINGYVSLGDVEAAKGVLKF---M 287
Query: 155 KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG-VNPDLETLSIVMDSFIRAGQ 213
V+++V +Y +++K ++ D VL M +E + PD +++D + R G+
Sbjct: 288 SEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK 347
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
+ A+++L + GLK N+ N +
Sbjct: 348 IDDAVRLLDEMLRLGLKT----------------------------------NLFICNSL 373
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
I+G+ K G++ E E V+ +V PDS +++ L++G R G +A + D M ++G
Sbjct: 374 INGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGI 433
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
P YN ++ VG FD+ ++ + M P+ Y+ L+ GL K A
Sbjct: 434 EPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGAST 493
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+++++L RG S T + + LC G A ++ K + +GC Y+ L+
Sbjct: 494 LWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYC 553
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
G + M+ E+Y +I+GL +L ++ E +G P+ +
Sbjct: 554 KASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIV 613
Query: 514 VYSKLSNKLLASNKLESAYN 533
Y L + L+ A++
Sbjct: 614 TYGALIDGWCKEGMLDKAFS 633
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 139/294 (47%), Gaps = 6/294 (2%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ ++ +Y ++ + D + +M + G++ ++ S ++ R G++ +A
Sbjct: 608 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEAN 667
Query: 219 QMLGRLEDFGLKFDAESL--NVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISG 276
++ ++ D G D E + + + Q++ A SL S K +L N + YNI I+G
Sbjct: 668 LLMQKMVDHGFFPDHECFLKSDIRYAAIQKI----ADSLDESCKTFLLPNNIVYNIAIAG 723
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K G+V + R + +GF PD+ T+ LI G AG +D+A + D M +G P+
Sbjct: 724 LCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPN 783
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YNA+I+ + D + + + PN+ TY LI G K + A ++ +
Sbjct: 784 IVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKD 843
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
+M++ GI PS T ++ + LC +G +M + + K G L Y L++
Sbjct: 844 KMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQ 897
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 156/393 (39%), Gaps = 37/393 (9%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ M G +PD T ++D + +A V +A ++ G +E + E N ++ L
Sbjct: 529 IFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLF 588
Query: 245 QRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ + + L M + L N++TY +I GW K G + + E+ G S + +
Sbjct: 589 KSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANII 648
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA------------------------ 339
S ++ GL R GRID+A + M + G PD
Sbjct: 649 ICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKT 708
Query: 340 --------YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
YN I+ G D+ +++ +S P+ TY LI G + V +A
Sbjct: 709 FLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEA 768
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+ +EML RG+VP+ T + + LC A ++ K + G ++ Y L+
Sbjct: 769 FRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDG 828
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
G L +M E G Y +I GLC G +E ++ ++ + ++ G
Sbjct: 829 YCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSK 888
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
+ Y L + S YN K + +QN
Sbjct: 889 LIEYCTLVQGGFKT----SNYNEMSKPEALKQN 917
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 147/330 (44%), Gaps = 4/330 (1%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
A++ ++ ++ YN ++ L + + ++L++M G+ P++ T ++D + + G
Sbjct: 567 AMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEG 626
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNI 272
+ KA + + GL + + ++ L + + A+ L M F +
Sbjct: 627 MLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP--DHEC 684
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+ + + ++ L E P+++ ++ I GL + G++DDA F + KG
Sbjct: 685 FLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG 744
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD Y +I Y + G+ DE + M PN+ TY LI+GL KS V A
Sbjct: 745 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQ 804
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+F ++ +G+ P+ T + ++ C G AA + K + G S+ Y L+ L
Sbjct: 805 RLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL 864
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
G + L ++M ++G D ++ EY
Sbjct: 865 CKHGDIERSMKLLNQMIKAGV--DSKLIEY 892
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 182/461 (39%), Gaps = 59/461 (12%)
Query: 118 DALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRK 177
+A+ +N S D+V V+ L+ A + FF + K N +VKSY +V L R +
Sbjct: 57 NAISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGR 116
Query: 178 FFD---FMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
+D N L D+ K F G V +++G +F F
Sbjct: 117 MYDETRAYLNQLVDLCK----------------FKDRGNVIWD-ELVGVYREFA--FSPT 157
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
+++L ++ A +F++M K + ++ + N +++ K G+ V +++
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+ G PD S ++ + G++D+A M+ G P+ Y+++I+ Y+S+GD
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLK----------------------------- 384
+ K MS N+ TYT LI G K
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337
Query: 385 -------SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
+ K+ DA+ + +EML G+ + S + C G H A + +
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
K +Y LL G +L +M + G Y ++ GLC +G ++A+
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ ++ G P + YS L + L E A L++ I
Sbjct: 458 QIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 498
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 100/204 (49%), Gaps = 1/204 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN+ + L + D S ++ +G PD T ++ + AG V +A ++ +
Sbjct: 717 YNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEML 776
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVV 284
GL + + N ++ LC+ +V A LF+ + K LF NV+TYN +I G+ K+G +
Sbjct: 777 RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMD 836
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
++ +++ EG SP +T+S LI GL + G I+ ++++ + M + G Y ++
Sbjct: 837 AAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLV 896
Query: 345 SNYISVGDFDECMKYYKGMSSYNC 368
+++E K + NC
Sbjct: 897 QGGFKTSNYNEMSKPEALKQNMNC 920
>gi|125528152|gb|EAY76266.1| hypothetical protein OsI_04202 [Oryza sativa Indica Group]
Length = 528
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 188/426 (44%), Gaps = 13/426 (3%)
Query: 104 GVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDV 163
G + +G++E S VV V+ R S A F WA P A
Sbjct: 90 GFHADAARARGLLE----RCGATASEPVVVAVLARLRNSCAAAHAAFRWASAQPGYAPGR 145
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+Y+ ++ L + + FD +L M + + + +++ + A V A+
Sbjct: 146 HAYHSMLAILAKHRRFDDARALLDQMRRSSLASPAAVM-LLIRRYCAARDVAGAVAAFRA 204
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQV 283
L G + + +L LC+ +V A L S + + F ++N+V++GW + +
Sbjct: 205 LPSLGFRPGVAEFHGLLTALCRYKNVQDAEHLLLSSEKEFPFETKSFNVVLNGWCNMVRS 264
Query: 284 V-EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V E +R + +G D +++ +I +AG +D +++F+ MKE G PD YNA
Sbjct: 265 VREAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDTVMKLFNRMKEAGVVPDRKIYNA 324
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
V+ +E + M P+ T+ LI L K+R+V +A ++ ++ML RG
Sbjct: 325 VVYALAKGRCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCKARQVQEARKMLDDMLGRG 384
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
+ PS T + L+ S P + K +++ C + + +L+R+ + + +
Sbjct: 385 LSPSVRTFHALLDVARS---PIEVFDLLDKMKELQCDPEMDTFIMLIRKFCRWRQHDSVE 441
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR----LVYSKL 518
LW M +G D Y +I GL G+LE + EE KGF P + ++ + L
Sbjct: 442 KLWSAMPANGLSPDRSAYIVLIHGLFLNGRLEESAKYYEEMKAKGFPPEKKTEEMIQAWL 501
Query: 519 SNKLLA 524
S + LA
Sbjct: 502 SGRELA 507
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 100/246 (40%), Gaps = 15/246 (6%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
G++P + ++ L + R DDA + D M+ A +I Y + D
Sbjct: 140 GYAPGRHAYHSMLAILAKHRRFDDARALLDQMRRSSLA-SPAAVMLLIRRYCAARDVAGA 198
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML---DRGIVPSTGTITSF 413
+ ++ + S P + + L++ L + + V DA E +L ++ T +
Sbjct: 199 VAAFRALPSLGFRPGVAEFHGLLTALCRYKNVQDA----EHLLLSSEKEFPFETKSFNVV 254
Query: 414 LEPLCSYGPPHAAMMMYKKARKV-GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
L C+ + A ++ G K + +Y ++ S G ++ L++ M+E+G
Sbjct: 255 LNGWCNMVRSVREAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDTVMKLFNRMKEAG 314
Query: 473 YPSDGEIYEYVIAGLCN---IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
D +IY V+ L + + + V MEE KG P ++ L L + +++
Sbjct: 315 VVPDRKIYNAVVYALAKGRCVNEAKALVRSMEE---KGVAPDTATFNSLIRPLCKARQVQ 371
Query: 530 SAYNLF 535
A +
Sbjct: 372 EARKML 377
>gi|224093900|ref|XP_002310039.1| predicted protein [Populus trichocarpa]
gi|222852942|gb|EEE90489.1| predicted protein [Populus trichocarpa]
Length = 507
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 194/429 (45%), Gaps = 7/429 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLS-GEAM--VLFFNWAIKHPNVAKDVKSYNVIVKA 172
++ +L + V LS D++ KV+ R S G + + FFN+ S + ++
Sbjct: 59 LKQSLKSTGVFLSNDLIDKVLKRVRFSHGNPLQALDFFNFTADRRGFYHSSYSLDTMLYI 118
Query: 173 LGRRKFFDFMCNVLSDMAKEGVN-PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF 231
LGR + FD + +VL D+ ++ N TL +V+ + V ++ + + F
Sbjct: 119 LGRSRKFDHIWDVLIDIKRKDRNLITPRTLQVVLGRVAKVCSVRMTVESFWKFKRLVPVF 178
Query: 232 DAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLK 291
D N +L LCQ + A ++++ +K N+ T+NI++SGW E E +
Sbjct: 179 DTSCFNALLRTLCQEKSMSDARNVYHHLKKGFRPNLQTFNILLSGWK---SSEEAELFYE 235
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
E+ G PD +T++ LI+ + ++ A V M+E+ PD Y ++I VG
Sbjct: 236 EMKELGVKPDIVTYNSLIDVFCKGRELEKAYGVVARMREEDILPDVITYTSIIGGLGLVG 295
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
D+ K M + C P++ Y +I ++++ A + EM +G+ P+ +
Sbjct: 296 QPDKARDMLKEMKEHGCYPDVAAYNAVIRNYCIAKRLDAAYSLMAEMESKGMSPNATSYN 355
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
F + Y + GC + + L++ K M L LW++M E
Sbjct: 356 LFFRVFSWSNDLRNSWDFYGRMMDAGCLPNTQSCMFLIKLFKRHEKVEMALQLWNDMVEK 415
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G+ S + + ++ LC++G+L A + + KG PS + + ++ + +NK ++
Sbjct: 416 GFGSYILVSDVLLGMLCDMGKLVEAEKCFLQMVEKGHKPSNVSFRRIKVLMELANKHDAI 475
Query: 532 YNLFRKIKI 540
NL K+ I
Sbjct: 476 RNLSEKMAI 484
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 124/277 (44%), Gaps = 30/277 (10%)
Query: 31 RSNL-SYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSS 89
R NL ++N LLS K + + + +KEL I ++NS +V+ + R
Sbjct: 211 RPNLQTFNILLSGWKSSEEAELFYEEMKELGVKPDIVTYNSLIDVFCKGRE--------- 261
Query: 90 RAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLF 149
E+ GV + +++ + ++ D + ++ L +VG+ ++ E
Sbjct: 262 ---------LEKAYGV-VARMREEDILPDVITYTSIIGGLGLVGQPDKARDMLKE----- 306
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
+K DV +YN +++ K D +++++M +G++P+ + ++ F
Sbjct: 307 ----MKEHGCYPDVAAYNAVIRNYCIAKRLDAAYSLMAEMESKGMSPNATSYNLFFRVFS 362
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN-VM 268
+ + + GR+ D G + +S ++ + V A L+N M K + ++
Sbjct: 363 WSNDLRNSWDFYGRMMDAGCLPNTQSCMFLIKLFKRHEKVEMALQLWNDMVEKGFGSYIL 422
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
++++ +G++VE E+ ++V +G P +++F
Sbjct: 423 VSDVLLGMLCDMGKLVEAEKCFLQMVEKGHKPSNVSF 459
>gi|116789117|gb|ABK25122.1| unknown [Picea sitchensis]
Length = 572
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 178/382 (46%), Gaps = 5/382 (1%)
Query: 128 SLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLS 187
S ++V K++ R G+A F WA P+ + V Y+ ++ LG + FD ++
Sbjct: 138 SPNLVQKLLRRLQYDGKAAFRVFQWAGSQPDYSHTVSVYHTMISILGVHRKFDKGWGLIR 197
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
M + + + +TL I++ + A KAI+ ++ F L D++ +L LC+ +
Sbjct: 198 KMHERAM-VNRQTLMIMIKRYAAAHDARKAIKTFHAMDKFKLAADSDDFLCLLCALCRNM 256
Query: 248 HVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLG-QVVEMERVLKEIVAEGFSPDSLTFS 306
V A L + K ++N+++ GW + V +++R+ +E+ +PD+ +++
Sbjct: 257 FVEEAEELIHFNKKCYPLETKSFNVILYGWCNIFVDVYQVKRLWEEMSNLCITPDAFSYT 316
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
+I +AG+ D + ++D MK+KG P+ YNAVI E + + +
Sbjct: 317 TVICCFSKAGKFYDVVRLYDEMKKKGFTPNLKVYNAVIYVLSKERCVKEALNLFNKIREM 376
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
PN TYT LI L ++ K +A ++M+ G VP+ +F + + G A
Sbjct: 377 GFHPNAVTYTYLIYLLCRTWKPEEAYSYLDKMIMEGFVPTIDIYHAFFRFVENEG---AI 433
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
++ K + GC ++ Y + +RR + LW++M++ + +D I+ ++ G
Sbjct: 434 CKLFDKMFENGCAPTMETYIMSIRRCCSWSDYENAFKLWNDMEKHWFSADSSIHYLLLNG 493
Query: 487 LCNIGQLENAVLVMEESLRKGF 508
G+ E A E GF
Sbjct: 494 FLLNGKPEEACKCYREMKVNGF 515
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 455 FGKCGMLLD------LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+G C + +D LW EM D Y VI G+ + V + +E +KGF
Sbjct: 284 YGWCNIFVDVYQVKRLWEEMSNLCITPDAFSYTTVICCFSKAGKFYDVVRLYDEMKKKGF 343
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P+ VY+ + L ++ A NLF KI+
Sbjct: 344 TPNLKVYNAVIYVLSKERCVKEALNLFNKIR 374
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 200/452 (44%), Gaps = 31/452 (6%)
Query: 100 ERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNV 159
++ RG+F + + W D D+ +++ + +G+ + WAI N+
Sbjct: 28 DQARGLFFEMQE---------WRCKPDA--DIYNSLIHAHSRAGQ-----WRWAI---NI 68
Query: 160 AKDV---------KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR 210
+D+ +YN ++ A G + + M + GV PDL T +IV+ +
Sbjct: 69 MEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKN 128
Query: 211 AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM---KGKVLFNV 267
Q KAI ++ + D +LN+++ CL + G A LFNSM + K +V
Sbjct: 129 GAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDV 188
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TY ++ + GQV + + +VAEG P+ + ++ L+ G +A+ +F+
Sbjct: 189 VTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNL 248
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
+K+ G PD +Y ++++ Y ++ + + M +C+PN +Y LI +
Sbjct: 249 IKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGM 308
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A+ + EM GI P +I++ L + + AR G L+ AY
Sbjct: 309 LKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNS 368
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
++ FG L+L+ M+ES D Y +I+G +G+ ++ E+ +
Sbjct: 369 GIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSK 428
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ VYS L + KL A + F +K
Sbjct: 429 VSSTKEVYSSLIYSYIKQGKLSEAESTFSSMK 460
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 177/397 (44%), Gaps = 8/397 (2%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
+ + +KG V D +L+++ + + GEA+ LF + + DV +
Sbjct: 138 YFEIMKGANVTSDTF-------TLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVT 190
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y I+ + + + M EGV P++ + ++ ++ G +A+ + ++
Sbjct: 191 YTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIK 250
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVV 284
GL+ D S +L + A +FN MK N ++YN +I + G +
Sbjct: 251 KNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLK 310
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E +L E+ +G PD ++ S L+ GR +I + + + +G +T AYN+ I
Sbjct: 311 EAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGI 370
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+Y+S GD+++ ++ Y M N +P+ TY LISG K K ++L FE+M+D +
Sbjct: 371 KSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVS 430
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
+ +S + G A + +K GC + Y L++ + G DL
Sbjct: 431 STKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDL 490
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ EM+ +G P D I ++ G+ E + +ME
Sbjct: 491 FKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLME 527
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 115/275 (41%), Gaps = 8/275 (2%)
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
Y ++I +++ QV + + E+ PD+ ++ LI RAG+ AI + + M
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
P YN VI+ + G++ + ++ K M+ P++ T+ ++S L + +
Sbjct: 74 RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK--KARKVGCKLSLTAYKL 447
A+ FE M + T T+ + L G A+ ++ + R+ C + Y
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTS 193
Query: 448 LLRRLSGFGK---CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
++ +G+ C + DL M G + Y ++ + G A+ +
Sbjct: 194 IMHSYCIYGQVENCKAIFDL---MVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIK 250
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ G P + Y+ L N S + E A +F K+K
Sbjct: 251 KNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMK 285
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 130/313 (41%), Gaps = 37/313 (11%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN +K+ ++ + + M + V PD T +I++ + G+ ++++ +
Sbjct: 365 AYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDM 424
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
D + E + +++ ++ + A S F+SMK F +V+TY +I ++ G
Sbjct: 425 VDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGW 484
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ KE+ G PD++ S L+E + G + +++ + MK+K + +Y +
Sbjct: 485 KRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEI 544
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I++ + D+ + ++ +E + L
Sbjct: 545 IASCTMIRDW--------------------------------KTASEMIEYLDSSLSS-- 570
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
S GT+ L L G M ++ K + L+ Y ++LR L GK ++
Sbjct: 571 -ISVGTLNHVLNFLGKCGKTENMMKLFYKMVTSCSTVGLSTYAVVLRNLLVVGKWRKYIE 629
Query: 464 LWHEMQESG-YPS 475
+ M++SG +P+
Sbjct: 630 VLQWMEDSGVHPT 642
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 182/380 (47%), Gaps = 4/380 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K N+ +V + N++V AL + D + LS+M ++GV DL T + +++++ R G
Sbjct: 216 VKSGNIV-NVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGL 274
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
V +A ++ + GLK + N ++ LC+ A + + M G L N T+N
Sbjct: 275 VSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNP 334
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
++ + V E ERV E++ G PD ++FS ++ R G + A+ F+ MK G
Sbjct: 335 MLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVG 394
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PDT Y +I+ Y D +K M C ++ TY L++GL + + + DA
Sbjct: 395 LVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDAD 454
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
E+F+EM++RG+ P T+T+ + C G A+ +++ K + Y L+
Sbjct: 455 ELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGF 514
Query: 453 SGFGKCGMLLDLWHEM-QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
G+ +LW++M +PS + +I G C++G + A + +E KG P+
Sbjct: 515 CKVGEMEKAKELWYDMISREIFPSYIS-FSILINGFCSLGLVSEAFRLWDEMKEKGIKPT 573
Query: 512 RLVYSKLSNKLLASNKLESA 531
+ + + L + L A
Sbjct: 574 LVTCNTIIKGYLRAGNLSKA 593
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 166/350 (47%), Gaps = 3/350 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V ++M + GV PDL + S ++ F R G++ +A+ +++ GL D +++ C
Sbjct: 351 VFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYC 410
Query: 245 QRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
+ V A + N M +G V+ +V+TYN +++G + + + + + KE+V G PD
Sbjct: 411 RNDDVSGALKMRNEMVERGCVM-DVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDF 469
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
T + LI G + G + A+ +F+TM + PD YN ++ + VG+ ++ + +
Sbjct: 470 YTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYD 529
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M S P+ +++ LI+G V++A +++EM ++GI P+ T + ++ G
Sbjct: 530 MISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGN 589
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A G Y L+ L + M+E G + Y
Sbjct: 590 LSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNA 649
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
++ G G+++ A +V+ + + KG P + Y+ L N ++ + ++ A+
Sbjct: 650 ILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAF 699
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 195/437 (44%), Gaps = 12/437 (2%)
Query: 104 GVFLQKLKGKGVIEDAL-WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKD 162
GV+L +++ KGV D + +N +V RG L EA L A K +
Sbjct: 244 GVYLSEMEEKGVYADLVTYNT-------LVNAYCRRG-LVSEAFGLVDCMAGK--GLKPG 293
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ +YN ++ L + ++ VL +M G+ P+ T + ++ R V++A ++
Sbjct: 294 LFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFN 353
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLG 281
+ G+ D S + ++ + +G A + F MKG L + + Y I+I+G+ +
Sbjct: 354 EMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRND 413
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
V ++ E+V G D +T++ L+ GL R +DDA E+F M E+G PD
Sbjct: 414 DVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLT 473
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I Y G+ + + ++ M+ + +P++ TY L+ G K ++ A E++ +M+ R
Sbjct: 474 TLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISR 533
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
I PS + + + CS G A ++ + ++ G K +L +++ G
Sbjct: 534 EIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKA 593
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
D + M G P D Y +I + A ++ +G P+ + Y+ +
Sbjct: 594 NDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGG 653
Query: 522 LLASNKLESAYNLFRKI 538
+++ A + K+
Sbjct: 654 FSRHGRMQEAEMVLHKM 670
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 166/410 (40%), Gaps = 88/410 (21%)
Query: 106 FLQKLKGKGVIEDA-LWNVNVD---LSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAK 161
+ +K+KG G++ D ++ + ++ + DV G + R + V+
Sbjct: 386 YFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVM------------- 432
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN ++ L R K D + +M + GV PD TL+ ++ + + G + KA+
Sbjct: 433 DVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKAL--- 489
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
SLF +M + L +V+TYN ++ G+ K+
Sbjct: 490 --------------------------------SLFETMTLRSLKPDVVTYNTLMDGFCKV 517
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ + + + ++++ P ++FS LI G G + +A ++D MKEKG P
Sbjct: 518 GEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTC 577
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I Y+ G+ + + M S P+ TY LI+ +K A + M +
Sbjct: 578 NTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEE 637
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
RG++P+ T + L +G A M
Sbjct: 638 RGLLPNLVTYNAILGGFSRHGRMQEAEM-------------------------------- 665
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
+ H+M + G D Y +I G + ++ A V +E L++GF P
Sbjct: 666 ---VLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVP 712
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 146/339 (43%), Gaps = 1/339 (0%)
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS-MKG 261
+++ ++++A ++ + + L G + N +L + + V A ++ +K
Sbjct: 159 LLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKS 218
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
+ NV T NI+++ K G++ + L E+ +G D +T++ L+ R G + +A
Sbjct: 219 GNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEA 278
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+ D M KG P YNA+I+ G ++ + M PN T+ ++
Sbjct: 279 FGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVE 338
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
+ V +A VF EML RG+VP + +S + G A+ ++K + VG
Sbjct: 339 SCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPD 398
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
Y +L+ L + +EM E G D Y ++ GLC L++A + +
Sbjct: 399 TVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFK 458
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
E + +G P + L + + A +LF + +
Sbjct: 459 EMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTL 497
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 91/237 (38%)
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+ F LI +A ++ + E F ++++G NA NA++ + VG D K Y+
Sbjct: 155 VVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYED 214
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
N+ T +++ L K K+ + EM ++G+ T + + C G
Sbjct: 215 FVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGL 274
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A + G K L Y L+ L G + EM G + +
Sbjct: 275 VSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNP 334
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ C + A V E L++G P + +S + + +L A F K+K
Sbjct: 335 MLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMK 391
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 177/378 (46%), Gaps = 1/378 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN+++ A R L M K G P L T S ++ +F G V +A ++
Sbjct: 312 DVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIF 371
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+++ GL + N ++ + V A+ L+ M+ K + + T+NI+++G K
Sbjct: 372 EGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKY 431
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ + + ++ PD + + GL AG++D+A++ + M EKG P A+
Sbjct: 432 GKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAF 491
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N+VI+ Y G D K YK M + P+ T + ++ GL K ++ +A ++ +M+D
Sbjct: 492 NSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMID 551
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G+ + T L+ G A ++ + G A+ + LS G
Sbjct: 552 KGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEE 611
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ + EM + G+ + +Y +I GLCN G+L A+ + E +KG P + + N
Sbjct: 612 AYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIIN 671
Query: 521 KLLASNKLESAYNLFRKI 538
+++SA++ F ++
Sbjct: 672 GFCKEGRMKSAFDAFAEM 689
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 172/376 (45%), Gaps = 1/376 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++N+++ ++ + ++L M K PD+ +I+++++ G+ A+ L +
Sbjct: 280 NFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLM 339
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
G K + + ++ C +V A +F ++ L NV YN ++SG+ K V
Sbjct: 340 IKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDV 399
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ + +E+ +G +PD TF+ L+ G + G+ D+ E+F PD + Y+
Sbjct: 400 CQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVS 459
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
++ G DE M++ + M P++ + +I+ ++ +A + ++ ML G+
Sbjct: 460 VAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGL 519
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
VPS+ T +S L L G A + K G ++ A+ +LL G
Sbjct: 520 VPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHS 579
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
LW+EM+ G D + I GL G +E A E +KGF P+ VY+ L + L
Sbjct: 580 LWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLC 639
Query: 524 ASNKLESAYNLFRKIK 539
KL A L R+++
Sbjct: 640 NCGKLHEALKLEREMR 655
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 170/392 (43%), Gaps = 39/392 (9%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
LF +W++ ++ D Y+V V L D L DM ++G+ P + + V+ +
Sbjct: 440 LFRDWSLS--SLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAA 497
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FN 266
+ RAG A + + FGL + + + +L L ++ + A L M K L N
Sbjct: 498 YSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVN 557
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
+ + +++ G+ K+G + E+ A G PD++ FS I+GL +AG +++A E F
Sbjct: 558 KVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFS 617
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M +KG P+ YN++I + G E +K + M P++ T +I+G K
Sbjct: 618 EMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEG 677
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
++ A + F EM G+ P T T + + C L + +
Sbjct: 678 RMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKV-------------------LDMVSAD 718
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L + M SG+ D Y I G C+ ++ AV +++E +
Sbjct: 719 EFLNK----------------MYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAV 762
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P+ + Y+ + N + ++ L+ A L K+
Sbjct: 763 GVVPNTVTYNTMMNA-VCTDMLDRAMVLTAKL 793
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 174/409 (42%), Gaps = 4/409 (0%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
++ N GN+ EA +F I+ ++ +V YN ++ + + + +M
Sbjct: 354 IITAFCNEGNVV-EARKIF--EGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMR 410
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+G+ PD T +I++ + G+ + ++ L D +V + LC +
Sbjct: 411 DKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLD 470
Query: 251 AASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A M K + +V+ +N VI+ +S+ G + K ++ G P S T S ++
Sbjct: 471 EAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSML 530
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
GL + GR+ +A ++ M +KG + A+ ++ Y VGD + M +
Sbjct: 531 LGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGIC 590
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P+ ++ I GL K+ V +A E F EM +G VP+ S + LC+ G H A+ +
Sbjct: 591 PDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKL 650
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
++ R+ G + +++ G+ D + EM G D Y +I G C
Sbjct: 651 EREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCK 710
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ + +A + + G+ P Y+ +S K+ A + ++
Sbjct: 711 VLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDEL 759
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 143/322 (44%), Gaps = 34/322 (10%)
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
D L+ +M F+ + Y+++++L R+ + G++ + +++++
Sbjct: 207 DFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILF---------------- 250
Query: 257 NSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
++L V Y V W ++L+ ++ +G P + F+ +I + G
Sbjct: 251 -----RLLLRVGDYGSV---W----------KLLRGMIRDGPRPCNHNFNIMILCFCQKG 292
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
+ A + M + C PD AYN +I+ Y G + + + M C+P++ T++
Sbjct: 293 YLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFS 352
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+I+ V +A ++FE + + G+ P+ + + A M+Y++ R
Sbjct: 353 TIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDK 412
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G + +L+ +GK +L+ + S D +Y+ +AGLC GQL+ A
Sbjct: 413 GIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEA 472
Query: 497 VLVMEESLRKGFCPSRLVYSKL 518
+ +E+ L KG PS + ++ +
Sbjct: 473 MQFLEDMLEKGMPPSVVAFNSV 494
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/503 (22%), Positives = 228/503 (45%), Gaps = 33/503 (6%)
Query: 64 QISSHNSFPNV---YKESRSNSVKRIDSSRAVD--EFLLPEERLRGVFLQK--------- 109
Q S + PN + +V+R+ ++ +D ++ L E RLRGV +
Sbjct: 40 QERSRSPAPNAGEALARAHEATVRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICA 99
Query: 110 LKGKGVIEDAL---WNVNVDL-----SLDVVGKVVN---RGNLSGEAMVLFFNWAIKHPN 158
G + AL + DL ++ V +++ R NL + ++ N ++
Sbjct: 100 FARAGAADRALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDN--MRKAG 157
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V +V +YN+++KAL + +L +MA++G PD + + ++ + + ++ +A
Sbjct: 158 VEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEAR 217
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+L + G S N V+ LC + + + + M + L + + Y ++ +
Sbjct: 218 GILAEMTPVG-----ASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAF 272
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K ++ +L +V EG P+ TF+ L++G G++ DA+ +++ M +G P T
Sbjct: 273 CKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPST 332
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+YN +I +GD + + M +C P++ TY+ LI G K+ + A+ ++ +
Sbjct: 333 ISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWND 392
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M + G P+ T+ ++ LC A + K C + + L+R L G+
Sbjct: 393 MTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGR 452
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
G L+++H M+ G P + Y ++ GL G E+A+ ++ E L GF S + Y+
Sbjct: 453 AGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNT 512
Query: 518 LSNKLLASNKLESAYNLFRKIKI 540
+ L ++ A L ++ I
Sbjct: 513 TISGLCQMRMIKEAMILLGRMII 535
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 166/364 (45%), Gaps = 1/364 (0%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H + D +Y IV A + + C +L+ M EG P+++T ++++ F G+V+
Sbjct: 255 HRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVH 314
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVI 274
A+ M + G S NV++ LC + A +F+ M K L +V TY+ +I
Sbjct: 315 DALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLI 374
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+SK G + + ++ G P+ + ++ +++ L + D A + D M + C
Sbjct: 375 DGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCP 434
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+T +N +I + +G + + GM Y C PN TY L+ GL + DAL +
Sbjct: 435 PNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRM 494
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
EML+ G S + + + LC AM++ + G + + ++
Sbjct: 495 LTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCK 554
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G + M P + Y +++GLC+ +L++A++ + + L +G CP+
Sbjct: 555 EGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEAT 614
Query: 515 YSKL 518
++ L
Sbjct: 615 WNVL 618
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 150/348 (43%), Gaps = 12/348 (3%)
Query: 89 SRAVDEFLLPEERLRGVFLQKLKGKGVIEDAL----WNVNVDLSLDVVG-KVVNRG--NL 141
+R V E +P + V ++ G + DAL W V + + V+ RG ++
Sbjct: 286 ARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHI 345
Query: 142 SGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
LF + + DV++Y+ ++ + D ++ +DM G P++
Sbjct: 346 GDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVY 405
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+ ++D + +A ++ ++ + + N ++ LC G A ++F+ M+
Sbjct: 406 TNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRR 465
Query: 262 -KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
N TYN ++ G + G + R+L E++ GF ++++ I GL + I +
Sbjct: 466 YGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKE 525
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A+ + M +G PD +NA+I Y G+ M + NC N+ YT L+S
Sbjct: 526 AMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMS 585
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGT----ITSFLEPLCSYGPPH 424
GL K+ DA+ +ML GI P+ T + L + GP H
Sbjct: 586 GLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGIFTHLGTIGPMH 633
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 104/240 (43%), Gaps = 1/240 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V Y +V L ++ FD N++ M+ E P+ T + ++ S G+ +A+ +
Sbjct: 401 NVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVF 460
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
+ +G + + N +L L + + A + M ++++YN ISG ++
Sbjct: 461 HGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQM 520
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ E +L ++ +G PD+ TF+ +I + G + A + M C + AY
Sbjct: 521 RMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAY 580
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+++S S D+ M Y M PN T+ L+ G+ + + + +++
Sbjct: 581 TSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGIFTHLGTIGPMHLIDHIIE 640
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 162/356 (45%), Gaps = 1/356 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
VL +M EG+ PD + ++D F + G V A ++ ++ + D + V+ LC
Sbjct: 245 VLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLC 304
Query: 245 QRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
Q V A LF+ M K L + +TY +I G+ K G++ E + +++ G +P+ +
Sbjct: 305 QTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIV 364
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T++ L +GL + G +D A E+ M KG + YN++++ G+ D+ +K K M
Sbjct: 365 TYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDM 424
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
P+ TYT L+ KSR++ A E+ +MLDR + P+ T + C G
Sbjct: 425 EVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGML 484
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
+ K + G + T Y L+++ +++ M G DG Y +
Sbjct: 485 EDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNIL 544
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I G C ++ A + + + KGF + Y+ L K A LF +++
Sbjct: 545 IKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMR 600
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 130/271 (47%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N TYN VI K G+V E ERVL+E+++EG +PD + ++ LI+G + G + A +F
Sbjct: 222 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 281
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M+++ PD Y AVI G E K + M EP+ TYT LI G K
Sbjct: 282 DEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKE 341
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
K+ +A + +ML G+ P+ T T+ + LC G A + + + G +L++ Y
Sbjct: 342 GKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTY 401
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ L G + L +M+ +G+ D Y ++ C ++ A ++ + L
Sbjct: 402 NSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLD 461
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
+ P+ + ++ L N S LE L +
Sbjct: 462 RELQPTVVTFNVLMNGFCMSGMLEDGEKLLK 492
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 122/249 (48%), Gaps = 5/249 (2%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PN+ +Y + L + D +L +M ++G+ ++ T + +++ +AG + +
Sbjct: 361 PNIV----TYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQ 416
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVIS 275
A++++ +E G DA + ++ C+ + A L M + L V+T+N++++
Sbjct: 417 AVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMN 476
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G+ G + + E++LK ++ +G P++ T++ LI+ + E++ M KG P
Sbjct: 477 GFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVP 536
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D N YN +I + + E ++ M + +Y LI G K +K +A E+F
Sbjct: 537 DGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELF 596
Query: 396 EEMLDRGIV 404
E+M G+V
Sbjct: 597 EQMRREGLV 605
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 130/301 (43%), Gaps = 43/301 (14%)
Query: 249 VGAASSLFNSMKG-KVLFNVMTYNIVISGWSK----LGQVVEMERVLK---EIVAEGFSP 300
V A LF+ M +L +V + N+ IS S+ + ++ E VLK E+ +G P
Sbjct: 162 VSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKP 221
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
+ T++ +I L + G++ +A V M +G PD Y +I + +G+ + +
Sbjct: 222 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 281
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
M P+ TYT +I GL ++ +V +A ++F EM+ + + P T T+ ++ C
Sbjct: 282 DEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKE 341
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
G A ++ + ++G ++ Y L
Sbjct: 342 GKMKEAFSLHNQMLQMGLTPNIVTYTAL-------------------------------- 369
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
GLC G+++ A ++ E RKG + Y+ L N L + ++ A L + +++
Sbjct: 370 ---ADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEV 426
Query: 541 A 541
A
Sbjct: 427 A 427
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 113/249 (45%), Gaps = 1/249 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
++ +YN +V L + D ++ DM G +PD T + +MD++ ++ ++ +A ++L
Sbjct: 397 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 456
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++ D L+ + NV++ C + L M K ++ N TYN +I +
Sbjct: 457 RQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIR 516
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ + + + A+G PD T++ LI+G +A + +A + M KG ++Y
Sbjct: 517 NNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSY 576
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
NA+I + F E + ++ M + + Y K+ LE+ +E ++
Sbjct: 577 NALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIE 636
Query: 401 RGIVPSTGT 409
+ +V T
Sbjct: 637 KCLVGDIQT 645
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 7/162 (4%)
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSY--GPPHA-----AMMMYKKARKVGCKL 440
V+ A ++F++ML+ G++ S + F+ L G A + + ++ + G K
Sbjct: 162 VSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKP 221
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+ Y ++ L GK + EM G DG IY +I G C +G + +A +
Sbjct: 222 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 281
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+E ++ P + Y+ + L + ++ A LF ++ R
Sbjct: 282 DEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 323
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 134/588 (22%), Positives = 256/588 (43%), Gaps = 79/588 (13%)
Query: 40 LSNQKKNMSSLDEHHVLKELSD---------LFQ-ISSHNSFPNVYKESRSNSVKRIDSS 89
L N++K+++ L E VL +L + F+ I++ NSF + + + +KR+
Sbjct: 28 LQNEQKDLNLLKESEVLNKLKNEPNILLALHFFKSIANSNSFKHT-PLTYTTMIKRLGYE 86
Query: 90 RAVD--EFLLPEERLRGV---------FLQKLKGKGVIEDAL------WNVNVDLSLDVV 132
R +D ++LL +L G+ + + G+ E AL S+ +
Sbjct: 87 RDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIY 146
Query: 133 GKVVNRGNLSGEAMVLFFNWA---IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDM 189
V++ L E N +K + +V +YN+++KAL + D +L++M
Sbjct: 147 NHVLDA--LLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEM 204
Query: 190 AKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHV 249
+ +G PD + + V+ S R G+V +A ++ R++ F N ++ C+ +
Sbjct: 205 SYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSF-----VPVYNALINGFCREHKM 259
Query: 250 GAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
LFN M + + +V+TY+ VI+ S++G V VL ++ G SP+ TF+ L
Sbjct: 260 EEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSL 319
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM----------- 357
++G GR+ +A+++++ M ++G P+T AYN +I S G E +
Sbjct: 320 MKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGV 379
Query: 358 ------------------------KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
+ + M + C PN+ YT ++ L ++ AL
Sbjct: 380 FPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALH 439
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+ E M + P+T T +F++ LC G AM + + R+ GC ++T Y +L L
Sbjct: 440 LIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLF 499
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
+ L + E++E S+ Y +++G C+ G + A+ + + L G P +
Sbjct: 500 NAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSI 559
Query: 514 VYSKLSNKLLASNKLESAYNLFRKIKIARQN-----DYARRLWRSKGW 556
Y+ + ++++A L ++ + Y LW W
Sbjct: 560 TYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNW 607
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 177/384 (46%), Gaps = 6/384 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
E LF A++ + DV +Y+ ++ L + VL+ M G +P++ T +
Sbjct: 261 EVFELFNEMAVE--GIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTS 318
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
+M + G++ +A+ + R+ G + + + N ++ LC + A S+ M+
Sbjct: 319 LMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNG 378
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+F N TY+ +I G++K G +V + +++ G P+ + ++ +++ L R + A+
Sbjct: 379 VFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHAL 438
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+ + M C P+T +N I G + MK M Y C PN+ TY ++ GL
Sbjct: 439 HLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGL 498
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+++ +AL++ E+ + I + T + L C G A+ + K G K
Sbjct: 499 FNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDS 558
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQE--SGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
Y ++ G+ + L + + GYP D Y ++ G+CN ++ AV+ +
Sbjct: 559 ITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYP-DVFTYTSLLWGVCNWIGVDEAVVHL 617
Query: 501 EESLRKGFCPSRLVYSKLSNKLLA 524
++ + +G CP+R ++ L L +
Sbjct: 618 DKMINEGICPNRATWNALVRGLFS 641
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 115/248 (46%), Gaps = 8/248 (3%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V Y +V L R F+ +++ +MA P+ T + + +G+ A+++L
Sbjct: 417 NVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVL 476
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKL 280
++ +G + + N VL L A + ++ ++ N++TYN ++SG+
Sbjct: 477 NQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHA 536
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG-PDTNA 339
G ++ +++ G PDS+T++ +I + G + AI++ D + +KG G PD
Sbjct: 537 GMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFT 596
Query: 340 YNAV---ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y ++ + N+I V DE + + M + PN T+ L+ GL + + +
Sbjct: 597 YTSLLWGVCNWIGV---DEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHLGPIHIVD 653
Query: 397 EMLDRGIV 404
+L G V
Sbjct: 654 NILANGKV 661
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 172/390 (44%), Gaps = 36/390 (9%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ SD+ K GV + T +I++ ++ +AI ++G+++DF D S N +L LC
Sbjct: 199 IFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLC 258
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
++ + A L MK +L N T+NI++SG+ KLG + E +V+ + PD
Sbjct: 259 KKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVW 318
Query: 304 TFSFLIEGLGRAGRIDDA-----------------------------------IEVFDTM 328
T++ LI GL + G+ID+A E+ D M
Sbjct: 319 TYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKM 378
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ KG P+ YN V+ Y+ G D + M P+ T+ LI+G K+ ++
Sbjct: 379 EGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRL 438
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
++A + +EM +G+ ++ T+ + L LC A + A K G + +Y L
Sbjct: 439 SEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTL 498
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ GK + LW EM+E Y +I GLC+ G+ + ++ + E L G
Sbjct: 499 IMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGL 558
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P Y+ + ++E A+ K+
Sbjct: 559 VPDETTYNTIILGYCREGQVEKAFQFHNKM 588
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 198/455 (43%), Gaps = 46/455 (10%)
Query: 122 NVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDF 181
NV+ + LDV+ K +G L+ EA L + +K+ + + ++N++V + +
Sbjct: 247 NVSYNTILDVLCK---KGKLN-EARDLLLD--MKNNGLLPNRNTFNILVSGYCKLGWLKE 300
Query: 182 MCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVL- 240
V+ MA+ V PD+ T ++++ + G++ +A ++ +E+ L D + N ++
Sbjct: 301 AAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLIN 360
Query: 241 WCL-CQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
C C G L + M+GK V N +TYN+V+ + K G++ L+++ GF
Sbjct: 361 GCFDCSSSLKGF--ELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGF 418
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG---------------CGP-------- 335
SPD +TF+ LI G +AGR+ +A + D M KG CG
Sbjct: 419 SPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYK 478
Query: 336 ------------DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
D +Y +I Y G E MK + M P++ TY +I GL
Sbjct: 479 LLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLC 538
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
S K +++ E+L+ G+VP T + + C G A + K K K L
Sbjct: 539 HSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLF 598
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
+LLR L G L L++ G D Y +I+GLC + E A ++ E
Sbjct: 599 TCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEM 658
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
K P Y+ + + L + +++ A +I
Sbjct: 659 EEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRI 693
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 172/393 (43%), Gaps = 24/393 (6%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V + +YNV+VK + D N L M + G +PD T + +++ + +AG++ +A
Sbjct: 383 VKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAF 442
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+M+ + GLK ++ +LN +L LC + A L +S + F + ++Y +I G+
Sbjct: 443 RMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGY 502
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G+ VE ++ E+ + P +T++ +I GL +G+ D +I+ + + E G PD
Sbjct: 503 FKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDE 562
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I Y G ++ +++ M + +P++ T L+ GL + AL++F
Sbjct: 563 TTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNT 622
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ +G T + + LC A + + + Y +L L+ G+
Sbjct: 623 WISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGR 682
Query: 458 CGMLLDLWHEMQESGYPSDGEI-----------------------YEYVIAGLCNIGQLE 494
+ + E G D I + I LC G+ +
Sbjct: 683 MKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYK 742
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
+A+ +++ES +KG + Y L L+ K
Sbjct: 743 DAMHMVQESTQKGITLHKSTYISLMEGLIKRRK 775
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 142/347 (40%), Gaps = 47/347 (13%)
Query: 234 ESLNVVL------WCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISG---WSKLGQV 283
+SL V+L + C R H A+ +FN MK L N++T N +I+ + V
Sbjct: 136 QSLRVILDTSIGAYVACNRPH--HAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSV 193
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ + +++ G ++ TF+ LI G ++ +AI + MK+ C PD +YN +
Sbjct: 194 YLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTI 253
Query: 344 -----------------------------------ISNYISVGDFDECMKYYKGMSSYNC 368
+S Y +G E + M+ N
Sbjct: 254 LDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNV 313
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P++ TY LI GL K K+ +A + +EM + ++P T + +
Sbjct: 314 LPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFE 373
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ K G K + Y ++++ GK + +M+ESG+ D + +I G C
Sbjct: 374 LIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYC 433
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
G+L A +M+E RKG + + + + + L KL+ AY L
Sbjct: 434 KAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLL 480
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF W K A D +YN I+ L + F+ ++L++M ++ + PD T +
Sbjct: 615 KALKLFNTWISKGK--AIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNA 672
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFG 228
++ + AG++ +A + + R+ + G
Sbjct: 673 ILSALADAGRMKEAEEFMSRIVEQG 697
>gi|225440005|ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
[Vitis vinifera]
Length = 763
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 203/431 (47%), Gaps = 14/431 (3%)
Query: 136 VNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
V G+ + + + FF W + D ++ I++ LGR + +L DM K+GV
Sbjct: 125 VLHGSRNSDHALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNHARCILLDMPKKGVE 184
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
D + +++DS+ +AG V +++++ ++++ G++ +S + + + +R A
Sbjct: 185 WDEDLFVLLIDSYGKAGIVQESVKVFQKMKELGVERTIKSYDALFKVILRRGRYMMAKRY 244
Query: 256 FNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
FN+M + V+ TYNI+I G+ +V R +E+ SPD +T++ +I G R
Sbjct: 245 FNAMLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYR 304
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
++++A + F MK + P +Y +I Y+SVG D+ ++ ++ M S+ +PN T
Sbjct: 305 IKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVT 364
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI-TSFLEPLCSYGPPHAAMMMYKKA 433
Y+ L+ GL K+ +A V +EM++R I P +I + C G AA + K
Sbjct: 365 YSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAM 424
Query: 434 RKVGCKLSLTAYKLLLRRLSGFG---KCGMLLDLWHEMQ-----ESGYPSDGEIYEYVIA 485
++ Y +L+ G + LLD E + ++ + Y +I
Sbjct: 425 IRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIE 484
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR---KIKIAR 542
LCN GQ A + + ++KG + ++ L ESA+ + + + ++ R
Sbjct: 485 YLCNSGQTSKAETLFRQLMKKG-VQDPIAFNNLIRGHSKEGAPESAFEILKIMGRREVPR 543
Query: 543 QNDYARRLWRS 553
+ D R L S
Sbjct: 544 EADAYRLLIES 554
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 175/423 (41%), Gaps = 46/423 (10%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K V + +KSY+ + K + RR + + M EGV P T +I++ F + +
Sbjct: 213 MKELGVERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSLK 272
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
V A + +++ + D + N ++ + + A F MKG+ + V++Y
Sbjct: 273 VETANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTT 332
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G+ +G+V + R+ +E+ + G P+++T+S L+ GL ++ +A V M E+
Sbjct: 333 MIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERY 392
Query: 333 CGP-DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
P D + + +I+ G D K M + Y LI KS A
Sbjct: 393 IAPKDNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRA 452
Query: 392 LEVFEEMLDRGIV---------PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+++ ++++++ I+ S+G +E LC+ G A ++++ K G + +
Sbjct: 453 VKLLDKLIEKEIILRPQNSLEMESSG-YNLIIEYLCNSGQTSKAETLFRQLMKKGVQDPI 511
Query: 443 T----------------------------------AYKLLLRRLSGFGKCGMLLDLWHEM 468
AY+LL+ G+ M
Sbjct: 512 AFNNLIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGM 571
Query: 469 QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
E+G+ D ++ V+ L G+++ A VM + KG + + +K+ LL +
Sbjct: 572 IENGHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHV 631
Query: 529 ESA 531
E A
Sbjct: 632 EEA 634
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 136/326 (41%), Gaps = 11/326 (3%)
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL--------EDFGLK 230
D +VL M + + + +++++F ++G +A+++L +L L+
Sbjct: 414 LDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLE 473
Query: 231 FDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVL 290
++ N+++ LC A +LF + K + + + +N +I G SK G +L
Sbjct: 474 MESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQDPIAFNNLIRGHSKEGAPESAFEIL 533
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
K + ++ + LIE + G DA D M E G PD++ + +V+ +
Sbjct: 534 KIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRSVMESLFED 593
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
G + M + NMD +++ LL V +AL + +++ G P
Sbjct: 594 GRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLMNNGCEPD---F 650
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
L LC+ G AA+ + + +S ++Y+ +L L GK + ++ +
Sbjct: 651 DGLLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLTAGKTLNAYSILCKIMQ 710
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENA 496
G +D + +I L G + A
Sbjct: 711 KGGATDWSSCKDLIRSLNEEGNTKQA 736
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 186/409 (45%), Gaps = 37/409 (9%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V + ++N++VK+L + + L +A+EG+ PD+ T + ++D++ +AG V KA
Sbjct: 380 VKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAF 439
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ + GLK D +LN VL+ LC+ A L +S + + + ++Y V++ +
Sbjct: 440 TLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAY 499
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K R+ +++ P T++ LI+GL R R+ +AI+ + + EKG PD
Sbjct: 500 FKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDE 559
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I Y GD + +++ M + +P++ T L++GL K+ AL++FE
Sbjct: 560 TTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFES 619
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+++G T + ++ +C G A+ + G + Y ++L LS G+
Sbjct: 620 WVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGR 679
Query: 458 CGMLLDLWHEMQESG-----------YPSDG-------------------------EIYE 481
++ H++ +SG PS E Y
Sbjct: 680 SEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYM 739
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
+ GLC GQL+ A V++E ++KG Y L L+ K ++
Sbjct: 740 ERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQKRQT 788
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 201/472 (42%), Gaps = 48/472 (10%)
Query: 113 KGVIEDALWNVNV----DLSLDVV--GKVVN---RGNLSGEAMVLFFNWAIKHPNVAKDV 163
KG + DAL ++ LS D V ++N R + GEA L +K +A
Sbjct: 221 KGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLAR--MKRDGIAPTQ 278
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK------- 216
+YN +V A R + V+ M G PDL T +++ +AG+V +
Sbjct: 279 PTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDE 338
Query: 217 -----------------------------AIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
A+++L + D G+K + N+V+ LC+
Sbjct: 339 MERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEG 398
Query: 248 HVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
+ A + + L +V+TYN +I + K G V + ++ E+V +G D+ T +
Sbjct: 399 KLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLN 458
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
++ L + R +DA E+ + ++G PD +Y V++ Y + + ++ + M
Sbjct: 459 TVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIER 518
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
P++ TY LI GL + ++ +A++ E++++G+VP T + C G A
Sbjct: 519 KLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENA 578
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ K + K + L+ L GK L L+ E G D Y +I
Sbjct: 579 FRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQS 638
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+C +G ++ A+ ++ KG P Y+ + + L + + E A+N+ K+
Sbjct: 639 MCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKL 690
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 187/451 (41%), Gaps = 74/451 (16%)
Query: 159 VAKDVKSYNVIVKALGRRK--FFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
V +++ N ++ AL R +V + + ++P+ T ++++ + G +
Sbjct: 167 VRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLAD 226
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVIS 275
A+ L ++ FGL DA + N +L C++ +G A +L MK + TYN ++S
Sbjct: 227 ALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVS 286
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID---------------- 319
+++LG + + +V++ + A GF PD T++ L GL +AG++D
Sbjct: 287 AFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTAL 346
Query: 320 --------------------DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
DA+ + + M++KG P +N V+ + G +E +
Sbjct: 347 PDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGK 406
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC- 418
+ ++ P++ TY LI K+ VA A + +EM+ +G+ T T+ + L LC
Sbjct: 407 LEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCK 466
Query: 419 ------------------------SYGP----------PHAAMMMYKKARKVGCKLSLTA 444
SYG P A+ ++ + + S++
Sbjct: 467 MKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIST 526
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y L++ L + +D +E+ E G D Y +I C G LENA + +
Sbjct: 527 YNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMV 586
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
F P + + L N L KL+ A LF
Sbjct: 587 ENSFKPDVVTCNTLMNGLCLHGKLDKALKLF 617
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 115/292 (39%), Gaps = 5/292 (1%)
Query: 252 ASSLFNSMKGK--VLFNVMTYNIVISGWSKLGQVVEMER--VLKEIVAEGFSPDSLTFSF 307
A+ L +S++ + V ++ N V+S S+ + V + ++ P+ TF+
Sbjct: 154 AAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNL 213
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
L+ G + DA+ TM+ G PD YN +++ + G E M
Sbjct: 214 LVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDG 273
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
P TY L+S + + A +V E M G P T LC G A
Sbjct: 274 IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAF 333
Query: 428 MMYKKARKVGCKLS-LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ + ++ L + Y L+ + L L EM++ G + V+
Sbjct: 334 RLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKS 393
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
LC G+LE A+ +E+ +G P + Y+ L + + + A+ L ++
Sbjct: 394 LCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 145/287 (50%), Gaps = 1/287 (0%)
Query: 254 SLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
SLF M+ + + +NV T +I+I+ + L V V + + GF PD + F+ LI+G+
Sbjct: 61 SLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGV 120
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
R G+ + A + M GC PD N+++ Y S G D+ K + M S +P++
Sbjct: 121 CRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDV 180
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
+Y+ I+G K K+ +A+E+F+EM RG+VP+ T + ++ LC P A ++++K
Sbjct: 181 YSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRK 240
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
G + AY LL G +L L+ EMQ D +Y +I G+C +
Sbjct: 241 MCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRK 300
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+++A V+ + +G P Y+ L + L + A LFRK++
Sbjct: 301 VKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKME 347
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 156/317 (49%), Gaps = 1/317 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V + ++++ D+ +V K G PD+ + ++D R G+ A +L
Sbjct: 74 NVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLL 133
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
+ G D + N ++ C + + +F+ M K L +V +Y+I I+G+ K+
Sbjct: 134 KEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKV 193
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
++ E + E+ G P+++T++ LI+ L +A R DA +F M G PD AY
Sbjct: 194 EKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAY 253
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ ++ + G+ DE + ++ M +P++ YT +I+G+ +SRKV DA EV ++
Sbjct: 254 STLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIV 313
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ P T T+ ++ LC G A+ +++K + GC +Y +LL+
Sbjct: 314 EGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTST 373
Query: 461 LLDLWHEMQESGYPSDG 477
++ L HEM + G+ +D
Sbjct: 374 VVQLIHEMADRGFYADA 390
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 162/366 (44%), Gaps = 3/366 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M P + + ++ S +R + + + +E G+K++ +L++++ C C H
Sbjct: 31 MLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHH 90
Query: 249 VGAASSLFN-SMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
V S+F ++K +V+ + +I G ++G+ +LKE+ G PD +T +
Sbjct: 91 VDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNS 150
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
L+ G G+ID ++F M KG PD +Y+ I+ Y V DE M+ + MS
Sbjct: 151 LMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRG 210
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
PN TY LI L ++ + DA +F +M G+ P ++ L+ C G +
Sbjct: 211 VVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEML 270
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+++++ ++ K L Y +++ + K ++ + G D Y ++ GL
Sbjct: 271 VLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGL 330
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYA 547
C G + A+ + + G P Y+ L L N + L ++A + YA
Sbjct: 331 CREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIH--EMADRGFYA 388
Query: 548 RRLWRS 553
+ R+
Sbjct: 389 DAVTRT 394
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 122/251 (48%), Gaps = 1/251 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV + N +++ + D + + M +G+ PD+ + SI ++ + + ++ +A+++
Sbjct: 144 DVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELF 203
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
+ G+ +A + N ++ LCQ L A LF M L +++ Y+ ++ G+ K
Sbjct: 204 DEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQ 263
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + EM + +E+ PD + ++ +I G+ R+ ++ DA EV + +G PD + Y
Sbjct: 264 GNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTY 323
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
A++ G E ++ ++ M C P +Y L+ G L+ + +++ EM D
Sbjct: 324 TALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMAD 383
Query: 401 RGIVPSTGTIT 411
RG T T
Sbjct: 384 RGFYADAVTRT 394
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 81/166 (48%), Gaps = 3/166 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A VLF ++ D+ +Y+ ++ ++ D M + +M + V PDL +I
Sbjct: 233 DAQVLFRKMC--ACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTI 290
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
+++ R+ +V A ++L RL GLK D + ++ LC+ + A LF M +
Sbjct: 291 IINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDG 350
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
+ +YN+++ G + + +++ E+ GF D++T +FL
Sbjct: 351 CMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVTRTFL 396
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
+GNL E +VLF ++ V D+ Y +I+ + R + VLS + EG+ PD
Sbjct: 263 QGNLD-EMLVLF--QEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPD 319
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ T + ++D R G + +A+++ ++E+ G + S NV+L Q L +
Sbjct: 320 VHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIH 379
Query: 258 SM 259
M
Sbjct: 380 EM 381
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 162/380 (42%), Gaps = 42/380 (11%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ +V SYN I+ R+ + C V +M G P+ T +I+MD + + G + A
Sbjct: 280 ISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAF 339
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+ R++D + +L +++ LC+ LFN + + M YN +I G+
Sbjct: 340 SIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGF 399
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G + V +E+ G +P ++T++ LI+G + ID A+++ + MK KG D
Sbjct: 400 IKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDI 459
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
AY +I + D + + PN Y +I+G V +A++++++
Sbjct: 460 KAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKK 519
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M++ GI T TS ++ G K
Sbjct: 520 MVNEGIPCDLKTYTSLID--------------------------------------GLLK 541
Query: 458 CGMLL---DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G LL D+ EM G D + +I GLCN GQ ENA ++E+ K PS L+
Sbjct: 542 SGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLI 601
Query: 515 YSKLSNKLLASNKLESAYNL 534
Y+ L L+ A+ L
Sbjct: 602 YNTLIAGHFKEGNLQEAFRL 621
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 171/356 (48%), Gaps = 4/356 (1%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVL--WC 242
+++++++ G+ P+ T S+++D + G + KA + ++ G++ SLN +L +
Sbjct: 167 LVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYL 226
Query: 243 LCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
CQ A ++FN L NV T+N ++S K G++ E + E++A+G SP+
Sbjct: 227 KCQSWQ--NAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNV 284
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
++++ +I G R I+ A +V+ M + G P+ + ++ Y GD + +
Sbjct: 285 VSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHR 344
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M N P T +I GL K+ + + ++F + + +G VP+ + ++ G
Sbjct: 345 MKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGN 404
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
+ A +Y++ +VG S Y L+ + L L ++M+ G D + Y
Sbjct: 405 INLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGT 464
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+I G C +++A ++ E G P+R +Y+ + N +E A +L++K+
Sbjct: 465 LIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKM 520
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 127/245 (51%), Gaps = 1/245 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN I+ + + NV +M + G+ P T + ++D F + + A+++L ++
Sbjct: 392 YNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMK 451
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVV 284
GLK D ++ ++ C+R + +A L N ++G L N YN +I+G+ + V
Sbjct: 452 RKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVE 511
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E + K++V EG D T++ LI+GL ++GR+ A ++ M KG PD A+ +I
Sbjct: 512 EAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLI 571
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ + G F+ K + M+ N P++ Y LI+G K + +A + +EMLDRG+V
Sbjct: 572 NGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLV 631
Query: 405 PSTGT 409
P T
Sbjct: 632 PDNIT 636
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 115/486 (23%), Positives = 204/486 (41%), Gaps = 53/486 (10%)
Query: 98 PEERLRGVFLQKLKGKGVIE-----DALWNVNVDLSLDVVGKVVN----RGNLSGEAMVL 148
PE V +K V E D + N ++L V ++ +GNL A+VL
Sbjct: 109 PEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLR-SALVL 167
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
I + + +Y+V++ + + S+M +G+ + +L+ +++ +
Sbjct: 168 V--NEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGY 225
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNV 267
++ A M + GL + + N +L LC+ + A +L++ + K + NV
Sbjct: 226 LKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNV 284
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
++YN +I G + + +V KE++ GF+P+++TF+ L++G + G I++A +F
Sbjct: 285 VSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHR 344
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
MK+ P +I G E + S P Y +I G +K
Sbjct: 345 MKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGN 404
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ A V+ EM + GI PST T TS ++ C A+ + ++ G K+ + AY
Sbjct: 405 INLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGT 464
Query: 448 LL-----RR---------------------------LSGFGKCGML---LDLWHEMQESG 472
L+ RR ++GF + +DL+ +M G
Sbjct: 465 LIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEG 524
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
P D + Y +I GL G+L A + E L KG P ++ L N L + E+A
Sbjct: 525 IPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENA- 583
Query: 533 NLFRKI 538
RKI
Sbjct: 584 ---RKI 586
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 157/355 (44%), Gaps = 2/355 (0%)
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
DM G + +L + +M + G + A+ ++ + + GL + + +V++ C+
Sbjct: 135 DMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNG 194
Query: 248 HVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
++ A ++ MK K + +V + N ++ G+ K + + + G + + TF+
Sbjct: 195 NIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFN 253
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
L+ L + G++++A ++D + KG P+ +YN +I + + + K YK M
Sbjct: 254 TLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDN 313
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
PN T+T L+ G K + +A +F M D I+P+ T+ ++ LC G
Sbjct: 314 GFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEG 373
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
++ K G + Y ++ G + +++ EM E G Y +I G
Sbjct: 374 RDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDG 433
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
C ++ A+ ++ + RKG Y L + ++SA+ L +++ A
Sbjct: 434 FCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGA 488
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 158/379 (41%), Gaps = 35/379 (9%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
++ N+++ A+ R+ + + M GV D TL +++ + ++ G + +A Q
Sbjct: 5 IQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFL 64
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQ 282
+ + G++ D E+ ++ + LC + + G A SL
Sbjct: 65 QAKARGVELDQEAYSIFVHLLCLKPNSGYALSL--------------------------- 97
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
L+E+ A G+ P TF+ +I + G + +A+ + D M G + +
Sbjct: 98 -------LREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATS 150
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
++ Y G+ + +S PN TY+ LI G K+ + A E + EM +G
Sbjct: 151 LMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKG 210
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
I S ++ S LE A M+ A + G T + LL L GK
Sbjct: 211 IRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFT-FNTLLSWLCKEGKMNEAC 269
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+LW E+ G + Y +I G C + A V +E L GF P+ + ++ L +
Sbjct: 270 NLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGY 329
Query: 523 LASNKLESAYNLFRKIKIA 541
+E+A+++F ++K A
Sbjct: 330 FKKGDIENAFSIFHRMKDA 348
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 192/405 (47%), Gaps = 27/405 (6%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV +Y +++ R++ +LS M EG P + ++ ++ R+G
Sbjct: 332 PNVV----TYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSY 387
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLC--QRLHVGAASSLFNSMKGKVL-FNVMTYNIV 273
A ++L ++ D G + N+++ +C ++L L G++L +V+ +
Sbjct: 388 AYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVN 447
Query: 274 ISGWSKL----GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
+S ++ G+ + +++E++++GF PD+ T+S +I L A ++D+A +F+ MK
Sbjct: 448 VSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMK 507
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
PD Y +I ++ VG + K++ M C PN+ TYT LI LK+RK++
Sbjct: 508 SNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMS 567
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR--------KVGCKL- 440
A E+FE ML G +P+ T T+ ++ C G A +Y + R + K+
Sbjct: 568 SANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKID 627
Query: 441 -------SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
++ Y L+ L K DL M G + +Y+ +I G C +G+L
Sbjct: 628 DGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKL 687
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ A +V + +G+ P+ YS L ++L +L+ A + ++
Sbjct: 688 DEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRM 732
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 167/381 (43%), Gaps = 34/381 (8%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR-------RKFFDFMC 183
V+G + N + A +LF +K +V DV +Y +++ + + RK+FD
Sbjct: 486 VIGLLCNASKVD-NAFLLF--EEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFD--- 539
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
+M ++G P++ T + ++ ++++A ++ A ++ + G + + ++
Sbjct: 540 ----EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595
Query: 244 CQRLHVGAASSLFNSMKGKVLF-----------------NVMTYNIVISGWSKLGQVVEM 286
C+ + A ++ M+G N+ TY ++ G K +V E
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEA 655
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
+L + EG P+ + + LI+G + G++D+A VF M E+G GP+ Y+++I
Sbjct: 656 RDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDR 715
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
D +K M +C PN+ YT +I GL K K +A + M ++G P+
Sbjct: 716 LFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPN 775
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
T T+ ++ G + + ++ GC + Y++L+ G L
Sbjct: 776 VVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLD 835
Query: 467 EMQESGYPSDGEIYEYVIAGL 487
EM+++ +P Y VI G
Sbjct: 836 EMKQTYWPKHMAGYRKVIEGF 856
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 159/381 (41%), Gaps = 52/381 (13%)
Query: 211 AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMT 269
AG+ KA ++ + G D + + V+ LC V A LF MK V+ +V T
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
Y I+I + K+G + + + E+V +G +P+ +T++ LI +A ++ A E+F+ M
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYY---KG------------------------ 362
+GC P+ Y A+I + G ++ + Y +G
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIF 637
Query: 363 ------------------------MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
MS CEPN Y LI G K K+ +A VF +M
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+RG P+ T +S ++ L A+ + + + C ++ Y ++ L GK
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
L M+E G + Y +I G G+++ + +M + KG P+ + Y L
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817
Query: 519 SNKLLASNKLESAYNLFRKIK 539
N A+ L+ A+ L ++K
Sbjct: 818 INHCCAAGLLDDAHQLLDEMK 838
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 157/378 (41%), Gaps = 8/378 (2%)
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
K NV+++ R ++ L + G P T + ++ F+ A ++ A +
Sbjct: 198 KLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHRE 257
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQV 283
+ D G D +L + LC+ A +L + K+ + + Y +ISG +
Sbjct: 258 MSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKL--DTVIYTQMISGLCEASLF 315
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E L + + P+ +T+ L+ G R ++ + M +GC P +N++
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSL 375
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA--DALEVFE----E 397
I Y GD+ K K M C+P Y LI G+ + K+ D LE+ E E
Sbjct: 376 IHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGE 435
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
MLD +V + +++ LC G A + ++ G + Y ++ L K
Sbjct: 436 MLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASK 495
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L+ EM+ + D Y +I C +G L+ A +E +R G P+ + Y+
Sbjct: 496 VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTA 555
Query: 518 LSNKLLASNKLESAYNLF 535
L + L + K+ SA LF
Sbjct: 556 LIHAYLKARKMSSANELF 573
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 175/436 (40%), Gaps = 74/436 (16%)
Query: 123 VNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFM 182
+N L +DV+ V N E V FF WA + Y+ +++ LG
Sbjct: 127 LNETLVVDVLSLVKNP-----ELGVKFFIWAGRQIGYGHTGPVYHALLEVLG-------- 173
Query: 183 CN----VLSDMAKEGVNPDLETLSIVMDSFIRA----GQVYKAIQMLGRLEDFGLKFDAE 234
C V +E + D E L +++ IR G A++ LGRL+D G K
Sbjct: 174 CGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSR- 232
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
+TYN ++ + + ++ V +E+
Sbjct: 233 ---------------------------------LTYNALVRVFLEADRLDTAYLVHREMS 259
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
GF+ D T + L +AGR +A+ + + + K DT Y +IS F+
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFK---LDTVIYTQMISGLCEASLFE 316
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E M + M S +C PN+ TY L+ G L+ R++ + M+ G PS S +
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLI 376
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
C G A + KK GC+ Y +L+ + G K L L E+ E Y
Sbjct: 377 HAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVL--ELAEKAY- 433
Query: 475 SDGEIYEYVIA-----------GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
GE+ + + LC G+ E A ++ E + KGF P YSK+ L
Sbjct: 434 --GEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLC 491
Query: 524 ASNKLESAYNLFRKIK 539
++K+++A+ LF ++K
Sbjct: 492 NASKVDNAFLLFEEMK 507
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 162/385 (42%), Gaps = 16/385 (4%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN +V+ D V +M+ G N D TL + +AG+ +A+ ++ +
Sbjct: 234 TYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEK- 292
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
E+F K D ++ LC+ A + M+ + NV+TY I++ G + Q+
Sbjct: 293 EEF--KLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQL 350
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+R+L ++ EG P F+ LI R+G A ++ M + GC P YN +
Sbjct: 351 GRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNIL 410
Query: 344 ISNYI------SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
I S+ + K Y M + N + L L + K A + E
Sbjct: 411 IGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIRE 470
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ +G +P T T + + LC+ A +++++ + + Y +L + F K
Sbjct: 471 MMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTIL---IDSFCK 527
Query: 458 CGMLLDL---WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G+L + EM G + Y +I ++ +A + E L +G P+ +
Sbjct: 528 VGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVT 587
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
Y+ L + S ++E A ++ +++
Sbjct: 588 YTALIDGHCKSGQIEKACQIYARMR 612
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 127/281 (45%), Gaps = 46/281 (16%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y+ ++ + D V + M++ G P++ T S ++D + ++ A+++L R+
Sbjct: 674 YDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRML 733
Query: 226 DFGLKFDAESLNVVLWC-----LCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSK 279
+ ++ + NV+++ LC+ A L + M+ K NV+TY +I G+ K
Sbjct: 734 E-----NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGK 788
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK---------- 329
G+V + +++++ A+G +P+ +T+ LI AG +DDA ++ D MK
Sbjct: 789 AGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAG 848
Query: 330 -----------------------EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
E P AY +I ++ G + ++ +K MSS
Sbjct: 849 YRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSC 908
Query: 367 N--CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+ D Y+ LI L + KV A E++ +M+ RG +P
Sbjct: 909 TSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIP 949
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 106/238 (44%), Gaps = 38/238 (15%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ A +V Y ++ L + D ++S M ++G +P++ T + ++D F +AG+V K
Sbjct: 736 SCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKC 795
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-----------KVL-- 264
++++ ++ G + + V++ C + A L + MK KV+
Sbjct: 796 LELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEG 855
Query: 265 FN---------------------VMTYNIVISGWSKLGQV---VEMERVLKEIVAEGFSP 300
FN + Y I+I + K G++ +E+ + + + +
Sbjct: 856 FNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYS-AA 914
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
D +S LIE L A ++D A E++ M ++G P+ + + ++ I + ++E ++
Sbjct: 915 DKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQ 972
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 206/485 (42%), Gaps = 46/485 (9%)
Query: 58 ELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIE 117
E+ ++F++ S N+ +R S K S+R +DE + R+ +F K E
Sbjct: 31 EIVNMFRVPSMNNKMQNLPMNRKFSGKDT-STRKLDERFI---RILKIF----KWGPDAE 82
Query: 118 DALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRK 177
AL + + + +V +V+ + ++ + FF WA K N D S+ ++ +L
Sbjct: 83 KALEVLKLKVDHRLVHEVL-KIDVEINVKIQFFKWAGKRRNFEHDSSSFMALIHSLDEAG 141
Query: 178 FFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLN 237
F+ M + DM + I + + + +++LG+ +
Sbjct: 142 FYGEMWKTIQDMVRSST------------CVISSVYLSEIVKLLGKAK------------ 177
Query: 238 VVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAE 296
V A S+F +KG K TYN +I + G + ++ + E+ +
Sbjct: 178 ----------MVNKALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCND 227
Query: 297 GFS-PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
G PD++T+S LI G+ G D AI +FD MKE G P Y ++ Y + ++
Sbjct: 228 GNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEK 287
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+ K M C + TYT I GL K+ +V DA VF +M+ G P I S +
Sbjct: 288 ALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLIN 347
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE-MQESGYP 474
L G + +++K CK ++ Y +++ L W E M+ G
Sbjct: 348 ILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIA 407
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
Y +I G C ++E A+L++EE KGF P Y L N L + E+A L
Sbjct: 408 PSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANEL 467
Query: 535 FRKIK 539
F ++K
Sbjct: 468 FLELK 472
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 150/332 (45%), Gaps = 2/332 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +Y +K LG+ D V DM K+G PD+ ++ +++ + G++ +++
Sbjct: 304 VFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFR 363
Query: 223 RLEDFGLKFDAESLNVVLWCLCQ-RLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKL 280
++E + K + + N V+ L + + A+S F MKG + + TY+I+I G+ K
Sbjct: 364 KMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKT 423
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
++ + +L+E+ +GF P + LI LG+ R + A E+F +KE Y
Sbjct: 424 NRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVY 483
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+I ++ G E + + M +P++ Y L+SG++++ + +A + M +
Sbjct: 484 AVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDE 543
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G P + L L G P A+ M+ K + K +Y +L LS G
Sbjct: 544 NGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEE 603
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
L EM G+ + Y ++ + + +
Sbjct: 604 AAKLMREMNLKGFEYNNITYTSILEAVGKVDE 635
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN ++ + R D ++L M + G +PDL + +I+++ R G +AI+M
Sbjct: 514 DVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMF 573
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
+++ +K DA S N VL CL A+ L M K +N +TY ++ K+
Sbjct: 574 AKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITYTSILEAVGKV 633
Query: 281 GQ 282
+
Sbjct: 634 DE 635
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 190/444 (42%), Gaps = 68/444 (15%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D ++Y V++ R D +L +M + G+ +L + +++ + + G++++A
Sbjct: 294 LVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAE 353
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ R+ D+ LK D+ S N +L C+ H A +L + M + + V+TYN ++ G
Sbjct: 354 GVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGL 413
Query: 278 SKLGQ-----------------------------VVEMER------VLKEIVAEGFSPDS 302
++G + +ME + K+I+A GF+
Sbjct: 414 CRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSR 473
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+TF+ +I GL + G++ +A E+FD MK+ GC PD Y +I Y + + K
Sbjct: 474 ITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGA 533
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M P+++ Y LISGL KSR++ + ++ EM RG+ P+ T + ++ C G
Sbjct: 534 MEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGM 593
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE---- 478
A Y + + G ++ ++ L G+ L +M + G+ D E
Sbjct: 594 LDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLK 653
Query: 479 ----------------------------IYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
+Y IAGLC G++++A KGF P
Sbjct: 654 SDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVP 713
Query: 511 SRLVYSKLSNKLLASNKLESAYNL 534
Y L + A+ ++ A+ L
Sbjct: 714 DNFTYCTLIHGYSAAGNVDEAFRL 737
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 130/524 (24%), Positives = 221/524 (42%), Gaps = 51/524 (9%)
Query: 62 LFQ-ISSHNSF-PNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKG-VIED 118
FQ +S +F PNV +S V + R DE +L V L K K +G VI D
Sbjct: 54 FFQFVSKQQNFRPNV--KSYCKLVHILSRGRMYDETRAYLNQL--VDLCKFKDRGNVIWD 109
Query: 119 ALWNVNVDLSL-----DVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKAL 173
L V + + D++ KV L+ A+ +F N ++S N ++ L
Sbjct: 110 ELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMG--KCGRIPSLRSCNSLLNNL 167
Query: 174 GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA 233
+ V M + G+ PD+ +SI++++F + G+V +A + ++E+ G++ +
Sbjct: 168 VKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNI 227
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
+ + ++ V AA + M K V NV+TY ++I G+ K ++ E E+VL+
Sbjct: 228 VTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRG 287
Query: 293 IVAEG-FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG-------CG---------- 334
+ E PD + LI+G R G+IDDA+ + D M G C
Sbjct: 288 MQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRG 347
Query: 335 ------------------PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
PD+ +YN ++ Y G E M EP + TY
Sbjct: 348 EIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYN 407
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
L+ GL + DAL+++ M+ RG+ P ++ L+ L A ++K
Sbjct: 408 TLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILAR 467
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G S + ++ L GK +++ +M++ G DG Y +I G C + A
Sbjct: 468 GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQA 527
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
V R+ PS +Y+ L + L S +L +L ++ I
Sbjct: 528 FKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGI 571
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 110/500 (22%), Positives = 206/500 (41%), Gaps = 60/500 (12%)
Query: 35 SYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVDE 94
S N LL+N KN + H+V +++ + + P+V+ S V VDE
Sbjct: 159 SCNSLLNNLVKNGETHTAHYVYQQMIRVGIV------PDVFMVSIM--VNAFCKDGKVDE 210
Query: 95 FLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAI 154
F++K++ GV N+ ++ V+ G++ VL F +
Sbjct: 211 --------AAGFVKKMENLGV------EPNIVTYHSLINGYVSLGDVEAAKGVLKF---M 253
Query: 155 KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG-VNPDLETLSIVMDSFIRAGQ 213
V+++V +Y +++K ++ D VL M +E + PD +++D + R G+
Sbjct: 254 SEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK 313
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
+ A+++L + GLK N+ N +
Sbjct: 314 IDDAVRLLDEMLRLGLKT----------------------------------NLFICNSL 339
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
I+G+ K G++ E E V+ +V PDS +++ L++G R G +A + D M ++G
Sbjct: 340 INGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGI 399
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
P YN ++ VG FD+ ++ + M P+ Y+ L+ GL K A
Sbjct: 400 EPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGAST 459
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+++++L RG S T + + LC G A ++ K + +GC Y+ L+
Sbjct: 460 LWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYC 519
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
G + M+ E+Y +I+GL +L ++ E +G P+ +
Sbjct: 520 KASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIV 579
Query: 514 VYSKLSNKLLASNKLESAYN 533
Y L + L+ A++
Sbjct: 580 TYGALIDGWCKEGMLDKAFS 599
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 183/461 (39%), Gaps = 59/461 (12%)
Query: 118 DALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRK 177
+A+ +N S D+V V+ L+ A + FF + K N +VKSY +V L R +
Sbjct: 23 NAISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGR 82
Query: 178 FFD---FMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
+D N L D+ K F G V +++G +F F
Sbjct: 83 MYDETRAYLNQLVDLCK----------------FKDRGNVIWD-ELVGVYREFA--FSPT 123
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
+++L ++ A +F++M K + ++ + N +++ K G+ V +++
Sbjct: 124 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 183
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+ G PD S ++ + G++D+A M+ G P+ Y+++I+ Y+S+GD
Sbjct: 184 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 243
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLK----------------------------- 384
+ K MS N+ TYT LI G K
Sbjct: 244 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 303
Query: 385 -------SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
+ K+ DA+ + +EML G+ + S + C G H A + +
Sbjct: 304 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 363
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
K +Y LL G +L +M + G Y ++ GLC +G ++A+
Sbjct: 364 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 423
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ +++G P + YS L + L E A L++ I
Sbjct: 424 QIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 464
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 112/543 (20%), Positives = 209/543 (38%), Gaps = 85/543 (15%)
Query: 76 KESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDA------LWNVNVDLSL 129
K+ + + +++ + L+P+ER GV + G I+DA + + + +L
Sbjct: 274 KQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNL 333
Query: 130 DVVGKVVN----RGNLSGEAMVL--FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMC 183
+ ++N RG + V+ +W N+ D SYN ++ R
Sbjct: 334 FICNSLINGYCKRGEIHEAEGVITRMVDW-----NLKPDSYSYNTLLDGYCREGHTSEAF 388
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
N+ M +EG+ P + T + ++ R G A+Q+ + G+ D + +L L
Sbjct: 389 NLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGL 448
Query: 244 CQRLHVGAASSLFNSMKGKVLFNV-MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
+ + AS+L+ + + +T+N +ISG K+G++VE E + ++ G SPD
Sbjct: 449 FKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDG 508
Query: 303 LTFSFLIEGLGRAGRIDDA--------------------------------IEVFDTMKE 330
+T+ LI+G +A + A +EV D + E
Sbjct: 509 ITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTE 568
Query: 331 ---KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
+G P+ Y A+I + G D+ Y M+ N+ + ++SGL + +
Sbjct: 569 MGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGR 628
Query: 388 VADALEVFEEMLDRGIVPS---------------------TGTITSFLEP---------- 416
+ +A + ++M+D G P + +FL P
Sbjct: 629 IDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIA 688
Query: 417 -LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
LC G A + G Y L+ S G L EM G
Sbjct: 689 GLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVP 748
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ Y +I GLC ++ A + + +KG P+ + Y+ L + +++A+ L
Sbjct: 749 NIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLK 808
Query: 536 RKI 538
K+
Sbjct: 809 DKM 811
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 120/252 (47%), Gaps = 10/252 (3%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PN+ +Y ++ + D + +M + G++ ++ S ++ R G++ +
Sbjct: 576 PNIV----TYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDE 631
Query: 217 AIQMLGRLEDFGLKFDAESL--NVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVI 274
A ++ ++ D G D E + + + Q++ A SL S K +L N + YNI I
Sbjct: 632 ANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKI----ADSLDESCKTFLLPNNIVYNIAI 687
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G K G+V + R + +GF PD+ T+ LI G AG +D+A + D M +G
Sbjct: 688 AGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLV 747
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ YNA+I+ + D + + + PN+ TY LI G K + A ++
Sbjct: 748 PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKL 807
Query: 395 FEEMLDRGIVPS 406
++M++ GI PS
Sbjct: 808 KDKMIEEGISPS 819
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 163/386 (42%), Gaps = 33/386 (8%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
VA D Y+ ++ L + + F+ + D+ G T + ++ + G++ +A
Sbjct: 434 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 493
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
++ +++D G D + ++ C+ +VG A + +M+ + + ++ YN +ISG
Sbjct: 494 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGL 553
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K ++VE+ +L E+ G +P+ +T+ LI+G + G +D A + M E G +
Sbjct: 554 FKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANI 613
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSY----------------------------NCE 369
+ ++S +G DE + M + +C+
Sbjct: 614 IICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCK 673
Query: 370 ----PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
PN Y I+GL K+ KV DA F + +G VP T + + + G
Sbjct: 674 TFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDE 733
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A + + + G ++ Y L+ L L+H++ + G + Y +I
Sbjct: 734 AFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLID 793
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPS 511
G C IG ++ A + ++ + +G PS
Sbjct: 794 GYCKIGNMDAAFKLKDKMIEEGISPS 819
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 130/290 (44%), Gaps = 2/290 (0%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
A++ ++ ++ YN ++ L + + + ++L++M G+ P++ T ++D + + G
Sbjct: 533 AMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEG 592
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNI 272
+ KA + + GL + + ++ L + + A+ L M F +
Sbjct: 593 MLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP--DHEC 650
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+ + + ++ L E P+++ ++ I GL + G++DDA F + KG
Sbjct: 651 FLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG 710
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD Y +I Y + G+ DE + M PN+ TY LI+GL KS V A
Sbjct: 711 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQ 770
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+F ++ +G+ P+ T + ++ C G AA + K + G S+
Sbjct: 771 RLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 174/372 (46%), Gaps = 4/372 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++N ++ + D + M +G+ P +ET +I++D + R + Q+L +
Sbjct: 314 AFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEM 373
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
E+ G K + S ++ CLC+ + A + M G+ VL N YN++I G +G++
Sbjct: 374 EENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKL 433
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E R E+ G +T++ LI+GL + G++ +A E+F + G PD YN++
Sbjct: 434 REALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSL 493
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR-KVADALEVFEEMLDRG 402
IS Y + G+ +C++ Y+ M +P ++T+ LISG K K+ + L F EML
Sbjct: 494 ISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETL--FNEMLQMN 551
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
+ P + + G A + K+ +G + Y L+ GK
Sbjct: 552 LSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETK 611
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
DL +M+ G + + Y +I G C++ A + E L GF P+ + ++LS L
Sbjct: 612 DLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGL 671
Query: 523 LASNKLESAYNL 534
+L+ A ++
Sbjct: 672 RKDGRLQEAQSI 683
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 181/398 (45%), Gaps = 4/398 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A LF +++ N+ + ++N ++ + D + M KE V P + T +
Sbjct: 119 DAEKLFGEMSVR--NLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNS 176
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH-VGAASSLFNSMKGK 262
++ +A ++ +A ML ++ G D + +++ L + GAA L+ GK
Sbjct: 177 LLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGK 236
Query: 263 -VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
V + T +I+++G K G+V + E VLK +V G P + ++ ++ G + G +D A
Sbjct: 237 GVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRA 296
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
I + M+ +G P+ A+N+VI + + D+ ++ K M P+++TY LI G
Sbjct: 297 ILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDG 356
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
+ + ++ EEM + G P+ + S + LC G A M+ + G +
Sbjct: 357 YGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPN 416
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
Y +L+ GK L + EM ++G + Y +I GLC +G+L+ A +
Sbjct: 417 ANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFF 476
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G CP + Y+ L + + + L+ +K
Sbjct: 477 LITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMK 514
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 182/399 (45%), Gaps = 16/399 (4%)
Query: 145 AMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIV 204
AM LF +K V +V YNV++ L + K + +M+ + P+ T + +
Sbjct: 85 AMELF--ETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTL 142
Query: 205 MDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKV 263
+D + +AG+V AI + R++ ++ + N +L LC+ + A + N +K
Sbjct: 143 IDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGF 202
Query: 264 LFNVMTYNIVISGWSK----LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
+ + TY+I+ G K G +++ R E + +G D+ T S L+ GL + G+++
Sbjct: 203 VPDGFTYSIIFDGLLKSDDGAGAALDLYR---EAIGKGVKIDNYTCSILLNGLCKEGKVE 259
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
A EV ++ E G P YN +++ Y +GD D + + M S PN + +I
Sbjct: 260 KAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVI 319
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP---LCSYGPPHAAMMMYKKARKV 436
+ + + A E ++M+ +GI PS T ++ LC + + ++ +
Sbjct: 320 DKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVF---SRCFQILEEMEEN 376
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G K ++ +Y L+ L GK + +M G + IY +I G C +G+L A
Sbjct: 377 GEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREA 436
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ +E + G + + Y+ L L KL+ A +F
Sbjct: 437 LRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMF 475
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 166/358 (46%), Gaps = 6/358 (1%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
VL + + G+ P + +++ + + G + +AI + ++E GL+ + + N V+ C
Sbjct: 264 VLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFC 323
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ + A M GK + +V TYNI+I G+ +L ++L+E+ G P+ +
Sbjct: 324 EMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVI 383
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
++ LI L + G+I +A V M +G P+ N YN +I +VG E ++++ M
Sbjct: 384 SYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEM 443
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
S + TY LI GL K K+ +A E+F + G P T S + + G
Sbjct: 444 SKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNS 503
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD--LWHEMQESGYPSDGEIYE 481
+ +Y+ +K+G K ++ + L +SG K G+ L L++EM + D +Y
Sbjct: 504 QKCLELYETMKKLGLKPTINTFHPL---ISGCSKEGIKLKETLFNEMLQMNLSPDRVVYN 560
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I G ++ A + +E + G P Y+ L L KL +L +K
Sbjct: 561 AMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMK 618
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 165/361 (45%), Gaps = 4/361 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K V + ++N ++ L + + + +L+++ G PD T SI+ D +++
Sbjct: 162 MKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDD 221
Query: 214 -VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTY 270
A+ + G+K D + +++L LC+ V A + S+ G V V+ Y
Sbjct: 222 GAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVI-Y 280
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
N +++G+ ++G + ++++ + G P+ + F+ +I+ ID A E M
Sbjct: 281 NTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVG 340
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
KG P YN +I Y + F C + + M +PN+ +Y LI+ L K K+ +
Sbjct: 341 KGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILE 400
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A V +M+ RG++P+ ++ C+ G A+ + + K G ++ Y L++
Sbjct: 401 AEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIK 460
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
L GK +++ + +G+ D Y +I+G N G + + + E + G P
Sbjct: 461 GLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKP 520
Query: 511 S 511
+
Sbjct: 521 T 521
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 155/352 (44%), Gaps = 37/352 (10%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M +EG P + ++++S + + + + + + G + D + +
Sbjct: 22 MRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGD 81
Query: 249 VGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ A LF +MK KV+ NV YN++I G K ++ + E++ E+ P+ +TF+
Sbjct: 82 LKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNT 141
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI+G +AG +D AI + + MK++
Sbjct: 142 LIDGYCKAGEVDVAIGLRERMKKE-----------------------------------K 166
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC-SYGPPHAA 426
EP++ T+ L+SGL K+R++ +A + E+ G VP T + + L S AA
Sbjct: 167 VEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAA 226
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ +Y++A G K+ +LL L GK ++ + E G IY ++ G
Sbjct: 227 LDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNG 286
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
C IG ++ A+L +E+ +G P+ + ++ + +K ++ A +K+
Sbjct: 287 YCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKM 338
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 146/301 (48%), Gaps = 13/301 (4%)
Query: 105 VFLQKLKGKGVIEDA-LWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDV 163
+ L+ + G+GV+ +A ++N+ +D S VGK+ + FF+ K+ + +
Sbjct: 403 MVLRDMVGRGVLPNANIYNMLIDGSC-TVGKL--------REALRFFDEMSKN-GIGATI 452
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+YN ++K L + + + G PD+ T + ++ + AG K +++
Sbjct: 453 VTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYET 512
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQ 282
++ GLK + + ++ C + + +LFN M + + + + YN +I + + G
Sbjct: 513 MKKLGLKPTINTFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGH 571
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V + + KE+V G PD+ T++ LI G + G++ + ++ D MK KG P+ + Y+
Sbjct: 572 VQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSL 631
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I + + DF+ +Y+ M PN+ L +GL K ++ +A + EM+ G
Sbjct: 632 LIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANG 691
Query: 403 I 403
+
Sbjct: 692 M 692
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 39/275 (14%)
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
QV E+ +++ EG P ++E L + + D+ +++F M G PD Y
Sbjct: 14 QVSELYDFMRQ---EGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYG 70
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+ + +GD M+ ++ M PN+ Y LI GL K +++ DA ++F EM R
Sbjct: 71 RAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVR 130
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL------RRL--- 452
+VP+ T + ++ C G A+ + ++ +K + S+ + LL RR+
Sbjct: 131 NLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEA 190
Query: 453 ---------SGF------------------GKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
+GF G LDL+ E G D ++
Sbjct: 191 RCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLN 250
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
GLC G++E A V++ + G P ++Y+ + N
Sbjct: 251 GLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVN 285
>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
Length = 826
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 191/436 (43%), Gaps = 40/436 (9%)
Query: 149 FFNWAIKHP--NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
F WA K N D S + ++K L R + F + N+L M + + P E LS V+
Sbjct: 83 LFEWASKRSDFNDLLDGFSCSSLLKLLARCRVFVEVENLLETMKCKDLAPTREALSFVVG 142
Query: 207 SFIRAGQVYKAIQMLGRLEDFG--------------------------------LK---- 230
+++ +G V +A+++ D +K
Sbjct: 143 AYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGC 202
Query: 231 FDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERV 289
+D S+ +++ LC+ V L N GK + N++ YN ++ G+ K G V +
Sbjct: 203 WDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGL 262
Query: 290 LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYIS 349
KE+ +GF P + T+ +I GL + + MKE+G + YN+++ I
Sbjct: 263 FKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIK 322
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
G E K + ++ CEP++ TY LISG + KV +A E+ E + RG+ P+ +
Sbjct: 323 HGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLS 382
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
T + C G A ++ + G L L AY L+ L G+ + L + +M
Sbjct: 383 YTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMV 442
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
E G D +Y ++ GLC G+L A L++ E L + V + L + + KL+
Sbjct: 443 ERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLD 502
Query: 530 SAYNLFRKIKIARQND 545
A LF ++ IA+ D
Sbjct: 503 EAKKLF-ELTIAKGMD 517
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 155/345 (44%), Gaps = 15/345 (4%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M ++G DL ++ + AG+V A+ + ++ + G+ DA NV++ LC++
Sbjct: 406 MTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGR 465
Query: 249 VGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ AA L M + L + ++ G+ + G++ E +++ + +A+G P + ++
Sbjct: 466 LSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNA 525
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
+I+G + G ++DA+ MK+ PD Y+ +I Y+ D +K + M
Sbjct: 526 MIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQK 585
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
C+PN+ TYT LI+G ++ + A + FEEM G+ P+ T T + C G A
Sbjct: 586 CKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKAC 645
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGF--------------GKCGMLLDLWHEMQESGY 473
++ C + + L+ L+ K +++D + M G+
Sbjct: 646 SFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGW 705
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
Y V+ LC+ + A+ + ++ KG P + ++ L
Sbjct: 706 EQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAAL 750
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 153/329 (46%), Gaps = 1/329 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +YN ++ R +L K G++P+ + + ++ + + G+ +A +
Sbjct: 344 DITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLF 403
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ + G D + ++ L V A ++ + M + VL + YN++++G K
Sbjct: 404 IGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKK 463
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ + +L E++ + S D+ + L++G R G++D+A ++F+ KG P Y
Sbjct: 464 GRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGY 523
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
NA+I Y G ++ + + M + P+ TY+ +I G +K + +AL++F +M+
Sbjct: 524 NAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVK 583
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+ P+ T TS + C G A +++ R G K ++ Y +L+ GK
Sbjct: 584 QKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISK 643
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ M + + + Y+I GL N
Sbjct: 644 ACSFFELMLLNRCIPNDVTFNYLINGLTN 672
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/414 (20%), Positives = 172/414 (41%), Gaps = 36/414 (8%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D S ++V+ L + + + +++D +G P++ + ++D + + G V +A +
Sbjct: 204 DNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLF 263
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--------------------- 260
L+ G E+ +++ LC++ + A L MK
Sbjct: 264 KELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKH 323
Query: 261 ------GKVLF---------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
GK L ++ TYN +ISG + G+V E E +L+ + G SP+ L++
Sbjct: 324 GCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSY 383
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LI + G+ A ++F M EKG D AY A++ ++ G+ D + M
Sbjct: 384 TPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVE 443
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
P+ + Y L++GL K +++ A + EML + + + ++ +G
Sbjct: 444 RGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDE 503
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A +++ G + Y +++ FG L M++ + D Y +I
Sbjct: 504 AKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIID 563
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G L NA+ + + +++ P+ + Y+ L N + A F +++
Sbjct: 564 GYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMR 617
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 172/409 (42%), Gaps = 10/409 (2%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K V +V+ YN IV A + + L + + G PD+ T + ++ R G+
Sbjct: 301 MKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGK 360
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYN 271
V++A ++L GL + S ++ C++ A LF M KG L +++ Y
Sbjct: 361 VHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPL-DLVAYG 419
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
++ G G+V V ++V G PD+ ++ L+ GL + GR+ A + M +
Sbjct: 420 ALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQ 479
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
D ++ +I G DE K ++ + +P + Y +I G K + DA
Sbjct: 480 NLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDA 539
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
L + M D P T ++ ++ H A+ ++ + K CK ++ Y L+
Sbjct: 540 LTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLING 599
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
G + EM+ SG + Y +I C G++ A E L P+
Sbjct: 600 FCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPN 659
Query: 512 RLVYSKLSNKLLASNKLESAY----NLFRKIKIARQNDYARRLWRSKGW 556
+ ++ L N L +N L +A N +IK + D+ R + S GW
Sbjct: 660 DVTFNYLINGL--TNNLATAVSNKANESLEIKASLMMDFFRTMI-SDGW 705
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 146/329 (44%), Gaps = 26/329 (7%)
Query: 109 KLKGKGVIEDA-LWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYN 167
K+ +GV+ DA ++NV ++ + +G LS ++L + H N++ D
Sbjct: 440 KMVERGVLPDANVYNV-------LMNGLCKKGRLSAAKLLLV---EMLHQNLSLDAFVSA 489
Query: 168 VIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDF 227
+V R D + +G++P + + ++ + + G + A+ + R++D
Sbjct: 490 TLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDG 549
Query: 228 GLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEM 286
D + + ++ ++ + A LF M K K NV+TY +I+G+ + G
Sbjct: 550 DHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRA 609
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI-- 344
E+ +E+ + G P+ +T++ LI + G+I A F+ M C P+ +N +I
Sbjct: 610 EKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLING 669
Query: 345 -SNYISVGDFDEC-----------MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
+N ++ ++ M +++ M S E + Y ++ L + V AL
Sbjct: 670 LTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAAL 729
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
++ ++M +GI P + + + LC G
Sbjct: 730 QLRDKMTGKGIFPDPVSFAALVYGLCLEG 758
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 172/359 (47%), Gaps = 9/359 (2%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D +Y +++ L R ++L DM + P + T ++++++ ++ +A+
Sbjct: 133 VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAM 192
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGW 277
++L + G + + NV++ +C+ V A + N + + ++Y V+ G
Sbjct: 193 KVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGL 252
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ ++E + E+V P+ +TF L+ R G ++ AIEV D M E GC +T
Sbjct: 253 CAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANT 312
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
N VI++ G D+ ++ M SY C P+ +YT ++ GL ++ + DA E+ E
Sbjct: 313 TLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNE 372
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ + P+ T +F+ LC G A+++ ++ + GC + + Y L+ G+
Sbjct: 373 MVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGR 432
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEY--VIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
L+L++ + P + Y ++ GLC+ +L+ A ++ E ++ CP +V
Sbjct: 433 VDSALELFNSL-----PCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQND-CPLNVV 485
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 174/375 (46%), Gaps = 4/375 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D SY ++K L K ++ + + +M + P+ T +++ F R G V +AI++L
Sbjct: 241 DTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVL 300
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKL 280
R+ + G + N+V+ +C++ V A N+M + ++Y V+ G +
Sbjct: 301 DRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRA 360
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ + + +L E+V + P+ +TF+ I L + G ID AI + + M E GC Y
Sbjct: 361 GRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTY 420
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
NA+++ + G D ++ + +S CEPN TYT L++GL + ++ A E+ EM+
Sbjct: 421 NALVNGFCVQGRVDSALELF---NSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQ 477
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+ T + C G A+ + ++ + GC +L + LL ++
Sbjct: 478 NDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEE 537
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L+L H + G D Y ++ L ++E AV + G P ++Y+K+ +
Sbjct: 538 ALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILS 597
Query: 521 KLLASNKLESAYNLF 535
L + + A + F
Sbjct: 598 ALCKRCETDRAIDFF 612
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 191/441 (43%), Gaps = 42/441 (9%)
Query: 135 VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
+ +RG + G+A+ L + + V +Y V+++A+ + F VL +M +G
Sbjct: 147 LCDRGRV-GDALSLLDDMLRRE--CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGC 203
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
P++ T +++++ R +V A Q+L RL +G + D S VL LC
Sbjct: 204 TPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEV 263
Query: 255 LF------NSMKGKVLF------------------------------NVMTYNIVISGWS 278
LF N + +V F N NIVI+
Sbjct: 264 LFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSIC 323
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G+V + L + + G SPD+++++ +++GL RAGR +DA E+ + M K C P+
Sbjct: 324 KQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEV 383
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
+N I G D+ + + M Y C + TY L++G +V ALE+F +
Sbjct: 384 TFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL 443
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
P+T T T+ L LC AA + + + C L++ + +L+ G
Sbjct: 444 ---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFV 500
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
++L +M E G + + ++ G+ E A+ ++ + KG + YS +
Sbjct: 501 EEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSI 560
Query: 519 SNKLLASNKLESAYNLFRKIK 539
+ L +++E A +F ++
Sbjct: 561 VDVLSREDRIEEAVQMFHAVQ 581
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 168/380 (44%), Gaps = 4/380 (1%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A DV +++ L RR VL G D+ + ++ + R G++ A +
Sbjct: 67 APDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARR 126
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWS 278
++ + + DA + ++ LC R VG A SL + M + + +V+TY +++
Sbjct: 127 LIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVC 183
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K + +VL E+ A+G +P+ +T++ +I G+ R R+DDA ++ + + G PDT
Sbjct: 184 KSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTV 243
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
+Y V+ + +++ + M NC PN T+ L+ + V A+EV + M
Sbjct: 244 SYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRM 303
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+ G +T + +C G A GC +Y +L+ L G+
Sbjct: 304 SEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRW 363
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+L +EM P + + I LC G ++ A+L++E+ G + Y+ L
Sbjct: 364 EDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNAL 423
Query: 519 SNKLLASNKLESAYNLFRKI 538
N +++SA LF +
Sbjct: 424 VNGFCVQGRVDSALELFNSL 443
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 158/352 (44%), Gaps = 4/352 (1%)
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
N+++ ++ ++ D L++M G +PD + + V+ RAG+ A ++L +
Sbjct: 316 NIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVR 375
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVE 285
+ + N + LCQ+ + A L M ++TYN +++G+ G+V
Sbjct: 376 KNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDS 435
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+ + E P+++T++ L+ GL A R+D A E+ M + C + +N ++S
Sbjct: 436 ALELFNSLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVS 492
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+ G +E ++ + M + C PN+ T+ L+ G+ + +ALE+ ++ +GI
Sbjct: 493 FFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISL 552
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
T T +S ++ L A+ M+ + +G + Y +L L + +D +
Sbjct: 553 DTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFF 612
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
M + + Y +I GL G L+ A V+ E +G L+ +
Sbjct: 613 AHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGVLSKSLIEDR 664
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 3/158 (1%)
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L+ +A+A + E RG P T + LC G A + + A G +
Sbjct: 45 LIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVD 104
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ AY L+ +G+ + G L + P D Y +I GLC+ G++ +A+ +++
Sbjct: 105 VFAYNTLV---AGYCRYGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLD 161
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ LR+ PS + Y+ L + S+ A + +++
Sbjct: 162 DMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMR 199
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 84/223 (37%), Gaps = 38/223 (17%)
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
I+ D E + + +S P++ T+LI L + + +DA V G
Sbjct: 46 IARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDV 105
Query: 408 GTITSFLEPLCSYG--------------PPHA------------------AMMMYKKARK 435
+ + C YG PP A A+ + +
Sbjct: 106 FAYNTLVAGYCRYGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLR 165
Query: 436 VGCKLSLTAYKLLLRRL---SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
C+ S+ Y +LL + SGFG+ +LD EM+ G + Y +I G+C +
Sbjct: 166 RECQPSVVTYTVLLEAVCKSSGFGQAMKVLD---EMRAKGCTPNIVTYNVIINGMCREDR 222
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+++A ++ GF P + Y+ + L A+ + E LF
Sbjct: 223 VDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLF 265
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 192/405 (47%), Gaps = 27/405 (6%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV +Y +++ R++ +LS M EG P + ++ ++ R+G
Sbjct: 332 PNVV----TYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSY 387
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLC--QRLHVGAASSLFNSMKGKVL-FNVMTYNIV 273
A ++L ++ D G + N+++ +C ++L L G++L +V+ +
Sbjct: 388 AYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVN 447
Query: 274 ISGWSKL----GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
+S ++ G+ + +++E++++GF PD+ T+S +I L A ++D+A +F+ MK
Sbjct: 448 VSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMK 507
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
PD Y +I ++ VG + K++ M C PN+ TYT LI LK+RK++
Sbjct: 508 SNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMS 567
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR--------KVGCKL- 440
A E+FE ML G +P+ T T+ ++ C G A +Y + R + K+
Sbjct: 568 SANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKID 627
Query: 441 -------SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
++ Y L+ L K DL M G + +Y+ +I G C +G+L
Sbjct: 628 DGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKL 687
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ A +V + +G+ P+ YS L ++L +L+ A + ++
Sbjct: 688 DEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRM 732
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 167/381 (43%), Gaps = 34/381 (8%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR-------RKFFDFMC 183
V+G + N + A +LF +K +V DV +Y +++ + + RK+FD
Sbjct: 486 VIGLLCNASKVD-NAFLLF--EEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFD--- 539
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
+M ++G P++ T + ++ ++++A ++ A ++ + G + + ++
Sbjct: 540 ----EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595
Query: 244 CQRLHVGAASSLFNSMKGKVLF-----------------NVMTYNIVISGWSKLGQVVEM 286
C+ + A ++ M+G N+ TY ++ G K +V E
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEA 655
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
+L + EG P+ + + LI+G + G++D+A VF M E+G GP+ Y+++I
Sbjct: 656 RDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDR 715
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
D +K M +C PN+ YT +I GL K K +A + M ++G P+
Sbjct: 716 LFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPN 775
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
T T+ ++ G + + ++ GC + Y++L+ G L
Sbjct: 776 VVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLD 835
Query: 467 EMQESGYPSDGEIYEYVIAGL 487
EM+++ +P Y VI G
Sbjct: 836 EMKQTYWPKHMAGYRKVIEGF 856
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 159/381 (41%), Gaps = 52/381 (13%)
Query: 211 AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMT 269
AG+ KA ++ + G D + + V+ LC V A LF MK V+ +V T
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
Y I+I + K+G + + + E+V +G +P+ +T++ LI +A ++ A E+F+ M
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYY---KG------------------------ 362
+GC P+ Y A+I + G ++ + Y +G
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIF 637
Query: 363 ------------------------MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
MS CEPN Y LI G K K+ +A VF +M
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+RG P+ T +S ++ L A+ + + + C ++ Y ++ L GK
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
L M+E G + Y +I G G+++ + +M + KG P+ + Y L
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817
Query: 519 SNKLLASNKLESAYNLFRKIK 539
N A+ L+ A+ L ++K
Sbjct: 818 INHCCAAGLLDDAHQLLDEMK 838
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 157/378 (41%), Gaps = 8/378 (2%)
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
K NV+++ R ++ L + G P T + ++ F+ A ++ A +
Sbjct: 198 KLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHRE 257
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQV 283
+ D G D +L + LC+ A +L + K+ + + Y +ISG +
Sbjct: 258 MSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKL--DTVIYTQMISGLCEASLF 315
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E L + + P+ +T+ L+ G R ++ + M +GC P +N++
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSL 375
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA--DALEVFE----E 397
I Y GD+ K K M C+P Y LI G+ + K+ D LE+ E E
Sbjct: 376 IHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGE 435
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
MLD +V + +++ LC G A + ++ G + Y ++ L K
Sbjct: 436 MLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASK 495
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L+ EM+ + D Y +I C +G L+ A +E +R G P+ + Y+
Sbjct: 496 VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTA 555
Query: 518 LSNKLLASNKLESAYNLF 535
L + L + K+ SA LF
Sbjct: 556 LIHAYLKARKMSSANELF 573
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 176/436 (40%), Gaps = 74/436 (16%)
Query: 123 VNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFM 182
+N L +DV+ V N E V FF WA + Y+ +++ LG
Sbjct: 127 LNETLVVDVLSLVKNP-----ELGVKFFIWAGRQIGYGHTGPVYHALLEVLG-------- 173
Query: 183 CN----VLSDMAKEGVNPDLETLSIVMDSFIRA----GQVYKAIQMLGRLEDFGLKFDAE 234
C V +E + D E L +++ IR G A++ LGRL+D G K
Sbjct: 174 CGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKP--- 230
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
+ +TYN ++ + + ++ V +E+
Sbjct: 231 -------------------------------SRLTYNALVRVFLEADRLDTAYLVHREMS 259
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
GF+ D T + L +AGR +A+ + + + K DT Y +IS F+
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFK---LDTVIYTQMISGLCEASLFE 316
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E M + M S +C PN+ TY L+ G L+ R++ + M+ G PS S +
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLI 376
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
C G A + KK GC+ Y +L+ + G K L L E+ E Y
Sbjct: 377 HAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVL--ELAEKAY- 433
Query: 475 SDGEIYEYVIA-----------GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
GE+ + + LC G+ E A ++ E + KGF P YSK+ L
Sbjct: 434 --GEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLC 491
Query: 524 ASNKLESAYNLFRKIK 539
++K+++A+ LF ++K
Sbjct: 492 NASKVDNAFLLFEEMK 507
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 156/382 (40%), Gaps = 10/382 (2%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN +V+ D V +M+ G N D TL + +AG+ +A+ ++ +
Sbjct: 234 TYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKE 293
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
E K D ++ LC+ A + M+ + NV+TY I++ G + Q+
Sbjct: 294 E---FKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQL 350
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+R+L ++ EG P F+ LI R+G A ++ M + GC P YN +
Sbjct: 351 GRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNIL 410
Query: 344 ISNYI------SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
I S+ + K Y M + N + L L + K A + E
Sbjct: 411 IGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIRE 470
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ +G +P T T + + LC+ A +++++ + + Y +L+ G
Sbjct: 471 MMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGL 530
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+ EM G + Y +I ++ +A + E L +G P+ + Y+
Sbjct: 531 LQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTA 590
Query: 518 LSNKLLASNKLESAYNLFRKIK 539
L + S ++E A ++ +++
Sbjct: 591 LIDGHCKSGQIEKACQIYARMR 612
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 127/281 (45%), Gaps = 46/281 (16%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y+ ++ + D V + M++ G P++ T S ++D + ++ A+++L R+
Sbjct: 674 YDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRML 733
Query: 226 DFGLKFDAESLNVVLWC-----LCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSK 279
+ ++ + NV+++ LC+ A L + M+ K NV+TY +I G+ K
Sbjct: 734 E-----NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGK 788
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK---------- 329
G+V + +++++ A+G +P+ +T+ LI AG +DDA ++ D MK
Sbjct: 789 AGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAG 848
Query: 330 -----------------------EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
E P AY +I ++ G + ++ +K MSS
Sbjct: 849 YRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSC 908
Query: 367 N--CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+ D Y+ LI L + KV A E++ +M+ RG +P
Sbjct: 909 TSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIP 949
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 106/238 (44%), Gaps = 38/238 (15%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ A +V Y ++ L + D ++S M ++G +P++ T + ++D F +AG+V K
Sbjct: 736 SCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKC 795
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-----------KVL-- 264
++++ ++ G + + V++ C + A L + MK KV+
Sbjct: 796 LELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEG 855
Query: 265 FN---------------------VMTYNIVISGWSKLGQV---VEMERVLKEIVAEGFSP 300
FN + Y I+I + K G++ +E+ + + + +
Sbjct: 856 FNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYS-AA 914
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
D +S LIE L A ++D A E++ M ++G P+ + + ++ I + ++E ++
Sbjct: 915 DKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQ 972
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 185/408 (45%), Gaps = 8/408 (1%)
Query: 140 NLSG--EAMVLFFNWAIKH----PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG 193
+LSG E +L F W H N+ D + ++V+ LGR + + E
Sbjct: 152 DLSGNWERALLLFEWGWLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEK 211
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHV-GAA 252
+ D+ + ++ ++ R+G+ +AI + ++E GL + NV+L + G
Sbjct: 212 YSLDVRAYTTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRI 271
Query: 253 SSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
L + M+ K L F+ T + VIS + G + E + L E+ G+ P ++ ++ +++
Sbjct: 272 LELLDEMRSKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQV 331
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
G+AG +A+ + M++ C PD+ YN + + Y+ G DE M M+S PN
Sbjct: 332 FGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPN 391
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
TYT +I K+ + DAL +F +M D G P+ T S L L + +
Sbjct: 392 AITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLC 451
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ + GC + + +L S GK + + EM+ G+ D + + +I+ G
Sbjct: 452 EMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCG 511
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ + E ++ GF P Y+ L N L ++A ++ + ++
Sbjct: 512 SEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQ 559
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 169/363 (46%), Gaps = 10/363 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY-KAIQM 220
DV++Y I+ A R + ++ M G++P L T ++++D + + G+ + + +++
Sbjct: 215 DVRAYTTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRILEL 274
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWS 278
L + GL+FD + + V+ + + A +K G VM YN ++ +
Sbjct: 275 LDEMRSKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVM-YNSMLQVFG 333
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G E +LKE+ PDS+T++ L RAG +D+ + V DTM KG P+
Sbjct: 334 KAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAI 393
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
Y VI Y G D+ ++ + M C PN+ TY +++ L K + D ++V EM
Sbjct: 394 TYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEM 453
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
G P+ T + L G + + ++ + G + + L +S + +C
Sbjct: 454 KLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTL---ISSYARC 510
Query: 459 GMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
G +D ++ EM +SG+ Y ++ L + G + A V+++ KGF P+ Y
Sbjct: 511 GSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSY 570
Query: 516 SKL 518
S L
Sbjct: 571 SLL 573
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 170/395 (43%), Gaps = 36/395 (9%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N D +YN + R F D V+ M +GV P+ T + V+D++ +AG+ A
Sbjct: 352 NCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDA 411
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISG 276
+++ +++D G + + N VL L ++ + MK N T+N +++
Sbjct: 412 LRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAV 471
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
S+ G+ + +VL+E+ GF PD TF+ LI R G D+ +++ M + G P
Sbjct: 472 CSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPC 531
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YNA+++ GD+ + M + +PN +Y+ L+ K+ V +V +
Sbjct: 532 VTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEK 591
Query: 397 EMLDRGIVPSTGTITSFL----------------EPLCSYG-PPHAAMM----------- 428
E+ D + PS + + + + L YG P ++
Sbjct: 592 EIYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNK 651
Query: 429 MYKKARKV-------GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
M+ KAR++ G + +L Y L+ +C ++ +Q S D Y
Sbjct: 652 MFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYN 711
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
VI G C G ++ A+ V+ E KG P+ + Y+
Sbjct: 712 TVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYN 746
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 146/357 (40%), Gaps = 56/357 (15%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A + ++N ++ +++ VL +M G PD +T + ++ S+ R G + +
Sbjct: 459 APNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAK 518
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWS 278
M G + G + N +L L R AA S+ M+ K N +Y++++ +S
Sbjct: 519 MYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYS 578
Query: 279 KLGQVVEMERVLKEIV-----------------------------------AEGFSPDSL 303
K G V +E+V KEI G+ PD +
Sbjct: 579 KAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLV 638
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK---YY 360
+ ++ R A E+ + E G P+ YN ++ Y+ DEC K
Sbjct: 639 VINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVRE---DECWKAEEVL 695
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
KG+ + EP++ +Y +I G + + +A+ V EM +GI P+ T +FL
Sbjct: 696 KGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLS----- 750
Query: 421 GPPHAAMMMYKKARKV-------GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+A M ++ +A +V C+ S YK+L+ GK +D +++E
Sbjct: 751 --GYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKHEEAMDFVTKIKE 805
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 119/283 (42%), Gaps = 17/283 (6%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +YN ++ AL R + +V+ DM +G P+ + S+++ + +AG V + I+ +
Sbjct: 532 VTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNV-RGIEKVE 590
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRL--------HVGAASSLFNSM-KGKVLFNVMTYNIV 273
+ G F + W L + L H+ F+ + K +++ N +
Sbjct: 591 KEIYDGQVFPS-------WILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSM 643
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
+S +S+ + +L I G P+ T++ L++ R A EV ++
Sbjct: 644 LSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVP 703
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
PD +YN VI + G E ++ M++ +P + TY +SG +A E
Sbjct: 704 EPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANE 763
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
V M++ PS T ++ C G AM K +++
Sbjct: 764 VIRFMIEHNCRPSELTYKILVDGYCKAGKHEEAMDFVTKIKEI 806
>gi|357131182|ref|XP_003567219.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Brachypodium distachyon]
Length = 518
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 163/358 (45%), Gaps = 5/358 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
P+ A + + ++ L + + FD +L +M ++ + L +++ + A V
Sbjct: 127 QPDYAPGRHACHSMLAILAKHRRFDDARALLDEMRRKSLASPRAVL-LLVRRYCAARDVT 185
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVIS 275
+AI L FG + + +L LC+ +V A L S + + F ++NIV++
Sbjct: 186 RAIAAFHALPSFGFEPGVAQFHGLLSALCRYKNVQDAEHLLLSSEKEFPFETKSFNIVLN 245
Query: 276 GWSKL-GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
GW + V E +R + G D ++ +I +AG +D +++F+ MKE G
Sbjct: 246 GWCNMVCSVREAKRFWTAMEVRGIERDVASYGSMISCFSKAGSLDSVLKLFNGMKEAGIV 305
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YNAV+ DE + M P+ TY LI L K+R+V +A ++
Sbjct: 306 PDRKVYNAVVYALAKGRCVDEAKALVRSMEERGTPPDTATYNSLIGPLCKARQVQEATQM 365
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F+EM+ RG++ S T + + S P + K + + C+ + Y +L+R+
Sbjct: 366 FDEMIGRGLLASVRTFHALFDVATS---PSEVFDVLDKMKTLHCEPEIDTYIMLIRKFCR 422
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
+ + + LW M +G D Y +I GL G+LE A EE KGF P +
Sbjct: 423 WRQHDSVEKLWSAMPTNGLNPDRSAYIVLIHGLFLNGKLEEAAKYYEEMKAKGFPPEQ 480
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 99/242 (40%), Gaps = 9/242 (3%)
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
++P ++ L + R DDA + D M+ K A ++ Y + D +
Sbjct: 130 YAPGRHACHSMLAILAKHRRFDDARALLDEMRRKSLA-SPRAVLLLVRRYCAARDVTRAI 188
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML---DRGIVPSTGTITSFL 414
+ + S+ EP + + L+S L + + V DA E +L ++ T + L
Sbjct: 189 AAFHALPSFGFEPGVAQFHGLLSALCRYKNVQDA----EHLLLSSEKEFPFETKSFNIVL 244
Query: 415 EPLCSYGPPHAAMMMYKKARKV-GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
C+ + A +V G + + +Y ++ S G +L L++ M+E+G
Sbjct: 245 NGWCNMVCSVREAKRFWTAMEVRGIERDVASYGSMISCFSKAGSLDSVLKLFNGMKEAGI 304
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
D ++Y V+ L ++ A ++ +G P Y+ L L + +++ A
Sbjct: 305 VPDRKVYNAVVYALAKGRCVDEAKALVRSMEERGTPPDTATYNSLIGPLCKARQVQEATQ 364
Query: 534 LF 535
+F
Sbjct: 365 MF 366
>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 185/379 (48%), Gaps = 3/379 (0%)
Query: 162 DVKSYNVIVKALGRR-KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
DV +YN+++ A R + FD + + M G P L T V+++F G + +A +
Sbjct: 183 DVYAYNILINAYCTRGQTFDAL-GWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNL 241
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSK 279
+++ G + N ++ + +G A+ L+ MK K V + T+NI+++G +
Sbjct: 242 FDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYR 301
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G+ + +R+L+++ G S ++ + GL AG +D+A++ + M EKG P A
Sbjct: 302 YGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVA 361
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
+N++I+ Y G ++ K Y+ M + P+ T + LI GL K ++ +A ++ EM+
Sbjct: 362 FNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMI 421
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
G+ + T L+ G A ++ + G A+ + LS G
Sbjct: 422 VEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVD 481
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
D++ +M + G+ + +Y +I G CN G+L+ A+++ E RKG P + +
Sbjct: 482 EAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIII 541
Query: 520 NKLLASNKLESAYNLFRKI 538
N L +++SA ++FR +
Sbjct: 542 NGLCKEGRMKSASDVFRNM 560
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 161/350 (46%), Gaps = 8/350 (2%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG---QVYKAIQMLG 222
YN+ V L + D L DM ++G+ P + + ++ ++ RAG + YKA +M+
Sbjct: 327 YNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMV 386
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLG 281
+ FGL + + + ++ L + + A L M + L N + +++ G+ ++G
Sbjct: 387 K---FGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMG 443
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
V + E+ G PD++ FS I GL G +D+A +VF M +KG P+ YN
Sbjct: 444 DVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYN 503
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++I + + G E + + M+ P++ T +I+GL K ++ A +VF M
Sbjct: 504 SLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHT 563
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G++P T + ++ C + + K G +T Y + L L K
Sbjct: 564 GLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRA 623
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
+ + E+ +G D Y V+ G+C LE A++V + L+ F P+
Sbjct: 624 VMMLEELISAGVVPDTVTYNTVMNGVCT-DVLERAMIVTAKLLKMAFVPN 672
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 180/440 (40%), Gaps = 46/440 (10%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
V+ N+GN+ EA LF +K +V YN ++ + + + +M
Sbjct: 225 VINAFCNQGNMM-EARNLFD--GMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMK 281
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+ V PD T +I++ R G+ ++L L G + N+ + LC +
Sbjct: 282 SKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLD 341
Query: 251 AASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A M K + V+ +N +I+ +S+ G + + + +V G P SLT S LI
Sbjct: 342 EAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLI 401
Query: 310 EGLG-----------------------------------RAGRIDDAIEVFDTMKEKGCG 334
GL R G + A +++ M+ +G
Sbjct: 402 MGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIH 461
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD A++A I+ VG DE + MS PN Y LI G S ++ +AL +
Sbjct: 462 PDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALML 521
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
EM +G++P T + LC G +A +++ G + Y L + G
Sbjct: 522 EREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTL---IDG 578
Query: 455 FGKCGMLL---DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
+ K + ++ ++M +G+ D Y + GLC ++ AV+++EE + G P
Sbjct: 579 YCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPD 638
Query: 512 RLVYSKLSNKLLASNKLESA 531
+ Y+ + N + ++ LE A
Sbjct: 639 TVTYNTVMNG-VCTDVLERA 657
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 126/302 (41%), Gaps = 35/302 (11%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
++L +M EG+ + ++++D + R G V A + +E G+ DA + + + L
Sbjct: 415 DLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGL 474
Query: 244 CQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
V A +F M K + N YN +I G+ G++ E + +E+ +G PD
Sbjct: 475 SIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDI 534
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
T + +I GL + GR+ A +VF M G PD YN +I Y D +
Sbjct: 535 FTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNK 594
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST--------GTITSFL 414
M + +P++ TY + GL RK++ A+ + EE++ G+VP T G T L
Sbjct: 595 MYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVCTDVL 654
Query: 415 E--------------------------PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
E C G P +M +K ++ + KL+
Sbjct: 655 ERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQGMPEKTIMWGQKLNEISFGFDEISIKLM 714
Query: 449 LR 450
R
Sbjct: 715 DR 716
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 160/387 (41%), Gaps = 13/387 (3%)
Query: 159 VAKDVKSYNVIVKALGR-RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+A+DV S+ + + R R+ +FM ++ D L +M F++ +A
Sbjct: 44 LAQDVVSWVIRRVGVDRSREVVEFMWKRHAEF-----ESDFSVLDTLMRGFLKVEMGCEA 98
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM----TYNIV 273
++++GR+ + GL+ + ++ ++ L L +G S++ ++G + +N V
Sbjct: 99 LEIVGRMREVGLRPSSSAITILFKLL---LRIGDHGSVWKLLRGMIHQGPRPCNRNFNAV 155
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
I G+ + G V E +L + PD ++ LI G+ DA+ M + GC
Sbjct: 156 ILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGC 215
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
P + VI+ + + G+ E + GM PN+ Y L++G +K+R + A
Sbjct: 216 TPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANM 275
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
++EEM + + P T + YG + + + G + Y + + L
Sbjct: 276 LYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLC 335
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
G + +M E G + +IA G E A ++ G PS L
Sbjct: 336 WAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSL 395
Query: 514 VYSKLSNKLLASNKLESAYNLFRKIKI 540
S L L +L+ A +L ++ +
Sbjct: 396 TCSSLIMGLSKLWRLQEARDLLYEMIV 422
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 183/381 (48%), Gaps = 3/381 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ LF ++ +V +Y V++ L + D +L++M ++GV P + +
Sbjct: 308 EALSLF--GEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNA 365
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
++ S+ + G + A+ +LG +E + + + N ++ C+ + A +L N M + K
Sbjct: 366 LIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESK 425
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ +V+TYN +I G ++G V R+ + ++ +GFSPD TF+ + L R GR+ +A
Sbjct: 426 LSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAH 485
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
++ +++KEK + +AY A+I Y G + +K M + C PN T+ +I GL
Sbjct: 486 QILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGL 545
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K KV DA+ + E+M + P+ T +E + A + + G + ++
Sbjct: 546 RKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNV 605
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y ++ G+ ++ +++ G D IY +I +G L++A V+
Sbjct: 606 VTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRR 665
Query: 503 SLRKGFCPSRLVYSKLSNKLL 523
G PS L YS L L+
Sbjct: 666 MFGTGCEPSYLTYSILMKHLV 686
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 182/418 (43%), Gaps = 33/418 (7%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
++G RG + VL ++ V +V++YN ++ R K D +L+ M
Sbjct: 366 LIGSYCKRGMMEDAVGVLGL---MESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMV 422
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+ ++PD+ T + ++ G V A ++ + G D + N + CLC+ VG
Sbjct: 423 ESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVG 482
Query: 251 AASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A + S+K K V N Y +I G+ K G++ + K ++AE P+S+TF+ +I
Sbjct: 483 EAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMI 542
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
+GL + G++ DA+ + + M + P + YN ++ + DFD + + S +
Sbjct: 543 DGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQ 602
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
PN+ TYT I ++ +A E+ ++ + G++ + + G +A +
Sbjct: 603 PNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGV 662
Query: 430 YKKARKVGCKLSLTAYKLLLRRL-------SGFGKCGMLL----------DLW------- 465
++ GC+ S Y +L++ L G G+ + D+W
Sbjct: 663 LRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGI 722
Query: 466 -----HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+M E G + Y +I GLC +G+L A + G PS ++++ L
Sbjct: 723 TTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSL 780
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 187/442 (42%), Gaps = 54/442 (12%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FF W +H N + +++ ++ L R + NV + M K +P T + +
Sbjct: 72 FFRWIRRHHNFPHSLATHHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDATFLL---NL 128
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM---KGKVLF 265
+R ++ A K S N +L CL + V SL+ M G +F
Sbjct: 129 LR--RMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVF 186
Query: 266 -NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD----------------------- 301
N++T N +++ + KLG + I+ PD
Sbjct: 187 PNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGV 246
Query: 302 --------SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+++++ LI GL AG++ +A+E + M+E GC P Y ++ G
Sbjct: 247 FCVMPRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRE 306
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
E + + M CEPN+ TYT LI L K ++ +AL++ EM+++G+ PS +
Sbjct: 307 LEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNAL 366
Query: 414 LEPLCSYGPPHAA--MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD----LWHE 467
+ C G A ++ +++KV C T +L + GF + G +D L ++
Sbjct: 367 IGSYCKRGMMEDAVGVLGLMESKKV-CPNVRTYNEL----ICGFCR-GKSMDRAMALLNK 420
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
M ES D Y +I GLC +G +++A + +R GF P + ++ L +
Sbjct: 421 MVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGR 480
Query: 528 LESAYNLFR--KIKIARQNDYA 547
+ A+ + K K + N++A
Sbjct: 481 VGEAHQILESLKEKHVKANEHA 502
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 127/540 (23%), Positives = 220/540 (40%), Gaps = 93/540 (17%)
Query: 56 LKELSDLFQISSHNSFPNVY----------KESRSNSVKRIDSS---RAVDEFLLPEERL 102
L+ LS ++ PNVY KE R + ++ + + V ++P L
Sbjct: 307 LEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNAL 366
Query: 103 RGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVN---------RGNLSGEAMVLFFNWA 153
G + ++ G++EDA+ + + S V V RG AM L N
Sbjct: 367 IGSYCKR----GMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALL-NKM 421
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ ++ DV +YN ++ L D + M ++G +PD T + M R G+
Sbjct: 422 VE-SKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGR 480
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
V +A Q+L L++ +K + + ++ C+ + A+SLF M + L N +T+N+
Sbjct: 481 VGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNV 540
Query: 273 VISGWSKLGQV-----------------------VEMERVLKE------------IVAEG 297
+I G K G+V + +E VLKE +++ G
Sbjct: 541 MIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSG 600
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
+ P+ +T++ I+ GR+++A E+ +K +G D+ YN +I+ Y +G D
Sbjct: 601 YQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAF 660
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA-----LEV------------------ 394
+ M CEP+ TY+ L+ L+ + + L+V
Sbjct: 661 GVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDF 720
Query: 395 ------FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
FE+M + G VP+ T + + LC G + A +Y R+ G S + L
Sbjct: 721 GITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSL 780
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L G G + L M E + + E Y+ +I GL E A V LR G+
Sbjct: 781 LSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGY 840
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 164/378 (43%), Gaps = 5/378 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y +V R + C V M + + + ++ AG++++A++
Sbjct: 223 DLFTYTSLVLGYCRNDDVERACGVFCVMPRRNA----VSYTNLIHGLCEAGKLHEALEFW 278
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
R+ + G + V++ LC+ A SLF M+ + NV TY ++I K
Sbjct: 279 ARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKE 338
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ E ++L E+V +G +P + F+ LI + G ++DA+ V M+ K P+ Y
Sbjct: 339 GRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTY 398
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I + D M M P++ TY LI GL + V A +F M+
Sbjct: 399 NELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIR 458
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G P T +F+ LC G A + + ++ K + AY L+ GK
Sbjct: 459 DGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEH 518
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L+ M + + +I GL G++++A+L++E+ + P+ Y+ L
Sbjct: 519 AASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVE 578
Query: 521 KLLASNKLESAYNLFRKI 538
++L + A + ++
Sbjct: 579 EVLKEYDFDRANEILNRL 596
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 178/406 (43%), Gaps = 39/406 (9%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN---PDLETLSIVMDSFIRAGQVYKA-- 217
+ SYN ++ L R D M ++ +M + N P+L TL+ +++S+ + G + A
Sbjct: 151 LTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARL 210
Query: 218 --IQMLGRLEDFGLKFDAESLNVVLWC-----------------------------LCQR 246
+++L R E F SL V+ +C LC+
Sbjct: 211 FFVRIL-RCEPGPDLFTYTSL-VLGYCRNDDVERACGVFCVMPRRNAVSYTNLIHGLCEA 268
Query: 247 LHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
+ A + M+ F V TY +++ + G+ +E + E+ G P+ T+
Sbjct: 269 GKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTY 328
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LI+ L + GR+D+A+++ + M EKG P +NA+I +Y G ++ + M S
Sbjct: 329 TVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMES 388
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
PN+ TY LI G + + + A+ + +M++ + P T + + LC G +
Sbjct: 389 KKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDS 448
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A +++ + G + + L G+ G + ++E ++ Y +I
Sbjct: 449 ASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALID 508
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G C G++E+A + + L + P+ + ++ + + L K++ A
Sbjct: 509 GYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDA 554
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 164/389 (42%), Gaps = 42/389 (10%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M ++G P + T ++++ + +G+ +A+ + G + + G + + + V++ LC+
Sbjct: 281 MREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGR 340
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ A + N M K V +V+ +N +I + K G + + VL + ++ P+ T++
Sbjct: 341 MDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNE 400
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI G R +D A+ + + M E PD YN +I VG D + ++ M
Sbjct: 401 LICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDG 460
Query: 368 CEP-----------------------------------NMDTYTRLISGLLKSRKVADAL 392
P N YT LI G K+ K+ A
Sbjct: 461 FSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAA 520
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+F+ ML +P++ T ++ L G AM++ + K K +L Y +L+ +
Sbjct: 521 SLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEV 580
Query: 453 ---SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
F + +L+ + SGY + Y I C+ G+LE A ++ + +G
Sbjct: 581 LKEYDFDRANEILN---RLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVL 637
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+Y+ L N L+SA+ + R++
Sbjct: 638 LDSFIYNLLINAYGCMGLLDSAFGVLRRM 666
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 165/397 (41%), Gaps = 64/397 (16%)
Query: 90 RAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLF 149
R + E LP V + L+ +G ++DA+ V E M F
Sbjct: 525 RMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLV--------------------EDMAKF 564
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
+V + +YN++V+ + + FD +L+ + G P++ T + + ++
Sbjct: 565 --------DVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYC 616
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL-CQRLHVGAASSLFNSMKGK------ 262
G++ +A +M+ ++++ G+ D+ N+++ C L + +A + M G
Sbjct: 617 SQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGL-LDSAFGVLRRMFGTGCEPSY 675
Query: 263 VLFNVMTYNIVISG-------------------------WSKLGQVVEMERVLKEIVAE- 296
+ ++++ ++VI WSK+ + VL E +AE
Sbjct: 676 LTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKID--FGITTVLFEKMAEC 733
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
G P+ T+S LI GL + GR++ A ++ M+E G P +N+++S+ +G F E
Sbjct: 734 GCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEA 793
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
+ M + ++++Y LI GL + A VF +L G ++
Sbjct: 794 VTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDG 853
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
L G + K GC+L Y +L++ L+
Sbjct: 854 LAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQELN 890
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 192/405 (47%), Gaps = 27/405 (6%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV +Y +++ R++ +LS M EG P + ++ ++ R+G
Sbjct: 332 PNVV----TYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSY 387
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLC--QRLHVGAASSLFNSMKGKVL-FNVMTYNIV 273
A ++L ++ D G + N+++ +C ++L L G++L +V+ +
Sbjct: 388 AYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVN 447
Query: 274 ISGWSKL----GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
+S ++ G+ + +++E++++GF PD+ T+S +I L A ++D+A +F+ MK
Sbjct: 448 VSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMK 507
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
PD Y +I ++ VG + K++ M C PN+ TYT LI LK+RK++
Sbjct: 508 SNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMS 567
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR--------KVGCKL- 440
A E+FE ML G +P+ T T+ ++ C G A +Y + R + K+
Sbjct: 568 SANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKID 627
Query: 441 -------SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
++ Y L+ L K DL M G + +Y+ +I G C +G+L
Sbjct: 628 DGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKL 687
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ A +V + +G+ P+ YS L ++L +L+ A + ++
Sbjct: 688 DEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRM 732
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 168/372 (45%), Gaps = 24/372 (6%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +Y+ ++ L D + +M V PD+ T +I++DSF + G + +A +
Sbjct: 479 DTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWF 538
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ G + + ++ + + +A+ LF M + + NV+TY +I G K
Sbjct: 539 DEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS 598
Query: 281 GQVVEMERVLKEIVAEGFSPDS----------------LTFSFLIEGLGRAGRIDDAIEV 324
GQ+ + ++ + PD T+ L++GL +A ++ +A ++
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
D M +GC P+ Y+A+I + VG DE + MS PN+ TY+ LI L K
Sbjct: 659 LDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFK 718
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+++ AL+V ML+ P+ T ++ LC G A + + GC ++
Sbjct: 719 DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778
Query: 445 YKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
Y + + GFGK G + L+L +M G + Y +I C G L++A +++
Sbjct: 779 YTAM---IDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLD 835
Query: 502 ESLRKGFCPSRL 513
E +++ + P +
Sbjct: 836 E-MKQTYWPKHM 846
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 167/381 (43%), Gaps = 34/381 (8%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR-------RKFFDFMC 183
V+G + N + A +LF +K +V DV +Y +++ + + RK+FD
Sbjct: 486 VIGLLCNASKVD-NAFLLF--EEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFD--- 539
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
+M ++G P++ T + ++ ++++A ++ A ++ + G + + ++
Sbjct: 540 ----EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595
Query: 244 CQRLHVGAASSLFNSMKGKVLF-----------------NVMTYNIVISGWSKLGQVVEM 286
C+ + A ++ M+G N+ TY ++ G K +V E
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEA 655
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
+L + EG P+ + + LI+G + G++D+A VF M E+G GP+ Y+++I
Sbjct: 656 RDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDR 715
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
D +K M +C PN+ YT +I GL K K +A + M ++G P+
Sbjct: 716 LFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPN 775
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
T T+ ++ G + + ++ GC + Y++L+ G L
Sbjct: 776 VVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLD 835
Query: 467 EMQESGYPSDGEIYEYVIAGL 487
EM+++ +P Y VI G
Sbjct: 836 EMKQTYWPKHMAGYRKVIEGF 856
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 159/381 (41%), Gaps = 52/381 (13%)
Query: 211 AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMT 269
AG+ KA ++ + G D + + V+ LC V A LF MK V+ +V T
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
Y I+I + K+G + + + E+V +G +P+ +T++ LI +A ++ A E+F+ M
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYY---KG------------------------ 362
+GC P+ Y A+I + G ++ + Y +G
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIF 637
Query: 363 ------------------------MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
MS CEPN Y LI G K K+ +A VF +M
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+RG P+ T +S ++ L A+ + + + C ++ Y ++ L GK
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
L M+E G + Y +I G G+++ + +M + KG P+ + Y L
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817
Query: 519 SNKLLASNKLESAYNLFRKIK 539
N A+ L+ A+ L ++K
Sbjct: 818 INHCCAAGLLDDAHQLLDEMK 838
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 157/378 (41%), Gaps = 8/378 (2%)
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
K NV+++ R ++ L + G P T + ++ F+ A ++ A +
Sbjct: 198 KLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHRE 257
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQV 283
+ D G D +L + LC+ A +L + K+ + + Y +ISG +
Sbjct: 258 MSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKL--DTVIYTQMISGLCEASLF 315
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E L + + P+ +T+ L+ G R ++ + M +GC P +N++
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSL 375
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA--DALEVFE----E 397
I Y GD+ K K M C+P Y LI G+ + K+ D LE+ E E
Sbjct: 376 IHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGE 435
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
MLD +V + +++ LC G A + ++ G + Y ++ L K
Sbjct: 436 MLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASK 495
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L+ EM+ + D Y +I C +G L+ A +E +R G P+ + Y+
Sbjct: 496 VDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTA 555
Query: 518 LSNKLLASNKLESAYNLF 535
L + L + K+ SA LF
Sbjct: 556 LIHAYLKARKMSSANELF 573
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 175/436 (40%), Gaps = 74/436 (16%)
Query: 123 VNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFM 182
+N L +DV+ V N E V FF WA + Y+ +++ LG
Sbjct: 127 LNETLVVDVLSLVKNP-----ELGVKFFIWAGRQIGYGHTGPVYHALLEVLG-------- 173
Query: 183 CN----VLSDMAKEGVNPDLETLSIVMDSFIRA----GQVYKAIQMLGRLEDFGLKFDAE 234
C V +E + D E L +++ IR G A++ LGRL+D G K
Sbjct: 174 CGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSR- 232
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
+TYN ++ + + ++ V +E+
Sbjct: 233 ---------------------------------LTYNALVRVFLEADRLDTAYLVHREMS 259
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
GF+ D T + L +AGR +A+ + + + K DT Y +IS F+
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFK---LDTVIYTQMISGLCEASLFE 316
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E M + M S +C PN+ TY L+ G L+ R++ + M+ G PS S +
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLI 376
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
C G A + KK GC+ Y +L+ + G K L L E+ E Y
Sbjct: 377 HAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVL--ELAEKAY- 433
Query: 475 SDGEIYEYVIA-----------GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
GE+ + + LC G+ E A ++ E + KGF P YSK+ L
Sbjct: 434 --GEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLC 491
Query: 524 ASNKLESAYNLFRKIK 539
++K+++A+ LF ++K
Sbjct: 492 NASKVDNAFLLFEEMK 507
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 127/281 (45%), Gaps = 46/281 (16%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y+ ++ + D V + M++ G P++ T S ++D + ++ A+++L R+
Sbjct: 674 YDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRML 733
Query: 226 DFGLKFDAESLNVVLWC-----LCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSK 279
+ ++ + NV+++ LC+ A L + M+ K NV+TY +I G+ K
Sbjct: 734 E-----NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGK 788
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK---------- 329
G+V + +++++ A+G +P+ +T+ LI AG +DDA ++ D MK
Sbjct: 789 AGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAG 848
Query: 330 -----------------------EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
E P AY +I ++ G + ++ +K MSS
Sbjct: 849 YRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSC 908
Query: 367 N--CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+ D Y+ LI L + KV A E++ +M+ RG +P
Sbjct: 909 TSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIP 949
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 101/230 (43%), Gaps = 38/230 (16%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ A +V Y ++ L + D ++S M ++G +P++ T + ++D F +AG+V K
Sbjct: 736 SCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKC 795
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-----------KVL-- 264
++++ ++ G + + V++ C + A L + MK KV+
Sbjct: 796 LELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEG 855
Query: 265 FN---------------------VMTYNIVISGWSKLGQV---VEMERVLKEIVAEGFSP 300
FN + Y I+I + K G++ +E+ + + + +
Sbjct: 856 FNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYS-AA 914
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
D +S LIE L A ++D A E++ M ++G P+ + + ++ I +
Sbjct: 915 DKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRI 964
>gi|414590862|tpg|DAA41433.1| TPA: hypothetical protein ZEAMMB73_769800 [Zea mays]
Length = 1295
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 200/435 (45%), Gaps = 13/435 (2%)
Query: 115 VIEDALW------NVNVDLSL-DVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYN 167
+ EDAL N+ VD L + + K + GN A LF + +K + +V SY+
Sbjct: 812 MFEDALLTYIQAKNIGVDRRLCNFLLKCLVEGNQIMYARSLFDD--MKSCGPSPNVCSYS 869
Query: 168 VIVK--ALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
+++ G R + +L +M GV P+ T + R+ QV A L L
Sbjct: 870 ILMSMYTHGERSCLEEAFELLCEMESNGVRPNATTYGTYLYGLCRSRQVTSAWDFLQTLS 929
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVV 284
G N V+ C V A +F+ MK + +V +Y+I++ G K G ++
Sbjct: 930 QSGGPCSNYCFNAVIHGFCCEGQVDKAIEVFHGMKKCGYVPDVHSYSILVDGLCKQGDLL 989
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ +L+E+ G P+ +++S L+ GL + G++ A+++F +++ G D Y+ ++
Sbjct: 990 KGYDMLEEMARNGICPNQVSYSSLLHGLCKTGQVALALKIFKNLQDHGFEHDQINYSIIL 1049
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
D + M +N P++ YT LI L + R + DAL VFE ML+ G+
Sbjct: 1050 HGCCQHLDLKAISDLWFDMIHHNIAPDVYNYTSLIYALCRHRNLQDALGVFELMLENGLS 1109
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARK-VGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T T ++ G A + + + +G +L Y++++ L K + +
Sbjct: 1110 PNIVTCTILVDSFSKQGLVGEAFLFLDRMHQSLGIVPNLCMYRVMINGLCKTNKYSGVWN 1169
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
++ +M + GY D +Y +I G +L+ A+ + + L +G P+ YS L N L
Sbjct: 1170 VFADMIKRGYVPDVVLYSIIIEGFVKALKLQEALRLYHKMLDEGVKPNIFTYSSLINGLC 1229
Query: 524 ASNKLESAYNLFRKI 538
++L A L R +
Sbjct: 1230 NDDRLPEAMGLIRDM 1244
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 150/356 (42%), Gaps = 38/356 (10%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+K DV SY+++V L ++ ++L +MA+ G+ P+ + S ++ + G
Sbjct: 962 GMKKCGYVPDVHSYSILVDGLCKQGDLLKGYDMLEEMARNGICPNQVSYSSLLHGLCKTG 1021
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNI 272
QV A+++ L+D G + D + +++L CQ L + A S L+ F+++ +NI
Sbjct: 1022 QVALALKIFKNLQDHGFEHDQINYSIILHGCCQHLDLKAISDLW--------FDMIHHNI 1073
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+PD ++ LI L R + DA+ VF+ M E G
Sbjct: 1074 --------------------------APDVYNYTSLIYALCRHRNLQDALGVFELMLENG 1107
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGM-SSYNCEPNMDTYTRLISGLLKSRKVADA 391
P+ ++ ++ G E + M S PN+ Y +I+GL K+ K +
Sbjct: 1108 LSPNIVTCTILVDSFSKQGLVGEAFLFLDRMHQSLGIVPNLCMYRVMINGLCKTNKYSGV 1167
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
VF +M+ RG VP + +E A+ +Y K G K ++ Y L+
Sbjct: 1168 WNVFADMIKRGYVPDVVLYSIIIEGFVKALKLQEALRLYHKMLDEGVKPNIFTYSSLING 1227
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L + + L +M D +Y +IA C ++ A ME + R G
Sbjct: 1228 LCNDDRLPEAMGLIRDMIGEDLLLDNVLYTSIIACYCRRLNMKAA---MEMAQRDG 1280
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 37/255 (14%)
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
+ +L I A+ D +FL++ L +I A +FD MK CGP
Sbjct: 815 DALLTYIQAKNIGVDRRLCNFLLKCLVEGNQIMYARSLFDDMK--SCGP----------- 861
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK--VADALEVFEEMLDRGIV 404
PN+ +Y+ L+S + + +A E+ EM G+
Sbjct: 862 ----------------------SPNVCSYSILMSMYTHGERSCLEEAFELLCEMESNGVR 899
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P+ T ++L LC +A + + G S + ++ G+ +++
Sbjct: 900 PNATTYGTYLYGLCRSRQVTSAWDFLQTLSQSGGPCSNYCFNAVIHGFCCEGQVDKAIEV 959
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+H M++ GY D Y ++ GLC G L ++EE R G CP+++ YS L + L
Sbjct: 960 FHGMKKCGYVPDVHSYSILVDGLCKQGDLLKGYDMLEEMARNGICPNQVSYSSLLHGLCK 1019
Query: 525 SNKLESAYNLFRKIK 539
+ ++ A +F+ ++
Sbjct: 1020 TGQVALALKIFKNLQ 1034
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 121/244 (49%), Gaps = 21/244 (8%)
Query: 52 EHHVLKELSDL-FQISSHNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKL 110
+H LK +SDL F + HN P+VY + ++ + + R + + L GVF
Sbjct: 1054 QHLDLKAISDLWFDMIHHNIAPDVY--NYTSLIYALCRHRNLQDAL-------GVF---- 1100
Query: 111 KGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIV 170
+ ++E+ L + N+ ++ ++ ++ L GEA LF + + + ++ Y V++
Sbjct: 1101 --ELMLENGL-SPNI-VTCTILVDSFSKQGLVGEAF-LFLDRMHQSLGIVPNLCMYRVMI 1155
Query: 171 KALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLK 230
L + + + NV +DM K G PD+ SI+++ F++A ++ +A+++ ++ D G+K
Sbjct: 1156 NGLCKTNKYSGVWNVFADMIKRGYVPDVVLYSIIIEGFVKALKLQEALRLYHKMLDEGVK 1215
Query: 231 FDAESLNVVLWCLCQRLHVGAASSLFNSMKGK--VLFNVMTYNIVISGWSKLGQVVEMER 288
+ + + ++ LC + A L M G+ +L NV+ +I+ +L ME
Sbjct: 1216 PNIFTYSSLINGLCNDDRLPEAMGLIRDMIGEDLLLDNVLYTSIIACYCRRLNMKAAMEM 1275
Query: 289 VLKE 292
++
Sbjct: 1276 AQRD 1279
>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Glycine max]
Length = 875
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 186/406 (45%), Gaps = 27/406 (6%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+ PNV ++N+++K + ++ M K G LE +I + +R G
Sbjct: 287 GLPRPNVV----TFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNG 342
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN-SMKGKVLFNVMTYN 271
++ +A +L + G++ +A + N+++ LC+ + A L + M+ V + + Y+
Sbjct: 343 ELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYS 402
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
++ G+ G+V E + VL E++ G P++ T + L+ L + GR +A E+ M EK
Sbjct: 403 TLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEK 462
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMK-----YYKGMSSY-----------------NCE 369
PDT N V++ G+ D+ + + G +S NC
Sbjct: 463 CYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCL 522
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P+ TYT LI+GL K ++ +A + F EML + + P + T +F+ C G +A +
Sbjct: 523 PDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRV 582
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
K + GC +L Y L+ L + + L EM+E G D Y +I LC
Sbjct: 583 LKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCE 642
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
G+ ++A+ ++ E L KG P+ + L S+ + A LF
Sbjct: 643 GGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELF 688
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 118/458 (25%), Positives = 201/458 (43%), Gaps = 50/458 (10%)
Query: 98 PEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHP 157
P E G+ ++ L G+++ AL VN + S + +VV
Sbjct: 183 PNEFTLGILVRGLCRAGLVKQALELVNNNNSCRIANRVV--------------------- 221
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
YN +V R + + ++ M + GV PD+ T + + + RAG+V +A
Sbjct: 222 --------YNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEA 273
Query: 218 IQMLGRLE---DFGL-KFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM-TYNI 272
++ ++ + GL + + + N++L C+ +G A L +MK F+ + YNI
Sbjct: 274 SRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNI 333
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+ G + G+++E VL E+VA+G P++ T++ +++GL R + DA + D M G
Sbjct: 334 WLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNG 393
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PDT AY+ ++ Y S G E M C+PN T L+ L K + +A
Sbjct: 394 VYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAE 453
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
E+ ++M ++ P T T + LC G KA ++ ++ T L +
Sbjct: 454 EMLQKMNEKCYQPDTVTCNIVVNGLCRNGE-------LDKASEIVSEM-WTNGPTSLDKG 505
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
+ F L++ H + S DG Y +I GLC +G+LE A E L K P
Sbjct: 506 NSFAS---LINSIHNV--SNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDS 560
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYARRL 550
+ Y K+ SA FR +K +N ++ L
Sbjct: 561 VTYDTFIWSFCKQGKISSA---FRVLKDMERNGCSKTL 595
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 176/404 (43%), Gaps = 28/404 (6%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
VA ++N+++ +L + FD + M ++G P+ TL I++ RAG V +A+
Sbjct: 146 VAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQAL 205
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGW 277
+++ + + N ++ C+ A L M VL +V+T+N IS
Sbjct: 206 ELVNNNNSCRIA-NRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISAL 264
Query: 278 SKLGQVVEMERVLKEIVAEG----FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
+ G+V+E R+ +++ + P+ +TF+ +++G + G + DA + +TMK+ G
Sbjct: 265 CRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGN 324
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
YN + + G+ E M + EPN TY ++ GL ++ ++DA
Sbjct: 325 FDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARG 384
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+ + M+ G+ P T ++ L CS G A + + + GC+ + LL L
Sbjct: 385 LMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLW 444
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE-------SLRK 506
G+ ++ +M E Y D V+ GLC G+L+ A ++ E SL K
Sbjct: 445 KEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDK 504
Query: 507 G---------------FCPSRLVYSKLSNKLLASNKLESAYNLF 535
G P + Y+ L N L +LE A F
Sbjct: 505 GNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKF 548
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 164/374 (43%), Gaps = 26/374 (6%)
Query: 159 VAKDVKSYNVIVKA-LGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
V D +Y+ ++ R K F+ +VL +M + G P+ T + ++ S + G+ +A
Sbjct: 394 VYPDTVAYSTLLHGYCSRGKVFEAK-SVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEA 452
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAAS---------------------SLF 256
+ML ++ + + D + N+V+ LC+ + AS SL
Sbjct: 453 EEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLI 512
Query: 257 NSMKG--KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
NS+ L + +TY +I+G K+G++ E ++ E++A+ PDS+T+ I +
Sbjct: 513 NSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCK 572
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G+I A V M+ GC YNA+I S E M P++ T
Sbjct: 573 QGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICT 632
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y +I+ L + K DA+ + EMLD+GI P+ + ++ A +++ A
Sbjct: 633 YNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVAL 692
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
+ C Y L+ L G+ +L+ + +Y+ +IA LC +L
Sbjct: 693 NI-CGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLA 751
Query: 495 NAVLVMEESLRKGF 508
+A ++ + + KG+
Sbjct: 752 DANSLLYKLIDKGY 765
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 149/309 (48%), Gaps = 1/309 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M K G P++ + ++D + G++ A+++L +E GL D + N +L LC
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 249 -VGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
AA L + MK + +V+T+ +I + K G + E + + KE++ P+++T++
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
+I GL GR+ DA + FD M KGC P+ YN +IS + DE MK ++ MS
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
++ TY LI G + K+ AL++F M+ R + P T L LC G +A+
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+ + R+ + + AY +++ L K +L+ + G D Y +I GL
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 488 CNIGQLENA 496
C G A
Sbjct: 467 CKNGPRREA 475
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 185/406 (45%), Gaps = 3/406 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A LFF P + + ++ A + ++ + M G++ DL + +I
Sbjct: 54 DAFALFFEMVHSQP--LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
++ F R ++ A+ +LG++ G + + +L C +G A SL M K
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
NV+ YN +I G K G++ +L E+ +G D +T++ L+ GL +GR DA
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+ M ++ PD + A+I ++ G+ DE + YK M + +PN TY +I+GL
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
++ DA + F+ M +G P+ T + + C + M ++++ G +
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L+ GK + LD++ M D + ++ GLC G++E+A++ ++
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYAR 548
+ Y+ + + L ++K+E A+ LF ++ + AR
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDAR 457
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 135/287 (47%), Gaps = 1/287 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV +YN ++ L + +L DM K +NPD+ T + ++D F++ G + +A
Sbjct: 207 LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQ 266
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
++ + + + + N ++ LC + A F+ M K F NV+TYN +ISG+
Sbjct: 267 ELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K V E ++ + + EGF+ D T++ LI G + G++ A+++F M + PD
Sbjct: 327 CKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDI 386
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+ ++ G+ + + + M + Y +I GL K+ KV A E+F
Sbjct: 387 ITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCR 446
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+ G+ P T T + LC GP A + ++ ++ G + A
Sbjct: 447 LPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNA 493
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 72/167 (43%)
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
D +L +G L S + DA +F EM+ +PS T L + + +K
Sbjct: 37 DYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQK 96
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
G L ++ +L+ + L + +M + GY + ++ G C + +
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ +A ++ ++ G+ P+ +VY+ L + L + +L A L +++
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEME 203
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 181/379 (47%), Gaps = 3/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN ++ L + + D +L M +GV PD T +I++ + GQ+ +A+++L
Sbjct: 234 DVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLL 293
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSK 279
++ GL+ D + ++++ C+ A S+F+SM KG+ N Y+I++ G++
Sbjct: 294 KKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKP-NSTIYHILLHGYAT 352
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G ++++ +L ++ +G + F+ LI + G +D A+ F M++ G PD +
Sbjct: 353 KGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVS 412
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y+ VI G ++ + ++ M S PN+ ++T LI GL + E+ EM+
Sbjct: 413 YSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMI 472
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
+RGI P + + ++ LC G A + +G K + +Y L+ GK
Sbjct: 473 NRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMD 532
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ M G D Y ++ G G++E+A+ + E RK + + +
Sbjct: 533 ESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIML 592
Query: 520 NKLLASNKLESAYNLFRKI 538
+ L + ++ +A L+ K+
Sbjct: 593 HGLFQAGRIVAARELYMKM 611
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 167/353 (47%), Gaps = 1/353 (0%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
++L M ++G+ + +I++ ++ + G V KA+ + GL+ D S + V+ L
Sbjct: 361 DLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHIL 420
Query: 244 CQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C+ V A FN M + L N++++ +I G +G+ ++E + E++ G PD+
Sbjct: 421 CKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDA 480
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+ + +++ L + GR+ +A + FD + G PD +YN +I Y VG DE +K
Sbjct: 481 IFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDR 540
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M S P+ TY L++G K+ +V DAL ++ EM + + T L L G
Sbjct: 541 MVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGR 600
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
AA +Y K G +L + Y +L L L ++ +++ + D +
Sbjct: 601 IVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSI 660
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
VI L +G+++ A + + +G P + YS + + LE + NLF
Sbjct: 661 VINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLF 713
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 146/304 (48%), Gaps = 4/304 (1%)
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN----VMTYNIVISGWS 278
R+ + G D S N ++ LC A L M +N V++YN VI G+
Sbjct: 152 RMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFF 211
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G+V + + E++ +G PD +T++ LI+GL +A +D A+ + M +KG PDT
Sbjct: 212 KEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTR 271
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
YN +I Y S+G +E ++ K MS +P++ TY+ LI K + A+A VF+ M
Sbjct: 272 TYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSM 331
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+ +G P++ L + G + + G A+ +L+ + G
Sbjct: 332 VRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAV 391
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+ + EM+++G D Y VI LC G++E+AV + + +G P+ + ++ L
Sbjct: 392 DKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSL 451
Query: 519 SNKL 522
+ L
Sbjct: 452 IHGL 455
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 176/422 (41%), Gaps = 22/422 (5%)
Query: 135 VVNR---GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR-------RKFFDFMCN 184
++NR G+L E + F+ + A V ++N ++ + R R +
Sbjct: 19 ILNRHRSGSLGREDALNLFDELLPQARPAS-VHAFNSVLTVVARADSSSSPRHSAALAVS 77
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ + M + GVN + I++ F G++ A G + +LN ++ LC
Sbjct: 78 LFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLC 137
Query: 245 QRLHVGAASSLFNSMKGKVLF--NVMTYNIVISGWSKLGQVVEMERVLKEIVAEG---FS 299
A + ++ + +V +YN +I G + E +L + A+G S
Sbjct: 138 DGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCS 197
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P+ ++++ +I+G + G +D A +F M +G PD YN++I D+ +
Sbjct: 198 PNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAI 257
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ M P+ TY +I G ++ +A+ + ++M G+ P T + ++ C
Sbjct: 258 LQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCK 317
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL---DLWHEMQESGYPSD 476
G A ++ + G K + T Y +LL G+ G L+ DL M G P +
Sbjct: 318 IGRCAEARSVFDSMVRKGQKPNSTIYHILLH---GYATKGALIDVRDLLDLMIRDGIPFE 374
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
+ +I G ++ A+ E + G P + YS + + L + ++E A F
Sbjct: 375 HRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFN 434
Query: 537 KI 538
++
Sbjct: 435 QM 436
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 6/284 (2%)
Query: 113 KGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVL----FFNWAIKHPNVAKDVKSYNV 168
K V E A +N + D + NL E V+ FF+ I H V DV SYN
Sbjct: 462 KKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVI-HIGVKPDVVSYNT 520
Query: 169 IVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
++ D L M G+ PD T + +++ + + G+V A+ + +
Sbjct: 521 LIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKD 580
Query: 229 LKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEME 287
+KF A + N++L L Q + AA L+ M + + TYN V+ G + V E
Sbjct: 581 VKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEAL 640
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
R+ +++ ++ F D TFS +I L + GRID+A +F M +G PD Y+ +I ++
Sbjct: 641 RMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSH 700
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
I G +E + M C + ++ LL+ V A
Sbjct: 701 IEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRA 744
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 126/269 (46%), Gaps = 7/269 (2%)
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
+M G++PD ++ +MD+ + G+V +A + G+K D S N ++ C
Sbjct: 470 EMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYC--- 526
Query: 248 HVGAASSLFNSMKGKVLFNVM----TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
VG + V + TYN +++G+ K G+V + + +E+ + ++
Sbjct: 527 FVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAI 586
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T + ++ GL +AGRI A E++ M ++G YN V+ DE ++ ++ +
Sbjct: 587 TSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDL 646
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
S E ++ T++ +I+ LLK ++ +A +F M+ RG VP T + ++ G
Sbjct: 647 RSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLL 706
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+ ++ K GC +++RRL
Sbjct: 707 EESDNLFLSMEKNGCAADSHMLNIIVRRL 735
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 117/247 (47%), Gaps = 8/247 (3%)
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ FFD + ++ GV PD+ + + ++D + G++ ++I+ L R+ GL+ D+ +
Sbjct: 500 QDFFDMVIHI-------GVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWT 552
Query: 236 LNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
N +L + V A +L+ M + V F +T NI++ G + G++V + ++V
Sbjct: 553 YNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMV 612
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
G T++ ++ GL +D+A+ +F+ ++ K D ++ VI+ + VG D
Sbjct: 613 DRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRID 672
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E + M P++ TY+ +I ++ + ++ +F M G + + +
Sbjct: 673 EAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIV 732
Query: 415 EPLCSYG 421
L G
Sbjct: 733 RRLLEKG 739
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 173/376 (46%), Gaps = 1/376 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y+ ++ L R + + M EGV P+L + V+++ + G V A ++ ++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ + D + ++ C++ + +A +FN M K N +TY+ +I+G G+V
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E +++E++ G P + T + I L G +DA +F MK KGC P+ Y A+
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS G + + MS PN TY LI+ L+++R++ A V M G
Sbjct: 362 ISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T ++ C G P AM++ + G +L Y +++ G L
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ M++ G D Y +I G C I ++E+A + E + G CP+ + Y+ L +
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541
Query: 524 ASNKLESAYNLFRKIK 539
KL++A +L +K
Sbjct: 542 KDEKLDTATSLLEHMK 557
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 177/417 (42%), Gaps = 36/417 (8%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D +Y ++ R+ D V + MAKEG P+ T S +++ +G+V +A
Sbjct: 246 MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAF 305
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ + G+ A + + LC A LF MK K NV TY +ISG
Sbjct: 306 DLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGL 365
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
G + + + +G P+++T++ LI L RI A V + M GC P+
Sbjct: 366 CVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNI 425
Query: 338 NAYNAVISNYISVGDFDECMKYYKGM---------SSYN--------------------- 367
YN +I Y +GD + M M +YN
Sbjct: 426 VTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDL 485
Query: 368 -----CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
C+P+ +YT LI G K K+ A +F EM+D G+ P+ T T+ ++ C
Sbjct: 486 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A + + ++ GC+ ++ Y +L+ L+ +L M E G + Y
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 605
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I GLC G A+ + + + +G P+ L YS L L K+E A NLF +++
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 662
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 170/384 (44%), Gaps = 8/384 (2%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K+ +V +Y ++ L + M+++GV P+ T + +++ + +
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYN 271
+ A +L + G + + N ++ C A + N+M +G N++TYN
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA-NLVTYN 464
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I G+ G R+L + G PD +++ LI G + +++ A +F+ M +
Sbjct: 465 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 524
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G P+ Y A+I Y D + M C PN+ TY LI GL K + A
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
E+ + M++ GI P+ T T+ ++ LC G A+ M+ K + GC +L Y L+R
Sbjct: 585 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 644
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L GK +L+ E++ G D Y +I G++E+A + ++ G P+
Sbjct: 645 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPT 704
Query: 512 RLVYSKL-----SNKLLASNKLES 530
Y L + LLA +L +
Sbjct: 705 LWTYGVLIKGLKNEYLLADQRLAA 728
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 121/254 (47%)
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+ Y+ ++ S+LG + +++EG P+ L ++ +I L + G + DA +
Sbjct: 178 MGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETI 237
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
+ E PDT Y ++I + D D ++ + M+ CEPN TY+ LI+GL
Sbjct: 238 MKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCD 297
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
S +V +A ++ EM+ GI+P+ T T + LC G A ++ + GC+ ++
Sbjct: 298 SGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYT 357
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y L+ L G + + L+H M G + Y +I L +++ A +V+
Sbjct: 358 YTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMG 417
Query: 505 RKGFCPSRLVYSKL 518
R G P+ + Y+++
Sbjct: 418 RNGCSPNIVTYNEM 431
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 136/310 (43%), Gaps = 45/310 (14%)
Query: 104 GVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDV 163
G+F + +I+ N + L+L++ K++ +G L PN+
Sbjct: 595 GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL---------------PNLL--- 636
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+Y+ +++ALG+ + N+ +++ + G+ PD T +++++I +G+V A LGR
Sbjct: 637 -TYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF---NVMTYNIVISGWSKL 280
+ G + LW L +K + L + V+ S
Sbjct: 696 MIKAGCQ-------PTLW---------TYGVLIKGLKNEYLLADQRLAALPDVVPNCSFG 739
Query: 281 GQVVEME--RVLKEIVAE---GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
Q + + V+ +AE G S + L+ L AGR +A E+ +M +G P
Sbjct: 740 YQTTDQDAVSVMSAKLAELDPGLSVQ--VQNALVSNLSTAGRWFEANELLGSMISQGLCP 797
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D AYN+++ + + V + D M +K MS+ CE +++ Y LI L + + +A F
Sbjct: 798 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857
Query: 396 EEMLDRGIVP 405
E ML R P
Sbjct: 858 ENMLMRTWNP 867
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%)
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
D + + G AY+A++ + +G M Y M S +PN+ Y +I+ L K
Sbjct: 168 LDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCK 227
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
VADA + +++ + + P T T TS + C +A+ ++ + K GC+ +
Sbjct: 228 DGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVT 287
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y L+ L G+ DL EM G I LC++G E+A + +
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 347
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
KG P+ Y+ L + L S L+ A LF ++
Sbjct: 348 NKGCEPNVYTYTALISGLCVSGILKVAIGLFHRM 381
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 127/310 (40%), Gaps = 25/310 (8%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y ++ + + D ++L M + G P+++T ++++ + A ++ +
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ G+ + + ++ LC+ A +FN M + L N++TY+ +I + G+V
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E E + E+ G PD +T+ +IE +G+++ A M + GC P Y +
Sbjct: 652 EEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVL 711
Query: 344 I----SNYI--------------------SVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
I + Y+ D D ++ + ++ L+
Sbjct: 712 IKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALV 771
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
S L + + +A E+ M+ +G+ P S L L AM ++K GC+
Sbjct: 772 SNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCE 831
Query: 440 LSLTAYKLLL 449
+ L YK L+
Sbjct: 832 VHLNGYKELI 841
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 165/347 (47%), Gaps = 6/347 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H + V +Y++++ A + + +L +M +G PD+ T ++++++ G V
Sbjct: 188 HRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVG 247
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVI 274
+A+++L L +G K DA + VL LC A L M + +T+N VI
Sbjct: 248 EALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVI 307
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI----EVFDTMKE 330
+ + G V +VL ++ G +PD +T+S +++GL + R+D+AI E+ M
Sbjct: 308 TSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVS 367
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL-KSRKVA 389
K C PD +N +I++ G FD +K MS + C P++ TY ++ G L KS K
Sbjct: 368 KNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTE 427
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
+AL++ M+ G+ P T T S L A+ M+++ + +G Y +L
Sbjct: 428 EALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAIL 487
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
L + + +D + M +G D Y ++ G+ G LE A
Sbjct: 488 LGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEA 534
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 161/385 (41%), Gaps = 74/385 (19%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A D +YN +++AL R V DM G +P + T SI++D+ + +A+
Sbjct: 157 APDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVV 216
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSK 279
+L + G + D ++TYN++I+
Sbjct: 217 LLDEMRSKGCEPD----------------------------------IVTYNVLINAMCS 242
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G V E +VL + + G PD++T++ +++ L + R ++A ++ M C PD
Sbjct: 243 QGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVT 302
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL----EVF 395
+NAVI++ G K MS + C P++ TY+ ++ GL K R+V +A+ E+
Sbjct: 303 FNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELL 362
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
EM+ + +P T + + LC G ++ +A KV
Sbjct: 363 AEMVSKNCIPDQVTFNTIITSLCQKG-------LFDRAIKV------------------- 396
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAG-LCNIGQLENAVLVMEESLRKGFCPSRLV 514
EM E G D Y ++ G LC + E A+ ++ + G CP
Sbjct: 397 ---------VDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTT 447
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
Y L+ L +++E A +FR+++
Sbjct: 448 YKSLAFGLSREDEMERAIGMFRRVQ 472
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 168/392 (42%), Gaps = 15/392 (3%)
Query: 152 WAIKHPNV-AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR 210
W P A+ N ++ L +R D ++ ++ G +P + +I++
Sbjct: 49 WTRTPPKPPARSGGGANRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCA 108
Query: 211 AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTY 270
G+V A +++ E G + N ++ C+ ++ AA + +S+ + TY
Sbjct: 109 DGRVADAERVV---EALGPSATIITYNTMVNGYCRAGNIDAARRMIDSVP--FAPDTFTY 163
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
N +I G V++ V +++ G SP +T+S L++ + A+ + D M+
Sbjct: 164 NPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRS 223
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
KGC PD YN +I+ S GD E +K + SY C+P+ TYT ++ L S + +
Sbjct: 224 KGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEE 283
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL- 449
A ++ +M P T + + LC G A + + + GC + Y ++
Sbjct: 284 ADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMD 343
Query: 450 -----RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
RR+ K +L +L EM D + +I LC G + A+ V++E
Sbjct: 344 GLCKERRVDEAIK--LLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMS 401
Query: 505 RKGFCPSRLVYSKLSNKLLA-SNKLESAYNLF 535
G P Y+ + + L S K E A +L
Sbjct: 402 EHGCIPDITTYNCIVDGFLCKSCKTEEALDLL 433
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 107/267 (40%), Gaps = 45/267 (16%)
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
+ G + G++ R++ I G P + + LI+ L GR+ DA V + +
Sbjct: 68 LRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL----- 122
Query: 334 GPDTN--AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
GP YN +++ Y G+ D + + S P+ TY LI L V DA
Sbjct: 123 GPSATIITYNTMVNGYCRAGNIDAARRM---IDSVPFAPDTFTYNPLIRALCVRGCVLDA 179
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
L VF++ML RG PS T + L+ C +
Sbjct: 180 LAVFDDMLHRGCSPSVVTYSILLDATC--------------------------------K 207
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
SG+ + +LLD EM+ G D Y +I +C+ G + A+ V+ G P
Sbjct: 208 ESGYKQAVVLLD---EMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPD 264
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y+ + L +S + E A L K+
Sbjct: 265 AVTYTPVLKSLCSSERWEEADKLLTKM 291
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 143/308 (46%), Gaps = 1/308 (0%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
PD T +++ + ++ A+ + + G+K DA N VL LCQ V A L
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 256 FNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
F M K ++ NV+TYN +I+G K ++ + KE+ +G+ P ++++ LI+G +
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
+ A +VFD M C P+ Y +I G + GM PN+ T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y+ LI G K R+V +A ++ E+M+ +GI P+ T L LC A +++
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
+ C ++ Y LLR L + L+ EM G P D Y+ + GL G++
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVH 306
Query: 495 NAVLVMEE 502
A +ME+
Sbjct: 307 EAQELMEK 314
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 148/318 (46%), Gaps = 1/318 (0%)
Query: 232 DAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVL 290
DA + ++ LC+ + A + M + + + YN V+SG + +V E +
Sbjct: 8 DALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLF 67
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
+++V + +P+ +T++ LI GL +A RI+ A E+F M KG P +YN +I +
Sbjct: 68 EKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKK 127
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
D + M NC PN+ TYT LI GL KS KV A EV + M+ +G+ P+ T
Sbjct: 128 KDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATY 187
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+ ++ C A + ++ G ++ Y +LL L K L+ M +
Sbjct: 188 SCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQ 247
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
Y ++ LC+ QL+ A + E + KG P + Y L+ L + K+
Sbjct: 248 RRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHE 307
Query: 531 AYNLFRKIKIARQNDYAR 548
A L K+K+ ++N + R
Sbjct: 308 AQELMEKMKLTKRNPFGR 325
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 121/237 (51%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
PD+LT+ ++E L + RIDDA+ + M +G PD YN V+S +E
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
++ M PN+ TY LI+GL K+ ++ A E+F+EM +G VP+ + + ++ C
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
AA ++ K + C ++ Y L+ LS GK ++ M + G +
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
Y +I G C + +++ A ++E+ + +G P+ + Y+ L N L ++KLE A+ LFR
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFR 243
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 135/277 (48%), Gaps = 1/277 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D YN ++ L + + + + M K+ +NP++ T + +++ +A ++ A
Sbjct: 40 IKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAY 99
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ + G S N ++ C++ + AA +F+ M + + NV+TY +I G
Sbjct: 100 ELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGL 159
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
SK G+V VL +V +G +P+ T+S LI+G + R+D+A ++ + M +G P
Sbjct: 160 SKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTV 219
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN ++++ ++ K ++GM+ C P + TY L+ L +++ A ++ E
Sbjct: 220 VTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAE 279
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
M+ +G P T + L G H A + +K +
Sbjct: 280 MIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 316
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 1/173 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N +V +Y ++ L + VL M K+GV P++ T S ++D F + +V +A
Sbjct: 144 NCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEA 203
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISG 276
++L ++ G+ + N++L LC+ + A LF M + V+TYN ++
Sbjct: 204 HKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRA 263
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
Q+ R+ E++A+G PD++T+ L GL RAG++ +A E+ + MK
Sbjct: 264 LCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 316
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 174/377 (46%), Gaps = 2/377 (0%)
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
K YN +++L R ++M V S + ++G+ PD T + ++ S+ + G + A +
Sbjct: 34 KCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRL 93
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQ 282
L + GL+ + + N ++ C+ + A LF M N +Y I+I G
Sbjct: 94 LLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKC 153
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V + + + +G SP+ F+FLI GL ++GR+ DA +FD M + G P YNA
Sbjct: 154 VRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNA 213
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I Y +G ++ +K + M C P+ TY LI GL +K +A E+ + G
Sbjct: 214 MIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEG 272
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P+ T T+ + C A+ M K CKL L + L+ L +
Sbjct: 273 FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAK 332
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+L +E+ +G + Y +I G C G+++ A+ V++ R G P+ Y+ L L
Sbjct: 333 ELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGL 392
Query: 523 LASNKLESAYNLFRKIK 539
+ KL A L K++
Sbjct: 393 VKDKKLHKAMALLTKMQ 409
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 170/350 (48%), Gaps = 2/350 (0%)
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-K 260
+I++ A V KA+ + ++ G + + ++ LC+ VG A LF++M +
Sbjct: 142 TILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQ 201
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
V+ +VMTYN +I G+SKLG++ + ++ + + G PD T++ LI GL + ++
Sbjct: 202 NGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEE 260
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A E+ + ++G P + +I+ Y FD+ ++ M S C+ ++ + +LI+
Sbjct: 261 AEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLIN 320
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
L+K ++ +A E+ E+ G+VP+ T TS ++ C G A+ + K + GC+
Sbjct: 321 SLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQP 380
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+ Y L+ L K + L +MQ+ G + Y ++ G C+ +NA +
Sbjct: 381 NAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF 440
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYARRL 550
E + G P Y+ L++ L + + E AY+ + +A Y L
Sbjct: 441 EMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTL 490
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 194/454 (42%), Gaps = 38/454 (8%)
Query: 81 NSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGN 140
NS+ + D + E LL E G+ + +I+ + VD++L+V+ K++ R
Sbjct: 320 NSLIKKDRLKEAKE-LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL-KMMERDG 377
Query: 141 LSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
A W +YN ++ L + K +L+ M K+G+ P++ T
Sbjct: 378 CQPNA------W------------TYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVIT 419
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
+ ++ A ++ +E GLK D + V+ LC+ A S F K
Sbjct: 420 YTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYS-FIVRK 478
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
G L V Y +I G+SK G +++ ++ EG +PDS T+S L+ L + R+++
Sbjct: 479 GVALTKVY-YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNE 537
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A+ + D M +G AY +I + G D + Y M+S +P+ TYT I+
Sbjct: 538 ALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFIN 597
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
K ++ DA ++ +M G+ P T ++ G A K+ C+
Sbjct: 598 SYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEP 657
Query: 441 SLTAYKLLLRRL--------SGFGKCGM--LLDL---WH---EMQESGYPSDGEIYEYVI 484
+ Y LLL+ L GM L++L W M + G Y +I
Sbjct: 658 NYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLI 717
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
AG C G+LE A L+++ KG P+ +Y+ L
Sbjct: 718 AGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLL 751
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 178/416 (42%), Gaps = 38/416 (9%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HP D +YN ++ L +K + +L++ KEG P + T + +++ + A +
Sbjct: 240 HP----DDWTYNTLIYGLCDQKTEEAE-ELLNNAVKEGFTPTVVTFTNLINGYCMAEKFD 294
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVI 274
A++M ++ K D + ++ L ++ + A L N + L NV+TY +I
Sbjct: 295 DALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSII 354
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ K G+V VLK + +G P++ T++ L+ GL + ++ A+ + M++ G
Sbjct: 355 DGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGII 414
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY------------------- 375
P+ Y ++ DFD + ++ M +P+ Y
Sbjct: 415 PNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 474
Query: 376 -------------TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
T LI G K+ A + E M+D G P + T + L LC
Sbjct: 475 IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 534
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
+ A+ + + G K ++ AY +L+ + GK +++EM SG+ Y
Sbjct: 535 LNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTV 594
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
I C G+LE+A ++ + R+G P + Y+ L + ++ A++ +++
Sbjct: 595 FINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRM 650
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 179/404 (44%), Gaps = 19/404 (4%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKAL---GR----RKFFDFMCNVLSDMAKEGVNP 196
+A+VLF +K + +V+++ ++ L GR R FD M + GV P
Sbjct: 156 KALVLFL--MMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFD-------AMPQNGVVP 206
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
+ T + ++ + + G++ A+++ +E G D + N +++ LC + A L
Sbjct: 207 SVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLN 266
Query: 257 NSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
N++K V+T+ +I+G+ + + R+ ++++ D F LI L +
Sbjct: 267 NAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKD 326
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
R+ +A E+ + + G P+ Y ++I Y G D ++ K M C+PN TY
Sbjct: 327 RLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYN 386
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
L+ GL+K +K+ A+ + +M GI+P+ T T+ L+ C A +++ +
Sbjct: 387 SLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQN 446
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G K AY +L L K G + + + G Y +I G G + A
Sbjct: 447 GLKPDEHAYAVLTDALC---KAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFA 503
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
++E + +G P YS L + L +L A + ++ +
Sbjct: 504 ATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL 547
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 179/400 (44%), Gaps = 11/400 (2%)
Query: 135 VVNRGNL-SGEAMVLFFNWAIKHPN------VAKDVKSYNVIVKALGRRKFFDFMCNVLS 187
VV NL +G M F+ A++ N D++ + ++ +L ++ +L+
Sbjct: 277 VVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLN 336
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
+++ G+ P++ T + ++D + ++G+V A+++L +E G + +A + N +++ L +
Sbjct: 337 EISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDK 396
Query: 248 HVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
+ A +L M K ++ NV+TY ++ G R+ + + G PD ++
Sbjct: 397 KLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYA 456
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
L + L +AGR A E + + KG Y +I + G+ D + M
Sbjct: 457 VLTDALCKAGR---AEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDE 513
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
C P+ TY+ L+ L K +++ +AL + ++M RGI + T ++ + G A
Sbjct: 514 GCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHA 573
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
MY + G K S T Y + + G+ DL +M+ G D Y +I G
Sbjct: 574 KRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDG 633
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
++G ++ A ++ + P+ Y L LL N
Sbjct: 634 CGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN 673
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 133/293 (45%), Gaps = 1/293 (0%)
Query: 246 RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
R+ A ++ + ++ + YN + ++ M RV ++V +G PD++T+
Sbjct: 12 RVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTY 71
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ +I+ + G + A F + E G P+T NA++ Y G+ + + M
Sbjct: 72 NTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPL 131
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
C+ N +YT LI GL ++ V AL +F M G P+ T + LC G
Sbjct: 132 MGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGD 191
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A +++ + G S+ Y ++ S G+ L + M+++G D Y +I
Sbjct: 192 ARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIY 251
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GLC+ + E A ++ ++++GF P+ + ++ L N + K + A + K+
Sbjct: 252 GLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKM 303
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 166/374 (44%), Gaps = 17/374 (4%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y ++ + DF ++ M EG PD T S+++ + + ++ +A+ +L ++
Sbjct: 487 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 546
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
G+K + +++ + + A ++N M + TY + I+ + K G++
Sbjct: 547 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 606
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ E ++ ++ EG +PD +T++ LI+G G G ID A M C P+ Y ++
Sbjct: 607 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 666
Query: 345 SNYI----------------SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ + ++ + D + + M + P + TY+ LI+G K+ ++
Sbjct: 667 KHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRL 726
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A + + M +G+ P+ T ++ C A+ + G + L +Y+LL
Sbjct: 727 EEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLL 786
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L G + L+ ++ E GY D ++ + GL G ++ ++ ++
Sbjct: 787 VVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYC 846
Query: 509 CPSRLVYSKLSNKL 522
C S Y+ ++NK+
Sbjct: 847 CISSQTYALVTNKM 860
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 142/352 (40%), Gaps = 71/352 (20%)
Query: 103 RGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKD 162
+GV L K+ +I+ N D + ++ ++++ G D
Sbjct: 478 KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG-------------------CTPD 518
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+Y+V++ AL ++K + +L M+ G+ + +I++D +R G+ A +M
Sbjct: 519 SYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYN 578
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+ G K A + V + C+ + A L M+ + V +V+TYNI+I G +G
Sbjct: 579 EMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMG 638
Query: 282 QV------------------------------------------------VEME---RVL 290
+ +E++ ++L
Sbjct: 639 YIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLL 698
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
+ +V G +P T+S LI G +AGR+++A + D M KG P+ + Y +I
Sbjct: 699 ERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDT 758
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
F++ + + MS +P +++Y L+ GL +F ++L+ G
Sbjct: 759 KFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELG 810
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 173/379 (45%), Gaps = 11/379 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN+++ L +R+ N+ M + GV P + T ++ + G + +A+++
Sbjct: 385 DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLY 444
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAAS-----SLFNSMKGK-VLFNVMTYNIVIS 275
+ G + NVV + + H+ A+ +L MK V N TYN +I+
Sbjct: 445 TEMPGKGF-----TPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLIN 499
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G +G+V E+ +LK EGF P ++T++ +I G +AG + A V+ M KG P
Sbjct: 500 GLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPP 559
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+ Y + I Y D +K + P++ Y LI G + ++ AL+V
Sbjct: 560 NIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVL 619
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
ML G++P+ SF+ + A+ +Y+K K G L Y L+ S
Sbjct: 620 VLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKD 679
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
G L L+ EM G D + + GLC G +++A +++E R P+ L+Y
Sbjct: 680 GNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMY 739
Query: 516 SKLSNKLLASNKLESAYNL 534
+ L N L + KL+ A+ L
Sbjct: 740 NMLINGYLRNGKLQEAFRL 758
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 159/336 (47%), Gaps = 6/336 (1%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV +Y ++K + FD +L++M + GV+ + T + +++ G+V +
Sbjct: 454 PNVV----TYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCE 509
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVIS 275
+ML R E G A + N ++ + +G+A +++ M K + N++TY I
Sbjct: 510 VGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFID 569
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G+ K ++L ++ +G PD ++ LI G + G + A++V M + G P
Sbjct: 570 GYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLP 629
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+ + YN+ I+ Y ++ +E ++ Y+ M + + TYT LI G K V AL+++
Sbjct: 630 NISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLY 689
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
EM+ +G +P T T+ LC G A + + ++ + ++ Y +L+
Sbjct: 690 SEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRN 749
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
GK L EM E D Y+ ++ G+ ++G
Sbjct: 750 GKLQEAFRLHDEMLERKIMPDDTTYD-ILVGMKSLG 784
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 175/397 (44%), Gaps = 4/397 (1%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F ++ V DV +Y V+++ + + M G+ P ++V+
Sbjct: 304 IFEETLRDGLVPTDV-TYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGL 362
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNV 267
+ A+ + + D G+ DA + N+++ LCQR + A +L+ M + V +
Sbjct: 363 LNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYI 421
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TY+ ++ + G + E ++ E+ +GF+P+ +T++ L++G D A +
Sbjct: 422 VTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAE 481
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
MK+ G + YN +I+ VG E + K + P TY +I+G +K+
Sbjct: 482 MKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGM 541
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ A V+++M +GI P+ T TSF++ C A+ M R G + + AY
Sbjct: 542 MGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNS 601
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L+ G L + M + G + +Y I G N+ +E A+ + E+ +++G
Sbjct: 602 LIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEG 661
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
Y+ L + + A L+ ++ +A+ N
Sbjct: 662 IDLDTATYTTLIDGFSKDGNVTFALKLYSEM-VAKGN 697
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 169/391 (43%), Gaps = 45/391 (11%)
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
+M +G D +VM + + G A+++ + ++ D +V + LC+
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226
Query: 248 HVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA---------- 295
A + M+ G V ++ T+N V+ K G++ E + E++A
Sbjct: 227 DANRALLVLRKMQDAGFVPWD-FTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLA 285
Query: 296 -------------------------EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
+G P +T++ LI G G + A E+ M++
Sbjct: 286 TTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRD 345
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
G P TN +N VI ++ + + + +K M+ P+ TY LI L + RK+ +
Sbjct: 346 HGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIRE 404
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
AL ++E+M + G+ P T S L C G A+ +Y + G ++ Y L++
Sbjct: 405 ALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMK 464
Query: 451 ---RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
+ F K LL EM+++G + Y +I GLC +G++ +++ +G
Sbjct: 465 GHINKAAFDKAYALL---AEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEG 521
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
F P+ + Y+ + N + + + SA+ +++++
Sbjct: 522 FVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 140/351 (39%), Gaps = 35/351 (9%)
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQ 282
+E G+ DA+S +L + A +L M+GK + +++V+ K G
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ R+ E+ A PD S I L + + A+ V M++ G P +N+
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
V+ + G +E + + + + ++ T L+ G R+V AL++FEE L G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL---------- 452
+VP+ T T + G P A + ++ R G S + ++++ L
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372
Query: 453 --------SGFG----------------KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
SG K L+LW +M E+G Y ++ C
Sbjct: 373 SLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC 432
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G ++ AV + E KGF P+ + Y+ L + + AY L ++K
Sbjct: 433 VNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMK 483
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 173/376 (46%), Gaps = 1/376 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y+ ++ L R + + M EGV P+L + V+++ + G V A ++ ++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ + D + ++ C++ + +A +FN M K N +TY+ +I+G G+V
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E +++E++ G P + T + I L G +DA +F MK KGC P+ Y A+
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS G + + MS PN TY LI+ L+++R++ A V M G
Sbjct: 362 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T ++ C G P AM++ + G +L Y +++ G L
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ M++ G D Y +I G C I ++E+A + E + G CP+ + Y+ L +
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541
Query: 524 ASNKLESAYNLFRKIK 539
KL++A +L +K
Sbjct: 542 KDEKLDTATSLLEHMK 557
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 177/417 (42%), Gaps = 36/417 (8%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D +Y ++ R+ D V + MAKEG P+ T S +++ +G+V +A
Sbjct: 246 MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAF 305
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ + G+ A + + LC A LF MK K NV TY +ISG
Sbjct: 306 DLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGL 365
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
G + + + +G P+++T++ LI L RI A V + M GC P+
Sbjct: 366 CVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNI 425
Query: 338 NAYNAVISNYISVGDFDECMKYYKGM---------SSYN--------------------- 367
YN +I Y +GD + M M +YN
Sbjct: 426 VTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDL 485
Query: 368 -----CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
C+P+ +YT LI G K K+ A +F EM+D G+ P+ T T+ ++ C
Sbjct: 486 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A + + ++ GC+ ++ Y +L+ L+ +L M E G + Y
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 605
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I GLC G A+ + + + +G P+ L YS L L K+E A NLF +++
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 662
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 170/384 (44%), Gaps = 8/384 (2%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K+ +V +Y ++ L + M+++GV P+ T + +++ + +
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYN 271
+ A +L + G + + N ++ C A + N+M +G N++TYN
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA-NLVTYN 464
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I G+ G R+L + G PD +++ LI G + +++ A +F+ M +
Sbjct: 465 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 524
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G P+ Y A+I Y D + M C PN+ TY LI GL K + A
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
E+ + M++ GI P+ T T+ ++ LC G A+ M+ K + GC +L Y L+R
Sbjct: 585 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 644
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L GK +L+ E++ G D Y +I G++E+A + ++ G P+
Sbjct: 645 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPT 704
Query: 512 RLVYSKL-----SNKLLASNKLES 530
Y L + LLA +L +
Sbjct: 705 LWTYGVLIKGLKNEYLLADQRLAA 728
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 121/254 (47%)
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+ Y+ ++ S+LG + +++EG P+ L ++ +I L + G + DA +
Sbjct: 178 MGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETI 237
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
+ E PDT Y ++I + D D ++ + M+ CEPN TY+ LI+GL
Sbjct: 238 MKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCD 297
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
S +V +A ++ EM+ GI+P+ T T + LC G A ++ + GC+ ++
Sbjct: 298 SGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYT 357
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y L+ L G + + L+H M G + Y +I L +++ A +V+
Sbjct: 358 YTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMG 417
Query: 505 RKGFCPSRLVYSKL 518
R G P+ + Y+++
Sbjct: 418 RNGCSPNIVTYNEM 431
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 136/310 (43%), Gaps = 45/310 (14%)
Query: 104 GVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDV 163
G+F + +I+ N + L+L++ K++ +G L PN+
Sbjct: 595 GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL---------------PNLL--- 636
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+Y+ +++ALG+ + N+ +++ + G+ PD T +++++I +G+V A LGR
Sbjct: 637 -TYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF---NVMTYNIVISGWSKL 280
+ G + LW L +K + L + V+ S
Sbjct: 696 MIKAGCQ-------PTLW---------TYGVLIKGLKNEYLLADQRLAALPDVVPNCSFG 739
Query: 281 GQVVEME--RVLKEIVAE---GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
Q + + V+ +AE G S + L+ L AGR +A E+ +M +G P
Sbjct: 740 YQTTDQDAVSVMSAKLAELDPGLSVQ--VQNALVSNLSTAGRWFEANELLGSMISQGLCP 797
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D AYN+++ + + V + D M +K MS+ CE +++ Y LI L + + +A F
Sbjct: 798 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857
Query: 396 EEMLDRGIVP 405
E ML R P
Sbjct: 858 ENMLMRTWNP 867
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%)
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
D + + G AY+A++ + +G M Y M S +PN+ Y +I+ L K
Sbjct: 168 LDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCK 227
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
VADA + +++ + + P T T TS + C +A+ ++ + K GC+ +
Sbjct: 228 DGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVT 287
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y L+ L G+ DL EM G I LC++G E+A + +
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 347
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
KG P+ Y+ L + L S L+ A LF ++
Sbjct: 348 NKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 381
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 127/310 (40%), Gaps = 25/310 (8%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y ++ + + D ++L M + G P+++T ++++ + A ++ +
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ G+ + + ++ LC+ A +FN M + L N++TY+ +I + G+V
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E E + E+ G PD +T+ +IE +G+++ A M + GC P Y +
Sbjct: 652 EEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVL 711
Query: 344 I----SNYI--------------------SVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
I + Y+ D D ++ + ++ L+
Sbjct: 712 IKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALV 771
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
S L + + +A E+ M+ +G+ P S L L AM ++K GC+
Sbjct: 772 SNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCE 831
Query: 440 LSLTAYKLLL 449
+ L YK L+
Sbjct: 832 VHLNGYKELI 841
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 181/378 (47%), Gaps = 1/378 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V +YN ++ L + C++ M ++GV P + + + ++ + G + A +
Sbjct: 432 NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVF 491
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ + GLK + + +V++ ++ A L++ M+G+ + + T NI+I+G K
Sbjct: 492 VEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKA 551
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ E + LK++V EGF P +T++ +I+G + G ++ A+ V+ M + G P+ Y
Sbjct: 552 GRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTY 611
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+I+ + + D +K M + E ++ Y LI G + + +A ++ E+ +
Sbjct: 612 TNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQE 671
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ P+ +S + AA+ ++K+ G L Y L+ L GK
Sbjct: 672 VGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLF 731
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+L+ EM G D Y +I GLCN GQLENA ++E+ RK P+ +Y+ L
Sbjct: 732 ASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLIT 791
Query: 521 KLLASNKLESAYNLFRKI 538
L+ A+ L ++
Sbjct: 792 GHFKEGNLQEAFRLHNEM 809
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 180/380 (47%), Gaps = 5/380 (1%)
Query: 164 KSYNVIV-----KALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
K NV+V K ++ D + M + G+ P+ T +++++ + G + KA
Sbjct: 325 KPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAY 384
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
++ ++++ + ++N ++ + AS LF+ + NV TYN ++S
Sbjct: 385 EIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLC 444
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G++ E + +++V +G P ++++ +I G + G +D A VF M EKG P+
Sbjct: 445 KEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLI 504
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
Y+ ++ Y GD + Y M N P+ T +I+GL K+ + +++ + +++
Sbjct: 505 TYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKL 564
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+ G +P+ T ++ G ++A+ +Y + K+G ++ Y L+
Sbjct: 565 VQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNM 624
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+ L + EM+ G D +Y +I G C G + NA ++ E G P+++VYS +
Sbjct: 625 DLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSM 684
Query: 519 SNKLLASNKLESAYNLFRKI 538
+ +E+A +L +++
Sbjct: 685 ISGFRKLQNMEAALHLHKRM 704
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 174/465 (37%), Gaps = 92/465 (19%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMC----NVLSDMAKEGVNPDLETLSIV 204
+F WA + + K V + V++ L + C N+L+ A + P S+V
Sbjct: 84 YFTWASQKRGLIKSVDALCVLLHILTKSTE---TCGKARNLLNRFASDDWGP---VPSVV 137
Query: 205 MDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL 264
+ I + R DF + D+ N +L + + A FNS+ K +
Sbjct: 138 VARLIESS----------RRLDF--ESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDI 185
Query: 265 FNVMTY-NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+T NI +S K + E V ++ ++G D T S +I R G++++A
Sbjct: 186 VPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEG 245
Query: 324 VFDTMKEKGCGPDTNAYNAVI-------SNYISVGDFDE-------------------CM 357
F K KG D AY+ VI + ++G E CM
Sbjct: 246 WFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCM 305
Query: 358 KYYKGMSSY-------NCEPNMDTY--TRLISGLLKSRKVADALEVFEEMLDRGIVPSTG 408
K K + + +C M+ T L+ G K + ALE+F++M + GI P+
Sbjct: 306 KQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNV 365
Query: 409 TITSFLEPLCSYGPPHAAMMMYK----------------------KARK----------- 435
T +E C G A +Y KAR
Sbjct: 366 TYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEA 425
Query: 436 VGCKLS-LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
V C ++ + Y LL L GK +W +M G Y +I G C G ++
Sbjct: 426 VACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMD 485
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+A V E L KG P+ + YS L + E A+ L+ +++
Sbjct: 486 SANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMR 530
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 173/376 (46%), Gaps = 1/376 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y+ ++ L R + + M EGV P+L + V+++ + G V A ++ ++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ + D + ++ C++ + +A +FN M K N +TY+ +I+G G+V
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E +++E++ G P + T + I L G +DA +F MK KGC P+ Y A+
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS G + + MS PN TY LI+ L+++R++ A V M G
Sbjct: 362 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T ++ C G P AM++ + G +L Y +++ G L
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ M++ G D Y +I G C I ++E+A + E + G CP+ + Y+ L +
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541
Query: 524 ASNKLESAYNLFRKIK 539
KL++A +L +K
Sbjct: 542 KDEKLDTATSLLEHMK 557
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 177/417 (42%), Gaps = 36/417 (8%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D +Y ++ R+ D V + MAKEG P+ T S +++ +G+V +A
Sbjct: 246 MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAF 305
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ + G+ A + + LC A LF MK K NV TY +ISG
Sbjct: 306 DLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGL 365
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
G + + + +G P+++T++ LI L RI A V + M GC P+
Sbjct: 366 CVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNI 425
Query: 338 NAYNAVISNYISVGDFDECMKYYKGM---------SSYN--------------------- 367
YN +I Y +GD + M M +YN
Sbjct: 426 VTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDL 485
Query: 368 -----CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
C+P+ +YT LI G K K+ A +F EM+D G+ P+ T T+ ++ C
Sbjct: 486 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A + + ++ GC+ ++ Y +L+ L+ +L M E G + Y
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 605
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I GLC G A+ + + + +G P+ L YS L L K+E A NLF +++
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 662
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 170/384 (44%), Gaps = 8/384 (2%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K+ +V +Y ++ L + M+++GV P+ T + +++ + +
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYN 271
+ A +L + G + + N ++ C A + N+M +G N++TYN
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA-NLVTYN 464
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I G+ G R+L + G PD +++ LI G + +++ A +F+ M +
Sbjct: 465 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 524
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G P+ Y A+I Y D + M C PN+ TY LI GL K + A
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
E+ + M++ GI P+ T T+ ++ LC G A+ M+ K + GC +L Y L+R
Sbjct: 585 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 644
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L GK +L+ E++ G D Y +I G++E+A + ++ G P+
Sbjct: 645 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPT 704
Query: 512 RLVYSKL-----SNKLLASNKLES 530
Y L + LLA +L +
Sbjct: 705 LWTYGVLIKGLKNEYLLADQRLAA 728
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 121/252 (48%)
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
+ Y+ ++ S+LG + +++EG P+ L ++ +I L + G + DA +
Sbjct: 180 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMK 239
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
+ E PDT Y ++I + D D ++ + M+ CEPN TY+ LI+GL S
Sbjct: 240 KVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSG 299
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+V +A ++ EM+ GI+P+ T T + LC G A ++ + GC+ ++ Y
Sbjct: 300 RVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYT 359
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+ L G + + L+H M G + Y +I L +++ A +V+ R
Sbjct: 360 ALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRN 419
Query: 507 GFCPSRLVYSKL 518
G P+ + Y+++
Sbjct: 420 GCSPNIVTYNEM 431
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 136/310 (43%), Gaps = 45/310 (14%)
Query: 104 GVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDV 163
G+F + +I+ N + L+L++ K++ +G L PN+
Sbjct: 595 GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL---------------PNLL--- 636
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+Y+ +++ALG+ + N+ +++ + G+ PD T +++++I +G+V A LGR
Sbjct: 637 -TYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF---NVMTYNIVISGWSKL 280
+ G + LW L +K + L + V+ S
Sbjct: 696 MIKAGCQ-------PTLW---------TYGVLIKGLKNEYLLADQRLAALPDVVPNCSFG 739
Query: 281 GQVVEME--RVLKEIVAE---GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
Q + + V+ +AE G S + L+ L AGR +A E+ +M +G P
Sbjct: 740 YQTTDQDAVSVMSAKLAELDPGLSVQ--VQNALVSNLSTAGRWFEANELLGSMISQGLCP 797
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D AYN+++ + + V + D M +K MS+ CE +++ Y LI L + + +A F
Sbjct: 798 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857
Query: 396 EEMLDRGIVP 405
E ML R P
Sbjct: 858 ENMLMRTWNP 867
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%)
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
D + + G AY+A++ + +G M Y M S +PN+ Y +I+ L K
Sbjct: 168 LDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCK 227
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
VADA + +++ + + P T T TS + C +A+ ++ + K GC+ +
Sbjct: 228 DGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVT 287
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y L+ L G+ DL EM G I LC++G E+A + +
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 347
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
KG P+ Y+ L + L S L+ A LF ++
Sbjct: 348 NKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 381
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 130/310 (41%), Gaps = 25/310 (8%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y ++ + + D ++L M + G P+++T ++++ + A ++ +
Sbjct: 532 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ G+ + + ++ LC+ A +FN M + L N++TY+ +I + G+V
Sbjct: 592 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 651
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E E + E+ G PD +T+ +IE +G+++ A M + GC P Y +
Sbjct: 652 EEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVL 711
Query: 344 IS---NYISVGD---------FDECMKYYKG--------MSSYNCE--PNMDTYTR--LI 379
I N + D C Y+ MS+ E P + + L+
Sbjct: 712 IKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALV 771
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
S L + + +A E+ M+ +G+ P S L L AM ++K GC+
Sbjct: 772 SNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCE 831
Query: 440 LSLTAYKLLL 449
+ L YK L+
Sbjct: 832 VHLNGYKELI 841
>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 804
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 180/405 (44%), Gaps = 15/405 (3%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FF +K + V S+N+++ L + SDM K GV PD T +I++ F
Sbjct: 263 FFCTVLK-CGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGF 321
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFN 266
G + A +++ + D GL D + ++L CQ ++ L M +G L +
Sbjct: 322 HLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKS 381
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
++ Y++++SG K G+V E + ++ A G +PD + +S +I GL + G+ D A+ V+D
Sbjct: 382 IIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYD 441
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
M K P++ A++ G E + S ++ Y +I G KS
Sbjct: 442 EMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSG 501
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+ +ALE+F+ ++ GI P+ T S + C A + + G S+ +Y
Sbjct: 502 CIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYT 561
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL-- 504
L+ + G + +L EM+ G P Y + GLC +LEN V+ E +
Sbjct: 562 TLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILE 621
Query: 505 ----------RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+G P ++ Y+ + L L A+ LF+K+K
Sbjct: 622 KFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMK 666
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 170/387 (43%), Gaps = 16/387 (4%)
Query: 161 KDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
K + Y+V++ L + D ++ D+ G+ PDL SIV+ + G+ A+++
Sbjct: 380 KSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRV 439
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWS 278
+ + ++ +L ++ LCQ+ + A SL +S+ G L +++ YNIVI G++
Sbjct: 440 YDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTL-DIILYNIVIDGYA 498
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G + E + K + G +P+ TF+ LI G + I +A ++ D +K G P
Sbjct: 499 KSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVV 558
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE- 397
+Y ++ Y + G + + M + P TY+ + GL + K+ + +V E
Sbjct: 559 SYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRER 618
Query: 398 -----------MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
M GI P T + ++ LC A ++KK + + Y
Sbjct: 619 ILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYN 678
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
+L+ L +G + +Q+ Y VI C G E AV++ + L +
Sbjct: 679 ILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDR 738
Query: 507 GFCPSRLVYSKLSNKLLASN-KLESAY 532
GF S YS + N+L + +ES Y
Sbjct: 739 GFNVSIRDYSAVINRLCRRHLAIESKY 765
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 170/397 (42%), Gaps = 34/397 (8%)
Query: 124 NVDLSLDVVGKVVNRG-----------NLSG--------EAMVLFFNWAIKHPNVAKDVK 164
N+D+ L ++ +++RG LSG EA+ LF++ ++ + D+
Sbjct: 361 NIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYD--LEAYGLTPDLV 418
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y++++ L + FD V +M + + P+ TL +M + G + +A +L L
Sbjct: 419 AYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSL 478
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN-SMKGKVLFNVMTYNIVISGWSKLGQV 283
G D N+V+ + + A LF +++ + NV T+N +I G+ K +
Sbjct: 479 ISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNI 538
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E ++L I G P ++++ L++ G I E+ MK +G P Y+ +
Sbjct: 539 AEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVI 598
Query: 344 ISNYISVGDFDECMKYYK------------GMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
+ C + + M S P+ TY +I L + + ++ A
Sbjct: 599 FKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRA 658
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
E+F++M + + P++ T ++ LC YG A +K LS AY +++
Sbjct: 659 FELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKA 718
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
G M + L++++ + G+ Y VI LC
Sbjct: 719 HCVKGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLC 755
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 159/351 (45%), Gaps = 19/351 (5%)
Query: 174 GRRKFFDFMCNVLSDMAKEGVNPDL--------ETLSIVMDSFI----RAGQVYKAIQML 221
G+R+F + + + +EG +L E+ +V D + R V +++ +L
Sbjct: 107 GQRRFKELQVILEQLLQEEGKLCELLSNSFRKWESTGLVWDMLLFLSSRLRMVDESLYIL 166
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLG 281
+++D L +S N VL+ + ++ +K K N TY+ V+ G +
Sbjct: 167 KKMKDRNLNVSTQSYNSVLYNFRE---TDKMWDVYKEIKDK---NEHTYSTVVDGLCRQQ 220
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ + L+ + P ++F+ ++ + G +D A F T+ + G P ++N
Sbjct: 221 KLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHN 280
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I+ VG E ++ M+ + EP+ TY L+ G ++ A EV ++MLD+
Sbjct: 281 ILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDK 340
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL-SLTAYKLLLRRLSGFGKCGM 460
G+ P T T L C G +++ K G +L S+ Y ++L L G+
Sbjct: 341 GLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDE 400
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L L+++++ G D Y VI GLC +G+ + AV V +E K P+
Sbjct: 401 ALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPN 451
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 108/242 (44%), Gaps = 10/242 (4%)
Query: 280 LGQVVEMERVLKEIVAEGF---SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
L Q+++ E L E+++ F L + L+ R +D+++ + MK++
Sbjct: 118 LEQLLQEEGKLCELLSNSFRKWESTGLVWDMLLFLSSRLRMVDESLYILKKMKDRNLNVS 177
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
T +YN+V+ N+ + D+ YK + + N TY+ ++ GL + +K+ DA+
Sbjct: 178 TQSYNSVLYNF---RETDKMWDVYKEIK----DKNEHTYSTVVDGLCRQQKLEDAVLFLR 230
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+ I PS + S + C G A + K G S+ ++ +L+ L G
Sbjct: 231 TSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVG 290
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
L+L +M + G D Y ++ G +G + A V+++ L KG P + Y+
Sbjct: 291 SIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYT 350
Query: 517 KL 518
L
Sbjct: 351 IL 352
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 15/196 (7%)
Query: 165 SYNVIVKALGR------------RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+Y+VI K L R + + +VL DM EG+ PD T + ++ R
Sbjct: 594 TYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVK 653
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYN 271
+ +A ++ +++ L + + N+++ LC + A S++ + V + Y
Sbjct: 654 HLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYT 713
Query: 272 IVISGWSKLGQVVEMERVL-KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
VI G EM +L +++ GF+ +S +I L R ++ F M
Sbjct: 714 TVIKAHCVKGDP-EMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLS 772
Query: 331 KGCGPDTNAYNAVISN 346
+G PD + +I +
Sbjct: 773 RGISPDLDICEVMIKS 788
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 13/431 (3%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
FL+ + KG I D + + +G+ N + G ++ D S
Sbjct: 91 FLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMG---------ILEESGAVIDANS 141
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YNV++ A + + VL + V P+ T V+ S G++ +A+Q+L R
Sbjct: 142 YNVLINAYCKSGEIEEALRVLDHTS---VAPNAATYDAVLCSLCDRGKLKQAMQVLDRQL 198
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
D + V++ C+ VG A LFN M+GK +V+TYN++I G+ K G++
Sbjct: 199 QSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLD 258
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E LK++ + G D ++ + ++ L GR DA+++ TM KGC P +N +I
Sbjct: 259 EAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILI 318
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ G + + + M + PN ++ LI G + + A+E E M+ RG
Sbjct: 319 NFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCY 378
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P T L LC G A+++ + GC SL +Y ++ L GK + ++L
Sbjct: 379 PDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVEL 438
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
EM G D V+ GL G++ A+ G P+ +Y+ + L
Sbjct: 439 LEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCK 498
Query: 525 SNKLESAYNLF 535
+ + A +
Sbjct: 499 AQQTSLAIDFL 509
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 180/386 (46%), Gaps = 6/386 (1%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIK-HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDM 189
V+ + +RG L VL K +P DV + V++ A + + ++M
Sbjct: 177 VLCSLCDRGKLKQAMQVLDRQLQSKCYP----DVVTCTVLIDATCKESGVGQAMKLFNEM 232
Query: 190 AKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHV 249
+G PD+ T ++++ F + G++ +AI L +L +G + D S N++L LC
Sbjct: 233 RGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRW 292
Query: 250 GAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
A L +M K F +V+T+NI+I+ + G + + VL+ + G +P+S +F+ L
Sbjct: 293 MDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPL 352
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I+G ID AIE + M +GC PD YN +++ G D+ + +SS C
Sbjct: 353 IQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGC 412
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P++ +Y +I GLLK K A+E+ EEM +G+ P T TS + L G H A+
Sbjct: 413 SPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIK 472
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ + G K + Y ++ L + + +D +M +G Y +I G+
Sbjct: 473 FFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGIT 532
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLV 514
G E A + E +G L+
Sbjct: 533 YEGLAEEASKLSNELYSRGLVKKSLI 558
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 150/362 (41%), Gaps = 44/362 (12%)
Query: 177 KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESL 236
+F ++M N +G PD+ + ++ F + G+ A +++G LE+ G DA S
Sbjct: 90 RFLEYMTN-------KGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANS- 141
Query: 237 NVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAE 296
YN++I+ + K G++ E RVL
Sbjct: 142 ---------------------------------YNVLINAYCKSGEIEEALRVLDHT--- 165
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
+P++ T+ ++ L G++ A++V D + C PD +I +
Sbjct: 166 SVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQA 225
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
MK + M C+P++ TY LI G K ++ +A+ +++ G + L
Sbjct: 226 MKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRS 285
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
LCS G AM + + GC S+ + +L+ L G G L++ M + G+ +
Sbjct: 286 LCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPN 345
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
+ +I G CN ++ A+ +E + +G P + Y+ L L K++ A +
Sbjct: 346 SRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILS 405
Query: 537 KI 538
++
Sbjct: 406 QL 407
>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 412
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 178/381 (46%), Gaps = 22/381 (5%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +YN ++K L R V+ I++D + G +A ++
Sbjct: 44 DIVTYNTLIKGLCR------------------VHRISVATCIIIDGLCKVGHEDEAKEIF 85
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++ G+ + S + ++ C + + LFN M + V N++ +N++I K
Sbjct: 86 EEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKE 145
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+V+E +++L+ + G D +T++ LI+G + G + A ++F +M KGC + +Y
Sbjct: 146 GKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISY 205
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+I+ Y + +E M Y M PN+ TY+ L++GLL++ KV DA ++F M
Sbjct: 206 TILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKA 265
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
GI + FL+ LC G AM ++ + + KL +Y L+ L GK +
Sbjct: 266 SGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEI 325
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV---MEESLRKGFCPSRLVYSK 517
+ + ++ + G + +I G C + Q++ A ++ ME+ G P + Y+
Sbjct: 326 AWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNT 385
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L SNKLE NL K+
Sbjct: 386 LLRGFCESNKLEEVVNLLHKM 406
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 179/374 (47%), Gaps = 18/374 (4%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLN----------- 237
M G++PDL TL+I+ + +V + + + + G D + N
Sbjct: 1 MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60
Query: 238 ------VVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVL 290
+++ LC+ H A +F MK + ++ NV++Y+ ++ G+ G++ E +R+
Sbjct: 61 ISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLF 120
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
E+V +G P+ + F+ LI+ L + G++ +A ++ + ++G D YN++I + +
Sbjct: 121 NEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKI 180
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
GD K + M S CE N +YT LI+G K KV +A+ ++ EM G P+ T
Sbjct: 181 GDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTY 240
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
++ L L G A ++ + G + Y + L L G ++L++E++
Sbjct: 241 STLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKS 300
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
+ D E Y +I GLC G++E A ++ ++G P+ + + + + +++
Sbjct: 301 YNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDK 360
Query: 531 AYNLFRKIKIARQN 544
A LF K++ +N
Sbjct: 361 ANILFEKMEKMEEN 374
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 184/382 (48%), Gaps = 6/382 (1%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
+GN +GE M + IK + ++ ++N+ + L + + +V+ D+ G +P+
Sbjct: 177 KGNETGE-MQYVYKEMIKR-RIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPN 234
Query: 198 LETLSIVMDSFIR---AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
+ T + ++D + AG++Y+A +L + + + + N ++ C+ +V AA +
Sbjct: 235 IVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKN 294
Query: 255 LFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
F M+ + L N++TYN +I+G S G++ E + ++V G P+ +TF+ LI G
Sbjct: 295 AFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFC 354
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+ I +A ++FD + E+ P+ +N +I + G +E + M PN+
Sbjct: 355 KKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVS 414
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
TY LI+GL +++ V A ++ EM + + T + C G P A + +
Sbjct: 415 TYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEM 474
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
VG K + Y L+ G L + +M++ G ++ Y +I G C G+L
Sbjct: 475 LNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKL 534
Query: 494 ENAVLVMEESLRKGFCPSRLVY 515
E+A ++ E L KG P+R Y
Sbjct: 535 EDANRLLNEMLEKGLNPNRTTY 556
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 195/451 (43%), Gaps = 64/451 (14%)
Query: 141 LSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
+ E ++ FF W+ K ++ +++ ++ L K + + + L + K + T
Sbjct: 56 VDSELVLRFFQWSQKEFRISYGLETTGKVLHLLANSKKYSKVRSFLDKLVKN----EKHT 111
Query: 201 LSIVMDSFIRAG---------------------QVYKAIQMLGRLEDFGLKFDAESLNVV 239
+S V S + G +++ A ++ R++D+G K S N +
Sbjct: 112 VSSVFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPL 171
Query: 240 LWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
L L + G ++ M K ++ N+ T+NI I+G K G++ + E V+++I A GF
Sbjct: 172 LSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGF 231
Query: 299 SPDSLTFSFLIEGL---GRAGRI--DDAI------------------------------- 322
SP+ +T++ LI+G G AG++ DAI
Sbjct: 232 SPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLA 291
Query: 323 --EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
F+ M+ +G P+ YN++I+ + G DE + + M +PN+ T+ LI+
Sbjct: 292 AKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALIN 351
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
G K + + +A ++F+++ ++ +VP+ T + ++ C G ++ G
Sbjct: 352 GFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFP 411
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+++ Y L+ L L +EM+ +D Y +I G C G+ A ++
Sbjct: 412 NVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLL 471
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
E L G P+ + Y+ L + L++A
Sbjct: 472 GEMLNVGVKPNHVTYNTLMDGYCMEGNLKAA 502
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 10/233 (4%)
Query: 119 ALWNVNVDLSLD----VVGKVVN---RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVK 171
ALW+ V L L ++N + + EA LF + I ++ + ++N ++
Sbjct: 329 ALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDD--IAEQDLVPNAITFNTMID 386
Query: 172 ALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF 231
A + + + + M EG+ P++ T + ++ R V A ++L +E++ LK
Sbjct: 387 AFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKA 446
Query: 232 DAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVL 290
D + N+++ C+ A L M V N +TYN ++ G+ G + +V
Sbjct: 447 DVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVR 506
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
++ EG + +T++ LI+G + G+++DA + + M EKG P+ Y+ V
Sbjct: 507 TQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 105/233 (45%), Gaps = 19/233 (8%)
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
I A EVF +++ G N+ N ++S + + E YK M +PN+ T+
Sbjct: 145 EIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFN 204
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK---- 432
I+GL K+ K+ A +V E++ G P+ T + ++ C G +A MY+
Sbjct: 205 IFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKG---SAGKMYRADAIL 261
Query: 433 ----ARKVGCKLSLTAYKLLLRRLSGFGKCGMLL---DLWHEMQESGYPSDGEIYEYVIA 485
A K+ C +T L + GF K +L + + EMQ G + Y +I
Sbjct: 262 KEMLANKI-CPNEITFNTL----IDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLIN 316
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GL N G+L+ A+ + ++ + G P+ + ++ L N ++ A LF I
Sbjct: 317 GLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDI 369
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 113/272 (41%), Gaps = 8/272 (2%)
Query: 271 NIVISGWSKLGQVVEME-----RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N +I+ L V +E V + + GF + + L+ L + + V+
Sbjct: 129 NALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVY 188
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK- 384
M ++ P+ +N I+ G ++ + + ++ PN+ TY LI G K
Sbjct: 189 KEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKK 248
Query: 385 --SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+ K+ A + +EML I P+ T + ++ C AA +++ ++ G K ++
Sbjct: 249 GSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNI 308
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L+ LS GK + LW +M G + + +I G C ++ A + ++
Sbjct: 309 VTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDD 368
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
+ P+ + ++ + + + +E + L
Sbjct: 369 IAEQDLVPNAITFNTMIDAFCKAGMMEEGFAL 400
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 94/213 (44%), Gaps = 8/213 (3%)
Query: 334 GPDTNAYNAVISN-----YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
G D NA+I++ Y++ + + ++ + Y + ++++ L+S L+K +
Sbjct: 122 GGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNET 181
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+ V++EM+ R I P+ T F+ LC G + A + + + G ++ Y L
Sbjct: 182 GEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTL 241
Query: 449 LRRLSGFGKCGMLL---DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+ G G + + EM + + + +I G C + A EE R
Sbjct: 242 IDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQR 301
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+G P+ + Y+ L N L + KL+ A L+ K+
Sbjct: 302 QGLKPNIVTYNSLINGLSNNGKLDEAIALWDKM 334
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 71/165 (43%), Gaps = 3/165 (1%)
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
L+ + + ++ A EVF + D G S + L L +YK+ K
Sbjct: 136 LVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRR 195
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC---NIGQLE 494
+ +LT + + + L GK D+ +++ G+ + Y +I G C + G++
Sbjct: 196 IQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMY 255
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
A +++E L CP+ + ++ L + + +A N F +++
Sbjct: 256 RADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQ 300
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 176/382 (46%), Gaps = 1/382 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D+ SY ++V A + D N + +M + P++ T + ++D ++ G V A
Sbjct: 252 ILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAK 311
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
++L + + G+ ++ + +++ C+R + A L M K LF + Y ++I +
Sbjct: 312 KVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAY 371
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
G+V + R+ ++ G +++ + LI G + G ++ A EV +MK+ PD+
Sbjct: 372 CTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDS 431
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN ++ + DF + K M + + TY L+ L V AL ++
Sbjct: 432 YGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNL 491
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M RG+ P+ T + L+ G AMM++K A G S+T Y ++ K
Sbjct: 492 MHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEK 551
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+++ +M+E G+P D Y +I G C +G L A+ + + S R G S +Y+
Sbjct: 552 LVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNS 611
Query: 518 LSNKLLASNKLESAYNLFRKIK 539
L + S +L+ L ++K
Sbjct: 612 LITGVFRSEELQKLNGLLAEMK 633
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 112/477 (23%), Positives = 196/477 (41%), Gaps = 55/477 (11%)
Query: 118 DALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR-- 175
DAL N++ S +++ V+ L+ +A + FF A K P DV SY IV L R
Sbjct: 87 DALANLSFSFSNELMDLVLRNLRLNPDASLEFFKLASKQPKFRPDVSSYCKIVHILSRAR 146
Query: 176 ---------------------------------RKF------FD-------------FMC 183
R+F FD F
Sbjct: 147 MYKEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSPTVFDMILKVFAEKGMTKFAL 206
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
V +M K G P L + + ++ + ++ G+ +KA+ + ++ G+ D S +++
Sbjct: 207 CVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAY 266
Query: 244 CQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C+ V A + M+ NV+TYN +I G+ LG V ++VL + +G +S
Sbjct: 267 CKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENS 326
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
T++ LI+G + G+++ A ++ M EK D + Y +I Y + G D+ ++
Sbjct: 327 RTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDA 386
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M + N LI+G K V A EV M D + P + + L+ C
Sbjct: 387 MLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQED 446
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A + + G ++ Y LL+ L G L +W+ M + G + Y
Sbjct: 447 FIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCT 506
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ +G + A+++ +++L KGF S +Y+ + KL A +F K+K
Sbjct: 507 LLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMK 563
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 185/404 (45%), Gaps = 4/404 (0%)
Query: 136 VNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
V+ G++ G VL + + ++ ++Y +++K +R + ++ M ++ +
Sbjct: 302 VSLGDVCGAKKVLAL---MSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLF 358
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
D +++ ++ AG+V A+++ + GLK + N ++ C+ HV A+ +
Sbjct: 359 VDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEV 418
Query: 256 FNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
SMK + + YN ++ G+ K ++ ++ E+ +G + +T++ L++ L
Sbjct: 419 LVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFH 478
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G ++ A+ +++ M ++G P+ Y ++ + VG FD M +K S ++
Sbjct: 479 VGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITL 538
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y +I G K K+ A E+F +M + G P T + ++ C G A+ + +
Sbjct: 539 YNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSE 598
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
+ G S Y L+ + + L L EM+ + Y +IAG C+ G ++
Sbjct: 599 RDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMD 658
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
A + + KG P+ ++ SK+ + L K++ A + +I
Sbjct: 659 KAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQI 702
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 132/285 (46%), Gaps = 1/285 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K+ ++ +V +Y ++ + D N M +G+ P++ S ++ S R G+
Sbjct: 632 MKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGK 691
Query: 214 VYKAIQMLGRLEDFG-LKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNI 272
+ +A +L ++ D + A S+ + L S + N + YNI
Sbjct: 692 IDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNI 751
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
I+G K + ++ R+L +++ +GF PD+ T+ LI G++++A + D M G
Sbjct: 752 AITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAG 811
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ YNA+I+ G+ D + + ++ P + TY LI G K + +AL
Sbjct: 812 LVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEAL 871
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
E+ ++M + GI PS+ T ++ + L G ++ + + K G
Sbjct: 872 ELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 162/386 (41%), Gaps = 13/386 (3%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
K + YN ++ + + + M + G PD T ++D + + G + +A++
Sbjct: 533 TKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALK 592
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWS 278
+ E G+ E N ++ + + + + L MK + L NV+TY +I+GW
Sbjct: 593 LKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWC 652
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
G + + +++ +G +P+ + S ++ L R G+ID+A + + + D
Sbjct: 653 DKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIAD----IDPI 708
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEP------NMDTYTRLISGLLKSRKVADAL 392
A +A S + D ++ K + S+ + N Y I+GL KS+ + D
Sbjct: 709 AAHAH-SVELPKSDLRH-LETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVR 766
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+ ++L +G P T S + + G + A + G ++ Y L+ L
Sbjct: 767 RILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGL 826
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G L++++ G Y +I G C G+ A+ + ++ +G CPS
Sbjct: 827 CKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSS 886
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKI 538
+ YS L + L K E + L ++
Sbjct: 887 ITYSTLIHGLYMEGKSEQSVGLLNEM 912
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 158/374 (42%), Gaps = 38/374 (10%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +YN ++K L + ++ + M K GV P+ T ++D+F + G +A+ +
Sbjct: 466 VVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWK 525
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--NVMTYNIVISGWSKL 280
G N ++ C+ + A +F MK ++ F + +TY +I G+ K+
Sbjct: 526 DALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMK-ELGFPPDEITYRTLIDGYCKV 584
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G +VE ++ +G S + ++ LI G+ R+ + + MK + P+ Y
Sbjct: 585 GNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTY 644
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++I+ + G D+ Y M PN+ ++++S L + K+ +A + ++ D
Sbjct: 645 GSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIAD 704
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
++P+ ++ H+ + R + + + + FGK M
Sbjct: 705 -------------IDPIAAHA--HSVELPKSDLRHLETQ----------KIVDSFGKKAM 739
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ + S+ +Y I GLC +++ ++ + L KGFCP Y L +
Sbjct: 740 SIPI----------SNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIH 789
Query: 521 KLLASNKLESAYNL 534
A K+ A+ L
Sbjct: 790 ACSAVGKVNEAFCL 803
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 1/170 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN+ + L + K D + +LSD+ +G PD T ++ + G+V +A + +
Sbjct: 749 YNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMI 808
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVV 284
+ GL + N ++ LC+ ++ A LFN + K L V+TYN +I G+ K G+
Sbjct: 809 NAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTT 868
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
E + ++ EG P S+T+S LI GL G+ + ++ + + M + G G
Sbjct: 869 EALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGKG 918
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%)
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
+++ ++ I GL ++ IDD + + KG PD Y ++I +VG +E
Sbjct: 745 NNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLR 804
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
M + PN+ Y LI+GL KS + A +F ++ +G+ P+ T + ++ C
Sbjct: 805 DDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKG 864
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
G A+ + K R+ G S Y L+ L GK + L +EM ++G
Sbjct: 865 GRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 193/437 (44%), Gaps = 36/437 (8%)
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
VL+ ++ V +V SY + ++ LG+ K FD +L+ M EG PD+ T ++++
Sbjct: 249 VLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQ 308
Query: 207 SFIRAGQVYKA-------------------IQMLGRLEDFG-----------LKFDAESL 236
AG++ A I +L + D G +K D +
Sbjct: 309 VLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYND 368
Query: 237 NVVLW-----CLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVL 290
NVV + LCQ V A +F+ MK K ++ +YN +ISG+ K + + +
Sbjct: 369 NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELF 428
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
K + G P+ T I G++G AI+ ++ MK KG PD A NAV+
Sbjct: 429 KHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKS 488
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
G + + + + P+ TYT +I K+ K +A+++F +M++ VP +
Sbjct: 489 GRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAV 548
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
S ++ L G A ++ + +++ + + Y LL L GK ++ L EM
Sbjct: 549 NSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYH 608
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
S YP + Y ++ LC G + +A+ ++ KG P Y+ + L+ +
Sbjct: 609 SNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNE 668
Query: 531 AYNLFRKIKIARQNDYA 547
A+++F ++K DYA
Sbjct: 669 AFSIFCQMKKVLIPDYA 685
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 194/469 (41%), Gaps = 53/469 (11%)
Query: 110 LKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVI 169
+K KG++ D + V L G++ G A +F +K V+ D +Y ++
Sbjct: 466 MKSKGIVPDVVAGNAVLFGLAKSGRL-------GMAKRVFHE--LKAMGVSPDTITYTMM 516
Query: 170 VKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGL 229
+K + FD + DM + PD+ ++ ++D+ +AG+ +A ++ +L++ L
Sbjct: 517 IKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNL 576
Query: 230 KFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMER 288
+ + N +L L + V L M N++TYN ++ K G V +
Sbjct: 577 EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALD 636
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
+L + +G PD +++ +I GL + R ++A +F MK K PD ++ +++
Sbjct: 637 MLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFV 695
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDT---------------------------------- 374
+G E + K Y +P T
Sbjct: 696 KIGLMKEALHIIK---DYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGIT 752
Query: 375 -----YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
LI L K +K +A E+ ++ G+ TG S + L A +
Sbjct: 753 LDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGL 812
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ + +++GC Y LLL + + +L + EM GY S Y +I+GL
Sbjct: 813 FAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVK 872
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+LE A+ + + +GF P+ Y L + LL + ++E A NLF ++
Sbjct: 873 SRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 921
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 148/320 (46%), Gaps = 3/320 (0%)
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEI 293
S N +L + VG + +F+ M+ +++ NV T+ + G G + L +
Sbjct: 127 SCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVM 186
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
G ++ T++ L+ L ++G +A+EV+ M G P Y+ ++ + D
Sbjct: 187 KEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDV 246
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
+ + + M ++ +PN+ +YT I L ++++ +A + +M + G P T T
Sbjct: 247 ETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVL 306
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
++ LC G A ++ K +K K Y LL + G ++++W+ M+ GY
Sbjct: 307 IQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGY 366
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
+ Y VI LC +G++ A+ + +E +KG P + Y+ L + L +++ A
Sbjct: 367 NDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALE 426
Query: 534 LFRKIKI--ARQNDYARRLW 551
LF+ + I + N Y L+
Sbjct: 427 LFKHMDIHGPKPNGYTHVLF 446
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 152/328 (46%), Gaps = 9/328 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ SYN ++ L + + ++ ++ M K + PD TL ++ SF++ G + +A+ ++
Sbjct: 649 DLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHII 707
Query: 222 GRLEDF----GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
+D+ G K D S + ++ + ++ + + + + + +I
Sbjct: 708 ---KDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKH 764
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K + +E ++K+ + G S + ++ LI GL ID A +F MKE GCGPD
Sbjct: 765 LCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPD 824
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN ++ +E +K + M E TY +ISGL+KSR++ A++++
Sbjct: 825 EFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYY 884
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
++ +G P+ T L+ L G A ++ + + GCK + T Y +LL G
Sbjct: 885 NLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAG 944
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVI 484
+ L+ +M + G D + Y +I
Sbjct: 945 NTEKVCHLFQDMVDQGINPDIKSYTIII 972
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/461 (21%), Positives = 187/461 (40%), Gaps = 71/461 (15%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F A + P VA S N +++ + M V M ++ V ++ T + +
Sbjct: 112 FRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLG 171
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVM 268
G + A L +++ G+ +A + N +++ L + A ++ M V+ +V
Sbjct: 172 VEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVR 231
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TY++++ + K V + +L+E+ A G P+ +++ I LG+A R D+A + M
Sbjct: 232 TYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKM 291
Query: 329 KEKGCGPDTNAYNAVIS----------------------------NYISV-------GDF 353
+ +GC PD + +I YI++ GD
Sbjct: 292 ENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDS 351
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS----TGT 409
M+ + M + N+ YT +I L + +V +ALE+F+EM +GIVP
Sbjct: 352 QSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 411
Query: 410 ITSFLEP------------LCSYGP-PHA------------------AMMMYKKARKVGC 438
I+ FL+ + +GP P+ A+ Y+ + G
Sbjct: 412 ISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGI 471
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ A +L L+ G+ GM ++HE++ G D Y +I + + AV
Sbjct: 472 VPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVK 531
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + + P L + L + L + + + A+ +F ++K
Sbjct: 532 IFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLK 572
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 165/396 (41%), Gaps = 3/396 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA +F+ +K N+ +YN ++ LGR + ++L +M P+L T +
Sbjct: 563 EAWRIFYQ--LKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 620
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++D + G V A+ ML + G D S N V++ L + A S+F MK +
Sbjct: 621 ILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVL 680
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKE-IVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ + T ++ + K+G + E ++K+ + G D + L+EG+ + I+ +I
Sbjct: 681 IPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSI 740
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
E + + G D +I + E + K S+ Y LI GL
Sbjct: 741 EFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGL 800
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+ + A +F EM + G P T L+ + + + ++ + G + +
Sbjct: 801 VDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTY 860
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y ++ L + +DL++ + G+ Y ++ GL G++E+A + E
Sbjct: 861 VTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 920
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
L G + +Y+ L N + E +LF+ +
Sbjct: 921 MLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDM 956
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 114/251 (45%), Gaps = 11/251 (4%)
Query: 169 IVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
I+K G K +F +A G+ D L ++ + + +A +++ + + FG
Sbjct: 730 ILKKAGIEKSIEFA----EIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFG 785
Query: 229 LKFDAESLNVVLWCLCQRLHVGAASSLFNSMK----GKVLFNVMTYNIVISGWSKLGQVV 284
+ N ++ L + A LF MK G F TYN+++ K ++
Sbjct: 786 VSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEF---TYNLLLDAMGKSMRIE 842
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
EM +V +E+ +G+ +T++ +I GL ++ R++ AI+++ + +G P Y ++
Sbjct: 843 EMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLL 902
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ G ++ + M Y C+ N Y L++G + +F++M+D+GI
Sbjct: 903 DGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGIN 962
Query: 405 PSTGTITSFLE 415
P + T ++
Sbjct: 963 PDIKSYTIIID 973
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 187/411 (45%), Gaps = 14/411 (3%)
Query: 140 NLSG--EAMVLFFNWAIKH----PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG 193
+LSG E +L F W H N+ D + ++V+ LGR + + E
Sbjct: 151 DLSGNWERALLLFEWGWLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEK 210
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA- 252
+ D+ + ++ S+ R G+ +AI + G++++ GL + NV+L + +G +
Sbjct: 211 YSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGK---MGRSW 267
Query: 253 ---SSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
L + M+ K L + T + VIS + G + E + L E+ G+ P ++T++ +
Sbjct: 268 DRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSM 327
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
++ G+AG +A+ + M++ C PD+ YN + + Y+ G DE M M+S
Sbjct: 328 LQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGV 387
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
PN TYT +I K+ + DAL +F M D G P+ T S L L +
Sbjct: 388 MPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIK 447
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ + + GC + + +L S GK + + EM+ G+ D + + +I+
Sbjct: 448 VLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYA 507
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G ++ + E ++ GF P Y+ L N L ++A ++ + ++
Sbjct: 508 RCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMR 558
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 169/366 (46%), Gaps = 16/366 (4%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY-KAIQM 220
DV++Y I+ + R + ++ M + G++P L T ++++D + + G+ + + +++
Sbjct: 214 DVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILEL 273
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN-----VMTYNIVIS 275
L + GL+ D + + V+ + + A +K FN +TYN ++
Sbjct: 274 LDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELK----FNGYKPGTVTYNSMLQ 329
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
+ K G E +LKE+ PDS+T++ L RAG +D+ + V DTM KG P
Sbjct: 330 VFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMP 389
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+ Y VI Y G D+ ++ + M C PN+ TY +++ L K + D ++V
Sbjct: 390 NAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVL 449
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
EM G P+ T + L G + + ++ + G + + L +S +
Sbjct: 450 CEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTL---ISAY 506
Query: 456 GKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
+CG +D ++ EM +SG+ Y ++ L G + A V+++ KGF P+
Sbjct: 507 ARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNE 566
Query: 513 LVYSKL 518
YS L
Sbjct: 567 NSYSLL 572
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 173/395 (43%), Gaps = 36/395 (9%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N D +YN + R F D V+ M +GV P+ T + V+D++ +AG+ A
Sbjct: 351 NCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDA 410
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISG 276
+++ ++D G + + N VL L ++ + MK N T+N +++
Sbjct: 411 LRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAV 470
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
S+ G+ + +VL+E+ GF PD TF+ LI R G D+ +++ M + G P
Sbjct: 471 CSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPC 530
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YNA+++ GD+ + M + +PN ++Y+ L+ K+ V +V +
Sbjct: 531 VTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEK 590
Query: 397 EMLDRGIVPS-----TGTITSF-----------LEPLCSYG-PPHAAMM----------- 428
E+ D + PS T +T+ + L YG P ++
Sbjct: 591 EIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNK 650
Query: 429 MYKKARKV-------GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
M+ KAR++ G + +L Y L+ G+C ++ +Q SG D Y
Sbjct: 651 MFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYN 710
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
VI G C G ++ A+ V+ E KG P+ + Y+
Sbjct: 711 TVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYN 745
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 169/378 (44%), Gaps = 5/378 (1%)
Query: 165 SYNVIVKALGRR-KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+YNV++ G+ + +D + +L +M +G+ D T S V+ + R G + +A + L
Sbjct: 252 TYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAE 311
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQ 282
L+ G K + N +L + A S+ M+ + +TYN + + + + G
Sbjct: 312 LKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGF 371
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ E V+ + ++G P+++T++ +I+ G+AGR DDA+ +F MK+ GC P+ YN+
Sbjct: 372 LDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNS 431
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
V++ ++ +K M C PN T+ +++ + K +V EM + G
Sbjct: 432 VLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCG 491
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P T + + G + MY + K G +T Y LL L+ G
Sbjct: 492 FEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAE 551
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL---S 519
+ +M+ G+ + Y ++ G ++ V +E PS ++ L +
Sbjct: 552 SVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTN 611
Query: 520 NKLLASNKLESAYNLFRK 537
+K +E A++ +K
Sbjct: 612 HKCRHLRGMERAFDQLQK 629
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 36/267 (13%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV-------- 214
V +YN ++ AL RR + +V+ DM +G P+ + S+++ + +AG V
Sbjct: 531 VTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEK 590
Query: 215 ---------------------YKAIQMLG------RLEDFGLKFDAESLNVVLWCLCQRL 247
+K + G +L+ +G K D +N +L +
Sbjct: 591 EIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNK 650
Query: 248 HVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
A + + + + + N+ TYN ++ + + G+ + E VLK I G PD ++++
Sbjct: 651 MFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYN 710
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
+I+G R G + +AI V M KG P YN +S Y + FDE + + M +
Sbjct: 711 TVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEH 770
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALE 393
NC P+ TY L+ G K+ K +A++
Sbjct: 771 NCRPSELTYKILVDGYCKAGKYEEAMD 797
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 90/170 (52%), Gaps = 1/170 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ N ++ R K F +L + + G+ P+L T + +MD ++R G+ +KA ++L
Sbjct: 635 DLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVL 694
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+++ G + D S N V+ C++ + A + + M K + ++TYN +SG++ +
Sbjct: 695 KGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGM 754
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
E V++ ++ P LT+ L++G +AG+ ++A++ +KE
Sbjct: 755 ELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAMDFVSKIKE 804
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 127 LSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVL 186
+S + V K R L EA+ + K + + +YN + + FD V+
Sbjct: 707 VSYNTVIKGFCRKGLMQEAIGVLSEMTTK--GIQPTIVTYNTFLSGYAGMELFDEANEVI 764
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
M + P T I++D + +AG+ +A+ + ++++ + FD +S+ + C+ +R
Sbjct: 765 RFMIEHNCRPSELTYKILVDGYCKAGKYEEAMDFVSKIKELDISFDDQSVKRLGSCIRER 824
Query: 247 L 247
+
Sbjct: 825 V 825
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 190/396 (47%), Gaps = 3/396 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA LF +K + DV +YN ++ G+ + + ++S+M K G D+ T +
Sbjct: 218 EARALFVR--MKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNA 275
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
+++ F + G++ KA G ++ G+ + + + + C+ V A LF M+ +
Sbjct: 276 LINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRG 335
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
++ N TY ++ G K G++ + +L E+V +G P+ +T++ +++GL + G++ +A
Sbjct: 336 MMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEAD 395
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
V M+ G + Y +I + + + + M + E ++ Y LI GL
Sbjct: 396 NVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGL 455
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K +KV +A + +M G+ P+T T+ ++ L G A+ + K G + ++
Sbjct: 456 CKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNV 515
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L+ L G + +++M+E G + + Y +I G C IG L A+ +M E
Sbjct: 516 VTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNE 575
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ KG ++VY+ L + + L+ A+ L K+
Sbjct: 576 MIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKM 611
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 179/420 (42%), Gaps = 42/420 (10%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ A DV +YN ++ + + + +M ++GV ++ T S +D+F + G
Sbjct: 261 MRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGL 320
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
V +A+++ ++ G+ + + ++ C+ + A L + M + L NV+TY +
Sbjct: 321 VQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTV 380
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
++ G K G+V E + VL + G + L ++ LI G + A+++ + MK KG
Sbjct: 381 MVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKG 440
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
D + Y +I DE M+ PN YT ++ L K+ K ++A+
Sbjct: 441 MELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAV 500
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+ ++LD G P+ T + ++ LC G A+ + K R++G ++ AY L +
Sbjct: 501 ALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTAL---I 557
Query: 453 SGFGKCGMLLDLWH--------------------------------------EMQESGYP 474
GF K G L H +M ESG
Sbjct: 558 DGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQ 617
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
D Y I+G CN+ ++ A V+ E + G P + VY+ L K +E A +L
Sbjct: 618 LDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSL 677
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 170/388 (43%), Gaps = 42/388 (10%)
Query: 190 AKEGVNPDLETLSIVMDSFIR----AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
A + P L V+D+ + G + A++ L R+ + + + N +L L +
Sbjct: 122 AALALGPRRSALPSVVDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLAR 181
Query: 246 RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
G LF+ + + NV T+NIVI K G++VE + + A G SPD +T+
Sbjct: 182 NRQGGLVRRLFDLLP---VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTY 238
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA----------------------- 342
+ LI+G G+ G +++ ++ M++ GC D YNA
Sbjct: 239 NSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKR 298
Query: 343 --VISNYISVGDF----------DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
V++N ++ F E MK + M PN TYT L+ G K+ ++ D
Sbjct: 299 QGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDD 358
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A+ + +EM+ +G+VP+ T T ++ LC G A + + G K + Y L+
Sbjct: 359 AIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIH 418
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
LDL ++M+ G D +Y +I GLC +++ A ++ + G P
Sbjct: 419 GHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRP 478
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ ++Y+ + + L + K A L KI
Sbjct: 479 NTVIYTTIMDALFKAGKESEAVALLHKI 506
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 142/315 (45%), Gaps = 1/315 (0%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H + +V +Y V+V L + NVLS M + GV + + ++
Sbjct: 368 HQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSE 427
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVI 274
+A+ +L ++++ G++ D ++W LC+ V A SL + M G L N + Y ++
Sbjct: 428 RALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIM 487
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
K G+ E +L +I+ GF P+ +T+ LI+GL +AG I +AI F+ M+E G
Sbjct: 488 DALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLD 547
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ AY A+I + +G ++ M M + YT LI G +K + DA +
Sbjct: 548 PNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFAL 607
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+M++ G+ T F+ C+ A + + G T Y L+R+
Sbjct: 608 KTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQK 667
Query: 455 FGKCGMLLDLWHEMQ 469
G L +EM+
Sbjct: 668 LGNMEEASSLQNEME 682
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 174/396 (43%), Gaps = 23/396 (5%)
Query: 154 IKHPNVAKDVKSYNVIVKALGR-------RKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
++ V + ++ N I+ L R R+ FD + P++ T +IV+D
Sbjct: 160 VRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLL-----------PVPNVFTFNIVID 208
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVL--WCLCQRLHVGAASSLFNSM-KGKV 263
+ G++ +A + R++ G D + N ++ + C L L + M K
Sbjct: 209 FLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLE--EVEQLVSEMRKSGC 266
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+V+TYN +I+ +SK G++ + E+ +G + +TFS ++ + G + +A++
Sbjct: 267 AADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMK 326
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+F M+ +G P+ Y +++ G D+ + M PN+ TYT ++ GL
Sbjct: 327 LFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLC 386
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
K KVA+A V M G+ + T+ + A+ + + + G +L ++
Sbjct: 387 KEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVS 446
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
Y L+ L K L H+M G + IY ++ L G+ AV ++ +
Sbjct: 447 LYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKI 506
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
L GF P+ + Y L + L + + A + F K++
Sbjct: 507 LDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMR 542
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 124/303 (40%), Gaps = 65/303 (21%)
Query: 104 GVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDV 163
GV +L +I N N + +LD++ ++ N+G + DV
Sbjct: 405 GVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKG-------------------MELDV 445
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
Y ++ L + + D ++L MA G+ P+ + +MD+ +AG+ +A+ +L +
Sbjct: 446 SLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHK 505
Query: 224 LEDFGLKFDAESLNVVLWC-----LCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
+ D G + NVV +C LC+ + A S FN M+ L NV Y +I G+
Sbjct: 506 ILDSGFQ-----PNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGF 560
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG----- 332
K+G + + ++ E++ +G S D + ++ LI+G + + DA + M E G
Sbjct: 561 CKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDL 620
Query: 333 ----------CG--------------------PDTNAYNAVISNYISVGDFDECMKYYKG 362
C PD YN +I Y +G+ +E
Sbjct: 621 YCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNE 680
Query: 363 MSS 365
M S
Sbjct: 681 MES 683
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 93/214 (43%), Gaps = 14/214 (6%)
Query: 334 GPDTNAYNAVISNYISV----GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
GP +A +V+ +S+ G D+ ++ + PN T ++ L ++R+
Sbjct: 127 GPRRSALPSVVDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGG 186
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
+ + D VP+ T ++ LC G A ++ + + +GC + Y L+
Sbjct: 187 ----LVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLI 242
Query: 450 RRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
G+GKCG L + L EM++SG +D Y +I G++E A E R+
Sbjct: 243 ---DGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQ 299
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
G + + +S + ++ A LF ++++
Sbjct: 300 GVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRV 333
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 181/402 (45%), Gaps = 35/402 (8%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
++L DM ++G D T + ++ R ++ +A ++L ++ D + ++++ L
Sbjct: 278 HLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGL 337
Query: 244 CQRLHVGAASSLFNSMKGK--VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
C+ + A L +++ + NV++YN +I G+SK +V + ++ E+V G PD
Sbjct: 338 CRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPD 397
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+T+S LI GL AGR +A + M K P Y++VIS G+ D +
Sbjct: 398 VVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFD 457
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M + C+PN+ Y LI GL K+ ++ DA +EM +RG P T + + LC +
Sbjct: 458 SMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWS 517
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL------------------- 462
A +Y ++ + G ++S T+ +++ L + +L
Sbjct: 518 RTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVI 577
Query: 463 -------------DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
L +M +G DG + ++ +C + A+ +EE +R G
Sbjct: 578 ESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSK 637
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYARRLW 551
PS YS L N L + K A+ + R++ I+ + + LW
Sbjct: 638 PSVGTYSTLLNALFKAGKPSEAHVVLRRL-ISHTSCFPDELW 678
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 190/447 (42%), Gaps = 77/447 (17%)
Query: 124 NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR-------- 175
N LS +VG +++ +GE+ ++FF WA + V +YN +AL R
Sbjct: 52 NGQLSQRLVGVILHMVK-NGESAMVFFGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAY 110
Query: 176 ----------------------RKFFDF-----MCNVLSDMAKEGVNPDLETLSIVMDSF 208
R +F C++ +M G+ P + T ++++
Sbjct: 111 RLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNAL 170
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM 268
++G + A++ ++ A + +++ L + + V A F MK + N
Sbjct: 171 CKSGNLELALRYFEKMSSIPC---AATWTILIDGLFRAIRVDEACYYFEEMKHTAIPNNW 227
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TY +VI+G K G+V E ERVL+E+ P ++ +I G +AG + A + + M
Sbjct: 228 TYTVVINGLVKAGKVAEAERVLQEMPV----PTLANYTSVIGGHCKAGDMGKAYHLLEDM 283
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
K KG D YN +I + + + D + + M S + P++ TY LI+GL +++++
Sbjct: 284 KRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRL 343
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
++A ++ GT+ + + C ++ +Y L
Sbjct: 344 SEARDLL------------GTLRN----------------------EDDCTPNVVSYNTL 369
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ S + L+ EM +G D Y +I GLCN G+ A +EE + K
Sbjct: 370 IDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKI 429
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLF 535
P VYS + + L + +L++A +F
Sbjct: 430 LPKVPVYSSVISGLCRAGELDAASTVF 456
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 181/449 (40%), Gaps = 70/449 (15%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ +V SYN ++ + + + +M G +PD+ T S ++ AG+ +A
Sbjct: 358 DCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEA 417
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
L + + + V+ LC+ + AAS++F+SM N+ YN +I G
Sbjct: 418 HSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYG 477
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC--- 333
K G++ + + +KE+ G SPD +T+ LI GL R R D+A +++ E+G
Sbjct: 478 LCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEIS 537
Query: 334 -----------------------------GPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
P Y VI + + E + + M
Sbjct: 538 ETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMI 597
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
+P+ T L+ + + K A+ EEM+ G PS GT ++ L L G P
Sbjct: 598 GAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPS 657
Query: 425 AAMMMYKK-----------------------------ARKVGCKL-------SLTAYKLL 448
A ++ ++ AR V +L S+ AY L
Sbjct: 658 EAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTL 717
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L+ L M+ +L EM+ + + + + +I G C +GQ + AV V+ E ++K
Sbjct: 718 LKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSE-MKKVL 776
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRK 537
PS + L ++L + + + + +L ++
Sbjct: 777 TPSAAIIKFLVDELARAEREQESKDLVKR 805
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 120/274 (43%), Gaps = 8/274 (2%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
V TYN + GQ E R+ KE + PDS+T+ LI GL G++ A ++
Sbjct: 89 TVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLY 148
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ M ++G P +++ G+ + ++Y++ MSS C T+T LI GL ++
Sbjct: 149 EEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAA---TWTILIDGLFRA 205
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+V +A FEEM I P+ T T + L G A + ++ +L Y
Sbjct: 206 IRVDEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEAERVLQEMPVP----TLANY 260
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
++ G G L +M+ GY D Y +I G C + +++ A ++EE
Sbjct: 261 TSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKS 320
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
F P Y L L + +L A +L ++
Sbjct: 321 NDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLR 354
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 201/436 (46%), Gaps = 9/436 (2%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
V L+++ G + DA S +V K + N S +A+ L A + + DV
Sbjct: 65 VLLRRMTELGCVPDAF-------SYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVV 117
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ + CN+ +M ++G PD+ T + ++++ +A V A +L ++
Sbjct: 118 TYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQM 177
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
D G+ + + ++ A+ +F M G+ L +++++N + K G+
Sbjct: 178 VDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRS 237
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E + + A+G P+ +T+ L+ G G D + F+TMK G + + +
Sbjct: 238 KEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTIL 297
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I Y G DE M M P++ TY+ LIS L + ++ADA++ F +M+ G+
Sbjct: 298 IDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGV 357
Query: 404 VPSTGTITSFLEPLCSYGP-PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P+T S ++ C++G A ++Y+ + ++ + ++ + G+
Sbjct: 358 QPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAH 417
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
++ +++ G SD ++ +I G C +G++ A V++ + G P Y+ L N
Sbjct: 418 HIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGY 477
Query: 523 LASNKLESAYNLFRKI 538
S +++ NLFR++
Sbjct: 478 FKSGRIDDGLNLFREM 493
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 173/395 (43%), Gaps = 3/395 (0%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
M+ FFN +K + + + +++ A +R D +LS+M +G++PD+ T S ++
Sbjct: 275 MMSFFN-TMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLI 333
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKV 263
+ R G++ A+ ++ G++ + + ++ C + A L M G
Sbjct: 334 SALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIP 393
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
N+ +N ++ K G+V++ + + G D + F+ LI+G G + A
Sbjct: 394 RPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFS 453
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
V D M G GPDT YN +++ Y G D+ + ++ MS +P TY ++ GL
Sbjct: 454 VLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLF 513
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
++ + A ++ EM+ G S T L+ LC A++M++K + K ++T
Sbjct: 514 RAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNIT 573
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
++ + + DL+ + +SG + Y +I L G +E A +
Sbjct: 574 TLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSM 633
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ G P + + LL ++ A N K+
Sbjct: 634 EKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKV 668
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 163/350 (46%), Gaps = 10/350 (2%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC--QRLHVGAAS 253
P + T +VM+ RA + + GRL GLK D + N VL CLC +R
Sbjct: 6 PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65
Query: 254 SLFNSMKGKVLFNVMTYNIVISGW---SKLGQVVEMERVLKEIVAEGF-SPDSLTFSFLI 309
L + + + +Y IV+ ++ Q +++ R++ + EG SPD +T++ +I
Sbjct: 66 LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAK--EEGVCSPDVVTYNTVI 123
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
G + G+I A ++ M ++G PD +N++I+ D + M
Sbjct: 124 HGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVP 183
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG-PPHAAMM 428
PN TYT +I G + +A ++F EM RG++P + SF++ LC +G AA +
Sbjct: 184 PNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEI 243
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
Y A K G + ++ Y +LL + G ++ ++ M+ G ++ ++ +I
Sbjct: 244 FYSMAAK-GHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYA 302
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G ++ A+L++ E +G P YS L + L +L A + F ++
Sbjct: 303 KRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQM 352
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 178/391 (45%), Gaps = 8/391 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVL-SDMAKEGVNPDLETLSIVMDSFI---RAGQVYKA 217
D + N ++K L K D VL M + G PD + +IV+ R+ Q
Sbjct: 42 DKTAANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDL 101
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG 276
++M+ + E D + N V+ + +G A +L++ M + + +V+T+N +I+
Sbjct: 102 LRMMAKEEGV-CSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINA 160
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K V E +L+++V G P+ +T++ +I G GR ++A ++F M +G PD
Sbjct: 161 LCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPD 220
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
++N+ + + G E + + M++ PN+ TY L+ G AD + F
Sbjct: 221 IVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFN 280
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
M GIV + T ++ G AM++ + + G + Y L+ L G
Sbjct: 281 TMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMG 340
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRLVY 515
+ +D +++M +G + +Y +I G C G L A ++ E + G P+ +
Sbjct: 341 RLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFF 400
Query: 516 SKLSNKLLASNKLESAYNLFRKIK-IARQND 545
+ + + + ++ A+++F +K I ++D
Sbjct: 401 NSIVHSICKEGRVMDAHHIFDLVKDIGERSD 431
>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 855
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 178/384 (46%), Gaps = 10/384 (2%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ A G + NV M GV PDL T +I++ +F Q KA+ +
Sbjct: 222 TYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELI 281
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK---VLFNVMTYNIVISGWSKLG 281
+ ++ D + N+++ CL + A +FNSMK K +V+T+ +I +S G
Sbjct: 282 KGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCG 341
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ E ++AEG P+ ++++ L+ G ++A++VF+ +K+ G PD +Y
Sbjct: 342 HIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYT 401
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++++ Y + + +K + N +PN+ +Y LI + + DA+E+ EM
Sbjct: 402 SLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQD 461
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
I P+ +I + L G + A G KL+ AY + G+
Sbjct: 462 KIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKA 521
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV------- 514
+DL++ M++ SD Y +I+G C + + A+ MEE + S+ V
Sbjct: 522 IDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICA 581
Query: 515 YSKLSNKLLASNKLESAYNLFRKI 538
YSK ++ L + ES +NL + +
Sbjct: 582 YSKQASALGQIIEAESTFNLMKSL 605
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 152/346 (43%), Gaps = 11/346 (3%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
IK N+ ++ SYN ++ A G + +L +M ++ ++P++ ++ ++ + R GQ
Sbjct: 423 IKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQ 482
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
K +L E G+K + + N + A L+NSM K K+ + +TY +
Sbjct: 483 KVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTV 542
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA----GRIDDAIEVFDTM 328
+ISG K+ + E ++E++ +S +I + G+I +A F+ M
Sbjct: 543 LISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQASALGQIIEAESTFNLM 602
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
K GC PD Y A++ Y + +++ ++ M + + + L+ K +
Sbjct: 603 KSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGGQP 662
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH---AAMMMYKKARKVGCKLSLTAY 445
L + + M ++ I P + TI F E + + G H A+ M K +S
Sbjct: 663 GRVLSLAQSMREKDI-PLSDTI--FFEMVSACGLLHDWKTAVDMIKYMEPSLPVISSGCL 719
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
L L L GK ++L L+ +M SG + Y ++ L + G
Sbjct: 720 NLFLNSLGKSGKIEIMLKLFFKMLASGAEVNFNTYSILLKNLLSSG 765
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 126/287 (43%), Gaps = 2/287 (0%)
Query: 255 LFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
F K + + TYN +I+ + GQ ++ +++ P T++ LI G
Sbjct: 173 FFEMQKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGS 232
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
+G +A+ V M + G GPD +N +++ + S + + + Y++ + + P+ T
Sbjct: 233 SGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTT 292
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRG--IVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
+ +I L+K ++ A+++F M ++ P T TS + G +
Sbjct: 293 HNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNM 352
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
G K ++ +Y LL + G L +++E++++G+ D Y ++ +
Sbjct: 353 MLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRK 412
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ A + + R P+ + Y+ L + ++ LE A + R+++
Sbjct: 413 PQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREME 459
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 6/239 (2%)
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
++ +I R R D A +F M++ C PD YNA+I+ + G + M M
Sbjct: 153 YNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 212
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
P+ TY LI+ S +AL V ++M D G+ P T L S
Sbjct: 213 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYS 272
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV- 483
A+ ++ + + T + +++ L + +D+++ M+E ++ +
Sbjct: 273 KALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTS 332
Query: 484 ---IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ +C G +EN L +G P+ + Y+ L A A +F +IK
Sbjct: 333 MIHLYSVC--GHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIK 389
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 1/194 (0%)
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMK-EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
F FLI L + G I+ VF MK +K T+ YN +I + D+ + M
Sbjct: 117 FPFLIRELTQRGSIEHCNLVFSWMKNQKNYCARTDIYNMMIRLHARHNRTDQARGLFFEM 176
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
C+P+ +TY LI+ ++ + A+ + ++ML I PS T + + S G
Sbjct: 177 QKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 236
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+ + KK G L + ++L + L + ++ + D + +
Sbjct: 237 KEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNII 296
Query: 484 IAGLCNIGQLENAV 497
I L + Q + AV
Sbjct: 297 IHCLVKLKQYDKAV 310
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 96/225 (42%), Gaps = 27/225 (12%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M G +PD+ T + ++D++ A + K + +E+ +K D + ++ +
Sbjct: 602 MKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGGQ 661
Query: 249 VGAASSLFNSMKGK-------VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
G SL SM+ K + F +++ ++ W +++ +++ G
Sbjct: 662 PGRVLSLAQSMREKDIPLSDTIFFEMVSACGLLHDWKTAVDMIKYMEPSLPVISSG---- 717
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+ + LG++G+I+ +++F M G + N Y+ ++ N +S G++ KY +
Sbjct: 718 --CLNLFLNSLGKSGKIEIMLKLFFKMLASGAEVNFNTYSILLKNLLSSGNW---RKYLE 772
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
D + L S+++A V + M D GI PS
Sbjct: 773 -----------DNSVAAVMCFLLSKQLAMDARVLQWMEDAGIHPS 806
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 193/437 (44%), Gaps = 36/437 (8%)
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
VL+ ++ V +V SY + ++ LG+ K FD +L+ M EG PD+ T ++++
Sbjct: 339 VLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQ 398
Query: 207 SFIRAGQVYKA-------------------IQMLGRLEDFG-----------LKFDAESL 236
AG++ A I +L + D G +K D +
Sbjct: 399 VLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYND 458
Query: 237 NVVLW-----CLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVL 290
NVV + LCQ V A +F+ MK K ++ +YN +ISG+ K + + +
Sbjct: 459 NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELF 518
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
K + G P+ T I G++G AI+ ++ MK KG PD A NAV+
Sbjct: 519 KHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKS 578
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
G + + + + P+ TYT +I K+ K +A+++F +M++ VP +
Sbjct: 579 GRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAV 638
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
S ++ L G A ++ + +++ + + Y LL L GK ++ L EM
Sbjct: 639 NSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYH 698
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
S YP + Y ++ LC G + +A+ ++ KG P Y+ + L+ +
Sbjct: 699 SNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNE 758
Query: 531 AYNLFRKIKIARQNDYA 547
A+++F ++K DYA
Sbjct: 759 AFSIFCQMKKVLIPDYA 775
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 180/383 (46%), Gaps = 9/383 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ SYN ++ L + + ++ ++ M K + PD TL ++ SF++ G + +A+ ++
Sbjct: 739 DLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHII 797
Query: 222 GRLEDF----GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
+D+ G K D S + ++ + ++ + + + + + +I
Sbjct: 798 ---KDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKH 854
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K + +E ++K+ + G S + ++ LI GL ID A +F MKE GCGPD
Sbjct: 855 LCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPD 914
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN ++ +E +K + M E TY +ISGL+KSR++ A++++
Sbjct: 915 EFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYY 974
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
++ +G P+ T L+ L G A ++ + + GCK + T Y +LL G
Sbjct: 975 NLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAG 1034
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ L+ +M + G D + Y +I LC GQL + + + L G P + Y+
Sbjct: 1035 NTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYN 1094
Query: 517 KLSNKLLASNKLESAYNLFRKIK 539
L + L S +LE A +LF +++
Sbjct: 1095 LLIDGLGKSKRLEEAVSLFNEMQ 1117
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 173/380 (45%), Gaps = 17/380 (4%)
Query: 169 IVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
I+K G K +F +A G+ D L ++ + + +A +++ + + FG
Sbjct: 820 ILKKAGIEKSIEFA----EIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFG 875
Query: 229 LKFDAESLNVVLWCLCQRLHVGAASSLFNSMK----GKVLFNVMTYNIVISGWSKLGQVV 284
+ N ++ L + A LF MK G F TYN+++ K ++
Sbjct: 876 VSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEF---TYNLLLDAMGKSMRIE 932
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
EM +V +E+ +G+ +T++ +I GL ++ R++ AI+++ + +G P Y ++
Sbjct: 933 EMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLL 992
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ G ++ + M Y C+ N Y L++G + +F++M+D+GI
Sbjct: 993 DGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGIN 1052
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML--- 461
P + T ++ LC G + + +++ ++G + L Y LL + G GK L
Sbjct: 1053 PDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLL---IDGLGKSKRLEEA 1109
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+ L++EMQ+ G + Y +I L G+ A + EE L KG+ P+ Y+ L
Sbjct: 1110 VSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRG 1169
Query: 522 LLASNKLESAYNLFRKIKIA 541
S +SAY + ++ +
Sbjct: 1170 YSVSGSTDSAYAAYGRMIVG 1189
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 194/469 (41%), Gaps = 53/469 (11%)
Query: 110 LKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVI 169
+K KG++ D + V L G++ G A +F +K V+ D +Y ++
Sbjct: 556 MKSKGIVPDVVAGNAVLFGLAKSGRL-------GMAKRVFHE--LKAMGVSPDTITYTMM 606
Query: 170 VKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGL 229
+K + FD + DM + PD+ ++ ++D+ +AG+ +A ++ +L++ L
Sbjct: 607 IKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNL 666
Query: 230 KFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMER 288
+ + N +L L + V L M N++TYN ++ K G V +
Sbjct: 667 EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALD 726
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
+L + +G PD +++ +I GL + R ++A +F MK K PD ++ +++
Sbjct: 727 MLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFV 785
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDT----YTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+G E + K Y +P T L+ G+LK + ++E E + GI
Sbjct: 786 KIGLMKEALHIIK---DYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGIT 842
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKK-------------------------------- 432
+ ++ LC A + KK
Sbjct: 843 LDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGL 902
Query: 433 ---ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+++GC Y LLL + + +L + EM GY S Y +I+GL
Sbjct: 903 FAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVK 962
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+LE A+ + + +GF P+ Y L + LL + ++E A NLF ++
Sbjct: 963 SRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 1011
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 148/320 (46%), Gaps = 3/320 (0%)
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEI 293
S N +L + VG + +F+ M+ +++ NV T+ + G G + L +
Sbjct: 217 SCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVM 276
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
G ++ T++ L+ L ++G +A+EV+ M G P Y+ ++ + D
Sbjct: 277 KEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDV 336
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
+ + + M ++ +PN+ +YT I L ++++ +A + +M + G P T T
Sbjct: 337 ETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVL 396
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
++ LC G A ++ K +K K Y LL + G ++++W+ M+ GY
Sbjct: 397 IQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGY 456
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
+ Y VI LC +G++ A+ + +E +KG P + Y+ L + L +++ A
Sbjct: 457 NDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALE 516
Query: 534 LFRKIKI--ARQNDYARRLW 551
LF+ + I + N Y L+
Sbjct: 517 LFKHMDIHGPKPNGYTHVLF 536
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 164/390 (42%), Gaps = 34/390 (8%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN ++ L D + ++M + G PD T ++++D+ G+ + +ML E
Sbjct: 883 YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM---GKSMRIEEMLKVQE 939
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE 285
+ +H S + +TYN +ISG K ++ +
Sbjct: 940 E--------------------MHRKGYESTY-----------VTYNTIISGLVKSRRLEQ 968
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+ ++++GFSP T+ L++GL +AGRI+DA +F+ M E GC + YN +++
Sbjct: 969 AIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLN 1028
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+ G+ ++ ++ M P++ +YT +I L K+ ++ D L F ++L+ G+ P
Sbjct: 1029 GHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEP 1088
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
T ++ L A+ ++ + +K G +L Y L+ L GK ++
Sbjct: 1089 DLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMY 1148
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
E+ G+ + Y +I G G ++A + G P+ S + A
Sbjct: 1149 EELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTDSSNCSSPEAV 1208
Query: 526 NKLESAYNLFRKIKIARQNDYARRLWRSKG 555
+ R A++ W SKG
Sbjct: 1209 GTVRKQITSHRSYHNAKEPTTKAWRWLSKG 1238
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 97/461 (21%), Positives = 188/461 (40%), Gaps = 71/461 (15%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F A + P VA+ S N +++ + M V M ++ V ++ T + +
Sbjct: 202 FRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLG 261
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVM 268
G + A L +++ G+ +A + N +++ L + A ++ M V+ +V
Sbjct: 262 VEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVR 321
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TY++++ + K V + +L+E+ A G P+ +++ I LG+A R D+A + M
Sbjct: 322 TYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKM 381
Query: 329 KEKGCGPDTNAYNAVIS----------------------------NYISV-------GDF 353
+ +GC PD + +I YI++ GD
Sbjct: 382 ENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDS 441
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS----TGT 409
M+ + M + N+ YT +I L + +V +ALE+F+EM +GIVP
Sbjct: 442 QSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 501
Query: 410 ITSFLEP------------LCSYGP-PHA------------------AMMMYKKARKVGC 438
I+ FL+ + +GP P+ A+ Y+ + G
Sbjct: 502 ISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGI 561
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ A +L L+ G+ GM ++HE++ G D Y +I + + AV
Sbjct: 562 VPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVK 621
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + + P L + L + L + + + A+ +F ++K
Sbjct: 622 IFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLK 662
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 156/378 (41%), Gaps = 59/378 (15%)
Query: 34 LSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVD 93
+YN LL K+M + V +E+ S++ ++ + S VK +A+D
Sbjct: 916 FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTII----SGLVKSRRLEQAID 971
Query: 94 EF-------LLPEERLRGVFLQKLKGKGVIEDA------LWNVNVDLSLDVVGKVVNRGN 140
+ P G L L G IEDA + + + ++N
Sbjct: 972 LYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHR 1031
Query: 141 LSG--EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
++G E + F + + D+KSY +I+
Sbjct: 1032 IAGNTEKVCHLFQDMVDQ-GINPDIKSYTIII---------------------------- 1062
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
D+ +AGQ+ + +L + GL+ D + N+++ L + + A SLFN
Sbjct: 1063 -------DTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNE 1115
Query: 259 MKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
M+ K ++ N+ TYN +I K G+ E ++ +E++ +G+ P+ T++ LI G +G
Sbjct: 1116 MQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGS 1175
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC-EPNMDTYT 376
D A + M GC P+++ ++ S+ +VG + + ++ S +N EP +
Sbjct: 1176 TDSAYAAYGRMIVGGCLPNSSTDSSNCSSPEAVGTVRKQITSHR--SYHNAKEPTTKAWR 1233
Query: 377 RLISGLLKSRKVADALEV 394
L G L+ +A ++
Sbjct: 1234 WLSKGCLRRAAAGNAQQI 1251
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 183/374 (48%), Gaps = 3/374 (0%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A DV +Y ++V+AL + D ++L M G+ P+L T + ++ + ++ +A++
Sbjct: 364 APDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALE 423
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
+ +E G+ A S + + + A F MK + ++ ++ N + +
Sbjct: 424 LFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLA 483
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
++G++ E + + +I G SPDS+T++ +++ +AG+ID A ++ M +GC PD
Sbjct: 484 EMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDII 543
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
N++I G DE + + + P + TY LI+GL K K+ AL++F M
Sbjct: 544 VVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSM 603
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+ G P+T T + L+ LC A+ M+ + + C + Y ++ L G+
Sbjct: 604 KESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRA 663
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV-LVMEESLRKGFCPSRLVYSK 517
G +H+M++ P +Y ++ G+ G++E+A+ +VME + G S V+ +
Sbjct: 664 GYAFWFYHQMKKFLSPDHVTLYT-LLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGE 722
Query: 518 LSNKLLASNKLESA 531
L +L ++E A
Sbjct: 723 LMECILIEAEIEEA 736
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 171/376 (45%), Gaps = 1/376 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SYN ++ L + F V M EG+ P ++T S +M + R + +L +
Sbjct: 194 SYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEM 253
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
E GL+ + + + + L + + A + +M+ + +V+TY ++I G++
Sbjct: 254 ETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKL 313
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ + + ++ A PD +T+ L+ G G ++ + M+ G PD Y +
Sbjct: 314 DKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTIL 373
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ G D+ M PN+ TY LISGLL R++ +ALE+F M G+
Sbjct: 374 VEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGV 433
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ + F++ G P A+ ++K +K G S+ A L L+ G+ D
Sbjct: 434 APTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKD 493
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+++++ G D Y ++ GQ++ A ++ E L +G P +V + L + L
Sbjct: 494 IFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLY 553
Query: 524 ASNKLESAYNLFRKIK 539
+ +++ A+ +F ++K
Sbjct: 554 KAGRVDEAWQMFGRLK 569
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 191/448 (42%), Gaps = 71/448 (15%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+K+Y+ ++ ALGRR+ + ++L +M G+ P++ T +I + RAG++ A +L
Sbjct: 227 MKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILK 286
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLG 281
+ED G D + V++ LC + A L+ M+ +++TY ++S + G
Sbjct: 287 TMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYG 346
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG------------------------- 316
+ ++R E+ A+G++PD +T++ L+E L ++G
Sbjct: 347 DLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYN 406
Query: 317 ----------RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS- 365
R+D+A+E+F+ M+ G P +Y I Y +GD ++ + ++ M
Sbjct: 407 TLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKR 466
Query: 366 --------------------------------YNC--EPNMDTYTRLISGLLKSRKVADA 391
+NC P+ TY ++ K+ ++ A
Sbjct: 467 GIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKA 526
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
++ EML G P + S ++ L G A M+ + + + ++ Y +L+
Sbjct: 527 TKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITG 586
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L GK LDL+ M+ESG P + + ++ LC ++ A+ + P
Sbjct: 587 LGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPD 646
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKIK 539
L Y+ + L+ + A+ + ++K
Sbjct: 647 VLTYNTIIYGLIKEGRAGYAFWFYHQMK 674
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 160/352 (45%), Gaps = 7/352 (1%)
Query: 171 KALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLK 230
KAL +K FD L G +P E+ + +MD + A+++ +++ G
Sbjct: 767 KALDAKKLFDKFTKSL------GTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCC 820
Query: 231 FDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERV 289
+ + N++L + + L+N M + N++T+NI+IS K + + +
Sbjct: 821 PNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDL 880
Query: 290 LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYIS 349
EI++ FSP T+ LI GL +AGR ++A+++F+ M + C P+ YN +I+ +
Sbjct: 881 YYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGK 940
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
G+ + +K M P++ +YT L+ L + +V DA+ FEE+ G+ P T +
Sbjct: 941 AGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVS 1000
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
+ L A+ ++ + + G L Y L+ G ++ E+Q
Sbjct: 1001 YNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQ 1060
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
G + Y +I G G + A V ++ + G P+ +++L NK
Sbjct: 1061 FMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPNK 1112
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 180/390 (46%), Gaps = 14/390 (3%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N + DV +YN I+ L + + M K+ ++PD TL ++ ++ G+V A
Sbjct: 642 NCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGVVKDGRVEDA 700
Query: 218 IQMLGR-LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV--- 273
I+++ + GL+ + ++ C+ + A S + + N++
Sbjct: 701 IKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSI--CQDDNLILPL 758
Query: 274 ISGWSKLGQVVEMERVLKEIVAE-GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
I K + ++ +++ + G P +++ L++GL + A+++F MK G
Sbjct: 759 IRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAG 818
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
C P+ YN ++ + DE + Y M C+PN+ T+ +IS L+KS + AL
Sbjct: 819 CCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKAL 878
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+++ E++ P+ T + L G AM ++++ CK + Y +L +
Sbjct: 879 DLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNIL---I 935
Query: 453 SGFGKCG---MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
+GFGK G + DL+ M + G D + Y ++ L G++++AV EE G
Sbjct: 936 NGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLD 995
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P + Y+ + N L S +LE A +LF ++K
Sbjct: 996 PDTVSYNLMINGLGKSRRLEEALSLFSEMK 1025
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 134/291 (46%), Gaps = 1/291 (0%)
Query: 251 AASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
AA LF MK N+ TYN+++ K ++ E+ + E++ G P+ +T + +I
Sbjct: 806 AALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIII 865
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
L ++ I+ A++++ + P Y +I + G +E MK ++ M Y C+
Sbjct: 866 SALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCK 925
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
PN Y LI+G K+ V A ++F+ M+ GI P + T +E L G A+
Sbjct: 926 PNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHY 985
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+++ + G +Y L++ L + L L+ EM+ G + Y +I N
Sbjct: 986 FEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGN 1045
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
G ++ A + EE G P+ Y+ L S + A+++F+K+ I
Sbjct: 1046 AGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMI 1096
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 108/214 (50%), Gaps = 10/214 (4%)
Query: 131 VVGKVVNRGNLSGEAMVLF---FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLS 187
++G ++ G S EAM +F ++ K PN A YN+++ G+ + C++
Sbjct: 899 LIGGLLKAGR-SEEAMKIFEEMPDYQCK-PNCA----IYNILINGFGKAGNVNIACDLFK 952
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
M KEG+ PDL++ +I+++ G+V A+ L+ GL D S N+++ L +
Sbjct: 953 RMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSR 1012
Query: 248 HVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
+ A SLF+ MK + + + TYN +I + G V + ++ +E+ G P+ T++
Sbjct: 1013 RLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYN 1072
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
LI G ++G D A VF M GC P+ +
Sbjct: 1073 ALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTF 1106
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 119/294 (40%), Gaps = 35/294 (11%)
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+V +M V + + + + T+ + + L G I A M++ G + +Y
Sbjct: 136 GRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSY 195
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR-------------- 386
N +I + G E +K YK M S +P+M TY+ L+ L + R
Sbjct: 196 NGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMET 255
Query: 387 ---------------------KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
++ DA + + M D G P T T ++ LC+ G
Sbjct: 256 LGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDK 315
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A +Y K R K L Y L+ + +G + W EM+ GY D Y ++
Sbjct: 316 AKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVE 375
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
LC G+++ A +++ +G P+ Y+ L + LL +L+ A LF ++
Sbjct: 376 ALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNME 429
>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Brachypodium distachyon]
Length = 726
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 186/421 (44%), Gaps = 38/421 (9%)
Query: 154 IKHPNVAKDVKSYNVIVKAL--GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
+K + +V SY+V++ A G R + +LS+M +GV P+ T + R
Sbjct: 200 MKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRT 259
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTY 270
QV A L L G + N V+ C+ V A +F++MK G ++ + +Y
Sbjct: 260 RQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSY 319
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
+I++ G K G V+ +L E+ G +P +++S L+ GL RAG+++ A E+F ++E
Sbjct: 320 SILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEE 379
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
+G D Y+ +++ + + + M +N P+ YT LI + R + D
Sbjct: 380 QGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTD 439
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
AL VFE MLD G+ P+ T T ++ A + K R+ G +L Y++++
Sbjct: 440 ALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIIN 499
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA------------------------- 485
L K + ++ +M + GY D +Y +I
Sbjct: 500 GLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKP 559
Query: 486 ----------GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
GLC+ +L V + + + +G P R++Y+ L + +++A +F
Sbjct: 560 NVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIF 619
Query: 536 R 536
R
Sbjct: 620 R 620
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 167/367 (45%), Gaps = 1/367 (0%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
A+K + D SY+++V L ++ ++L +MA+ G+ P L + S ++ RAG
Sbjct: 306 AMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAG 365
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYN 271
+V A ++ RLE+ G K D +++L CQ L++ L+N M + + Y
Sbjct: 366 KVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYT 425
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I + + + + V + ++ G SP+ +T + L++G G+ ID+A +++
Sbjct: 426 SLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQF 485
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G P+ Y +I+ V D + M P+ Y+ +I +K+ K+ +A
Sbjct: 486 GIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEA 545
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+F +MLD G P+ T TS + LC + ++K G Y L+
Sbjct: 546 FRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVC 605
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L+++ M + G +D +Y +I G + ++ A +MEE KG PS
Sbjct: 606 YCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPS 665
Query: 512 RLVYSKL 518
+ Y+ L
Sbjct: 666 VVTYTNL 672
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 138/306 (45%), Gaps = 3/306 (0%)
Query: 237 NVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV--VEMERVLKEI 293
N +L CL +R + A SLF+ MK NV +Y++++S ++ ++ E +L E+
Sbjct: 178 NFLLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEM 237
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+G P++ T+ + GL R ++ A + ++G +T +NAVI + G
Sbjct: 238 EMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQV 297
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
E ++ + M P+ +Y+ L+ GL K V ++ EM GI P+ + +S
Sbjct: 298 QEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSL 357
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
L LC G A ++++ + G K Y ++L ++ DLW++M +
Sbjct: 358 LHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNF 417
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
D Y +I C L +A+ V E L G P+ + + L + ++ A+
Sbjct: 418 VPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFL 477
Query: 534 LFRKIK 539
K++
Sbjct: 478 FLHKVR 483
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 98/225 (43%), Gaps = 1/225 (0%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
F ++ + ++ Y VI+ L + D + + +DM K G PD SI++DS
Sbjct: 476 FLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDS 535
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-N 266
F++A ++ +A ++ ++ D G K + + ++ LC + +LF M + L +
Sbjct: 536 FVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPD 595
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
+ Y +I + K + + + + G S D+ ++ LI G + +D A + +
Sbjct: 596 RILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLME 655
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
M KG P Y +I Y +GD + Y M P+
Sbjct: 656 EMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPD 700
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 172/379 (45%), Gaps = 11/379 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN+++ L +R+ N+ M + GV P + T ++ + G + +A+++
Sbjct: 385 DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLY 444
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAAS-----SLFNSMKGK-VLFNVMTYNIVIS 275
+ G + NVV + + H+ A+ +L MK V N TYN +I+
Sbjct: 445 TEMPGKGF-----TPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLIN 499
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G +G+V E+ +LK EGF P ++T++ +I G +AG + A V+ M KG P
Sbjct: 500 GLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPP 559
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+ Y + I Y D +K + P++ Y LI G + ++ AL+V
Sbjct: 560 NIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVL 619
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
ML G++P+ SF+ + A+ Y+K K G L Y L+ S
Sbjct: 620 VLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKD 679
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
G L L+ EM G D + + GLC G +++A +++E R P+ L+Y
Sbjct: 680 GNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMY 739
Query: 516 SKLSNKLLASNKLESAYNL 534
+ L N L + KL+ A+ L
Sbjct: 740 NMLINGYLRNGKLQEAFRL 758
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 160/336 (47%), Gaps = 6/336 (1%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV +Y ++K + FD +L++M + GV+ + T + +++ G+V +
Sbjct: 454 PNVV----TYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCE 509
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVIS 275
+ML R E G A + N ++ + +G+A +++ M K + N++TY I
Sbjct: 510 VGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFID 569
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G+ K ++L ++ +G PD ++ LI G + G + A++V M + G P
Sbjct: 570 GYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLP 629
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+ + YN+ I+ Y ++ +E +++Y+ M + + TYT LI G K V AL+++
Sbjct: 630 NISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLY 689
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
EM+ +G +P T T+ LC G A + + ++ + ++ Y +L+
Sbjct: 690 SEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRN 749
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
GK L EM E D Y+ ++ G+ ++G
Sbjct: 750 GKLQEAFRLHDEMLERKIMPDDTTYD-ILVGMKSLG 784
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 174/397 (43%), Gaps = 4/397 (1%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F ++ V DV +Y V+++ + + M G+ P ++V+
Sbjct: 304 IFEETLRDGLVPTDV-TYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGL 362
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNV 267
+ A+ + + D G+ DA + N+++ LCQR + A +L+ M + V +
Sbjct: 363 LNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYI 421
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TY+ ++ + G + E ++ E+ +GF+P+ +T++ L++G D A +
Sbjct: 422 VTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAE 481
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
MK+ G + YN +I+ VG E + K + P TY +I+G +K+
Sbjct: 482 MKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGM 541
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ A V+++M +GI P+ T TSF++ C A+ M R G + + AY
Sbjct: 542 MGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNS 601
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L+ G L + M + G + +Y I G N+ +E A+ E+ +++G
Sbjct: 602 LIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEG 661
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
Y+ L + + A L+ ++ +A+ N
Sbjct: 662 IDLDTATYTTLIDGFSKDGNVTFALKLYSEM-VAKGN 697
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 169/391 (43%), Gaps = 45/391 (11%)
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
+M +G D +VM + + G A+++ + ++ D +V + LC+
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226
Query: 248 HVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA---------- 295
A + M+ G V ++ T+N V+ K G++ E + E++A
Sbjct: 227 DANRALLVLRKMQDAGFVPWD-FTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLA 285
Query: 296 -------------------------EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
+G P +T++ LI G G + A E+ M++
Sbjct: 286 TTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRD 345
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
G P TN +N VI ++ + + + +K M+ P+ TY LI L + RK+ +
Sbjct: 346 HGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIRE 404
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
AL ++E+M + G+ P T S L C G A+ +Y + G ++ Y L++
Sbjct: 405 ALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMK 464
Query: 451 ---RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
+ F K LL EM+++G + Y +I GLC +G++ +++ +G
Sbjct: 465 GHINKAAFDKAYALL---AEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEG 521
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
F P+ + Y+ + N + + + SA+ +++++
Sbjct: 522 FVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 140/351 (39%), Gaps = 35/351 (9%)
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQ 282
+E G+ DA+S +L + A +L M+GK + +++V+ K G
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ R+ E+ A PD S I L + + A+ V M++ G P +N+
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
V+ + G +E + + + + ++ T L+ G R+V AL++FEE L G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL---------- 452
+VP+ T T + G P A + ++ R G S + ++++ L
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372
Query: 453 --------SGFG----------------KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
SG K L+LW +M E+G Y ++ C
Sbjct: 373 SLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC 432
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G ++ AV + E KGF P+ + Y+ L + + AY L ++K
Sbjct: 433 VNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMK 483
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 183/400 (45%), Gaps = 13/400 (3%)
Query: 128 SLDVVGKVVNRGNLSGEAMVLFFNWAIKHP---NVAKDVKSYNVIVKALGRRKFFDFMCN 184
+LDV+GK E +L F W + + +V D K+ ++++ LGR +
Sbjct: 167 ALDVLGK--------SERAILLFEWVVSNSVSGDVKLDSKAVELMIRILGRESKYSIALK 218
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+L + + + D+ + ++ ++ R G+ +AI M R++D GL + NV+L
Sbjct: 219 LLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYG 278
Query: 245 QRLHV-GAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
+ L + M+ + L F+ T + VIS + G + E + E+ + G+ P +
Sbjct: 279 KMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGT 338
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+T++ L++ G+AG +A+ + M++ C D+ YN +++ Y+ G ++E
Sbjct: 339 VTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDT 398
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M+ PN TYT +I+ ++ K AL++F +M G VP+ T S L L
Sbjct: 399 MTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSR 458
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
+ + R GC + + LL GK + ++ EM+ G+ + +
Sbjct: 459 SEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNT 518
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+I+ G +A + +E ++ GF P Y+ L N L
Sbjct: 519 LISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNAL 558
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 160/395 (40%), Gaps = 36/395 (9%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N D +YN +V A R F++ V+ M ++GV P+ T + V++++ RAG+ KA
Sbjct: 368 NCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKA 427
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISG 276
+Q+ +++ G + + N +L L ++ + + M+ N +T+N +++
Sbjct: 428 LQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAM 487
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
G+ + V +E+ GF P TF+ LI GR G DA +++D M + G P
Sbjct: 488 CGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPC 547
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT-------------------- 376
YNA+++ GD+ M + +PN +++
Sbjct: 548 ATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGK 607
Query: 377 ---------------RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
LI K R V FEE++ G P S L
Sbjct: 608 DIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNN 667
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
A M R+ G + L Y L+ + G+C ++ + +SG D Y
Sbjct: 668 MYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYN 727
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+I G C G ++ A+ VM E +G CP Y+
Sbjct: 728 TIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYN 762
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 164/360 (45%), Gaps = 8/360 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY-KAIQM 220
DV++ I+ A R + + M G++P L T ++++D + + G+ + K + +
Sbjct: 231 DVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDL 290
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSK 279
L + + GL+FD + + V+ + + A F +K +TYN ++ + K
Sbjct: 291 LDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGK 350
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G E +LKE+ + DS+T++ L+ RAG ++ V DTM KG P+
Sbjct: 351 AGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVT 410
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y VI+ Y G + ++ + M C PN+ TY +++ L K + + +++ +M
Sbjct: 411 YTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMR 470
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
G P+ T + L G ++++ + G + + L +S +G+CG
Sbjct: 471 INGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTL---ISAYGRCG 527
Query: 460 MLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
LD ++ EM ++G+ Y ++ L G + A V+ + KGF P+ +S
Sbjct: 528 SELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFS 587
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 122/266 (45%), Gaps = 38/266 (14%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR- 223
+YN ++ AL RR + +VL DM +G P+ + S+++ + + G V + ++ +G+
Sbjct: 550 TYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNV-RGLERIGKD 608
Query: 224 -----------------LEDF------------------GLKFDAESLNVVLWCLCQRLH 248
L +F G K D N +L +
Sbjct: 609 IYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNM 668
Query: 249 VGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
A + + ++ L +++TYN +++ +++ G+ + E +LK ++ G SPD ++++
Sbjct: 669 YERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNT 728
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
+I+G R G + +AI V M +G P YN +S Y G F E + M N
Sbjct: 729 IIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKN 788
Query: 368 CEPNMDTYTRLISGLLKSRKVADALE 393
C+PN TY ++ G K+RK DA++
Sbjct: 789 CKPNELTYKIIVDGYCKARKYQDAMD 814
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 118/252 (46%), Gaps = 3/252 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++N ++ A GR + +M K G P T + ++++ R G A +L +
Sbjct: 515 TFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDM 574
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFN--VMTYNIVISGWSKLGQ 282
+ G K + S +++L C + +V + + +F V+ ++++ + K
Sbjct: 575 RNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANF-KCRA 633
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V MER +E++ G+ PD + F+ ++ + + A ++ D ++E G PD YN+
Sbjct: 634 VRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNS 693
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+++ Y G+ + + KG+ P++ +Y +I G + + +A+ V EM RG
Sbjct: 694 LMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRG 753
Query: 403 IVPSTGTITSFL 414
I P T +F+
Sbjct: 754 ICPCIFTYNTFV 765
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/349 (19%), Positives = 143/349 (40%), Gaps = 22/349 (6%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++N ++ G + F+ +V +M G P +T + ++ ++ R G A +M +
Sbjct: 480 TWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEM 539
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQV 283
G A + N +L L +R AA S+ M+ K N ++++++ ++K G V
Sbjct: 540 MKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNV 599
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ER+ K+I P + LI + + F+ + + G PD +N++
Sbjct: 600 RGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSM 659
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+S + ++ K + +P++ TY L++ + + A E+ + ++ G
Sbjct: 660 LSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGE 719
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P + + ++ C G A+ + + G + Y +SG+ GM +
Sbjct: 720 SPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTF---VSGYAGRGMFAE 776
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
+ E+ Y+I C +L ++V G+C +R
Sbjct: 777 V------------DEVISYMIQKNCKPNELTYKIIV------DGYCKAR 807
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 87/200 (43%), Gaps = 1/200 (0%)
Query: 182 MCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLW 241
M ++ K G PD+ + ++ F + +A +ML + + GL+ D + N ++
Sbjct: 637 MERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMN 696
Query: 242 CLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
+R A + + K ++++YN +I G+ + G + E RV+ E+ G P
Sbjct: 697 MYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICP 756
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
T++ + G G + EV M +K C P+ Y ++ Y + + M +
Sbjct: 757 CIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDAMDFI 816
Query: 361 KGMSSYNCEPNMDTYTRLIS 380
G+ + + + + RL S
Sbjct: 817 FGIKNIDDSFDNHSTQRLAS 836
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 129/296 (43%), Gaps = 15/296 (5%)
Query: 253 SSLFNSMKGKVL-FNVMTYNIVISGWSKLGQ----VVEMERVLKEIVAEGFSPDSLTFSF 307
++LF+S+K ++L ++++ ++ LG+ ++ E V+ V+ DS
Sbjct: 146 NALFDSVKSELLEVDIVS---LLKALDVLGKSERAILLFEWVVSNSVSGDVKLDSKAVEL 202
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
+I LGR + A+++ D + D A ++ Y G + + + ++ M
Sbjct: 203 MIRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCG 262
Query: 368 CEPNMDTYTRLISGLLKSRKVADA-LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
P++ TY ++ K + D L++ +EM + G+ T ++ + G + A
Sbjct: 263 LSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEA 322
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYV 483
+ + + G + Y LL+ FGK G+ L++ EM+++ D Y +
Sbjct: 323 KEFFVELKSSGYEPGTVTYNALLQV---FGKAGIYSEALNILKEMEDNNCTLDSVTYNEL 379
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+A G E V++ RKG P+ + Y+ + N + K A LF ++K
Sbjct: 380 VAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMK 435
>gi|125555457|gb|EAZ01063.1| hypothetical protein OsI_23091 [Oryza sativa Indica Group]
Length = 552
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 186/390 (47%), Gaps = 11/390 (2%)
Query: 159 VAKDVKSYNVIVKAL-------GRRKFFDFMCNVLSDMAKE-GVNPDLETLSIVMDSFIR 210
+A + S+N+++K + R++ D +L ++ + PD T S V+ +
Sbjct: 72 LAPTLLSFNLLLKCVCSSLVPRDPRRYLDVALRILHEIIPGWDLAPDKFTYSTVVSALAD 131
Query: 211 AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMT 269
AG+V A+ ++ + G+ AE+ N VL + + V A+ LF M+ K + T
Sbjct: 132 AGRVDDAVALVHEMVADGV-VAAEAFNPVLRAMLRAGDVKGAAKLFEFMQLKGCVPTAAT 190
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
YN+++ G G+ V++ + EG P +T+ +++GL R GR+ DA +V + M+
Sbjct: 191 YNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEME 250
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
G + Y+ VI+ + G+ D +K ++ M + PN+ Y+ +I GL K+
Sbjct: 251 RNGLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMT 310
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
+A +F EM+D P+ T S ++ G A+ ++++ GC + +Y +L+
Sbjct: 311 EAELLFREMIDSKCAPNIITYGSMIQGYFKIGDTSRALSVWEEMIGAGCMPNAVSYSILI 370
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
L G+ + +W M + G D Y +I GLC G ++ + + + L G
Sbjct: 371 NGLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHA 430
Query: 510 -PSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P + Y+ L + LL + L A +L ++
Sbjct: 431 DPDVISYNVLLDGLLLAKDLPRAMDLLNRM 460
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 166/366 (45%), Gaps = 49/366 (13%)
Query: 96 LLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGK---------VVNRGNLSGEAM 146
L P++ + L G ++DA+ V+ ++ VV ++ G++ G A
Sbjct: 115 LAPDKFTYSTVVSALADAGRVDDAVALVHEMVADGVVAAEAFNPVLRAMLRAGDVKGAAK 174
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
+ F ++ +YNV+V L V+ M +EGV P + T V+D
Sbjct: 175 LFEF---MQLKGCVPTAATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVD 231
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------- 259
+R G+V A ++ +E GL + + V+ C+ + A ++ +M
Sbjct: 232 GLVRCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRP 291
Query: 260 -------------------KGKVLF----------NVMTYNIVISGWSKLGQVVEMERVL 290
+ ++LF N++TY +I G+ K+G V
Sbjct: 292 NVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNIITYGSMIQGYFKIGDTSRALSVW 351
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
+E++ G P+++++S LI GL GR+ DA+ V+ M ++GC PDT AY ++I
Sbjct: 352 EEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVS 411
Query: 351 GDFDECMK-YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
G D ++ +Y ++S + +P++ +Y L+ GLL ++ + A+++ MLD+G P T T
Sbjct: 412 GMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVT 471
Query: 410 ITSFLE 415
FL
Sbjct: 472 CNIFLR 477
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
+M P++ T ++ + + G +A+ + + G +A S ++++ LC
Sbjct: 318 EMIDSKCAPNIITYGSMIQGYFKIGDTSRALSVWEEMIGAGCMPNAVSYSILINGLCNVG 377
Query: 248 HVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS-PDSLTF 305
+ A ++ M + + + Y +I G G V R+ +++A G + PD +++
Sbjct: 378 RLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVISY 437
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
+ L++GL A + A+++ + M ++GC PDT N + +
Sbjct: 438 NVLLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTCNIFLREF 479
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Query: 124 NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMC 183
NV L ++G + N G ++ EA +LF + A ++ +Y +++ +
Sbjct: 292 NVVLYSAMIGGLANFGKMT-EAELLFRE--MIDSKCAPNIITYGSMIQGYFKIGDTSRAL 348
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
+V +M G P+ + SI+++ G++ A+ + + D G D + ++ L
Sbjct: 349 SVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGL 408
Query: 244 CQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
C V LF M G +V++YN+++ G + +L ++ +G PD
Sbjct: 409 CVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQGCDPD 468
Query: 302 SLTFSFLIEGLG---RAGR 317
++T + + G R GR
Sbjct: 469 TVTCNIFLREFGAGERKGR 487
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 169/365 (46%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ +V +VK++N+++ L + D + M + DL T S ++ AG
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
V KA + L++ D + N +L C+ + + L+ M+ K N+++YNI+
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNIL 365
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
I G + G++ E + + + A+G++ D T+ I GL G ++ A+ V ++ G
Sbjct: 366 IKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGG 425
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
D AY ++I +E K MS + E N LI GL++ ++ +A
Sbjct: 426 HLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASF 485
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
EM G P+ + + LC G A K+ + G K L Y +LL L
Sbjct: 486 FLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLC 545
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
K + L+LWH+ +SG +D ++ +I GLC++G+L++A+ VM + + +
Sbjct: 546 RDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLV 605
Query: 514 VYSKL 518
Y+ L
Sbjct: 606 TYNTL 610
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 185/434 (42%), Gaps = 43/434 (9%)
Query: 145 AMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIV 204
A F+ A +HP A Y+ I++ L + + + ++ + + D + V
Sbjct: 25 AAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSV 84
Query: 205 MDSFIRAGQVYKAIQMLGRL-EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GK 262
+ ++ + +A+ + R+ E FG + S N +L + SLF +
Sbjct: 85 IKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAG 144
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
V N+ TYN++I K + + L + EGF PD ++S +I L +AG++DDA+
Sbjct: 145 VAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDAL 204
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY-KGMSSYNCEPNMDTYTRLISG 381
E+FD M E+G PD YN +I ++ D M+ + + + + PN+ T+ +ISG
Sbjct: 205 ELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISG 264
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L K +V D L+++E M T +S + LC G A ++ + + +
Sbjct: 265 LSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASID 324
Query: 442 LTAYKLLLRRLSGFGKCGML---LDLWHEMQE---------------------------- 470
+ Y + L GF +CG + L+LW M+
Sbjct: 325 VVTYNTM---LGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMI 381
Query: 471 ------SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
GY +D Y I GLC G + A+ VM+E G Y+ + + L
Sbjct: 382 WRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCK 441
Query: 525 SNKLESAYNLFRKI 538
+LE A NL +++
Sbjct: 442 KKRLEEASNLVKEM 455
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 192/431 (44%), Gaps = 42/431 (9%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
E++ +F A VA ++++YNV++K ++K F+ L M KEG PD+ + S
Sbjct: 134 ESLFAYFETA----GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYST 189
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KG 261
V++ +AG++ A+++ + + G+ D N+++ + A L++ +
Sbjct: 190 VINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDS 249
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
V NV T+NI+ISG SK G+V + ++ + + D T+S LI GL AG +D A
Sbjct: 250 SVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKA 309
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
VF+ + E+ D YN ++ + G E ++ ++ M N N+ +Y LI G
Sbjct: 310 ESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKG 368
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
LL++ K+ +A ++ M +G T F+ LC G + A+ + ++ G L
Sbjct: 369 LLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLD 428
Query: 442 LTAYKL----------------LLRRLSGFGK------CGMLLD-------------LWH 466
+ AY L++ +S G C L+
Sbjct: 429 VYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLR 488
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
EM ++G Y +I GLC G+ A ++E L G+ P YS L L
Sbjct: 489 EMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDR 548
Query: 527 KLESAYNLFRK 537
K++ A L+ +
Sbjct: 549 KIDLALELWHQ 559
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 138/335 (41%), Gaps = 36/335 (10%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
W I + ++ SYN+++K L D + M +G D T I +
Sbjct: 348 WRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK----------- 260
G V KA+ ++ +E G D + ++ CLC++ + AS+L M
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467
Query: 261 -------------GKVLF------------NVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
G+ F V++YNI+I G K G+ E +KE++
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
G+ PD T+S L+ GL R +ID A+E++ + G D +N +I SVG D+
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
M M NC N+ TY L+ G K A ++ M G+ P + + ++
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
LC AM + AR G ++ + +L+R
Sbjct: 648 GLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVR 682
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 189/420 (45%), Gaps = 39/420 (9%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F +W K DV SY+ ++ L + D + +M++ GV PD+ +I++D F
Sbjct: 171 FLDWMWKE-GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGF 229
Query: 209 IRAGQVYKAIQMLGRL-EDFGLKFDAESLNVVL---------------W----------- 241
++ A+++ RL ED + + ++ N+++ W
Sbjct: 230 LKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKD 289
Query: 242 ---------CLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLK 291
LC +V A S+FN + + K +V+TYN ++ G+ + G++ E + +
Sbjct: 290 LYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR 349
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
I+ S + ++++ LI+GL G+ID+A ++ M KG D Y I G
Sbjct: 350 -IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNG 408
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
++ + + + S ++ Y +I L K +++ +A + +EM G+ ++
Sbjct: 409 YVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCN 468
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
+ + L A ++ K GC+ ++ +Y +L+ L GK G EM E+
Sbjct: 469 ALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN 528
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G+ D + Y ++ GLC +++ A+ + + L+ G ++++ L + L + KL+ A
Sbjct: 529 GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDA 588
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 102/212 (48%), Gaps = 7/212 (3%)
Query: 173 LGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
LG FF L +M K G P + + +I++ +AG+ +A + + + G K D
Sbjct: 480 LGEASFF------LREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPD 533
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNS-MKGKVLFNVMTYNIVISGWSKLGQVVEMERVLK 291
++ +++L LC+ + A L++ ++ + +VM +NI+I G +G++ + V+
Sbjct: 534 LKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMA 593
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
+ + + +T++ L+EG + G + A ++ M + G PD +YN ++
Sbjct: 594 NMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCR 653
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
M+++ ++ P + T+ L+ ++
Sbjct: 654 GVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 194/437 (44%), Gaps = 36/437 (8%)
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
VL+ ++ V +V SY + ++ LG+ + FD +L++M EG PD+ T ++++
Sbjct: 293 VLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQ 352
Query: 207 SFIRAGQVYKA-------------------IQMLGRLEDFG-----------LKFDAESL 236
AG++ A I +L + D G +K D +
Sbjct: 353 VLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYND 412
Query: 237 NVVLW-----CLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVL 290
NVV + LCQ V A +F+ MK K ++ +YN +ISG+ K + + +
Sbjct: 413 NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELF 472
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
K + G P+ T I G++G AI+ ++ MK KG PD A NAV+
Sbjct: 473 KYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKS 532
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
G + + + + P+ TYT +I K+ K +A+++F +M++ VP +
Sbjct: 533 GRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVV 592
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
S ++ L G A ++ + +++ + + Y LL L GK ++ L EM
Sbjct: 593 NSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYH 652
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
S YP + Y ++ LC G + +A+ ++ KG P Y+ + L+ +
Sbjct: 653 SNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNE 712
Query: 531 AYNLFRKIKIARQNDYA 547
A+++F ++K DYA
Sbjct: 713 AFSIFCQMKKVLIPDYA 729
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 180/382 (47%), Gaps = 7/382 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ SYN ++ L + + ++ ++ M K + PD TL ++ SF++ G + +A+ ++
Sbjct: 693 DLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHII 751
Query: 222 GR-LEDFGLKFDAESLNVVLWCLCQRLHVGAASSL-FNSM--KGKVLFNVMTYNIVISGW 277
G K D S + ++ + ++ G S+ F + + + +I
Sbjct: 752 KEYFLQPGSKTDRSSCHSLMEGILKK--AGTEKSIEFAEIIASSGITLDDFFLCPLIKHL 809
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K + +E ++K+ + G S + +++ LI GL ID A +F MKE GCGPD
Sbjct: 810 CKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDE 869
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN ++ +E +K + M E TY +ISGL+KSR++ A++++
Sbjct: 870 FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 929
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
++ +G P+ T L+ L G A ++ + + GCK + T Y +LL G
Sbjct: 930 LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGN 989
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+ L+ +M + G D + Y +I LC GQL + + + L G P + Y+
Sbjct: 990 TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNL 1049
Query: 518 LSNKLLASNKLESAYNLFRKIK 539
L + L S +LE A +LF +++
Sbjct: 1050 LIDGLGKSKRLEEAVSLFNEMQ 1071
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 172/377 (45%), Gaps = 11/377 (2%)
Query: 169 IVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
I+K G K +F +A G+ D L ++ + + +A +++ + + FG
Sbjct: 774 ILKKAGTEKSIEFA----EIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFG 829
Query: 229 LKFDAESLNVVLWCLCQRLHVGAASSLFNSMK----GKVLFNVMTYNIVISGWSKLGQVV 284
+ S N ++ L + A LF MK G F TYN+++ K ++
Sbjct: 830 VSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEF---TYNLLLDAMGKSMRIE 886
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
EM +V +E+ +G+ +T++ +I GL ++ R++ AI+++ + +G P Y ++
Sbjct: 887 EMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLL 946
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ G ++ + M Y C+ N Y L++G + +F++M+D+GI
Sbjct: 947 DGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGIN 1006
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P + T ++ LC G + + +++ ++G + L Y LL+ L + + L
Sbjct: 1007 PDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSL 1066
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
++EMQ+ G + Y +I L G+ A + EE L KG+ P+ Y+ L
Sbjct: 1067 FNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSV 1126
Query: 525 SNKLESAYNLFRKIKIA 541
S +SAY + ++ +
Sbjct: 1127 SGSTDSAYAAYGRMIVG 1143
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 197/469 (42%), Gaps = 53/469 (11%)
Query: 110 LKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVI 169
+K KG++ D + V L G++ G A +F +K V+ D +Y ++
Sbjct: 510 MKSKGIVPDVVAGNAVLFGLAKSGRL-------GMAKRVFHE--LKAMGVSPDTITYTMM 560
Query: 170 VKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGL 229
+K + FD + DM + PD+ ++ ++D+ +AG+ +A Q+ +L++ L
Sbjct: 561 IKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNL 620
Query: 230 KFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMER 288
+ + N +L L + V L M N++TYN ++ K G V +
Sbjct: 621 EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALD 680
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
+L + +G PD +++ +I GL + R ++A +F MK K PD ++ +++
Sbjct: 681 MLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFV 739
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDT----YTRLISGLLK-------------------- 384
+G E + K Y +P T L+ G+LK
Sbjct: 740 KIGLMKEALHIIK---EYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGIT 796
Query: 385 ---------------SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
+K +A E+ ++ G+ TG+ S + L A +
Sbjct: 797 LDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGL 856
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ + +++GC Y LLL + + +L + EM GY S Y +I+GL
Sbjct: 857 FAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVK 916
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+LE A+ + + +GF P+ Y L + LL + ++E A NLF ++
Sbjct: 917 SRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 965
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 150/320 (46%), Gaps = 3/320 (0%)
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEI 293
S N +L + VG + +F+ M+ +++ NV T+ + G G + L +
Sbjct: 171 SCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVM 230
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
G ++ T++ L+ L ++G +A+EV+ M G P Y+ ++ + D
Sbjct: 231 KEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDV 290
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
+ + + M ++ +PN+ +YT I L ++R+ +A + EM + G P T T
Sbjct: 291 ETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVL 350
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
++ LC G A ++ K +K K Y LL + + G+ ++++W+ M+ GY
Sbjct: 351 IQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGY 410
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
+ Y VI LC +G++ A+ + +E +KG P + Y+ L + L +++ A
Sbjct: 411 NDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALE 470
Query: 534 LFRKIKI--ARQNDYARRLW 551
LF+ + I + N Y L+
Sbjct: 471 LFKYMDIHGPKPNGYTHVLF 490
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 125/246 (50%), Gaps = 1/246 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN I+ L + + + ++ ++ +G +P T ++D ++AG++ A + +
Sbjct: 906 TYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 965
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
++G K + N++L + LF M + + ++ +Y I+I K GQ+
Sbjct: 966 LEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQL 1025
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ ++++ G PD +T++ LI+GLG++ R+++A+ +F+ M++KG P+ YN++
Sbjct: 1026 NDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSL 1085
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I + G E K Y+ + + +PN+ TY LI G S A + M+ G
Sbjct: 1086 ILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGC 1145
Query: 404 VPSTGT 409
+P++ T
Sbjct: 1146 LPNSST 1151
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 140/330 (42%), Gaps = 69/330 (20%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+ SYN ++ L D + ++M + G PD T ++++D+ G+ +
Sbjct: 830 VSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM---GKSMRIE 886
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
+ML E+ +H S + +TYN +ISG
Sbjct: 887 EMLKVQEE--------------------MHRKGYESTY-----------VTYNTIISGLV 915
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC----- 333
K ++ + + ++++GFSP T+ L++GL +AGRI+DA +F+ M E GC
Sbjct: 916 KSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCT 975
Query: 334 ------------------------------GPDTNAYNAVISNYISVGDFDECMKYYKGM 363
PD +Y +I G ++ + Y++ +
Sbjct: 976 IYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQL 1035
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
EP++ TY LI GL KS+++ +A+ +F EM +GIVP+ T S + L G
Sbjct: 1036 LEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKA 1095
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
A MY++ G K ++ Y L+R S
Sbjct: 1096 AEAGKMYEELLTKGWKPNVFTYNALIRGYS 1125
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 96/461 (20%), Positives = 186/461 (40%), Gaps = 71/461 (15%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F A + P V S N ++ + M V M ++ V ++ T + +
Sbjct: 156 FRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLG 215
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVM 268
G + A L +++ G+ +A + N +++ L + A ++ M V+ +V
Sbjct: 216 VEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVR 275
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TY++++ + K V + +L+E+ A G P+ +++ I LG+A R D+A + M
Sbjct: 276 TYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEM 335
Query: 329 KEKGCGPDTNAYNAVIS----------------------------NYISV-------GDF 353
+ +GC PD + +I YI++ G+
Sbjct: 336 ENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGES 395
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS----TGT 409
M+ + M + N+ YT +I L + +V +ALE+F+EM +GIVP
Sbjct: 396 QSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 455
Query: 410 ITSFLEP------------LCSYGP-PHA------------------AMMMYKKARKVGC 438
I+ FL+ + +GP P+ A+ Y+ + G
Sbjct: 456 ISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGI 515
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ A +L L+ G+ GM ++HE++ G D Y +I + + AV
Sbjct: 516 VPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVK 575
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + + P LV + L + L + + + A+ +F ++K
Sbjct: 576 IFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLK 616
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 131/322 (40%), Gaps = 56/322 (17%)
Query: 34 LSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVD 93
+YN LL K+M + V +E+ S++ ++ + S VK +A+D
Sbjct: 870 FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTII----SGLVKSRRLEQAID 925
Query: 94 EF-------LLPEERLRGVFLQKLKGKGVIEDA------LWNVNVDLSLDVVGKVVNRGN 140
+ P G L L G IEDA + + + ++N
Sbjct: 926 LYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHR 985
Query: 141 LSG--EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
++G E + F + + D+KSY +I+
Sbjct: 986 IAGNTEKVCHLFQDMVDQ-GINPDIKSYTIII---------------------------- 1016
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
D+ +AGQ+ + +L + GL+ D + N+++ L + + A SLFN
Sbjct: 1017 -------DTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNE 1069
Query: 259 MKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
M+ K ++ N+ TYN +I K G+ E ++ +E++ +G+ P+ T++ LI G +G
Sbjct: 1070 MQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGS 1129
Query: 318 IDDAIEVFDTMKEKGCGPDTNA 339
D A + M GC P+++
Sbjct: 1130 TDSAYAAYGRMIVGGCLPNSST 1151
>gi|297720523|ref|NP_001172623.1| Os01g0816000 [Oryza sativa Japonica Group]
gi|56785065|dbj|BAD82704.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125572420|gb|EAZ13935.1| hypothetical protein OsJ_03862 [Oryza sativa Japonica Group]
gi|255673815|dbj|BAH91353.1| Os01g0816000 [Oryza sativa Japonica Group]
Length = 530
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 189/426 (44%), Gaps = 13/426 (3%)
Query: 104 GVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDV 163
G + +G++E S VV V++R S A F WA P A
Sbjct: 92 GFHADAARARGLLE----RCGATASEPVVVAVLDRLRNSCAAAHAAFRWASAQPGYAPGR 147
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+ + ++ L + + FD +L M + + + +++ + A V A+
Sbjct: 148 HACHSMLAILAKHRRFDDARALLDQMRRSSLASPAAVM-LLIRRYCAARDVAGAVAAFRA 206
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQV 283
L + G + + +L LC+ +V A L S + + F ++N+V++GW + +
Sbjct: 207 LPNLGFRPGVAEFHGLLTALCRYKNVQDAEHLLLSSEKEFPFETKSFNVVLNGWCNMVRS 266
Query: 284 V-EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V E +R + +G D +++ +I +AG +D +++F+ MKE G PD YNA
Sbjct: 267 VREAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDTVMKLFNRMKEAGVIPDRKIYNA 326
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
V+ +E + M P+ T+ LI L K+R+V +A ++ ++ML RG
Sbjct: 327 VVYALAKGQCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCKARQVQEARKMLDDMLGRG 386
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
+ PS T + L+ S P + K +++ C + + +L+R+ + + +
Sbjct: 387 LSPSVRTFHALLDVARS---PIEVFDLLDKMKELQCDPEMDTFIMLIRKFCRWRQHDSVE 443
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR----LVYSKL 518
LW M +G D Y +I GL G+LE + EE KGF P + ++ + L
Sbjct: 444 KLWSAMPANGLSPDRSAYIVLIHGLFLNGRLEESAKYYEEMKAKGFPPEKKTEEMIQAWL 503
Query: 519 SNKLLA 524
S + LA
Sbjct: 504 SGRELA 509
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 98/244 (40%), Gaps = 11/244 (4%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
G++P ++ L + R DDA + D M+ A +I Y + D
Sbjct: 142 GYAPGRHACHSMLAILAKHRRFDDARALLDQMRRSSLA-SPAAVMLLIRRYCAARDVAGA 200
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML---DRGIVPSTGTITSF 413
+ ++ + + P + + L++ L + + V DA E +L ++ T +
Sbjct: 201 VAAFRALPNLGFRPGVAEFHGLLTALCRYKNVQDA----EHLLLSSEKEFPFETKSFNVV 256
Query: 414 LEPLCSYGPPHAAMMMYKKARKV-GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
L C+ + A ++ G K + +Y ++ S G ++ L++ M+E+G
Sbjct: 257 LNGWCNMVRSVREAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDTVMKLFNRMKEAG 316
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESL-RKGFCPSRLVYSKLSNKLLASNKLESA 531
D +IY V+ L GQ N + S+ KG P ++ L L + +++ A
Sbjct: 317 VIPDRKIYNAVVYALAK-GQCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCKARQVQEA 375
Query: 532 YNLF 535
+
Sbjct: 376 RKML 379
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 193/437 (44%), Gaps = 36/437 (8%)
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMD 206
VL+ ++ V +V SY + ++ LG+ K FD +L+ M EG PD+ T ++++
Sbjct: 214 VLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQ 273
Query: 207 SFIRAGQVYKA-------------------IQMLGRLEDFG-----------LKFDAESL 236
AG++ A I +L + D G +K D +
Sbjct: 274 VLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYND 333
Query: 237 NVVLW-----CLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVL 290
NVV + LCQ V A +F+ MK K ++ +YN +ISG+ K + + +
Sbjct: 334 NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELF 393
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
K + G P+ T I G++G AI+ ++ MK KG PD A NAV+
Sbjct: 394 KHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKS 453
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
G + + + + P+ TYT +I K+ K +A+++F +M++ VP +
Sbjct: 454 GRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAV 513
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
S ++ L G A ++ + +++ + + Y LL L GK ++ L EM
Sbjct: 514 NSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYH 573
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
S YP + Y ++ LC G + +A+ ++ KG P Y+ + L+ +
Sbjct: 574 SNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNE 633
Query: 531 AYNLFRKIKIARQNDYA 547
A+++F ++K DYA
Sbjct: 634 AFSIFCQMKKVLIPDYA 650
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 180/383 (46%), Gaps = 9/383 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ SYN ++ L + + ++ ++ M K + PD TL ++ SF++ G + +A+ ++
Sbjct: 614 DLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHII 672
Query: 222 GRLEDF----GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
+D+ G K D S + ++ + ++ + + + + + +I
Sbjct: 673 ---KDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKH 729
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K + +E ++K+ + G S + ++ LI GL ID A +F MKE GCGPD
Sbjct: 730 LCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPD 789
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN ++ +E +K + M E TY +ISGL+KSR++ A++++
Sbjct: 790 EFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYY 849
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
++ +G P+ T L+ L G A ++ + + GCK + T Y +LL G
Sbjct: 850 NLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAG 909
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ L+ +M + G D + Y +I LC GQL + + + L G P + Y+
Sbjct: 910 NTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYN 969
Query: 517 KLSNKLLASNKLESAYNLFRKIK 539
L + L S +LE A +LF +++
Sbjct: 970 LLIDGLGKSKRLEEAVSLFNEMQ 992
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 171/377 (45%), Gaps = 11/377 (2%)
Query: 169 IVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
I+K G K +F +A G+ D L ++ + + +A +++ + + FG
Sbjct: 695 ILKKAGIEKSIEFA----EIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFG 750
Query: 229 LKFDAESLNVVLWCLCQRLHVGAASSLFNSMK----GKVLFNVMTYNIVISGWSKLGQVV 284
+ N ++ L + A LF MK G F TYN+++ K ++
Sbjct: 751 VSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEF---TYNLLLDAMGKSMRIE 807
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
EM +V +E+ +G+ +T++ +I GL ++ R++ AI+++ + +G P Y ++
Sbjct: 808 EMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLL 867
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ G ++ + M Y C+ N Y L++G + +F++M+D+GI
Sbjct: 868 DGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGIN 927
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P + T ++ LC G + + +++ ++G + L Y LL+ L + + L
Sbjct: 928 PDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSL 987
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
++EMQ+ G + Y +I L G+ A + EE L KG+ P+ Y+ L
Sbjct: 988 FNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSV 1047
Query: 525 SNKLESAYNLFRKIKIA 541
S +SAY + ++ +
Sbjct: 1048 SGSTDSAYAAYGRMIVG 1064
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 158/357 (44%), Gaps = 34/357 (9%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN ++ L D + ++M + G PD T ++++D+ G+ + +ML E
Sbjct: 758 YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM---GKSMRIEEMLKVQE 814
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE 285
+ +H S + +TYN +ISG K ++ +
Sbjct: 815 E--------------------MHRKGYESTY-----------VTYNTIISGLVKSRRLEQ 843
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+ ++++GFSP T+ L++GL +AGRI+DA +F+ M E GC + YN +++
Sbjct: 844 AIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLN 903
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+ G+ ++ ++ M P++ +YT +I L K+ ++ D L F ++L+ G+ P
Sbjct: 904 GHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEP 963
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
T ++ L A+ ++ + +K G +L Y L+ L GK ++
Sbjct: 964 DLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMY 1023
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
E+ G+ + Y +I G G ++A + G P+ Y +L N+L
Sbjct: 1024 EELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQLPNQL 1080
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 194/469 (41%), Gaps = 53/469 (11%)
Query: 110 LKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVI 169
+K KG++ D + V L G++ G A +F +K V+ D +Y ++
Sbjct: 431 MKSKGIVPDVVAGNAVLFGLAKSGRL-------GMAKRVFHE--LKAMGVSPDTITYTMM 481
Query: 170 VKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGL 229
+K + FD + DM + PD+ ++ ++D+ +AG+ +A ++ +L++ L
Sbjct: 482 IKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNL 541
Query: 230 KFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMER 288
+ + N +L L + V L M N++TYN ++ K G V +
Sbjct: 542 EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALD 601
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
+L + +G PD +++ +I GL + R ++A +F MK K PD ++ +++
Sbjct: 602 MLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYATLCTILPSFV 660
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDT----YTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+G E + K Y +P T L+ G+LK + ++E E + GI
Sbjct: 661 KIGLMKEALHIIK---DYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGIT 717
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKK-------------------------------- 432
+ ++ LC A + KK
Sbjct: 718 LDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGL 777
Query: 433 ---ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+++GC Y LLL + + +L + EM GY S Y +I+GL
Sbjct: 778 FAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVK 837
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+LE A+ + + +GF P+ Y L + LL + ++E A NLF ++
Sbjct: 838 SRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 886
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 148/320 (46%), Gaps = 3/320 (0%)
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEI 293
S N +L + VG + +F+ M+ +++ NV T+ + G G + L +
Sbjct: 92 SCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVM 151
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
G ++ T++ L+ L ++G +A+EV+ M G P Y+ ++ + D
Sbjct: 152 KEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDV 211
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
+ + + M ++ +PN+ +YT I L ++++ +A + +M + G P T T
Sbjct: 212 ETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVL 271
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
++ LC G A ++ K +K K Y LL + G ++++W+ M+ GY
Sbjct: 272 IQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGY 331
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
+ Y VI LC +G++ A+ + +E +KG P + Y+ L + L +++ A
Sbjct: 332 NDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALE 391
Query: 534 LFRKIKI--ARQNDYARRLW 551
LF+ + I + N Y L+
Sbjct: 392 LFKHMDIHGPKPNGYTHVLF 411
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/461 (21%), Positives = 187/461 (40%), Gaps = 71/461 (15%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F A + P VA S N +++ + M V M ++ V ++ T + +
Sbjct: 77 FRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLG 136
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVM 268
G + A L +++ G+ +A + N +++ L + A ++ M V+ +V
Sbjct: 137 VEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVR 196
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TY++++ + K V + +L+E+ A G P+ +++ I LG+A R D+A + M
Sbjct: 197 TYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKM 256
Query: 329 KEKGCGPDTNAYNAVIS----------------------------NYISV-------GDF 353
+ +GC PD + +I YI++ GD
Sbjct: 257 ENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDS 316
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS----TGT 409
M+ + M + N+ YT +I L + +V +ALE+F+EM +GIVP
Sbjct: 317 QSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 376
Query: 410 ITSFLEP------------LCSYGP-PHA------------------AMMMYKKARKVGC 438
I+ FL+ + +GP P+ A+ Y+ + G
Sbjct: 377 ISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGI 436
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ A +L L+ G+ GM ++HE++ G D Y +I + + AV
Sbjct: 437 VPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVK 496
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + + P L + L + L + + + A+ +F ++K
Sbjct: 497 IFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLK 537
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 136/323 (42%), Gaps = 56/323 (17%)
Query: 34 LSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVD 93
+YN LL K+M + V +E+ S++ ++ + S VK +A+D
Sbjct: 791 FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTII----SGLVKSRRLEQAID 846
Query: 94 EF-------LLPEERLRGVFLQKLKGKGVIEDA--LWNVNVDL----SLDVVGKVVNRGN 140
+ P G L L G IEDA L+N ++ + + ++N
Sbjct: 847 LYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHR 906
Query: 141 LSG--EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
++G E + F + + D+KSY +I+
Sbjct: 907 IAGNTEKVCHLFQDMVDQ-GINPDIKSYTIII---------------------------- 937
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
D+ +AGQ+ + +L + GL+ D + N+++ L + + A SLFN
Sbjct: 938 -------DTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNE 990
Query: 259 MKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
M+ K ++ N+ TYN +I K G+ E ++ +E++ +G+ P+ T++ LI G +G
Sbjct: 991 MQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGS 1050
Query: 318 IDDAIEVFDTMKEKGCGPDTNAY 340
D A + M GC P+++ Y
Sbjct: 1051 TDSAYAAYGRMIVGGCLPNSSTY 1073
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 173/379 (45%), Gaps = 11/379 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN ++ + N+ M K GV P + T + ++ + + G + +A+++
Sbjct: 400 DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLY 459
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGA-----ASSLFNSMK-GKVLFNVMTYNIVIS 275
+ G K NVV + R ++ A +L + MK V N TYN++I+
Sbjct: 460 SEMPMEGFK-----PNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLIN 514
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G + +V E++ +LK ++EGF P +T++ +I G +AG + A V+ M+EKG P
Sbjct: 515 GICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPP 574
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+ Y + I Y G D +K + +P++ Y LI+G + ++ AL++
Sbjct: 575 NIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLL 634
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
+L G+ P+T S + + Y+ K G + Y L+ S
Sbjct: 635 VILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKD 694
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
G L+L+ EM GY D + + GLC G ++ A ++EE R P+ +Y
Sbjct: 695 GNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIY 754
Query: 516 SKLSNKLLASNKLESAYNL 534
+ L N L KL+ A+ L
Sbjct: 755 NMLINGYLRDCKLQEAFRL 773
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 176/410 (42%), Gaps = 37/410 (9%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y V+++ + + M +G+ P LS+V+ + + A+ + +
Sbjct: 335 YGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMA 394
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVV 284
D GL D + N ++ CQ + A +LF+ MK V ++ TYN ++ G+ K G +
Sbjct: 395 DSGLP-DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMD 453
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E ++ E+ EGF P+ +T+ L+ G D+A + D MK+ G + YN +I
Sbjct: 454 EAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLI 513
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ V E K S P M TY +I+G +K+ + A V+++M ++G+
Sbjct: 514 NGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLP 573
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR------------- 451
P+ T TSF++ C G A+ M R+ G + + AY L+
Sbjct: 574 PNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQL 633
Query: 452 -------------------LSGFGKCGMLLDL---WHEMQESGYPSDGEIYEYVIAGLCN 489
++G+ M+ ++ + M + G +D Y +I G
Sbjct: 634 LVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSK 693
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G + A+ + E + KG+ P ++ L++ L S ++ A L +++
Sbjct: 694 DGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMR 743
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 162/378 (42%), Gaps = 38/378 (10%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ LF +K V + +YN ++ ++ D + S+M EG P++ T
Sbjct: 419 EALNLFDR--MKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYIT 476
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS-MKGK 262
+M +I A +L ++ G+ + + NV++ +C V + S M
Sbjct: 477 LMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEG 536
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ +MTYN +I+G+ K G + V +++ +G P+ +T++ I+G R G D A+
Sbjct: 537 FIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMAL 596
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFD---------------------------- 354
++ + ++ +G PD AYNA+I+ + G+
Sbjct: 597 KMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGY 656
Query: 355 -------ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
E K+Y+ M + TYT LI G K VA ALE++ EM+ +G +P
Sbjct: 657 KNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDA 716
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T T+ LC G A + ++ R++ + ++ Y +L+ K L E
Sbjct: 717 FTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDE 776
Query: 468 MQESGYPSDGEIYEYVIA 485
M G D Y+ +++
Sbjct: 777 MLNMGIQPDDTTYDILVS 794
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 145/335 (43%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
N+ + K+G+ P +++ + G KA ++ ++ GL L++VL L
Sbjct: 318 NLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGL 377
Query: 244 CQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
A LF M L +V TYN +I + ++ E + + G P
Sbjct: 378 LNDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSIN 437
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T++ L+ G + G +D+A++++ M +G P+ Y ++ YI+ DFD M
Sbjct: 438 TYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEM 497
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
N TY LI+G+ +V + + + + G +P+ T S + G
Sbjct: 498 KQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMM 557
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
+A +Y++ R+ G ++ Y + G M L + ++++ G D Y +
Sbjct: 558 GSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNAL 617
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
I G C G + +A+ ++ L+ G P+ +VY+ L
Sbjct: 618 INGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSL 652
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 157/358 (43%), Gaps = 4/358 (1%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVL-WC 242
+ + M GV PD+++ + ++ R A+ + + G + DA + ++ C
Sbjct: 143 DTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSAC 202
Query: 243 LCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
L + +H A LF+ M G ++ + Y + I+ KLG R+L+E+ GF
Sbjct: 203 LKEGMHEDAVR-LFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTC 261
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
T+ +++ L + GR+++A+ V D M++ G D ++ Y + + +K
Sbjct: 262 DFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFK 321
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
P Y LI G + A E+ +M +G++PST ++ L+ L +
Sbjct: 322 ETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDR 381
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
A+ ++++ G T Y L+ K L+L+ M+++G Y
Sbjct: 382 RWKDAVCLFEEMADSGLPDVFT-YNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYN 440
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ G C G ++ AV + E +GF P+ + Y L +A ++AY L ++K
Sbjct: 441 SLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMK 498
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 110/251 (43%), Gaps = 3/251 (1%)
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
E+ G+ D+ F L+ + G +DA+ +FD M PD Y I+ +G
Sbjct: 182 EMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLG 241
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
D ++ + M + TY ++ L+K+ ++ +AL V +EM D G T
Sbjct: 242 DGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVAT 301
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
+ + C A+ ++K+ K G + Y +L+R G +L +M
Sbjct: 302 TLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQ 361
Query: 472 G-YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G PS E+ V+ GL N + ++AV + EE G P Y+ L + ++KL
Sbjct: 362 GLLPSTFEL-SLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLRE 419
Query: 531 AYNLFRKIKIA 541
A NLF ++K A
Sbjct: 420 ALNLFDRMKKA 430
>gi|255661038|gb|ACU25688.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 375
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 170/348 (48%), Gaps = 3/348 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V ++MA+ V+PD + +++ + R G++ ++ + G + + S N+++ L
Sbjct: 12 VYNEMAENKVSPDAVVYNAMLNGYFRVGRIKNCFELWELMGRKGSR-NVASFNIMMRGLF 70
Query: 245 QRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
V S++ M + + +TY I++ G K G + VL+ +G D+
Sbjct: 71 DNGEVDQVISIWELMIENGFGEDSITYGILVDGLCKNGYANKSLHVLEIAEGKGGVLDAF 130
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
++S +I GL + ++D+A+ V M + GC P+T+ YNA+I+ ++ F++ + ++ M
Sbjct: 131 SYSAMINGLCKEAKLDEAVSVLSGMVKNGCKPNTHVYNALINGFVGASKFEDATRVFREM 190
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
++ C PN+ TY LI+GL K + +A ++ +EML++G P T + ++ LC
Sbjct: 191 GTH-CSPNIVTYNTLINGLCKGERFGEAYDLVKEMLEKGWKPGVSTYSLLMKGLCLGHKL 249
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+ ++ + G K + + +L+ L GK + L L+ M + Y +
Sbjct: 250 DMAINLWNQVIAKGFKPDVQMHNILIHGLCSVGKTQLALSLYFNMNXWNCAPNLVTYNTL 309
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
+ G G L NA+ + LR G P + Y+ L + N++ A
Sbjct: 310 MEGFYKDGDLRNALAIWAHILRNGLQPDIISYNITLKGLCSCNRISGA 357
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 141/317 (44%), Gaps = 35/317 (11%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
W + +++V S+N++++ L D + ++ M + G D T I++D +
Sbjct: 48 WELMGRKGSRNVASFNIMMRGLFDNGEVDQVISIWELMIENGFGEDSITYGILVDGLCKN 107
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH----------------------- 248
G K++ +L E G DA S + ++ LC+
Sbjct: 108 GYANKSLHVLEIAEGKGGVLDAFSYSAMINGLCKEAKLDEAVSVLSGMVKNGCKPNTHVY 167
Query: 249 -------VGA-----ASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAE 296
VGA A+ +F M N++TYN +I+G K + E ++KE++ +
Sbjct: 168 NALINGFVGASKFEDATRVFREMGTHCSPNIVTYNTLINGLCKGERFGEAYDLVKEMLEK 227
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
G+ P T+S L++GL ++D AI +++ + KG PD +N +I SVG
Sbjct: 228 GWKPGVSTYSLLMKGLCLGHKLDMAINLWNQVIAKGFKPDVQMHNILIHGLCSVGKTQLA 287
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
+ Y M+ +NC PN+ TY L+ G K + +AL ++ +L G+ P + L+
Sbjct: 288 LSLYFNMNXWNCAPNLVTYNTLMEGFYKDGDLRNALAIWAHILRNGLQPDIISYNITLKG 347
Query: 417 LCSYGPPHAAMMMYKKA 433
LCS A++ A
Sbjct: 348 LCSCNRISGAILFLHDA 364
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 158/357 (44%), Gaps = 9/357 (2%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+ D YN ++ R + M ++G + ++ + +I+M G+V + I
Sbjct: 21 VSPDAVVYNAMLNGYFRVGRIKNCFELWELMGRKG-SRNVASFNIMMRGLFDNGEVDQVI 79
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV-LFNVMTYNIVISGW 277
+ + + G D+ + +++ LC+ + + + +GK + + +Y+ +I+G
Sbjct: 80 SIWELMIENGFGEDSITYGILVDGLCKNGYANKSLHVLEIAEGKGGVLDAFSYSAMINGL 139
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K ++ E VL +V G P++ ++ LI G A + +DA VF M C P+
Sbjct: 140 CKEAKLDEAVSVLSGMVKNGCKPNTHVYNALINGFVGASKFEDATRVFREMGTH-CSPNI 198
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I+ F E K M +P + TY+ L+ GL K+ A+ ++ +
Sbjct: 199 VTYNTLINGLCKGERFGEAYDLVKEMLEKGWKPGVSTYSLLMKGLCLGHKLDMAINLWNQ 258
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
++ +G P + LCS G A+ +Y C +L Y L+ GF K
Sbjct: 259 VIAKGFKPDVQMHNILIHGLCSVGKTQLALSLYFNMNXWNCAPNLVTYNTLME---GFYK 315
Query: 458 CGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
G L L +W + +G D Y + GLC+ ++ A+L + +++ K P+
Sbjct: 316 DGDLRNALAIWAHILRNGLQPDIISYNITLKGLCSCNRISGAILFLHDAVTKKLVPT 372
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 2/252 (0%)
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
ERV E+ SPD++ ++ ++ G R GRI + E+++ M KG + ++N ++
Sbjct: 10 ERVYNEMAENKVSPDAVVYNAMLNGYFRVGRIKNCFELWELMGRKG-SRNVASFNIMMRG 68
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
G+ D+ + ++ M + TY L+ GL K+ +L V E +G V
Sbjct: 69 LFDNGEVDQVISIWELMIENGFGEDSITYGILVDGLCKNGYANKSLHVLEIAEGKGGVLD 128
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
+ ++ + LC A+ + K GCK + Y L+ G K ++
Sbjct: 129 AFSYSAMINGLCKEAKLDEAVSVLSGMVKNGCKPNTHVYNALINGFVGASKFEDATRVFR 188
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
EM P+ Y +I GLC + A +++E L KG+ P YS L L +
Sbjct: 189 EMGTHCSPNI-VTYNTLINGLCKGERFGEAYDLVKEMLEKGWKPGVSTYSLLMKGLCLGH 247
Query: 527 KLESAYNLFRKI 538
KL+ A NL+ ++
Sbjct: 248 KLDMAINLWNQV 259
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 100/225 (44%), Gaps = 2/225 (0%)
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+G D A V++ M E PD YNA+++ Y VG C + ++ M N+
Sbjct: 2 ESGDXDGAERVYNEMAENKVSPDAVVYNAMLNGYFRVGRIKNCFELWELMGRKGSR-NVA 60
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
++ ++ GL + +V + ++E M++ G + T ++ LC G + ++ + + A
Sbjct: 61 SFNIMMRGLFDNGEVDQVISIWELMIENGFGEDSITYGILVDGLCKNGYANKSLHVLEIA 120
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
G L +Y ++ L K + + M ++G + +Y +I G +
Sbjct: 121 EGKGGVLDAFSYSAMINGLCKEAKLDEAVSVLSGMVKNGCKPNTHVYNALINGFVGASKF 180
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
E+A V E + P+ + Y+ L N L + AY+L +++
Sbjct: 181 EDATRVFRE-MGTHCSPNIVTYNTLINGLCKGERFGEAYDLVKEM 224
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 171/354 (48%), Gaps = 2/354 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +V SYN ++ R+K D V S++ ++G+ P+ T SI++D R A+
Sbjct: 474 IGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNAL 533
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
+++ + ++ + ++ LC+ A L +M + ++ + M+YN +I G
Sbjct: 534 EVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDG 593
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K G++ +E+ G SP+ +T++ L+ GL + R+D A+E+ D MK KG D
Sbjct: 594 FFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLD 653
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
AY A+I + + + + + P+ Y LISG + AL++++
Sbjct: 654 IPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYK 713
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+ML G+ GT T+ ++ L G A +Y + + VG Y +++ LS G
Sbjct: 714 KMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKG 773
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
+ ++ ++ EM+++ + IY VIAG G L+ A + +E L KG P
Sbjct: 774 QFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILP 827
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 162/370 (43%), Gaps = 2/370 (0%)
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
N I+ L ++ D +LS M G+ P++ + + VM R + A + + +
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 227 FGLKFDAESLNVVL-WCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE 285
GLK + + ++++ C A + + + N + Y +I+G K+GQ +
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 286 MERVLKEIVAEG-FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+L ++ E ++++ +I+G + G +D A+ ++ M G P+ Y +++
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ D+ ++ M + + ++ Y LI G K + A +F E+L+ G+
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN 686
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
PS S + + G AA+ +YKK K G + L Y L+ L G + +L
Sbjct: 687 PSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASEL 746
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+ EMQ G D IY ++ GL GQ V + EE + P+ L+Y+ +
Sbjct: 747 YTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYR 806
Query: 525 SNKLESAYNL 534
L+ A+ L
Sbjct: 807 EGNLDEAFRL 816
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 129/246 (52%), Gaps = 1/246 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SYN I+ + D +M G++P++ T + +M+ + ++ +A++M +
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMT-YNIVISGWSKLGQV 283
++ G+K D + ++ C+R ++ +AS+LF+ + + L YN +ISG+ LG +
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
V + K+++ +G D T++ LI+GL + G + A E++ M+ G PD Y +
Sbjct: 706 VAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVI 765
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
++ G F + +K ++ M N PN+ Y +I+G + + +A + +EMLD+GI
Sbjct: 766 VNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Query: 404 VPSTGT 409
+P T
Sbjct: 826 LPDGAT 831
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 97/446 (21%), Positives = 190/446 (42%), Gaps = 74/446 (16%)
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
N + AL +R + S M GV+ D T ++M + +R + +A+++L R +
Sbjct: 202 NRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIE 261
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--NVMTYNIVISGWSKLGQVV 284
G + D+ ++ + C+ L + A+SL MK K L + TY VI K G +
Sbjct: 262 RGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMD 321
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ R+ E++++G S + + + LI G + + A+ +FD M+++G P++ ++ +I
Sbjct: 322 DAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLI 381
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ G+ ++ +++YK M P++ +I G LK +K +AL++F+E + G+
Sbjct: 382 EWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA 441
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY-----------KLLLRRL- 452
+ + L LC G A + K G ++ +Y + L R+
Sbjct: 442 -NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIV 500
Query: 453 -SGFGKCGM----------------------LLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
S + G+ L++ + M S +G +Y+ +I GLC
Sbjct: 501 FSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCK 560
Query: 490 IGQ------------------------------------LENAVLVMEESLRKGFCPSRL 513
+GQ +++AV EE G P+ +
Sbjct: 561 VGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVI 620
Query: 514 VYSKLSNKLLASNKLESAYNLFRKIK 539
Y+ L N L +N+++ A + ++K
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMRDEMK 646
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 103/245 (42%), Gaps = 1/245 (0%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
GF +S F++L+ + + D A+++ + M E P N +S + E
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
+ Y M + + + T L+ L+ K A+ALEV ++RG P + + ++
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277
Query: 417 LC-SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
C + A ++ + K C S Y ++ G + L EM G
Sbjct: 278 CCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISM 337
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ +I G C L +A+++ ++ ++G P+ + +S L + ++E A +
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFY 397
Query: 536 RKIKI 540
+K+++
Sbjct: 398 KKMEV 402
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 88/219 (40%), Gaps = 3/219 (1%)
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
++ D+ K G ++ A+N +++ Y D + M + P R +S L
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
++ + +A E++ M+ G+ T + P A+ + +A + G +
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESG--YPSDGEIYEYVIAGLCNIGQLENAVLVM 500
Y L ++ M L EM+E PS E Y VI G +++A+ +
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQ-ETYTSVILASVKQGNMDDAIRLK 327
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+E L G + + + L +N L SA LF K++
Sbjct: 328 DEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKME 366
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 194/432 (44%), Gaps = 41/432 (9%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ LF N P + ++ ++ + + K +D + ++ +M G+ DL T +I
Sbjct: 52 EAIDLFCNMIQSRP--LPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-K 262
V++ R + A+ ++G++ FG + D +++ ++ CQ V A L + M+ +
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169
Query: 263 VLFNVMTYNIVISGWSKLGQV-----------------------------------VEME 287
+V+ YN +I G+ K G V +
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
R+++++V P+ +TF+ LI R G+ +A + ++ M + PD YN++I
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
G DE + M + C P++ TY LI+G K+++V + ++ EM RG+V T
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDT 349
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T + ++ G P AA ++ ++G + ++ Y +LL L + L L+
Sbjct: 350 VTFNTIIQGYFQAGRPDAAQEIFS---RMGSRPNIRTYSILLYGLCYNWRVEKALVLFES 406
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
MQ+S D Y VI G+C IG +E+A + KG P + Y+ + +
Sbjct: 407 MQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRL 466
Query: 528 LESAYNLFRKIK 539
+ A L+RK++
Sbjct: 467 WDKADFLYRKMQ 478
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 102/224 (45%), Gaps = 6/224 (2%)
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
+D+AI++F M + P ++ ++SN ++D + + M ++ TY
Sbjct: 50 LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
+I+ L + + AL V +M+ G P T++S + C A+ + K ++
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169
Query: 438 CKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
CKL + Y + + GF K G++ L L+ M+ G +D Y ++ GLC G+
Sbjct: 170 CKLDVVIYNTI---IDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRS 226
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+A +M + + + P+ + ++ L N + K A + ++
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEM 270
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 192/408 (47%), Gaps = 19/408 (4%)
Query: 135 VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
+V+RG+L +A + + + P+ A N +V+ L RR D V+
Sbjct: 81 LVHRGDL--DAALRLVESSPRPPDAAL----ANRLVRDLCRRGRPDDAERVVGACGPAAT 134
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
+ + D + RAG++ A +++G + ++ +A + N ++ LC+R V A S
Sbjct: 135 ---VVAYGALTDGYCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALS 188
Query: 255 LFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
+ + M + +V+TYNI++ K + ++ + AEG +P+++T++ L++G+
Sbjct: 189 VLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMC 248
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV---GDFDECMKYYKGMSSYNCEP 370
G +DDA+E+ + GC P T YN V+ S GD DE + M NC P
Sbjct: 249 GEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTE---MLRENCPP 305
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
N T+ +I L + + A+++ E+M G + T + + LC AM +
Sbjct: 306 NEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLL 365
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
K + GCK + Y LL+ L + +L M ++G D + +I LC
Sbjct: 366 SKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQK 425
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G + +A+ V ++ KG P+ + YS + + L + KL+ A LF ++
Sbjct: 426 GLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEM 473
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 176/378 (46%), Gaps = 2/378 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V + +YN ++ L R +VL DM G PD+ T +I++++ + +A+
Sbjct: 163 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 222
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+++ + G + + NV++ +C V A L ++ + + YN V+ G
Sbjct: 223 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 282
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ + + ++ E++ E P+ TF+ +I L R G + AI++ + M + GC +
Sbjct: 283 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 342
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YNA+I+ + D M M SY C+P++ TY L+ GL + + DA E+ +
Sbjct: 343 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDN 402
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M G +P T + + LC G A+ ++K+ GC + Y ++ L+ K
Sbjct: 403 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 462
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L+L++EM G+ D +IY+ + L + +E A+ + + G P ++Y+
Sbjct: 463 LDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNA 521
Query: 518 LSNKLLASNKLESAYNLF 535
+ L + K E A ++
Sbjct: 522 ILLGLCRNGKTEFAIDIM 539
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 172/381 (45%), Gaps = 2/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
A DV +YN++++A + + + ++ M EG P+ T +++MD G V A+
Sbjct: 198 CAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDAL 257
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++L L G K + N VL LC G A L M + N T+N+VI
Sbjct: 258 ELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSL 317
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G + + ++L+++ G + + +T++ +I GL +D A+ + MK GC PD
Sbjct: 318 CRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDI 377
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN ++ S + + + M+ C P+ T+ LI L + + DA+EVF++
Sbjct: 378 VTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQ 437
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M D+G P++ T ++ + L A+ ++ + G Y+LL L+
Sbjct: 438 MPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDT 496
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+ ++Q+SG +Y ++ GLC G+ E A+ +M + G P L Y
Sbjct: 497 IEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVI 556
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L L L A L K+
Sbjct: 557 LIEGLAYEGYLNEARELLIKL 577
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 117/251 (46%), Gaps = 3/251 (1%)
Query: 155 KHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQV 214
KH ++ +YN I+ L ++ D +LS M G PD+ T + ++ A Q
Sbjct: 335 KH-GCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQW 393
Query: 215 YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIV 273
A +++ + G D + N ++ LCQ+ + A +F M K N +TY+ +
Sbjct: 394 VDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTI 453
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
ISG +K ++ + + E+ +GF+PD + + L E L I++AI+ +++ G
Sbjct: 454 ISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGI 512
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
P T YNA++ G + + M S C P+ TY LI GL + +A E
Sbjct: 513 SPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARE 572
Query: 394 VFEEMLDRGIV 404
+ ++ R ++
Sbjct: 573 LLIKLCSRDVL 583
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 115/269 (42%), Gaps = 6/269 (2%)
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
N ++ + G+ + ERV + A G + + + L +G RAGR+ DA V M
Sbjct: 107 NRLVRDLCRRGRPDDAERV---VGACGPAATVVAYGALTDGYCRAGRLGDARRVVGGMPV 163
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
+ P+ YN +I G + + M C P++ TY L+ K R
Sbjct: 164 Q---PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQ 220
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A+E+ + M G P+ T ++ +C G A+ + + GCK S Y +L+
Sbjct: 221 AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 280
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
L + G +L EM P + + VI LC G L+ A+ ++E+ + G
Sbjct: 281 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 340
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + Y+ + N L ++ A L K+K
Sbjct: 341 NIVTYNAIINGLCEQRNVDGAMGLLSKMK 369
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 180/417 (43%), Gaps = 36/417 (8%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D NV++ +L K F +VL M K G+ P + T +I+++ G V +A+
Sbjct: 107 IKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAV 166
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
+++ +E G + D ++ V++ LC+ A M+ + NV+ Y+ V+ G
Sbjct: 167 ELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGL 226
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G V E + E+ +G P+ +T++ LI+GL GR +A + D M + G PD
Sbjct: 227 CKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDL 286
Query: 338 NA-----------------------------------YNAVISNYISVGDFDECMKYYKG 362
+ YN++I Y DE + ++
Sbjct: 287 QSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFEL 346
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M S C P++ YT LI G K + + A+ + +EM+ G P T T+ + C G
Sbjct: 347 MVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGR 406
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
P AA ++ K G +L ++L L L L+H M++S + IY
Sbjct: 407 PLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSI 466
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ G+C+ G+L A+ + KG + Y+ + N L+ A +L ++
Sbjct: 467 ILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNME 523
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 165/368 (44%), Gaps = 1/368 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DVK+Y V++ L + L M + NP++ S VMD + G V +A+ +
Sbjct: 180 DVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLC 239
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ G+K + + ++ LC A SL + M K V+ ++ + NI++ K
Sbjct: 240 LEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKE 299
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++++ + V+ ++ G PD T++ LI+ ++D+A VF+ M +GC PD AY
Sbjct: 300 GKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAY 359
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++I + + + ++ M M P++ T+T LI G + + A E+F M
Sbjct: 360 TSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHK 419
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G VP+ T L+ LC A+ ++ K L++ Y ++L + GK
Sbjct: 420 YGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNT 479
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L+L+ + G + Y +I G G L+ A ++ G P Y+
Sbjct: 480 ALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQ 539
Query: 521 KLLASNKL 528
L+A ++
Sbjct: 540 GLVAEREI 547
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 175/367 (47%), Gaps = 24/367 (6%)
Query: 151 NWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR 210
NW +PNV Y+ ++ L + + +M+ +G+ P+L T + ++
Sbjct: 211 NW---NPNVV----VYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCN 263
Query: 211 AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL--FNSMKGKVLFNVM 268
G+ +A +L + G+ D +SLN+++ LC+ + A S+ F + G+V +V
Sbjct: 264 FGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVP-DVF 322
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TYN +I + Q+ E RV + +V+ G PD + ++ LI G + I+ A+ + D M
Sbjct: 323 TYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEM 382
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
+ G PD + +I + VG + + M Y PN+ T ++ GL KS+ +
Sbjct: 383 IKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLL 442
Query: 389 ADALEVFEEM----LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
++AL +F M LD IV + L+ +CS G + A+ ++ G ++++ A
Sbjct: 443 SEALSLFHAMEKSNLDLNIV----IYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYA 498
Query: 445 YKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
Y ++ ++GF K G+L DL M+E+G D Y + GL ++ ++ +
Sbjct: 499 YTIM---INGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLT 555
Query: 502 ESLRKGF 508
KGF
Sbjct: 556 MMRDKGF 562
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 155/374 (41%), Gaps = 36/374 (9%)
Query: 174 GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED-FGLKFD 232
G+ K D N MAK P + ++++ ++ AI ++ + G+K D
Sbjct: 51 GKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPD 110
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
LNVV+ LC +V G+S LG ++++
Sbjct: 111 TFILNVVINSLCH------------------------LKLVAFGFSVLGTMLKL------ 140
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
G P +TF+ LI GL G + A+E+ D +++ G D Y +I+ +G
Sbjct: 141 ----GLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGK 196
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
E + + + M N PN+ Y+ ++ GL K V++AL + EM +GI P+ T T
Sbjct: 197 TSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTC 256
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
++ LC++G A + + K+G L + +L+ L GK + M G
Sbjct: 257 LIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVG 316
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
D Y +I C Q++ A V E + +G P + Y+ L + + A
Sbjct: 317 EVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAM 376
Query: 533 NLFRK-IKIARQND 545
+L + IK+ D
Sbjct: 377 HLLDEMIKVGFTPD 390
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 165/374 (44%), Gaps = 39/374 (10%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E+ WN NV + V+ + G L EA+ L + K + ++ +Y +++ L
Sbjct: 207 MEERNWNPNVVVYSTVMDGLCKDG-LVSEALGLCLEMSGK--GIKPNLVTYTCLIQGLCN 263
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ ++L +M K GV PDL++L+I++D + G++ +A ++G + G D +
Sbjct: 264 FGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFT 323
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
N ++ C + + A+ +F M + L +++ Y +I GW K+ + + +L E++
Sbjct: 324 YNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMI 383
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA--------------- 339
GF+PD +T++ LI G + GR A E+F M + G P+
Sbjct: 384 KVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLS 443
Query: 340 --------------------YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
Y+ ++ S G + ++ + + + + N+ YT +I
Sbjct: 444 EALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMI 503
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
+G K + A ++ M + G +P + T F++ L + ++ R G
Sbjct: 504 NGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFS 563
Query: 440 LSLTAYKLLLRRLS 453
+ T ++++ LS
Sbjct: 564 VDATTTEMIINYLS 577
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 179/399 (44%), Gaps = 3/399 (0%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
M+ FN +++ + D + +N+++ A G+R D + + M ++GV PD T IV+
Sbjct: 386 MLNLFN-SMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVI 444
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKV 263
+F R G++ A+ ++ GLK + + ++ C ++ A L + M +G
Sbjct: 445 AAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIP 504
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
N++ +N +I+ K G+VVE + ++ G PD +TF+ LI+G G G+I+ A
Sbjct: 505 RPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFG 564
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
V D M G PD +YN +I Y G D+ + + M S +P TY ++ GL
Sbjct: 565 VLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLF 624
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
+ A ++ EM++ G T L LC A+ M+KK + K ++
Sbjct: 625 NDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIA 684
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
++ + K +L+ + +G + Y +I L G +E A +
Sbjct: 685 IINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLM 744
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+ G PS + + + LL ++ A N K+ R
Sbjct: 745 EKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKR 783
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 182/442 (41%), Gaps = 37/442 (8%)
Query: 127 LSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVL 186
+S + V K + + S A+ L K + +V +YN ++ L R CN+
Sbjct: 191 ISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLF 250
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRA----------------------------------- 211
+M ++GV PD+ T + ++D+ +A
Sbjct: 251 HEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSIS 310
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTY 270
GQ + M + GL + + N + LC+ A+ F+SM K N++TY
Sbjct: 311 GQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTY 370
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
++++ G++ G V+M + + G D F+ +I+ G+ G +D+ + +F M+E
Sbjct: 371 SVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQE 430
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
+G PD Y VI+ + +G + M + M + +P Y LI G +
Sbjct: 431 QGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVK 490
Query: 391 ALEVFEEMLDRGIV-PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
A E+ EM+ RGI P+ S + LC G A ++ +G + + + L+
Sbjct: 491 AKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLI 550
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
GK + M +G D Y +I G C G++++ +++ E L KG
Sbjct: 551 DGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVK 610
Query: 510 PSRLVYSKLSNKLLASNKLESA 531
P+ + Y + + L + A
Sbjct: 611 PTTITYGIILHGLFNDGRTVGA 632
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 179/379 (47%), Gaps = 5/379 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVL-SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
DV ++++K L K D + N+L M + GV PD + + V+ + + +A+ +
Sbjct: 153 DVIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDL 212
Query: 221 LGRL--EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
L + + G + + N V+ L + V A +LF+ M + V+ +V+TY +I
Sbjct: 213 LHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDAL 272
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K + + E VL+++++ GF P+ +T++ +I G +G+ + +F M +G P+
Sbjct: 273 CKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNI 332
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
N+ +S+ G E +++ M++ +PN+ TY+ L+ G D L +F
Sbjct: 333 VTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNS 392
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M GIV ++ G M+++ + ++ G Y +++ S G+
Sbjct: 393 MEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGR 452
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRLVYS 516
+D +++M G +G +Y +I G C G L A ++ E + +G P+ + ++
Sbjct: 453 LADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFN 512
Query: 517 KLSNKLLASNKLESAYNLF 535
+ N L ++ A+++F
Sbjct: 513 SIINSLCKEGRVVEAHDIF 531
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 153/350 (43%), Gaps = 10/350 (2%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P + T +I+MD R + + GR GLK D +++L CL H + +
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCL---YHAKRSDDV 173
Query: 256 FNSMKGK-----VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAE--GFSPDSLTFSFL 308
N + + V + ++YN V+ + + +L +V + G SP+ +T++ +
Sbjct: 174 VNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTV 233
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I GL R G + A +F M ++G PD Y ++I D+ + M S
Sbjct: 234 IHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGF 293
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
+PN TY +I G S + + +F EM +G++P+ T S++ LC +G A
Sbjct: 294 QPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAE 353
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ G K +L Y +LL + G +L+L++ M+ +G +D ++ VI
Sbjct: 354 FFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYG 413
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G ++ +L+ + +G P Y + +L A + F ++
Sbjct: 414 KRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQM 463
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 115/279 (41%), Gaps = 3/279 (1%)
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
L V TYNI++ + + + + G D + S L++ L A R DD +
Sbjct: 116 LPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVN 175
Query: 324 VF-DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM--SSYNCEPNMDTYTRLIS 380
+ M E G PDT +YN V+ + M S C PN+ TY +I
Sbjct: 176 LLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIH 235
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
GL + +V+ A +F EM+ +G+VP T TS ++ LC A ++ ++ G +
Sbjct: 236 GLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQP 295
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+ Y ++ S G+ ++ EM G + ++ LC G+ + A
Sbjct: 296 NKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFF 355
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ KG P+ + YS L + NLF ++
Sbjct: 356 DSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSME 394
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 175/374 (46%), Gaps = 1/374 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V ++ YNV++ A + + N+LS+M + V PDL T + ++ + + G Y+A+
Sbjct: 196 VEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEAL 255
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
+ R+E G+K D + N ++ C+ + A LF ++ N +TY +I G+
Sbjct: 256 SVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDATP-NHVTYTTLIDGYC 314
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
+L + + R+ +E+ A+G P +T++ ++ L GRI DA ++ + M EK PD
Sbjct: 315 RLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNV 374
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
N +I+ Y +GD +K M + + TY LI G K R++ A E+ M
Sbjct: 375 TCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSM 434
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
LD G PS T + ++ C+ A + + + + G + + Y+ L+RR +
Sbjct: 435 LDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQV 494
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
++ MQE G D IY + +G+ A +++E ++ + +Y L
Sbjct: 495 DYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIYRAL 554
Query: 519 SNKLLASNKLESAY 532
+ N + S +
Sbjct: 555 NASYAGDNSILSLF 568
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 191/410 (46%), Gaps = 13/410 (3%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
++ K+ R LS ++++ P++ V S+ VIV A + K V M
Sbjct: 100 LLEKIAYRDFLSTQSVLSALVRLHDDPDINSHVFSWLVIVYANTKMK--QEAIQVFEHMM 157
Query: 191 KEGVNPDLETLSIVMDSFIR---AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
G P L +++++S + V+K + + R+ G++ + NV++ C+
Sbjct: 158 VNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARI---GVEANIHVYNVLIHACCKSG 214
Query: 248 HVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
V A +L + M+ K +F ++ TYN +IS + K G E V + EG PD +T++
Sbjct: 215 DVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYN 274
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
LI G + GR+ +A+ +F +++ P+ Y +I Y + D D+ ++ + M +
Sbjct: 275 SLIHGFCKEGRMREAMRLFKEIRD--ATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQ 332
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
P + TY ++ L + ++ DA ++ EM ++ I P T + + C G +A
Sbjct: 333 GLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSA 392
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ + + + G KL YK L+ + +L M ++G+ Y +++ G
Sbjct: 393 LKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDG 452
Query: 487 LCNIGQLENAVLVM-EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
CN Q E AVL + +E +RKG C + +Y L + +++ A +F
Sbjct: 453 YCN-QQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIF 501
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDT--YTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
I+ DF + + +P++++ ++ L+ ++ +A++VFE M+ G P
Sbjct: 104 IAYRDFLSTQSVLSALVRLHDDPDINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRP 163
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
T L L +YKK ++G + ++ Y +L+ G +L
Sbjct: 164 HLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLL 223
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
EM+ D Y +I+ C G A+ V + R+G P + Y+ L +
Sbjct: 224 SEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKE 283
Query: 526 NKLESAYNLFRKIKIARQN 544
++ A LF++I+ A N
Sbjct: 284 GRMREAMRLFKEIRDATPN 302
>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 620
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 165/362 (45%), Gaps = 37/362 (10%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
P VA SYN IV AL R + +V+SDM G+ P++ T + ++D+F +AG++
Sbjct: 198 PPVAA---SYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRM 254
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISG 276
A +L R+ V+ C NV+T+ ++ G
Sbjct: 255 ACAILARM-------------VITGCT---------------------PNVVTFTALVRG 280
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
G+V + + + +VAEG++P +++++ LI GL G + A + ++M++ GC P+
Sbjct: 281 LFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPN 340
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y+ +I + GD + + MS C+PN+ YT ++ K A + +
Sbjct: 341 VRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLID 400
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+ML P+T T + + LC A+ ++ + R+ GC + Y L+ L G
Sbjct: 401 KMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREG 460
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
CG L + EMQ G Y V++GLC A++ + + + +G P+ +S
Sbjct: 461 NCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFS 520
Query: 517 KL 518
+
Sbjct: 521 AI 522
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 166/349 (47%), Gaps = 20/349 (5%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+L +MA++G PD T + ++ + ++ +A ++L + A S N ++ LC
Sbjct: 158 MLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPV-----AASYNAIVLALC 212
Query: 245 QRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ + S+ + M G+ L NV+TY ++ + K G++ +L +V G +P+ +
Sbjct: 213 REFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVV 272
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
TF+ L+ GL GR+ DA++++ M +G P T +YN +I SVGD M
Sbjct: 273 TFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSM 332
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ C PN+ TY+ LI G K+ + A+ ++ +M G P+ T+ ++ C
Sbjct: 333 EQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKK--- 389
Query: 424 HAAMMMYKKARKV-------GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
+M+ +A+ + C + + L+R L + G L ++HEM+ G +
Sbjct: 390 ----LMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPN 445
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
G Y +I GL G +A+ ++ E G S + Y+ + + L +
Sbjct: 446 GRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQT 494
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 164/395 (41%), Gaps = 17/395 (4%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
P +++ V+ L D + L +M GV L + +F RAG +
Sbjct: 49 PGTGDAARAHEAAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDR 108
Query: 217 AIQMLGR-LEDFGL--KFDAESLNVV--------LWCLCQRLHVGAASSLFNSMKGK-VL 264
A++ R + D G A +L W LCQ VGAA + + M K
Sbjct: 109 ALKTFYRAVHDLGCARPHRAAALQPPHRRAAAGRTWALCQNNRVGAARKMLDEMARKGCP 168
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+ +TY ++S KL ++ E VL + P + +++ ++ L R R+ + V
Sbjct: 169 PDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIVLALCREFRMQEVFSV 223
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
M +G P+ Y ++ + G+ M C PN+ T+T L+ GL
Sbjct: 224 VSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFD 283
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+V DAL+++ M+ G PST + + LCS G A + + GC ++
Sbjct: 284 DGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRT 343
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y L+ S G G + +W++M SG + +Y ++ C A ++++ L
Sbjct: 344 YSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKML 403
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ P+ + ++ L L ++ A +F +++
Sbjct: 404 LENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMR 438
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 178/377 (47%), Gaps = 8/377 (2%)
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
N+++ +L R F C D+ +GV+PD+ + +++F + G+V +A+++ ++E+
Sbjct: 243 NILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 301
Query: 227 FGLKFDAESLNVVL--WCLCQRLHVGAASSLFNS--MKGKVLFNVMTYNIVISGWSKLGQ 282
G+ + + N V+ +C R + +F ++ + ++TY+I++ G ++ +
Sbjct: 302 AGVAPNVVTFNTVIDGLGMCGRYD---EAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 358
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ + VLKE+ +GF P+ + ++ LI+ AG ++ AIE+ D M KG ++ YN
Sbjct: 359 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 418
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I Y G D + K M S N ++T +I L AL EML R
Sbjct: 419 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 478
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
+ P G +T+ + LC +G A+ ++ + G + LL L GK
Sbjct: 479 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 538
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+ E+ G D Y +I+G C +L+ A + ++E +++G P YS L L
Sbjct: 539 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 598
Query: 523 LASNKLESAYNLFRKIK 539
NK+E A + K
Sbjct: 599 FNMNKVEEAIQFWDDCK 615
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 166/358 (46%), Gaps = 7/358 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S+ ++ L FD + +M ++P L+ ++ + G+ KA+++ +
Sbjct: 450 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 509
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
+ G D + N +L LC+ + A + + G+ + + ++YN +ISG ++
Sbjct: 510 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 569
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E L E+V G PD+ T+S LI GL ++++AI+ +D K G PD Y+ +
Sbjct: 570 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 629
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I +E +++ M S N +PN Y LI +S +++ ALE+ E+M +GI
Sbjct: 630 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 689
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P++ T TS ++ + A +++++ R G + ++ Y L + G+GK G ++
Sbjct: 690 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL---IDGYGKLGQMVK 746
Query: 464 ---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
L EM + Y +I G G + A ++ E KG P + Y +
Sbjct: 747 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 804
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 167/390 (42%), Gaps = 36/390 (9%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y+++VK L R K VL +M K+G P++ + ++DSFI AG + KAI++ +
Sbjct: 345 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 404
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------------------------- 259
GL + + N ++ C+ A L M
Sbjct: 405 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 464
Query: 260 ------KGKVLFNVMT-----YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
G++L M+ +ISG K G+ + + + + +GF D+ T + L
Sbjct: 465 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 524
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
+ GL AG++D+A + + +GC D +YN +IS DE + M
Sbjct: 525 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 584
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
+P+ TY+ LI GL KV +A++ +++ G++P T + ++ C
Sbjct: 585 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 644
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ + + + Y L+R G+ M L+L +M+ G + Y +I G+
Sbjct: 645 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 704
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
I ++E A L+ EE +G P+ Y+ L
Sbjct: 705 IISRVEEAKLLFEEMRMEGLEPNVFHYTAL 734
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 124/254 (48%), Gaps = 1/254 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D SYN ++ +K D L +M K G+ PD T SI++ +V +AIQ
Sbjct: 552 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 611
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ G+ D + +V++ C+ F+ M K V N + YN +I + +
Sbjct: 612 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 671
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ + +++ +G SP+S T++ LI+G+ R+++A +F+ M+ +G P+ Y
Sbjct: 672 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 731
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
A+I Y +G + + M S N PN TYT +I G + V +A + EM +
Sbjct: 732 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 791
Query: 401 RGIVPSTGTITSFL 414
+GIVP + T F+
Sbjct: 792 KGIVPDSITYKEFI 805
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 154/372 (41%), Gaps = 46/372 (12%)
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
+ + F R G Y A+ + L + G+ + N++L L + F+ +
Sbjct: 208 IEVYCTQFKRDG-CYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC 266
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID- 319
V +V + I+ + K G+V E ++ ++ G +P+ +TF+ +I+GLG GR D
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 326
Query: 320 ----------------------------------DAIEVFDTMKEKGCGPDTNAYNAVIS 345
DA V M +KG P+ YN +I
Sbjct: 327 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 386
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
++I G ++ ++ M S TY LI G K+ + +A + +EML G
Sbjct: 387 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 446
Query: 406 STGTITSFLEPLCSYGPPHAAM-----MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+ G+ TS + LCS+ +A+ M+ + G L+ L+ L GK
Sbjct: 447 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT-----TLISGLCKHGKHSK 501
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L+LW + G+ D ++ GLC G+L+ A + +E L +G R+ Y+ L +
Sbjct: 502 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 561
Query: 521 KLLASNKLESAY 532
KL+ A+
Sbjct: 562 GCCGKKKLDEAF 573
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 118/234 (50%), Gaps = 18/234 (7%)
Query: 155 KHPNVAKDVKSYNVIVKALGR-------RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
K + DV +Y+V++ + ++FFD +M + V P+ + ++ +
Sbjct: 615 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD-------EMMSKNVQPNTVVYNHLIRA 667
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FN 266
+ R+G++ A+++ ++ G+ ++ + ++ + V A LF M+ + L N
Sbjct: 668 YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 727
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V Y +I G+ KLGQ+V++E +L+E+ ++ P+ +T++ +I G R G + +A + +
Sbjct: 728 VFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLN 787
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
M+EKG PD+ Y I Y+ G ++ +KG N ++ + +LI
Sbjct: 788 EMREKGIVPDSITYKEFIYGYLKQGGV---LEAFKGSDEENYAAIIEGWNKLIQ 838
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 178/377 (47%), Gaps = 8/377 (2%)
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
N+++ +L R F C D+ +GV+PD+ + +++F + G+V +A+++ ++E+
Sbjct: 230 NILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 288
Query: 227 FGLKFDAESLNVVL--WCLCQRLHVGAASSLFNS--MKGKVLFNVMTYNIVISGWSKLGQ 282
G+ + + N V+ +C R + +F ++ + ++TY+I++ G ++ +
Sbjct: 289 AGVAPNVVTFNTVIDGLGMCGRYD---EAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ + VLKE+ +GF P+ + ++ LI+ AG ++ AIE+ D M KG ++ YN
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I Y G D + K M S N ++T +I L AL EML R
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
+ P G +T+ + LC +G A+ ++ + G + LL L GK
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+ E+ G D Y +I+G C +L+ A + ++E +++G P YS L L
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 523 LASNKLESAYNLFRKIK 539
NK+E A + K
Sbjct: 586 FNMNKVEEAIQFWDDCK 602
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 166/358 (46%), Gaps = 7/358 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S+ ++ L FD + +M ++P L+ ++ + G+ KA+++ +
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
+ G D + N +L LC+ + A + + G+ + + ++YN +ISG ++
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E L E+V G PD+ T+S LI GL ++++AI+ +D K G PD Y+ +
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I +E +++ M S N +PN Y LI +S +++ ALE+ E+M +GI
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P++ T TS ++ + A +++++ R G + ++ Y L + G+GK G ++
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL---IDGYGKLGQMVK 733
Query: 464 ---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
L EM + Y +I G G + A ++ E KG P + Y +
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 791
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 167/390 (42%), Gaps = 36/390 (9%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y+++VK L R K VL +M K+G P++ + ++DSFI AG + KAI++ +
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------------------------- 259
GL + + N ++ C+ A L M
Sbjct: 392 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 451
Query: 260 ------KGKVLFNVMT-----YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
G++L M+ +ISG K G+ + + + + +GF D+ T + L
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
+ GL AG++D+A + + +GC D +YN +IS DE + M
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
+P+ TY+ LI GL KV +A++ +++ G++P T + ++ C
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ + + + Y L+R G+ M L+L +M+ G + Y +I G+
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
I ++E A L+ EE +G P+ Y+ L
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 124/254 (48%), Gaps = 1/254 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D SYN ++ +K D L +M K G+ PD T SI++ +V +AIQ
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ G+ D + +V++ C+ F+ M K V N + YN +I + +
Sbjct: 599 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 658
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ + +++ +G SP+S T++ LI+G+ R+++A +F+ M+ +G P+ Y
Sbjct: 659 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 718
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
A+I Y +G + + M S N PN TYT +I G + V +A + EM +
Sbjct: 719 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 778
Query: 401 RGIVPSTGTITSFL 414
+GIVP + T F+
Sbjct: 779 KGIVPDSITYKEFI 792
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 154/372 (41%), Gaps = 46/372 (12%)
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
+ + F R G Y A+ + L + G+ + N++L L + F+ +
Sbjct: 195 IEVYCTQFKRDG-CYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC 253
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID- 319
V +V + I+ + K G+V E ++ ++ G +P+ +TF+ +I+GLG GR D
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 320 ----------------------------------DAIEVFDTMKEKGCGPDTNAYNAVIS 345
DA V M +KG P+ YN +I
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
++I G ++ ++ M S TY LI G K+ + +A + +EML G
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 406 STGTITSFLEPLCSYGPPHAAM-----MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+ G+ TS + LCS+ +A+ M+ + G L+ L+ L GK
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT-----TLISGLCKHGKHSK 488
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L+LW + G+ D ++ GLC G+L+ A + +E L +G R+ Y+ L +
Sbjct: 489 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548
Query: 521 KLLASNKLESAY 532
KL+ A+
Sbjct: 549 GCCGKKKLDEAF 560
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 118/234 (50%), Gaps = 18/234 (7%)
Query: 155 KHPNVAKDVKSYNVIVKALGR-------RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
K + DV +Y+V++ + ++FFD +M + V P+ + ++ +
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD-------EMMSKNVQPNTVVYNHLIRA 654
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FN 266
+ R+G++ A+++ ++ G+ ++ + ++ + V A LF M+ + L N
Sbjct: 655 YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V Y +I G+ KLGQ+V++E +L+E+ ++ P+ +T++ +I G R G + +A + +
Sbjct: 715 VFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLN 774
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
M+EKG PD+ Y I Y+ G ++ +KG N ++ + +LI
Sbjct: 775 EMREKGIVPDSITYKEFIYGYLKQGGV---LEAFKGSDEENYAAIIEGWNKLIQ 825
>gi|255661010|gb|ACU25674.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 376
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 178/366 (48%), Gaps = 37/366 (10%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V D+ V+PD + +++ F RAG++ ++ + G + A S N+++ L
Sbjct: 12 VYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGKEGSRSVA-SFNIMMRGLF 70
Query: 245 QRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
V +S++ MK G + + +TY I++ G+ K G + + +L+ +G D+L
Sbjct: 71 DNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLHLLEIXERKGRXXDAL 130
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
+ +I GL + +++ A+ V + M + GC P+T+ YNA+I+ I ++ ++ ++ M
Sbjct: 131 AYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALINGLIGASKSEDAIRVFREM 190
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+C P + TY+ LI+GL KS + ++A ++ +EML++G+ PS T + ++ LC
Sbjct: 191 GFPHCSPTIVTYSILINGLCKSERFSEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKV 250
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE------------- 470
A+ ++ + K G K + + +L+ L K L L+ +M
Sbjct: 251 EMALQLWNQVTKKGFKPDVQMHNILIHGLCSVAKTQHALSLYLDMNRWNCSPNLVTHNTL 310
Query: 471 -SGYPSDGEI---------------------YEYVIAGLCNIGQLENAVLVMEESLRKGF 508
G+ DG+I Y + GLC+ ++ +A+L + +++RK
Sbjct: 311 MEGFYKDGDIRNALVMWARILKNELQPDIISYNITLKGLCSCNRISDAILFLHDAVRKKI 370
Query: 509 CPSRLV 514
P+++
Sbjct: 371 FPTKIT 376
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 133/273 (48%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V ++NI++ G G+V E+ + + + G+ DS+T+ L+ G + G I+ ++ +
Sbjct: 58 SVASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLHLL 117
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ + KG D AY +I+ ++ + GM C+PN Y LI+GL+ +
Sbjct: 118 EIXERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALINGLIGA 177
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
K DA+ VF EM P+ T + + LC A + K+ + G S+ Y
Sbjct: 178 SKSEDAIRVFREMGFPHCSPTIVTYSILINGLCKSERFSEAYDLVKEMLEKGLTPSVITY 237
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
LL++ L K M L LW+++ + G+ D +++ +I GLC++ + ++A+ + + R
Sbjct: 238 SLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVAKTQHALSLYLDMNR 297
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ + ++ L + +A ++ +I
Sbjct: 298 WNCSPNLVTHNTLMEGFYKDGDIRNALVMWARI 330
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 138/304 (45%), Gaps = 36/304 (11%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
W + ++ V S+N++++ L D + ++ M K G D T I++ F +
Sbjct: 48 WEMMGKEGSRSVASFNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKN 107
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------KGKVLF 265
G + K++ +L E G DA + ++ LC+ + A S+ N M ++
Sbjct: 108 GYINKSLHLLEIXERKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVY 167
Query: 266 N------------------------------VMTYNIVISGWSKLGQVVEMERVLKEIVA 295
N ++TY+I+I+G K + E ++KE++
Sbjct: 168 NALINGLIGASKSEDAIRVFREMGFPHCSPTIVTYSILINGLCKSERFSEAYDLVKEMLE 227
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+G +P +T+S L++GL +++ A+++++ + +KG PD +N +I SV
Sbjct: 228 KGLTPSVITYSLLMKGLCLGHKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVAKTQH 287
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+ Y M+ +NC PN+ T+ L+ G K + +AL ++ +L + P + L+
Sbjct: 288 ALSLYLDMNRWNCSPNLVTHNTLMEGFYKDGDIRNALVMWARILKNELQPDIISYNITLK 347
Query: 416 PLCS 419
LCS
Sbjct: 348 GLCS 351
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 7/261 (2%)
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + ERV K+IV SPD++ ++ ++ G RAGRI D E+++ M ++G ++
Sbjct: 4 GDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGKEG-SRSVASF 62
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N ++ G DE ++ M + TY L+ G K+ + +L + E
Sbjct: 63 NIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLHLLEIXER 122
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G + LC A+ + + GCK + Y L+ L G K
Sbjct: 123 KGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALINGLIGASKSED 182
Query: 461 LLDLWHEMQESGYPSDGE---IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+ ++ EM G+P Y +I GLC + A +++E L KG PS + YS
Sbjct: 183 AIRVFREM---GFPHCSPTIVTYSILINGLCKSERFSEAYDLVKEMLEKGLTPSVITYSL 239
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L L +K+E A L+ ++
Sbjct: 240 LMKGLCLGHKVEMALQLWNQV 260
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
P+ + + +Y++++ L + + F +++ +M ++G+ P + T S++M +V
Sbjct: 193 PHCSPTIVTYSILINGLCKSERFSEAYDLVKEMLEKGLTPSVITYSLLMKGLCLGHKVEM 252
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVIS 275
A+Q+ ++ G K D + N+++ LC A SL+ M + N++T+N ++
Sbjct: 253 ALQLWNQVTKKGFKPDVQMHNILIHGLCSVAKTQHALSLYLDMNRWNCSPNLVTHNTLME 312
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
G+ K G + + I+ PD ++++ ++GL RI DAI
Sbjct: 313 GFYKDGDIRNALVMWARILKNELQPDIISYNITLKGLCSCNRISDAI 359
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 1/224 (0%)
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
+G ID A V+ + + PD YNA+++ + G +C + ++ M ++ +
Sbjct: 3 SGDIDGAERVYKDIVDSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGKEGSR-SVAS 61
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
+ ++ GL + +V + ++E M G V + T + C G + ++ + +
Sbjct: 62 FNIMMRGLFDNGRVDEVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLHLLEIXE 121
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
+ G AY ++ L K + + + M +SG + +Y +I GL + E
Sbjct: 122 RKGRXXDALAYXPMINGLCKETKLEKAVSVLNGMIQSGCKPNTHVYNALINGLIGASKSE 181
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+A+ V E P+ + YS L N L S + AY+L +++
Sbjct: 182 DAIRVFREMGFPHCSPTIVTYSILINGLCKSERFSEAYDLVKEM 225
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 191/434 (44%), Gaps = 46/434 (10%)
Query: 142 SGEAMVLFFNWAIKHPNVAKDVK----SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
SGEA + +K +A+ VK +YN +VK + + + +L++M G+ PD
Sbjct: 357 SGEA------FRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPD 410
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+T + +++ +++ + +L ++ L A + +++ LC+ + AS +F
Sbjct: 411 TQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFE 470
Query: 258 SMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
M V N + Y +I G + G+ E R+LK + +G PD L ++ +I GL ++
Sbjct: 471 IMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSR 530
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM------------- 363
++++A + M E+G P+ Y A+I Y G+ +Y+K M
Sbjct: 531 KMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCT 590
Query: 364 ----------------SSYNC------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
S + C P++ TY+ LI GLL++ K+ A+E+ E L++
Sbjct: 591 ALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEK 650
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G+VP T S + C G A +++ + G ++ Y L+ L G+
Sbjct: 651 GLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERA 710
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+L+ + G + Y +I G C G L A + +E KG P VYS L +
Sbjct: 711 RELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDG 770
Query: 522 LLASNKLESAYNLF 535
E A +LF
Sbjct: 771 CRKEGNTEKALSLF 784
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 166/381 (43%), Gaps = 6/381 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K N+ + +I+ L R + V M GV P+ + ++ ++ G+
Sbjct: 437 MKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGR 496
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
+A+++L ++ G++ D N V+ LC+ + A M + L NV TY
Sbjct: 497 FQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGA 556
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G+ K G++ +R KE++ G +P+ + + LI+G + G +A +F M +
Sbjct: 557 LIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRS 616
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD Y+A+I + G M+ P++ TY +ISG K + A
Sbjct: 617 VHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAF 676
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
++ E M +GI P+ T + + LC G A ++ G + Y ++
Sbjct: 677 QLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGY 736
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G L+ EM G P D +Y +I G G E A+ + ES++KGF +
Sbjct: 737 CKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTS 796
Query: 513 LVYSKL-----SNKLLASNKL 528
+ + + S K++ +N+L
Sbjct: 797 SLNALMDGFCKSGKVIEANQL 817
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 161/351 (45%), Gaps = 1/351 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + V D+ T + ++++ RAG + ++L +E+ G + NVV+ LC+
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286
Query: 249 VGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
V A L M K L +V TY+I+I G+ K + E + +L+E+ ++G P + ++
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI+G R G +A V + M +G + YNA++ GD ++ M
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
+P+ TY +I G LK + + ++ EM +VP+ T + LC +G A
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDAS 466
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+++ +G K + Y L++ G+ + + M + G D Y VI GL
Sbjct: 467 RVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGL 526
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
C ++E A + E + +G P+ Y L + S +++ A F+++
Sbjct: 527 CKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEM 577
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 165/357 (46%), Gaps = 12/357 (3%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M V+PD+ T S ++ +R G++ A+++L + GL D + N ++ C++
Sbjct: 612 MLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGG 671
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+G A L M K + N++TYN +I+G K G++ + I +G + +++T++
Sbjct: 672 IGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYAT 731
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY-----KG 362
+I+G ++G + A +FD M KG PD+ Y+A+I G+ ++ + + KG
Sbjct: 732 IIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKG 791
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
+S + + L+ G KS KV +A ++ E+M+D+ + P T T ++ C G
Sbjct: 792 FASTS------SLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGF 845
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A + +K + Y LL + G+ + L+ EM DG +
Sbjct: 846 LKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSV 905
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I G + ++++ L+KG S+ V L + L + + KI+
Sbjct: 906 MIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIE 962
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 173/389 (44%), Gaps = 2/389 (0%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F+N ++ NV DV +Y ++ A R +L +M ++G +P L T ++V+
Sbjct: 223 FYNGMLE-ANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGL 281
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NV 267
RAG+V +A ++ ++ GL D + ++++ ++ A + M K L
Sbjct: 282 CRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGH 341
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+ Y +I G+ + G E RV +E++A G + T++ L++G+ + G ++ A + +
Sbjct: 342 VAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNE 401
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M G PDT YN +I Y+ + M N P T +I+GL +
Sbjct: 402 MIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGS 461
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ DA VFE M+ G+ P+ T+ ++ G A+ + K K G + + Y
Sbjct: 462 IEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNS 521
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
++ L K D EM E G + Y +I G C G+++ A +E L G
Sbjct: 522 VIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCG 581
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFR 536
P+ +V + L + A ++FR
Sbjct: 582 IAPNDVVCTALIDGYCKEGSTTEATSIFR 610
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 190/451 (42%), Gaps = 31/451 (6%)
Query: 117 EDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRR 176
E L V+ LS DVV V+ + + ++ FFNW ++ ++S++++ L
Sbjct: 55 ESLLPLVSNKLSPDVVHSVITKQVNDPKRLLDFFNWVQFQMGFSQKLQSFSILALILCNS 114
Query: 177 KFF---DFMCNVLSDMAKEGVNPDLETL---------------------------SIVMD 206
+ F D + N + M+ G + L++L +++D
Sbjct: 115 RLFSRADSVVNQMIMMSSGGYSEILDSLIKSCKEFDLNNVNGNENSNNNDRGVVFELLID 174
Query: 207 SFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLF 265
+ + G +A+ + G N +L L + + +N M + VL
Sbjct: 175 GYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLH 234
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V TY +I+ + G E +R+L E+ +G SP +T++ +I GL RAG +D+A E+
Sbjct: 235 DVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELK 294
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
M +KG D Y+ +I + E + M S +P YT LI G ++
Sbjct: 295 KLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQ 354
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+A V EEML RG+ + T + ++ +C +G A + + VG K Y
Sbjct: 355 GDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTY 414
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
++ + DL EM++S +I GLC G +E+A V E +
Sbjct: 415 NNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVS 474
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
G P+ ++Y+ L + + + A + +
Sbjct: 475 LGVKPNAVIYTTLIKGHVQEGRFQEAVRILK 505
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 176/418 (42%), Gaps = 39/418 (9%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HP DV++Y+ ++ L R +LS+ ++G+ PD+ T + ++ F + G +
Sbjct: 618 HP----DVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIG 673
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVI 274
KA Q+ + G+ + + N ++ LC+ + A LF+ + GK L N +TY +I
Sbjct: 674 KAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATII 733
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF--------- 325
G+ K G + + R+ E+ +G PDS +S LI+G + G + A+ +F
Sbjct: 734 DGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFA 793
Query: 326 -------------------------DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
+ M +K PD Y +I + G E +++
Sbjct: 794 STSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFF 853
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
M N PN TYT L+SG + + ++ +F+EM+ + I P T + ++
Sbjct: 854 VDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKE 913
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
G + + K G +S +L+ L +L + +++E G
Sbjct: 914 GDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATC 973
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++ G+++ A V++ +R + P + L N S E+A + +++
Sbjct: 974 STLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQM 1031
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 94/239 (39%), Gaps = 6/239 (2%)
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+ F LI+G + G D+A+ F K G N ++S+ + + ++Y G
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M N ++ TYT LI+ ++ + + EM ++G PS T + LC G
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK---CGMLLDLWHEMQESGYPSDGEI 479
A + K K G + Y +L + GFGK C + EM G
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSIL---IDGFGKQKRCTEAKLMLEEMFSKGLKPGHVA 343
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y +I G G A V EE L +G + Y+ L + +E A L ++
Sbjct: 344 YTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEM 402
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 175/397 (44%), Gaps = 3/397 (0%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
GEA+ LF + DV +Y ++ L + L M + P + S
Sbjct: 141 GEALQLF--DKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYS 198
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KG 261
++DS + Q+ +A+ + + G+ + + + ++ LC H A LF +M
Sbjct: 199 TIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHR 258
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
K++ + +T+N ++ K G VV+ V+ ++ PD +T++ L++G +
Sbjct: 259 KIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKT 318
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+ VFDTM KGC P +Y +I+ Y + D+ M ++ MS P+ TY LI G
Sbjct: 319 VNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHG 378
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L ++ DA+ +F EM+ G +P T + LC AM++ K
Sbjct: 379 LCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPD 438
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ Y +++ + G+ DL+ ++ G D Y +I GLC G L A +
Sbjct: 439 IHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFG 498
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
E G P+ Y+ ++ L +N+ A LF+++
Sbjct: 499 EMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEM 535
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 186/404 (46%), Gaps = 9/404 (2%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
N +A+ LF P + ++ ++ ++ R K + + ++ M G+ +
Sbjct: 33 NTIDDALSLFNRMLRMRP--PPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTY 90
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
TL+I+++SF ++ A +LG + G + + ++ LC +G A LF+ M
Sbjct: 91 TLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM 150
Query: 260 KGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
G+ +V+TY +I+G K+G R L+ + P + +S +I+ L + ++
Sbjct: 151 TGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQL 210
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
+A+ +F M KG P+ Y+++I +G + E ++ + M P+ T+ L
Sbjct: 211 TEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTL 270
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
+ L K V A V + M+ + P T S ++ C + ++ + GC
Sbjct: 271 VDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGC 330
Query: 439 KLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
S+ +Y L+ +G+ K ++ + L+ EM + G D Y +I GLC++G+L +
Sbjct: 331 VPSVISYTTLI---NGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRD 387
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
A+ + E + G P + Y L + L +++L A L + I+
Sbjct: 388 AIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIE 431
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 151/322 (46%), Gaps = 9/322 (2%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + PD T + ++D+ + G V KA ++ + LK D + N ++ C R
Sbjct: 255 MIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSE 314
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+G ++F++M K + +V++Y +I+G+ K+ + + + +E+ +G PD++T++
Sbjct: 315 MGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNT 374
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI GL GR+ DAI +F M G PD Y + E M K + N
Sbjct: 375 LIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTN 434
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
+P++ Y+ ++ G+ ++ ++ A ++F ++ +G+ P T T + LC G A
Sbjct: 435 LDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEAS 494
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++ + + GC + Y L+ R + + L+ EM G+ D ++ L
Sbjct: 495 KLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEML 554
Query: 488 CNIGQLENAVLVMEESLRKGFC 509
+ G +++S+++ C
Sbjct: 555 SDDG--------LDQSVKQILC 568
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 133/286 (46%), Gaps = 6/286 (2%)
Query: 141 LSGEAMVLFFNWAIK---HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
L E MV+ ++ + ++ DV +YN ++ R NV M ++G P
Sbjct: 274 LCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPS 333
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ + + +++ + + + KA+ + + GL D + N ++ LC + A +LF+
Sbjct: 334 VISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 393
Query: 258 SM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
M G++ +++TY I+ K ++ E +LK I PD +S +++G+ RA
Sbjct: 394 EMVVYGQIP-DLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRA 452
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
G ++ A ++F + KG PD Y +I+ G E K + M C PN TY
Sbjct: 453 GELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTY 512
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
+ G L++ + A+++F+EML RG T T +E L G
Sbjct: 513 NLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDG 558
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 163/360 (45%), Gaps = 1/360 (0%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F +++ N V Y+ I+ +L + + ++ SDM +G++P+ T S ++
Sbjct: 181 FLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLC 240
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVM 268
G +AI++ + + D + N ++ LC+ V A + + M + + +V+
Sbjct: 241 ILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVV 300
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TYN ++ G ++ + V +V +G P ++++ LI G + +D A+ +F+ M
Sbjct: 301 TYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEM 360
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
++G PDT YN +I VG + + + M Y P++ TY L L K+ ++
Sbjct: 361 SQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRL 420
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A+A+ + + + + P + ++ +C G AA ++ K G + Y ++
Sbjct: 421 AEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIM 480
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L G L+ EM E+G + Y + G + A+ + +E L +GF
Sbjct: 481 INGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGF 540
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 89/195 (45%)
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+A S ++V D+ + + M P++ +++L++ + + + + L ++++M
Sbjct: 23 HAFHSKSLNVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDS 82
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
GI +T T+ + C A + K+G + S + L+R L GK G
Sbjct: 83 FGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGE 142
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L L+ +M G+ D Y +I GLC +G A+ + ++ P+ +VYS + +
Sbjct: 143 ALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIID 202
Query: 521 KLLASNKLESAYNLF 535
L +L A +LF
Sbjct: 203 SLCKDRQLTEALSLF 217
>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 185/405 (45%), Gaps = 3/405 (0%)
Query: 128 SLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLS 187
SL+ + + +G L EA+ +F +K V + ++N +++ R DF+ +
Sbjct: 194 SLEAYIRCLCKGGLVEEAISVFGQ--LKGIGVCASIATWNSVLRGSVRAGRIDFVWELYG 251
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
+M + V D+ T+ ++ +F ++ +L R+ + G+ + N ++ C+
Sbjct: 252 EMVESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDK 311
Query: 248 HVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
G S L +SM + ++ TY V++G K G+ E RV K++ G++PD + ++
Sbjct: 312 AYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYT 371
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
+I GL R + DA +++ M +KG P+ YNA+I Y +G+ +E K Y+ M
Sbjct: 372 TMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDK 431
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
+Y +I GL K+ +A ++FEEM +GI+ + T + + C G
Sbjct: 432 GYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEG 491
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ + G + S +Y L+ +L G LW +MQ G ++++I G
Sbjct: 492 ANLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITG 551
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
C G + + LR P + + L L ++L+ A
Sbjct: 552 FCKQGCAMEGMEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDA 596
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 170/396 (42%), Gaps = 12/396 (3%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVL-SDMAKEGVNPDLETLSIVMDS 207
FF+W + D S NV+ AL CN S + NP +L +
Sbjct: 146 FFHWLSSQSGFSPDSSSCNVLFDALVEAG----ACNAAKSFLDSTNFNPKPASLEAYIRC 201
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFN 266
+ G V +AI + G+L+ G+ + N VL + + L+ M + V+ +
Sbjct: 202 LCKGGLVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVAD 261
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA---GRIDDAIE 323
V T ++ + ++ + +L+ ++ +G P + F+ LI G + GR+ D
Sbjct: 262 VHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSD--- 318
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+ +M + PD Y V++ G E + +K + P+ YT +I GL
Sbjct: 319 LLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLC 378
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
+ + + DA +++ EM+ +G +P+ T + + G A MY++ G
Sbjct: 379 RMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTV 438
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
+Y ++++ L GK DL+ EM G + Y ++ G C G++ ++ E
Sbjct: 439 SYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYEL 498
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
L +G PS Y+ L +KL +++A L+ ++
Sbjct: 499 LDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQ 534
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 178/377 (47%), Gaps = 8/377 (2%)
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
N+++ +L R F C D+ +GV+PD+ + +++F + G+V +A+++ ++E+
Sbjct: 219 NILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 277
Query: 227 FGLKFDAESLNVVL--WCLCQRLHVGAASSLFNS--MKGKVLFNVMTYNIVISGWSKLGQ 282
G+ + + N V+ +C R + +F ++ + ++TY+I++ G ++ +
Sbjct: 278 AGVAPNVVTFNTVIDGLGMCGRYD---EAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 334
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ + VLKE+ +GF P+ + ++ LI+ AG ++ AIE+ D M KG ++ YN
Sbjct: 335 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 394
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I Y G D + K M S N ++T +I L AL EML R
Sbjct: 395 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 454
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
+ P G +T+ + LC +G A+ ++ + G + LL L GK
Sbjct: 455 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 514
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+ E+ G D Y +I+G C +L+ A + ++E +++G P YS L L
Sbjct: 515 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 574
Query: 523 LASNKLESAYNLFRKIK 539
NK+E A + K
Sbjct: 575 FNMNKVEEAIQFWDDCK 591
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 166/358 (46%), Gaps = 7/358 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S+ ++ L FD + +M ++P L+ ++ + G+ KA+++ +
Sbjct: 426 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 485
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
+ G D + N +L LC+ + A + + G+ + + ++YN +ISG ++
Sbjct: 486 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 545
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E L E+V G PD+ T+S LI GL ++++AI+ +D K G PD Y+ +
Sbjct: 546 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 605
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I +E +++ M S N +PN Y LI +S +++ ALE+ E+M +GI
Sbjct: 606 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 665
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P++ T TS ++ + A +++++ R G + ++ Y L + G+GK G ++
Sbjct: 666 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL---IDGYGKLGQMVK 722
Query: 464 ---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
L EM + Y +I G G + A ++ E KG P + Y +
Sbjct: 723 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 780
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 167/390 (42%), Gaps = 36/390 (9%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y+++VK L R K VL +M K+G P++ + ++DSFI AG + KAI++ +
Sbjct: 321 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 380
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------------------------- 259
GL + + N ++ C+ A L M
Sbjct: 381 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 440
Query: 260 ------KGKVLFNVMT-----YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
G++L M+ +ISG K G+ + + + + +GF D+ T + L
Sbjct: 441 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 500
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
+ GL AG++D+A + + +GC D +YN +IS DE + M
Sbjct: 501 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 560
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
+P+ TY+ LI GL KV +A++ +++ G++P T + ++ C
Sbjct: 561 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 620
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ + + + Y L+R G+ M L+L +M+ G + Y +I G+
Sbjct: 621 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 680
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
I ++E A L+ EE +G P+ Y+ L
Sbjct: 681 IISRVEEAKLLFEEMRMEGLEPNVFHYTAL 710
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 124/254 (48%), Gaps = 1/254 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D SYN ++ +K D L +M K G+ PD T SI++ +V +AIQ
Sbjct: 528 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 587
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ G+ D + +V++ C+ F+ M K V N + YN +I + +
Sbjct: 588 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 647
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ + +++ +G SP+S T++ LI+G+ R+++A +F+ M+ +G P+ Y
Sbjct: 648 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 707
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
A+I Y +G + + M S N PN TYT +I G + V +A + EM +
Sbjct: 708 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 767
Query: 401 RGIVPSTGTITSFL 414
+GIVP + T F+
Sbjct: 768 KGIVPDSITYKEFI 781
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 154/372 (41%), Gaps = 46/372 (12%)
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
+ + F R G Y A+ + L + G+ + N++L L + F+ +
Sbjct: 184 IEVYCTQFKRDG-CYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC 242
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID- 319
V +V + I+ + K G+V E ++ ++ G +P+ +TF+ +I+GLG GR D
Sbjct: 243 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 302
Query: 320 ----------------------------------DAIEVFDTMKEKGCGPDTNAYNAVIS 345
DA V M +KG P+ YN +I
Sbjct: 303 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 362
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
++I G ++ ++ M S TY LI G K+ + +A + +EML G
Sbjct: 363 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 422
Query: 406 STGTITSFLEPLCSYGPPHAAM-----MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+ G+ TS + LCS+ +A+ M+ + G L+ L+ L GK
Sbjct: 423 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLT-----TLISGLCKHGKHSK 477
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L+LW + G+ D ++ GLC G+L+ A + +E L +G R+ Y+ L +
Sbjct: 478 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 537
Query: 521 KLLASNKLESAY 532
KL+ A+
Sbjct: 538 GCCGKKKLDEAF 549
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 118/234 (50%), Gaps = 18/234 (7%)
Query: 155 KHPNVAKDVKSYNVIVKALGR-------RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
K + DV +Y+V++ + ++FFD +M + V P+ + ++ +
Sbjct: 591 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD-------EMMSKNVQPNTVVYNHLIRA 643
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FN 266
+ R+G++ A+++ ++ G+ ++ + ++ + V A LF M+ + L N
Sbjct: 644 YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 703
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V Y +I G+ KLGQ+V++E +L+E+ ++ P+ +T++ +I G R G + +A + +
Sbjct: 704 VFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLN 763
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
M+EKG PD+ Y I Y+ G ++ +KG N ++ + +LI
Sbjct: 764 EMREKGIVPDSITYKEFIYGYLKQGGV---LEAFKGSDEENYAAIIEGWNKLIQ 814
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 161/317 (50%), Gaps = 1/317 (0%)
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
+G D + + +++ + G+ A+++L +ED + + N ++ LC+ V
Sbjct: 109 QGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNE 168
Query: 252 ASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A L++ M + +F NV+TY+ +I G+ GQ++E +L E++ + +P+ T++ L++
Sbjct: 169 AYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMD 228
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
L + G++ +A + M ++G P+ +YN ++ Y +G+ + + M P
Sbjct: 229 ALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNP 288
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
N+ +Y +I L KS++V +A+ + E+L + +VP+T T +S ++ C G +A+ +
Sbjct: 289 NVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLL 348
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
K+ G + Y LL L L+ +M+E G + Y +I GLC
Sbjct: 349 KEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKG 408
Query: 491 GQLENAVLVMEESLRKG 507
G+ +NA + + L KG
Sbjct: 409 GRHKNAQKLFQHLLVKG 425
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 180/354 (50%), Gaps = 11/354 (3%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV YN I+ L + K + ++ S+M G+ P++ T S ++ F AGQ+ +
Sbjct: 148 PNVV----MYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLME 203
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVIS 275
A +L + + + + +++ LC+ V A +L M K V NV++YN ++
Sbjct: 204 AFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMD 263
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G+ +G+V +++ +V +G +P+ +++ +I+ L ++ R+D+A+ + + K P
Sbjct: 264 GYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVP 323
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+T Y+++I + +G + K M ++ TYT L+ L K++ + A +F
Sbjct: 324 NTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALF 383
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
+M +RGI P+ T T+ ++ LC G A +++ GC++++ Y ++ +SG
Sbjct: 384 MKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVM---ISGL 440
Query: 456 GKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
K GML L + +M+E+G D +E +I L Q + A ++ E + K
Sbjct: 441 CKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAK 494
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 181/378 (47%), Gaps = 1/378 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ +N IV +L + K + ++ M +G+ PDL TL+I+++ F GQ+ + +LG
Sbjct: 10 IMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLG 69
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLG 281
++ G + + +LN ++ LC + V + + + + + ++Y +++G K+G
Sbjct: 70 KILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIG 129
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ ++L+ I P+ + ++ +I+GL + +++A +++ M +G P+ Y+
Sbjct: 130 ETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYS 189
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I + G E M N PN+ TYT L+ L K KV +A + M
Sbjct: 190 TLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKE 249
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G+ P+ + + ++ C G A M+ + G ++ +Y +++ RL +
Sbjct: 250 GVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEA 309
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
++L E+ + Y +I G C +G++ +A+ +++E +G + Y+ L +
Sbjct: 310 MNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDA 369
Query: 522 LLASNKLESAYNLFRKIK 539
L + L+ A LF K+K
Sbjct: 370 LCKNQNLDKATALFMKMK 387
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 164/348 (47%), Gaps = 9/348 (2%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P + + ++ S ++ AI + +++ G++ D +LN+++ C C H+G +
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFC---HLGQMTFS 64
Query: 256 FNSMKGKVLF-----NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
F + GK+L N +T N ++ G G+V + ++VA+GF D ++++ L+
Sbjct: 65 FTVL-GKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLN 123
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
GL + G A+++ ++++ P+ YN +I +E Y M + P
Sbjct: 124 GLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFP 183
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
N+ TY+ LI G + ++ +A + EM+ + I P+ T T ++ LC G A +
Sbjct: 184 NVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLL 243
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
K G K ++ +Y L+ G+ ++H M + G + Y +I LC
Sbjct: 244 AVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKS 303
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+++ A+ ++ E L K P+ + YS L + ++ SA +L +++
Sbjct: 304 KRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEM 351
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 128/283 (45%), Gaps = 36/283 (12%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N+ +V +Y +++ AL + N+L+ M KEGV P++ + + +MD + G+V A
Sbjct: 215 NINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNA 274
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
QM + G+ + S N+++ LC+ V A +L + K ++ N +TY+ +I G
Sbjct: 275 KQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDG 334
Query: 277 WSKLGQVVEMERVLKEIV-----------------------------------AEGFSPD 301
+ KLG++ +LKE+ G P+
Sbjct: 335 FCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPN 394
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
T++ LI+GL + GR +A ++F + KGC + YN +IS G DE +
Sbjct: 395 KYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKS 454
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
M C P+ T+ +I L + + A ++ EM+ + ++
Sbjct: 455 KMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLL 497
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 89/210 (42%)
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P +N ++ + + + + + +K M EP++ T LI+ ++ + V
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
++L G P+T T+ + ++ LC G ++ + K G ++ +Y LL L
Sbjct: 68 LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G+ L L +++ + +Y +I GLC + A + E +G P+ +
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187
Query: 515 YSKLSNKLLASNKLESAYNLFRKIKIARQN 544
YS L + +L A+ L ++ + N
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNIN 217
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 195/420 (46%), Gaps = 5/420 (1%)
Query: 123 VNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFM 182
V + L + +++ + +A+ +F+ IK +YN ++ L ++ +
Sbjct: 152 VVTPMELSDIIRMLGNAKMISKAVAIFYQ--IKARKCQPTAHAYNSMIIMLMHEGEYEKV 209
Query: 183 CNVLSDMAKEG-VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLW 241
+ ++M+ EG PD T S ++ +F + G+ AI +L ++D G++ A+ +++
Sbjct: 210 HELYNEMSNEGQCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMA 269
Query: 242 CLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
L + +V A LF M+ + +V TY +I G K G++ E E+ EG P
Sbjct: 270 LLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRP 329
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN-YISVGDFDECMKY 359
D++ + +I LG+AGR+DDAI++F+ M+ C P YN +I + S E +
Sbjct: 330 DTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSW 389
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
++ M P+ TY+ LI G K+ + A+ + EEM ++G P S ++ L
Sbjct: 390 FERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGK 449
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
A ++++ ++ S Y ++++ L G+ +DL+ EM G +
Sbjct: 450 AKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYA 509
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y +++GL G L+ A+ M G P Y+ + N L + + A + +K
Sbjct: 510 YNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMK 569
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 153/341 (44%), Gaps = 2/341 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++H DV +Y +++ LG+ D N +M +EG PD ++ +++ +AG+
Sbjct: 287 MRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGR 346
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ-RLHVGAASSLFNSMKGK-VLFNVMTYN 271
+ AI++ +E + N ++ L + + V SS F MKG + + TY+
Sbjct: 347 LDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYS 406
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
I+I G+ K + + +L+E+ +GF P + LI+ LG+A R D A E+F +KE
Sbjct: 407 ILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKEN 466
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
Y +I + G D+ + + M+ C PN+ Y L+SGL ++ + +A
Sbjct: 467 CGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEA 526
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
L M D G +P + L L G P AM M ++ K +Y +L
Sbjct: 527 LTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGA 586
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
LS G L EM G+ D Y ++ + + Q
Sbjct: 587 LSHAGMFEEAAKLMKEMNAIGFDYDLITYSSILEAIGKVDQ 627
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 184/433 (42%), Gaps = 45/433 (10%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FF WA + N D +Y +++ L + + M ++ +M + NP + +
Sbjct: 105 FFRWAARKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVR---NPVCVVTPMELSDI 161
Query: 209 IR----AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGK 262
IR A + KA+ + +++ + A + N ++ L L+N M +G+
Sbjct: 162 IRMLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQ 221
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ +TY+ +IS + KLG+ +L E+ G P + ++ L+ L + + A+
Sbjct: 222 CFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGAL 281
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+F+ M+ + C PD Y +I G DE ++ M C P+ +I+ L
Sbjct: 282 GLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFL 341
Query: 383 LKSRKVADALEVFEEM--------------------------------LDR----GIVPS 406
K+ ++ DA+++FEEM +R GI PS
Sbjct: 342 GKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPS 401
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
T + ++ C AMM+ ++ + G AY L+ L + + +L+
Sbjct: 402 PFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQ 461
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
E++E+ S +Y +I L G+L++AV + +E R G P+ Y+ L + L +
Sbjct: 462 ELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAG 521
Query: 527 KLESAYNLFRKIK 539
L+ A R+++
Sbjct: 522 MLDEALTTMRRMQ 534
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 118/276 (42%), Gaps = 37/276 (13%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSP-DSLTFSFLIEGLGRAGRIDDAIEVFDT 327
TY +I + Q EM ++++E+V + S +I LG A I A+ +F
Sbjct: 121 TYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQ 180
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY-NCEPNMDTYTRLISGLLKSR 386
+K + C P +AYN++I + G++++ + Y MS+ C P+ TY+ LIS K
Sbjct: 181 IKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLG 240
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+ A+ + EM D G+ P+ T + L H A+ ++++ R C+ + Y
Sbjct: 241 RQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYT 300
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+R GL G+L+ A E R+
Sbjct: 301 ELIR-----------------------------------GLGKAGRLDEAYNFFHEMRRE 325
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
G P ++ + + N L + +L+ A LF +++ R
Sbjct: 326 GCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLR 361
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 185/409 (45%), Gaps = 37/409 (9%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V + ++N++VK+L + + L +A+EG+ PD+ T + ++D++ +AG V KA
Sbjct: 380 VKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAF 439
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ + GLK D +LN VL+ LC+ A L +S + + + ++Y V++ +
Sbjct: 440 TLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAY 499
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K R+ +++ P T++ LI+GL R R+ +AI+ + EKG PD
Sbjct: 500 FKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDE 559
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I Y GD + +++ M + +P++ T L++GL K+ AL++FE
Sbjct: 560 TTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFES 619
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+++G T + ++ +C G A+ + G + Y ++L LS G+
Sbjct: 620 WVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGR 679
Query: 458 CGMLLDLWHEMQESG-----------YPSDG-------------------------EIYE 481
++ H++ +SG PS E Y
Sbjct: 680 SEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYM 739
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
+ GLC GQL+ A V++E ++KG Y L L+ K ++
Sbjct: 740 ERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQKRQT 788
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 200/472 (42%), Gaps = 48/472 (10%)
Query: 113 KGVIEDALWNVNV----DLSLDVV--GKVVN---RGNLSGEAMVLFFNWAIKHPNVAKDV 163
KG + DAL ++ LS D V ++N R + GEA L +K +A
Sbjct: 221 KGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLAR--MKRDGIAPTQ 278
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK------- 216
+YN +V A R + V+ M G PDL T +++ +AG+V +
Sbjct: 279 PTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDE 338
Query: 217 -----------------------------AIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
A+++L + D G+K + N+V+ LC+
Sbjct: 339 MERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEG 398
Query: 248 HVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
+ A + + L +V+TYN +I + K G V + ++ E+V +G D+ T +
Sbjct: 399 KLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLN 458
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
++ L + R +DA E+ + ++G PD +Y V++ Y + + ++ + M
Sbjct: 459 TVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIER 518
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
P++ TY LI GL + ++ +A++ E +++G+VP T + C G A
Sbjct: 519 KLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENA 578
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ K + K + L+ L GK L L+ E G D Y +I
Sbjct: 579 FRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQS 638
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+C +G ++ A+ ++ KG P Y+ + + L + + E A+N+ K+
Sbjct: 639 MCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKL 690
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 142/310 (45%), Gaps = 5/310 (1%)
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDF-GLKFDAESLNVVLWCLCQRLHVGAASSL--FNSM- 259
+ ++ R + A Q+L L G++ ++ N VL L + +SL F S+
Sbjct: 141 ALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLI 200
Query: 260 KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
+ ++ N T+N+++ G + + L + G SPD++T++ L+ R G +
Sbjct: 201 ELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLG 260
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
+A + MK G P YN ++S + +G + K + M++Y EP++ TY L
Sbjct: 261 EARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLA 320
Query: 380 SGLLKSRKVADALEVFEEMLDRGI-VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
GL ++ KV +A + +EM G +P T + ++ + A+ + ++ R G
Sbjct: 321 MGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGV 380
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
K +L + ++++ L GK L ++ E G D Y +I C G + A
Sbjct: 381 KPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFT 440
Query: 499 VMEESLRKGF 508
+M+E + KG
Sbjct: 441 LMDEMVGKGL 450
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 116/292 (39%), Gaps = 5/292 (1%)
Query: 252 ASSLFNSMKGK--VLFNVMTYNIVISGWSKLGQVVEMER--VLKEIVAEGFSPDSLTFSF 307
A+ L +S++ + V ++ N V+S S+ + V + ++ P+ TF+
Sbjct: 154 AAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNL 213
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
L+ G + DA+ TM+ G PD YN +++ + G E M
Sbjct: 214 LVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDG 273
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
P TY L+S + + A +V E M G P T LC G A
Sbjct: 274 IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAF 333
Query: 428 MMYKKARKVGCKLS-LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ + ++G L + Y L+ + L L EM++ G + V+
Sbjct: 334 RLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKS 393
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
LC G+LE A+ +E+ +G P + Y+ L + + + A+ L ++
Sbjct: 394 LCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445
>gi|357142282|ref|XP_003572519.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 706
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 189/428 (44%), Gaps = 42/428 (9%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ LF K D+ SYN ++K L R + ++ ++++M ++ +PD T +
Sbjct: 278 EALHLFSCMPCK-----PDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNT 332
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
V+ G V A++++ ++ +G K D + + ++ ++ V A L SM
Sbjct: 333 VISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALELLRSMPCSP 392
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
N + Y V+ G + GQ ++ +++ E+V +PD + F +I+ L + G +D +E
Sbjct: 393 --NTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLE 450
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
V + GC PD Y ++++ + G D+ +K +K M+ C+PN TY ++ GL
Sbjct: 451 VLQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFKSMT---CKPNTVTYNYVLMGLC 507
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
K DA ++ +EM+ + P+ T + + LC G A+ +++K + GC ++
Sbjct: 508 KVELWEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVI 567
Query: 444 AYKLLLRRLSGFGKCGMLL-------------------------DLWH-------EMQES 471
Y L LS G L +LW EM
Sbjct: 568 IYSTLNNGLSEKGCVDNALKLLNNMSCKADTICYSSALKGLCRAELWEDAGELIVEMFRK 627
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
P D + +I LC G +E A V + L+ P+ ++YS L N LE A
Sbjct: 628 DCPPDEVTFSIIITNLCQQGFVEYATEVSDLMLKYECTPNIVIYSSLINGFSEHGHLEDA 687
Query: 532 YNLFRKIK 539
L R +
Sbjct: 688 LKLLRSMP 695
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 179/381 (46%), Gaps = 8/381 (2%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A + +YN ++K L K + ++ +M + PD T +++ SF ++G V +A+
Sbjct: 187 APNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDRAMG 246
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSK 279
+L R+ G A N ++ C + V A LF+ M K ++ +YN V+ G +
Sbjct: 247 ILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCMPCKP--DIFSYNAVLKGLCR 304
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
+ + ++ E+V + SPD +TF+ +I L G +D A+EV D M + G PD
Sbjct: 305 AERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFT 364
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y+A+I+ + G ++ ++ + M C PN Y ++ GL + + D ++ EM+
Sbjct: 365 YSALINAFSEQGCVEDALELLRSMP---CSPNTVCYKSVLKGLCRDGQWEDVGQLIGEMV 421
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
P ++ LC G + + ++ GC + Y LL + +G+
Sbjct: 422 RNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFAEYGRVD 481
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
L L+ M + Y YV+ GLC + E+A +++E + + P+ + +S L
Sbjct: 482 DSLKLFKSMTCK---PNTVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEMTFSILI 538
Query: 520 NKLLASNKLESAYNLFRKIKI 540
+ L +E A ++F K+++
Sbjct: 539 SSLCQKGLVECAIDVFEKMQM 559
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 156/376 (41%), Gaps = 42/376 (11%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P + ++++ AG++ A +L E DA N ++ C+ + A +
Sbjct: 91 PAVVPCTLLIKKLCAAGRLADAEGVLRASE----AADAVDHNTLVAGYCRAGRLADAERM 146
Query: 256 FNSMKGKVLFNVMTYNIVISGWSKLG--------------------------------QV 283
S+ +V+TYN +I+G+ + G Q
Sbjct: 147 LRSLAASGAADVVTYNTLIAGYCRGGRLEDARLLVASMPPAPNSYAYNTLLKGLCSAKQW 206
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ E +++E+ PD LTF LI ++G +D A+ + D M + GC P YN +
Sbjct: 207 GDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEI 266
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS + +G E + + M C+P++ +Y ++ GL ++ + DA E+ EM+ +
Sbjct: 267 ISCFAELGRVKEALHLFSCMP---CKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDC 323
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P T + + LC G A+ + + K G K Y L+ S G L+
Sbjct: 324 SPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALE 383
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L M S + Y+ V+ GLC GQ E+ ++ E +R P +V+ + + L
Sbjct: 384 LLRSMPCS---PNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLC 440
Query: 524 ASNKLESAYNLFRKIK 539
++ + +++
Sbjct: 441 QRGLVDCGLEVLQEVP 456
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 53/277 (19%), Positives = 107/277 (38%), Gaps = 47/277 (16%)
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+++ L+ + + P + + LI+ L AGR+ DA V + D +N ++
Sbjct: 76 DLDAALQLVGSMSEPPAVVPCTLLIKKLCAAGRLADAEGVLRASEAA----DAVDHNTLV 131
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ Y G + + + +++ ++ TY LI+G + ++ DA + M
Sbjct: 132 AGYCRAGRLADAERMLRSLAASG-AADVVTYNTLIAGYCRGGRLEDARLLVASM------ 184
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
PP + AY LL+ L + G +L
Sbjct: 185 -----------------PPAP---------------NSYAYNTLLKGLCSAKQWGDAEEL 212
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
EM + P D + +I C G ++ A+ +++ + G P +VY+++ +
Sbjct: 213 VEEMTRNDSPPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAE 272
Query: 525 SNKLESAYNLFR----KIKIARQNDYARRLWRSKGWH 557
+++ A +LF K I N + L R++ W
Sbjct: 273 LGRVKEALHLFSCMPCKPDIFSYNAVLKGLCRAERWE 309
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 186/417 (44%), Gaps = 36/417 (8%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D + N+++ + F +V + + K+G +PD T +I++ G+V+KA+
Sbjct: 89 IKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKAL 148
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF------------- 265
++ G + D S ++ LC+ AA L + GK++
Sbjct: 149 YFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSM 208
Query: 266 -----------------------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
+V+TY+ +ISG+ +G++ + ++++ +P+
Sbjct: 209 CKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNV 268
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
TFS LI+G + G++ +A V M +K D YN+++ Y V ++ +
Sbjct: 269 YTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNV 328
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M+ P++ +Y+ +I+G K + V +A+++FEEM + I P+ T S ++ LC G
Sbjct: 329 MAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGR 388
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A+ + + G ++ Y +L + + L +++E G D Y
Sbjct: 389 TSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTV 448
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I GLC +G+L++A V E+ L KG+ P+ Y+ L N + + K+K
Sbjct: 449 LINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMK 505
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 190/404 (47%), Gaps = 3/404 (0%)
Query: 141 LSGEAM-VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
L GE L+F+ + D SY ++ L R +L + + V P++
Sbjct: 140 LKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVV 199
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
S ++DS + V A + + + D + + ++ C + A LFN M
Sbjct: 200 MYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRM 259
Query: 260 -KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+ NV T++I+I G+ K G+V E + VL ++ + D +T++ L++G ++
Sbjct: 260 ISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQV 319
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
+ A +F+ M ++G PD +Y+ +I+ + + DE MK ++ M PN+ TY L
Sbjct: 320 NKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSL 379
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
+ GL KS + + ALE+ +EM DRG + T S L+ +C A+++ K ++ G
Sbjct: 380 VDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGI 439
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ + Y +L+ L G+ ++ ++ GY + Y +I G CN G + +
Sbjct: 440 QPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLA 499
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
++ + G P+ + Y L + L ++ + A L R++ IAR
Sbjct: 500 MLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREM-IAR 542
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 150/332 (45%), Gaps = 1/332 (0%)
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++ S ++A Q A+ + ++E G+K D + N+++ C Q H+ + S+F + K
Sbjct: 64 ILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKG 123
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ +T+ I+I G G+V + ++VA+GF D +++ LI GL R G A+
Sbjct: 124 YHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAV 183
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
++ + K P+ Y+ +I + ++ Y M S P++ TY+ LISG
Sbjct: 184 QLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGF 243
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K+ A+++F M+ I P+ T + ++ C G A + K KL +
Sbjct: 244 CVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDV 303
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L+ + L++ M + G D Y +I G C I ++ A+ + EE
Sbjct: 304 VTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEE 363
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
K P+ + Y+ L + L S + A L
Sbjct: 364 MHCKQIFPNVVTYNSLVDGLCKSGRTSCALEL 395
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 126/248 (50%), Gaps = 1/248 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
NV DV +YN ++ K + ++ + MA+ GV PD+ + SI+++ F + V +A
Sbjct: 298 NVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEA 357
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
+++ + + + + N ++ LC+ A L + M + N++TYN ++
Sbjct: 358 MKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDA 417
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K V + +L +I +G PD T++ LI GL + GR+DDA +VF+ + KG P+
Sbjct: 418 ICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPN 477
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y ++I+ + + G FDE + M C PN TY LI L + + A ++
Sbjct: 478 IYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLR 537
Query: 397 EMLDRGIV 404
EM+ RG++
Sbjct: 538 EMIARGLL 545
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 129/283 (45%), Gaps = 4/283 (1%)
Query: 256 FNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
FN +K + +T N++++ +S+LG + V +I+ +G+ PD++TF+ LI+GL
Sbjct: 86 FNGIKP----DFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLK 141
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
G + A+ D + +G D +Y +I+ VG+ ++ + + PN+ Y
Sbjct: 142 GEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMY 201
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
+ +I + K + V DA +++ EM+ + I P T +S + C G A+ ++ +
Sbjct: 202 STIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMIS 261
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
++ + +L+ GK ++ M + D Y ++ G C + Q+
Sbjct: 262 DNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNK 321
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
A + ++G P YS + N ++ A LF ++
Sbjct: 322 AKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEM 364
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 82/204 (40%)
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P + ++ + + + + + M +P+ T L++ + + + V
Sbjct: 56 PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F ++L +G P T T ++ LC G H A+ + K G +L +Y L+ L
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G+ + L + + +Y +I +C + +A + E + K P +
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235
Query: 515 YSKLSNKLLASNKLESAYNLFRKI 538
YS L + KL+ A +LF ++
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRM 259
>gi|6721172|gb|AAF26800.1|AC016829_24 hypothetical protein [Arabidopsis thaliana]
Length = 572
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 189/421 (44%), Gaps = 4/421 (0%)
Query: 125 VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCN 184
V+LS +V K+++R + + WA +Y++ V LG+ K +D M
Sbjct: 147 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 206
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ M + + L T++ +M F AG+ +A+ + RL +FGL+ + ES+N++L LC
Sbjct: 207 FVERMRGDKL-VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLC 265
Query: 245 QRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
+ V A + +K + N T+NI I GW K +V E ++E+ GF P ++
Sbjct: 266 KEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVIS 325
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
++ +I + E+ M+ G P++ Y ++S+ + +F+E ++ M
Sbjct: 326 YTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 385
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFE-EMLDRGIVPSTGTITSFLEPLCSYGPP 423
C+P+ Y LI L ++ ++ +A VF EM + G+ +T T S + C +
Sbjct: 386 RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEE 445
Query: 424 HAAMMMYKKARKVG-CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS-DGEIYE 481
A+ + K+ C + Y+ LLR G + L EM + S D Y
Sbjct: 446 DKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYT 505
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
++I LC E A + EE + + P L ++ N ESA + +K
Sbjct: 506 FLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKTV 565
Query: 542 R 542
+
Sbjct: 566 K 566
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 187/418 (44%), Gaps = 38/418 (9%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A +V +YN+++K L R F ++L +M + + PD+ + + V+ F ++ KA+Q
Sbjct: 139 AFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQ 198
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWS 278
+ ++ G + + +++ C+ + A L MK K L +++ Y +I G+
Sbjct: 199 LANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFC 258
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
G++ + + E++ G SP ++T++ LI G + GR+ +A E+F+ M E+G P+
Sbjct: 259 DCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVY 318
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
Y +I VG E ++ M + EPN+ TY +I+ L K VADALE+ E M
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELM 378
Query: 399 LDRGIVPSTGTITSFLEPLCSYGP-PHAAMMMYKKARKVG----------------CK-- 439
R P T S L LC+ G A+ ++Y + CK
Sbjct: 379 KKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGN 438
Query: 440 ---LSLTAYKLLLRRLSG---------------FGKCGMLLDLWHEMQESGYPSDGEIYE 481
+L Y LL+ +L G ++LW ++ S + + Y
Sbjct: 439 RLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYT 498
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I G C G L A ++ + PS Y+ L + L L+ A+ LF +++
Sbjct: 499 TMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQ 556
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 162/339 (47%), Gaps = 3/339 (0%)
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
+LS +++ F++ + A +L + G F+ + N++L LC+ L G A SL M
Sbjct: 109 SLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREM 168
Query: 260 KGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+ L +V++YN VI G+ + ++ + ++ E+ G S +T+ LI+ +AG++
Sbjct: 169 RQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
D+A+ + MK KG D Y ++I + G+ D + + P TY L
Sbjct: 229 DEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I G K ++ +A E+FE M++RG+ P+ T T ++ LC G A+ + +
Sbjct: 289 IRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDE 348
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ ++ Y +++ +L L++ M++ D Y ++ GLC G L+ A
Sbjct: 349 EPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASK 408
Query: 499 VMEESLRKG--FCPSRLVYSKLSNKLLASNKLESAYNLF 535
++ L+ P + ++ L + L N+L A +++
Sbjct: 409 LLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIY 447
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 164/356 (46%), Gaps = 17/356 (4%)
Query: 165 SYNVIVKA---LGRRK----FFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+YN +++ LGR K F+FM + GV P++ T + ++D G+ +A
Sbjct: 284 TYNTLIRGFCKLGRLKEASEIFEFM-------MERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
+Q+L + + + + N+++ LC+ V A + MK + + +TYN ++ G
Sbjct: 337 LQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGG 396
Query: 277 WSKLGQVVEMERVLKEIVAEG--FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G + E ++L ++ + PD ++F+ LI GL + R+ A++++D + EK
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGA 456
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
D N ++++ + GD ++ M+ +K +S+ PN DTYT +I G K+ + A +
Sbjct: 457 GDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGL 516
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+M + PS L LC G A ++++ ++ + ++ +++
Sbjct: 517 LCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLK 576
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
G L M +G D Y +I +G L+ A+ ++ + GF P
Sbjct: 577 AGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEP 632
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 125/309 (40%), Gaps = 36/309 (11%)
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
SL+ +L C Q G A + M K FNV YNI++ G + + + +L+E+
Sbjct: 109 SLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREM 168
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
PD ++++ +I G ++ A+++ + M+ GC + +I + G
Sbjct: 169 RQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
DE M K M E ++ YT LI G ++ +F+E+L+RG P T +
Sbjct: 229 DEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
+ C G A +++ M E G
Sbjct: 289 IRGFCKLGRLKEAS-----------------------------------EIFEFMMERGV 313
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
+ Y +I GLC +G+ + A+ ++ L+K P+ + Y+ + NKL + + A
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALE 373
Query: 534 LFRKIKIAR 542
+ +K R
Sbjct: 374 IVELMKKRR 382
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 124/282 (43%), Gaps = 3/282 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG--VNPDLETLSIVMDSFIRA 211
+K D +YN ++ L + D +L M K+ +PD+ + + ++ +
Sbjct: 378 MKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKG 437
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTY 270
++++A+ + L + D + N++L + V A L+ + K++ N TY
Sbjct: 438 NRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTY 497
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
+I G+ K G + + +L ++ P ++ L+ L + G +D A +F+ M+
Sbjct: 498 TTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQR 557
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
PD ++N +I + GD GMS P++ TY++LI+ LK + +
Sbjct: 558 DDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDE 617
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
A+ F++M+D G P S L+ S G KK
Sbjct: 618 AISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKK 659
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 138/290 (47%), Gaps = 2/290 (0%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
++G + +G+L EA L + DV S+N ++ L + ++ +
Sbjct: 393 LLGGLCAKGDLD-EASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLV 451
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
++ D+ T +I+++S +++G V KA+++ ++ + + ++++ ++ C+ +
Sbjct: 452 EKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLN 511
Query: 251 AASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A L M+ ++ +V YN ++S K G + + R+ +E+ + PD ++F+ +I
Sbjct: 512 VAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMI 571
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
+G +AG I A + M G PD Y+ +I+ ++ +G DE + ++ M E
Sbjct: 572 DGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFE 631
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
P+ ++ + + E ++++D+ +V + ++ +CS
Sbjct: 632 PDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCS 681
>gi|255660918|gb|ACU25628.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 484
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 182/382 (47%), Gaps = 10/382 (2%)
Query: 136 VNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
V G+ + E + FF W + + +++ I++ LGR + +L DM K+G+
Sbjct: 18 VLHGSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLE 77
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
D + +++DS+ +AG V +++++ ++E+ G++ +S + + + +R A
Sbjct: 78 WDEDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTTKSYDTLFKVILRRGRFMMAKRY 137
Query: 256 FNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
FN M + + T+N++I G+ G+V R ++ + SPD +T++ +I G R
Sbjct: 138 FNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFDDMKSREISPDVITYNTMINGYYR 197
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
++D+A + F MK + P Y +I Y+SV D+ ++ + M Y +PN T
Sbjct: 198 VKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAIT 257
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI-TSFLEPLCSYGPPHAAMMMYKKA 433
Y+ L+ GL + K+++A V +EM+D+ I P+ +I + C G AA + K
Sbjct: 258 YSTLLPGLCNAEKMSEARSVLKEMVDKYIAPTDNSIFMRLISGQCKTGNLDAAADVLKAM 317
Query: 434 RKVGCKLSLTAYKLLLR---RLSGFGKCGMLLDLWHEMQ-----ESGYPSDGEIYEYVIA 485
++ Y +L+ + K LLD E +S + Y +I
Sbjct: 318 IRLSVPTEAGHYGVLIENFCKADQHDKAVKLLDKLIEKDIILRPQSTLHMEPSAYNPMIE 377
Query: 486 GLCNIGQLENAVLVMEESLRKG 507
LCN GQ A ++ + L+ G
Sbjct: 378 YLCNNGQTAKAEALVRQLLKLG 399
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 111/251 (44%), Gaps = 1/251 (0%)
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
+L ++ +G D + +I+ G+AG + +++++F M+E G T +Y+ + +
Sbjct: 67 ILLDMPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTTKSYDTLFKVIL 126
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTG 408
G F +Y+ M S EP T+ +I G S KV A F++M R I P
Sbjct: 127 RRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFDDMKSREISPDVI 186
Query: 409 TITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM 468
T + + A + + + + ++ Y L++ + L L EM
Sbjct: 187 TYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 469 QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS-RLVYSKLSNKLLASNK 527
+ G + Y ++ GLCN ++ A V++E + K P+ ++ +L + +
Sbjct: 247 KGYGIKPNAITYSTLLPGLCNAEKMSEARSVLKEMVDKYIAPTDNSIFMRLISGQCKTGN 306
Query: 528 LESAYNLFRKI 538
L++A ++ + +
Sbjct: 307 LDAAADVLKAM 317
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 33/176 (18%), Positives = 72/176 (40%), Gaps = 8/176 (4%)
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL--------EDFGLK 230
D +VL M + V + +++++F +A Q KA+++L +L L
Sbjct: 307 LDAAADVLKAMIRLSVPTEAGHYGVLIENFCKADQHDKAVKLLDKLIEKDIILRPQSTLH 366
Query: 231 FDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVL 290
+ + N ++ LC A +L + + + N ++ G S+ G +L
Sbjct: 367 MEPSAYNPMIEYLCNNGQTAKAEALVRQLLKLGVQDPTALNTLVRGHSQEGSPDSAFELL 426
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
K ++ + + L++ + DA D+M E PD++ + +V+ +
Sbjct: 427 KIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKXALDSMIENDHLPDSSLFRSVMES 482
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 184/383 (48%), Gaps = 3/383 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+V+ ++++YN+++K +++ + ++L M + + PD+ + +++ ++ G + A
Sbjct: 146 DVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGA 205
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVIS 275
+++ + G+ D N+++ + ++ + V NV+TYNI+I+
Sbjct: 206 LKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMIN 265
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G K G+ E + + + D T+S LI GL AG ID A+ V+ + E
Sbjct: 266 GLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVV 325
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D +NA+++ + G E + + M NC+ + +Y LI GL ++ KV +A+ ++
Sbjct: 326 DAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIW 384
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
E + +G P + T + LC G + A+ ++K+A KL AY ++ L
Sbjct: 385 ELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKE 444
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
G+ + + ++M + GY D + +I G +LE+A+ E KG P+ + Y
Sbjct: 445 GRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSY 504
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
+ L L + + AY+ +++
Sbjct: 505 NTLIKGLCKAERFSEAYSFVKEM 527
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 182/390 (46%), Gaps = 10/390 (2%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K +V +V +YN+++ L + FD + M K D+ T S ++ AG
Sbjct: 248 VKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGN 307
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
+ A+++ + + L DA + N +L C+ + + L+ M + V++YNI+
Sbjct: 308 IDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNIL 367
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
I G + G+V E + + + +G P+S T+ LI GL + GR++ A+++F KE
Sbjct: 368 IKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIF---KEAED 424
Query: 334 GP---DTNAYNAVISNYISVGDFDECMKYYKGMS--SYNCEPNMDTYTRLISGLLKSRKV 388
GP D AY++++ G DE + M Y +P++ LI+G +++ K+
Sbjct: 425 GPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHV--CNPLINGFVRASKL 482
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
DA+ F EM +G P+ + + ++ LC A K+ + K + LL
Sbjct: 483 EDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLL 542
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L K M L+LW + + G+ D +Y ++ GLC++ +LE+A+ + R
Sbjct: 543 MDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTC 602
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ + + L L E A ++ I
Sbjct: 603 VPNLVTRNTLMEGLYKVRDYEKASEIWDCI 632
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 188/446 (42%), Gaps = 47/446 (10%)
Query: 85 RIDSSRAVDEFLLPEERLRGVF-----LQKLKGKGVIEDAL--WNVNVDLSLDVVGKVVN 137
R D S + E + ER + +F + L G I+ A+ + V+ SL VV V +
Sbjct: 272 RFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSL-VVDAVTH 330
Query: 138 RGNL-----SGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKE 192
L +G+ F W + + V SYN+++K L + ++ + K+
Sbjct: 331 NAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKK 390
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
G P+ T +++ + G++ KA+++ ED K DA
Sbjct: 391 GCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDA------------------- 431
Query: 253 SSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
Y+ ++ G K G++ E ++ ++ G+ D + LI G
Sbjct: 432 ---------------YAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGF 476
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
RA +++DAI F M+ KGC P +YN +I F E + K M +P+M
Sbjct: 477 VRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDM 536
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
T + L+ GL + +K+ AL ++++ LD+G P + LCS A+ +Y
Sbjct: 537 ITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSH 596
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
++ C +L L+ L ++W + + G D Y I GLC+ +
Sbjct: 597 MKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSR 656
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKL 518
+ +A+ + ++L +G P+ + ++ L
Sbjct: 657 ISDAIEFLNDALNRGILPTAVTWNIL 682
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 166/365 (45%), Gaps = 1/365 (0%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A+++++Y ++ A LS + + G PD + + + RAG + A +
Sbjct: 69 ARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACR 128
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
+ + G A + +L LC V A S+F M+ + Y ++ G
Sbjct: 129 LFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLC 188
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
G+ E E +L + +AEGF P+ + ++ LI+G G ++ A++VF+ M GC P+
Sbjct: 189 GAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVR 248
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
Y +IS + D M + M PN+ TYT LI G ++ A + + M
Sbjct: 249 TYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSM 308
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+ G+VP+ T + ++ LC + A ++ + G K++ Y L+ L G+
Sbjct: 309 ENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRF 368
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
L + G+ D Y +I GLC +L A+LV+++ + KG PS + Y+ +
Sbjct: 369 AAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTII 428
Query: 519 SNKLL 523
++L+
Sbjct: 429 IDELV 433
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 166/369 (44%), Gaps = 5/369 (1%)
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+ N + AL R + M + S M +L T + +++++ AG + + + L
Sbjct: 42 RCLNAFLMALARHRMLADMESFASRMPAR----NLRTYTTLINAYCLAGDLPASKRHLSS 97
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQ 282
L G D+ + + C+ + A LF M + + TY ++ G G
Sbjct: 98 LLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGM 157
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V E V + A+G +PD ++ ++ GL AGR +A + +G P+ YNA
Sbjct: 158 VREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNA 217
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+I Y +VGD + + ++ M C PN+ TYT LISG KSRK+ A+ +F M+D G
Sbjct: 218 LIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAG 277
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
+VP+ T T+ ++ CS G A + + G + +L+ L + G
Sbjct: 278 LVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQ 337
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
L + + G + +Y +I GLC G+ A +M+ + +GF P YS L + L
Sbjct: 338 LLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGL 397
Query: 523 LASNKLESA 531
+L A
Sbjct: 398 CRQKELSEA 406
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 172/376 (45%), Gaps = 17/376 (4%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
+ +V++Y ++ + + D + S M G+ P++ T + ++ GQ+ A +
Sbjct: 244 SPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYR 303
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS 278
+L +E+ GL + + +V++ LC+ VG A L S+ K + N + Y +I G
Sbjct: 304 LLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLC 363
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G+ +R+++ +V++GF PD+ T+S LI+GL R + +A+ V D M EKG P
Sbjct: 364 KAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPV 423
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
Y +I + D K M + +P++ TYT + ++ DA + M
Sbjct: 424 TYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHM 483
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS----- 453
+D G+ P+ T + + + G A +K GCK + +Y +LLR L
Sbjct: 484 VDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESS 543
Query: 454 -----------GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
+ L L EM + PS+ +IY + LC + +L+ A +++ E
Sbjct: 544 NNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIE 603
Query: 503 SLRKGFCPSRLVYSKL 518
PS VY+ +
Sbjct: 604 MQSANLTPSEDVYTSI 619
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 175/395 (44%), Gaps = 12/395 (3%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKAL---GRRKFFDFMCNVLSDMAKEGVNPDLET 200
EAM +F ++ A D Y +V L GR + + +LSD EG P++
Sbjct: 160 EAMSVF--AGMQADGCAPDPHVYATMVHGLCGAGRTREAE---TLLSDAMAEGFEPNVVV 214
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM- 259
+ ++D + G + A+ + R++ G + + ++ C+ + A LF+ M
Sbjct: 215 YNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMV 274
Query: 260 KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
++ NV+TY +I G GQ+ R+L+ + G P+ T S LI+ L + R+
Sbjct: 275 DAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVG 334
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
+A + ++ +KG + Y ++I G F + + + S P+ TY+ LI
Sbjct: 335 EAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLI 394
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
GL + +++++A+ V ++M+++G+ PS T T ++ L + + K G K
Sbjct: 395 DGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIK 454
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+ Y + +R G+ + M + G + Y +I G N+G A
Sbjct: 455 PDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFST 514
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
+ + G P+ Y+ L L+ K ES+ N+
Sbjct: 515 FKHMVANGCKPNEESYTVLLRLLI---KKESSNNI 546
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/445 (20%), Positives = 184/445 (41%), Gaps = 34/445 (7%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
LQ ++ G++ + W +V + + + GEA +L + K V + V
Sbjct: 304 LLQSMENSGLVPNE-WTCSVLID------ALCKHERVGEAQLLLGSLIQKGIKVNEIV-- 354
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y ++ L + F ++ + +G PD T S ++D R ++ +A+ +L +
Sbjct: 355 YTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMM 414
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVV 284
+ G++ + +++ L + + + + + M + +V TY I + + G++
Sbjct: 415 EKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRME 474
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY---- 340
+ E ++ +V G P+ +T++ LI G G A F M GC P+ +Y
Sbjct: 475 DAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLL 534
Query: 341 ---------NAVISNYISVGDFDECMKYYKG----MSSYNCEPNMDTYTRLISGLLKSRK 387
N + +N +S+ E MKY G M +D Y ++ L + +
Sbjct: 535 RLLIKKESSNNIPANSVSIWKIAE-MKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDR 593
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A + EM + PS TS + C A+ K G L +Y+
Sbjct: 594 LDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRH 653
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN---IGQLENAVLVMEESL 504
++ L G ++ +M Y + + +I GL + + + + VMEE
Sbjct: 654 IISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEE-- 711
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLE 529
K + PS +Y++L+ K+ +N ++
Sbjct: 712 -KNYRPSDALYARLTGKITDANDIQ 735
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 99/236 (41%)
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T++ LI AG + + ++ G PD++AY + + Y G + + M
Sbjct: 74 TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
C TYT L+ GL + V +A+ VF M G P + + LC G
Sbjct: 134 PLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRT 193
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A + A G + ++ Y L+ G + +D++ M +G + Y +
Sbjct: 194 REAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTEL 253
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I+G C +L+ A+++ + G P+ + Y+ L + +L+ AY L + ++
Sbjct: 254 ISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSME 309
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%)
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
N+ TYT LI+ + + + +L G P + TSF+ C G A ++
Sbjct: 71 NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF 130
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
GC + Y LL L G G + ++ MQ G D +Y ++ GLC
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGA 190
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
G+ A ++ +++ +GF P+ +VY+ L + LE A ++F ++ +
Sbjct: 191 GRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDV 240
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 97/255 (38%), Gaps = 23/255 (9%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR-------- 210
V ++ +YN ++ + M G P+ E+ ++++ I+
Sbjct: 488 VCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIP 547
Query: 211 --AGQVYKAIQM---LGRLED---FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK 262
+ ++K +M G LE+ L + + N L LC+ + A L M+
Sbjct: 548 ANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSA 607
Query: 263 VLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
L + Y +I+ +L + E + +V G+ P ++ +I L G I A
Sbjct: 608 NLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTA 667
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+VF M K + A+ +I + G EC M N P+ Y RL
Sbjct: 668 KQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARL--- 724
Query: 382 LLKSRKVADALEVFE 396
+ K+ DA ++ E
Sbjct: 725 ---TGKITDANDIQE 736
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 157/309 (50%), Gaps = 1/309 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
++ M + G PDL T V++ + G A+ +L ++E ++ + + V+ LC
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ H A +LF M+ K V NV+TY+ +IS G+ + R+L +++ +P+ +
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
TFS LI+ + G++ A ++++ M ++ P+ Y+++I+ + + E + + M
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+C PN+ TY LI+G K+++V +E+F EM RG+V +T T T+ +
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A M++K+ VG ++ Y +LL L GK + ++ +Q S D Y +
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504
Query: 484 IAGLCNIGQ 492
I G+C G+
Sbjct: 505 IEGMCKAGK 513
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 177/395 (44%), Gaps = 36/395 (9%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF A P + ++ ++ A+ + FD + + M G++ +L T +I
Sbjct: 61 DAIGLFGVMAQSRP--FPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
+++ F R ++ A+ +LG++ G + D +LN +L C + A +L +
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVD------ 172
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
Q+VEM G+ PD++TF+ LI GL + +A+
Sbjct: 173 ------------------QMVEM----------GYKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+ D M ++GC PD Y AV++ GD D + M + E N+ Y+ +I L
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
K R DAL +F EM ++G+ P+ T +S + LC+YG A + + +L
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
+ L+ GK L+ EM + + Y +I G C + +L A ++E
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+RK P+ + Y+ L N + +++ LFR++
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 150/297 (50%), Gaps = 1/297 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y +V L +R D N+L+ M + ++ S V+DS + A+ +
Sbjct: 217 DLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 276
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+E+ G++ + + + ++ CLC AS L + M + K+ N++T++ +I + K
Sbjct: 277 TEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKK 336
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++V+ E++ +E++ P+ T+S LI G R+ +A ++ + M K C P+ Y
Sbjct: 337 GKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTY 396
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I+ + D+ M+ ++ MS N TYT LI G ++R +A VF++M+
Sbjct: 397 NTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 456
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
G+ P+ T L+ LC G AM++++ ++ + + Y +++ + GK
Sbjct: 457 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 181/395 (45%), Gaps = 1/395 (0%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+V+ F ++ ++ ++ +YN+++ R +L M K G PD+ TL+ ++
Sbjct: 96 LVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLL 155
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VL 264
+ F ++ A+ ++ ++ + G K D + ++ L A +L + M +
Sbjct: 156 NGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQ 215
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+++TY V++G K G +L ++ A + + +S +I+ L + DDA+ +
Sbjct: 216 PDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 275
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F M+ KG P+ Y+++IS + G + + + M PN+ T++ LI +K
Sbjct: 276 FTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVK 335
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
K+ A +++EEM+ R I P+ T +S + C A M + + C ++
Sbjct: 336 KGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT 395
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y L+ + ++L+ EM + G + Y +I G +NA +V ++ +
Sbjct: 396 YNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 455
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G P+ L Y+ L + L + KL A +F ++
Sbjct: 456 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 490
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 100/236 (42%), Gaps = 35/236 (14%)
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS---------SYNC 368
+DDAI +F M + P ++ ++S + FD + + + M +YN
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 369 --------------------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
EP++ T L++G +++DA+ + ++M++ G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P T T T+ + L + A+ + + + GC+ L Y ++ L G + L
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+L ++M+ + ++ IY VI LC ++A+ + E KG P+ + YS L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 86/209 (41%)
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
G + Y V+ +S + D+ + + M+ P++ +++L+S + K K +
Sbjct: 40 GKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVIS 99
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
E+M GI + T + C A+ + K K+G + + LL
Sbjct: 100 FGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFC 159
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
+ + L +M E GY D + +I GL + AV +++ +++G P +
Sbjct: 160 HGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLV 219
Query: 514 VYSKLSNKLLASNKLESAYNLFRKIKIAR 542
Y + N L + A NL K++ A+
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAK 248
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 164/352 (46%), Gaps = 1/352 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M ++G+ P +ET + ++ F++ ++ A + + + + N+++ LC+
Sbjct: 183 MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGK 242
Query: 249 VGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ A M+G NV++YN +I G+S G + R+L + +G PDS T+
Sbjct: 243 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 302
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI G+ + GR+++A +FD M E G P+ YN +I Y + GD + Y M
Sbjct: 303 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 362
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
P++ TY L+ L ++ +A ++ +EM +GI+P T + G A
Sbjct: 363 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 422
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++ + G + + Y L+ LS + DL+ ++ + G D ++ ++ G
Sbjct: 423 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGH 482
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
C G +E A ++++E RK P + ++ L K+E A L ++K
Sbjct: 483 CANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK 534
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 183/388 (47%), Gaps = 15/388 (3%)
Query: 159 VAKDVKSYNVIVKALGR-------RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
++ V ++N++V L + R+F FM + G P++ + + ++ +
Sbjct: 223 ISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGL-------GFKPNVVSYNTIIHGYSSR 275
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTY 270
G + A ++L + G++ D+ + ++ +C+ + AS LF+ M + ++ N +TY
Sbjct: 276 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 335
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
N +I G+ G + E+V +G P T++ L+ L GR+ +A ++ M++
Sbjct: 336 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 395
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
KG PD YN +I+ Y G+ + + M S EP TYT LI L + ++ +
Sbjct: 396 KGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKE 455
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A ++FE++LD+G+ P + ++ C+ G A M+ K+ + + L++
Sbjct: 456 ADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQ 515
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
GK L EM+ G D Y +I+G G +++A V +E L GF P
Sbjct: 516 GRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNP 575
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ L Y+ L L + + + A L +++
Sbjct: 576 TLLTYNALIKCLCKNQEGDLAEELLKEM 603
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 173/381 (45%), Gaps = 4/381 (1%)
Query: 114 GVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKAL 173
G +E + NV ++ +RGN+ G +L A++ + D +Y ++ +
Sbjct: 251 GFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRIL---DAMRVKGIEPDSYTYGSLISGM 307
Query: 174 GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA 233
+ + + M + G+ P+ T + ++D + G + +A + G+
Sbjct: 308 CKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSV 367
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
+ N+++ L +G A + M+ K ++ + +TYNI+I+G+S+ G + + E
Sbjct: 368 STYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNE 427
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
++++G P +T++ LI L R R+ +A ++F+ + ++G PD +NA++ + + G+
Sbjct: 428 MLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGN 487
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
+ K M + P+ T+ L+ G + KV +A + +EM RGI P + +
Sbjct: 488 VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNT 547
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
+ G A + + +G +L Y L++ L + + +L EM G
Sbjct: 548 LISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKG 607
Query: 473 YPSDGEIYEYVIAGLCNIGQL 493
D Y +I G+ N+ L
Sbjct: 608 ISPDDSTYLSLIEGMGNVDTL 628
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 130/305 (42%), Gaps = 38/305 (12%)
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVL-KEI 293
++++ C+ A F MK K ++ + T N ++S + KL ++ EM VL E+
Sbjct: 160 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRM-EMAWVLYAEM 218
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
S TF+ ++ L + G++ A E M+ G P+ +YN +I Y S G+
Sbjct: 219 FRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNI 278
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
+ + M EP+ TY LISG+ K ++ +A +F++M++ G+VP+ T +
Sbjct: 279 EGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL 338
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
++ C+ G A + K G S++ Y LL+ L G+ G D+ EM+
Sbjct: 339 IDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR---- 394
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
+KG P + Y+ L N + A++
Sbjct: 395 -------------------------------KKGIIPDAITYNILINGYSRCGNAKKAFD 423
Query: 534 LFRKI 538
L ++
Sbjct: 424 LHNEM 428
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 98/238 (41%)
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
S+ F L+ R D+A + F MKEKG P N ++S ++ + + Y
Sbjct: 157 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYA 216
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M + T+ +++ L K K+ A E M G P+ + + + S G
Sbjct: 217 EMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG 276
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
A + R G + Y L+ + G+ L+ +M E G + Y
Sbjct: 277 NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 336
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I G CN G LE A +E ++KG PS Y+ L + L ++ A ++ ++++
Sbjct: 337 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR 394
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 182/417 (43%), Gaps = 36/417 (8%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K VA + YN ++ ++ + D ++ ++M +G+ P+ T SI++DSF + G+
Sbjct: 346 VKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGK 405
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNI 272
+ A+ LG++ + G+K + ++ C+ + AA SLF+ M L NV+ Y
Sbjct: 406 LDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTS 465
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA----------- 321
+ISG+ K G++ R+ E+ +G SP++ TF+ LI GL A R+ +A
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWN 525
Query: 322 ------------------------IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
E+ D M EKG PDT Y +IS S G E
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
++ + + N ++ L+ G K ++ DAL+ EML RG+ + + +
Sbjct: 586 EFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGI 645
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
+ + + K+ G + Y ++ + G M LW M G +
Sbjct: 646 LRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNV 705
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
Y +I GLC IG ++ A L+ E L P++ Y+ + L + +E A L
Sbjct: 706 VTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL 762
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 180/386 (46%), Gaps = 1/386 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+ + + DV +Y +V L + + F+ ++++M + G P +S ++D + G
Sbjct: 276 LSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGN 335
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
+ A ++ +++ FG+ N ++ +C+ + A SLFN+M K LF N +TY+I
Sbjct: 336 IGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSI 395
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I + K G++ L ++ G +S LI G + G++ A +FD M G
Sbjct: 396 LIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANG 455
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ Y ++IS Y G+ + Y M+ PN T+T LISGL + ++A+A
Sbjct: 456 LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEAN 515
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
++F EM++ ++P+ T +E C G A + + + G Y+ L+ L
Sbjct: 516 KLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGL 575
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G+ + +++Q + + ++ G C G+L++A+ E L +G
Sbjct: 576 CSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDL 635
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKI 538
+ YS L +L S +L +++
Sbjct: 636 VCYSVLIYGILRQQDRRSIIDLLKQM 661
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 181/403 (44%), Gaps = 13/403 (3%)
Query: 122 NVNVDLSLDVVGK--VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFF 179
N + L D++ + V NR L G +V + + +++ + ++ L R + F
Sbjct: 141 NFSTTLGFDLLIQTYVQNRRELDGLVVVRL----MMDCGILPQIRTLSGVLNGLIRIRQF 196
Query: 180 DFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVV 239
++ ++ G+ PD+ + V+ S +A +++GR+E G + NV
Sbjct: 197 RMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVF 256
Query: 240 LWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
+ LC+ V A + N + K L +V TY ++ G K+ + E ++ E++ GF
Sbjct: 257 IRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGF 316
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
P S L++GL + G I A ++ + +K+ G P YNA+I++ G DE
Sbjct: 317 VPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAES 376
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
+ M PN TY+ LI K K+ AL +M + GI + +S + C
Sbjct: 377 LFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHC 436
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPS 475
G AA ++ + G K ++ Y L +SG+ K G L + L+HEM G
Sbjct: 437 KLGKLRAAKSLFDEMIANGLKPNVVIYTSL---ISGYCKEGELHNAFRLYHEMTGKGISP 493
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+ + +I+GLC+ ++ A + E + P+ + Y+ L
Sbjct: 494 NTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVL 536
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 151/352 (42%), Gaps = 1/352 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V+ M G+ P + TLS V++ IR Q A+ + + GL+ D V+ LC
Sbjct: 167 VVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLC 226
Query: 245 QRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ A + M+ +V TYN+ I G K +V E + + +G D
Sbjct: 227 ELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVG 286
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T+ L+ GL + + E+ + M E G P A + ++ G+ +
Sbjct: 287 TYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKV 346
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+ P++ Y LI+ + K K+ +A +F M +G+ P+ T + ++ C G
Sbjct: 347 KKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKL 406
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+ K +VG K ++ Y L+ GK L+ EM +G + IY +
Sbjct: 407 DVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSL 466
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
I+G C G+L NA + E KG P+ ++ L + L +N++ A LF
Sbjct: 467 ISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLF 518
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 157/351 (44%), Gaps = 2/351 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ +M + V P+ T +++++ + G +A ++L + + GL D + ++ LC
Sbjct: 517 LFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLC 576
Query: 245 QRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
V A N ++G + N M ++ ++ G+ K G++ + +E++ G + D +
Sbjct: 577 STGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLV 636
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
+S LI G+ R I++ M ++G PD Y +I G+ + M
Sbjct: 637 CYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIM 696
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
S C PN+ TYT LI+GL K + A + EML +P+ T FL+ L S G
Sbjct: 697 VSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNI 756
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+ ++ + G + Y +L+R G+ ++ M +SG D Y +
Sbjct: 757 EKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTI 815
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
I C G L+ A+ + E L +G P + Y+ L + +L A+ L
Sbjct: 816 IYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFEL 866
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 161/362 (44%), Gaps = 2/362 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
NV + +YNV+++ + +L +M ++G+ PD T ++ G+V +A
Sbjct: 525 NVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEA 584
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
+ + L+ K + + +L C+ + A M G+ V +++ Y+++I G
Sbjct: 585 REFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYG 644
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ + +LK++ +G PD++ ++ +I+ +AG + A ++D M +GC P+
Sbjct: 645 ILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPN 704
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y A+I+ +G D+ + M + N PN +TY + L + A+++ +
Sbjct: 705 VVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHD 764
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+L+ G + +T T + C G A + G +Y ++ G
Sbjct: 765 VLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRG 823
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ LW M G D Y ++I G C G+L A + ++ +R+G P+R Y+
Sbjct: 824 DLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYN 883
Query: 517 KL 518
L
Sbjct: 884 SL 885
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 163/391 (41%), Gaps = 37/391 (9%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
++ +M G+ P++ + ++ + + G+++ A ++ + G+ + + ++ L
Sbjct: 446 SLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGL 505
Query: 244 CQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C + A+ LF M + V+ N +TYN++I G K G V +L E+V +G PD+
Sbjct: 506 CHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDT 565
Query: 303 LTFSFLIEGL---GRA--------------------------------GRIDDAIEVFDT 327
T+ LI GL GR GR+DDA++
Sbjct: 566 YTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACRE 625
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M +G D Y+ +I + D + K M P+ YT +I K+
Sbjct: 626 MLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGN 685
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ A +++ M+ G +P+ T T+ + LC G A ++ ++ + Y
Sbjct: 686 LKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYAC 745
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L L+ G + L H++ G+ ++ Y +I G C +G+++ A V+ + G
Sbjct: 746 FLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSG 804
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P + YS + + L+ A L+ +
Sbjct: 805 ISPDCISYSTIIYEYCRRGDLKEAIKLWESM 835
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 125/261 (47%), Gaps = 2/261 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
VA D+ Y+V++ + R++ + ++L M +G+ PD + ++D+ +AG + A
Sbjct: 631 VAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAF 690
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+ + G + + ++ LC+ + A L M L N TY +
Sbjct: 691 GLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYL 750
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G + E L +++ EGF +++T++ LI G + GRI +A EV M + G PD
Sbjct: 751 TSEGNI-EKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDC 809
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+Y+ +I Y GD E +K ++ M + P+ Y LI G + ++ A E+ ++
Sbjct: 810 ISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDD 869
Query: 398 MLDRGIVPSTGTITSFLEPLC 418
M+ RG+ P+ T S + C
Sbjct: 870 MMRRGVKPNRATYNSLIHGTC 890
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 128/289 (44%)
Query: 250 GAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
G S +S + + ++++I + + + ++ V++ ++ G P T S ++
Sbjct: 128 GLFESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVL 187
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
GL R + A+ +FD + G PD Y AV+ + + DF + M S C+
Sbjct: 188 NGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCD 247
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
++ TY I GL K+++V +A+E+ + +G+ GT + + LC A M
Sbjct: 248 LSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEM 307
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ + G S A L+ L G G DL +++++ G +Y +I +C
Sbjct: 308 MNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCK 367
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G+L+ A + KG P+ + YS L + KL+ A + K+
Sbjct: 368 DGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKM 416
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 81/170 (47%)
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P + T + +++GL++ R+ AL +F+E++ G+ P T+ + LC A +
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ GC LS+ Y + +R L + +++ + + G +D Y ++ GLC
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + E +M E + GF PS S L + L + SA++L K+K
Sbjct: 298 VEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVK 347
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 190/396 (47%), Gaps = 3/396 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA LF +K + DV +YN ++ G+ + + ++S+M K G D+ T +
Sbjct: 217 EARALFVR--MKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNA 274
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
+++ F + G + KA G ++ G+ + +L+ + C+ V A LF M+ +
Sbjct: 275 LINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRG 334
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
++ N TY ++ G K G++ + +L E+V +G P+ +T++ +++GL + G++ A
Sbjct: 335 MMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVAD 394
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+V M+ G + Y +I + + + + M + E ++ Y LI GL
Sbjct: 395 DVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGL 454
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K +K+ +A + +M D G+ P+T T+ ++ G A+ + K G + ++
Sbjct: 455 CKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNV 514
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L+ L G + + +M+E G + ++Y +I G C IG L AV +M E
Sbjct: 515 VTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNE 574
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ KG ++VY+ L + + L+ A+ L K+
Sbjct: 575 MVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKM 610
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 167/388 (43%), Gaps = 42/388 (10%)
Query: 190 AKEGVNPDLETLSIVMDSFIR----AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
A + P L V D+ + G + A++ L R+ + + + N +L L +
Sbjct: 121 AALALGPHRSALPSVFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLAR 180
Query: 246 RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
G LF + NV T+NIVI K G++VE + + A G SPD +T+
Sbjct: 181 NRQGGLVRRLFEHLPAP---NVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTY 237
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI--------------------- 344
+ LI+G G+ G +++ + M++ GC D YNA+I
Sbjct: 238 NSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKR 297
Query: 345 ----SNYISVGDF----------DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
+N +++ F E MK + M PN TYT L+ G K+ ++ D
Sbjct: 298 LGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDD 357
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A+ + +EM+ +G+VP+ T T ++ LC G A + + G K + Y L+
Sbjct: 358 AIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIH 417
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
LDL +EM+ G D +Y +I GLC + +L+ A ++ + G P
Sbjct: 418 GHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRP 477
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ ++Y+ + + + K A L KI
Sbjct: 478 NTVIYTTIMDAFFKAGKESEAVALLHKI 505
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 177/417 (42%), Gaps = 36/417 (8%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ A DV +YN ++ + + + + +M + GV ++ TLS +D+F + G
Sbjct: 260 MRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGL 319
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
V +A+++ ++ G+ + + ++ C+ + A L + M + L NV+TY +
Sbjct: 320 VREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTV 379
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
++ G K G+V + VL + G + L ++ LI G + A+++ + MK KG
Sbjct: 380 MVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKG 439
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
D + Y +I V DE M PN YT ++ K+ K ++A+
Sbjct: 440 MELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAV 499
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+ ++ D G+ P+ T + ++ LC G + A+ + K R++G ++ Y L+
Sbjct: 500 ALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGF 559
Query: 453 SGFGKC-------------GMLLD----------------------LWHEMQESGYPSDG 477
G GM LD L +M E+G D
Sbjct: 560 CKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDL 619
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
Y I+G CN+ ++ A V+ E + G P + Y+ L K +E A +L
Sbjct: 620 YCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSL 676
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 140/322 (43%), Gaps = 15/322 (4%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H + +V +Y V+V L + +VLS M + GV + + ++
Sbjct: 367 HQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSE 426
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVI 274
+A+ +L +++ G++ D ++W LC+ + A SL + M L N + Y ++
Sbjct: 427 RALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIM 486
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+ K G+ E +L +I G P+ +T+ LI+GL +AG I +AI FD M+E G
Sbjct: 487 DAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLD 546
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ Y +I + +G + + M + YT LI G +K + A +
Sbjct: 547 PNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFAL 606
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV-------GCKLSLTAYKL 447
+M++ G+ T F+ C+ M M ++AR V G TAY
Sbjct: 607 KAKMIETGLQLDLYCYTCFISGFCN-------MNMMQEARGVLSEMIGTGITPDKTAYNC 659
Query: 448 LLRRLSGFGKCGMLLDLWHEMQ 469
L+R+ G L +EM+
Sbjct: 660 LIRKYQKLGNMEEASSLQNEME 681
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 109/241 (45%)
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
+P+ TF+ +I+ L + G + +A +F MK GC PD YN++I Y G+ +E
Sbjct: 196 APNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVEL 255
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
M C ++ TY LI+ K + A F EM G++ + T+++F++ C
Sbjct: 256 LVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFC 315
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
G AM ++ + R G + Y L+ G+ + L EM G +
Sbjct: 316 KEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVV 375
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y ++ GLC G++ A V+ R G + L+Y+ L + + E A +L ++
Sbjct: 376 TYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEM 435
Query: 539 K 539
K
Sbjct: 436 K 436
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 131/314 (41%), Gaps = 66/314 (21%)
Query: 93 DEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNW 152
D+ L ER GV +L +I N N + +LD++ ++ N+G
Sbjct: 394 DDVLSLMER-AGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKG------------- 439
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+ DV Y ++ L + + D ++L M G+ P+ + +MD+F +AG
Sbjct: 440 ------MELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAG 493
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWC-----LCQRLHVGAASSLFNSMKGKVL-FN 266
+ +A+ +L ++ D GL+ NVV +C LC+ + A S F+ M+ L N
Sbjct: 494 KESEAVALLHKIPDSGLQ-----PNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPN 548
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA----- 321
V Y +I G+ K+G + + ++ E+V +G S D + ++ LI+G + G + A
Sbjct: 549 VQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKA 608
Query: 322 --IE----------------------------VFDTMKEKGCGPDTNAYNAVISNYISVG 351
IE V M G PD AYN +I Y +G
Sbjct: 609 KMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLG 668
Query: 352 DFDECMKYYKGMSS 365
+ +E M S
Sbjct: 669 NMEEASSLQNEMES 682
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 95/238 (39%), Gaps = 16/238 (6%)
Query: 312 LGRAGRIDDAIEVFDTMKEKGC--GPDTNAYNAVISNYISV----GDFDECMKYYKGMSS 365
LG R A + D + GP +A +V +S+ G D+ ++ +
Sbjct: 102 LGAGHRPHLAASLVDILHRAALALGPHRSALPSVFDTLLSLLADHGLLDDAVRALARVRQ 161
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
PN T ++ L ++R+ +FE + P+ T ++ LC G
Sbjct: 162 LRVPPNTRTCNHILLRLARNRQGGLVRRLFEHL----PAPNVFTFNIVIDFLCKQGELVE 217
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEY 482
A ++ + + +GC + Y L+ G+GKCG L + L EM++SG +D Y
Sbjct: 218 ARALFVRMKAMGCSPDVVTYNSLI---DGYGKCGELEEVELLVSEMRKSGCAADVVTYNA 274
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+I G +E A E R G + + S + + A LF ++++
Sbjct: 275 LINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRV 332
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 164/352 (46%), Gaps = 1/352 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M ++G+ P +ET + ++ F++ ++ A + + + + N+++ LC+
Sbjct: 205 MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGK 264
Query: 249 VGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ A M+G NV++YN +I G+S G + R+L + +G PDS T+
Sbjct: 265 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 324
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI G+ + GR+++A +FD M E G P+ YN +I Y + GD + Y M
Sbjct: 325 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 384
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
P++ TY L+ L ++ +A ++ +EM +GI+P T + G A
Sbjct: 385 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 444
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++ + G + + Y L+ LS + DL+ ++ + G D ++ ++ G
Sbjct: 445 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGH 504
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
C G +E A ++++E RK P + ++ L K+E A L ++K
Sbjct: 505 CANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK 556
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 183/388 (47%), Gaps = 15/388 (3%)
Query: 159 VAKDVKSYNVIVKALGR-------RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
++ V ++N++V L + R+F FM + G P++ + + ++ +
Sbjct: 245 ISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGL-------GFKPNVVSYNTIIHGYSSR 297
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTY 270
G + A ++L + G++ D+ + ++ +C+ + AS LF+ M + ++ N +TY
Sbjct: 298 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 357
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
N +I G+ G + E+V +G P T++ L+ L GR+ +A ++ M++
Sbjct: 358 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 417
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
KG PD YN +I+ Y G+ + + M S EP TYT LI L + ++ +
Sbjct: 418 KGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKE 477
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A ++FE++LD+G+ P + ++ C+ G A M+ K+ + + L++
Sbjct: 478 ADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQ 537
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
GK L EM+ G D Y +I+G G +++A V +E L GF P
Sbjct: 538 GRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNP 597
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ L Y+ L L + + + A L +++
Sbjct: 598 TLLTYNALIKCLCKNQEGDLAEELLKEM 625
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 173/381 (45%), Gaps = 4/381 (1%)
Query: 114 GVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKAL 173
G +E + NV ++ +RGN+ G +L A++ + D +Y ++ +
Sbjct: 273 GFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRIL---DAMRVKGIEPDSYTYGSLISGM 329
Query: 174 GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA 233
+ + + M + G+ P+ T + ++D + G + +A + G+
Sbjct: 330 CKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSV 389
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
+ N+++ L +G A + M+ K ++ + +TYNI+I+G+S+ G + + E
Sbjct: 390 STYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNE 449
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
++++G P +T++ LI L R R+ +A ++F+ + ++G PD +NA++ + + G+
Sbjct: 450 MLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGN 509
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
+ K M + P+ T+ L+ G + KV +A + +EM RGI P + +
Sbjct: 510 VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNT 569
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
+ G A + + +G +L Y L++ L + + +L EM G
Sbjct: 570 LISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKG 629
Query: 473 YPSDGEIYEYVIAGLCNIGQL 493
D Y +I G+ N+ L
Sbjct: 630 ISPDDSTYLSLIEGMGNVDTL 650
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 130/305 (42%), Gaps = 38/305 (12%)
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVL-KEI 293
++++ C+ A F MK K ++ + T N ++S + KL ++ EM VL E+
Sbjct: 182 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRM-EMAWVLYAEM 240
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
S TF+ ++ L + G++ A E M+ G P+ +YN +I Y S G+
Sbjct: 241 FRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNI 300
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
+ + M EP+ TY LISG+ K ++ +A +F++M++ G+VP+ T +
Sbjct: 301 EGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL 360
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
++ C+ G A + K G S++ Y LL+ L G+ G D+ EM+
Sbjct: 361 IDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR---- 416
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
+KG P + Y+ L N + A++
Sbjct: 417 -------------------------------KKGIIPDAITYNILINGYSRCGNAKKAFD 445
Query: 534 LFRKI 538
L ++
Sbjct: 446 LHNEM 450
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 98/238 (41%)
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
S+ F L+ R D+A + F MKEKG P N ++S ++ + + Y
Sbjct: 179 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYA 238
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M + T+ +++ L K K+ A E M G P+ + + + S G
Sbjct: 239 EMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG 298
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
A + R G + Y L+ + G+ L+ +M E G + Y
Sbjct: 299 NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 358
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I G CN G LE A +E ++KG PS Y+ L + L ++ A ++ ++++
Sbjct: 359 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR 416
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 173/383 (45%), Gaps = 5/383 (1%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV Y ++ R D ++ +M GV P+ T ++ + GQ+ +
Sbjct: 220 PNVV----VYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDR 275
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVIS 275
A +L ++ + D + N+++ + + A L + M+ + NV TY+I+I
Sbjct: 276 ASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIH 335
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G + G+ + +L+E+ +G P++ ++ LI G R G + A E+FD M + P
Sbjct: 336 GLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLP 395
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D YN++I VG +E KY+ M PN TY+ LI G LK+ + A ++
Sbjct: 396 DLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLV 455
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
+ MLD G+ P+ LE +K G L Y +L+ LS
Sbjct: 456 QRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 515
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
G + E++++G D +Y +I+GLC E A +++E +KG P+ + Y
Sbjct: 516 GNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCY 575
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
+ L + L S + A N+F I
Sbjct: 576 NALIDGLCKSGDISYARNVFNSI 598
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 179/403 (44%), Gaps = 42/403 (10%)
Query: 141 LSGEAMVLFFNWAIKH----PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNP 196
L +AM L W ++ ++ DV +Y+ +++A + + FD VL +M + G
Sbjct: 93 LRADAMALL--WKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGL 150
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
+ T ++++ R+G V +A +ED+GL D + ++ LC+ A +L
Sbjct: 151 NTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL 210
Query: 257 NSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
+ M ++ NV+ Y +I G+ + G E +++KE+VA G P+ +T+ L+ GL +
Sbjct: 211 DEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKM 270
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
G++D A + M PDT YN +I + + + + M + PN+ TY
Sbjct: 271 GQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTY 330
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
+ +I GL +S + A ++ EEM +G+ P+ + C G A ++ K K
Sbjct: 331 SIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTK 390
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
V +L DL+ Y +I GL +G++E
Sbjct: 391 VN----------------------VLPDLY-------------CYNSLIFGLSKVGRVEE 415
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ + +G P+ YS L + L + LESA L +++
Sbjct: 416 STKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 458
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 168/378 (44%), Gaps = 1/378 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN+I++ R +LS+M G++P++ T SI++ ++G+ KA +L
Sbjct: 291 DTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 350
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ GLK +A ++ C+ +V A +F+ M K VL ++ YN +I G SK+
Sbjct: 351 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 410
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+V E + ++ G P+ T+S LI G + G ++ A ++ M + G P+ Y
Sbjct: 411 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 470
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++ +Y D ++ +K M + Y LI L S + A V E+
Sbjct: 471 IDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEK 530
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G VP +S + LC A + + K G ++ Y L+ L G
Sbjct: 531 NGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISY 590
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
++++ + G + Y +I G C +G + NA + E L G P VYS L+
Sbjct: 591 ARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTT 650
Query: 521 KLLASNKLESAYNLFRKI 538
++ LE A L ++
Sbjct: 651 GCSSAGDLEQAMFLIEEM 668
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 185/432 (42%), Gaps = 37/432 (8%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+++ ++ +V +Y++++ L + + ++L +M +G+ P+ + ++ + R G
Sbjct: 318 MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGN 377
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
V A ++ ++ + D N +++ L + V ++ F M+ + +L N TY+
Sbjct: 378 VSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSG 437
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSP-------------------------------- 300
+I G+ K G + E++++ ++ G P
Sbjct: 438 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 497
Query: 301 ---DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
D+ + LI L +G ++ A V +++ G PD + Y+++IS D ++
Sbjct: 498 VMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAF 557
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
MS +PN+ Y LI GL KS ++ A VF +L +G+VP+ T TS ++
Sbjct: 558 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 617
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
C G A +Y + G Y +L S G + L EM G+ S
Sbjct: 618 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS 677
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
+ ++ G C G+++ + ++ + +G P+ L + + L + KL + +F +
Sbjct: 678 S-FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVE 736
Query: 538 IKIARQNDYARR 549
++ AR
Sbjct: 737 LQQKTSESAARH 748
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 35/254 (13%)
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
+V + +V G SPD T+S LIE + D A +V M+E+GCG +T YN +I+
Sbjct: 103 KVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGL 162
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
G +E + K M Y P+ TY LI+GL KSR+ +A + +EM + P+
Sbjct: 163 CRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNV 222
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
+ ++ G A M K E
Sbjct: 223 VVYANLIDGFMREGNADEAFKMIK-----------------------------------E 247
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
M +G + Y+ ++ GLC +GQ++ A L++++ +R P + Y+ + +
Sbjct: 248 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHN 307
Query: 528 LESAYNLFRKIKIA 541
+ A+ L +++ A
Sbjct: 308 KKDAFRLLSEMENA 321
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 150/357 (42%), Gaps = 19/357 (5%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D + Y +++ L + VLS++ K G PD+ S ++ + KA
Sbjct: 498 VMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAF 557
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+L + G+ + N ++ LC+ + A ++FNS+ K L N +TY +I G
Sbjct: 558 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 617
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K+G + + E++A G +PD+ +S L G AG ++ A+ + + M +G
Sbjct: 618 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SI 676
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+++N ++ + G E +K + PN T +ISGL ++ K+++ +F E
Sbjct: 677 SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVE 736
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ + + +S + + G K+ L ++R G
Sbjct: 737 LQQKTSESAARHFSSLFMDMINQG-----------------KIPLDVVDDMIRDHCKEGN 779
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
L L + P Y ++ LC G+L A+ +++E ++G LV
Sbjct: 780 LDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLV 836
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 175/369 (47%), Gaps = 4/369 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR---AGQVY 215
V+ D+ ++N ++ L R +V D+ G+ P + T + ++D + + AG +Y
Sbjct: 187 VSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMY 246
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
+L + + G+ A + V++ C+ + AA +F MK + + +V+TYN +I
Sbjct: 247 HVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLI 306
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
SG G+V E ++++E+ G SP+ +TF +++G + G + DA + D M E+
Sbjct: 307 SGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVE 366
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN +I Y +G ++ M + M+ PN+ TY LI+G +S A +
Sbjct: 367 PDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGL 426
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+EM ++GI T + LC G A+ + + +VG + + Y +++
Sbjct: 427 LDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCD 486
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G ++ M++ ++ Y I C IG+++ A ++ E L K P+ +
Sbjct: 487 KGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGIT 546
Query: 515 YSKLSNKLL 523
Y + ++
Sbjct: 547 YETIKEGMM 555
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 160/391 (40%), Gaps = 37/391 (9%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HP S N ++ L K D + V+PD+ T + V+ R GQ+
Sbjct: 149 HPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLR 208
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVIS 275
KA + ++ +GL +V TYN +I
Sbjct: 209 KAGDVAKDIKAWGLAP----------------------------------SVATYNSLID 234
Query: 276 GWSKLGQVVEMERV---LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
G+ K G M V LKE+V G SP ++TF LI G + A+ VF+ MK++G
Sbjct: 235 GYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQG 294
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
YN++IS S G +E +K + M PN T+ ++ G K +ADA
Sbjct: 295 IAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADAN 354
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+ + M +R + P ++ G AM + + K G ++T Y L+
Sbjct: 355 DWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGF 414
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
S G L EM+E G +D Y +I LC G++ AV +++E G P+
Sbjct: 415 SRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNH 474
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
L Y+ + ++SAY + +++ R+
Sbjct: 475 LTYNTIIQGFCDKGNIKSAYEIRTRMEKCRK 505
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 118/238 (49%), Gaps = 12/238 (5%)
Query: 93 DEFLLPEERLRGVFLQKLKGKGVIEDAL-W-------NVNVDLSL-DVVGKVVNRGNLSG 143
D L P E G L+ KG++ DA W NV D+ + +++ V R
Sbjct: 327 DLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKME 386
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+AM + A+ ++ +V +YN ++ R + +L +M ++G+ D+ T ++
Sbjct: 387 DAMAV--KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNV 444
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
++ + G+V KA+++L + + GL+ + + N ++ C + ++ +A + M K +
Sbjct: 445 LIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCR 504
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
NV+TYN+ I + ++G++ E +L E++ + P+ +T+ + EG+ G D
Sbjct: 505 KRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 103/227 (45%), Gaps = 1/227 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++ ++K ++ + + M + V PD+ +I++D + R G++ A+ + +
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAM 395
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
G+ + + N ++ + +AS L + MK K + +V+TYN++I G+V
Sbjct: 396 AKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEV 455
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ ++L E+ G P+ LT++ +I+G G I A E+ M++ + YN
Sbjct: 456 RKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVF 515
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
I + +G DE M PN TY + G+++ D
Sbjct: 516 IKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 9/184 (4%)
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
G S P+ + L++GL+ +++V A + F L R + P T + + LC G
Sbjct: 146 GESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIG 205
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH------EMQESGYPS 475
A + K + G S+ Y L + G+ K G +++H EM E+G
Sbjct: 206 QLRKAGDVAKDIKAWGLAPSVATYNSL---IDGYCKKGGAGNMYHVDMLLKEMVEAGISP 262
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ +I G C AV V EE ++G S + Y+ L + L + K+E L
Sbjct: 263 TAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLM 322
Query: 536 RKIK 539
+++
Sbjct: 323 EEME 326
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 174/385 (45%), Gaps = 1/385 (0%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
W +V +++ N+++ L ++ FD M V DM G +P++ T ++D R
Sbjct: 147 WVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQ 206
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTY 270
G KA ++ + + + +++ LC + A S+F +M+ +L N+ TY
Sbjct: 207 GDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTY 266
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
N ++ G+ K+ V + + +E++ +G P+ +TF LI+GL + + A + M
Sbjct: 267 NTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS 326
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
G P+ YN +I Y G+ E + + + + P++ TY+ LI GL ++ +
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEE 386
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A + +EM +G +P+ T + ++ C G A+ + + + G + ++ + L+
Sbjct: 387 ADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID 446
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
GK + L+ EM G D Y +I G G + A + +E G P
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506
Query: 511 SRLVYSKLSNKLLASNKLESAYNLF 535
+ S L + L ++ A LF
Sbjct: 507 NVFTLSCLIDGLCKDGRISDAIKLF 531
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 166/358 (46%), Gaps = 6/358 (1%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
NVLS + P++ +++ +F G V +A+ + +++ ++ N+VL L
Sbjct: 114 NVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKMDVLPA---MQACNMVLDGL 168
Query: 244 CQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
++ ++ M + NV+TY +I G + G ++ R+ E++ + P
Sbjct: 169 VKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTV 228
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+ ++ LI GL RI +A +F TM+ G P+ YN ++ Y + + ++ Y+
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQE 288
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M PN+ T+ LI GL K+ ++ A + +M G+VP+ ++ C G
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A+ ++ + K + Y +L++ L G + L EM++ G+ + Y
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+I G C G +E A+ V + KG P+ + +S L + + K+E+A L+ ++ I
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI 466
>gi|357159762|ref|XP_003578551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Brachypodium distachyon]
Length = 534
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 205/439 (46%), Gaps = 17/439 (3%)
Query: 127 LSLDVVGKVV--NRGNLSGEAMVLFFNWAIKHPNVAKD--VKSYNVIVKALGRRKFFDFM 182
L+ V G+++ RG EA+ FFN + P++ D + Y ++ L + F
Sbjct: 97 LTFHVFGRLLALRRGIPFPEALA-FFNHVL--PSLPTDSLPELYASMMDLLAKHHHFPLA 153
Query: 183 CNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKF-DAESLNVVLW 241
++L +M K + + + ++ ++RAG +A + +E++G D L +L
Sbjct: 154 RHLLDEMRKRSIPISSQVILALIRRYVRAGMSSEASDLFRSMEEYGGGVPDPAVLASLLG 213
Query: 242 CLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
L ++ A +LF+S K +V+ Y ++ W + G + + E+V E+ G P+
Sbjct: 214 ALSKKRLASEAQALFDSYKSVFTPDVVLYTTLVHAWCRSGCLDKAEQVFAEMQQAGIMPN 273
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
T++ +I+ + RAG++ A E+ M + GC P+T +NA++ ++ G ++ ++ +
Sbjct: 274 VYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHN 333
Query: 362 GMSSYNCEPNMDTYTRLI-SGLLKSRKVAD-ALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
M C+P++ TY L+ + K + D A+++ +M+ +G P T L+ +
Sbjct: 334 QMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKLLLKMIAKGCTPDCHTFNPMLKLVVV 393
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
G AA +Y++ +++ CK ++ Y LL++ M+L + +M G +
Sbjct: 394 LGNVDAAHKLYERMQELQCKPNVITYNLLMKLFGKDKSMDMVLRIKKDMDAQGVEPNVNT 453
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLR-KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y +I C G + A + E L K P + VY + L + +L L +
Sbjct: 454 YGALIETFCGRGNWKRAYATLREMLEVKSLKPKKPVYDMVLVLLRKAGQLRKHEELVELM 513
Query: 539 K----IARQNDYARRLWRS 553
I R +D A LWR+
Sbjct: 514 ADRGFIKRPSDDA--LWRA 530
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 175/369 (47%), Gaps = 4/369 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR---AGQVY 215
V+ D+ ++N ++ L R +V D+ G+ P + T + ++D + + AG +Y
Sbjct: 187 VSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMY 246
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
+L + + G+ A + V++ C+ + AA +F MK + + +V+TYN +I
Sbjct: 247 HVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLI 306
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
SG G+V E ++++E+ G SP+ +TF +++G + G + DA + D M E+
Sbjct: 307 SGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVE 366
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN +I Y +G ++ M + M+ PN+ TY LI+G +S A +
Sbjct: 367 PDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGL 426
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+EM ++GI T + LC G A+ + + +VG + + Y +++
Sbjct: 427 LDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCD 486
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G ++ M++ ++ Y I C IG+++ A ++ E L K P+ +
Sbjct: 487 KGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGIT 546
Query: 515 YSKLSNKLL 523
Y + ++
Sbjct: 547 YETIKEGMM 555
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 160/391 (40%), Gaps = 37/391 (9%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HP S N ++ L K D + V+PD+ T + V+ R GQ+
Sbjct: 149 HPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLR 208
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVIS 275
KA + ++ +GL +V TYN +I
Sbjct: 209 KAGDVAKDIKAWGLAP----------------------------------SVATYNSLID 234
Query: 276 GWSKLGQVVEMERV---LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
G+ K G M V LKE+V G SP ++TF LI G + A+ VF+ MK++G
Sbjct: 235 GYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQG 294
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
YN++IS S G +E +K + M PN T+ ++ G K +ADA
Sbjct: 295 IAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADAN 354
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+ + M +R + P ++ G AM + + K G ++T Y L+
Sbjct: 355 DWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGF 414
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
S G L EM+E G +D Y +I LC G++ AV +++E G P+
Sbjct: 415 SRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNH 474
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
L Y+ + ++SAY + +++ R+
Sbjct: 475 LTYNTIIQGFCDKGNIKSAYEIRTRMEKCRK 505
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 118/238 (49%), Gaps = 12/238 (5%)
Query: 93 DEFLLPEERLRGVFLQKLKGKGVIEDA-LW-------NVNVDLSL-DVVGKVVNRGNLSG 143
D L P E G L+ KG++ DA W NV D+ + +++ V R
Sbjct: 327 DLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKME 386
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+AM + A+ ++ +V +YN ++ R + +L +M ++G+ D+ T ++
Sbjct: 387 DAMAV--KEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNV 444
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
++ + G+V KA+++L + + GL+ + + N ++ C + ++ +A + M K +
Sbjct: 445 LIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCR 504
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
NV+TYN+ I + ++G++ E +L E++ + P+ +T+ + EG+ G D
Sbjct: 505 KRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 103/227 (45%), Gaps = 1/227 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++ ++K ++ + + M + V PD+ +I++D + R G++ A+ + +
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAM 395
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
G+ + + N ++ + +AS L + MK K + +V+TYN++I G+V
Sbjct: 396 AKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEV 455
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ ++L E+ G P+ LT++ +I+G G I A E+ M++ + YN
Sbjct: 456 RKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVF 515
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
I + +G DE M PN TY + G+++ D
Sbjct: 516 IKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 9/184 (4%)
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
G S P+ + L++GL+ +++V A + F L R + P T + + LC G
Sbjct: 146 GESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIG 205
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH------EMQESGYPS 475
A + K + G S+ Y L + G+ K G +++H EM E+G
Sbjct: 206 QLRKAGDVAKDIKAWGLAPSVATYNSL---IDGYCKKGGAGNMYHVDMLLKEMVEAGISP 262
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ +I G C AV V EE ++G S + Y+ L + L + K+E L
Sbjct: 263 TAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLM 322
Query: 536 RKIK 539
+++
Sbjct: 323 EEME 326
>gi|413932624|gb|AFW67175.1| hypothetical protein ZEAMMB73_588183 [Zea mays]
Length = 520
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 193/442 (43%), Gaps = 20/442 (4%)
Query: 119 ALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKF 178
AL + +L+ +V V++R + FF WA + + +YN I+ L ++
Sbjct: 67 ALDALGAELTTPLVADVLHRLRYEEKLAFRFFAWASQQDGYNHEPTTYNDIIDILSGTRY 126
Query: 179 ----FDFMCNVLSDMAKEGVNP-DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA 233
F +CNVL M + G +E L ++ ++ + R +
Sbjct: 127 KSRQFGVLCNVLDHMKRHGSRSVPVEDLLEILRAYTEKHLTHMRKLAKKRRVRMRTPPET 186
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
++LNV+L C+ V A ++F +K K+L N TY+ + GW + + +VL+E+
Sbjct: 187 DALNVLLDAFCKCGMVKEAEAVFGRVKRKLLGNAETYSTLFFGWCRARDPKKAMKVLEEM 246
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG---CGPDTNAYNAVISNYISV 350
+ +P+S T+ I AG + +A E+F+ M+ +G P Y+ +I
Sbjct: 247 IQMKHTPESFTYVAAIISFCSAGLVSEARELFEFMRTEGLTISSPTAKTYSIMIVALAKA 306
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
+EC + M S C P++ TY LI G+ K+ A V +EM G P T
Sbjct: 307 DRMEECFELLSDMRSCGCMPDVTTYKDLIEGMCLVGKLDAAYRVLDEMGRAGFPPDIVTY 366
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
FL CS+ A+ + ++ + C+ S+ Y +++ G+ LD+ EM +
Sbjct: 367 NCFLNVFCSHRKADDALELCERMIEAHCEPSVHTYNMMMMMFFEMGEAHRALDICLEMDK 426
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL------- 523
+ YE +I GL + G+ E A +++E + + +L Y K +L
Sbjct: 427 RRCQRAIDTYEIMIYGLFDCGETEYATALLDEVINRDM---KLSYKKFDAIMLRLSDVGN 483
Query: 524 --ASNKLESAYNLFRKIKIARQ 543
A ++L F + +AR+
Sbjct: 484 LGAIHRLSEHMRKFYNVAMARR 505
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 99/247 (40%), Gaps = 4/247 (1%)
Query: 111 KGKGVIEDALWNVNVDLSLDVVGKVVN--RGNLSGEAMVLFFNWAIKHPNVAKDV-KSYN 167
K V+E+ + + S V +++ L EA LF + ++ K+Y+
Sbjct: 238 KAMKVLEEMIQMKHTPESFTYVAAIISFCSAGLVSEARELFEFMRTEGLTISSPTAKTYS 297
Query: 168 VIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDF 227
+++ AL + + +LSDM G PD+ T +++ G++ A ++L +
Sbjct: 298 IMIVALAKADRMEECFELLSDMRSCGCMPDVTTYKDLIEGMCLVGKLDAAYRVLDEMGRA 357
Query: 228 GLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEM 286
G D + N L C A L M + +V TYN+++ + ++G+
Sbjct: 358 GFPPDIVTYNCFLNVFCSHRKADDALELCERMIEAHCEPSVHTYNMMMMMFFEMGEAHRA 417
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
+ E+ T+ +I GL G + A + D + + ++A++
Sbjct: 418 LDICLEMDKRRCQRAIDTYEIMIYGLFDCGETEYATALLDEVINRDMKLSYKKFDAIMLR 477
Query: 347 YISVGDF 353
VG+
Sbjct: 478 LSDVGNL 484
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 160/348 (45%), Gaps = 2/348 (0%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F+ IK ++ DVK+ N I++ L + V M + G+ P + T + ++DS+
Sbjct: 493 FDKMIKS-RLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYC 551
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVM 268
+ G+V + + +L ++ G + + NV++ L ++ A L M K + +
Sbjct: 552 KGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAY 611
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TYN +I G+ G + E + +E+V +G SP T++ I GL + GR+ DA++ M
Sbjct: 612 TYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDM 671
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
PD +YN +I Y +G+ + + + S P + TY L+ GL + ++
Sbjct: 672 LANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGEL 731
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A ++ EM++ GI P T T + C G A + + G +L AY
Sbjct: 732 EVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATR 791
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
+ G L EM G+P D IY V+ GLC +G LE A
Sbjct: 792 IVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEA 839
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 168/376 (44%), Gaps = 1/376 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
VK ++++ ++ + +V M K ++PD++ + ++ + KA+++
Sbjct: 470 VKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYR 529
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+ +FG+K + N +L C+ V L + M+ + N +TYN++I+G SK G
Sbjct: 530 TMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKG 589
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ + + ++ E++ G + T++ LI G G + +A+ + + M KG P YN
Sbjct: 590 EFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYN 649
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+ I +G + M+ M + N P++ +Y LI G + + A +F+E+
Sbjct: 650 SFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSI 709
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
+ P+ T + L+ LC G A + + G + Y +L+ G M
Sbjct: 710 YLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMA 769
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+ + EM G D Y I G +G A + EE L KGF P ++Y+ + +
Sbjct: 770 QEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDG 829
Query: 522 LLASNKLESAYNLFRK 537
L LE A L +K
Sbjct: 830 LCKLGNLEEASELLQK 845
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 111/269 (41%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V +++I +SK V + V +++ SPD + ++ L + A+EV+
Sbjct: 469 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY 528
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
TM E G P YN ++ +Y G + + M C PN TY LI+GL K
Sbjct: 529 RTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKK 588
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+ A + EML G+ S T + + G A+ + ++ G ++ Y
Sbjct: 589 GEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATY 648
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+ L G+ + +M + D Y +I G C +G L A L+ +E
Sbjct: 649 NSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 708
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNL 534
P+ + Y+ L + L +LE A L
Sbjct: 709 IYLFPTIVTYNTLLDGLCRQGELEVAQQL 737
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 91/233 (39%)
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
LI + ++ + VFD M + PD N ++ + ++ Y+ M +
Sbjct: 475 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 534
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
+P + TY L+ K KV L++ EM RG P+ T + L G A
Sbjct: 535 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 594
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ + K G K+S Y L+ G L L EM G Y I G
Sbjct: 595 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYG 654
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
LC +G++ +A+ + + L P + Y+ L L A+ LF +++
Sbjct: 655 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELR 707
>gi|242050034|ref|XP_002462761.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
gi|241926138|gb|EER99282.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
Length = 535
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 166/353 (47%), Gaps = 4/353 (1%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y ++ L + F ++L +M + V + ++ ++RA +A + R+E
Sbjct: 138 YASMIDLLAKHHHFSLARHLLDEMRERAVPISSRLIFALIRRYVRAEMPSEAADLFRRME 197
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGA-ASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVV 284
++G + L + + + A +LF+S + +V+ Y V+ W + GQ+
Sbjct: 198 EYGSGAPEPATLASLLAALSKKRLASEAQALFDSCRTVFTPDVVLYTAVVHAWCRAGQLD 257
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E ERV E+ G P+ T++ +I+ + RAG++ A E+ M + GC P+T +NA++
Sbjct: 258 EAERVFAEMQQSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIM 317
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI-SGLLKSRKVAD-ALEVFEEMLDRG 402
++ G ++ ++ + M CEP++ TY LI + K + D AL+V ++M+ +
Sbjct: 318 RAHVKAGRSEQVLQVHNQMHQLRCEPDIITYNFLIETHCGKGQGNLDAALKVLDKMIAKK 377
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
VP T L G AA +Y+K R++ CK ++ Y LL+ + M+L
Sbjct: 378 CVPDCHTFNPMFRLLVVLGNIGAAHKLYEKMRELQCKPNVVTYNCLLKLFNKEKSMDMVL 437
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL-RKGFCPSRLV 514
+ M G + Y +I C G + A ++E + K F PS+ V
Sbjct: 438 RMKKNMDVEGIEPNMHTYAALIEAFCGRGNWKRAHATLKEMIEEKSFKPSKQV 490
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 129/287 (44%), Gaps = 41/287 (14%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
+ L+ EA LF + DV Y +V A R D V ++M + G+ P+
Sbjct: 218 KKRLASEAQALFDSCRTV---FTPDVVLYTAVVHAWCRAGQLDEAERVFAEMQQSGIMPN 274
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ T + V+D+ RAGQV +A ++L ++ D G + + N ++ R HV A S
Sbjct: 275 VYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIM-----RAHVKAGRS--- 326
Query: 258 SMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE---GLGR 314
QV+++ + ++ E PD +T++FLIE G G+
Sbjct: 327 -----------------------EQVLQVHNQMHQLRCE---PDIITYNFLIETHCGKGQ 360
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G +D A++V D M K C PD + +N + + +G+ K Y+ M C+PN+ T
Sbjct: 361 -GNLDAALKVLDKMIAKKCVPDCHTFNPMFRLLVVLGNIGAAHKLYEKMRELQCKPNVVT 419
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
Y L+ K + + L + + M GI P+ T + +E C G
Sbjct: 420 YNCLLKLFNKEKSMDMVLRMKKNMDVEGIEPNMHTYAALIEAFCGRG 466
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 170/384 (44%), Gaps = 6/384 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D +S+ +V + F+ +L+ M +EG + D T ++V+ +F R G+
Sbjct: 177 VRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVP 236
Query: 219 QMLGRLEDFGLKFDAESLNVVLWC--LCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVIS 275
+ GR+ + G + +N W LC+R +V A + M GK L NV T+ +I
Sbjct: 237 GLFGRMVEMGNPPNV--VNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLID 294
Query: 276 GWSKLGQVVEMERV-LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G K+G R+ LK + + + P+ T++ +I G + G++ A + M E+G
Sbjct: 295 GLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLA 354
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+TN Y +I + G FD + M PN+ TY +I G K K+ A +V
Sbjct: 355 PNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKV 414
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+G+ P T T + C G A+ ++ + + C + Y ++
Sbjct: 415 LRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQ 474
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+ L+ + G + Y +IAG C +G+ +A+ V E ++ G P +
Sbjct: 475 QRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPIT 534
Query: 515 YSKLSNKLLASNKLESAYNLFRKI 538
Y L + L ++LE A LF +
Sbjct: 535 YGALISGLCKESRLEEARALFETM 558
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 123/259 (47%), Gaps = 36/259 (13%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P++ T ++++ + + G++ +A +LGR+ + GL + + ++ C+ A L
Sbjct: 320 PNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFEL 379
Query: 256 FNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
N MK + L N+ TYN +I G+ K G++ + +VL+ ++G PD +T++ LI +
Sbjct: 380 MNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCK 439
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD-------FDECM---------- 357
G I A+++F+ M E C PD + Y +I+ Y FD+C+
Sbjct: 440 QGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQT 499
Query: 358 ------------------KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
K ++ M + C P+ TY LISGL K ++ +A +FE ML
Sbjct: 500 YTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETML 559
Query: 400 DRGIVPSTGTITSFLEPLC 418
D+ +VP T + C
Sbjct: 560 DKHMVPCDVTCVTLAYEYC 578
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 145/348 (41%), Gaps = 2/348 (0%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
GV PD + ++ + G+ +A +L + G D+ + VV+ C++
Sbjct: 176 GVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDV 235
Query: 253 SSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
LF M + NV+ Y + G K G V + VL+E+V +G P+ T + LI+G
Sbjct: 236 PGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDG 295
Query: 312 LGRAGRIDDAIEVF-DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
L + G + A +F +K P+ + Y +I Y G M P
Sbjct: 296 LCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 355
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
N +TYT LI G + A E+ +M G +P+ T + + C G A +
Sbjct: 356 NTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVL 415
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
+ A G Y +L+ G LDL+++M E+ D + Y +IA C
Sbjct: 416 RMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQ 475
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Q+E + + ++ L G P++ Y+ + K SA +F ++
Sbjct: 476 RQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERM 523
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 125/326 (38%), Gaps = 72/326 (22%)
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWC-LCQRLHVGAASSLFNSMKGKVLFNVMTYNIVI 274
+A ML L GL E+ N VL L QR H A F+ M V + ++ ++
Sbjct: 131 EATDMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGMG--VRPDARSFRALV 188
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G + G+ E + +L + EGFS DS T + ++ R GR D +F M E G
Sbjct: 189 LGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMG-N 247
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P PN+ YT + GL K V A V
Sbjct: 248 P----------------------------------PNVVNYTAWVDGLCKRGYVKQAFHV 273
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
EEM+ +G+ P+ T TS ++ LC G + A++L L+ +
Sbjct: 274 LEEMVGKGLKPNVYTHTSLIDGLCKIG------------------WTERAFRLFLKLV-- 313
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+ S Y + Y +I G C G+L A +++ + +G P+
Sbjct: 314 --------------KSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNT 359
Query: 515 YSKLSNKLLASNKLESAYNLFRKIKI 540
Y+ L + + A+ L K+K+
Sbjct: 360 YTTLIDGHCRGGSFDRAFELMNKMKL 385
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 162/371 (43%), Gaps = 35/371 (9%)
Query: 127 LSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVL 186
L+ + V RG+L E ++ F ++H V D+ +YN ++ A R D V
Sbjct: 219 LTYNTVINACARGDLDWEGLLGLFA-EMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVF 277
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
M + G+ P++ T S ++++F + G++ K +L +E G
Sbjct: 278 KTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGY----------------- 320
Query: 247 LHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
L ++ +YN++I +KLG + E V K++ A G P++ T+S
Sbjct: 321 -----------------LPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYS 363
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
L+ G+ GR DD E+F MKE PD YN +I + G F E + + +
Sbjct: 364 ILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDE 423
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
N +PNM+TY L+ K DA ++ M +GIVPS+ + +E A
Sbjct: 424 NIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEA 483
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
++ + +VG K ++ Y L+ + G + M+E G + + + +I G
Sbjct: 484 LVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEG 543
Query: 487 LCNIGQLENAV 497
GQ E A+
Sbjct: 544 YRQSGQYEEAI 554
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 153/361 (42%), Gaps = 49/361 (13%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y +I+ LGR + + +MA +GV + + + +++++ R GQ ++++L R++
Sbjct: 151 YTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMK 210
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSK------ 279
+ +V N++TYN VI+ ++
Sbjct: 211 ----------------------------------RERVSPNILTYNTVINACARGDLDWE 236
Query: 280 --LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
LG EM EG PD +T++ L+ G D+A VF TM E G P+
Sbjct: 237 GLLGLFAEMRH-------EGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEI 289
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y+ ++ + +G ++ K M S P++ +Y LI K + +A++VF++
Sbjct: 290 TTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQ 349
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M G VP+ T + L +G ++ + ++ + T Y +L+R G
Sbjct: 350 MQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGY 409
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
++ L+H++ + + E YE ++ G E+A ++ KG PS YS
Sbjct: 410 FKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSG 469
Query: 518 L 518
L
Sbjct: 470 L 470
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 1/241 (0%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P+ ++ +I LGR G ++ E+FD M +G +Y A+I+ Y G ++ ++
Sbjct: 146 PNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLEL 205
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL-EVFEEMLDRGIVPSTGTITSFLEPLC 418
+ M PN+ TY +I+ + + L +F EM G+ P T + L
Sbjct: 206 LERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACA 265
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
+ G A M++K + G +T Y ++ GK + L EM+ GY D
Sbjct: 266 ARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDIS 325
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y +I +G ++ A+ V ++ G P+ YS L N + + LF ++
Sbjct: 326 SYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQM 385
Query: 539 K 539
K
Sbjct: 386 K 386
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ +YN ++ R + +LS M + G++ + ++ S +++ + ++GQ +AI+
Sbjct: 499 IDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFV 558
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+E + D ++L VL C V + F +K +L +V+ Y ++++ ++K G
Sbjct: 559 EMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNG 618
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE-VFDTMKEKGCGPDTNAY 340
+ + +L E++ S +I+G +E VFD + +GCG Y
Sbjct: 619 RWDDASELLDEMIKTRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFY 678
Query: 341 NAVI 344
N ++
Sbjct: 679 NTLL 682
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 115/521 (22%), Positives = 228/521 (43%), Gaps = 47/521 (9%)
Query: 58 ELSDLFQISSHNSFPNVYKESRSNSVKRIDS-SRAVDEFLLPEERLRGVFLQKLKGKGVI 116
E++ +F++ + + ++ + V R D SR +DE + R+ +F K
Sbjct: 20 EIAQMFRLPNSHEGNHLNNSMKGGHVLRRDPYSRTLDERFI---RILKIF----KWGPDA 72
Query: 117 EDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRR 176
E AL + + + +V +++ + ++ + FF WA K N D +Y +++ L
Sbjct: 73 EKALEVLKLKVDPRLVREIL-KIDVEVSVKIQFFKWAGKRRNFEHDSTTYMALIRCLDEH 131
Query: 177 KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESL 236
+ F + + DM K LS ++ +A V +A+ + +++ + A +
Sbjct: 132 RMFGEVWKTIQDMVKGSCAMAPAELSEIVRILGKAKMVNRALSVFYQVKGRKCRPTASTY 191
Query: 237 NVVLWCLCQRLHVGAASSLFNSMKGKV--LFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
N ++ L Q H L+N M +V + +TY+ +IS ++KL + R+ E+
Sbjct: 192 NSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMK 251
Query: 295 AEGFSPDS-----------------------------------LTFSFLIEGLGRAGRID 319
G P + T++ LI GLG++GR++
Sbjct: 252 ENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVE 311
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
DA + M + GC PD N +I+ + +K + M NC PN+ TY +I
Sbjct: 312 DAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTII 371
Query: 380 SGLLKSR-KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
L +++ +++A FE M GIVPS+ T + ++ C A+++ ++ + G
Sbjct: 372 KSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGF 431
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
AY L+ L + + +L+ E++E+ S +Y +I G+L A+
Sbjct: 432 PPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRLNEAIN 491
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ E + G P Y+ L ++ + +++ A++LFR ++
Sbjct: 492 LFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTME 532
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 157/339 (46%), Gaps = 5/339 (1%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +Y +++ LG+ + +M K+G PD+ ++ +++ R+ + AI++
Sbjct: 294 VFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFD 353
Query: 223 RLEDFGLKFDAESLNVVLWCLCQ-RLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++ + + N ++ L + + + ASS F MK ++ + TY+I+I G+ K
Sbjct: 354 EMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKT 413
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+V + +L+E+ +GF P + LI LG A R D A E+F +KE Y
Sbjct: 414 NRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVY 473
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+I ++ G +E + + M C P++ Y L++G++++ ++ +A +F M +
Sbjct: 474 AVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEE 533
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G P + L L G P A+ M+ K + K + ++ +L LS G
Sbjct: 534 NGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEE 593
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
L EM G+ D Y ++ +G++++ +V
Sbjct: 594 AAKLMQEMSSKGFQYDLITYSSILEA---VGKVDDCKMV 629
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 164/394 (41%), Gaps = 37/394 (9%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +Y+ ++ A + D + +M + G+ P + + +M + + G+V +A+ ++
Sbjct: 223 DTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLV 282
Query: 222 -------------------------GRLEDF----------GLKFDAESLNVVLWCLCQR 246
GR+ED G K D +N ++ L +
Sbjct: 283 KEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRS 342
Query: 247 LHVGAASSLFNSMKG-KVLFNVMTYNIVI-SGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
H+ A LF+ MK NV+TYN +I S + + E + + +G P S T
Sbjct: 343 NHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFT 402
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
+S LI+G + R++ A+ + + M EKG P AY ++I+ +D + ++ +
Sbjct: 403 YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELK 462
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
+ Y +I K ++ +A+ +F EM G P + + +
Sbjct: 463 ENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMD 522
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A +++ + GC + ++ ++L L+ G L+++ +M+ S D + ++
Sbjct: 523 EAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTIL 582
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
L G E A +M+E KGF + YS +
Sbjct: 583 GCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSI 616
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 39/178 (21%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ LF +K DV +YN ++ + R + D ++ M + G PD+ + +I
Sbjct: 488 EAINLFNE--MKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNI 545
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
+++ R G A++M ++++ +K D S N +L CL
Sbjct: 546 ILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTILGCL-------------------- 585
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
S+ G E ++++E+ ++GF D +T+S ++E + G++DD
Sbjct: 586 --------------SRAGLFEEAAKLMQEMSSKGFQYDLITYSSILEAV---GKVDDC 626
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 33/178 (18%), Positives = 78/178 (43%), Gaps = 3/178 (1%)
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
N E + TY LI L + R + + ++M+ + ++ + L + A
Sbjct: 113 NFEHDSTTYMALIRCLDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRILGKAKMVNRA 172
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM--QESGYPSDGEIYEYVI 484
+ ++ + + C+ + + Y ++ L G + +L++EM + +P D Y +I
Sbjct: 173 LSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEVHCFP-DTVTYSALI 231
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+ + + ++A+ + +E G P+ +Y+ L K+E A L ++++ R
Sbjct: 232 SAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARR 289
>gi|302798519|ref|XP_002981019.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
gi|300151073|gb|EFJ17720.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
Length = 448
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 180/418 (43%), Gaps = 38/418 (9%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
V D SYN++V+ L + D +LS M EG +PD+ T +++D F +V +
Sbjct: 5 GVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEV 64
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCL-CQRLHVGAASSLFNSMKGKVLFNVMTYNIVISG 276
++ LE G+ + N +L L C G ++ L +V+ Y ++
Sbjct: 65 CELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDC 124
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K G+ E V+ E++ + PD +T++ LI L + R DDA++VFD M EK P+
Sbjct: 125 LIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPN 183
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+ Y ++++ + D + + M P+ TY L+ L + A ++
Sbjct: 184 VDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHS 243
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK-----------------------KA 433
M RG VP T S + C G A +++K +A
Sbjct: 244 SMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRA 303
Query: 434 RKV-------------GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
KV GC +L Y L+ + L L+ M+E G+ + IY
Sbjct: 304 SKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIY 363
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
I GLC +G++ A ++S+ +G P + Y+ L L +N+++ A+ L+R++
Sbjct: 364 STFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREM 421
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 160/372 (43%), Gaps = 42/372 (11%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA-KEGVNPDLETL 201
GE LF ++ VA + +YN I+KAL FD SD+A +G P +
Sbjct: 62 GEVCELF--QELESNGVAVGMLAYNAILKALMCSGDFDGGFK-FSDIAVGDGSLPHVLAY 118
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
++D I+ G+ +A +++G + + D + ++ LC+ A +F+ M
Sbjct: 119 KTMLDCLIKTGKTREASEVVGEMIKKSVP-DGMTYTALISVLCKHNRADDAMKVFDIMVE 177
Query: 262 K-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
K ++ NV Y +++ + ++ R+ E++ G+ P + T+ L+ L GR
Sbjct: 178 KEIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYL 237
Query: 321 AIEVFDTMKEKGCGPDTNAY------------------------------------NAVI 344
A ++ +M+ +G PD N Y N +I
Sbjct: 238 AYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLI 297
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+E ++ GM C P + TY LI G K+ +V AL++F M ++G
Sbjct: 298 EGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFS 357
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P+T ++F++ LC G + A ++++ + GC Y L+R L G + L
Sbjct: 358 PNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRL 417
Query: 465 WHEMQESGYPSD 476
+ EM E GY +D
Sbjct: 418 YREMGERGYIAD 429
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 141/343 (41%), Gaps = 74/343 (21%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
+YN+++ G +KL V + +L +V EG+ PD +T L++ R+ + E+F +
Sbjct: 12 SYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEVCELFQEL 71
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKY---------------YKGMSSYNC----- 368
+ G AYNA++ + GDFD K+ YK M +C
Sbjct: 72 ESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTM--LDCLIKTG 129
Query: 369 ----------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
P+ TYT LIS L K + DA++VF+ M+++ IVP+ TS
Sbjct: 130 KTREASEVVGEMIKKSVPDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNVDVYTS 189
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
L C A ++ + + G S + Y LLLR L G+ + D+ M+ G
Sbjct: 190 LLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRG 249
Query: 473 YPSD-----------------------------GE-------IYEYVIAGLCNIGQLENA 496
+ D GE IY +I GLC ++E A
Sbjct: 250 HVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRASKVEEA 309
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ V + KG P+ Y+ L +N+++ A LFR ++
Sbjct: 310 LEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAME 352
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 125/272 (45%), Gaps = 4/272 (1%)
Query: 135 VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
V+ + N + +AM +F K + +V Y ++ A R + D + +M + G
Sbjct: 158 VLCKHNRADDAMKVFDIMVEKE--IVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGY 215
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
P T +++ G+ Y A + + G D + +++ C + A
Sbjct: 216 GPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKV 275
Query: 255 LFNS-MKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
LF ++G K + YN++I G + +V E V +V +G P T++ LI G
Sbjct: 276 LFKEVLEGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGF 335
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
+A +D A+++F M+EKG P+T Y+ I VG +E ++++ C P+
Sbjct: 336 FKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDN 395
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
TY LI GL + ++ +A ++ EM +RG +
Sbjct: 396 VTYNALIRGLFGANRMDEAHRLYREMGERGYI 427
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 173/378 (45%), Gaps = 1/378 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +V +Y ++ L + + D V M GV PD T + ++ ++ G+ + +
Sbjct: 192 IPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVV 251
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
QML + GL+ D + ++L LC+ A F+SM + + +V Y I++ G+
Sbjct: 252 QMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGY 311
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G + EM L +V G SP+ F+ + + I++A+ +F+ M+++G PD
Sbjct: 312 ATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDV 371
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
++ A+I +G D+ + + M + PN+ ++ L+ GL K A E+F E
Sbjct: 372 VSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFE 431
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+LD+GI + + LC+ G A + +VG + ++ +Y L+ G+
Sbjct: 432 VLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGR 491
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L M +G + Y ++ G C ++++A + E L KG P Y+
Sbjct: 492 IDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNT 551
Query: 518 LSNKLLASNKLESAYNLF 535
+ + L + + A L+
Sbjct: 552 ILHGLFQTGRFSEANELY 569
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 164/352 (46%), Gaps = 1/352 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+L M++ G PD+ + V++ F R GQV KA + + D G+ + + V+ LC
Sbjct: 148 LLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLC 207
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ V A +F M + V + TYN +I G+ G+ E+ ++L+E+ G PD +
Sbjct: 208 KAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCI 267
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T++ L++ L + GR +A FD+M KG PD Y ++ Y + G E + M
Sbjct: 268 TYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLM 327
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
PN + + K + +A+ +F +M +G+ P + + ++ LC G
Sbjct: 328 VGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRV 387
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A++ + + G ++ + L+ L GK +L+ E+ + G D + +
Sbjct: 388 DDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTL 447
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ LCN G++ A +++ +R G P+ + Y+ L + +++ A L
Sbjct: 448 MCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLL 499
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 189/406 (46%), Gaps = 16/406 (3%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYN---VIVKALGRRKFFDFMCNVLSDMAKE---GVNPD 197
EA+ LF + H V+++N +V G + + ++ + MA+E V P+
Sbjct: 32 EALKLFDE--LLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPN 89
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS--L 255
T SI++ F R G++ G + G + + ++ +L LC V A+ L
Sbjct: 90 ACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILL 149
Query: 256 FNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
+ +V+ YN VI+G+ + GQV + + E++ +G P+ +T++ +I+GL +A
Sbjct: 150 LRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKA 209
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
+D A VF M ++G PD YN +I Y+S G + E ++ + MS++ EP+ TY
Sbjct: 210 QVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITY 269
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
L+ L K+ + +A F+ M +GI P L + G
Sbjct: 270 ALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVG 329
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
G + + ++ + K M+ + ++++M++ G D + +I LC +G+
Sbjct: 330 NGVSPNRRIFNIMF---CAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGR 386
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+++AVL + + +G P+ V+S L L K E A LF ++
Sbjct: 387 VDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEV 432
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 161/354 (45%), Gaps = 3/354 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EAM +F ++ ++ DV S+ ++ AL + D + M EGV P++ S
Sbjct: 354 EAMHIFNK--MRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSS 411
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
++ G+ KA ++ + D G+ DA N ++ LC V A L + M +
Sbjct: 412 LVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVG 471
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
V NV++YN +++G G++ E ++L +V+ G P+ T++ L+ G +A R+DDA
Sbjct: 472 VRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAY 531
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+F M KG P YN ++ G F E + Y M + + ++ TY +++GL
Sbjct: 532 SLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGL 591
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K+ V +A ++F + + + T + L G AM ++ G +
Sbjct: 592 CKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDV 651
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
Y+L+ L G G L+ M++SG + + ++ L + G + A
Sbjct: 652 VTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRA 705
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 133/291 (45%), Gaps = 5/291 (1%)
Query: 254 SLFNSM----KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
SLF M KV N TY+I+I + ++G++ I+ G+ + + S L+
Sbjct: 73 SLFTRMARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLL 132
Query: 310 EGLGRAGRIDDAIEVFDT-MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
+GL A R+D+A ++ M E GC PD AYN VI+ + G ++ + M
Sbjct: 133 KGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGI 192
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
PN+ TYT +I GL K++ V A VF++M+DRG+ P GT + S G +
Sbjct: 193 PPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQ 252
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
M ++ G + Y LLL L G+C + M G D IY ++ G
Sbjct: 253 MLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYA 312
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G L ++ + G P+R +++ + +E A ++F K++
Sbjct: 313 TKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMR 363
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/380 (19%), Positives = 170/380 (44%), Gaps = 13/380 (3%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+ + + +N++ A ++ + ++ + M ++G++PD+ + ++D+ + G+V A+
Sbjct: 332 VSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAV 391
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG----AASSLFNSMKGKVLFNVMTYNIVI 274
++ + G+ + + +++ LC VG A F + + + + +N ++
Sbjct: 392 LQFNQMINEGVTPNIFVFSSLVYGLCT---VGKWEKAEELFFEVLDQGICVDAVFFNTLM 448
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+V+E +R++ ++ G P+ ++++ L+ G GRID+A ++ D M G
Sbjct: 449 CNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLK 508
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ Y ++ Y D+ ++ M P + TY ++ GL ++ + ++A E+
Sbjct: 509 PNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANEL 568
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ M++ T L LC A M+++ +L + +++ L
Sbjct: 569 YLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLK 628
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC---NIGQLENAVLVMEESLRKGFCPS 511
G+ +DL+ + G D Y + L ++G+ + ME+S G P+
Sbjct: 629 GGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKS---GTAPN 685
Query: 512 RLVYSKLSNKLLASNKLESA 531
+ + L +LL + A
Sbjct: 686 SHMLNALVRRLLHRGDISRA 705
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 122/272 (44%), Gaps = 14/272 (5%)
Query: 178 FFDFMCNVLSD------------MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
F MCN+ ++ M + GV P++ + + ++ G++ +A ++L +
Sbjct: 444 FNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMV 503
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
GLK + + ++L C+ V A SLF M K V V TYN ++ G + G+
Sbjct: 504 SNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFS 563
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E + ++ D T++ ++ GL + +D+A ++F + K D+ +N +I
Sbjct: 564 EANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMI 623
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ G ++ M + +S+Y P++ TY + L++ + + +F M G
Sbjct: 624 GALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTA 683
Query: 405 PSTGTITSFLEPLCSYGP-PHAAMMMYKKARK 435
P++ + + + L G A + +YK K
Sbjct: 684 PNSHMLNALVRRLLHRGDISRAGVYLYKLDEK 715
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 99/217 (45%), Gaps = 1/217 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y ++++ + + D ++ +M +GV P + T + ++ + G+ +A ++ +
Sbjct: 513 TYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNM 572
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
+ K D + N++L LC+ V A +F + K + +T+NI+I K G+
Sbjct: 573 INSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRK 632
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ + I A G PD +T+ + E L G + + +F M++ G P+++ NA+
Sbjct: 633 EDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNAL 692
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
+ + GD Y + N T + LIS
Sbjct: 693 VRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLIS 729
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 1/190 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V V +YN I+ L + F + +M D+ T +I+++ + V +A
Sbjct: 542 VTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAF 601
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+M RL + D+ + N+++ L + A LF ++ L +V+TY ++
Sbjct: 602 KMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENL 661
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G + E + + + G +P+S + L+ L G I A + EK +
Sbjct: 662 IEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEA 721
Query: 338 NAYNAVISNY 347
+ + +IS Y
Sbjct: 722 STTSMLISLY 731
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 162/371 (43%), Gaps = 35/371 (9%)
Query: 127 LSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVL 186
L+ + V RG+L E ++ F ++H V D+ +YN ++ A R D V
Sbjct: 219 LTYNTVINACARGDLDWEGLLGLFA-EMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVF 277
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
M + G+ P++ T S ++++F + G++ K +L +E G
Sbjct: 278 KTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGY----------------- 320
Query: 247 LHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
L ++ +YN++I +KLG + E V K++ A G P++ T+S
Sbjct: 321 -----------------LPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYS 363
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
L+ G+ GR DD E+F MKE PD YN +I + G F E + + +
Sbjct: 364 ILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDE 423
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
N +PNM+TY L+ K DA ++ M +GIVPS+ + +E A
Sbjct: 424 NIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEA 483
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
++ + +VG K ++ Y L+ + G + M+E G + + + +I G
Sbjct: 484 LVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEG 543
Query: 487 LCNIGQLENAV 497
GQ E A+
Sbjct: 544 YRQSGQYEEAI 554
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 153/361 (42%), Gaps = 49/361 (13%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y +I+ LGR + + +MA +GV + + + +++++ R GQ ++++L R++
Sbjct: 151 YTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMK 210
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSK------ 279
+ +V N++TYN VI+ ++
Sbjct: 211 ----------------------------------RERVSPNILTYNTVINACARGDLDWE 236
Query: 280 --LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
LG EM EG PD +T++ L+ G D+A VF TM E G P+
Sbjct: 237 GLLGLFAEMRH-------EGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEI 289
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y+ ++ + +G ++ K M S P++ +Y LI K + +A++VF++
Sbjct: 290 TTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQ 349
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M G VP+ T + L +G ++ + ++ + T Y +L+R G
Sbjct: 350 MQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGY 409
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
++ L+H++ + + E YE ++ G E+A ++ KG PS YS
Sbjct: 410 FKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSG 469
Query: 518 L 518
L
Sbjct: 470 L 470
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 1/241 (0%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P+ ++ +I LGR G ++ E+FD M +G +Y A+I+ Y G ++ ++
Sbjct: 146 PNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLEL 205
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL-EVFEEMLDRGIVPSTGTITSFLEPLC 418
+ M PN+ TY +I+ + + L +F EM G+ P T + L
Sbjct: 206 LERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACA 265
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
+ G A M++K + G +T Y ++ GK + L EM+ GY D
Sbjct: 266 ARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDIS 325
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y +I +G ++ A+ V ++ G P+ YS L N + + LF ++
Sbjct: 326 SYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQM 385
Query: 539 K 539
K
Sbjct: 386 K 386
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ +YN ++ R + +LS M + G++ + ++ S +++ + ++GQ +AI+
Sbjct: 499 IDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFV 558
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+E + D ++L VL C V + F +K +L +V+ Y ++++ ++K G
Sbjct: 559 EMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNG 618
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE-VFDTMKEKGCGPDTNAY 340
+ + +L E++ S +I+G +E VFD + +GCG Y
Sbjct: 619 RWDDASELLDEMIKTRVSSIHQVIGQMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFY 678
Query: 341 NAVI 344
N ++
Sbjct: 679 NTLL 682
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 187/429 (43%), Gaps = 44/429 (10%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F +H VA VK N +++ L +D M V SDM + GV P + T + ++DSF
Sbjct: 182 FQEMARH-GVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFC 240
Query: 210 RAGQVYKAIQMLGRLED--FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK------- 260
+AG++ +A+ +L +E G + + NVV+ L ++ + A+ L + M+
Sbjct: 241 KAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKASA 300
Query: 261 -------------------GKVLF---------NVMTYNIVISGWSKLGQVVEMERVLKE 292
G +L V+TYN +I G K G + E
Sbjct: 301 FTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDE 360
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+ A+G PD +T++ LI G +AG + A+ +F +K G GP YN +I Y +GD
Sbjct: 361 MRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGD 420
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
+ + + M+ +C P++ TYT L++G R +A F+EML +G+ P +
Sbjct: 421 LEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNT 480
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQ 469
+ + G A + ++ G Y +L + G K G L D LW +M
Sbjct: 481 RISAELTIGAITNAFQLREEMMLRGISSDTVTYNVL---IDGLCKTGSLKDAYVLWMKMV 537
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
G D Y +I C G+L A + + + G PS + Y+ + L
Sbjct: 538 TDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLY 597
Query: 530 SAYNLFRKI 538
AY FRK+
Sbjct: 598 LAYGWFRKM 606
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 164/366 (44%), Gaps = 1/366 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+++ + V +YN ++ L + + +M +G+ PDL T + +++ + +AG
Sbjct: 326 MENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGN 385
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
+ +A+ + G L+ GL + N+++ C+ + A L M + L +V TY I
Sbjct: 386 LKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTI 445
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+++G + + + E++++G PD ++ I G I +A ++ + M +G
Sbjct: 446 LMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRG 505
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
DT YN +I G + + M + + TYT LI + ++ +A
Sbjct: 506 ISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAK 565
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+F+ M+ G+ PS T T F+ C G + A ++K + G + + Y +L+ L
Sbjct: 566 NIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHAL 625
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G+ +HEM E G + Y +I G C G +A+ + E +KG P
Sbjct: 626 CRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDH 685
Query: 513 LVYSKL 518
++ L
Sbjct: 686 CTHNAL 691
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 167/375 (44%), Gaps = 2/375 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YNV++ L R+ + L D+ + T + ++ + V KA +L +
Sbjct: 268 TYNVVINGLARKGELEKAAQ-LVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEM 326
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
E+ G+ + N ++ L + + AA F+ M+ K +L +++TYN +I+G+ K G +
Sbjct: 327 ENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNL 386
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ + ++ G P LT++ LI+G R G ++ A + + M E+ C PD Y +
Sbjct: 387 KQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTIL 446
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
++ V + ++ M S EP+ Y IS L + +A ++ EEM+ RGI
Sbjct: 447 MNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGI 506
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
T T ++ LC G A +++ K G +L Y L+ G+ +
Sbjct: 507 SSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKN 566
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
++ M SG Y I C G L A + L +G P+ + Y+ L + L
Sbjct: 567 IFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALC 626
Query: 524 ASNKLESAYNLFRKI 538
+ ESAY F ++
Sbjct: 627 RMGRTESAYQHFHEM 641
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 107/245 (43%), Gaps = 12/245 (4%)
Query: 105 VFLQKLKGKGVIEDAL-WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDV 163
+F ++ KG+ D +N + L +G + N L E M+ ++ D
Sbjct: 461 IFFDEMLSKGLEPDCFAYNTRISAEL-TIGAITNAFQLREEMMLR---------GISSDT 510
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+YNV++ L + + M +G+ D T + ++ + G++ +A +
Sbjct: 511 VTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDG 570
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQ 282
+ GL + + + C+R ++ A F M + V N +TYN+++ ++G+
Sbjct: 571 MVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGR 630
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ E++ G P+ T++ LI+G + G AI ++ M +KG PD +NA
Sbjct: 631 TESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNA 690
Query: 343 VISNY 347
+ +
Sbjct: 691 LFKGF 695
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +Y ++ A R N+ M G++P + T +I + ++ R G +Y A
Sbjct: 544 DCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWF 603
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
++ + G++ + + NV++ LC+ +A F+ M + L N TY ++I G K
Sbjct: 604 RKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKE 663
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
G V R+ E+ +G PD T + L +G G G + DA++ + +
Sbjct: 664 GNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGE-GHMYDAVQYLENV 710
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 86/226 (38%), Gaps = 9/226 (3%)
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
+ F M G P N V+ +D+ Y M EP++ TY L+
Sbjct: 178 CLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLD 237
Query: 381 GLLKSRKVADALEVFEEMLDR--GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
K+ ++ A+ + ++M R G +P+ T + L G A + R +
Sbjct: 238 SFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMR-LSK 296
Query: 439 KLSLTAYKLLLRRLSG---FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
K S Y L+ L K G LL EM+ G Y +I GL G E
Sbjct: 297 KASAFTYNPLITGLLARDFVEKAGALL---LEMENEGIVPTVVTYNTLIDGLFKTGNAEA 353
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
A + +E KG P + Y+ L N + L+ A LF +K A
Sbjct: 354 AQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRA 399
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 187/418 (44%), Gaps = 38/418 (9%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D +Y ++V ++K + M G+NP+ T + ++D FI+ G + +A+
Sbjct: 307 LGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEAL 366
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ + GLK + + N ++ + + + A SLFN M + + TYN++I G+
Sbjct: 367 RIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGY 426
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K + + +L E+ A +P T+S LI GL + + A EV D M G P+
Sbjct: 427 LKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNV 486
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA------ 391
Y +I Y+ ++ ++ K M + P++ Y LI GL +++KV +A
Sbjct: 487 FMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVD 546
Query: 392 -------------------------LEV----FEEMLDRGIVPSTGTITSFLEPLCSYGP 422
++V F++ML GIVP+ T ++ C G
Sbjct: 547 MGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGN 606
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A+ +K + G + AY ++ LS GK + ++ + ++G D +Y
Sbjct: 607 TVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNS 666
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK--LLASNKLESAYNLFRKI 538
+I+G C G +E A + +E L G P+ +VY+ L N S L A+ LF ++
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEM 724
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 167/373 (44%), Gaps = 2/373 (0%)
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
N +++ L + V M + + PD+ T + V+ + + G V K +L +E
Sbjct: 211 NNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK 270
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVE 285
K + + N + LCQ V A + M K L + TY +++ G+ K + E
Sbjct: 271 -ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKE 329
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+ + + + + G +P+ T++ LI+G + G I++A+ + D M +G + YNA+I
Sbjct: 330 AKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIG 389
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
G+ + M + M EP+ TY LI G LKS +A A E+ EM R + P
Sbjct: 390 GIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTP 449
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
S T + + LC A + + + G K ++ Y L++ + M ++L
Sbjct: 450 SPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELL 509
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
M +G D Y +I GLC ++E A +++ + KG P+ Y N S
Sbjct: 510 KIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKS 569
Query: 526 NKLESAYNLFRKI 538
+++ A F+ +
Sbjct: 570 GEIQVAERYFKDM 582
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 153/317 (48%), Gaps = 4/317 (1%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M ++G+ PD+ S ++ S + G+ +A+ + + G+ D N ++ C+
Sbjct: 617 MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGD 676
Query: 249 VGAASSLFNSM-KGKVLFNVMTYNIVIS--GWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
+ AS L++ M + N++ YN +I+ G+ K G + E ++ E++++G SPD +
Sbjct: 677 IEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIY 736
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
LI+G G+ G ++ A+ +F ++K G +A+N++I ++ G E + + M
Sbjct: 737 CILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVD 795
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
PN+ TYT LI K+ + +A ++F +M R I+P+T T TS L G
Sbjct: 796 KKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFK 855
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
+ ++K G AY ++ GK L L ++ G + ++++ +I
Sbjct: 856 MISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIF 915
Query: 486 GLCNIGQLENAVLVMEE 502
LC Q+ + ++ E
Sbjct: 916 HLCKEKQISTVLELLSE 932
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 173/386 (44%), Gaps = 11/386 (2%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V +V Y ++KA + ++ +L M GV PDL + ++ RA +V +A
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAK 541
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+L + + G+K +A + + + + A F M ++ N + Y I+I G
Sbjct: 542 MLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGH 601
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+G VE K ++ +G PD +S +I L + G+ +A+ VF + G PD
Sbjct: 602 CDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDV 661
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS--GLLKSRKVADALEVF 395
YN++IS + GD ++ + Y M PN+ Y LI+ G KS + +A ++F
Sbjct: 662 FLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLF 721
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK--VGCKLSLTAYKLLLRRLS 453
+EM+ +GI P ++ G A+ ++ +A++ VG SL+A+ L+
Sbjct: 722 DEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG---SLSAFNSLIDSFC 778
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
GK +L+ +M + + Y +I +E A + + + P+ L
Sbjct: 779 KHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTL 838
Query: 514 VYSKLSNKLLASNKLESAYNLFRKIK 539
Y+ L LL+ N++ + + + K
Sbjct: 839 TYTSL---LLSYNQIGNRFKMISLFK 861
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 163/374 (43%), Gaps = 1/374 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN + L + D V M ++G+ PD T ++++D F + + +A + +
Sbjct: 278 TYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESM 337
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQV 283
GL + + ++ + ++ A + + M + L NV+TYN +I G +K G++
Sbjct: 338 PSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEM 397
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ + E++ G PD+ T++ LI+G ++ + A E+ MK + P Y+ +
Sbjct: 398 AKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVL 457
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS D + + M +PN+ Y LI ++ + A+E+ + M+ G+
Sbjct: 458 ISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGV 517
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+P + LC A M+ + G K + Y + S G+ +
Sbjct: 518 LPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAER 577
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ +M SG + IY +I G C++G A+ + L KG P YS + + L
Sbjct: 578 YFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLS 637
Query: 524 ASNKLESAYNLFRK 537
+ K + A +F K
Sbjct: 638 KNGKTKEAMGVFLK 651
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 124/288 (43%), Gaps = 8/288 (2%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N+ ++I I + LG + E V ++EGF P + + L+ L +A + +V+
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+M E PD Y VI + VGD + M C+PN+ TY I GL ++
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQT 289
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
V +ALEV + M+++G+ P T T ++ C A ++++ G + Y
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ G L + EM G + Y +I G+ G++ A+ + E L
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYARRLWRS 553
G P Y+ L + L S+ + A L ++K AR+L S
Sbjct: 410 AGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMK-------ARKLTPS 450
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 144/308 (46%), Gaps = 11/308 (3%)
Query: 113 KGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKA 172
KG+I D + SL GK + EAM +F + V DV YN ++
Sbjct: 620 KGLIPDIRAYSAIIHSLSKNGK-------TKEAMGVFLKFL--KTGVVPDVFLYNSLISG 670
Query: 173 LGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF--IRAGQVYKAIQMLGRLEDFGLK 230
+ + + +M G+NP++ + +++ + ++G + +A ++ + G+
Sbjct: 671 FCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGIS 730
Query: 231 FDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVL 290
D +++ + ++ A SLF+ + K + ++ +N +I + K G+V+E +
Sbjct: 731 PDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELF 790
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
++V + +P+ +T++ LI+ G+A +++A ++F M+ + P+T Y +++ +Y +
Sbjct: 791 DDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQI 850
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
G+ + + +K M + + Y + S K K +AL++ + L GI
Sbjct: 851 GNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVF 910
Query: 411 TSFLEPLC 418
+ + LC
Sbjct: 911 DALIFHLC 918
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 6/214 (2%)
Query: 322 IEVFDTM----KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
+E+ D++ +E G G + ++ I + +G +E + S P +
Sbjct: 154 LEILDSLVRCYREFG-GSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNN 212
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
L+ LLK+ + +V+ M++ IVP T T+ ++ C G M+ + K
Sbjct: 213 LMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-E 271
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
CK +L Y + L G L++ M E G DG Y ++ G C + + A
Sbjct: 272 CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAK 331
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
L+ E G P+R Y+ L + + +E A
Sbjct: 332 LIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEA 365
>gi|125537408|gb|EAY83896.1| hypothetical protein OsI_39118 [Oryza sativa Indica Group]
Length = 693
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 180/427 (42%), Gaps = 53/427 (12%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A D+ N+ V L D M + GV PD+ T + ++ A +V A++
Sbjct: 161 APDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAME 220
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV-LF-NVMTYNIVISGW 277
M+G + G D S V+ LC+ V L M+ LF + +TYN++I G
Sbjct: 221 MIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGL 280
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+K G E L+E + F D + +S ++ GR+ +A E+ M KGC PD
Sbjct: 281 AKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDV 340
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE---- 393
Y+ V+ + +G+ D+ K K M +C+PN T+T L++GL K K ++A E
Sbjct: 341 VTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNK 400
Query: 394 -------------------------------VFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
V +ML +G P+T I + LC G
Sbjct: 401 SEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDGK 460
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
P A ++ + GC +++ + ++ S G L L +M S D Y
Sbjct: 461 PAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTV 520
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN----------------KLLASN 526
V+ L G+L+ A ++E+ L +G P+ + Y + + K+LA
Sbjct: 521 VVDALGKKGRLKEATGLVEKMLNRGLLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQ 580
Query: 527 KLESAYN 533
+++SAYN
Sbjct: 581 EMKSAYN 587
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 178/396 (44%), Gaps = 17/396 (4%)
Query: 149 FFNWAIKH------PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
FF WA + P A+ + SY+ R VL M K+G PD+ +
Sbjct: 116 FFRWADRQWRYRHAPEFAQLMLSYS-------RAGKLRSAMRVLHLMQKDGCAPDISICN 168
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KG 261
+ ++ + AG+V KA++ R+ G++ D + N ++ LC V A + M +
Sbjct: 169 MAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQN 228
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAE-GFSPDSLTFSFLIEGLGRAGRIDD 320
+ ++Y V+S K +V E+ +L+ + + G PD +T++ LI GL + G D+
Sbjct: 229 GCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADE 288
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A+E + K D Y+A++ ++ G E + M S C+P++ TY+ ++
Sbjct: 289 ALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVD 348
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
G + ++ A ++ + M P+T T T+ L LC G A + K+ +
Sbjct: 349 GFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTP 408
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG-YPSDGEIYEYVIAGLCNIGQLENAVLV 499
S Y +++ GK D+ +M + G +P+ EI +I LC G+ A
Sbjct: 409 SDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEI-NLLIHALCKDGKPAEAKDF 467
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
ME+ KG + + ++ + + LESA +L
Sbjct: 468 MEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLM 503
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 162/344 (47%), Gaps = 4/344 (1%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
++ +M +G PD+ T S V+D F R G++ +A +M+ + K + + +L LC
Sbjct: 327 IVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLC 386
Query: 245 QRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ A L N + + + +TY++V+ G+ + G++ E V+ +++ +GF P ++
Sbjct: 387 KVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTV 446
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
+ LI L + G+ +A + + + KGC + + VI + GD + + M
Sbjct: 447 EINLLIHALCKDGKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDM 506
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
N P++ TYT ++ L K ++ +A + E+ML+RG++P+ T + + C G
Sbjct: 507 YLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGLLPTPVTYRTVIHRYCEKGNL 566
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
+ + +K + + +AY ++ +L FGK L +++ + D + +
Sbjct: 567 EDLLNLLEKM--LARQEMKSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHIL 624
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
+ N G A V R+ P + K+ N+ LAS K
Sbjct: 625 MESFLNRGLGLQAYNVACRMFRRNLIPDVKLCQKVDNQ-LASEK 667
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 176/395 (44%), Gaps = 3/395 (0%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
M+ FN +++ + D YN+++ A G+R D + + M + GV PD T V+
Sbjct: 386 MLNLFN-SMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVI 444
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKV 263
+F R G++ A+ ++ GLK D N ++ C ++ A L + M +G
Sbjct: 445 AAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIP 504
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
N + +N +I+ K G+VVE + + ++ G PD +TF+ LI+G G G+++ A
Sbjct: 505 RPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFG 564
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
V D M G PD Y+A++ Y G D+ + ++ M S +P TY ++ GL
Sbjct: 565 VLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLF 624
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
+ A ++ EM++ G T L LC A+ ++KK + K ++
Sbjct: 625 NDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIA 684
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
++ + K +L+ + +G + Y +I L G +E A +
Sbjct: 685 IINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLM 744
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ G PS + + + LL ++ A N K+
Sbjct: 745 EKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKV 779
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 189/464 (40%), Gaps = 44/464 (9%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
V L ++ GV D + S V K + + S A+ L K + +V
Sbjct: 176 VLLHRMPELGVEPDTI-------SYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVV 228
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA------------- 211
SYN ++ R CN+ +M ++GV PD+ T S +D+ +A
Sbjct: 229 SYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQM 288
Query: 212 ----------------------GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHV 249
GQ + M + GL D + N + LC+
Sbjct: 289 ISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKS 348
Query: 250 GAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
A+ F+SM K +++TY++++ G++ G VV+M + + G D ++ L
Sbjct: 349 KEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNIL 408
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I+ G+ G +D+A+ +F M+E+G PD Y VI+ + +G + M + M +
Sbjct: 409 IDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGL 468
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV-PSTGTITSFLEPLCSYGPPHAAM 427
+P+ Y LI G + A E+ EM+ RGI P+T S + LC G A
Sbjct: 469 KPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQ 528
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++ +G + + + L+ GK + M G D Y ++ G
Sbjct: 529 DIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGY 588
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
C G++++ +++ E L KG P+ + Y + + L + A
Sbjct: 589 CRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGA 632
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 175/379 (46%), Gaps = 5/379 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVL-SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
DV N+++K L K D NVL M + GV PD + S V+ S + +A+ +
Sbjct: 153 DVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDL 212
Query: 221 LGRL--EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
L + + G + S N V+ + V A +LF+ M + V+ +V+TY+ I
Sbjct: 213 LHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDAL 272
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K + + E VL+++++ GF PD +T++ +I G G+ + +F M +G PD
Sbjct: 273 CKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDI 332
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
N+ +S+ G E +++ M++ +P++ TY+ L+ G V D L +F
Sbjct: 333 FTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNS 392
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M GIV ++ G AM+++ + ++ G Y ++ S G+
Sbjct: 393 MEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGR 452
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRLVYS 516
+D +++M G D +Y +I G C G L A ++ E + +G P+ + ++
Sbjct: 453 LADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFN 512
Query: 517 KLSNKLLASNKLESAYNLF 535
+ N L ++ A ++F
Sbjct: 513 SIINSLCKEGRVVEAQDIF 531
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 176/403 (43%), Gaps = 14/403 (3%)
Query: 147 VLFFNWAIKH---PNVA-KDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
V FN + P VA V +YN+++ R + K G+ D+ +
Sbjct: 99 VALFNRICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVAN 158
Query: 203 IVMDSFIRAGQVYKAIQ-MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-- 259
I++ A + A+ +L R+ + G++ D S + VL LC+ A L ++M
Sbjct: 159 ILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVK 218
Query: 260 -KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
G NV++YN VI G+ + G+V + + E++ +G PD +T+S I+ L +A +
Sbjct: 219 KSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAM 278
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
D A V M G PD YN +I Y +G + E ++ M+ P++ T
Sbjct: 279 DKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSY 338
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
+S L K K +A E F+ M +G P T + L + G + ++ G
Sbjct: 339 MSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGI 398
Query: 439 KLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
+ Y +L + +GK GM+ + ++ +MQE G D Y VIA +G+L +
Sbjct: 399 VADHSVYNIL---IDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLAD 455
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
A+ + + G P +VY+ L L A L ++
Sbjct: 456 AMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEM 498
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 117/279 (41%), Gaps = 3/279 (1%)
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
L V TYNI++ + + + + G D + + L++ L A R DDA+
Sbjct: 116 LPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVN 175
Query: 324 VF-DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM--SSYNCEPNMDTYTRLIS 380
V M E G PDT +Y+ V+ + + M S C PN+ +Y +I
Sbjct: 176 VLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIH 235
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
G + +V+ A +F EM+ +G+VP T +S+++ LC A ++ ++ G +
Sbjct: 236 GFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEP 295
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
Y ++ S G+ ++ EM G D ++ LC G+ + A
Sbjct: 296 DKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFF 355
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ KG P + YS L + A + NLF ++
Sbjct: 356 DSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSME 394
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 155/382 (40%), Gaps = 31/382 (8%)
Query: 96 LLPEERLRGVFLQKLKGKGVIEDAL--WNVNVDLSLDVVGKVVN--------RGNL--SG 143
++P+ G + G + DA+ +N + + L V N GNL +
Sbjct: 433 VMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAK 492
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKAL---GR----RKFFDFMCNVLSDMAKEGVNP 196
E + + I PN +N I+ +L GR + FD + ++ G P
Sbjct: 493 ELISEMMSRGIPRPNTV----FFNSIINSLCKEGRVVEAQDIFDLVIHI-------GERP 541
Query: 197 DLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF 256
D+ T + ++D + G++ KA +L + G++ D + + +L C+ + LF
Sbjct: 542 DVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILF 601
Query: 257 NSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
M K V +TY I++ G G+ V +++ E++ G + D T ++ GL R
Sbjct: 602 REMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRN 661
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
D+AI +F + + N +I V +E + + +S+ PN TY
Sbjct: 662 NCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTY 721
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
+I+ LLK V +A +F M G PS+ + + + L G A K
Sbjct: 722 GVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDG 781
Query: 436 VGCKLSLTAYKLLLRRLSGFGK 457
L + L+L S GK
Sbjct: 782 KTISLEASTASLMLSLFSRKGK 803
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 110/263 (41%), Gaps = 13/263 (4%)
Query: 111 KGKGVIEDALWNVNVDLSLDVVGKVVN---RGNLSGEAMVLFFNWAIKHPNVAKDVKSYN 167
K GV+ DA+ +V ++ + +++ R + ++LF K V +Y
Sbjct: 561 KAFGVL-DAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSK--GVKPTTITYG 617
Query: 168 VIVKAL---GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+I+ L GR MC+ +M + G D+ T I++ R +AI + +L
Sbjct: 618 IILHGLFNDGRTVGAKKMCH---EMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKL 674
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
+KF+ +N ++ + + A+ LF+S+ L N TY ++I+ K G V
Sbjct: 675 GAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSV 734
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E + + + G +P S + +I L G I A + K + + + +
Sbjct: 735 EEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLM 794
Query: 344 ISNYISVGDFDECMKYYKGMSSY 366
+S + G + E +K M +
Sbjct: 795 LSLFSRKGKYREQIKSLPAMYQF 817
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 172/381 (45%), Gaps = 6/381 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ DV +YN ++KA R+ +L+ M KEG+ P T + ++ ++ R G + +A
Sbjct: 241 LSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQAT 300
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISG 276
++ + FG + D + NV+ LCQ V A L + M+ V +V+TYN ++
Sbjct: 301 NVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDA 360
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K + + +L+E+ +G +T + +++GL R G++++A+ M E+G PD
Sbjct: 361 CFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPD 420
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT--RLISGLLKSRKVADALEV 394
YN +I Y + + M + MDT+T L+ L K ++ +A E+
Sbjct: 421 VITYNTLIDAYCKARNVAKAFVLMDEMVRSGLK--MDTFTLNTLLYNLCKEKRYEEAEEL 478
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
RG VP + + + P A+ ++ + K S+ Y L++ L
Sbjct: 479 LRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCT 538
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK +D +E+ + G D Y +I C G LE A + L F P +
Sbjct: 539 IGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVT 598
Query: 515 YSKLSNKLLASNKLESAYNLF 535
+ L N L KLE A LF
Sbjct: 599 CNTLMNGLCLHGKLEKAIKLF 619
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 181/409 (44%), Gaps = 37/409 (9%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V + ++N++VK L R + L M +EG+ PD+ T + ++D++ +A V KA
Sbjct: 382 VKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAF 441
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ + GLK D +LN +L+ LC+ A L S + + + ++Y V++ +
Sbjct: 442 VLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAY 501
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K + + E+ +P T++ LI+GL G++ +AI+ + + +KG PD
Sbjct: 502 FKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDD 561
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I Y GD ++ +++ M +P++ T L++GL K+ A+++FE
Sbjct: 562 TTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFES 621
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
++G T + ++ LC G A+ + G + Y ++L LS G+
Sbjct: 622 WAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGR 681
Query: 458 CGMLLDLWHEMQESG-------YP-----------------------------SDGEIYE 481
++ H++ ESG YP D E Y
Sbjct: 682 SEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYN 741
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
+ LC GQL+ A V++E ++KG Y L L+ K ++
Sbjct: 742 KSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQKRQT 790
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 178/420 (42%), Gaps = 39/420 (9%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMC--NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
+V +++ N ++ AL R +V + ++P+ T ++++ + G +
Sbjct: 168 HVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLA 227
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
A+ L ++ FGL D + N +L C++ +G A +L MK + + TYN ++
Sbjct: 228 DALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLV 287
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID--------------- 319
S +++LG + + V++ + A GF PD T++ L GL +AG++D
Sbjct: 288 SAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIV 347
Query: 320 ---------------------DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
DA+ + + M++KG +N V+ G +E +
Sbjct: 348 SPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALG 407
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
K M+ P++ TY LI K+R VA A + +EM+ G+ T T+ + L LC
Sbjct: 408 RLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLC 467
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
A + + + G +Y ++ K L LW EM +
Sbjct: 468 KEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIY 527
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y +I GLC IG+L A+ + E ++KG P Y+ + + LE A+ K+
Sbjct: 528 TYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKM 587
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 195/472 (41%), Gaps = 48/472 (10%)
Query: 113 KGVIEDALWNVNV----DLSLDVVG-----KVVNRGNLSGEAMVLFFNWAIKHPNVAKDV 163
KG + DAL ++ LS DVV K R + GEA L +K +A
Sbjct: 223 KGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLAR--MKKEGIAPTR 280
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+YN +V A R + NV+ M G PDL T +++ +AG+V +A ++
Sbjct: 281 ATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDE 340
Query: 224 LEDFGL-KFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+E + D + N ++ + A +L M+ K V +++T+NIV+ G + G
Sbjct: 341 MEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREG 400
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEG------------------------------ 311
Q+ E LK + EG +PD +T++ LI+
Sbjct: 401 QLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLN 460
Query: 312 -----LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
L + R ++A E+ + ++G PD +Y V++ Y + + + MS
Sbjct: 461 TLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKR 520
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
P++ TY LI GL K+ +A++ E++ +G+VP T + C G A
Sbjct: 521 KLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKA 580
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ K + K + L+ L GK + L+ E G D Y +I
Sbjct: 581 FQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQA 640
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
LC G ++ A+ + +G P Y+ + + L + + E A N+ K+
Sbjct: 641 LCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKL 692
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 146/337 (43%), Gaps = 19/337 (5%)
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL--FNSMKG 261
++ SF R G V ++Q + N VL L + +SL F S+
Sbjct: 159 LLHSFRRRGHVRPSLQ---------------AANAVLSALARSPSTSPQASLDVFRSLIA 203
Query: 262 KVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
L N T+N+++ G + + L + G SPD +T++ L++ R G + +
Sbjct: 204 LRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGE 263
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A + MK++G P YN ++S Y +G + + M+++ EP++ TY L +
Sbjct: 264 ARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAA 323
Query: 381 GLLKSRKVADALEVFEEMLDRGIV-PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
GL ++ KV +A ++ +EM IV P T + ++ Y A+ + ++ R G K
Sbjct: 324 GLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVK 383
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
SL + ++++ L G+ L M E G D Y +I C + A ++
Sbjct: 384 SSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVL 443
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
M+E +R G + L L + E A L R
Sbjct: 444 MDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLR 480
>gi|224089100|ref|XP_002308636.1| predicted protein [Populus trichocarpa]
gi|222854612|gb|EEE92159.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 184/431 (42%), Gaps = 14/431 (3%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+ AL ++ L ++ V + + S + + F WA K P +N +V LG+
Sbjct: 100 LRTALDRTGIEPELGLIQSVFDHFDSSPKLLHSVFLWAEKKPGFQSSAALFNSMVNFLGK 159
Query: 176 RKFFDFMCNVLSDMAKEGVNPDL---ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
+ F +L D DL +T +I++ + RAG AI+ L +
Sbjct: 160 AREFGSAWCLLLDRIGGNEGGDLVSSDTFAILIRRYTRAGMSEAAIRTFEYASSLDLIHN 219
Query: 233 AES----LNVVLWCLCQRLHVGAASSLFNSMKGK---VLFNVMTYNIVISGWSKLGQVVE 285
+E+ ++L LC+ HV A+ F+ K + +V YNI+++GW + ++
Sbjct: 220 SEAGTSLFEILLDSLCKEGHVRVATDYFDRKVEKDPCWVPSVRIYNILLNGWFRSRKLKH 279
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
ER+ E+ + P +T+ L+EG R R++ AIE+ D MK +G + YN +I
Sbjct: 280 AERLWLEMKKKNVKPSVVTYGTLVEGYSRMRRVERAIELVDEMKREGIKSNAIVYNPIID 339
Query: 346 NYISVGDFDECMKYYKGMSSYNCE--PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
G F E + + + CE P + TY L+ G K+ + A ++ + M+ R +
Sbjct: 340 ALAEAGRFKEVLGMMEHF--FLCEEGPTISTYNSLVKGYCKAGDLVGASKILKMMISREV 397
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T F M +Y K + G Y LLL+ L + + +
Sbjct: 398 FPTPTTYNYFFRHFSKCRKIEEGMNLYTKMIESGYTPDRLTYHLLLKMLCEEERLDLAVQ 457
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ EM+ G D LC + + E A E+ LR+G P L + +L+++
Sbjct: 458 ISKEMRARGCDMDLATSTMFTHLLCKMQRFEEAFAEFEDMLRRGIVPQYLTFHRLNDEFR 517
Query: 524 ASNKLESAYNL 534
E A L
Sbjct: 518 KQGLTELARRL 528
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/388 (20%), Positives = 158/388 (40%), Gaps = 33/388 (8%)
Query: 179 FDFMCNVLSD------------MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
F +CN+L D + + G+ P+L + V D F + ++ ++ + +
Sbjct: 82 FFTLCNILKDPKIQLGPSLRTALDRTGIEPELGLIQSVFDHFDSSPKLLHSVFLWAEKKP 141
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLF----NSMKGKVLFNVMTYNIVISGWSKLGQ 282
G + A N ++ L + G+A L +G L + T+ I+I +++ G
Sbjct: 142 -GFQSSAALFNSMVNFLGKAREFGSAWCLLLDRIGGNEGGDLVSSDTFAILIRRYTRAGM 200
Query: 283 VVEMERVLK-----EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG-CG-P 335
R + +++ + SL F L++ L + G + A + FD EK C P
Sbjct: 201 SEAAIRTFEYASSLDLIHNSEAGTSL-FEILLDSLCKEGHVRVATDYFDRKVEKDPCWVP 259
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
YN +++ + + + M N +P++ TY L+ G + R+V A+E+
Sbjct: 260 SVRIYNILLNGWFRSRKLKHAERLWLEMKKKNVKPSVVTYGTLVEGYSRMRRVERAIELV 319
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
+EM GI + ++ L G + M + +++ Y L++ G+
Sbjct: 320 DEMKREGIKSNAIVYNPIIDALAEAGRFKEVLGMMEHFFLCEEGPTISTYNSLVK---GY 376
Query: 456 GKCGMLLD----LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
K G L+ L + +P+ Y Y ++E + + + + G+ P
Sbjct: 377 CKAGDLVGASKILKMMISREVFPTPT-TYNYFFRHFSKCRKIEEGMNLYTKMIESGYTPD 435
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKIK 539
RL Y L L +L+ A + ++++
Sbjct: 436 RLTYHLLLKMLCEEERLDLAVQISKEMR 463
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 190/423 (44%), Gaps = 52/423 (12%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKA---LGRR----KFFDFMCNVLSDMAKEGVNP 196
EA+ LFF +K DV +Y V+V A +G+ KFF+ +M + G+ P
Sbjct: 278 EALELFFQ--MKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFE-------EMVENGIEP 328
Query: 197 DLETLSIVMDSFIRAGQVYKAIQML-------------------------GRLEDFGLKF 231
++ T ++++D F + G++ + ++ML G +ED
Sbjct: 329 NVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVL 388
Query: 232 DAESLNVV---------LWC-LCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
D+ LN V L C C++ + A +L N M + K+ N++TYN +I G K
Sbjct: 389 DSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKA 448
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
V R+ ++ +GF PD TF I+ L + G+++ A +VF+++KEK + Y
Sbjct: 449 RVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLY 508
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
A+I Y F + +K M C PN T+ L+ GL K KV DA+ + + M
Sbjct: 509 TALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGK 568
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
P+ T T +E + A M + GC+ ++ Y ++ G+
Sbjct: 569 FDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLE 628
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
++ +++E G D IY+ ++ IGQL++A V+ G PSR YS L
Sbjct: 629 AEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLK 688
Query: 521 KLL 523
L+
Sbjct: 689 HLI 691
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 174/391 (44%), Gaps = 44/391 (11%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+ H + V SYN + L R D + + DM +GV P+L + + ++++ + G
Sbjct: 146 LTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGN 205
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
V A L FG D+ TY +
Sbjct: 206 VVVAKAYFCGLMKFGFCCDS----------------------------------FTYTSL 231
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
I G+ K+ ++ + +V + + EG + ++++ LI G G+ID+A+E+F MKE GC
Sbjct: 232 ILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGC 291
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
PD Y +++ + VG E +K+++ M EPN+ TYT LI K K+ + +E
Sbjct: 292 FPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGME 351
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK--KARKVGCKLSLTAYKLLLRR 451
+ ML++G+V S + ++ C G A+ + K KV C S T +L
Sbjct: 352 MLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKV-CPNSRTYNEL---- 406
Query: 452 LSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ GF + + + L ++M E+ + Y +I GLC +++A + ++ GF
Sbjct: 407 ICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGF 466
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P + + + L K+E A+ +F +K
Sbjct: 467 VPDQRTFCAFIDCLCKMGKVEQAHQVFESLK 497
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 183/462 (39%), Gaps = 63/462 (13%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
++K V + ++YN ++ R+K D +L+ M + ++P+L T + ++ +A
Sbjct: 390 SMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKAR 449
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYN 271
V A ++ + G D + + CLC+ V A +F S+K K N Y
Sbjct: 450 VVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYT 509
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I G+ K + + + K ++ EG P+S+TF+ L++GL + G+++DA+ + D M +
Sbjct: 510 ALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKF 569
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
P + Y +I + DFD + M S C+PN+ TYT I + ++ +A
Sbjct: 570 DAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEA 629
Query: 392 LE-----------------------------------VFEEMLDRGIVPSTGTITSFLEP 416
E V M D G PS T + L+
Sbjct: 630 EEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKH 689
Query: 417 LCSYGPPHAAM--------------------------MMYKKARKVGCKLSLTAYKLLLR 450
L M M+++K + GC ++ Y L++
Sbjct: 690 LIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIK 749
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
L + L++ M+ESG I+ +++ C +G E A+ +++ +
Sbjct: 750 GLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLA 809
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYARRLWR 552
Y L L E A +FR + N Y +W+
Sbjct: 810 HLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYN-YDEVVWK 850
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 141/335 (42%), Gaps = 27/335 (8%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M EG P+ T ++++D + G+V A+ ++ + F K + +++ + +
Sbjct: 531 MLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESD 590
Query: 249 VGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
A+ + M NV+TY I + + G+++E E ++ +I EG DS +
Sbjct: 591 FDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDV 650
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI------------------- 348
L+ G G++D A V M + GC P Y+ ++ + I
Sbjct: 651 LVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNIS 710
Query: 349 -------SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+ DF+ ++ M C PN++TY++LI GL K ++ A +F M +
Sbjct: 711 VDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKES 770
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
GI PS S L C G A+ + + L +YKLL+ L G
Sbjct: 771 GISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKA 830
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
+++ + GY D +++ ++ GL G ++
Sbjct: 831 EEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDEC 865
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 116/258 (44%)
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E VL + FS +++ L L R G ID+ +F M G P+ ++N ++
Sbjct: 138 EARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMV 197
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ + +G+ Y+ G+ + + TYT LI G K ++ DA +VFE M G +
Sbjct: 198 NAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCL 257
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
+ + T+ + C G A+ ++ + ++ GC + Y +L+ GK L
Sbjct: 258 RNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKF 317
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
+ EM E+G + Y +I C +G+++ + ++ L KG S + ++ L +
Sbjct: 318 FEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCK 377
Query: 525 SNKLESAYNLFRKIKIAR 542
+E A + +K+ +
Sbjct: 378 RGMMEDAICVLDSMKLNK 395
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 86/175 (49%), Gaps = 3/175 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDF--MCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
D+ S N+ V K DF + + M ++G P++ T S ++ + + A +
Sbjct: 703 DLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFR 762
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQR-LHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
+ +++ G+ N +L C+ +H A L + M+ L ++ +Y +++ G
Sbjct: 763 LFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLF 822
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
+ G + E + + +++ G++ D + + L++GL R G +D+ ++ D M++ GC
Sbjct: 823 EQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGC 877
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 105/265 (39%), Gaps = 31/265 (11%)
Query: 141 LSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
L E MV+ IK + D Y+V+V A G D VL M G P +T
Sbjct: 627 LEAEEMVV----KIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQT 682
Query: 201 LSIVMDSFI-----RAGQ--------------------VYKAIQML-GRLEDFGLKFDAE 234
SI++ I + G ++ I ML ++ + G +
Sbjct: 683 YSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVN 742
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
+ + ++ LC+ H+ A LFN MK + + +N ++S KLG E R+L +
Sbjct: 743 TYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSM 802
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
+ ++ L+ GL G + A E+F ++ G D + ++ + G
Sbjct: 803 MEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYV 862
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRL 378
DEC + M C + DT+T L
Sbjct: 863 DECSQLRDIMEKTGCRLHSDTHTML 887
>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 167/357 (46%), Gaps = 7/357 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ A G + NV M + GV PDL T +I++ +F Q KA+ +
Sbjct: 223 TYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYSKALSYFELM 282
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM---KGKVLFNVMTYNIVISGWSKLG 281
+ ++ D +LN+V+ CL + A +FNSM K + +V+T+ +I +S G
Sbjct: 283 KGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMREKKSECTPDVVTFTSIIHLYSVCG 342
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
QV E ++AEG P+ ++++ LI G ++A F+ +K+ G PD +Y
Sbjct: 343 QVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYT 402
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++++ Y + + + M +PN+ +Y LI + +ADA+++ EM
Sbjct: 403 SLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQE 462
Query: 402 GIVPSTGTITSFLEPL--CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
GI P+ +I + L CS ++ + R G KL+ AY + G+
Sbjct: 463 GIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMR--GIKLNTVAYNAAIGSCMNVGEYD 520
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ L+ M++ +D Y +I+G C + + A+ MEE + S+ VYS
Sbjct: 521 KAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYS 577
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 152/348 (43%), Gaps = 11/348 (3%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
++ ++ RG++ E F W N YN++++ R D + +M
Sbjct: 121 LIKELTQRGSI--EHCNRVFRWLKNQKNYRARNDIYNMMIRLHARHNRTDQARGLFFEMQ 178
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
+ PD+ET + ++++ RAGQ A+ ++ + + + N ++ +
Sbjct: 179 EWRCKPDVETYNAIINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWK 238
Query: 251 AASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A ++ M + V +++T+NI++S + Q + + + PD+ T + +I
Sbjct: 239 EALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYSKALSYFELMKGTHIRPDTTTLNIVI 298
Query: 310 EGLGRAGRIDDAIEVFDTMKEKG--CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
L + + D AIE+F++M+EK C PD + ++I Y G + C + M +
Sbjct: 299 HCLVKLRQYDKAIEIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAEG 358
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
+PN+ +Y LI +A F E+ G P + TS L PH A
Sbjct: 359 LKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKAR 418
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESG 472
++ + ++ K +L +Y L + +G G+L D + EM++ G
Sbjct: 419 QIFDRMKRNKLKPNLVSYNAL---IDAYGSNGLLADAIKILREMEQEG 463
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 144/341 (42%), Gaps = 39/341 (11%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M EG+ P++ + + ++ ++ G +A ++ G + D S +L +
Sbjct: 354 MIAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQK 413
Query: 249 VGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
A +F+ MK K+ N+++YN +I + G + + ++L+E+ EG P+ ++
Sbjct: 414 PHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICT 473
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
L+ GR R V + +G +T AYNA I + ++VG++D+ + YK M
Sbjct: 474 LLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSMRKKK 533
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEML---------------------------- 399
+ + TYT LISG K K +AL EE++
Sbjct: 534 IKTDSVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICAYSKQGQIVEAE 593
Query: 400 -------DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
G P T T+ L+ + A ++++ KL A L+R
Sbjct: 594 STFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEASSIKLDTIACAALMRSF 653
Query: 453 SGFGKCGMLLDLWHEMQESGYP-SDGEIYEYVIAGLCNIGQ 492
+ G+ G +L L M+E P SD +E V A C+I Q
Sbjct: 654 NKGGQPGRVLSLAESMREKEIPFSDTIFFEMVSA--CSILQ 692
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 119/276 (43%), Gaps = 2/276 (0%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V TYN +I+ + GQ ++ +++ P T++ LI G +G +A+ V
Sbjct: 185 DVETYNAIINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVC 244
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
M E G GPD +N ++S + S + + + Y++ M + P+ T +I L+K
Sbjct: 245 KKMTENGVGPDLVTHNIILSAFKSGAQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKL 304
Query: 386 RKVADALEVFEEMLDRG--IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
R+ A+E+F M ++ P T TS + G + G K ++
Sbjct: 305 RQYDKAIEIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIV 364
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
+Y L+ + G ++E++++G+ D Y ++ + A + +
Sbjct: 365 SYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRM 424
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
R P+ + Y+ L + ++ L A + R+++
Sbjct: 425 KRNKLKPNLVSYNALIDAYGSNGLLADAIKILREME 460
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 121/301 (40%), Gaps = 4/301 (1%)
Query: 243 LCQRLHVGAASSLFNSMKGKVLFNVMT--YNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
L QR + + +F +K + + YN++I ++ + + + E+ P
Sbjct: 125 LTQRGSIEHCNRVFRWLKNQKNYRARNDIYNMMIRLHARHNRTDQARGLFFEMQEWRCKP 184
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
D T++ +I GRAG+ A+ + D M P + YN +I+ S G++ E +
Sbjct: 185 DVETYNAIINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVC 244
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
K M+ P++ T+ ++S + + AL FE M I P T T+ + L
Sbjct: 245 KKMTENGVGPDLVTHNIILSAFKSGAQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKL 304
Query: 421 GPPHAAMMMYKKAR--KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
A+ ++ R K C + + ++ S G+ ++ M G +
Sbjct: 305 RQYDKAIEIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIV 364
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y +I G A L E + GF P + Y+ L N S K A +F ++
Sbjct: 365 SYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRM 424
Query: 539 K 539
K
Sbjct: 425 K 425
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/194 (18%), Positives = 84/194 (43%), Gaps = 13/194 (6%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M G PD+ T + ++D++ A KA + +E +K D + ++ +
Sbjct: 599 MKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEASSIKLDTIACAALMRSFNKGGQ 658
Query: 249 VGAASSLFNSMKGK-------VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
G SL SM+ K + F +++ ++ W +++ +++ G
Sbjct: 659 PGRVLSLAESMREKEIPFSDTIFFEMVSACSILQDWRTAVDMIKYIEPSLPVISSG---- 714
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+ + LG++G+I+ +++F M G + N Y+ ++ N +S G++ + ++ +
Sbjct: 715 --CLNQFLHSLGKSGKIETMLKLFFKMLASGADVNLNTYSILLKNLLSSGNWRKYLEVLQ 772
Query: 362 GMSSYNCEPNMDTY 375
M P+ + Y
Sbjct: 773 WMEDAGIHPSKEMY 786
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 74/384 (19%), Positives = 135/384 (35%), Gaps = 111/384 (28%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K + ++ SYN ++ A G +L +M +EG+ P++ ++ ++ + R +
Sbjct: 424 MKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAACGRCSR 483
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
K +L E G+K + + N + A L+ SM K K+ + +TY +
Sbjct: 484 KVKIDTVLTAAEMRGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYTV 543
Query: 273 VIS-----------------------------------GWSKLGQVVEMERVLKEIVAEG 297
+IS +SK GQ+VE E + + G
Sbjct: 544 LISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSG 603
Query: 298 FSP-----------------------------------DSLTFSFLIEGLGRAGRIDDAI 322
P D++ + L+ + G+ +
Sbjct: 604 CYPDVVTYTAMLDAYNAAENWEKAYALFEEMEASSIKLDTIACAALMRSFNKGGQPGRVL 663
Query: 323 EVFDTMKEK--------------GCGPDTNAYNAV-ISNYIS------------------ 349
+ ++M+EK C + AV + YI
Sbjct: 664 SLAESMREKEIPFSDTIFFEMVSACSILQDWRTAVDMIKYIEPSLPVISSGCLNQFLHSL 723
Query: 350 --VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
G + +K + M + + N++TY+ L+ LL S LEV + M D GI PS
Sbjct: 724 GKSGKIETMLKLFFKMLASGADVNLNTYSILLKNLLSSGNWRKYLEVLQWMEDAGIHPSK 783
Query: 408 ---GTITSFLEPLCSYGPPHAAMM 428
I+SF + C G +AA++
Sbjct: 784 EMYHDISSFSQKCC--GNENAAVI 805
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 187/404 (46%), Gaps = 4/404 (0%)
Query: 136 VNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN 195
+ +G+L E+ ++ ++H + +V +YNV++ L R VL +MA +
Sbjct: 234 IKKGDL--ESGFRLWSQMLRH-GLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMV 290
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
PD T SI+ D R G + + G+K A + +++L LC+ + A +
Sbjct: 291 PDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEV 350
Query: 256 FNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
++ +L + YN +I+G+ ++G + + +++ + PD +T++ LI GLG+
Sbjct: 351 LQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGK 410
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
RI +A ++ M++ G P +N +I Y G ++C M +PN+ +
Sbjct: 411 VERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVS 470
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y +++ K+ K+ +A+ + ++M + ++P + ++ G A M+ +K +
Sbjct: 471 YGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMK 530
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G S+ Y LL++ L + +L ++ G D Y +I+ C +
Sbjct: 531 SSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTD 590
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
A+ + +E + G PS Y L + L + ++ NL++++
Sbjct: 591 RALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQM 634
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 171/381 (44%), Gaps = 36/381 (9%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A + SYNV++ L + + +M ++ V P+ T + ++D I+ G + +
Sbjct: 185 APNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFR 244
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWS 278
+ ++ GLK + + NV+L LC+ +G +++ + M K++ + TY+I+ G S
Sbjct: 245 LWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHS 304
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
+ G M + +E V +G + T S L+ GL + G+I A EV T+ G T
Sbjct: 305 RTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTV 364
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
YN +I+ Y +GD + ++ M S P+ TY LI+GL K ++ +A ++ EM
Sbjct: 365 IYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEM 424
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
G+ PS T + ++ +YG R KC
Sbjct: 425 EKNGVNPSVETFNTLID---AYG-----------------------------RAGQLEKC 452
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
++L +MQE G + Y ++ C G++ AV ++++ K P VY+ +
Sbjct: 453 FIILS---DMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAI 509
Query: 519 SNKLLASNKLESAYNLFRKIK 539
+ + + A+ L K+K
Sbjct: 510 IDAYIECGSTDQAFMLAEKMK 530
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 168/378 (44%), Gaps = 41/378 (10%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y+++ R M ++ + K+GV T SI+++ + G++ KA ++L L
Sbjct: 295 TYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTL 354
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQV 283
+ GL N ++ CQ + A S+F MK +++ + +TYN +I+G K+ ++
Sbjct: 355 VNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERI 414
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD------- 336
E ++ E+ G +P TF+ LI+ GRAG+++ + M+EKG P+
Sbjct: 415 TEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSI 474
Query: 337 ----------------------------TNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
YNA+I YI G D+ + M S
Sbjct: 475 VNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGV 534
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P++ TY LI GL K ++++A E+ + + + G+ P + + + C A+
Sbjct: 535 PPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALE 594
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ K+ K G K S Y++L L G G+ + +L+ +M + IY ++
Sbjct: 595 LEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYA 654
Query: 489 NIGQLENAVLVMEESLRK 506
G+ E+ V E+LRK
Sbjct: 655 KCGE-ESKV----EALRK 667
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 130/270 (48%), Gaps = 1/270 (0%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF-SPDSLTFSFLIEGLGRAGRIDDAIEV 324
+ T+N + G + E +L+ + +G +P++ +++ +I GL +AG DA+++
Sbjct: 151 DTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKL 210
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
FD M EK P+ YN +I +I GD + + + M + +PN+ TY L+SGL +
Sbjct: 211 FDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCR 270
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+ ++ + V +EM R +VP T + + G + +++++ K G K+
Sbjct: 271 AGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYT 330
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
+LL L GK ++ + SG IY +I G C IG LE A + ++
Sbjct: 331 CSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMK 390
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
+ P + Y+ L N L ++ A++L
Sbjct: 391 SRLIRPDHITYNALINGLGKVERITEAHDL 420
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 160/349 (45%), Gaps = 16/349 (4%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLE-DFGLKFDAESLNVVLWCLCQRLHVGAASS 254
PD T + + + + AG + +A+ ML R+ D +A S NVV+ L + A
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVK 209
Query: 255 LFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
LF+ M K V+ N +TYN +I G K G + R+ +++ G P+ +T++ L+ GL
Sbjct: 210 LFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLC 269
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD-------FDECMKYYKGMSSY 366
RAGR+ + V D M + PD Y+ + + GD F+E +K + +Y
Sbjct: 270 RAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAY 329
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
C + L++GL K K++ A EV + +++ G++ +T + + C G A
Sbjct: 330 TC-------SILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGA 382
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
++++ + + Y L+ L + DL EM+++G E + +I
Sbjct: 383 FSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDA 442
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
GQLE +++ + KG P+ + Y + N + K+ A +
Sbjct: 443 YGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAIL 491
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 38/291 (13%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D +YN ++ LG+ + +++ +M K GVNP +ET + ++D++ RAGQ+ K
Sbjct: 394 IRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCF 453
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------KGKVLFN------ 266
+L +++ GLK + S ++ C+ + A ++ + M G ++N
Sbjct: 454 IILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAY 513
Query: 267 ------------------------VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
++TYN++I G K Q+ E E +L + G +PD
Sbjct: 514 IECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDV 573
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
++++ LI D A+E+ M + G P Y + S+ G E Y+
Sbjct: 574 ISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQ 633
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
M + P Y ++ K + + + +EM D+GI + G TS
Sbjct: 634 MLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGI--AVGDYTSM 682
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 1/224 (0%)
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE-PNMDT 374
GR D F+ + PDT +N + + GD DE + + M PN +
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y +I+GL K+ DA+++F+EM ++ +VP+ T + ++ G + ++ +
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
+ G K ++ Y +LL L G+ G + EM DG Y + G G +
Sbjct: 251 RHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQ 310
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ + EES++KG S L N L K+ A + + +
Sbjct: 311 TMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTL 354
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 71/180 (39%), Gaps = 36/180 (20%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K V + +YN+++K L ++ Q
Sbjct: 529 MKSSGVPPSIVTYNLLIKGLCKQS-----------------------------------Q 553
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
+ +A ++L L ++GL D S N ++ C R + A L M K + + TY +
Sbjct: 554 ISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRM 613
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+ S G+V EME + ++++ + P S ++ +++ + G + M +KG
Sbjct: 614 LFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKG 673
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 176/371 (47%), Gaps = 7/371 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y ++ LG++ + + ++ +M K G++P+++ + V+D+ + +A+ +L ++
Sbjct: 276 TYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQM 335
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASS-LFNSMKGKVLFNVMTYNIVISGWSKLGQV 283
G D + N ++ LC HV A L +++ ++ N ++Y +I G+ G++
Sbjct: 336 FASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGEL 395
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ +L E++ G +PD +TF LI GL AG++ +A+ V + M E+ PD N YN +
Sbjct: 396 MAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVL 455
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS + M N +P+ Y LI G ++S + DA ++FE M +G+
Sbjct: 456 ISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGV 515
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML-- 461
P + + ++ C +G A++ RKVGC Y + +SG+ K G L
Sbjct: 516 RPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTV---ISGYAKQGNLNG 572
Query: 462 -LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L +M + + Y +I G C G ++A + + P+ + Y+ L
Sbjct: 573 ALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIG 632
Query: 521 KLLASNKLESA 531
L +K+ A
Sbjct: 633 SLFKKDKVLRA 643
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 163/394 (41%), Gaps = 37/394 (9%)
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL-EDFGLKFDAESLN 237
FD + + L M+ G P L ++ ++ AG + KA M RL E +G + N
Sbjct: 114 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCN 173
Query: 238 VVLWCLCQRLHVGAASSLFNSMKGK----------------------------------- 262
+L L ++ A L++ M G+
Sbjct: 174 RLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGA 233
Query: 263 -VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
+ +V+ YN++I G+ + G + +L E+ A+GF P +T+ LI LG+ G ++
Sbjct: 234 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKI 293
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+F M+++G P+ YN+VI + M K M + C+P++ T+ LI+G
Sbjct: 294 GSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITG 353
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L V A E + R + P+ + T + C G AA + + G
Sbjct: 354 LCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPD 413
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ + L+ L GK L + +M E D IY +I+GLC L A ++E
Sbjct: 414 VVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILE 473
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
E L K P VY+ L + + S L A +F
Sbjct: 474 EMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 507
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 166/406 (40%), Gaps = 60/406 (14%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L ++ G+G D + + L V GKV EA+++ + V DV
Sbjct: 401 LLMEMMGRGHTPDVVTFGALIHGLVVAGKV-------SEALIV--REKMTERQVFPDVNI 451
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YNV++ L ++ N+L +M ++ V PD + ++D FIR+ + A ++ +E
Sbjct: 452 YNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFME 511
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVE 285
G++ D +++ N +I G+ + G + E
Sbjct: 512 HKGVRPD----------------------------------IVSCNAMIKGYCQFGMMSE 537
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+ + G PD T++ +I G + G ++ A+ M ++ C P+ Y+++I+
Sbjct: 538 AILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLIN 597
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
Y GD D + M + PN+ TYT LI L K KV A FE ML P
Sbjct: 598 GYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSP 657
Query: 406 STGTITSFLEPLCSYGP---------------PHAAMMMYKK-ARKVGCKLSLTAYKLLL 449
+ T+ + L S P A ++++KK +G + +AY ++
Sbjct: 658 NDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRN-SAYNAII 716
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
L LD + M + GY + + ++ G C++G+ N
Sbjct: 717 FSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSMN 762
>gi|18396782|ref|NP_566222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|79312733|ref|NP_001030630.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546763|sp|Q9M8W9.2|PP211_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04130, mitochondrial; Flags: Precursor
gi|332640519|gb|AEE74040.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332640520|gb|AEE74041.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 508
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 189/421 (44%), Gaps = 4/421 (0%)
Query: 125 VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCN 184
V+LS +V K+++R + + WA +Y++ V LG+ K +D M
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 142
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ M + + L T++ +M F AG+ +A+ + RL +FGL+ + ES+N++L LC
Sbjct: 143 FVERMRGDKL-VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLC 201
Query: 245 QRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
+ V A + +K + N T+NI I GW K +V E ++E+ GF P ++
Sbjct: 202 KEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVIS 261
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
++ +I + E+ M+ G P++ Y ++S+ + +F+E ++ M
Sbjct: 262 YTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFE-EMLDRGIVPSTGTITSFLEPLCSYGPP 423
C+P+ Y LI L ++ ++ +A VF EM + G+ +T T S + C +
Sbjct: 322 RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEE 381
Query: 424 HAAMMMYKKARKVG-CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS-DGEIYE 481
A+ + K+ C + Y+ LLR G + L EM + S D Y
Sbjct: 382 DKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYT 441
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
++I LC E A + EE + + P L ++ N ESA + +K
Sbjct: 442 FLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKTV 501
Query: 542 R 542
+
Sbjct: 502 K 502
>gi|222423065|dbj|BAH19514.1| AT3G04130 [Arabidopsis thaliana]
Length = 508
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 189/421 (44%), Gaps = 4/421 (0%)
Query: 125 VDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCN 184
V+LS +V K+++R + + WA +Y++ V LG+ K +D M
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 142
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ M + + L T++ +M F AG+ +A+ + RL +FGL+ + ES+N++L LC
Sbjct: 143 FVERMRGDKL-VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLC 201
Query: 245 QRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
+ V A + +K + N T+NI I GW K +V E ++E+ GF P ++
Sbjct: 202 KEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVIS 261
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
++ +I + E+ M+ G P++ Y ++S+ + +F+E ++ M
Sbjct: 262 YTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFE-EMLDRGIVPSTGTITSFLEPLCSYGPP 423
C+P+ Y LI L ++ ++ +A VF EM + G+ +T T S + C +
Sbjct: 322 RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEE 381
Query: 424 HAAMMMYKKARKVG-CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS-DGEIYE 481
A+ + K+ C + Y+ LLR G + L EM + S D Y
Sbjct: 382 DKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYT 441
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
++I LC E A + EE + + P L ++ N ESA + +K
Sbjct: 442 FLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKTV 501
Query: 542 R 542
+
Sbjct: 502 K 502
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 204/440 (46%), Gaps = 10/440 (2%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
+ L ++ G + DA S + V K + G+ S EA+ + K + DV
Sbjct: 222 MLLHRMSELGCVPDAF-------SYNTVIKSLCGGSRSQEALDMLLRMT-KGDGCSPDVV 273
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SY +++ L CN+ ++M ++GV P++ T + ++ + +A + KA +L ++
Sbjct: 274 SYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQM 333
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
D ++ D + ++ A+ +F M + L +++T+N ++ K +
Sbjct: 334 FDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRS 393
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E + I +G PD +++S L+ G GR D +F +M + G D++ +N +
Sbjct: 394 KEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNIL 453
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I+ + G DE + + M PN+ TY +I+ L + ++ADA+E +M+ G+
Sbjct: 454 INAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGL 513
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC-KLSLTAYKLLLRRLSGFGKCGMLL 462
P+T S ++ C++G A + + G + ++T + ++ L G+
Sbjct: 514 KPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQ 573
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
D+++ + G D + +I G C +G+++ A V++ + G P + YS L N
Sbjct: 574 DVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGY 633
Query: 523 LASNKLESAYNLFRKIKIAR 542
S +++ LFR++ R
Sbjct: 634 FKSGRIDDGLILFREMLCKR 653
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 196/436 (44%), Gaps = 11/436 (2%)
Query: 105 VFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
+ L+ KG G D + V L + G++ NL FN ++ V +V
Sbjct: 258 MLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNL--------FNEMVQK-GVVPNVV 308
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN IV AL + + D VL M + PD T + ++ + G+ +A +M +
Sbjct: 309 TYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEM 368
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
GL D + N ++ LC+ A+ +F+S+ K ++++Y+I++ G++ G+
Sbjct: 369 TREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRF 428
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
V+M + + G DS F+ LI + G +D+A+ +F M+ +G P+ Y V
Sbjct: 429 VDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATV 488
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I+ +G + M+ M S +PN Y LI G + A E+ EM+D+GI
Sbjct: 489 IAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGI 548
Query: 404 V-PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P+ +S + LC+ G A ++ +G + + + L+ GK
Sbjct: 549 PRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAF 608
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
+ M +G D Y +I G G++++ +++ E L K P+ + YS + + L
Sbjct: 609 GVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGL 668
Query: 523 LASNKLESAYNLFRKI 538
+ + +A +F ++
Sbjct: 669 FRAGRTSAAKKMFHEM 684
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 184/415 (44%), Gaps = 37/415 (8%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ ++N ++ +L + K + +A +G PD+ + SI++ + G+ +
Sbjct: 376 DIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLF 435
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ D G+ D+ N+++ +R + A +F M+G+ V NV+TY VI+ ++
Sbjct: 436 HSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRM 495
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEG----------------------------- 311
G++ + L ++++ G P+++ + LI+G
Sbjct: 496 GRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITF 555
Query: 312 -------LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
L GR+ +A +VF+ + G PD +N++I Y VG D+ M
Sbjct: 556 FSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMV 615
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
S EP++ TY+ LI+G KS ++ D L +F EML + + P+T T + L+ L G
Sbjct: 616 SAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTS 675
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
AA M+ + + G +S++ Y ++L+ L + L+H++ + I +I
Sbjct: 676 AAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMI 735
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
L + + E A + G P+ Y + LL +E A +F ++
Sbjct: 736 HALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSME 790
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 154/339 (45%), Gaps = 7/339 (2%)
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ T I+MD RA + RL GL+ D N L CLC A S+
Sbjct: 165 VHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLL 224
Query: 258 SMKGKV--LFNVMTYNIVI---SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
++ + + +YN VI G S+ + ++M +L+ +G SPD ++++ +I GL
Sbjct: 225 HRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDM--LLRMTKGDGCSPDVVSYTMVIHGL 282
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
G I A +F+ M +KG P+ YN+++ D+ + M + +P+
Sbjct: 283 FMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDE 342
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
TYT +I G + +A ++F+EM G++P T S ++ LC + A ++
Sbjct: 343 VTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHS 402
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
G K + +Y +LL + G+ + +L+H M ++G +D + +I G
Sbjct: 403 IATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGM 462
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
++ A+L+ E +G P+ + Y+ + L +L A
Sbjct: 463 MDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADA 501
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 144/335 (42%), Gaps = 39/335 (11%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+++F ++ V+ +V +Y ++ AL R LS M G+ P+
Sbjct: 465 EALLIF--TEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHS 522
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGL-KFDAESLNVVLWCLCQR-------------LHV 249
++ F G + KA +++ + D G+ + + + ++ LC +H+
Sbjct: 523 LIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHI 582
Query: 250 GAASSLF--NSM-KGKVLF--------------------NVMTYNIVISGWSKLGQVVEM 286
G +F NS+ G L +V+TY+ +I+G+ K G++ +
Sbjct: 583 GDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDG 642
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
+ +E++ + P ++T+S +++GL RAGR A ++F M E G + Y ++
Sbjct: 643 LILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQG 702
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
DE + + + + N + + +I L K ++ +A ++F + G+VP+
Sbjct: 703 LCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPN 762
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
T + L G A +M+ K GC S
Sbjct: 763 ASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPS 797
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 101/230 (43%), Gaps = 1/230 (0%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
G PD+ T + ++D + G++ KA +L + G + D + + ++ + +
Sbjct: 583 GDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDG 642
Query: 253 SSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
LF M K V +TY++V+ G + G+ +++ E++ G + T++ +++G
Sbjct: 643 LILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQG 702
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
L R D+AI +F + + N +I V +E + +S+ PN
Sbjct: 703 LCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPN 762
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
TY +I LLK V +A +F M G PS+ + + L G
Sbjct: 763 ASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKG 812
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 174/374 (46%), Gaps = 1/374 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V ++ YN ++ A + + + +L++M +GV PD+ T + ++ + + G Y+A+
Sbjct: 196 VVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEAL 255
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
+ ++E G+ D S N +++ C+ + A +F +K + N +TY +I G+
Sbjct: 256 SVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEIKDAIP-NHVTYTTLIDGYC 314
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K + E R+ + +VA+G P +T++ ++ L GRI DA ++ M E+ D+
Sbjct: 315 KANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSV 374
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
N +I+ Y +GD + +K+ M PN TY LI G K+ ++ A E+ M
Sbjct: 375 TCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGM 434
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
LD G P+ T + ++ C A + + + G L+++ Y+ L+RRL +
Sbjct: 435 LDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKIERI 494
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
L + M+ G D IY + G A ++EE R+ + +Y
Sbjct: 495 ECAEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNTNAASDMLEEMARRRLMITVKIYRCF 554
Query: 519 SNKLLASNKLESAY 532
S + NK+ +
Sbjct: 555 SALDASQNKVSQMF 568
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 166/386 (43%), Gaps = 20/386 (5%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV-------------- 194
FF WA P+ + S ++ L + + F VL MA+ +
Sbjct: 64 FFKWAQSIPHYTHSLHSSWSMIHMLTKHRHFKTAQQVLDKMAQREILSSPSVLTSLVRIH 123
Query: 195 -NPDLET--LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
+P++ + LS ++ + ++ + A+Q+ ++ LK + V++ L +
Sbjct: 124 DDPEVNSHVLSWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSM 183
Query: 252 ASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
++ M + V+ N+ YN +I SK V E +L E+ +G PD T++ LI
Sbjct: 184 VWKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIA 243
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
+ G +A+ V D M+ +G D +YN++I + G E M+ + + + P
Sbjct: 244 LYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEIK--DAIP 301
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
N TYT LI G K+ + +AL + E M+ +G+ P T S L LCS G A +
Sbjct: 302 NHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLL 361
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
+ + + L+ G L +M E+G + Y+ +I G C
Sbjct: 362 HEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKT 421
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYS 516
+LE+A ++ L GF P+ YS
Sbjct: 422 SELESAKELLFGMLDAGFSPNYRTYS 447
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 113/259 (43%), Gaps = 4/259 (1%)
Query: 282 QVVEMERVLKEIVAEGFSPD--SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
+++ VL +V P+ S S+++ ++ DA++VF+ M P +A
Sbjct: 108 EILSSPSVLTSLVRIHDDPEVNSHVLSWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHA 167
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
++++ + G K YK M PN+ Y LI KSR V A + EM
Sbjct: 168 CTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEME 227
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
+G+VP T + + C G + A+ + K + G L + +Y L+ GK
Sbjct: 228 VKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMR 287
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ ++ E++++ + Y +I G C + E A+ + E + KG P + Y+ +
Sbjct: 288 EAMRMFGEIKDA--IPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSIL 345
Query: 520 NKLLASNKLESAYNLFRKI 538
KL + ++ A L ++
Sbjct: 346 RKLCSDGRIRDANKLLHEM 364
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 70/176 (39%)
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
E N + ++ KS+ DA++VFE+M + P T + L G
Sbjct: 127 EVNSHVLSWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWK 186
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+YK+ + G ++ Y L+ S + +EM+ G D Y +IA C
Sbjct: 187 VYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYC 246
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
G A+ V ++ R+G + Y+ L K+ A +F +IK A N
Sbjct: 247 KKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEIKDAIPN 302
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 174/381 (45%), Gaps = 6/381 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D +YN ++ A R+ +L+ M KEG+ P T + ++ ++ R G + +A
Sbjct: 240 LSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQAT 299
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISG 276
++ + FG + D + NV+ LCQ V A L + M+ G V +V+TYN ++
Sbjct: 300 DVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDA 359
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K + + +L+E+ +G +T + +++GL R G++++A+ + M E+G PD
Sbjct: 360 CFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPD 419
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT--RLISGLLKSRKVADALEV 394
YN +I G+ + M + MDT+T L+ L K ++ +A E+
Sbjct: 420 VITYNTLIDASCKAGNVAKAFVLMDEMVRSGLK--MDTFTLNTLLYNLCKEKRYEEAEEL 477
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
RG VP + + + P A+ ++ + K S++ Y L++ LS
Sbjct: 478 LRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLST 537
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK +D +E+ E G D Y +I C G LE A + + F P +
Sbjct: 538 MGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVT 597
Query: 515 YSKLSNKLLASNKLESAYNLF 535
+ L N L +LE A LF
Sbjct: 598 CNTLMNGLCLYGRLEKAMKLF 618
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 185/414 (44%), Gaps = 37/414 (8%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ V + ++N+IVK L R + L M +EG+ PD+ T + ++D+ +AG
Sbjct: 376 MREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGN 435
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
V KA ++ + GLK D +LN +L+ LC+ A L + + + + ++Y
Sbjct: 436 VAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGT 495
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
V++ + K + + E++ +P T++ LI+GL G++ +AI+ + + E G
Sbjct: 496 VMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMG 555
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD YN +I Y GD ++ +++ M + +P++ T L++GL ++ A+
Sbjct: 556 LVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAM 615
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
++FE +++G T + ++ LC A+ + G + + Y +LL L
Sbjct: 616 KLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSAL 675
Query: 453 SGFGKCGMLLDLWHEMQESG-------YPS-----------------------------D 476
S G+ + H++ ESG YPS D
Sbjct: 676 SEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDD 735
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
E Y I LC GQL+ A V++E ++KG Y L L+ K ++
Sbjct: 736 QESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQKRQT 789
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 200/441 (45%), Gaps = 17/441 (3%)
Query: 113 KGVIEDALWNVN----VDLSLDVV--GKVVN---RGNLSGEAMVLFFNWAIKHPNVAKDV 163
KG + DAL ++ LS D V ++N R + GEA L +K +
Sbjct: 222 KGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLAR--MKKEGIVPTR 279
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+YN +V A R + +V+ M G PDL T +++ +AG+V +A ++
Sbjct: 280 ATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDE 339
Query: 224 LEDFGL-KFDAESLNVVL-WCL-CQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSK 279
+E G+ D + N ++ C CQR A +L M+ K V +++T+NI++ G +
Sbjct: 340 MEQLGIVSPDVVTYNTLVDACFKCQR--SSDALNLLEEMREKGVKSSLVTHNIIVKGLCR 397
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
GQ+ E L+ + EG +PD +T++ LI+ +AG + A + D M G DT
Sbjct: 398 EGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFT 457
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
N ++ N ++E + + P+ +Y +++ K K AL +++EM+
Sbjct: 458 LNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMI 517
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
R + PS T + ++ L + G A+ + ++G T Y +++ G
Sbjct: 518 KRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLE 577
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
++M E+ + D ++ GLC G+LE A+ + E + KG + Y+ L
Sbjct: 578 KAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLI 637
Query: 520 NKLLASNKLESAYNLFRKIKI 540
L N +++A F +++
Sbjct: 638 QALCKDNDVDTALRFFADMEV 658
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 153/338 (45%), Gaps = 5/338 (1%)
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFG-LKFDAESLNVVLWCLCQRLHVGAASSL--FNSMK 260
+ ++ R + A Q+L G ++ ++ N VL L + +SL F+S+
Sbjct: 142 ALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLI 201
Query: 261 GKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
L N T+N+++ G + + L ++ G SPD++T++ L+ R G +
Sbjct: 202 ALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLG 261
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
+A + MK++G P YN ++S Y +G + + M+++ EP++ TY L
Sbjct: 262 EARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLA 321
Query: 380 SGLLKSRKVADALEVFEEMLDRGIV-PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
+GL ++ KV +A ++ +EM GIV P T + ++ A+ + ++ R+ G
Sbjct: 322 AGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGV 381
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
K SL + ++++ L G+ L M E G D Y +I C G + A +
Sbjct: 382 KSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFV 441
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
+M+E +R G + L L + E A L R
Sbjct: 442 LMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLR 479
>gi|302142966|emb|CBI20261.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 171/399 (42%), Gaps = 43/399 (10%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIK---HPNVAKDVKSYNVIVKA 172
IE AL + L+ D+V V+ R +FFNWA + + +N I+
Sbjct: 105 IEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGIESGYSPGCGVHNEILDI 164
Query: 173 LGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
LGR + F M + +M+K + T ++++ + A + +A
Sbjct: 165 LGRMRRFHEMTQLFDEMSKRKGLVNERTFGVLLNRYAAAHKTEEA--------------- 209
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
A +F KG + + N++++GW LG + E +R +
Sbjct: 210 -------------------AVKIFYKRKGAW---IRSMNVILNGWCVLGSLREAKRFWND 247
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
I+ PD T+ I L +AG++ A+++F M EKGC PD N +I
Sbjct: 248 IITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKR 307
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
E ++ + M+ +C+P++ TY LI L K ++ E+ ++M +G +P+ T
Sbjct: 308 IPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGY 367
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
L+ S P + ++ + GC+++ Y L+L+ +G L EM+ +G
Sbjct: 368 LLK---STKKPEEVPGILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNG 424
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
D Y +I GL + G++++A+ ++ G P
Sbjct: 425 MGPDQRTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPE 463
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 105/224 (46%), Gaps = 4/224 (1%)
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
+D+ PD T I ++S +AG++ A+++ + + G D N ++ LC +
Sbjct: 246 NDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFK 305
Query: 247 LHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
+ A + M + +V TYN +I K+ + ++ +L ++ +G P++ T+
Sbjct: 306 KRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTY 365
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+L++ + ++ + + M+ GC +++ YN ++ Y+ G + M
Sbjct: 366 GYLLKSTKKP---EEVPGILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMER 422
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
P+ TYT +I GL ++ DAL F++M G+VP T
Sbjct: 423 NGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPEPRT 466
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/271 (19%), Positives = 112/271 (41%), Gaps = 43/271 (15%)
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA-IEVFDTM 328
+N ++ ++ + EM ++ E+ + TF L+ A + ++A +++F
Sbjct: 158 HNEILDILGRMRRFHEMTQLFDEMSKRKGLVNERTFGVLLNRYAAAHKTEEAAVKIF--Y 215
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
K KG + N +++ + +G E +++ + + C+P+ TY I+ L K+ K+
Sbjct: 216 KRKGAW--IRSMNVILNGWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKL 273
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+ A+++F+ M ++G P ++ LC +KK
Sbjct: 274 STAVKLFQAMWEKGCNPDVAICNCIIDALC-----------FKK---------------- 306
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L++ EM E D Y +I LC I + E ++++ +KG
Sbjct: 307 --------RIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGC 358
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P+ Y L L ++ K E + +++
Sbjct: 359 LPNARTYGYL---LKSTKKPEEVPGILERME 386
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 75/207 (36%), Gaps = 5/207 (2%)
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
E G P +N ++ + F E + + MS N T+ L++ + K
Sbjct: 148 ESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLVNERTFGVLLNRYAAAHKTE 207
Query: 390 DA-LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A +++F + I ++ L C G A + CK Y +
Sbjct: 208 EAAVKIFYKRKGAWI----RSMNVILNGWCVLGSLREAKRFWNDIITSKCKPDKFTYGIF 263
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L+ GK + L+ M E G D I +I LC ++ A+ V+ E +
Sbjct: 264 INSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNERDC 323
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLF 535
P Y+ L L + E Y L
Sbjct: 324 QPDVATYNSLIKHLCKIQRFEKVYELL 350
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 186/423 (43%), Gaps = 18/423 (4%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
V+G V R N A+ L+ I+ + ++ S+N+++K F + +
Sbjct: 112 VIGVFV-RMNRPDVAISLYRKMEIRR--IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE----------SLNVVL 240
K G PD+ T + ++ ++ +A+ + G + + G FD + N ++
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLI 228
Query: 241 WCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS 299
LC V A++L N M GK L +V+TY +++G K+G +L ++
Sbjct: 229 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 288
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
PD + +S +I+ L + G DA +F M EKG P+ YN +I + S G + + +
Sbjct: 289 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 348
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ M P++ T+ LIS +K K+ +A ++ +EML R I P T T S + C
Sbjct: 349 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 408
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
+ A M+ + + + ++ + + L E+ G ++
Sbjct: 409 HNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 464
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y +I G C + L A + +E + G CP + + L + KLE A LF I+
Sbjct: 465 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 524
Query: 540 IAR 542
+++
Sbjct: 525 MSK 527
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 166/379 (43%), Gaps = 5/379 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y IV + + N+LS M + + PD+ S ++D + G A +
Sbjct: 255 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 314
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ + G+ + + N ++ C A L M + ++ +V+T+N +IS K
Sbjct: 315 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 374
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ E E++ E++ PD++T++ +I G + R DDA +FD M PD +
Sbjct: 375 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTF 430
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I Y DE M+ + +S N TY LI G + + A ++F+EM+
Sbjct: 431 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 490
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ P T T L C A+ +++ + L AY +++ + K
Sbjct: 491 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 550
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
DL+ + G D + Y +I+G C + +A ++ + G P Y+ L
Sbjct: 551 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 610
Query: 521 KLLASNKLESAYNLFRKIK 539
L + +++ + L +++
Sbjct: 611 GCLKAGEIDKSIELISEMR 629
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 157/338 (46%), Gaps = 4/338 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+A +V +YN ++ + +L DM + +NPD+ T + ++ + ++ G++++A
Sbjct: 322 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 381
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
++ + + D + N +++ C+ A +F+ M +V+T+N +I +
Sbjct: 382 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP---DVVTFNTIIDVYC 438
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
+ +V E ++L+EI G ++ T++ LI G ++ A ++F M G PDT
Sbjct: 439 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 498
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
N ++ + +E ++ ++ + + + Y +I G+ K KV +A ++F +
Sbjct: 499 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 558
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
G+ P T + C A +++ K + G + + Y L+R G+
Sbjct: 559 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 618
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
++L EM+ +G+ D + ++A L G+L+ +
Sbjct: 619 DKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS 655
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 183/397 (46%), Gaps = 2/397 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA++ F I+ ++ D+ S++ ++ R + L M K G P + T
Sbjct: 90 EAVISLFRH-IEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGS 148
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
+++ F ++ +A+ ++ ++ G + + N ++ LC+ V A + N M K
Sbjct: 149 LVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMG 208
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+ +V+TYN +I+ G+ R+L +++ G PD +TFS +I+ G+ G++ +A
Sbjct: 209 IRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAK 268
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+ +D M ++ P+ YN++I+ G DE K M S PN TY L++G
Sbjct: 269 KQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGY 328
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
KS++V DA+++ M G+ T T + + C G +AA + + G +
Sbjct: 329 CKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDI 388
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
+ +LL L GK L ++Q+S Y +I G+C ++E+A +
Sbjct: 389 YTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCS 448
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
KG P + Y+ + L A+ L+RK+K
Sbjct: 449 LALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMK 485
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 86/167 (51%), Gaps = 1/167 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN +V + K D +L M+ +GV+ D T + + + +AGQ A ++L R+
Sbjct: 320 TYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARM 379
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHV-GAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQV 283
G+ D + N++L LC+ + A L + K + + ++TYNI+I G K +V
Sbjct: 380 VSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKV 439
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
+ + + +G SPD +T++ ++ GL R +A E++ MK+
Sbjct: 440 EDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKK 486
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 109/271 (40%), Gaps = 35/271 (12%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P + FS L+ + + + + I +F ++ G D +++ +I + +
Sbjct: 71 PSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSC 130
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
M EP++ T+ L++G ++ +A+ + ++++ G P+ + ++ LC
Sbjct: 131 LGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 190
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL--SG----------------------- 454
A+ + K+G + + Y L+ RL SG
Sbjct: 191 NRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVIT 250
Query: 455 -------FGKCGMLLDL---WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
FGK G LL+ + EM + + Y +I GLC G L+ A V+ +
Sbjct: 251 FSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMV 310
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
KGF P+ + Y+ L N S +++ A +
Sbjct: 311 SKGFFPNAVTYNTLVNGYCKSKRVDDAMKIL 341
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/191 (18%), Positives = 87/191 (45%), Gaps = 8/191 (4%)
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
D RL SGL S K DAL +F +M + +PS + L + A + +++
Sbjct: 40 DYRERLRSGL-HSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRH 98
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+G L ++ L+ + + L +M + G+ + ++ G C++ +
Sbjct: 99 IEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNR 158
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK-------IARQND 545
++ A+ ++++ + G+ P+ ++Y+ + + L + ++++A ++ ++ + N
Sbjct: 159 IQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNS 218
Query: 546 YARRLWRSKGW 556
RL+ S W
Sbjct: 219 LITRLFHSGKW 229
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 75/175 (42%)
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
F++ + + M+ P++ ++RL+ + K +K + +F + GI + ++
Sbjct: 54 FNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFST 113
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
++ C A+ K K+G + S+ + L+ + + L ++ G
Sbjct: 114 LIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLG 173
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
Y + IY +I LC Q++ A+ V+ + G P + Y+ L +L S K
Sbjct: 174 YEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGK 228
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 186/431 (43%), Gaps = 37/431 (8%)
Query: 145 AMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIV 204
A+V + P + + ++++++ A + F ++L ++ K G D+ L+ +
Sbjct: 87 AVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTL 146
Query: 205 MDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KV 263
M G+V +A+ +L D G +FD ++ LC+ A +F MK +V
Sbjct: 147 MKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRV 206
Query: 264 LFNVMTYNIVISGWSKLGQV--------------VEME---------------------R 288
N++ YN VI G K G V +E++ +
Sbjct: 207 YPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVK 266
Query: 289 VLKEIVAEG-FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
+L E+V G PD TF+ LI+GL + GR+ +A V M ++G PD +YNA+++ Y
Sbjct: 267 LLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGY 326
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
G E + + M PN+ +Y LI+G K R V +A+ + EM ++ +VP T
Sbjct: 327 CLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDT 386
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T L+ L G + + R G L Y +LL K L L+
Sbjct: 387 VTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQH 446
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
+ E G + Y ++ GLC G+L+ A + + KG P+ Y+ + + L
Sbjct: 447 IIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGF 506
Query: 528 LESAYNLFRKI 538
L+ A L K+
Sbjct: 507 LDEAEALLYKM 517
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 158/338 (46%), Gaps = 2/338 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M K V P+L + V+D + G V +A + + + G++ D S N ++ C
Sbjct: 201 MKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGR 260
Query: 249 VGAASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
AA L + M +GKV +V T+NI+I G KLG+V E V+ ++ G+ PD ++++
Sbjct: 261 FQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYN 320
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
L+ G +G + +A +VFD M E+ P+ +Y +I+ Y V DE M M +
Sbjct: 321 ALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNK 380
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
N P+ TY L+ GL KS + ++ E M G T L+ + A
Sbjct: 381 NLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKA 440
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ +++ ++G ++ Y +LL L G+ +++ + G + Y +I G
Sbjct: 441 LALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHG 500
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
LC G L+ A ++ + + + P+ + + + +L
Sbjct: 501 LCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAILV 538
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 131/290 (45%), Gaps = 37/290 (12%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A V + + V DV ++N+++ L + NV++ M K G PD+ + +
Sbjct: 262 QAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNA 321
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
+M+ + +G VG A +F+ M +
Sbjct: 322 LMNGYCLSGS-----------------------------------VGEAKQVFDKMVERT 346
Query: 264 -LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
L NV++Y +I+G+ K+ V E +L E+ + PD++T++ L++GL ++GR
Sbjct: 347 ALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEW 406
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
++ + M+ G D YN ++ +Y FD+ + ++ + PN+ TY L+ GL
Sbjct: 407 DLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGL 466
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG-PPHAAMMMYK 431
KS ++ A E+F+ + +G P+ T + LC G A ++YK
Sbjct: 467 CKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYK 516
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 142/345 (41%), Gaps = 38/345 (11%)
Query: 237 NVVLWCLCQRLHVGAASSLFNSMKGKVLF--NVMTYNIVISGWSKLGQ------------ 282
N +L L + A SL+ ++ K +++T++I+I+ +++LGQ
Sbjct: 73 NKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNIL 132
Query: 283 -----------------------VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
V+E +L E V GF D + + +I GL + G+
Sbjct: 133 KMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTR 192
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
DAI++F MK+ P+ YN VI G DE M E ++ +Y +I
Sbjct: 193 DAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMI 252
Query: 380 SGLLKSRKVADALEVFEEMLDRG-IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
G + A+++ +EM+ RG + P T ++ LC G A + K G
Sbjct: 253 HGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGW 312
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
K + +Y L+ G G ++ +M E + Y +I G C + ++ A++
Sbjct: 313 KPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMV 372
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
++ E K P + Y+ L + L S + ++L ++ + Q
Sbjct: 373 LLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQ 417
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 88/172 (51%), Gaps = 7/172 (4%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR--RKFFDFMCNVLSDMAKEGVNPDLETL 201
EAMVL + + N+ D +YN ++ L + R +++ +++ M G DL T
Sbjct: 369 EAMVLL--TEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEW--DLVEAMRASGQPADLITY 424
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
++++D + + + KA+ + + + G+ + + N++L LC+ + A +F +
Sbjct: 425 NVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSA 484
Query: 262 K-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
K N+ TYNI+I G K G + E E +L ++V + P+ +TF ++ +
Sbjct: 485 KGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAI 536
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/202 (17%), Positives = 87/202 (43%), Gaps = 1/202 (0%)
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSY-NCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
+N ++S I + ++ + Y + S +P++ T++ LI+ + ++ A + +
Sbjct: 72 FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
L G +T+ ++ LC G A+ + + G + Y ++ L GK
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+ ++ +M++ + +Y VI GLC G ++ A + E + G Y+ +
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251
Query: 519 SNKLLASNKLESAYNLFRKIKI 540
+ + + ++A L ++ +
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVV 273
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 177/418 (42%), Gaps = 39/418 (9%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
VA DVK N +++ L +D +C V +M + G+ P + T + ++DSF++ G+ K
Sbjct: 1080 VAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVA 1139
Query: 219 QMLGRLEDFG---LKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--------------- 260
+L +E G L D + NVV+ L ++ + A+ L M+
Sbjct: 1140 MLLKEMETRGSGCLPNDV-TYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTYNPLIT 1198
Query: 261 --------------------GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
++ V+TYN +I G + G V + E+ A G P
Sbjct: 1199 GLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLP 1258
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
D +T++ L+ G +AG + +A+ +F ++ G P YN +I Y +GD +E
Sbjct: 1259 DVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILK 1318
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
+ M C PN+ TYT L+ G L R +A A E F+EML +G+ P + +
Sbjct: 1319 EEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELIL 1378
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
G A + + G Y +L+ L G +L +M +G D Y
Sbjct: 1379 GDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITY 1438
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+I C G L A + + G PS + ++ + + L SAY FRK+
Sbjct: 1439 TCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKM 1496
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 165/366 (45%), Gaps = 1/366 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+++ + V +YN ++ L + + ++M G+ PD+ T + +++ + +AG
Sbjct: 1216 MENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGN 1275
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
+ +A+ + G L GL + N+++ C+ + A L M + L NV TY I
Sbjct: 1276 LKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTI 1335
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
++ G + + E++++G PD ++ I G I A E+ + + +G
Sbjct: 1336 LMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEG 1395
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
DT YN +I G+ + + M S +P+ TYT LI + + +A
Sbjct: 1396 ISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREAR 1455
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
++F M+ G++PS T T + C G ++A ++K + G + + Y +L+ L
Sbjct: 1456 KIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 1515
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G+ + +HEM E G ++ Y +I G C +G E+A+ E + G P
Sbjct: 1516 CRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDY 1575
Query: 513 LVYSKL 518
L + L
Sbjct: 1576 LTHKAL 1581
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 145/320 (45%), Gaps = 10/320 (3%)
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
GNL EA++LF + ++ +A V +YN+++ R + + +M ++G P++
Sbjct: 1274 GNLK-EALLLFGD--LRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNV 1330
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
T +I+M + + A + + GL+ D + N + C L +G + F
Sbjct: 1331 CTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRI---CAELILGDIARAFEL 1387
Query: 259 ----MKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
M + + +TYNI+I G K G + + + + ++V+ G PD +T++ LI
Sbjct: 1388 REVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCE 1447
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G + +A ++F+ M G P + +I Y G+ +++ M EPN T
Sbjct: 1448 RGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEIT 1507
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y LI L + + A F EML+RG+V + T T ++ C G AM Y +
Sbjct: 1508 YNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMH 1567
Query: 435 KVGCKLSLTAYKLLLRRLSG 454
+ G +K LL+ G
Sbjct: 1568 QNGIHPDYLTHKALLKGFDG 1587
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 118/289 (40%), Gaps = 42/289 (14%)
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
+E+ + G +PD + ++ L A R DD V + M E G P YN ++ +++
Sbjct: 1071 AFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFL 1130
Query: 349 SVGDFDECMKYYKGMSSY--NCEPNMDTYTRLISGLLKSRKVADALEVFE---------- 396
G D+ K M + C PN TY +I+GL + + +A E+ E
Sbjct: 1131 KEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASS 1190
Query: 397 ------------------------EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
EM + GI+P+ T + + L G AA + + +
Sbjct: 1191 FTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAE 1250
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCN 489
R +G + Y L L+G+ K G L L L+ +++ +G Y +I G C
Sbjct: 1251 MRAMGLLPDVITYNSL---LNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCR 1307
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+G LE A ++ EE +G P+ Y+ L L L A F ++
Sbjct: 1308 LGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEM 1356
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 85/222 (38%), Gaps = 3/222 (1%)
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+ F M G PD N V+ +D+ ++ M EP++ TY L+
Sbjct: 1069 LSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDS 1128
Query: 382 LLKSRKVADALEVFEEMLDR--GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
LK + + +EM R G +P+ T + L G A + + R + K
Sbjct: 1129 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR-LSKK 1187
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
S Y L+ L G + DL EM+ G Y +I GL G +E A +
Sbjct: 1188 ASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 1247
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
E G P + Y+ L N + L+ A LF ++ A
Sbjct: 1248 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRA 1289
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 174/385 (45%), Gaps = 1/385 (0%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
W +V +++ N+++ L ++ FD M V DM G +P++ T ++D R
Sbjct: 147 WVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQ 206
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTY 270
G KA ++ + + + +++ LC + A S+F +M+ +L N+ TY
Sbjct: 207 GDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTY 266
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
N ++ G+ K+ V + + +E++ +G P+ +TF LI+GL + + A + M
Sbjct: 267 NTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS 326
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
G P+ YN +I Y G+ E + + + + P++ TY+ LI GL ++ +
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEE 386
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A + +EM +G +P+ T + ++ C G A+ + + + G + ++ + L+
Sbjct: 387 ADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID 446
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
GK + L+ EM G D Y +I G G + A + +E G P
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506
Query: 511 SRLVYSKLSNKLLASNKLESAYNLF 535
+ S L + L ++ A LF
Sbjct: 507 NVFTLSCLIDGLCKDGRISDAIKLF 531
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 166/358 (46%), Gaps = 6/358 (1%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
NVLS + P++ +++ +F G V +A+ + +++ ++ N+VL L
Sbjct: 114 NVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKMDVLPA---MQACNMVLDGL 168
Query: 244 CQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
++ ++ M + NV+TY +I G + G ++ R+ E++ + P
Sbjct: 169 VKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTV 228
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+ ++ LI GL RI +A +F TM+ G P+ YN ++ Y + + ++ Y+
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQE 288
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M PN+ T+ LI GL K+ ++ A + +M G+VP+ ++ C G
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A+ ++ + K + Y +L++ L G + L EM++ G+ + Y
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+I G C G +E A+ V + KG P+ + +S L + + K+E+A L+ ++ I
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI 466
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 142/283 (50%), Gaps = 17/283 (6%)
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
GNLS EA+ L + I+ + DV +Y++++K L + +L +M K+G P+
Sbjct: 347 GNLS-EALSL--HSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
T + ++D + + G + KAI++ ++ + G++ + + + ++ C+ + AA L+
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463
Query: 259 MKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
M K +L +V+ Y +I G K G E R+ KE+ G P+ T S LI+GL + GR
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGR 523
Query: 318 IDDAIEVF------DTMKEKG-------CGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
I DAI++F DT K C P+ Y A+I + G + K++ M
Sbjct: 524 ISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMR 583
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
P++ T +I G ++ + D + + ++L GI+P++
Sbjct: 584 CSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNS 626
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 141/343 (41%), Gaps = 53/343 (15%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV ++ +++ L + L DMA GV P++ + ++D + +AG + +
Sbjct: 296 PNVV----TFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSE 351
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVIS 275
A+ + +E + D + ++++ LC + A L MK K L N +TYN +I
Sbjct: 352 ALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLID 411
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G+ K G + + V ++ +G P+ +TFS LI+G +AG+++ A+ ++ M KG P
Sbjct: 412 GYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLP 471
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYN---------------------------- 367
D AY A+I + G+ E + +K M
Sbjct: 472 DVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
Query: 368 --------------------CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
C PN YT LI GL ++ A + F +M G+ P
Sbjct: 532 LAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDV 591
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
T ++ MM+ K+G + + Y++L +
Sbjct: 592 FTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAK 634
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 123/306 (40%), Gaps = 40/306 (13%)
Query: 64 QISSHNSFPNVYKES-RSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWN 122
+I H P+V+ S + +D D LL E + +G + +I+
Sbjct: 358 EIEKHEILPDVFTYSILIKGLCGVDRMEEADG-LLQEMKKKGFLPNAVTYNTLIDGYCKE 416
Query: 123 VNVDLSLDVVGKVVNRG---NL------------SGE---AMVLFFNWAIKHPNVAKDVK 164
N++ +++V ++ +G N+ +G+ AM L+ IK + DV
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK--GLLPDVV 474
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y ++ + + +M + G++P++ TLS ++D + G++ AI++ L
Sbjct: 475 AYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF--L 532
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVG---------------AASSLFNSMKGKVLF-NVM 268
G N + LC HV AS F+ M+ L +V
Sbjct: 533 AKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVF 592
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
T ++I G + + ++ + +I+ G P+S + L +G +G + A+ + +
Sbjct: 593 TCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDL 652
Query: 329 KEKGCG 334
G G
Sbjct: 653 SGIGIG 658
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 173/385 (44%), Gaps = 1/385 (0%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
W +V +++ N+++ L ++ FD M V DM G +P++ T ++D R
Sbjct: 147 WVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQ 206
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTY 270
G KA ++ + + + +++ LC + A S+F +M+ +L N+ TY
Sbjct: 207 GDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTY 266
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
N ++ G+ K+ V + + E++ +G P+ +TF LI+GL + + A + M
Sbjct: 267 NTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS 326
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
G P+ YN +I Y G+ E + + + + P++ TY+ LI GL ++ +
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEE 386
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A + +EM +G +P+ T + ++ C G A+ + + + G + ++ + L+
Sbjct: 387 ADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID 446
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
GK + L+ EM G D Y +I G G + A + +E G P
Sbjct: 447 GYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHP 506
Query: 511 SRLVYSKLSNKLLASNKLESAYNLF 535
+ S L + L ++ A LF
Sbjct: 507 NVFTLSCLIDGLCKDGRISDAIKLF 531
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 165/358 (46%), Gaps = 6/358 (1%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
NVLS + P++ +++ +F G V +A+ + +++ ++ N+VL L
Sbjct: 114 NVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKMDVLPA---MQACNMVLDGL 168
Query: 244 CQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
++ ++ M + NV+TY +I G + G ++ R+ E++ + P
Sbjct: 169 VKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTV 228
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+ ++ LI GL RI +A +F TM+ G P+ YN ++ Y + + ++ Y
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXE 288
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M PN+ T+ LI GL K+ ++ A + +M G+VP+ ++ C G
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A+ ++ + K + Y +L++ L G + L EM++ G+ + Y
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+I G C G +E A+ V + KG P+ + +S L + + K+E+A L+ ++ I
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI 466
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 142/283 (50%), Gaps = 17/283 (6%)
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
GNLS EA+ L + I+ + DV +Y++++K L + +L +M K+G P+
Sbjct: 347 GNLS-EALSL--HSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
T + ++D + + G + KAI++ ++ + G++ + + + ++ C+ + AA L+
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463
Query: 259 MKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
M K +L +V+ Y +I G K G E R+ KE+ G P+ T S LI+GL + GR
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGR 523
Query: 318 IDDAIEVF------DTMKEKG-------CGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
I DAI++F DT K C P+ Y A+I + G + K++ M
Sbjct: 524 ISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMR 583
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
P++ T +I G ++ + D + + ++L GI+P++
Sbjct: 584 CSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNS 626
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 141/343 (41%), Gaps = 53/343 (15%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV ++ +++ L + L DMA GV P++ + ++D + +AG + +
Sbjct: 296 PNVV----TFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSE 351
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVIS 275
A+ + +E + D + ++++ LC + A L MK K L N +TYN +I
Sbjct: 352 ALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLID 411
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G+ K G + + V ++ +G P+ +TFS LI+G +AG+++ A+ ++ M KG P
Sbjct: 412 GYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLP 471
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYN---------------------------- 367
D AY A+I + G+ E + +K M
Sbjct: 472 DVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
Query: 368 --------------------CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
C PN YT LI GL ++ A + F +M G+ P
Sbjct: 532 LAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDV 591
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
T ++ MM+ K+G + + Y++L +
Sbjct: 592 FTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAK 634
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/284 (17%), Positives = 115/284 (40%), Gaps = 29/284 (10%)
Query: 106 FLQKLKGKGVIEDAL-WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVK 164
LQ++K KG + +A+ +N +D GN+ V + + ++
Sbjct: 390 LLQEMKKKGFLPNAVTYNTLID-------GYCKEGNMEKAIEVC---SQMTEKGIEPNII 439
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+++ ++ + + + ++M +G+ PD+ + ++D + G +A ++ +
Sbjct: 440 TFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM 499
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--------------NVMTY 270
++ GL + +L+ ++ LC+ + A LF + G N + Y
Sbjct: 500 QEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMY 559
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
+I G G++ + + ++ G PD T +I+G RA + D + + + +
Sbjct: 560 TALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILK 619
Query: 331 KGCGPDTNAYNAVISNYISVGDFDE----CMKYYKGMSSYNCEP 370
G P+++ Y + Y G C + + + N EP
Sbjct: 620 MGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEP 663
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 178/382 (46%), Gaps = 4/382 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +V ++N+++ L + L M G+ P + T + ++ F G++ A
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR 280
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
++ ++ G + D ++ N +L +C G AS + MK L + ++YNI+I G
Sbjct: 281 LIISEMKSKGFQPDMQTYNPILSWMCNE---GRASEVLREMKEIGLVPDSVSYNILIRGC 337
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
S G + E+V +G P T++ LI GL +I+ A + ++EKG D+
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I+ Y GD + + M + +P TYT LI L + K +A E+FE+
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
++ +G+ P + + ++ C+ G A + K+ + Y L+R L G GK
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+L EM+ G D Y +I+G G ++A +V +E L GF P+ L Y+
Sbjct: 518 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNA 577
Query: 518 LSNKLLASNKLESAYNLFRKIK 539
L L + + E A L R++K
Sbjct: 578 LLKGLSKNQEGELAEELLREMK 599
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 159/360 (44%), Gaps = 19/360 (5%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCN------VLSDMAK 191
RG + G +++ +K D+++YN I+ +MCN VL +M +
Sbjct: 273 RGRIEGARLII---SEMKSKGFQPDMQTYNPIL---------SWMCNEGRASEVLREMKE 320
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
G+ PD + +I++ G + A + G+ + N ++ L + A
Sbjct: 321 IGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEA 380
Query: 252 ASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A L ++ K ++ + +TYNI+I+G+ + G + + E++ +G P T++ LI
Sbjct: 381 AEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIY 440
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
L R + +A E+F+ + KG PD N ++ + ++G+ D K M + P
Sbjct: 441 VLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINP 500
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
+ TY L+ GL K +A E+ EM RGI P + + + G A M+
Sbjct: 501 DDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVR 560
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
+ +G +L Y LL+ LS + + +L EM+ G + + VI + N+
Sbjct: 561 DEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 156/353 (44%), Gaps = 9/353 (2%)
Query: 198 LETLS-IVMDSFIRAG----QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
LET S I+ D +R V +AI+ +++ G E+ N +L L + + A
Sbjct: 150 LETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENA 209
Query: 253 SSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
+ M + ++ NV T+NI+I+ K G++ + + L + G P +T++ L++G
Sbjct: 210 WVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQG 269
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
GRI+ A + MK KG PD YN ++S + G E ++ M P+
Sbjct: 270 FSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPD 326
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+Y LI G + + A +EM+ +G+VP+ T + + L AA ++ +
Sbjct: 327 SVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIR 386
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ R+ G L Y +L+ G L EM G Y +I LC
Sbjct: 387 EIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKN 446
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
+ A + E+ + KG P ++ + L + A ++ A++L +++ + N
Sbjct: 447 KTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSIN 499
>gi|224107981|ref|XP_002314676.1| predicted protein [Populus trichocarpa]
gi|222863716|gb|EEF00847.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/472 (24%), Positives = 203/472 (43%), Gaps = 12/472 (2%)
Query: 63 FQISSH---NSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQK--LKGKGVIE 117
F I SH + +PN+ S K I S + E + G L+K L V+E
Sbjct: 73 FVIPSHANCDKYPNI------ESHKNIASLSLLSEASDSDAHKVGEILKKHYLSEDAVVE 126
Query: 118 DALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRK 177
AL + + D+V +++ R + + F WA + YN ++ LG+ +
Sbjct: 127 -ALNESGISATHDLVSQLLKRFSNQWLIALGVFIWAKNQTGYVHKPEIYNSMIDILGKSR 185
Query: 178 FFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLN 237
F M +++ +M+ L T+ VM +R G+ +AI LE FGL E++N
Sbjct: 186 KFSLMWDLVQEMSGLNGYVSLVTMGKVMKRLVRDGKYNEAIDAFRGLEKFGLSKSTEAMN 245
Query: 238 VVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
V++ L + V A ++ +G + + +YNI+ SG+ K + + ++E+ G
Sbjct: 246 VLMDILARNGRVEDARAVALEFEGCLTLDYRSYNILSSGYCKARMFGDARKTMEEMEERG 305
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
F P+ ++++ IE G + + + M+EKGC PD Y I ++ +
Sbjct: 306 FHPNVVSYTAFIEAYGEQKDFRNVEIILNEMQEKGCPPDLITYTVYIRALGKARQINKAL 365
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+ + + Y LI L S ++ DA +FE++ +G+ G + +
Sbjct: 366 EICEEIKRNGFVLGTQFYCSLIHSLCLSGRLKDAWNIFEDVEKQGVGRDLGMYKAMISAA 425
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
C+ +A+ + K + CK + Y LL+ ML L + M E+ D
Sbjct: 426 CALSQDESALKLLHKMEEDSCKPDVQTYAPLLKMCCRKKSMKMLKFLLNHMFENDVSIDI 485
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
Y+ ++ GL G+L+ A +E++ KG P Y L +L N E
Sbjct: 486 VTYDLLVHGLRKQGKLKYACFFFQEAVLKGMVPCDKTYKILLEELERKNMAE 537
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 111/247 (44%), Gaps = 21/247 (8%)
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG----------D 352
+T +++ L R G+ ++AI+ F +++ G T A N ++ G +
Sbjct: 207 VTMGKVMKRLVRDGKYNEAIDAFRGLEKFGLSKSTEAMNVLMDILARNGRVEDARAVALE 266
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
F+ C+ + +Y L SG K+R DA + EEM +RG P+ + T+
Sbjct: 267 FEGCLTL-----------DYRSYNILSSGYCKARMFGDARKTMEEMEERGFHPNVVSYTA 315
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
F+E ++ + ++ GC L Y + +R L + L++ E++ +G
Sbjct: 316 FIEAYGEQKDFRNVEIILNEMQEKGCPPDLITYTVYIRALGKARQINKALEICEEIKRNG 375
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
+ + Y +I LC G+L++A + E+ ++G +Y + + A ++ ESA
Sbjct: 376 FVLGTQFYCSLIHSLCLSGRLKDAWNIFEDVEKQGVGRDLGMYKAMISAACALSQDESAL 435
Query: 533 NLFRKIK 539
L K++
Sbjct: 436 KLLHKME 442
>gi|242086476|ref|XP_002443663.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
gi|241944356|gb|EES17501.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
Length = 853
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 132/253 (52%), Gaps = 2/253 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +YN I+ A GR + V +M + G PD T ++D +AG + A+ + G
Sbjct: 395 VVTYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYG 454
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLG 281
R+++ GL D + + ++ CL + + AA LF M + N++TYNI+I+ +K
Sbjct: 455 RMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKAR 514
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ ++ K++ GF PD +T+S ++E LG G +D+A VF M+ + PD Y
Sbjct: 515 NYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR-RDWAPDEPVYG 573
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++ + G+ D+ + +Y+ M +PN+ T L+S LK + DA V + ML +
Sbjct: 574 LLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNMLAQ 633
Query: 402 GIVPSTGTITSFL 414
G+VPS T T L
Sbjct: 634 GLVPSVQTYTLLL 646
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 147/330 (44%), Gaps = 11/330 (3%)
Query: 198 LETLSIVMDSFIRAGQVYKAIQ----MLGRLE----DFGLKFDAESLNVVLWCLCQRLHV 249
L+ L +D+F +A QV K + LG + G K D + ++ L Q
Sbjct: 318 LDNLHCKIDAF-QANQVLKLLHDHTVALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQF 376
Query: 250 GAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
G L + M + V+TYN +I + + + E +V +E+ G+ PD +T+ L
Sbjct: 377 GVLKKLLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTL 436
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I+ +AG +D A++++ M+E G PDT Y+A+++ G K + M C
Sbjct: 437 IDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGC 496
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
PN+ TY +I+ K+R + ++++++M G P T + +E L G A
Sbjct: 497 TPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEA 556
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++ + R+ Y LL+ G L + M + G + +++
Sbjct: 557 VFIEMRRDWAP-DEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFL 615
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+ + ++A +V++ L +G PS Y+ L
Sbjct: 616 KMNRFQDAYIVLQNMLAQGLVPSVQTYTLL 645
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%)
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
++ G D + Y +I F K MS +C+P + TY R+I ++ +
Sbjct: 352 RQPGFKHDGHTYTTMIGILGQARQFGVLKKLLDEMSRAHCKPTVVTYNRIIHAYGRANYL 411
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A++VFEEM + G P T + ++ G AM +Y + ++VG Y +
Sbjct: 412 KEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSAM 471
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L G+ L+ EM E+G + Y +IA EN V + ++ GF
Sbjct: 472 VNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGF 531
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P ++ YS + L L+ A +F +++
Sbjct: 532 RPDKITYSIVMEVLGHCGHLDEAEAVFIEMR 562
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 94/222 (42%), Gaps = 35/222 (15%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D +Y+ +V LG+ + +M + G P+L T +I++ +A +
Sbjct: 461 LSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVV 520
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
++ ++ G + D + ++V+ L H+ A ++F
Sbjct: 521 KLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVF---------------------- 558
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
+EM R ++PD + L++ G+AG +D A+ + M + G P+
Sbjct: 559 -----IEMRR--------DWAPDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVP 605
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
N+++S ++ + F + + M + P++ TYT L+S
Sbjct: 606 TCNSLLSAFLKMNRFQDAYIVLQNMLAQGLVPSVQTYTLLLS 647
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 191/466 (40%), Gaps = 40/466 (8%)
Query: 109 KLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGE--AMVLFFNWAIKHPNVAKDVKSY 166
+L G + D + + LS+ ++NR +G+ A V F ++ D +
Sbjct: 188 QLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFE-QMQRAGALPDKFTV 246
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
++ KA + K + +M K GV +L VM+ + GQ A +ML L
Sbjct: 247 AIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPG 306
Query: 227 FG------------------------------------LKFDAESLNVVLWCLCQRLHVG 250
G L D V+ CQ +
Sbjct: 307 RGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRME 366
Query: 251 AASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A+ L N M ++ N+ YNI+I+G+ KLG++VE +L E+ G PD+ +++ L+
Sbjct: 367 DAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLV 426
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
+G + G ++ A E ++TM G T YNA++ + S+G D+ ++ + M
Sbjct: 427 DGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIA 486
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
PN + + L+ G KS K AL +++E L RG+ +T T + + LC A +
Sbjct: 487 PNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEEL 546
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
K ++ C + Y+ L G + +E++ G+ E + +I G
Sbjct: 547 VDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFI 606
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
Q ++ E +G P+ + Y L L +AYNL+
Sbjct: 607 AKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLY 652
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 172/407 (42%), Gaps = 29/407 (7%)
Query: 160 AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ 219
A +YN ++K D + M K+G+ P+ + S ++D F ++G+ KA+
Sbjct: 451 AATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALN 510
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWS 278
+ GL + + N V+ LC+ + A L + MK + +++TY + SG+
Sbjct: 511 LWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYC 570
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K+G + R+L E+ GF+P F+ LI G A + ++ M +G P+T
Sbjct: 571 KIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTV 630
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
AY A+I+ + GD Y M PN+ + L+S + K +A V + +
Sbjct: 631 AYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNL 690
Query: 399 LDRGIVPST-------GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT-------- 443
+ ++P G + +F++ + G H+A +M+ CKL
Sbjct: 691 VGTDMIPDISAPRLEIGKVANFIDTVAG-GNHHSAKIMWNIVIFGLCKLGRIEDAKNLLA 749
Query: 444 ------------AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
Y L+ S G + DL M G + Y +I GLC G
Sbjct: 750 DLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSG 809
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+L AV + ++ KG P+ + Y+ L +K + A+ L +++
Sbjct: 810 ELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRM 856
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 167/380 (43%), Gaps = 2/380 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S++++++AL D V +M G + + + +++ + G + + + ++
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ G D ++ ++ C+ V A M K V N++ Y+ V++G+ ++GQ
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM-KEKGCGPDTNAYNA 342
+ R+L + GFSP+ +T++ L++G +++A V + K K D + A
Sbjct: 295 NDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGA 354
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
VI+ Y +G ++ + M + N+ Y +I+G K ++ +A + EM G
Sbjct: 355 VINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVG 414
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
+ P T + S ++ C G + A Y + G + Y LL+ G L
Sbjct: 415 VRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDAL 474
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
LW M + G + ++ G G+ E A+ + +E+L +G + ++ + N L
Sbjct: 475 RLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGL 534
Query: 523 LASNKLESAYNLFRKIKIAR 542
++ A L K+K R
Sbjct: 535 CKIERMPEAEELVDKMKQWR 554
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 177/415 (42%), Gaps = 68/415 (16%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+L++M + +L +I+++ + + G++ +A +L + G++ D S N ++ C
Sbjct: 371 LLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYC 430
Query: 245 QRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMER--------------- 288
++ + A +N+M + +TYN ++ G+ LG + + R
Sbjct: 431 KKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEI 490
Query: 289 --------------------VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
+ KE +A G + ++ TF+ +I GL + R+ +A E+ D M
Sbjct: 491 SCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKM 550
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
K+ C PD Y + S Y +GD D + + + P ++ + LI+G +++
Sbjct: 551 KQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQH 610
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG-------CKLS 441
++ EM +RG+ P+T + + C G H A +Y + + G C
Sbjct: 611 GKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSL 670
Query: 442 LTAY---------KLLLRRLSG-------------FGKCGMLLDLWHEMQESGYPSDGEI 479
++ + L+L+ L G GK +D + + S +
Sbjct: 671 VSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFID---TVAGGNHHSAKIM 727
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
+ VI GLC +G++E+A ++ + KGF YS L + AS ++ A++L
Sbjct: 728 WNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDL 782
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 118/239 (49%), Gaps = 10/239 (4%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
N+ +M ++G+ P+L S ++ F R G+ +A +L L + D +
Sbjct: 650 NLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISA-------- 701
Query: 244 CQRLHVGAASSLFNSMKGKVLFNV-MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
RL +G ++ +++ G + + +NIVI G KLG++ + + +L ++ +GF D+
Sbjct: 702 -PRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADN 760
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
T+S LI G +G +D A ++ DTM G P+ YN++I G+ + +K
Sbjct: 761 FTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKK 820
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
+ + PN TY LI K + +A ++ + M++ GI P+ T + + LC+ G
Sbjct: 821 LWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQG 879
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 149/387 (38%), Gaps = 27/387 (6%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+AK+ ++N ++ L + + ++ M + PD+ T + + + G + +A
Sbjct: 520 LAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRAS 579
Query: 219 QMLGRLEDFGLKFDAESLN-VVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGW 277
++L LE+ G E N ++ + H LF + N + Y +I+GW
Sbjct: 580 RILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGW 639
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G + + E++ +G P+ S L+ R G+ D+A V + PD
Sbjct: 640 CKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDI 699
Query: 338 NA--------------------------YNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
+A +N VI +G ++ + +
Sbjct: 700 SAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVAD 759
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
TY+ LI G S V A ++ + ML G+ P+ T S + LC G A+ ++K
Sbjct: 760 NFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFK 819
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
K G + Y L+ + G L M E G Y +I GLC G
Sbjct: 820 KLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQG 879
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKL 518
+E A+ ++++ + P+ + Y L
Sbjct: 880 YMEEAIKLLDQMIENNVDPNYVTYWTL 906
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 158/377 (41%), Gaps = 27/377 (7%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K D+ +Y + + D +L+++ G P +E + ++ A Q
Sbjct: 550 MKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQ 609
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
K +L + + GL + + ++ C+ + A +L+ M K L N+ +
Sbjct: 610 HGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSS 669
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPD--------------------------SLTFS 306
++S + + G+ E VL+ +V PD + ++
Sbjct: 670 LVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWN 729
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
+I GL + GRI+DA + +K+KG D Y+++I + G D M S
Sbjct: 730 IVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSV 789
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
PN+ TY LI GL KS +++ A+ +F+++ +GI P+ T + ++ C G A
Sbjct: 790 GLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEA 849
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ ++ + G ++ Y +L+ L G + L +M E+ + Y +I G
Sbjct: 850 FKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQG 909
Query: 487 LCNIGQLENAVLVMEES 503
++ ++ +++S
Sbjct: 910 YVRCESVDVPIMPLDQS 926
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 18/258 (6%)
Query: 290 LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYIS 349
L E+ E FS + +F L+ L AG++D A++VFD M+ GC + N++++
Sbjct: 162 LVEVYKE-FSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQ 220
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
GD + ++ M P+ T + K + V ALE EEM G+ +
Sbjct: 221 TGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVA 280
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC---------GM 460
+ + C G + A M G ++ Y LL++ G C G+
Sbjct: 281 YHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVK-----GYCNEKNMEEAEGV 335
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ ++ Q D ++ VI G C +G++E+A ++ E + + VY+ + N
Sbjct: 336 VQEIRKNKQ---LVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMIN 392
Query: 521 KLLASNKLESAYNLFRKI 538
++ A+N+ ++
Sbjct: 393 GYCKLGRMVEAHNILHEM 410
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/307 (18%), Positives = 116/307 (37%), Gaps = 36/307 (11%)
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
F+ ++++++ + GQ+ +V E+ G + + ++ L + G + + V
Sbjct: 171 FSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAV 230
Query: 325 FDTMKEKGCGPDT-----------------------------------NAYNAVISNYIS 349
F+ M+ G PD AY+AV++ Y
Sbjct: 231 FEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCE 290
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML-DRGIVPSTG 408
VG ++ + + PN+ TYT L+ G + + +A V +E+ ++ +V
Sbjct: 291 VGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEA 350
Query: 409 TITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM 468
+ + C G A + + +++L Y +++ G+ ++ HEM
Sbjct: 351 VFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEM 410
Query: 469 QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
G D Y ++ G C G + A LR GF + L Y+ L + +
Sbjct: 411 TGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSI 470
Query: 529 ESAYNLF 535
+ A L+
Sbjct: 471 DDALRLW 477
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 74/170 (43%)
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
++ L+ L + ++ AL+VF+EM G S + S L L G A + ++++
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
++ G ++ + L+ EM + G + Y V+ G C +GQ
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
+A +++ +GF P+ + Y+ L +E A + ++I+ +Q
Sbjct: 295 NDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQ 344
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 197/420 (46%), Gaps = 5/420 (1%)
Query: 123 VNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFM 182
V + L V +++ + G+A+ +F+ IK ++YN ++ L ++ +
Sbjct: 156 VVTPMELSQVIRMLGNAKMIGKAITIFYQ--IKARKCQPTAQAYNSMIIMLIHEGQYEKV 213
Query: 183 CNVLSDMAKEG-VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLW 241
+ ++M+ EG +PD T S ++ +F + G+ AI++L +++ G++ A+ +++
Sbjct: 214 HELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIIS 273
Query: 242 CLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
+ +V A SLF M+ +V TY +I G K G++ E E+ E P
Sbjct: 274 LFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKP 333
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN-YISVGDFDECMKY 359
D++ + +I LG+AGR+DD +++F+ M C P+ YN +I + S E +
Sbjct: 334 DTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSW 393
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
++ M P+ TY+ LI G K+ ++ A+ + EEM ++G P S ++ L
Sbjct: 394 FERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGK 453
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
A ++++ ++ S Y ++++ L G+ ++L+ EM + G +
Sbjct: 454 AKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYA 513
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y +++GL L+ A+ M + G P Y+ + N L + A + +K
Sbjct: 514 YNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMK 573
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 153/336 (45%), Gaps = 8/336 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +Y +++ LG+ D + +M +E PD ++ +++ +AG++ +++
Sbjct: 299 DVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLF 358
Query: 222 GRLEDFGLKF---DAESLNVVLWCLCQ-RLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
E+ G+ + + N ++ L + + V S F MKG + + TY+I+I G
Sbjct: 359 ---EEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDG 415
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ K ++ + +L+E+ +GF P + LI+ LG+A R D A E+F +KE
Sbjct: 416 FCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSS 475
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y +I + G D+ + + MS C PN+ Y L+SGL ++ + +AL
Sbjct: 476 ARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMR 535
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+M + G +P + L L G PH AM M + K +Y +L LS G
Sbjct: 536 KMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAG 595
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+L EM G+ D Y ++ + + Q
Sbjct: 596 MFEEAAELMKEMNALGFEYDLITYSSILEAIGKVDQ 631
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 183/432 (42%), Gaps = 43/432 (9%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG---VNPDLETLSIVM 205
FF WA K N D +Y ++ L + + M ++ +M + V P LS V+
Sbjct: 109 FFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTP--MELSQVI 166
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKV 263
A + KAI + +++ + A++ N ++ L L+N M +G
Sbjct: 167 RMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHC 226
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+ +TY+ +IS + KLG+ R+L E+ G P + ++ +I + + A+
Sbjct: 227 HPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALS 286
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+F+ M+ C PD Y +I G DE +Y M +C+P+ +I+ L
Sbjct: 287 LFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLG 346
Query: 384 KSRKVADALEVFEEM--------------------------------LDR----GIVPST 407
K+ ++ D L++FEEM +R GI PS
Sbjct: 347 KAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSP 406
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHE 467
T + ++ C AMM+ ++ + G AY L+ L + + +L+ E
Sbjct: 407 FTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQE 466
Query: 468 MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
++E+ S +Y +I L G+L++A+ + +E + G P+ Y+ L + L +
Sbjct: 467 LKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACM 526
Query: 528 LESAYNLFRKIK 539
L+ A RK++
Sbjct: 527 LDEALTTMRKMQ 538
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 190/404 (47%), Gaps = 4/404 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG-VNPDLETLSIVMDSFIRAG 212
+K + DV ++N+++ + D V ++ K+ P L T +I+++++I G
Sbjct: 70 MKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEG 129
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYN 271
+ +A+++L + GL+ D + NV+ LC+ V A ++ + +V+TYN
Sbjct: 130 GIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYN 189
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
I++ G+ E E+ + EI + G P+ +T+S LI L R G+I++++ + MKEK
Sbjct: 190 ILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEK 249
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G PD Y+ +I+ + G D +++ M P++ Y +++ L K+ A
Sbjct: 250 GLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHA 309
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+E+F ++ + G P+ + + L L S G + A+ M + G + Y L+
Sbjct: 310 VEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISC 369
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L G + L +M + + Y+ V+ GLC ++++A+ V+ + G P+
Sbjct: 370 LCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPN 429
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKIKI--ARQNDYARRLWRS 553
Y+ L + S A L + I A D +RL ++
Sbjct: 430 ETTYTLLIEGIGFSGSRTQAMELANSLYIMNAISEDSFKRLNKT 473
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 175/405 (43%), Gaps = 68/405 (16%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN ++ + + VL M ++G +PD+ T +I++ +F G++
Sbjct: 43 DVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKI------- 95
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLG 281
D LK E L N+ K ++TY I+I + G
Sbjct: 96 ----DLALKVFEELLKD------------------NNCKP----TLITYTILIEAYILEG 129
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ E ++L E+++ G PD+ T++ + GL + G++D A E T+ +GC PD YN
Sbjct: 130 GIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYN 189
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD----------- 390
++ ++ G +DE K+ + S CEPN+ TY+ LIS L + K+ +
Sbjct: 190 ILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEK 249
Query: 391 ------------------------ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
A+E + M+ G +P + + LC G A
Sbjct: 250 GLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHA 309
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ ++ K +VGC ++++Y +L L G L + +M G D Y +I+
Sbjct: 310 VEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISC 369
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
LC G ++ A+ ++ + L F P+ + Y + L +++++ A
Sbjct: 370 LCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDA 414
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 133/296 (44%), Gaps = 8/296 (2%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V YN VISG+ K ++ + VL + +GFSPD +T + +I G+ID A++VF
Sbjct: 43 DVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVF 102
Query: 326 DT-MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
+ +K+ C P Y +I YI G DE +K M S EP+ TY + GL K
Sbjct: 103 EELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCK 162
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
KV A E + RG P T L L + G + GC+ ++
Sbjct: 163 EGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVT 222
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y +L+ L GK ++L M+E G D Y+ +IA C G+L+ A+ ++ +
Sbjct: 223 YSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMI 282
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI-------KIARQNDYARRLWRS 553
GF P + Y+ + L + + A +F K+ ++ N LW S
Sbjct: 283 CDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSS 338
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 119/267 (44%), Gaps = 2/267 (0%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V+ +I G+ + + RV+ + G PD ++ +I G +A RI+ A V
Sbjct: 9 DVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTVL 67
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG-MSSYNCEPNMDTYTRLISGLLK 384
D MK KG PD +N +I + G D +K ++ + NC+P + TYT LI +
Sbjct: 68 DRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYIL 127
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+ +AL++ +EML RG+ P T T LC G A + GCK +
Sbjct: 128 EGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVIT 187
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y +LLR L GK E+ G + Y +I+ LC G++E +V +++
Sbjct: 188 YNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMK 247
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESA 531
KG P Y L KL+ A
Sbjct: 248 EKGLTPDAYCYDPLIAAFCREGKLDMA 274
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 166/364 (45%), Gaps = 26/364 (7%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ +V +YN I+ AL + + D VL+ M K GV PD T + ++ F +GQ +AI
Sbjct: 112 ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAI 171
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
L ++ G++ D + N ++ LC+ A +F+SM + L ++ TY ++ G+
Sbjct: 172 VFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGY 231
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G +VEM +L +V G P+ FS L+ + ++++A+ VF M+++G P+
Sbjct: 232 ATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNA 291
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y VI G ++ M Y++ M P+ Y LI L K A E+F E
Sbjct: 292 VTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLE 351
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT-------------- 443
MLDRGI ST S ++ C G + ++ ++G K +
Sbjct: 352 MLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRNDEAKDLFVA 411
Query: 444 -----------AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
Y+L+ + G G L L+ M+++G D + +++ L G+
Sbjct: 412 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 471
Query: 493 LENA 496
+ A
Sbjct: 472 ITRA 475
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 164/352 (46%), Gaps = 10/352 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVN--PDLETLSIVMDSFIRAGQVYKAIQ 219
DV SYN+++ L +L MA +G + PD+ + S V++ F + G
Sbjct: 50 DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGD------ 103
Query: 220 MLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWS 278
L ++ D + + + N ++ LC+ V A + +M K V+ + MTYN ++ G+
Sbjct: 104 -LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 162
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
GQ E LK++ ++G PD +T++ L++ L + GR +A ++FD+M ++G PD
Sbjct: 163 SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDIT 222
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
Y ++ Y + G E M PN ++ L+ K KV +A+ VF +M
Sbjct: 223 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 282
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+G+ P+ T + ++ LC G AM+ +++ G + Y L+ L F K
Sbjct: 283 RQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKW 342
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
+L+ EM + G + +I C G++ + + + +R G P
Sbjct: 343 EKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKP 394
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 149/307 (48%), Gaps = 10/307 (3%)
Query: 232 DAESLNVVLWCLCQRLHVGAASSLFNSMK---GKVLFNVMTYNIVISGWSKLGQVVEMER 288
D S N++L LC A L + M G +V++Y+ VI+G+ K G
Sbjct: 50 DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGD------ 103
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
L +++ + SP+ +T++ +I L +A +D A+EV TM + G PD YN+++ +
Sbjct: 104 -LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 162
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTG 408
S G E + + K M S EP++ TY L+ L K+ + +A ++F+ M RG+ P
Sbjct: 163 SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDIT 222
Query: 409 TITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM 468
T + L+ + G + + G + + +L+ + K + ++ +M
Sbjct: 223 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 282
Query: 469 QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
++ G + Y VI LC G++E+A+L E+ + +G P +VY+ L + L +K
Sbjct: 283 RQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKW 342
Query: 529 ESAYNLF 535
E A LF
Sbjct: 343 EKAEELF 349
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 117/254 (46%), Gaps = 10/254 (3%)
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG--CGPDTNAYNAVIS 345
V E++ G PD +++ L+ GL R +A+E+ M + G C PD +Y+ VI+
Sbjct: 38 HVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVIN 96
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
+ GD D+ M PN+ TY +I+ L K++ V A+EV M+ G++P
Sbjct: 97 GFFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMP 149
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
T S + CS G P A++ KK R G + + Y L+ L G+C ++
Sbjct: 150 DCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIF 209
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
M + G D Y ++ G G L +++ +R G P+ V+S L
Sbjct: 210 DSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQ 269
Query: 526 NKLESAYNLFRKIK 539
K+E A +F K++
Sbjct: 270 EKVEEAMLVFSKMR 283
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 173/388 (44%), Gaps = 2/388 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKE-GVNPDLETLSIVMDSFIRAG 212
++ +A D +YN ++ L R C + M + G D + +I++ AG
Sbjct: 116 MREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAG 175
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYN 271
++ A ++ ++ + + V+L LC+ VG A +L M K V+ NV+TYN
Sbjct: 176 RIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYN 235
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I G + G+ ++ ++L+++ + SPD T++ ++ GL + G++ +V K
Sbjct: 236 ALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGK 295
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G + YNA+I+ Y GD + + M P + T+ +I G KV A
Sbjct: 296 GVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKA 355
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+ +M G+ P+T T S + CS G A+ + + G Y + +
Sbjct: 356 MAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDA 415
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L G+ L+ + G + IY ++ G C +G +++A +ME+ + P
Sbjct: 416 LCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPD 475
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y+ L + L +L+ A +L K+K
Sbjct: 476 VHTYNTLIDGLCKVKRLDRAIDLLDKMK 503
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 167/378 (44%), Gaps = 1/378 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D SY +++K L D C V + M++ P + T ++++D + +V +A +L
Sbjct: 160 DRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALL 219
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
G + + G+ + + N ++ LCQ + L M+ + + TY V+ G K
Sbjct: 220 GEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKH 279
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+V +VL E + +G + + LT++ LI G + G + A++V MK P +
Sbjct: 280 GKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTF 339
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N VI + G + M + M+ PN T+ LISG + AL + + M +
Sbjct: 340 NEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEE 399
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G++P T F++ LC G A ++ G K Y L+ G
Sbjct: 400 YGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDS 459
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L +M D Y +I GLC + +L+ A+ ++++ ++G P+ ++ L
Sbjct: 460 AFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIK 519
Query: 521 KLLASNKLESAYNLFRKI 538
++L K A ++ ++
Sbjct: 520 QMLWDKKHADAAKMYEQM 537
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 174/417 (41%), Gaps = 42/417 (10%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
GEA L K V +V +YN ++ L + FD + +L M + +PD T +
Sbjct: 213 GEAEALLGEMVNK--GVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYT 270
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-G 261
V+ + G+V ++L G+ + + N ++ C+ + AA + MK
Sbjct: 271 QVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRN 330
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
+V V T+N VI G+ G+V + L ++ G SP+++TF+ LI G G A
Sbjct: 331 RVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIA 390
Query: 322 IEVFDTMKEKGCGPDTNAY-----------------------------------NAVISN 346
+ + D M+E G PD Y +++
Sbjct: 391 LRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHG 450
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
Y VGD D + M+S NC P++ TY LI GL K +++ A+++ ++M +GI P+
Sbjct: 451 YCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPT 510
Query: 407 TGTITSFLEPLCSYGPPHA-AMMMYKKARKVGCKLSLTAYKLLLRR--LSGFGKCGMLLD 463
T T ++ + + HA A MY++ GCK Y L + G K +
Sbjct: 511 TCTFNILIKQM-LWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDM 569
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
EM E+G D E Y +I + G E A + L P YS L N
Sbjct: 570 AVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLN 626
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 122/280 (43%), Gaps = 36/280 (12%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N TYN +I+ KL + + L + G +PD+ T++ L+ GL RAG + A +F
Sbjct: 89 NRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLF 148
Query: 326 DTMKEK-GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
M + G D +Y +I + G D+ + + MS C P + TYT L+ GL K
Sbjct: 149 VQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCK 208
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
R+V +A + EM+++G+VP+ T + + LC G
Sbjct: 209 VRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEG----------------------- 245
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
R K L +M+ + D Y V+ GLC G++ + V+ E++
Sbjct: 246 ------RFDDVTK------LLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAI 293
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
KG L Y+ L N +++A ++ + +K R N
Sbjct: 294 GKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVN 333
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/390 (21%), Positives = 146/390 (37%), Gaps = 87/390 (22%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+L M + GV PD +T +I +D+ GQ+ +A + L G+K ++ C
Sbjct: 393 LLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYC 452
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
Q + +A L M + + +V TYN +I G K+ ++ +L ++ +G P +
Sbjct: 453 QVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTC 512
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD--------------------------- 336
TF+ LI+ + + DA ++++ M GC PD
Sbjct: 513 TFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVV 572
Query: 337 ----------TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS------ 380
YNA+I Y+ G ++ + M S +P+ TY+ L++
Sbjct: 573 EMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKD 632
Query: 381 --------GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
+ K V + E+FE+M + P T + L LC+ + K
Sbjct: 633 DSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLK 692
Query: 433 ARK-------------VGCKLSLTAYK----------------------LLLRRLSGFGK 457
+ +GC +L Y+ LLL L G
Sbjct: 693 MQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGD 752
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
GM + ++ +M GY D +++ +I L
Sbjct: 753 HGMAVSIFSDMLGLGYNYDEVVWKLLIDCL 782
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/328 (19%), Positives = 122/328 (37%), Gaps = 17/328 (5%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N DV +YN ++ L + K D ++L M K+G+ P T +I++ + + A
Sbjct: 471 NCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADA 530
Query: 218 IQMLGRLEDFGLKFDAESLNVVL---WCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVI 274
+M ++ G K D ++ + + W ++ + V +V TYN +I
Sbjct: 531 AKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAII 590
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI--------------EGLGRAGRIDD 320
+ G + ++++ PD T+S L+ E + + + +
Sbjct: 591 KAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRN 650
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
E+F+ M E P + Y A++ + +E M + + D L+
Sbjct: 651 LQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLG 710
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
+A E F M + P + L LC G A+ ++ +G
Sbjct: 711 CYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNY 770
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEM 468
+KLL+ L G G L++ M
Sbjct: 771 DEVVWKLLIDCLHEKGHAGACLEMLSVM 798
>gi|255661006|gb|ACU25672.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 376
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 173/351 (49%), Gaps = 8/351 (2%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQV---YKAIQMLGRLEDFGLKFDAESLNVVLW 241
V D+ + V+PD + +++ F RAG++ ++ +M+GR + S N+++
Sbjct: 12 VYKDIVESKVSPDAVVYNAMLNGFYRAGRMKDCFELWEMMGREGSRSV----ASFNIMMR 67
Query: 242 CLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
L V A S++ M K + + +TY I++ G+ K G + + +L+ +G
Sbjct: 68 GLFDNRKVEEAMSIWELMTKSGFVEDSVTYGILVHGFCKNGYINKSLHILEIAEQKGGVL 127
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
D+ +S +I L + +++ A+ V + M GC P+T+ YNA+I I D+ ++ +
Sbjct: 128 DAFAYSAMINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGASKRDDAVRIF 187
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
+ M + +C PN+ TY+ LI GL K + +A ++ +EML++G+ PS T + ++ LC
Sbjct: 188 REMGTTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLLMKGLCLG 247
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
A+ ++ + K G K + + +L+ L GK + L L+ +M +
Sbjct: 248 HKVEMALQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQ 307
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
++ G G + NA+++ L+ P + Y+ L + N++ A
Sbjct: 308 NTLMEGFYKDGNVRNALVIWARILKNELQPDIISYNITLKGLCSCNRISDA 358
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 149/363 (41%), Gaps = 34/363 (9%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
W + ++ V S+N++++ L + + ++ M K G D T I++ F +
Sbjct: 48 WEMMGREGSRSVASFNIMMRGLFDNRKVEEAMSIWELMTKSGFVEDSVTYGILVHGFCKN 107
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYN 271
G + K++ +L E G DA + + ++ LC+ + A S+ N M
Sbjct: 108 GYINKSLHILEIAEQKGGVLDAFAYSAMINALCKESKLEKAVSVLNGM------------ 155
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+ G P++ ++ LI+GL A + DDA+ +F M
Sbjct: 156 ----------------------IRSGCKPNTHVYNALIKGLIGASKRDDAVRIFREMGTT 193
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
C P+ Y+ +I F E K M P++ TY+ L+ GL KV A
Sbjct: 194 DCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLLMKGLCLGHKVEMA 253
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
L+++ ++ +G P + LCS G A+ +Y + C +L L+
Sbjct: 254 LQLWNQVTKKGFKPDVQMHNILIHGLCSVGKTQLALSLYLDMNRWNCAPNLVTQNTLMEG 313
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
G L +W + ++ D Y + GLC+ ++ +A+ + +++RK P+
Sbjct: 314 FYKDGNVRNALVIWARILKNELQPDIISYNITLKGLCSCNRISDAIWFLHDAVRKKIIPT 373
Query: 512 RLV 514
++
Sbjct: 374 KIT 376
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 119/258 (46%), Gaps = 1/258 (0%)
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + ERV K+IV SPD++ ++ ++ G RAGR+ D E+++ M +G ++
Sbjct: 4 GDIDGAERVYKDIVESKVSPDAVVYNAMLNGFYRAGRMKDCFELWEMMGREG-SRSVASF 62
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N ++ +E M ++ M+ + TY L+ G K+ + +L + E
Sbjct: 63 NIMMRGLFDNRKVEEAMSIWELMTKSGFVEDSVTYGILVHGFCKNGYINKSLHILEIAEQ 122
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G V ++ + LC A+ + + GCK + Y L++ L G K
Sbjct: 123 KGGVLDAFAYSAMINALCKESKLEKAVSVLNGMIRSGCKPNTHVYNALIKGLIGASKRDD 182
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ ++ EM + P + Y +I GLC + A +++E L KG PS + YS L
Sbjct: 183 AVRIFREMGTTDCPPNIATYSILIDGLCKGERFGEAYDLVKEMLEKGLNPSVITYSLLMK 242
Query: 521 KLLASNKLESAYNLFRKI 538
L +K+E A L+ ++
Sbjct: 243 GLCLGHKVEMALQLWNQV 260
>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 822
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 186/439 (42%), Gaps = 54/439 (12%)
Query: 149 FFNWAIKHP------NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
FF+WA P NVA Y+ ++K + + + F + VL DM P LE L+
Sbjct: 78 FFHWASTLPFSSPLNNVA-----YSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALN 132
Query: 203 IVMDSFIRAGQVYKAIQM----------------------------------------LG 222
V+ + G V KA++M L
Sbjct: 133 SVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLE 192
Query: 223 RLEDFGLKF--DAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSK 279
R D GL D S+ +V+ LC V L + G + NV+ YN++I G+ K
Sbjct: 193 RGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCK 252
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G + RV +E+ +GF P T+ LI+G +AG+ ++ + M G +
Sbjct: 253 KGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKV 312
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
+N++I G D+ + + M+ CEP++ TY LI+ ++ +A E E
Sbjct: 313 FNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAK 372
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
+R ++P+ + T + C G A M K + G K L +Y + G+
Sbjct: 373 ERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEID 432
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ L + +M E G D +IY +++GLC G+ A L++ E L P +Y+ L
Sbjct: 433 VALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLV 492
Query: 520 NKLLASNKLESAYNLFRKI 538
+ + +N+L+ A LF +
Sbjct: 493 DGFIRNNELDKATELFEVV 511
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 179/403 (44%), Gaps = 17/403 (4%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SY ++ A ++ + ++L +A+ G PDL + + + G++ A+ + ++
Sbjct: 382 SYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKM 441
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
+ G+ DA+ NV++ LC++ AA L + M L + Y ++ G+ + ++
Sbjct: 442 MEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNEL 501
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ + + ++++G P + ++ +I+GL + G++ DA+ + MK PD ++ V
Sbjct: 502 DKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTV 561
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I Y+ D D +K + M +PN+ YT LI+G K ++ A +VF M +
Sbjct: 562 IDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNL 621
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML-- 461
P+ T T + G P A ++ C + T + L+ L+ +L
Sbjct: 622 EPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIE 681
Query: 462 ----------LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
LD + M G+ Y +I LC G ++ A L+ + LRKGF
Sbjct: 682 KNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMD 741
Query: 512 RLVYSKLSNKLLASNKLESAYNL----FRKIKIARQNDYARRL 550
+ +S L + L + K + N+ KI +Y+ +L
Sbjct: 742 SVCFSALLHGLCQTGKSKEWRNIISGDLTKIDFQTAFEYSLKL 784
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 164/387 (42%), Gaps = 11/387 (2%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV YNVI+ ++ V ++ +G P LET ++D F +AG+
Sbjct: 238 PNVV----FYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQV 293
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVIS 275
Q+L + GL + + N ++ + V A+ + M + ++ TYNI+I+
Sbjct: 294 VDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILIN 353
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G++ E E L+ P+ +++ L+ + G A ++ + E G P
Sbjct: 354 FSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKP 413
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D +Y A I ++ G+ D + + M P+ Y L+SGL K + A +
Sbjct: 414 DLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLL 473
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
EMLD + P + ++ A +++ G + Y ++++ G
Sbjct: 474 SEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIK---GL 530
Query: 456 GKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
KCG + D ++M+ + + D + VI G L++A+ + + +++ + P+
Sbjct: 531 CKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNV 590
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKIK 539
+ Y+ L N + A +FR ++
Sbjct: 591 VAYTSLINGFCKIADMSRAEKVFRAMQ 617
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 92/228 (40%), Gaps = 42/228 (18%)
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK-YYKGMSSYNCEPNMDTYTRLISGL 382
V + MK + P A N+VI Y G D+ +K +Y YNC P + L++ L
Sbjct: 115 VLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCL 174
Query: 383 LKSRKVADALEVFEEMLDRG------IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+K+ KV A E++++ML+RG +V +I ++ LC G ++ RK
Sbjct: 175 VKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGK-------VEEGRK- 226
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
++ D W +G + Y +I G C G L+ A
Sbjct: 227 -----------------------LIDDRWG----NGCVPNVVFYNVIIDGYCKKGDLKRA 259
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
V EE KGF P+ Y L + + K + L ++ + N
Sbjct: 260 TRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLN 307
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 129/323 (39%), Gaps = 59/323 (18%)
Query: 90 RAVDEFLLPEERLRGVFLQKLKGKGVIEDA--LWNVNVDLSLD----VVGKVVN---RGN 140
+ +++ + P+ ++ V + L KG A L + +DL+L + +V+ R N
Sbjct: 440 KMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNN 499
Query: 141 LSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
+A LF + + V YNV++K L + + ++ M PD T
Sbjct: 500 ELDKATELF--EVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYT 557
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
S V+D +++ + A++M G++ K + + ++ C+ + A +F +M+
Sbjct: 558 HSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQ 617
Query: 261 GKVL-FNVMTYNIVISGWSKLG---------QVVEMERVLKE------------------ 292
L NV+TY I+I G+SK G +++ M L
Sbjct: 618 SFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTT 677
Query: 293 --------------------IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+++EG+S T++ +I L + G +D A + M KG
Sbjct: 678 LLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKG 737
Query: 333 CGPDTNAYNAVISNYISVGDFDE 355
D+ ++A++ G E
Sbjct: 738 FLMDSVCFSALLHGLCQTGKSKE 760
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 174/369 (47%), Gaps = 4/369 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR---AGQVY 215
V+ D+ ++N ++ L R +V D+ G+ P + T + ++D + + AG +Y
Sbjct: 187 VSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMY 246
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
+L + + G+ A + V++ C+ + AA +F MK + + +V+TYN +I
Sbjct: 247 HVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLI 306
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
SG G+V E ++++E+ G SP+ +TF +++G + G + DA + D M E+
Sbjct: 307 SGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVE 366
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD Y +I Y +G ++ M + M+ PN+ TY LI+G +S A +
Sbjct: 367 PDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGL 426
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+EM ++GI T + LC G A+ + + +VG + + Y +++
Sbjct: 427 LDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCD 486
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G ++ M++ ++ Y I C IG+++ A ++ E L K P+ +
Sbjct: 487 KGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGIT 546
Query: 515 YSKLSNKLL 523
Y + ++
Sbjct: 547 YETIKEGMM 555
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 161/391 (41%), Gaps = 37/391 (9%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HP S N ++ L K D + V+PD+ T + V+ R GQ+
Sbjct: 149 HPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLR 208
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVIS 275
KA + ++ +GL +V TYN +I
Sbjct: 209 KAGDVAKDIKAWGLAP----------------------------------SVATYNSLID 234
Query: 276 GWSKLGQVVEMERV---LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
G+ K G M V LKE+V G SP ++TF LI G + A+ VF+ MK++G
Sbjct: 235 GYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQG 294
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
YN++IS S G +E +K + M PN T+ ++ G K +ADA
Sbjct: 295 IAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADAN 354
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+ + M +R + P T ++ G AM + + K G ++T Y L+
Sbjct: 355 DWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGF 414
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
S G L EM+E G +D Y +I LC G++ AV +++E G P+
Sbjct: 415 SRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNH 474
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
L Y+ + ++SAY + +++ R+
Sbjct: 475 LTYNTIIQGFCDKGNIKSAYEIRTRMEKCRK 505
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 103/227 (45%), Gaps = 1/227 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++ ++K ++ + + M + V PD+ +I++D + R G++ A+ + +
Sbjct: 336 TFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAM 395
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
G+ + + N ++ + +AS L + MK K + +V+TYN++I G+V
Sbjct: 396 AKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEV 455
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ ++L E+ G P+ LT++ +I+G G I A E+ M++ + YN
Sbjct: 456 RKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVF 515
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
I + +G DE M PN TY + G+++ D
Sbjct: 516 IKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 90/169 (53%), Gaps = 1/169 (0%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
A+ ++ +V +YN ++ R + +L +M ++G+ D+ T ++++ + G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYN 271
+V KA+++L + + GL+ + + N ++ C + ++ +A + M K + NV+TYN
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
+ I + ++G++ E +L E++ + P+ +T+ + EG+ G D
Sbjct: 514 VFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 9/184 (4%)
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
G S P+ + L++GL+ +++V A + F L R + P T + + LC G
Sbjct: 146 GESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIG 205
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH------EMQESGYPS 475
A + K + G S+ Y L + G+ K G +++H EM E+G
Sbjct: 206 QLRKAGDVAKDIKAWGLAPSVATYNSL---IDGYCKKGGAGNMYHVDMLLKEMVEAGISP 262
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ +I G C AV V EE ++G S + Y+ L + L + K+E L
Sbjct: 263 TAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLM 322
Query: 536 RKIK 539
+++
Sbjct: 323 EEME 326
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 160/352 (45%), Gaps = 36/352 (10%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+V DV YN I+ +L + K C+V S+M +G++PD+ T + ++ F G
Sbjct: 192 SVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMG----- 246
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
H+ A SL N MK K + NV T+NI+I
Sbjct: 247 ------------------------------HLKEAFSLLNEMKLKNINPNVCTFNILIDA 276
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
SK G++ E + +L ++ PD T++ LI+G + A VF +M ++G PD
Sbjct: 277 LSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPD 336
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y +I+ DE M ++ M N P++ TY LI GL K+ + A+ + +
Sbjct: 337 VQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCK 396
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
M ++GI P + T L+ LC G A ++++ G L++ AY +L+ RL G
Sbjct: 397 RMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAG 456
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
LDL +M++ G D ++ +I L + + A ++ E + +G
Sbjct: 457 FFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 181/388 (46%), Gaps = 6/388 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HPN + N ++K L R + +G D + +++ + G+
Sbjct: 124 HPNAI----TLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETK 179
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
++L +LE +K D N ++ LC+ +G A +++ M K + +V+TY +I
Sbjct: 180 AVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLI 239
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ +G + E +L E+ + +P+ TF+ LI+ L + G++ +A + M +
Sbjct: 240 HGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIK 299
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN++I Y V + + M+ P++ YT +I+GL K++ V +A+ +
Sbjct: 300 PDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSL 359
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
FEEM + ++P T S ++ LC A+ + K+ ++ G + + +Y +LL L
Sbjct: 360 FEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCK 419
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G+ +++ + GY + Y +I LC G + A+ + + KG P +
Sbjct: 420 SGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVT 479
Query: 515 YSKLSNKLLASNKLESAYNLFRKIKIAR 542
+ + L ++ + A + R++ IAR
Sbjct: 480 FDIIIRALFEKDENDKAEKILREM-IAR 506
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 163/375 (43%), Gaps = 3/375 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
+N I+ +L K + + ++ G+ PDL TLSI+++ F + A + +
Sbjct: 60 FNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 119
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
G +A +LN ++ LC R + A + + + + ++Y +I+G K G+
Sbjct: 120 KRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETK 179
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ R+L+++ PD + ++ +I L + + DA +V+ M KG PD Y +I
Sbjct: 180 AVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLI 239
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ +G E M N PN+ T+ LI L K K+ +A + M+ I
Sbjct: 240 HGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIK 299
Query: 405 PSTGTITSFLEPLCSYGP-PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P T S ++ HA + Y A++ G + Y ++ L +
Sbjct: 300 PDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQR-GVTPDVQCYTNMINGLCKTKMVDEAMS 358
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L+ EM+ D Y +I GLC LE A+ + + +G P Y+ L + L
Sbjct: 359 LFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLC 418
Query: 524 ASNKLESAYNLFRKI 538
S +LE A +F+++
Sbjct: 419 KSGRLEDAKEIFQRL 433
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 127/252 (50%), Gaps = 1/252 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K N+ +V ++N+++ AL + +L+ M K + PD+ T + ++D + +
Sbjct: 258 MKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDE 317
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
V A + + G+ D + ++ LC+ V A SLF MK K ++ +++TYN
Sbjct: 318 VKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNS 377
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G K + + K + +G PD +++ L++GL ++GR++DA E+F + KG
Sbjct: 378 LIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKG 437
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
+ +AY +I+ G FDE + M C P+ T+ +I L + + A
Sbjct: 438 YHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAE 497
Query: 393 EVFEEMLDRGIV 404
++ EM+ RG++
Sbjct: 498 KILREMIARGLL 509
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 151/371 (40%), Gaps = 69/371 (18%)
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++ S + I + + E G+ D +L++++ C C + H+ A S+F +
Sbjct: 63 ILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFAN----- 117
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
I+ GF P+++T + LI+GL G I A+
Sbjct: 118 -----------------------------ILKRGFHPNAITLNTLIKGLCFRGEIKKALY 148
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
D + +G D +Y +I+ G+ + + + ++ +P++ Y +I+ L
Sbjct: 149 FHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLC 208
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
K++ + DA +V+ EM+ +GI P T T+ + C G A + + + ++
Sbjct: 209 KNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVC 268
Query: 444 AYKLLLRRLSGFGK--------------C--------GMLLD-------------LWHEM 468
+ +L+ LS GK C L+D +++ M
Sbjct: 269 TFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSM 328
Query: 469 QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
+ G D + Y +I GLC ++ A+ + EE K P + Y+ L + L ++ L
Sbjct: 329 AQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHL 388
Query: 529 ESAYNLFRKIK 539
E A L +++K
Sbjct: 389 ERAIALCKRMK 399
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 96/224 (42%)
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A+ F+ M P T +N ++S+ ++ + + +K P++ T + LI+
Sbjct: 41 AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
+ A VF +L RG P+ T+ + ++ LC G A+ + + G +L
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQL 160
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+Y L+ L G+ + L +++ D +Y +I LC L +A V
Sbjct: 161 DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY 220
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
E + KG P + Y+ L + L+ A++L ++K+ N
Sbjct: 221 SEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNIN 264
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 87/233 (37%)
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
P + F+ ++ L I +F + G PD + +I+ +
Sbjct: 54 PPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFS 113
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
+ + PN T LI GL ++ AL ++++ +G + + + LC
Sbjct: 114 VFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLC 173
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
G A + +K K + Y ++ L G D++ EM G D
Sbjct: 174 KTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVV 233
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
Y +I G C +G L+ A ++ E K P+ ++ L + L K++ A
Sbjct: 234 TYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEA 286
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 183/385 (47%), Gaps = 7/385 (1%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N+ +V++ + ++ L + + F + + + GV PD T S V+ S +A
Sbjct: 185 NLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRA 244
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISG 276
+ + +E G + NV++ LC+ V A + S+ GK L +V+TY ++ G
Sbjct: 245 KEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLG 304
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ +L Q +++ E+V GFSP S L++GL + G+IDDA E+ + G P+
Sbjct: 305 FCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPN 364
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YNA+I++ GD D+ Y MS N PN TY+ LI +S ++ A+ F+
Sbjct: 365 LFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFD 424
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
M+ GI + S + C +G AA ++ + G + + T + L +SG+
Sbjct: 425 RMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSL---ISGYC 481
Query: 457 K---CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
K L+++M ++G + + +I+GLC+ ++ A + +E + + P+ +
Sbjct: 482 KDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEV 541
Query: 514 VYSKLSNKLLASNKLESAYNLFRKI 538
Y+ L K++ A+ L +
Sbjct: 542 TYNVLIEGYCRDGKIDKAFELLEDM 566
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 171/371 (46%), Gaps = 3/371 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ +YNV++ L + V + +G+ D+ T ++ F R Q IQ++
Sbjct: 260 IVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMD 319
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--NVMTYNIVISGWSKL 280
+ + G +++ ++ L ++ + A L + G+ F N+ YN +I+ K
Sbjct: 320 EMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKV-GRFGFVPNLFVYNALINSLCKG 378
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + + E + + P+ +T+S LI+ R+GR+D AI FD M + G G AY
Sbjct: 379 GDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAY 438
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N++I+ GD + M++ EP T+T LISG K +V A +++ +M+D
Sbjct: 439 NSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMID 498
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
GI P+ T T+ + LCS A ++ + + K + Y +L+ GK
Sbjct: 499 NGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDK 558
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+L +M + G D Y +I+GLC+ G++ A +++ ++ + + YS L +
Sbjct: 559 AFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLH 618
Query: 521 KLLASNKLESA 531
+L A
Sbjct: 619 GYCQEGRLMEA 629
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 153/348 (43%), Gaps = 4/348 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YNV+++ R D +L DM ++G+ PD T ++ G+V KA + L
Sbjct: 542 TYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDL 601
Query: 225 EDFGLKFDAESLNVVLWCLCQ--RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQ 282
+K + + +L CQ RL ++S +G + +++ + ++I G K
Sbjct: 602 HKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRG-INMDLVCHAVLIDGALKQPD 660
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+LK++ +G PD++ ++ +I+ + G A E +D M + C P+ Y A
Sbjct: 661 RKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTA 720
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
+++ G+ D +K M + N PN TY + L K + +A+ + ML +G
Sbjct: 721 LMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML-KG 779
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
++ +T T + C G H A + + + G Y L+ G G +
Sbjct: 780 LLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASV 839
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
LW M G D Y +I G C G+L+ A + ++ LR+G P
Sbjct: 840 KLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIP 887
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 173/381 (45%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+A DV +Y +V R + F+ ++ +M + G +P +S ++D + G++ A
Sbjct: 291 LAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAY 350
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+++ ++ FG + N ++ LC+ + A L+++M L N +TY+I+I +
Sbjct: 351 ELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSF 410
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G++ ++ +G ++ LI G + G + A +F M KG P
Sbjct: 411 CRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTA 470
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+ ++IS Y + K Y M PN+ T+T LISGL + K+A+A E+F+E
Sbjct: 471 TTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDE 530
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+++R I P+ T +E C G A + + + G Y+ L+ L G+
Sbjct: 531 LVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGR 590
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
D ++ + + Y ++ G C G+L A+ E +++G + ++
Sbjct: 591 VSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAV 650
Query: 518 LSNKLLASNKLESAYNLFRKI 538
L + L ++ ++L + +
Sbjct: 651 LIDGALKQPDRKTFFDLLKDM 671
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 169/377 (44%), Gaps = 2/377 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +V ++ ++ L + ++ + + P T +++++ + R G++ KA
Sbjct: 501 ITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAF 560
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++L + GL D + ++ LC V A + + K V N M Y+ ++ G+
Sbjct: 561 ELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGY 620
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G+++E E++ G + D + + LI+G + ++ M ++G PD
Sbjct: 621 CQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDN 680
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y ++I Y G F + + + M + C PN+ TYT L++GL K+ ++ A +F+
Sbjct: 681 VIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKR 740
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M + P++ T FL+ L G A+ ++ K G + + +++R G+
Sbjct: 741 MQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGR 799
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+ EM E+G D Y +I C G + +V + + L +G P + Y+
Sbjct: 800 FHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNL 859
Query: 518 LSNKLLASNKLESAYNL 534
L + +L+ A+ L
Sbjct: 860 LIYGCCVNGELDKAFEL 876
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 173/413 (41%), Gaps = 42/413 (10%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMC--NVLSDMAKEGVNPDLETL 201
+ + +F+ I+ + + V +YN ++ G+ KF D ++ +M +GV P T
Sbjct: 417 DVAISYFDRMIQ-DGIGETVYAYNSLIN--GQCKFGDLSAAESLFIEMTNKGVEPTATTF 473
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-K 260
+ ++ + + QV KA ++ ++ D G+ + + ++ LC + AS LF+ + +
Sbjct: 474 TSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVE 533
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
K+ +TYN++I G+ + G++ + +L+++ +G PD+ T+ LI GL GR+
Sbjct: 534 RKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSK 593
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK---------------------- 358
A + D + ++ + Y+A++ Y G E +
Sbjct: 594 AKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLID 653
Query: 359 -------------YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
K M P+ YT +I K A E ++ M+ P
Sbjct: 654 GALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFP 713
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLW 465
+ T T+ + LC G A +++K+ + + Y L L+ G + L
Sbjct: 714 NVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLH 773
Query: 466 HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
H M + G ++ + +I G C +G+ A V+ E G P + YS L
Sbjct: 774 HAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTL 825
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 171/414 (41%), Gaps = 46/414 (11%)
Query: 169 IVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
+V L ++ D ++ + + G P+L + +++S + G + KA + +
Sbjct: 336 LVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMN 395
Query: 229 LKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEME 287
L+ + + ++++ C+ + A S F+ M + + V YN +I+G K G + E
Sbjct: 396 LRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAE 455
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
+ E+ +G P + TF+ LI G + ++ A ++++ M + G P+ + A+IS
Sbjct: 456 SLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGL 515
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
S E + + + +P TY LI G + K+ A E+ E+M +G+VP T
Sbjct: 516 CSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDT 575
Query: 408 GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK--------CG 459
T + LCS G A K KL+ Y LL G+ C
Sbjct: 576 YTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCE 635
Query: 460 ML---------------------------LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
M+ DL +M + G D IY +I G
Sbjct: 636 MIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGS 695
Query: 493 LENA-----VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
+ A ++V EE P+ + Y+ L N L + +++ A LF++++ A
Sbjct: 696 FKKAFECWDLMVTEECF-----PNVVTYTALMNGLCKAGEMDRAGLLFKRMQAA 744
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/408 (20%), Positives = 171/408 (41%), Gaps = 18/408 (4%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL---------- 198
FFN+ H N+ SY ++V AL + F ++L + +P
Sbjct: 89 FFNFLGLHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLRESHPKCVFSHFLDSYK 148
Query: 199 -----ETL--SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
TL ++++ +++ + +++ A+ ++ + L + +L+ +L L +
Sbjct: 149 RCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFIT 208
Query: 252 ASSLFN-SMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
LF+ S+ V + T + V+ +L + + ++ + A GF +T++ LI
Sbjct: 209 VWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIH 268
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
GL + R+ +A+EV ++ KG D Y ++ + + F+ ++ M P
Sbjct: 269 GLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSP 328
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
+ L+ GL K K+ DA E+ ++ G VP+ + + LC G A ++Y
Sbjct: 329 TEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLY 388
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
+ + + Y +L+ G+ + + + M + G Y +I G C
Sbjct: 389 SNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKF 448
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G L A + E KG P+ ++ L + +++ A+ L+ K+
Sbjct: 449 GDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKM 496
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 117/288 (40%), Gaps = 35/288 (12%)
Query: 253 SSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
S +S K + + +N+++ + ++ + ++K + A P+ T S L+ GL
Sbjct: 141 SHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGL 200
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
+ + E+FD G PD +AV+ + + DF + + M + + ++
Sbjct: 201 LKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSI 260
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
TY LI GL K +V++A+EV + +G+ T + + C
Sbjct: 261 VTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFC-------------- 306
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
RL F L+D EM E G+ ++ GL G+
Sbjct: 307 ------------------RLQQFEAGIQLMD---EMVELGFSPTEAAVSGLVDGLRKQGK 345
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+++A ++ + R GF P+ VY+ L N L L+ A L+ + +
Sbjct: 346 IDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSL 393
>gi|115489794|ref|NP_001067384.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|77556813|gb|ABA99609.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649891|dbj|BAF30403.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|125580213|gb|EAZ21359.1| hypothetical protein OsJ_37016 [Oryza sativa Japonica Group]
Length = 859
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 129/253 (50%), Gaps = 2/253 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +YN I+ A GR + V +M K G PD T ++D + G + A+ +
Sbjct: 401 VVTYNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYT 460
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLG 281
R+++ GL D + + ++ CL + H+ AA LF M + N++TYNI+I+ +K
Sbjct: 461 RMQEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKAR 520
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ ++ K++ GF PD +T+S ++E LG G +D+A VF M+ PD Y
Sbjct: 521 NYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHD-WAPDEPVYG 579
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++ + G+ D+ + +Y M +PN+ T L+S LK + DA V + ML +
Sbjct: 580 LLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQ 639
Query: 402 GIVPSTGTITSFL 414
G+VPS T T L
Sbjct: 640 GLVPSLQTYTLLL 652
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 144/330 (43%), Gaps = 11/330 (3%)
Query: 198 LETLSIVMDSFIRAGQVYKAIQ----MLGRLE----DFGLKFDAESLNVVLWCLCQRLHV 249
L+ L +D+F +A QV K + LG + G K D S ++ L Q
Sbjct: 324 LDNLHCKIDAF-QANQVLKLLHDHTIALGFFQWLKRQPGFKHDGHSYTTMIGILGQARQF 382
Query: 250 GAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
G L + M V+TYN +I + + + E +V +E+ G+ PD +T+ L
Sbjct: 383 GTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTL 442
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I+ + G ++ A++++ M+E G PDT Y+A+++ G K + M C
Sbjct: 443 IDIHAKGGYLEFAMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGC 502
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
PN+ TY +I+ K+R + ++++++M G P T + +E L G A
Sbjct: 503 TPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEA 562
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++ + R Y LL+ G L +H M + G + +++
Sbjct: 563 VFIEMRHDWAP-DEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFL 621
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
I + ++A V++ L +G PS Y+ L
Sbjct: 622 KINRFQDAYSVLQNMLAQGLVPSLQTYTLL 651
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 4/219 (1%)
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
++ G D ++Y +I F K M+S +C+P + TY R+I ++ +
Sbjct: 358 RQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYL 417
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A++VFEEM G P T + ++ G AM +Y + ++VG Y +
Sbjct: 418 REAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVGLSPDTFTYSAM 477
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L G L+ EM E+G + Y +IA EN V + ++ GF
Sbjct: 478 VNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGF 537
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYA 547
P ++ YS + L L+ A +F I ++D+A
Sbjct: 538 RPDKITYSIVMEVLGHCGHLDEAEAVF----IEMRHDWA 572
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 81/187 (43%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D +Y+ +V LG+ + +M + G P+L T +I++ +A +
Sbjct: 467 LSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVV 526
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
++ ++ G + D + ++V+ L H+ A ++F M+ + Y +++ W
Sbjct: 527 KLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHDWAPDEPVYGLLVDLWG 586
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G V + ++ +G P+ T + L+ + R DA V M +G P
Sbjct: 587 KAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQ 646
Query: 339 AYNAVIS 345
Y ++S
Sbjct: 647 TYTLLLS 653
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 164/348 (47%), Gaps = 2/348 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN +VK K + + M ++GV P++ET + ++D + R+ + Q+L +
Sbjct: 429 TYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEM 488
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
E GLK + S ++ CLC+ ++ A + M + V+ N YN++I G G++
Sbjct: 489 EKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKL 548
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ R E+VA P +T++ LI GL + G++ +A + + KG D YN++
Sbjct: 549 KDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSL 608
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS Y S G+ + ++ Y+ M +P ++TY RLI+G K V ++++EML +
Sbjct: 609 ISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVL-VEKIYQEMLQMNL 667
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
VP + + +G A ++ G + Y L+ G+ + +
Sbjct: 668 VPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKN 727
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L ++M+ G E Y+ +I G C + + A + E GF PS
Sbjct: 728 LVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPS 775
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 137/286 (47%), Gaps = 35/286 (12%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V +V++YN ++ GR FD +L +M K+G+ P++ + +++ + + +A
Sbjct: 458 VLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAE 517
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+LG + G+ +A+ N+++ C + A F+ M + ++ ++TYNI+I+G
Sbjct: 518 VILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGL 577
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG----- 332
K G+V+E E + EI +G S D +T++ LI G AG + A+E+++TMK+ G
Sbjct: 578 CKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTL 637
Query: 333 ---------CG--------------------PDTNAYNAVISNYISVGDFDECMKYYKGM 363
CG PD YNA+I Y+ GD + + M
Sbjct: 638 NTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAM 697
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
+ +P+ TY LI G K ++ + +M RG++P T T
Sbjct: 698 EAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTET 743
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 169/377 (44%), Gaps = 6/377 (1%)
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
++++ AL + + VL + G+ P + +++ + + G + KA + ++E
Sbjct: 361 SILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEA 420
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVE 285
GL+ + + N ++ C+ ++ A M K VL NV TYN +I G+ +
Sbjct: 421 VGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDR 480
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
++L+E+ +G P+ +++ LI L + I +A + M +G P+ YN +I
Sbjct: 481 CFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLID 540
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
G + +++ M + P + TY LI+GL K KV +A + E+ +G+
Sbjct: 541 GSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSF 600
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL--D 463
T S + S G A+ +Y+ +K G K +L Y R ++G GK G++L
Sbjct: 601 DVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYH---RLIAGCGKEGLVLVEK 657
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
++ EM + D IY +I G ++ A + +G P ++ Y+ L
Sbjct: 658 IYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHF 717
Query: 524 ASNKLESAYNLFRKIKI 540
++ NL +KI
Sbjct: 718 KEGRMHKVKNLVNDMKI 734
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 146/350 (41%), Gaps = 34/350 (9%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M K+GV P + +L++ ++S + + +Q+ + + GL+ D
Sbjct: 138 MKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQ--------------- 182
Query: 249 VGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
Y I KLG + ++ + G SP ++ +
Sbjct: 183 -------------------FMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVV 223
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I GL + R+ DA ++FD M ++ P+ YN +I Y VG +E + M N
Sbjct: 224 IGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENV 283
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
EP + T+ L++GL +++ + +A V EEM G VP T T+ + G A++
Sbjct: 284 EPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASIT 343
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ ++A + G ++ +LL L G ++ + E+G G + ++ G C
Sbjct: 344 LSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYC 403
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+G + A +E+ G P+ + Y+ L K +E A +K+
Sbjct: 404 QVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKM 453
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 123/548 (22%), Positives = 235/548 (42%), Gaps = 64/548 (11%)
Query: 11 RYPLSSLSSSFSLFSFSTSVRSNLSYNELLS--NQKKNMSSLDEHHVL-KELSDLFQISS 67
+ P SS S ++LFS S++ L + LLS ++ K +S E ++L K+ L ++S
Sbjct: 90 KSPFSSPSHLYTLFSLSSTPMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVAS 149
Query: 68 HNSF------PNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLK---------G 112
N F Y+++ + ++S D+F+ + V L LK
Sbjct: 150 LNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMK 209
Query: 113 KGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKA 172
+G + ++ NV V+G + + +A LF + VA + +YN ++
Sbjct: 210 RGGVSPGVFVYNV-----VIGGLCKEKRMK-DAEKLFDEMLDRR--VAPNRITYNTLIDG 261
Query: 173 LGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
+ + N+ M E V P + T + +++ RA + +A ++L +E +G D
Sbjct: 262 YCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPD 321
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVL 290
+ + + +V A+ +L KG + + T +I+++ K G + + E VL
Sbjct: 322 RFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDY-TCSILLNALCKEGNMEKAEEVL 380
Query: 291 KEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV 350
K+ + G +P + F+ ++ G + G I+ A + M+ G P+ YN+++ + +
Sbjct: 381 KKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEM 440
Query: 351 GDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
+ +E K K M PN++TY LI G +S ++ EEM +G+ P+ +
Sbjct: 441 KNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISY 500
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+ LC K A + ++ +L D+ H
Sbjct: 501 GCLINCLC------------KDANILEAEV-------------------ILGDMVHR--- 526
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G + +IY +I G C G+L++A +E + + P+ + Y+ L N L K+
Sbjct: 527 -GVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVME 585
Query: 531 AYNLFRKI 538
A NL +I
Sbjct: 586 AENLASEI 593
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 146/302 (48%), Gaps = 17/302 (5%)
Query: 105 VFLQKLKGKGVIEDA-LWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDV 163
V L + +GV+ +A ++N+ +D S + GK+ + FF+ + + +
Sbjct: 518 VILGDMVHRGVVPNAQIYNMLIDGSC-IAGKLKD--------AFRFFDEMVAR-EIVPTL 567
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+YN+++ L ++ N+ S++ ++G++ D+ T + ++ + AG V KA+++
Sbjct: 568 VTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYET 627
Query: 224 LEDFGLKFDAESLNVV--LWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
++ G+K +LN L C + + ++ M + ++ + + YN +I + +
Sbjct: 628 MKKSGIK---PTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEH 684
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G V + + + A+G PD +T++ LI G + GR+ + + MK +G P T Y
Sbjct: 685 GDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETY 744
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +I + + DFD +Y+ M P++ LI+GL + + DA + EM
Sbjct: 745 DILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNM 804
Query: 401 RG 402
+G
Sbjct: 805 KG 806
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%)
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
L+S +S+ V+++ E++ M G++PS ++ FLE L S + ++ + + G
Sbjct: 118 LLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESG 177
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
+ Y ++ G ++L M+ G +Y VI GLC ++++A
Sbjct: 178 LRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAE 237
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+ +E L + P+R+ Y+ L + +LE A+N+ ++K+
Sbjct: 238 KLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKV 280
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/171 (18%), Positives = 75/171 (43%)
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P++ + + L+ +++ D L++F E+++ G+ P ++ G A+ +
Sbjct: 145 PSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIEL 204
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
++ G + Y +++ L + L+ EM + + Y +I G C
Sbjct: 205 MTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCK 264
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+GQLE A + E + P+ + ++ L N L + +E A + ++++
Sbjct: 265 VGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEV 315
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 157/322 (48%), Gaps = 1/322 (0%)
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
L S + + + V +A+++L + + G K D + NV++ +C+ + A N
Sbjct: 82 LSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLN 141
Query: 258 SMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
+M NV+T+NI++ G+ ++ E++L +++ +G SP +TF+ LI L R G
Sbjct: 142 NMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQG 201
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
+ AI++ + M GC P++ +YN ++ + D ++Y M S C P++ TY
Sbjct: 202 LLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYN 261
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
L++ L K KV A+E+ ++ +G P T + ++ L G A+ + + R+
Sbjct: 262 TLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRK 321
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G K + Y L+ LS GK + +H+++ G + Y ++ GLC Q + A
Sbjct: 322 GLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRA 381
Query: 497 VLVMEESLRKGFCPSRLVYSKL 518
+ + + K P+ Y+ L
Sbjct: 382 IDFLAYMISKRCKPTEATYTIL 403
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 123/247 (49%), Gaps = 1/247 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ V ++N+++ L R+ ++L M G P+ + + ++ F + ++ +AI
Sbjct: 183 CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAI 242
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM-TYNIVISGW 277
+ L + G D + N +L LC+ V A + N + K V+ TYN VI G
Sbjct: 243 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGL 302
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
SK+G+ ++L E+ +G PD +T+S L+ GL R G++D+AI+ F ++ G P+
Sbjct: 303 SKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNA 362
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN+++ D + + M S C+P TYT LI G+ +AL++ E
Sbjct: 363 ITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNE 422
Query: 398 MLDRGIV 404
+ RG+V
Sbjct: 423 LCSRGLV 429
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 129/275 (46%)
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
F++ ++ + K V + ++L E+ +G PD +T++ LI G+ + GR+D+AI+
Sbjct: 80 FSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 139
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
+ M GC P+ +N ++ + S G + + K M C P++ T+ LI+ L +
Sbjct: 140 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 199
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+ A+++ E+M G P++ + L C A+ GC +
Sbjct: 200 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 259
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y LL L GK + +++ +++ G Y VI GL +G+ E A+ +++E
Sbjct: 260 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 319
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
RKG P + YS L + L K++ A F ++
Sbjct: 320 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLE 354
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 167/369 (45%), Gaps = 18/369 (4%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +Y+ ++ L + + +M GV PD+ T +I++DSF +AG + +A +
Sbjct: 287 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 346
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ G + ++ + V A+ +F+ M N +TY ++ G K
Sbjct: 347 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 406
Query: 281 GQVVEMERVLKEIVA----------------EGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
G + + V +++ +P+ +T+ L++GL +A ++D A E+
Sbjct: 407 GNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHEL 466
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
D M GC P+ Y+A+I + G D + + M+ P++ TYT LI + K
Sbjct: 467 LDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFK 526
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
++ A++V +ML P+ T T+ ++ LC G A+ + + GC ++
Sbjct: 527 DGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVT 586
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y L+ L GK + LDL+ +M G + Y +I LC G L+ A L++ E +
Sbjct: 587 YTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGE-M 645
Query: 505 RKGFCPSRL 513
++ + P L
Sbjct: 646 KQTYWPKYL 654
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 163/378 (43%), Gaps = 17/378 (4%)
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNV 238
FD ++ +M ++G PD T S V+ A +V KA + ++ G+ D + +
Sbjct: 269 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 328
Query: 239 VLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
++ C+ + A LF M+ V+TY +I + K QV + + +V G
Sbjct: 329 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 388
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEV----------------FDTMKEKGCGPDTNAYN 341
P+ +T+ L++GL +AG I A EV F P+ Y
Sbjct: 389 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 448
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A++ D + M S CEPN Y LI G K+ K+ A EVF +M
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 508
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G +PS T TS ++ + G AM + + K C ++ Y ++ L G+
Sbjct: 509 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKA 568
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L L M+E G + Y +I GL G+++ ++ + + RKG P+ + Y L N
Sbjct: 569 LKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINH 628
Query: 522 LLASNKLESAYNLFRKIK 539
L A+ L+ A L ++K
Sbjct: 629 LCAAGLLDKARLLLGEMK 646
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 191/416 (45%), Gaps = 29/416 (6%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A +LF +K V DV +Y +++ + + + + +M G +P + T +
Sbjct: 306 KAFLLF--QEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTA 363
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
++ ++++A QV +A + R+ D G + + + ++ LC+ ++ A ++ + G
Sbjct: 364 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 423
Query: 263 ----------------VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
+ NV+TY ++ G K +V +L +++ G P+ + +
Sbjct: 424 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 483
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
LI+G +AG+ID A EVF M + G P + Y ++I G D MK M
Sbjct: 484 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 543
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
+C PN+ TYT +I GL + + AL++ M ++G P+ T T+ ++ L G +
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 603
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD----LWHEMQESGYPSDGEIYEY 482
+ ++ + + GC + Y++L+ L G LLD L EM+++ +P + Y
Sbjct: 604 LDLFTQMSRKGCSPNYVTYRVLINHLCAAG----LLDKARLLLGEMKQTYWPKYLQGYRC 659
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
I G ++ ++EE G P VY L + + +LE A L +++
Sbjct: 660 AIQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 713
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 124/520 (23%), Positives = 216/520 (41%), Gaps = 65/520 (12%)
Query: 70 SFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFL--QKLKGKGVIEDA-LWNVNVD 126
+F + + R V + V FL ++ FL Q++K GV D + + +D
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 331
Query: 127 LSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVL 186
+ L +A LF ++ + V +Y ++ A + K ++
Sbjct: 332 --------SFCKAGLIEQAQWLFEE--MRSVGCSPTVVTYTALIHAYLKAKQVPQANDIF 381
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL------EDFGLKFDAE-----S 235
M G P+ T ++D +AG + KA ++ +L D F E +
Sbjct: 382 HRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLA 441
Query: 236 LNVVLWC-----LCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERV 289
NVV + LC+ V A L ++M N + Y+ +I G+ K G++ + V
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501
Query: 290 LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYIS 349
++ G+ P T++ LI+ + + GR+D A++V M + C P+ Y A+I
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
+G+ ++ +K M C PN+ TYT LI GL K+ K+ +L++F +M +G P+ T
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 621
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL--------------LLRRLSGF 455
+ LC+ G A ++ + ++ L Y+ +L + +
Sbjct: 622 YRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESY 681
Query: 456 GKC------GMLLD-------------LWHEMQE--SGYPSDGEIYEYVIAGLCNIGQLE 494
G GML+D L EM E S +D ++Y +I LC Q+E
Sbjct: 682 GTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVE 741
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
A + E R+GF P V+ L L+ K + A L
Sbjct: 742 EAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 203/470 (43%), Gaps = 43/470 (9%)
Query: 104 GVFLQKLKGKGVIEDALWNVN-VDLSLDVVGKVVNRGNLSGEAMVLFFNWAI------KH 156
G F L +G DAL + D LD V + +SG +F+ A+ +
Sbjct: 79 GCFAHALCKEGRWADALDMIEREDFKLDTV---LCTHMISGLMEASYFDEAMSFLHRMRC 135
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
+ +V +Y ++ ++K + +++ M EG NP+ + ++ S+
Sbjct: 136 NSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAY 195
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLC--QRLHVGAASSLFNSMKGKVL--------FN 266
A ++L R+ G N+ + +C ++L L + G++L N
Sbjct: 196 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVN 255
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V + + G K + ++ +KE++ +GF PD+ T+S +I L A +++ A +F
Sbjct: 256 VANFARCLCGVGKFDKAFQL---IKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQ 312
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
MK G PD Y +I ++ G ++ ++ M S C P + TYT LI LK++
Sbjct: 313 EMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAK 372
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS----- 441
+V A ++F M+D G P+ T + ++ LC G A +Y A+ +G S
Sbjct: 373 QVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVY--AKLIGTSDSADSDF 430
Query: 442 -------------LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ Y L+ L K +L M SG + +Y+ +I G C
Sbjct: 431 YFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFC 490
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G++++A V + + G+ PS Y+ L +++ +L+ A + ++
Sbjct: 491 KAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 540
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 126/279 (45%), Gaps = 9/279 (3%)
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TYN ++ S GQV RV KE+ GF D T L + GR DA+++ +
Sbjct: 41 VTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIER 100
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
K DT +IS + FDE M + M +C PN+ TY L+SG LK ++
Sbjct: 101 EDFK---LDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQ 157
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ + M+ G P+ S + C+ A + + GC Y +
Sbjct: 158 LGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNI 217
Query: 448 LLRRLSGFGKCGM--LLDLWHEMQESGYPSDGEIYEYVIAG----LCNIGQLENAVLVME 501
+ + G K LLDL ++ ++ + + +A LC +G+ + A +++
Sbjct: 218 FIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIK 277
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
E +RKGF P YSK+ L + K+E A+ LF+++K+
Sbjct: 278 EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM 316
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 180/391 (46%), Gaps = 10/391 (2%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
FF IK+ + DV SYN+++ L + +DM GV PD+ T +I+ + F
Sbjct: 292 FFCMMIKY-GLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGF 350
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNV 267
G + A +++ R+ GL D + +++ CQ ++ + L M + L ++
Sbjct: 351 RILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSI 410
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TY +++S K G++ E +L E+ G PD LT+S G +++AIE+++
Sbjct: 411 VTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS--------RGAVEEAIELYEE 462
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M K P++ +A+IS G E Y+ ++ + + Y +I G K
Sbjct: 463 MCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGN 522
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A+ +++++++GI P+ T S + C G A+ + + G + Y
Sbjct: 523 IGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTT 582
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L+ G + D+ HEM+ Y V+ GLC G+L +V +++ +G
Sbjct: 583 LMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARG 642
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P ++ Y+ + ++ L+ A+ L ++
Sbjct: 643 LFPDQITYNTVIQSFCKAHDLQKAFQLHNQM 673
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 175/374 (46%), Gaps = 9/374 (2%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ +Y V++ +L + D +L +M G+ PDL T S G V +AI++
Sbjct: 410 IVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS--------RGAVEEAIELYE 461
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLG 281
+ + ++ + ++ L ++ + A F+S+ K V ++ YNI+I G++KLG
Sbjct: 462 EMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLG 521
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ E R K+I+ +G SP +TF+ LI G + G++ +A+++ DT+K G P + Y
Sbjct: 522 NIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYT 581
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+++ Y GD M + +P TYT ++ GL K ++ +++++ + M R
Sbjct: 582 TLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYAR 641
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G+ P T + ++ C A ++ + + + S Y +L+ L +G
Sbjct: 642 GLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDA 701
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L +Q+ Y +I C G ++NA++ + + +GF S YS + N+
Sbjct: 702 DRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINR 761
Query: 522 LLASNKLESAYNLF 535
L N + A F
Sbjct: 762 LCKRNLITDAKFFF 775
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 172/387 (44%), Gaps = 9/387 (2%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
IK V ++ + +++ L R+ L + E P + + + +M F + G
Sbjct: 226 IKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGS 285
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
V A + +GL D S N++L LC + A N M+ V +++TYNI
Sbjct: 286 VDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNI 345
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+ +G+ LG + +V++ ++ G +PD +T++ LI G + G I+++ ++ + M +G
Sbjct: 346 LANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQG 405
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
Y ++S+ G DE + M +P++ TY+R V +A+
Sbjct: 406 LKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSR--------GAVEEAI 457
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
E++EEM + I P++ ++ + L G A M + K + Y +++
Sbjct: 458 ELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGY 517
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
+ G G + + ++ E G + +I G C G+L AV +++ G P+
Sbjct: 518 AKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTS 577
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKIK 539
+ Y+ L N + S +++ +++
Sbjct: 578 VTYTTLMNGYCEEGDMHSMFDMLHEME 604
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 155/360 (43%), Gaps = 17/360 (4%)
Query: 180 DFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVV 239
+ +CN D V D+ + ++ RA V+ A+ +L +++ L+ + N +
Sbjct: 155 ELLCNSFRDWDLNNVVWDM-----LACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSL 209
Query: 240 LWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
L+ L H ++N +K V N T I+I G + ++ + L+E E F
Sbjct: 210 LYNL---RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEF 266
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
P ++F+ L+ G + G +D A F M + G PD +YN ++ G +E ++
Sbjct: 267 GPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALE 326
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
+ M ++ EP++ TY L +G ++ A +V + ML G+ P T T + C
Sbjct: 327 FTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHC 386
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
G + + +K G KLS+ Y +LL L G+ + L HEM+ G D
Sbjct: 387 QMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLL 446
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y G +E A+ + EE K P+ V S + + L + A F +
Sbjct: 447 TYSR--------GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSV 498
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 121/285 (42%), Gaps = 1/285 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
I ++ + ++N ++ ++ +L + G+ P T + +M+ + G
Sbjct: 533 IIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGD 592
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
++ ML +E +K + VV+ LC+ + + L M + LF + +TYN
Sbjct: 593 MHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNT 652
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
VI + K + + ++ +++ P +T++ LI GL G + DA + T++++
Sbjct: 653 VIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQS 712
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
AY +I + + GD + ++ M E ++ Y+ +I+ L K + DA
Sbjct: 713 IRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAK 772
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
F ML GI P L G P++ ++ K G
Sbjct: 773 FFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCG 817
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 129/315 (40%), Gaps = 52/315 (16%)
Query: 236 LNVVLW----CLCQRLHVGAASSLFNSMKGKVL---FNVMTYNIVISGWSKLGQVVEMER 288
LN V+W C R + +LF K KVL ++ TYN S L M
Sbjct: 166 LNNVVWDMLACAYSRAEM-VHDALFVLAKMKVLNLQVSIATYN---SLLYNLRHTDIMWD 221
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
V EI A G + T LI+GL R R+ DA+ + GP ++NA++S +
Sbjct: 222 VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFC 281
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTG 408
+G D ++ M Y P++ +Y L+ GL + + +ALE +M + G+ P
Sbjct: 282 KMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPD-- 339
Query: 409 TITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM 468
+ Y +L +GF G++ W +
Sbjct: 340 ---------------------------------IVTYNILA---NGFRILGLISGAWKVV 363
Query: 469 QE---SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
Q +G D Y +I G C +G +E + + E+ L +G S + Y+ L + L S
Sbjct: 364 QRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKS 423
Query: 526 NKLESAYNLFRKIKI 540
+++ A L ++++
Sbjct: 424 GRIDEAVILLHEMEV 438
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 109/230 (47%), Gaps = 11/230 (4%)
Query: 182 MCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLW 241
M ++L +M + + P T ++V+ + G++++++Q+L + GL D + N V+
Sbjct: 596 MFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQ 655
Query: 242 CLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
C+ + A L N M + + + +TYN++I+G G + + +R+L + +
Sbjct: 656 SFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRL 715
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS-----NYISVGDFDE 355
+ ++ +I+ G + +A+ F M E+G Y+AVI+ N I+ F
Sbjct: 716 TKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFF 775
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
CM M ++ P+ D +++ +S E+F M+ G++P
Sbjct: 776 CM-----MLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820
>gi|297828902|ref|XP_002882333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328173|gb|EFH58592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 506
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 194/426 (45%), Gaps = 14/426 (3%)
Query: 125 VDLSLDVVGKVVNRGNLSGEAMVLFFNWA-----IKHPNVAKDVKSYNVIVKALGRRKFF 179
V+LS +V K+++R ++ + NWA KH N A Y++ V LG+ K +
Sbjct: 81 VNLSDGLVYKLLHRFRDDWKSALGVLNWAESCKGHKHSNDA-----YDMAVDILGKAKKW 135
Query: 180 DFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVV 239
D + + M + + L T++ +M F AG+ +A+ + +L +FGL+ + ES+N++
Sbjct: 136 DRLKVFVERMRGDKL-VTLNTIAKIMRRFAGAGEWEEAVGIFDKLGEFGLEKNTESMNLL 194
Query: 240 LWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS 299
L LC+ V A + +K + N T+NI I GW K +V E ++E+ GF
Sbjct: 195 LDTLCKEKRVEQARVVLLELKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFR 254
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P ++++ +I + E+ M+ G P++ Y ++S+ + +F+E ++
Sbjct: 255 PCVISYTTIIRCYCQQSEFVKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRV 314
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE-EMLDRGIVPSTGTITSFLEPLC 418
M C+P+ Y LI L +S ++ +A VF EM + G+ +T T S + C
Sbjct: 315 ATRMKRSGCQPDSLFYNCLIHTLARSGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYC 374
Query: 419 SYGPPHAAMMMYKKARKVG-CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS-D 476
+ A+ + K+ C + Y+ LLR G + L EM + S D
Sbjct: 375 HHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLD 434
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
Y ++I LC E A + EE + + P L ++ N ESA +
Sbjct: 435 ESTYTFLIQRLCRANICEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEH 494
Query: 537 KIKIAR 542
+K +
Sbjct: 495 IMKTVK 500
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 184/380 (48%), Gaps = 8/380 (2%)
Query: 168 VIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDF 227
VI+ LG+ F ++L D+ +GV+ D+ + ++ ++ G+ +A+ + +LE+
Sbjct: 190 VIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEE 249
Query: 228 GLKFDAESLNVVLWCLCQR-LHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVE 285
G + + NV+L + + + L +SMK V ++ TYN +IS + E
Sbjct: 250 GCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEE 309
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
V +E+ A GFSPD +T++ L++ G++ R +A+EV M+ G P YN++IS
Sbjct: 310 AAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLIS 369
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
Y G DE M+ M +P++ TYT L+SG K+ K A++VFEEM G P
Sbjct: 370 AYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQP 429
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM---LL 462
+ T + ++ + G M ++++ + C + + L L+ FG+ GM +
Sbjct: 430 NICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTL---LAVFGQNGMDSEVS 486
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
++ EM+ +G+ + + + +I+ G + A+ + L G P Y+ + L
Sbjct: 487 GVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAAL 546
Query: 523 LASNKLESAYNLFRKIKIAR 542
E + + ++K R
Sbjct: 547 ARGGLWEQSEKVLAEMKDGR 566
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 185/406 (45%), Gaps = 18/406 (4%)
Query: 120 LWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFF 179
L N V + + V+GK G S A +L +++ V D+ +Y ++ A +
Sbjct: 183 LSNSVVAVIISVLGK---EGRASFAASLLH---DLRNDGVHIDIYAYTSLITAYASNGRY 236
Query: 180 DFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ-MLGRLEDFGLKFDAESLNV 238
V + +EG P L T +++++ + + G + I ++ ++ G+ D + N
Sbjct: 237 REAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNT 296
Query: 239 VLWCLCQRLHV-GAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAE 296
++ C+R + A+ +F MK + +TYN ++ + K + E VLKE+ A
Sbjct: 297 LISS-CRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEAS 355
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
GF+P +T++ LI R G +D+A+E+ M +KG PD Y ++S + G D
Sbjct: 356 GFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYA 415
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
MK ++ M C+PN+ T+ LI + ++VFEE+ VP T + L
Sbjct: 416 MKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAV 475
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGY 473
G ++K+ ++ G + L +S + +CG + ++ M ++G
Sbjct: 476 FGQNGMDSEVSGVFKEMKRAGFVPERDTFNTL---ISAYSRCGFFDQAMAIYRRMLDAGV 532
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRLVYSKL 518
D Y V+A L G E + V+ E ++ G C P+ L Y L
Sbjct: 533 TPDLSTYNAVLAALARGGLWEQSEKVLAE-MKDGRCKPNELTYCSL 577
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 187/462 (40%), Gaps = 49/462 (10%)
Query: 107 LQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSY 166
+++K G D V + LDV GK EAM + ++ A + +Y
Sbjct: 314 FEEMKAAGFSPD---KVTYNALLDVYGK----SRRPREAMEVL--KEMEASGFAPSIVTY 364
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
N ++ A R D + S M K+G+ PD+ T + ++ F + G+ A+++ +
Sbjct: 365 NSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRV 424
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVE 285
G + + + N ++ R + +F +K + + +++T+N +++ + + G E
Sbjct: 425 AGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSE 484
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+ V KE+ GF P+ TF+ LI R G D A+ ++ M + G PD + YNAV++
Sbjct: 485 VSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLA 544
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
G +++ K M C+PN TY L+ ++V + EE+ I P
Sbjct: 545 ALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEP 604
Query: 406 S-----------------TGTITSFLEPLCSYGPP-----HAAMMMYKKARKV------- 436
T T +FLE P +A + +Y + R V
Sbjct: 605 QAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEIL 664
Query: 437 ------GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
G SLT Y L+ S D+ E+ G D + VI C
Sbjct: 665 NFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRN 724
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
G+++ A + E G P + Y N +AS +S +
Sbjct: 725 GRMKEASRIFAEMKDFGLAPDVITY----NTFIASYASDSMF 762
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 131/297 (44%), Gaps = 1/297 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K + ++N ++ A R FFD + M GV PDL T + V+ + R G
Sbjct: 492 MKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGL 551
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
++ ++L ++D K + + +L V S+L + G + +
Sbjct: 552 WEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKT 611
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
++ +SK + E ER E+ +GFSPD T + ++ GR + E+ + +K+ G
Sbjct: 612 LVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSG 671
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P YN+++ Y F++ + + + +P++ ++ +I ++ ++ +A
Sbjct: 672 FTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEAS 731
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
+F EM D G+ P T +F+ S A+ + K K GCK + Y L+
Sbjct: 732 RIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLI 788
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR-------- 210
V D+ +YN ++ AL R ++ VL++M P+ T ++ ++
Sbjct: 532 VTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMS 591
Query: 211 --AGQVYKAI-------------------------QMLGRLEDFGLKFDAESLNVVLWCL 243
A ++Y I + L + G D +LN ++
Sbjct: 592 ALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIY 651
Query: 244 CQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
+R V + + N +K ++ TYN ++ +S+ + E +L+EI+A+G PD
Sbjct: 652 GRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDI 711
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
++F+ +I R GR+ +A +F MK+ G PD YN I++Y S F E + K
Sbjct: 712 ISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKY 771
Query: 363 MSSYNCEPNMDTYTRLISGLLK 384
M C+PN +TY LI K
Sbjct: 772 MIKNGCKPNQNTYNSLIDWFCK 793
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 95/198 (47%), Gaps = 1/198 (0%)
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
++ ++G +PD+ TL+ ++ + R V K ++L ++D G + N +++ +
Sbjct: 631 ELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTE 690
Query: 248 HVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
H + + + K + +++++N VI + + G++ E R+ E+ G +PD +T++
Sbjct: 691 HFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYN 750
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
I +AI+V M + GC P+ N YN++I + + DE + + +
Sbjct: 751 TFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFISNLRNL 810
Query: 367 NCEPNMDTYTRLISGLLK 384
+ D RL+ L K
Sbjct: 811 DPSVTKDEERRLLERLNK 828
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 156/314 (49%), Gaps = 3/314 (0%)
Query: 228 GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK--GKVLFNVMTYNIVISGWSKLGQVVE 285
G++ + + +++L LC+ V A F++ +V++Y +I+G KLG+V
Sbjct: 5 GMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDA 64
Query: 286 MERVLKEIVAEG-FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ +++VA G P++ T++ L++GL + R+D A V +++ PD YN ++
Sbjct: 65 AFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLM 124
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ +G DE + + M+ P + ++ +I+GL ++R++ADALEVF EM+DR
Sbjct: 125 AALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFH 184
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P+ T + ++ LC A + + GC+ L AY L+ S G+ L L
Sbjct: 185 PNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGL 244
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLA 524
M G D Y VI LC +G++++A + E + P+ + YS L
Sbjct: 245 LRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCR 304
Query: 525 SNKLESAYNLFRKI 538
+++++ + R++
Sbjct: 305 ASRVDEGGKVMREM 318
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 166/353 (47%), Gaps = 6/353 (1%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML-GRLEDFGLKFDAESLNVVLWCLCQRL 247
M EG+ + T SI++ R G+V +A++ LE + D S ++ LC+
Sbjct: 1 MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60
Query: 248 HVGAASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
V AA LF M G N TYN ++ G K ++ V+ E F+PD +T+
Sbjct: 61 RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTY 120
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ L+ L + GR+D+A+ F M E+G P ++NA+I+ + ++ + M
Sbjct: 121 NTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMID 180
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
+ PN+ TY+ +I GL KS ++ +A ++ + M+ G P T + + G +
Sbjct: 181 RDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDS 240
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ + ++ GC + Y +++ +L G+ +++ E+ + + Y +I
Sbjct: 241 ALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIG 300
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G C +++ VM E + P+ + Y+ + L ++ E AY +FR++
Sbjct: 301 GYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREM 350
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 165/363 (45%), Gaps = 13/363 (3%)
Query: 100 ERLRGVFLQKLKGKGVIEDALWNVNVDLSL-----DVVGKVVNRGNLSG----EAMVLFF 150
+R + LQ L G + AL + + L L DVV L +A F
Sbjct: 10 DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 69
Query: 151 NWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR 210
+ + +YN +V L ++ D V+++ K PD+ T + +M + +
Sbjct: 70 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQ 129
Query: 211 AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMT 269
G+V +A+ ++ + G S N ++ LC+ + A +FN M + N++T
Sbjct: 130 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 189
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
Y++VI G K Q+ E +++L +V+EG PD + ++ L+ G AGR+D A+ + M
Sbjct: 190 YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 249
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
+GC PD Y VI VG D+ + ++ + + C PN+ TY+ LI G ++ +V
Sbjct: 250 SQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVD 309
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
+ +V EM R P+ T + + L A M+++ + G Y+ L
Sbjct: 310 EGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLK 366
Query: 450 RRL 452
R L
Sbjct: 367 RAL 369
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 164/363 (45%), Gaps = 27/363 (7%)
Query: 177 KFFDFMCN---------VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDF 227
K F+C+ + +M GV PD+ T +I++DSF +AG + +A + +
Sbjct: 293 KVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 352
Query: 228 GLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEM 286
G + ++ + V A+ +F+ M N +TY ++ G K G + +
Sbjct: 353 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 412
Query: 287 ERVLKEIVA----------------EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
V +++ +P+ +T+ L++GL +A ++D A E+ D M
Sbjct: 413 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 472
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
GC P+ Y+A+I + G D + + M+ P++ TYT LI + K ++
Sbjct: 473 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDL 532
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A++V +ML P+ T T+ ++ LC G A+ + + GC ++ Y L+
Sbjct: 533 AMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALID 592
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
L GK + LDL+ +M G + Y +I LC G L+ A L++ E +++ + P
Sbjct: 593 GLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGE-MKQTYWP 651
Query: 511 SRL 513
L
Sbjct: 652 KYL 654
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 163/378 (43%), Gaps = 17/378 (4%)
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNV 238
FD ++ +M ++G PD T S V+ A +V KA + ++ G+ D + +
Sbjct: 269 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 328
Query: 239 VLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
++ C+ + A LF M+ V+TY +I + K QV + + +V G
Sbjct: 329 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 388
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEV----------------FDTMKEKGCGPDTNAYN 341
P+ +T+ L++GL +AG I A EV F P+ Y
Sbjct: 389 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 448
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A++ D + M S CEPN Y LI G K+ K+ A EVF +M
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 508
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G +PS T TS ++ + G AM + + K C ++ Y ++ L G+
Sbjct: 509 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKA 568
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L L M+E G + Y +I GL G+++ ++ + + RKG P+ + Y L N
Sbjct: 569 LKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINH 628
Query: 522 LLASNKLESAYNLFRKIK 539
L A+ L+ A L ++K
Sbjct: 629 LCAAGLLDKARLLLGEMK 646
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 191/416 (45%), Gaps = 29/416 (6%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A +LF +K V DV +Y +++ + + + + +M G +P + T +
Sbjct: 306 KAFLLF--QEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTA 363
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
++ ++++A QV +A + R+ D G + + + ++ LC+ ++ A ++ + G
Sbjct: 364 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 423
Query: 263 ----------------VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
+ NV+TY ++ G K +V +L +++ G P+ + +
Sbjct: 424 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 483
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
LI+G +AG+ID A EVF M + G P + Y ++I G D MK M
Sbjct: 484 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 543
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
+C PN+ TYT +I GL + + AL++ M ++G P+ T T+ ++ L G +
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 603
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD----LWHEMQESGYPSDGEIYEY 482
+ ++ + + GC + Y++L+ L G LLD L EM+++ +P + Y
Sbjct: 604 LDLFTQMSRKGCSPNYVTYRVLINHLCAAG----LLDKARLLLGEMKQTYWPKYLQGYRC 659
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
I G ++ ++EE G P VY L + + +LE A L +++
Sbjct: 660 AIQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 713
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 124/520 (23%), Positives = 216/520 (41%), Gaps = 65/520 (12%)
Query: 70 SFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFL--QKLKGKGVIEDA-LWNVNVD 126
+F + + R V + V FL ++ FL Q++K GV D + + +D
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 331
Query: 127 LSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVL 186
+ L +A LF ++ + V +Y ++ A + K ++
Sbjct: 332 --------SFCKAGLIEQAQWLF--EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIF 381
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL------EDFGLKFDAE-----S 235
M G P+ T ++D +AG + KA ++ +L D F E +
Sbjct: 382 HRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLA 441
Query: 236 LNVVLWC-----LCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERV 289
NVV + LC+ V A L ++M N + Y+ +I G+ K G++ + V
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501
Query: 290 LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYIS 349
++ G+ P T++ LI+ + + GR+D A++V M + C P+ Y A+I
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
+G+ ++ +K M C PN+ TYT LI GL K+ K+ +L++F +M +G P+ T
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 621
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL--------------LLRRLSGF 455
+ LC+ G A ++ + ++ L Y+ +L + +
Sbjct: 622 YRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESY 681
Query: 456 GKC------GMLLD-------------LWHEMQE--SGYPSDGEIYEYVIAGLCNIGQLE 494
G GML+D L EM E S +D ++Y +I LC Q+E
Sbjct: 682 GTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVE 741
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
A + E R+GF P V+ L L+ K + A L
Sbjct: 742 EAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 203/470 (43%), Gaps = 43/470 (9%)
Query: 104 GVFLQKLKGKGVIEDALWNVN-VDLSLDVVGKVVNRGNLSGEAMVLFFNWAI------KH 156
G F L +G DAL + D LD V + +SG +F+ A+ +
Sbjct: 79 GCFAHALCKEGRWADALDMIEREDFKLDTV---LCTHMISGLMEASYFDEAMSFLHRMRC 135
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
+ +V +Y ++ ++K + +++ M EG NP+ + ++ S+
Sbjct: 136 NSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAY 195
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLC--QRLHVGAASSLFNSMKGKVL--------FN 266
A ++L R+ G N+ + +C ++L L + G++L N
Sbjct: 196 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVN 255
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V + + G K + ++ +KE++ +GF PD+ T+S +I L A +++ A +F
Sbjct: 256 VANFARCLCGVGKFDKAFQL---IKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQ 312
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
MK G PD Y +I ++ G ++ ++ M S C P + TYT LI LK++
Sbjct: 313 EMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAK 372
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS----- 441
+V A ++F M+D G P+ T + ++ LC G A +Y A+ +G S
Sbjct: 373 QVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVY--AKLIGTSDSADSDF 430
Query: 442 -------------LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ Y L+ L K +L M SG + +Y+ +I G C
Sbjct: 431 YFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFC 490
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G++++A V + + G+ PS Y+ L +++ +L+ A + ++
Sbjct: 491 KAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 540
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 126/279 (45%), Gaps = 9/279 (3%)
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TYN ++ S GQV RV KE+ GF D T L + GR DA+ D
Sbjct: 41 VTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADAL---DM 97
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
++ + DT +IS + FDE M + M +C PN+ TY L+SG LK ++
Sbjct: 98 IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQ 157
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ + M+ G P+ S + C+ A + + GC Y +
Sbjct: 158 LGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNI 217
Query: 448 LLRRLSGFGKCGM--LLDLWHEMQESGYPSDGEIYEYVIAG----LCNIGQLENAVLVME 501
+ + G K LLDL ++ ++ + + +A LC +G+ + A +++
Sbjct: 218 FIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIK 277
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
E +RKGF P YSK+ L + K+E A+ LF+++K+
Sbjct: 278 EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM 316
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 175/376 (46%), Gaps = 39/376 (10%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SYN+++ A + K D + +M G P T + ++ R ++ +A Q RL
Sbjct: 103 SYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERL 162
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQ 282
G + N+++ C+ V A L N + +G V+ + YN +I K G+
Sbjct: 163 LSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSA-PYNCIIDTLFKKGK 221
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ E E + +G P +TF+ LI+GL +A R+ A E+F + E G P +
Sbjct: 222 IHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSC 281
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
++ + G DE + ++ M++ C PN + LI+GL K+++++ A EVFEE++ R
Sbjct: 282 LMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQ 341
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
P T ++F++ LC H +AR+V C ML+
Sbjct: 342 AKPDVVTYSTFMDGLCR---AHRV----DQARQVLC---------------------MLV 373
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRLVYSKLSNK 521
D + G P D +Y +I+GLC++G+L+ A V E +R C P+ + L N
Sbjct: 374 D------KGGTP-DVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNG 426
Query: 522 LLASNKLESAYNLFRK 537
+ +L+ A LF++
Sbjct: 427 FGLAGRLDEARELFQR 442
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 156/336 (46%), Gaps = 1/336 (0%)
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
++I +DS ++ + KA L+DF + S N+++ C+ + A LF MK
Sbjct: 69 VNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMK 128
Query: 261 GK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
+ TYN +I G ++ ++ E ++ + +++ G +T++ L++G +A R+
Sbjct: 129 APGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVP 188
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
+A+E+ + + +G + YN +I G E ++ M P T+T LI
Sbjct: 189 EAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLI 248
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
GL K+ +VA A E+F L+ G PS + ++ C YG A +++ GC
Sbjct: 249 DGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCT 308
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
+ + +L+ L + +++ E+ + D Y + GLC +++ A V
Sbjct: 309 PNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQV 368
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ + KG P ++Y+ L + L + +L+ A +F
Sbjct: 369 LCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVF 404
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 124/249 (49%), Gaps = 2/249 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN I+ L ++ + M K+GV P T ++++D +A +V +A ++
Sbjct: 209 YNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYL 268
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
+ G + ++ C+ V A +F M + N ++ NI+I+G K ++
Sbjct: 269 ESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLS 328
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ V +E+V PD +T+S ++GL RA R+D A +V + +KG PD Y A+I
Sbjct: 329 QAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALI 388
Query: 345 SNYISVGDFDECMKYYK-GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
S S+G DE K ++ M + C PN T L++G + ++ +A E+F+ ++RG+
Sbjct: 389 SGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGV 448
Query: 404 VPSTGTITS 412
P T ++
Sbjct: 449 QPDCRTFSA 457
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 125/273 (45%), Gaps = 1/273 (0%)
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
NI I K + + E +E+ ++++++ LI + RID+AI++F MK
Sbjct: 70 NITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKA 129
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
GC P T+ YN +I V E ++Y+ + S + TY L+ G K+ +V +
Sbjct: 130 PGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPE 189
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A+E+ E++ RG V ++ ++ L G H A + + + K G + + +L+
Sbjct: 190 AVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLID 249
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
L + +++ ESG I ++ G C G ++ A + E +G P
Sbjct: 250 GLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTP 309
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
+ + + L N L + +L A +F ++ + RQ
Sbjct: 310 NDVSCNILINGLCKAKRLSQAREVFEEV-VKRQ 341
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 131/274 (47%), Gaps = 12/274 (4%)
Query: 114 GVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKAL 173
GV+ A +N +D +L GK+ LFFN K ++V ++ V++ L
Sbjct: 202 GVVTSAPYNCIID-TLFKKGKI--------HEAELFFNRMEKDGVRPQEV-TFTVLIDGL 251
Query: 174 GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA 233
+ + + G +P + S +MD F + G V +A ++ + + G +
Sbjct: 252 CKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPND 311
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
S N+++ LC+ + A +F + K + +V+TY+ + G + +V + +VL
Sbjct: 312 VSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCM 371
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT-MKEKGCGPDTNAYNAVISNYISVG 351
+V +G +PD + ++ LI GL GR+D+A +VF+ M+ GC P+ N +++ + G
Sbjct: 372 LVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAG 431
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
DE + ++ +P+ T++ + + K+
Sbjct: 432 RLDEARELFQRFVERGVQPDCRTFSAMANNTAKT 465
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 35/191 (18%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
S N+++ L + K V ++ K PD+ T S MD RA +V +A Q+L L
Sbjct: 313 SCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCML 372
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVV 284
D G D V+ Y +ISG LG++
Sbjct: 373 VDKGGTPD----------------------------------VVMYTALISGLCSLGRLD 398
Query: 285 EMERVLK-EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E +V + ++ A G +P++ T + L+ G G AGR+D+A E+F E+G PD ++A+
Sbjct: 399 EARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAM 458
Query: 344 ISNYISVGDFD 354
+N +D
Sbjct: 459 ANNTAKTEGWD 469
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 115/268 (42%), Gaps = 4/268 (1%)
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
M +IV+ +G++ E + +V++G L L+ L +AGR ++ ++V
Sbjct: 1 MNADIVLC-LCHVGKLDEALELFHSLVSDGCG---LPADLLVRELSKAGRAEECLKVVKL 56
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M ++ + + N I + D+ +++ + + N +Y LI+ K+++
Sbjct: 57 MLDRQQLRERHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKR 116
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A+++F EM G PST T + + LC A Y++ G S Y +
Sbjct: 117 IDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNI 176
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L+ + ++L +E+ G Y +I L G++ A L + G
Sbjct: 177 LVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDG 236
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLF 535
P + ++ L + L +N++ A +F
Sbjct: 237 VRPQEVTFTVLIDGLCKANRVARAKEIF 264
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 4/193 (2%)
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
VG DE ++ + + S C D R +S K+ + + L+V + MLDR +
Sbjct: 12 VGKLDEALELFHSLVSDGCGLPADLLVRELS---KAGRAEECLKVVKLMLDRQQLRERHL 68
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
+ ++ LC A +++ + ++ +Y +L+ + + L+ EM+
Sbjct: 69 VNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMK 128
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
G Y +I GLC + +L A E L G S + Y+ L + ++++
Sbjct: 129 APGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVP 188
Query: 530 SAYNLFRKIKIAR 542
A L ++ +AR
Sbjct: 189 EAVELLNEL-VAR 200
>gi|357159149|ref|XP_003578355.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Brachypodium distachyon]
Length = 857
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 131/253 (51%), Gaps = 2/253 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +YN I+ A GR + V +M + G PD T ++D +AG + A+ + G
Sbjct: 399 VVTYNRIIHAYGRANYLREAVKVFEEMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYG 458
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLG 281
R+++ GL D + + ++ CL + + AA LF M + N++TYNI+I+ +K
Sbjct: 459 RMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIIIALQAKAR 518
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ ++ +++ GF PD +T+S ++E LG G +D+A VF M+ + PD Y
Sbjct: 519 NYDNVVKLYRDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR-RDWAPDEPVYG 577
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++ + G+ D+ + +Y M +PN+ T L+S LK + DA V + ML +
Sbjct: 578 LLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQ 637
Query: 402 GIVPSTGTITSFL 414
G+VPS T T L
Sbjct: 638 GLVPSLQTYTLLL 650
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 148/330 (44%), Gaps = 11/330 (3%)
Query: 198 LETLSIVMDSFIRAGQVYKAIQ----MLGRLE----DFGLKFDAESLNVVLWCLCQRLHV 249
L++L +D+F +A QV K + LG G K D + ++ L Q
Sbjct: 322 LDSLHCKIDAF-QANQVLKLLHDHTMALGFFHWLKRQPGFKHDGHTYTTMIGILGQARQF 380
Query: 250 GAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
G +L + M + + V+TYN +I + + + E +V +E+ G+ PD +T+ L
Sbjct: 381 GIMRNLLHEMNRDRCKPTVVTYNRIIHAYGRANYLREAVKVFEEMEEAGYEPDRVTYCTL 440
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I+ +AG ++ A++++ M+E G PDT Y+A+++ G K + M C
Sbjct: 441 IDIHAKAGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGC 500
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
PN+ TY +I+ K+R + ++++ +M G P T + +E L G A
Sbjct: 501 TPNLVTYNIIIALQAKARNYDNVVKLYRDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEA 560
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++ + R+ Y LL+ G L +H M + G + +++
Sbjct: 561 VFIEMRRDWAP-DEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFL 619
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
I + ++A V++ L +G PS Y+ L
Sbjct: 620 KINRFQDAYSVLQNMLAQGLVPSLQTYTLL 649
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%)
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
++ G D + Y +I F M+ C+P + TY R+I ++ +
Sbjct: 356 RQPGFKHDGHTYTTMIGILGQARQFGIMRNLLHEMNRDRCKPTVVTYNRIIHAYGRANYL 415
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A++VFEEM + G P T + ++ G AM +Y + ++VG Y +
Sbjct: 416 REAVKVFEEMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQEVGLSPDTFTYSAM 475
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L G+ L+ EM E+G + Y +IA +N V + + GF
Sbjct: 476 VNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQVAGF 535
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P ++ YS + L L+ A +F +++
Sbjct: 536 RPDKITYSIVMEVLGHCGHLDEAEAVFIEMR 566
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 94/222 (42%), Gaps = 35/222 (15%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D +Y+ +V LG+ + +M + G P+L T +I++ +A +
Sbjct: 465 LSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIIIALQAKARNYDNVV 524
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
++ ++ G + D + ++V+ L H+ A ++F
Sbjct: 525 KLYRDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVF---------------------- 562
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
+EM R ++PD + L++ G+AG +D A+ + M + G P+
Sbjct: 563 -----IEMRR--------DWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVP 609
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
N+++S ++ + F + + M + P++ TYT L+S
Sbjct: 610 TCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLLS 651
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 173/376 (46%), Gaps = 1/376 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y+ ++ L R + + M EGV P+L + V+++ + G V A ++ ++
Sbjct: 352 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 411
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ + D + ++ C++ + +A +FN M K N +TY+ +I+G G+V
Sbjct: 412 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 471
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E +++E++ G P + T + I L G +DA +F MK KGC P+ Y A+
Sbjct: 472 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 531
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS G + + MS PN TY LI+ L+++R++ A V M G+
Sbjct: 532 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGL 591
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
+ T ++ C G P AM++ + G +L Y +++ G L
Sbjct: 592 FTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 651
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ M++ G D Y +I G C I ++E+A + E + G CP+ + Y+ L +
Sbjct: 652 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 711
Query: 524 ASNKLESAYNLFRKIK 539
KL++A +L +K
Sbjct: 712 KDEKLDTATSLLEHMK 727
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 171/384 (44%), Gaps = 8/384 (2%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K+ +V +Y ++ L + M+++GV P+ T + +++ + +
Sbjct: 516 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 575
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYN 271
+ A +L + GL + + N ++ C A + N+M +G N++TYN
Sbjct: 576 IKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA-NLVTYN 634
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
+I G+ G R+L + G PD +++ LI G + +++ A +F+ M +
Sbjct: 635 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 694
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G P+ Y A+I Y D + M C PN+ TY LI GL K + A
Sbjct: 695 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 754
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
E+ + M++ GI P+ T T+ ++ LC G A+ M+ K + GC +L Y L+R
Sbjct: 755 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 814
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L GK +L+ E++ G D Y +I G++E+A + ++ G P+
Sbjct: 815 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPT 874
Query: 512 RLVYSKL-----SNKLLASNKLES 530
Y L + LLA +L +
Sbjct: 875 LWTYGVLIKGLKNEYLLADQRLAA 898
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 176/417 (42%), Gaps = 36/417 (8%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D +Y ++ R+ D V + MAKEG P+ T S +++ +G+V +A
Sbjct: 416 MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAF 475
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ + G+ A + + LC A LF MK K NV TY +ISG
Sbjct: 476 DLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGL 535
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL----------------GRAGRIDD- 320
G + + + +G P+++T++ LI L GR G +
Sbjct: 536 CVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNI 595
Query: 321 ------------------AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
A+ V + M ++G + YN +I Y G+ ++
Sbjct: 596 VTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDL 655
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M C+P+ +YT LI G K K+ A +F EM+D G+ P+ T T+ ++ C
Sbjct: 656 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 715
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A + + ++ GC+ ++ Y +L+ L+ +L M E G + Y
Sbjct: 716 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 775
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I GLC G A+ + + + +G P+ L YS L L K+E A NLF +++
Sbjct: 776 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 832
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 160/358 (44%), Gaps = 2/358 (0%)
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
DM +G P++ T + ++ +G + AI + R+ G+ + + N ++ L +
Sbjct: 515 DMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENR 574
Query: 248 HVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
+ A + N M LF N++TYN +I G+ LG + V+ ++ G S + +T++
Sbjct: 575 RIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 634
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
+I+G +G A+ + D M++ GC PD +Y +I + + + + M
Sbjct: 635 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 694
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
PN TYT LI G K K+ A + E M G P+ T + L A
Sbjct: 695 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 754
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ K + G ++ Y ++ L G + L+++++M E G + Y +I
Sbjct: 755 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 814
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN-LFRKIKIARQ 543
L G++E A + E R G P + Y K+ + S K+E A+N L R IK Q
Sbjct: 815 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQ 872
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 130/306 (42%), Gaps = 35/306 (11%)
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+ Y+ ++ S+LG + +++EG P+ L ++ +I L + G + DA +
Sbjct: 348 MGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETI 407
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
+ E PDT Y ++I + D D ++ + M+ CEPN TY+ LI+GL
Sbjct: 408 MKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCD 467
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
S +V +A ++ EM+ GI+P+ T T + LC G A ++ + GC+ ++
Sbjct: 468 SGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYT 527
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESG-YP----------------------------- 474
Y L+ L G + + L+H M G +P
Sbjct: 528 YTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMG 587
Query: 475 -----SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
++ Y +I G C +G + A+LVM L++G + + Y+ + S
Sbjct: 588 RNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTT 647
Query: 530 SAYNLF 535
SA +
Sbjct: 648 SALRIL 653
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 136/310 (43%), Gaps = 45/310 (14%)
Query: 104 GVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDV 163
G+F + +I+ N + L+L++ K++ +G L PN+
Sbjct: 765 GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL---------------PNLL--- 806
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
+Y+ +++ALG+ + N+ +++ + G+ PD T +++++I +G+V A LGR
Sbjct: 807 -TYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 865
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF---NVMTYNIVISGWSKL 280
+ G + LW L +K + L + V+ S
Sbjct: 866 MIKAGCQ-------PTLW---------TYGVLIKGLKNEYLLADQRLAALPDVVPNCSFG 909
Query: 281 GQVVEME--RVLKEIVAE---GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
Q + + V+ +AE G S + L+ L AGR +A E+ +M +G P
Sbjct: 910 YQTTDQDAVSVMSAKLAELDPGLSVQ--VQNALVSNLSTAGRWFEANELLGSMISQGLCP 967
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D AYN+++ + + V + D M +K MS+ CE +++ Y LI L + + +A F
Sbjct: 968 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 1027
Query: 396 EEMLDRGIVP 405
E ML R P
Sbjct: 1028 ENMLMRTWNP 1037
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%)
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
D + + G AY+A++ + +G M Y M S +PN+ Y +I+ L K
Sbjct: 338 LDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCK 397
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
VADA + +++ + + P T T TS + C +A+ ++ + K GC+ +
Sbjct: 398 DGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVT 457
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y L+ L G+ DL EM G I LC++G E+A + +
Sbjct: 458 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 517
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
KG P+ Y+ L + L S L+ A LF ++
Sbjct: 518 NKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 551
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 127/310 (40%), Gaps = 25/310 (8%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y ++ + + D ++L M + G P+++T ++++ + A ++ +
Sbjct: 702 TYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 761
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQV 283
+ G+ + + ++ LC+ A +FN M + L N++TY+ +I + G+V
Sbjct: 762 IEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKV 821
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E E + E+ G PD +T+ +IE +G+++ A M + GC P Y +
Sbjct: 822 EEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVL 881
Query: 344 I----SNYI--------------------SVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
I + Y+ D D ++ + ++ L+
Sbjct: 882 IKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALV 941
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
S L + + +A E+ M+ +G+ P S L L AM ++K GC+
Sbjct: 942 SNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCE 1001
Query: 440 LSLTAYKLLL 449
+ L YK L+
Sbjct: 1002 VHLNGYKELI 1011
>gi|125537564|gb|EAY84052.1| hypothetical protein OsI_39281 [Oryza sativa Indica Group]
Length = 762
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 129/253 (50%), Gaps = 2/253 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +YN I+ A GR + V +M K G PD T ++D + G + A+ +
Sbjct: 401 VVTYNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYT 460
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLG 281
R+++ GL D + + ++ CL + H+ AA LF M + N++TYNI+I+ +K
Sbjct: 461 RMQEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKAR 520
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ ++ K++ GF PD +T+S ++E LG G +D+A VF M+ PD Y
Sbjct: 521 NYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHD-WAPDEPVYG 579
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++ + G+ D+ + +Y M +PN+ T L+S LK + DA V + ML +
Sbjct: 580 LLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQ 639
Query: 402 GIVPSTGTITSFL 414
G+VPS T T L
Sbjct: 640 GLVPSLQTYTLLL 652
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 144/330 (43%), Gaps = 11/330 (3%)
Query: 198 LETLSIVMDSFIRAGQVYKAIQ----MLGRLE----DFGLKFDAESLNVVLWCLCQRLHV 249
L+ L +D+F +A QV K + LG + G K D S ++ L Q
Sbjct: 324 LDNLHCKIDAF-QANQVLKLLHDHTIALGFFQWLKRQPGFKHDGHSYTTMIGILGQARQF 382
Query: 250 GAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
G L + M V+TYN +I + + + E +V +E+ G+ PD +T+ L
Sbjct: 383 GTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTL 442
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I+ + G ++ A++++ M+E G PDT Y+A+++ G K + M C
Sbjct: 443 IDIHAKGGYLEVAMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGC 502
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
PN+ TY +I+ K+R + ++++++M G P T + +E L G A
Sbjct: 503 TPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEA 562
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++ + R Y LL+ G L +H M + G + +++
Sbjct: 563 VFIEMRHDWAP-DEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFL 621
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
I + ++A V++ L +G PS Y+ L
Sbjct: 622 KINRFQDAYSVLQNMLAQGLVPSLQTYTLL 651
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%)
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
++ G D ++Y +I F K M+S +C+P + TY R+I ++ +
Sbjct: 358 RQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYL 417
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A++VFEEM G P T + ++ G AM +Y + ++VG Y +
Sbjct: 418 REAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVGLSPDTFTYSAM 477
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ L G L+ EM E+G + Y +IA EN V + ++ GF
Sbjct: 478 VNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGF 537
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P ++ YS + L L+ A +F +++
Sbjct: 538 RPDKITYSIVMEVLGHCGHLDEAEAVFIEMR 568
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 81/187 (43%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
++ D +Y+ +V LG+ + +M + G P+L T +I++ +A +
Sbjct: 467 LSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVV 526
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
++ ++ G + D + ++V+ L H+ A ++F M+ + Y +++ W
Sbjct: 527 KLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHDWAPDEPVYGLLVDLWG 586
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K G V + ++ +G P+ T + L+ + R DA V M +G P
Sbjct: 587 KAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQ 646
Query: 339 AYNAVIS 345
Y ++S
Sbjct: 647 TYTLLLS 653
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 174/375 (46%), Gaps = 1/375 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y+ +++ + D + +M G P L T + +M + G+V A ++L +
Sbjct: 262 TYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVM 321
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQV 283
+ L D S N +++ + ++G A LF ++ + L +V+TYN +I G ++G +
Sbjct: 322 VNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDL 381
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
R+ E++ G PD TF+ L+ G + G + A E+FD M +G PD AY
Sbjct: 382 DVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITR 441
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I + +GD + + M + P++ TY I GL K + +A E+ ++ML G+
Sbjct: 442 IVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGL 501
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
VP T TS + G A ++ + G S+ Y +L+ + G+ + +
Sbjct: 502 VPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAIL 561
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ EM E G + Y +I GLC + +++ A E KG P++ Y+ L N+
Sbjct: 562 HFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENC 621
Query: 524 ASNKLESAYNLFRKI 538
+ A L++ +
Sbjct: 622 NLGHWQEALRLYKDM 636
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 169/378 (44%), Gaps = 35/378 (9%)
Query: 162 DVKSYNVIVKAL-GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
D+K+ N +++ L R D V + M + G+ P + T + ++DSF + G+V +A+Q+
Sbjct: 153 DLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQL 212
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKL 280
L +++ G CL N +TYN++++G S
Sbjct: 213 LLQMQKMG-------------CLP---------------------NDVTYNVLVNGLSHS 238
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ + + +++E++ G + T+ LI G G++D+A + + M +G P Y
Sbjct: 239 GELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTY 298
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N ++ G + K M + N P++ +Y LI G + + +A +F E+
Sbjct: 299 NTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRF 358
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
RG+VPS T + ++ LC G AM + + K G + + +L+R G M
Sbjct: 359 RGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPM 418
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+L+ EM G D Y I G +G A + EE L +GF P + Y+ +
Sbjct: 419 AKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFID 478
Query: 521 KLLASNKLESAYNLFRKI 538
L L+ A L +K+
Sbjct: 479 GLHKLGNLKEASELVKKM 496
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 178/417 (42%), Gaps = 36/417 (8%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ V +YN ++ + ++ +L M K G P+ T +++++ +G++ +A
Sbjct: 186 IRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAK 245
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+++ + GL+ A + + ++ C++ + AS L M + + ++TYN ++ G
Sbjct: 246 ELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGL 305
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G+V + ++L +V + PD ++++ LI G R G I +A +F ++ +G P
Sbjct: 306 CKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSV 365
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN +I +GD D M+ M + +P++ T+T L+ G K + A E+F+E
Sbjct: 366 VTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDE 425
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
ML+RG+ P + + G P A M ++ G L Y + + L G
Sbjct: 426 MLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGN 485
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS- 516
+L +M +G D Y +I G L A V E L KG PS + Y+
Sbjct: 486 LKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTV 545
Query: 517 ----------------------------------KLSNKLLASNKLESAYNLFRKIK 539
L N L K++ AY F +++
Sbjct: 546 LIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQ 602
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 90/223 (40%), Gaps = 1/223 (0%)
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISV-GDFDECMKYYKGMSSYNCEPNMDTYT 376
++ + VF M KG PD N V+ D + Y M P + TY
Sbjct: 135 LEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYN 194
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
++ K KV +AL++ +M G +P+ T + L G A + ++ ++
Sbjct: 195 TMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRL 254
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G ++S Y L+R G+ L EM G Y ++ GLC G++ +A
Sbjct: 255 GLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDA 314
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+++ + K P + Y+ L + A+ LF +++
Sbjct: 315 RKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELR 357
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
V +M +G+ P + T ++++ S+ G++ AI + + G+ + + N ++ LC
Sbjct: 527 VFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLC 586
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ + A F M+ K + N TY I+I+ LG E R+ K+++ PDS
Sbjct: 587 KVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSC 646
Query: 304 TFSFLIEGLGR 314
T S L++ L +
Sbjct: 647 THSALLKHLNK 657
>gi|302801478|ref|XP_002982495.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
gi|300149594|gb|EFJ16248.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
Length = 448
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 180/418 (43%), Gaps = 38/418 (9%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
V D SYN++V+ L + D +LS M EG +PD+ T +++D F +V +
Sbjct: 5 GVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEV 64
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCL-CQRLHVGAASSLFNSMKGKVLFNVMTYNIVISG 276
++ LE G+ + N +L L C G ++ L +V+ Y ++
Sbjct: 65 CELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDC 124
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K G+ E V+ E++ + PD +T++ LI L + R DDA++VFD M EK P+
Sbjct: 125 LIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPN 183
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+ Y ++++ + D + + M P+ TY L+ L + A ++
Sbjct: 184 LDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHS 243
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK-----------------------KA 433
M RG VP T S + C G A +++K +A
Sbjct: 244 SMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIEGLCRA 303
Query: 434 RKV-------------GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
KV GC +L Y L+ + L L+ M+E G+ + IY
Sbjct: 304 SKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNTMIY 363
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
I GLC +G++ A ++S+ +G P + Y+ L L +N+++ A+ L+R++
Sbjct: 364 STFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREM 421
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 153/350 (43%), Gaps = 3/350 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M ++GV PD ++ ++++ + V +A ML + G D + +++ C+
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
VG LF ++ V ++ YN ++ G + V +G P L +
Sbjct: 61 VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
+++ L + G+ +A EV M +K PD Y A+IS D+ MK + M
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKE 179
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
PN+D YT L++ ++RK+ A +F EM+ RG PS T L LC+ G + A
Sbjct: 180 IVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAY 239
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP-SDGEIYEYVIAG 486
++ R G Y L+ G+ L+ E+ E D IY +I G
Sbjct: 240 DIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIEG 299
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
LC ++E A+ V + KG P+ Y+ L +N+++ A LFR
Sbjct: 300 LCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFR 349
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 160/372 (43%), Gaps = 42/372 (11%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA-KEGVNPDLETL 201
GE LF ++ VA + +YN I+KAL FD SD+A +G P +
Sbjct: 62 GEVCELF--QELESNGVAVGMLAYNAILKALMCSGDFDGGFK-FSDIAVGDGSLPHVLAY 118
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
++D I+ G+ +A +++G + + D + ++ LC+ A +F+ M
Sbjct: 119 KTMLDCLIKTGKTREASEVVGEMIKKSVP-DGMTYTALISVLCKHNRADDAMKVFDIMVE 177
Query: 262 K-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
K ++ N+ Y +++ + ++ R+ E++ G+ P + T+ L+ L GR
Sbjct: 178 KEIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYL 237
Query: 321 AIEVFDTMKEKGCGPDTNAY------------------------------------NAVI 344
A ++ +M+ +G PD N Y N +I
Sbjct: 238 AYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLI 297
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+E ++ GM C P + TY LI G K+ +V AL++F M ++G
Sbjct: 298 EGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFS 357
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P+T ++F++ LC G + A ++++ + GC Y L+R L G + L
Sbjct: 358 PNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRL 417
Query: 465 WHEMQESGYPSD 476
+ EM E GY +D
Sbjct: 418 YREMGERGYIAD 429
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 126/272 (46%), Gaps = 4/272 (1%)
Query: 135 VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
V+ + N + +AM +F K + ++ Y ++ A R + D + +M + G
Sbjct: 158 VLCKHNRADDAMKVFDIMVEKE--IVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGY 215
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
P T +++ G+ Y A + + G D + +++ C + A
Sbjct: 216 GPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKV 275
Query: 255 LFNS-MKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
LF ++G K L + YN++I G + +V E V +V +G P T++ LI G
Sbjct: 276 LFKEVLEGEKALLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGF 335
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
+A +D A+++F M+EKG P+T Y+ I VG +E ++++ C P+
Sbjct: 336 FKANEVDKALQLFRVMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDN 395
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
TY LI GL + ++ +A ++ EM +RG +
Sbjct: 396 VTYNALIRGLFGANRMDEAHRLYREMGERGYI 427
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 184/380 (48%), Gaps = 8/380 (2%)
Query: 168 VIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDF 227
VI+ LG+ F ++L D+ +GV+ D+ + ++ ++ G+ +A+ + +LE+
Sbjct: 190 VIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEE 249
Query: 228 GLKFDAESLNVVLWCLCQR-LHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVE 285
G + + NV+L + + + L +SMK V ++ TYN +IS + E
Sbjct: 250 GCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEE 309
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
V +E+ A GFSPD +T++ L++ G++ R +A+EV M+ G P YN++IS
Sbjct: 310 AAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLIS 369
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
Y G DE M+ M +P++ TYT L+SG K+ K A++VFEEM G P
Sbjct: 370 AYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQP 429
Query: 406 STGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM---LL 462
+ T + ++ + G M ++++ + C + + L L+ FG+ GM +
Sbjct: 430 NICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTL---LAVFGQNGMDSEVS 486
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
++ EM+ +G+ + + + +I+ G + A+ + L G P Y+ + L
Sbjct: 487 GVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAAL 546
Query: 523 LASNKLESAYNLFRKIKIAR 542
E + + ++K R
Sbjct: 547 ARGGLWEQSEKVLAEMKDGR 566
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 185/406 (45%), Gaps = 18/406 (4%)
Query: 120 LWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFF 179
L N V + + V+GK G S A +L +++ V D+ +Y ++ A +
Sbjct: 183 LSNSVVAVIISVLGK---EGRASFAASLLH---DLRNDGVHIDIYAYTSLITAYASNGRY 236
Query: 180 DFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQ-MLGRLEDFGLKFDAESLNV 238
V + +EG P L T +++++ + + G + I ++ ++ G+ D + N
Sbjct: 237 REAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNT 296
Query: 239 VLWCLCQRLHV-GAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAE 296
++ C+R + A+ +F MK + +TYN ++ + K + E VLKE+ A
Sbjct: 297 LISS-CRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEAS 355
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
GF+P +T++ LI R G +D+A+E+ M +KG PD Y ++S + G D
Sbjct: 356 GFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYA 415
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
MK ++ M C+PN+ T+ LI + ++VFEE+ VP T + L
Sbjct: 416 MKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAV 475
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGY 473
G ++K+ ++ G + L +S + +CG + ++ M ++G
Sbjct: 476 FGQNGMDSEVSGVFKEMKRAGFVPERDTFNTL---ISAYSRCGFFDQAMAIYRRMLDAGV 532
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC-PSRLVYSKL 518
D Y V+A L G E + V+ E ++ G C P+ L Y L
Sbjct: 533 TPDLSTYNAVLAALARGGLWEQSEKVLAE-MKDGRCKPNELTYCSL 577
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 187/462 (40%), Gaps = 49/462 (10%)
Query: 107 LQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSY 166
+++K G D V + LDV GK EAM + ++ A + +Y
Sbjct: 314 FEEMKAAGFSPD---KVTYNALLDVYGK----SRRPREAMEVL--KEMEASGFAPSIVTY 364
Query: 167 NVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLED 226
N ++ A R D + S M K+G+ PD+ T + ++ F + G+ A+++ +
Sbjct: 365 NSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRV 424
Query: 227 FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVE 285
G + + + N ++ R + +F +K + + +++T+N +++ + + G E
Sbjct: 425 AGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSE 484
Query: 286 MERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVIS 345
+ V KE+ GF P+ TF+ LI R G D A+ ++ M + G PD + YNAV++
Sbjct: 485 VSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLA 544
Query: 346 NYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVP 405
G +++ K M C+PN TY L+ ++V + EE+ I P
Sbjct: 545 ALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEP 604
Query: 406 S-----------------TGTITSFLEPLCSYGPP-----HAAMMMYKKARKV------- 436
T T +FLE P +A + +Y + R V
Sbjct: 605 QAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEIL 664
Query: 437 ------GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
G SLT Y L+ S D+ E+ G D + VI C
Sbjct: 665 NFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRN 724
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
G+++ A + E G P + Y N +AS +S +
Sbjct: 725 GRMKEASRIFAEMKDFGLAPDVITY----NTFIASYASDSMF 762
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 130/297 (43%), Gaps = 1/297 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K + ++N ++ A R FFD + M GV PDL T + V+ + R G
Sbjct: 492 MKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGL 551
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
++ ++L ++D K + + +L V S+L + G + +
Sbjct: 552 WEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKT 611
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
++ +SK + E ER E+ +GFSPD T + ++ GR + E+ + +K+ G
Sbjct: 612 LVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSG 671
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P YN+++ Y F++ + + + +P++ ++ +I ++ ++ +A
Sbjct: 672 FTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEAS 731
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
+F EM D G+ P T +F+ S A+ + K K CK + Y L+
Sbjct: 732 RIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLI 788
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR-------- 210
V D+ +YN ++ AL R ++ VL++M P+ T ++ ++
Sbjct: 532 VTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMS 591
Query: 211 --AGQVYKAI-------------------------QMLGRLEDFGLKFDAESLNVVLWCL 243
A ++Y I + L + G D +LN ++
Sbjct: 592 ALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIY 651
Query: 244 CQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
+R V + + N +K ++ TYN ++ +S+ + E +L+EI+A+G PD
Sbjct: 652 GRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDI 711
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
++F+ +I R GR+ +A +F MK+ G PD YN I++Y S F E + K
Sbjct: 712 ISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKY 771
Query: 363 MSSYNCEPNMDTYTRLISGLLK 384
M C+PN +TY LI K
Sbjct: 772 MIKNECKPNQNTYNSLIDWFCK 793
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 94/198 (47%), Gaps = 1/198 (0%)
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
++ ++G +PD+ TL+ ++ + R V K ++L ++D G + N +++ +
Sbjct: 631 ELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTE 690
Query: 248 HVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
H + + + K + +++++N VI + + G++ E R+ E+ G +PD +T++
Sbjct: 691 HFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYN 750
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
I +AI+V M + C P+ N YN++I + + DE + + +
Sbjct: 751 TFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEANSFISNLRNL 810
Query: 367 NCEPNMDTYTRLISGLLK 384
+ D RL+ L K
Sbjct: 811 DPSVTKDEERRLLERLNK 828
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 200/447 (44%), Gaps = 23/447 (5%)
Query: 130 DVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDM 189
+V+G + N + F +K V DV +Y +++ + N L +M
Sbjct: 494 EVIGFLCNASRVEN---AFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEM 550
Query: 190 AKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHV 249
++G P + T + ++ ++++A +V A ++ + G + + ++ C+ ++
Sbjct: 551 VRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNI 610
Query: 250 GAASSLFNSMKGKVLF-----------------NVMTYNIVISGWSKLGQVVEMERVLKE 292
A ++ M+G NV+TY ++ G K +V + +L+
Sbjct: 611 EKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLET 670
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+ +G P+++ + LI+G +A ++D+A EVF M E+G P+ Y+++I
Sbjct: 671 MFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKR 730
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
D +K M +C PN+ YT +I GL K K +A ++ M ++G P+ T T+
Sbjct: 731 LDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTA 790
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
++ G + ++++ GC + Y +L+ G L EM+++
Sbjct: 791 MIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTY 850
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
+P Y VI G + ++ ++EE + G P+ L+Y L + + + +LE A
Sbjct: 851 WPKHVSSYCKVIEGYKR--EFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVAL 908
Query: 533 NLFRKIKIARQNDYARR-LWRSKGWHF 558
L +++ A + A++ L+ S + F
Sbjct: 909 ELHKEVISASMSMTAKKNLYTSLIYSF 935
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 209/487 (42%), Gaps = 57/487 (11%)
Query: 91 AVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVV-GKVVNRGNLSGEAMVLF 149
++DEF L G F Q L G +AL + + D V ++ +SG F
Sbjct: 273 SMDEFTL------GFFAQALCKVGKWREALSLIEKE---DFVPNTILYNKMISGLCEASF 323
Query: 150 FNWAIKHPN------VAKDVKSYNVIV------KALGRRKFFDFMCNVLSDMAKEGVNPD 197
F A+ N +V++Y +++ K LGR K +LS M EG P
Sbjct: 324 FEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCK------RILSMMIAEGCYPS 377
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ------RLHVGA 251
+ ++ ++ ++ A ++L ++E K N+++ +C +
Sbjct: 378 YTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFEL 437
Query: 252 ASSLFNSM--KGKVL--FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
A +N M G VL NV+++ + G+ K + +V+ E++ GF PD+ T+S
Sbjct: 438 AEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAY---KVIHEMMGNGFVPDTSTYSE 494
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
+I L A R+++A +F MK G PD Y +I + G + + M
Sbjct: 495 VIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDG 554
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
CEP + TYT LI LK++KV+ A E+FE M+ +G P+ T T+ ++ C G A
Sbjct: 555 CEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKAC 614
Query: 428 MMYKKAR----------------KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
+Y + R V K ++ Y L+ L K DL M
Sbjct: 615 QIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVD 674
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G + +Y+ +I G C +L+ A V + + +G+ P+ YS L ++L +L+
Sbjct: 675 GCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLV 734
Query: 532 YNLFRKI 538
+ K+
Sbjct: 735 LKVLSKM 741
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 143/376 (38%), Gaps = 43/376 (11%)
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
K NV+++ R ++ L + G P T + ++ F+RA ++ A +
Sbjct: 207 KLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHRE 266
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQV 283
+ + GL D +L LC+ A SL K + N + YN +ISG +
Sbjct: 267 MSELGLSMDEFTLGFFAQALCKVGKWREALSLIE--KEDFVPNTILYNKMISGLCEASFF 324
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E L + + P+ T+ L+ G ++ + M +GC P +N++
Sbjct: 325 EEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSL 384
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD------ALEVFEE 397
+ Y DF K K M C+P Y LI + ++ A + + E
Sbjct: 385 VHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNE 444
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
ML G V + + SF LC +G ++KA KV
Sbjct: 445 MLSAGTVLNKVNVVSFARCLCGFGK-------FEKAYKV--------------------- 476
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
HEM +G+ D Y VI LCN ++ENA + +E G P Y+
Sbjct: 477 -------IHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTI 529
Query: 518 LSNKLLASNKLESAYN 533
L + + ++ A+N
Sbjct: 530 LIDCFSKAGIIKQAHN 545
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 163/385 (42%), Gaps = 16/385 (4%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN +V+ R D V +M++ G++ D TL + + G+ +A+ ++ +
Sbjct: 243 TYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEK- 301
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
EDF + N ++ LC+ A N M+ + NV TY I++ G Q+
Sbjct: 302 EDFVP--NTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQL 359
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+R+L ++AEG P F+ L+ ++ A ++ M++ C P YN +
Sbjct: 360 GRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNIL 419
Query: 344 ISNYISVGD------FDECMKYYKGMSSYNC---EPNMDTYTRLISGLLKSRKVADALEV 394
I + S G+ F+ K Y M S + N+ ++ R + G K K A +V
Sbjct: 420 IGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEK---AYKV 476
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
EM+ G VP T T + + LC+ A ++K+ + G + Y +L+ S
Sbjct: 477 IHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSK 536
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
G + EM G Y +I ++ A + E + KG P+ +
Sbjct: 537 AGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVIT 596
Query: 515 YSKLSNKLLASNKLESAYNLFRKIK 539
Y+ L + S +E A ++ +++
Sbjct: 597 YTALIDGYCKSGNIEKACQIYARMR 621
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 141/321 (43%), Gaps = 29/321 (9%)
Query: 102 LRGVFLQKLKGKGVIEDALWN-----VNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKH 156
L +F+ + ++ DAL + +D + +V K+V RG +
Sbjct: 668 LETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERG---------------YN 712
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV +Y+ ++ L + K D + VLS M + P++ + ++D + + +
Sbjct: 713 PNVY----TYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDE 768
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVIS 275
A +++ +E+ G K + + ++ + V LF M K N +TY ++I+
Sbjct: 769 AYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLIN 828
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G + E +L+E+ + ++ +IEG R + ++ + + +++ G P
Sbjct: 829 HCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFIL--SLGLLEEVEKNGSAP 886
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGM--SSYNCEPNMDTYTRLISGLLKSRKVADALE 393
Y +I N++ G + ++ +K + +S + + YT LI + K+ A E
Sbjct: 887 TILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFE 946
Query: 394 VFEEMLDRGIVPSTGTITSFL 414
+F +M+ G++P GT L
Sbjct: 947 LFYDMIRDGVIPDLGTFVHLL 967
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 97/239 (40%), Gaps = 40/239 (16%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ A ++ Y ++ L + D ++ M ++G P++ T + ++D F +AG+V K
Sbjct: 745 SCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKC 804
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISG 276
+++ + G + + V++ C H+ A +L MK +V +Y VI G
Sbjct: 805 LELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEG 864
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR------------------- 317
+ + + + +L+E+ G +P L + LI+ +AGR
Sbjct: 865 YKR--EFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMT 922
Query: 318 ------------------IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
ID A E+F M G PD + ++ I V ++E ++
Sbjct: 923 AKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQ 981
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 98/259 (37%), Gaps = 18/259 (6%)
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
E L+EI + + LI R G + A+E +K+ G P YNA++
Sbjct: 191 EEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQV 250
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
++ D ++ MS + T L K K +AL + E+ VP+
Sbjct: 251 FLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPN 307
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL---RRLSGFGKCGMLLD 463
T + LC AM + R C ++ Y++LL G+C +L
Sbjct: 308 TILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILS 367
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ + E YPS I+ ++ C A ++++ + P +VY+ L +
Sbjct: 368 MM--IAEGCYPS-YTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSIC 424
Query: 524 ASNKL---------ESAYN 533
+ +L E AYN
Sbjct: 425 SGGELPGPVTFELAEKAYN 443
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 179/388 (46%), Gaps = 14/388 (3%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y V++ L +R + +M + G+ PD++ ++++ S G++ A ++L +
Sbjct: 216 TYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSM 275
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQV 283
++ G D + V L LC+ V A F ++ G ++ Y+ +I G + G+
Sbjct: 276 KENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRF 335
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E E++ + SPD ++ LI AGR DA + D MK+KG PDT YN +
Sbjct: 336 DEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTL 395
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ VG+ D M N + T+ +I GL K + A++VF+EM + G
Sbjct: 396 LKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGC 455
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKAR-----KVGCKLSLTAYKLL----LRRL-S 453
P+ T + ++ L G A M++ K + +L+L A ++ LR+L
Sbjct: 456 HPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVD 515
Query: 454 GFGKCGMLLDLWHEMQ---ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
G + G +L + ++ ESG D Y +I GLC L+ A+ + +E KG P
Sbjct: 516 GMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISP 575
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ Y L + L +++ A LF+ I
Sbjct: 576 DEITYGTLIDGLWRAHRENDATMLFQNI 603
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 156/361 (43%), Gaps = 1/361 (0%)
Query: 182 MCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLW 241
M + L+D G+ ++ + AG+ +A++ R+ DF + A N V
Sbjct: 128 MFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQ 187
Query: 242 CLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
L R + A +L+N M L N TY +++ G K G V+ ++ E++ G P
Sbjct: 188 VLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVP 247
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
D ++ L+ L GRI+DA + +MKE GC PD Y +S G DE +
Sbjct: 248 DVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRF 307
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
+ + + Y+ LI GL ++ + + L + EML + I P T +
Sbjct: 308 ELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEA 367
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
G A ++ + + G Y LL+ L G L EM ++ D +
Sbjct: 368 GRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTH 427
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+I GLC G ++ A+ V +E G P+ + Y+ L + L + LE A LF K+++
Sbjct: 428 NIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEM 487
Query: 541 A 541
Sbjct: 488 G 488
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 165/392 (42%), Gaps = 20/392 (5%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN + + L R + + M G P+ T ++MD + G A++M +
Sbjct: 182 YNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEML 241
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVV 284
+ G+ D + V+L LC + A L SMK + +TY + +SG K G+V
Sbjct: 242 ERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVD 301
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E + + GF+ + +S LI+GL +AGR D+ + + M K PD Y +I
Sbjct: 302 EAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILI 361
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ G + M P+ Y L+ L + A + EML +V
Sbjct: 362 RRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVV 421
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD- 463
+ T + LC G AM ++ + + GC ++ Y L + G + GML +
Sbjct: 422 LDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNAL---IDGLYRAGMLEEA 478
Query: 464 --LWHEMQESGYPS-------------DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L+H+M+ PS D E ++ G+C GQ+ A ++ + G
Sbjct: 479 RMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGV 538
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
P + Y+ L N L + L+ A LF+++++
Sbjct: 539 VPDVVTYNTLINGLCKAKNLDGALRLFKELQL 570
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 190/426 (44%), Gaps = 36/426 (8%)
Query: 86 IDSSRAVDEFL----LPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVG----KVVN 137
+D+ + DE L +P+ ++ V L L +G IEDA + S+ G +V
Sbjct: 231 VDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDA---GRLLCSMKENGCPPDEVTY 287
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKD------VKSYNVIVKALGRRKFFDFMCNVLSDMAK 191
LSG + A + +D + Y+ ++ L + FD + ++M
Sbjct: 288 TVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLG 347
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
+ ++PD+ +I++ F AG+ A +L ++D G D N +L L ++
Sbjct: 348 KSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDR 407
Query: 252 ASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A SL + M + V+ + T+NI+I G K G + + +V E+ G P +T++ LI+
Sbjct: 408 AQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALID 467
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGP--------------DTNAYNAVISNYISVGDFDEC 356
GL RAG +++A +F M E G P DT + ++ G +
Sbjct: 468 GLYRAGMLEEARMLFHKM-EMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKA 526
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
K +G+ P++ TY LI+GL K++ + AL +F+E+ +GI P T + ++
Sbjct: 527 YKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDG 586
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY--- 473
L + A M+++ + G SL Y ++R L K ++LW + Y
Sbjct: 587 LWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLS 646
Query: 474 PSDGEI 479
P D I
Sbjct: 647 PEDEVI 652
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 113/259 (43%), Gaps = 6/259 (2%)
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
V M L + A G S F L+ AGR +A+E F M + C P YNAV
Sbjct: 126 VAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAV 185
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ G + Y M S C PN TY L+ GL K DAL++F+EML+RGI
Sbjct: 186 FQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGI 245
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
VP T L LC+ G A + ++ GC Y + LSG K G + +
Sbjct: 246 VPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVF---LSGLCKAGRVDE 302
Query: 464 LWHE---MQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+H +Q+ G+ Y +I GL G+ + + E L K P +Y+ L
Sbjct: 303 AFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIR 362
Query: 521 KLLASNKLESAYNLFRKIK 539
+ + + + A+ L ++K
Sbjct: 363 RFAEAGRTKDAFLLLDEMK 381
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 142/369 (38%), Gaps = 87/369 (23%)
Query: 154 IKHPNVAKDVKSYNVIVKA-----------------------------------LGRRKF 178
+K D YN ++KA L ++
Sbjct: 380 MKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGL 439
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE-----DFGLKF-- 231
D V +M + G +P + T + ++D RAG + +A + ++E L+
Sbjct: 440 IDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTL 499
Query: 232 ------DAESLNVVLWCLCQRLHVGAASSLFNS-MKGKVLFNVMTYNIVISGWSKLGQVV 284
D ESL ++ +CQ V A L ++ V+ +V+TYN +I+G K +
Sbjct: 500 GANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLD 559
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
R+ KE+ +G SPD +T+ LI+GL RA R +DA +F + G P YN ++
Sbjct: 560 GALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMM 619
Query: 345 SNYISVGDFDECMKYYKGM--SSYNCEP-------------------------------- 370
+ + + + + YN P
Sbjct: 620 RSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANARKCFEDGFLDETVKELIKIDQVYG 679
Query: 371 --NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA-- 426
N + YT + GL + RK+ DAL +F + + GIV + + LC +AA
Sbjct: 680 SLNPNPYTIWVIGLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYLCWDRNLNAAVD 739
Query: 427 MMMYKKARK 435
+MMY +++
Sbjct: 740 IMMYTLSKR 748
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 193/417 (46%), Gaps = 21/417 (5%)
Query: 147 VLFFNWAIKHPNVAKDVKSYNVIVK---ALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+LFF+ ++ P ++D+ V + A R ++L+ + G+ T I
Sbjct: 84 LLFFHALLRLPERSRDLSPCTVDLALDLAARLRHPRQLTSSILALFPRHGLAFTPRTFPI 143
Query: 204 VMDSFIRAGQVYK-AIQMLGRLE-DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+ + F + + AI++ L G+ D N +L L + A+SL +++
Sbjct: 144 LFERFAMSHRRPDLAIRLFLSLHRSHGIAQDLPLFNSLLDALVKSRRASKAASLVRALEQ 203
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
+ + +TYN + GW ++ +L+++V G +P T++ +++G R+G++ A
Sbjct: 204 RFPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKATYNIILKGFFRSGQLQHA 263
Query: 322 IEVFDTMKEKG-----CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
+ F MK +G C PD +Y V+ G D+ K + MS C+P+ TY
Sbjct: 264 WDFFLQMKRRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYN 323
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
LI K + DA+ VF++M+ +G +P+ T T + LC G AM + + +
Sbjct: 324 ALIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSE 383
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ--ESGYPSDGEIYEYVIAGLCNIGQLE 494
GC+ ++ Y +L+R G+ LDL+ M E P+ + Y +I+ + + E
Sbjct: 384 GCEPNVQTYNVLIRYSLEEGEIEKGLDLFETMSKGEECLPNQ-DTYNIIISAMFVRKRAE 442
Query: 495 N---AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYAR 548
+ A ++ E + +G+ P + +++++ N L+ + E + L R Q Y R
Sbjct: 443 DMAVAARMVVEMVDRGYLPRKFMFNRVLNGLMLTGNQELSRELLRM-----QEKYTR 494
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 123/260 (47%), Gaps = 8/260 (3%)
Query: 145 AMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIV 204
A+ LF + H +A+D+ +N ++ AL + + +++ + ++ PD T + +
Sbjct: 158 AIRLFLSLHRSH-GIAQDLPLFNSLLDALVKSRRASKAASLVRAL-EQRFPPDAVTYNTL 215
Query: 205 MDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-- 262
D + R +A+ +L ++ + G+ + N++L + + A F MK +
Sbjct: 216 ADGWCRVKDTSRALDILRQMVESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGS 275
Query: 263 ----VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+V++Y V+ G GQ+ + +V E+ EG P + T++ LI+ + G +
Sbjct: 276 NDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNL 335
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
+DA+ VFD M KG P+ Y +I G MK M S CEPN+ TY L
Sbjct: 336 EDAVAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVL 395
Query: 379 ISGLLKSRKVADALEVFEEM 398
I L+ ++ L++FE M
Sbjct: 396 IRYSLEEGEIEKGLDLFETM 415
>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 595
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 182/428 (42%), Gaps = 45/428 (10%)
Query: 154 IKHPN---VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR 210
IKH + V +V ++N+++ L R F +VL M K GV P + T + +++
Sbjct: 101 IKHMSYIGVKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCV 160
Query: 211 AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMT 269
G V +AI+ + L+D G + D + ++ LC+ H AA S M+ + +V
Sbjct: 161 EGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTA 220
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
YN V+ G K G V E + ++ +G PD T++ LI GL R +A + M
Sbjct: 221 YNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMM 280
Query: 330 EKGCGPDTNAYNAVISNYISVG-----------------------------------DFD 354
KG PD +N + ++ G
Sbjct: 281 RKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMK 340
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ M+ + M C PN+ TYT LI G + + + A+ EM++ G+ P+ T + +
Sbjct: 341 DAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLI 400
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM---LLDLWHEMQES 471
C G P AA ++ K G L ++ L G KC + L+ E+++
Sbjct: 401 GGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAII---LDGLFKCHFHSEAMSLFRELEKM 457
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
D IY ++ G+C+ G+L +A+ + KG + Y+ + N L L+ A
Sbjct: 458 NSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDA 517
Query: 532 YNLFRKIK 539
+L K++
Sbjct: 518 EDLLMKME 525
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 123/287 (42%), Gaps = 1/287 (0%)
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLK 291
+ N++ + + H A SL M V NV T+NIVI+ +L V VL
Sbjct: 78 VKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFGFSVLG 137
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
+ G P +TF+ ++ GL G + AI D +K+ G D A+I+ VG
Sbjct: 138 LMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVG 197
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
+ Y K M NC ++ Y ++ GL K V +A ++F +M +GI P T
Sbjct: 198 HSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYN 257
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
+ LC++ A + + G + + ++ R G ++ M
Sbjct: 258 CLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHM 317
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
G D Y +I C + Q+++A+ V + +RKG P+ + Y+ L
Sbjct: 318 GIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSL 364
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 101/211 (47%), Gaps = 2/211 (0%)
Query: 186 LSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
L +M G++P++ T + ++ F +AG+ A ++ + G D ++ ++L L +
Sbjct: 381 LGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFK 440
Query: 246 RLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
A SLF + K +++ Y+I+++G G++ + + + ++G D +T
Sbjct: 441 CHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVT 500
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
++ +I GL + G +DDA ++ M+E GC PD YN + + + + KY M
Sbjct: 501 YNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMK 560
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
N T T+L+ + K A +VF
Sbjct: 561 GKGFRANATT-TKLLINYFSANKENRAFQVF 590
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 91/237 (38%), Gaps = 10/237 (4%)
Query: 308 LIEGLGRAGRIDDAIEVFD---TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
++ L +D A++ + TMK C D N +++ + + + K MS
Sbjct: 49 FLDSLRNVKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVA---KMKHYTTAISLIKHMS 105
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
+PN+ T+ +I+ L + V M G+ PS T T+ + LC G
Sbjct: 106 YIGVKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVA 165
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A+ + +G + ++ L G L +M+E D Y V+
Sbjct: 166 QAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVV 225
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA----YNLFRK 537
GLC G + A + + KG P Y+ L + L ++ + A N+ RK
Sbjct: 226 DGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRK 282
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 162/356 (45%), Gaps = 3/356 (0%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
G P++ T +++M+ + G+V A + + GL+ A S N ++ C+ ++
Sbjct: 227 GYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEG 286
Query: 253 SSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
L M+ +V +V TY+ +I G K Q+ + + KE+ G P+ +TF+ LI G
Sbjct: 287 FRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLING 346
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
+ GR+D A+E++ M KG D YN +I G F E K+ M+ P+
Sbjct: 347 QCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPD 406
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
TYT L+ G K + ALE+ +EM+ GI T+ + LC G A +
Sbjct: 407 KFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLR 466
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ + G K Y +++ G M L EMQ G+ Y ++ GLC G
Sbjct: 467 EMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQG 526
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYA 547
Q++NA +++ L G P + Y+ L KL N+ K ++ +DYA
Sbjct: 527 QVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNV--KTEMGLVSDYA 580
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 112/247 (45%), Gaps = 35/247 (14%)
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
EI+ G+ P+ TF+ L+ L + G++ DA +FD +++ G P ++N +I+ Y G
Sbjct: 222 EILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSG 281
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
+ +E + M + P++ TY+ LI GL K ++ DA +F+EM DRG+VP+ T T
Sbjct: 282 NLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFT 341
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
+ + C G + + L+++ +M
Sbjct: 342 TLINGQCKNG-----------------------------------RVDLALEIYQQMFTK 366
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G +D +Y +I GLC G A + E ++G P + Y+ L + LE A
Sbjct: 367 GLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELA 426
Query: 532 YNLFRKI 538
+ +++
Sbjct: 427 LEMRKEM 433
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 147/326 (45%), Gaps = 29/326 (8%)
Query: 32 SNLSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRA 91
+ +S+N L++ K+ +L+E LK + + F++ FP+V+ S +
Sbjct: 266 TAVSFNTLINGYCKS-GNLEEGFRLKMVMEEFRV-----FPDVFTYSALIDGLCKECQLE 319
Query: 92 VDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFN 151
L E RG+ + +I N VDL+L++ ++ +G
Sbjct: 320 DANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKG------------ 367
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
+ D+ YN ++ L + +F + +M K G+ PD T + ++D +
Sbjct: 368 -------LKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKE 420
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH-VGAASSLFNSMKGKVLFNVMTY 270
G + A++M + G++ D + ++ LC+ V A +L ++ + + TY
Sbjct: 421 GDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTY 480
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
+V+ G+ K G V ++LKE+ ++G P +T++ L+ GL + G++ +A + + M
Sbjct: 481 TMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLN 540
Query: 331 KGCGPDTNAYNAVISNYI---SVGDF 353
G PD YN ++ + +GDF
Sbjct: 541 LGVVPDDITYNILLQGHCKHGKLGDF 566
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 103 RGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKD 162
RG+ K +++ + +++L+L++ ++V G I+ NVA
Sbjct: 401 RGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEG--------------IQLDNVA-- 444
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ I+ L R L +M + G+ PD T ++VMD F + G V ++L
Sbjct: 445 ---FTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLK 501
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLG 281
++ G + NV++ LC++ V A L N+M V+ + +TYNI++ G K G
Sbjct: 502 EMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHG 561
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
++ + + V E+ G D ++ L+ L +A +
Sbjct: 562 KLGDFQNVKTEM---GLVSDYASYRSLLHELSKASK 594
>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 472
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 173/374 (46%), Gaps = 5/374 (1%)
Query: 169 IVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG 228
IV AL R D V M+ D T S +M G++ +A+ +L ++ G
Sbjct: 6 IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65
Query: 229 LKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISGWSKLGQVVEM 286
+ + NV++ LC++ + AS L ++M KG V N +TYN ++ G G++ +
Sbjct: 66 TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVP-NEVTYNSLVHGLCLKGKLDKA 124
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISN 346
+L +VA P+ +TF L++G + GR D + V +++EKG + +Y+++IS
Sbjct: 125 MSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISG 184
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
G + M+ +K M C+PN Y+ LI GL + K +A E EM ++G P+
Sbjct: 185 LFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPN 244
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
+ T +S + G H A++++K+ C Y +L+ L GK L +W
Sbjct: 245 SFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWK 304
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL--RKGFCPSRLVYSKLSNKLLA 524
+M G D Y +I G CN +E + + + L P + Y+ L N
Sbjct: 305 QMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCT 364
Query: 525 SNKLESAYNLFRKI 538
N + A ++ +
Sbjct: 365 KNSVSRAIDILNTM 378
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 141/314 (44%), Gaps = 36/314 (11%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN +V L + D ++L+ M P+ T ++D F++ G+ +++L L
Sbjct: 107 TYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSL 166
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVV 284
E+ G + N +Y+ +ISG K G+
Sbjct: 167 EEKGYR----------------------------------GNEFSYSSLISGLFKEGKGE 192
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
++ KE+V +G P+++ +S LI+GL R G+ D+A E MK KG P++ Y++++
Sbjct: 193 HGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLM 252
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
Y GD + + +K M+ +C + Y+ LI+GL K+ K+ +AL V+++ML RGI
Sbjct: 253 WGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIK 312
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS--LTAYKLLLRRLSGFGKCGMLL 462
+S + C+ M ++ + KL + Y +LL +
Sbjct: 313 LDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAI 372
Query: 463 DLWHEMQESGYPSD 476
D+ + M + G D
Sbjct: 373 DILNTMLDQGCDPD 386
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 107/235 (45%), Gaps = 6/235 (2%)
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
++ L R G +D A+EVF M ++ C D Y+ ++ + G DE + M
Sbjct: 6 IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
PN + LIS L K ++ A ++ + M +G VP+ T S + LC G AM
Sbjct: 66 TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 125
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVI 484
+ + C + + L+ GF K G LD + ++E GY + Y +I
Sbjct: 126 SLLNRMVANKCVPNDITFGTLV---DGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLI 182
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+GL G+ E+ + + +E + KG P+ +VYS L + L K + A ++K
Sbjct: 183 SGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMK 237
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 111/259 (42%), Gaps = 23/259 (8%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
Y+ ++ L R D L +M +G P+ T S +M + AG ++KAI + +
Sbjct: 213 YSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMT 272
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
D ++++ LC+ + A ++ M + + +V+ Y+ +I G+ V
Sbjct: 273 DNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVE 332
Query: 285 EMERVLKEIVAEG--FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+ ++ +++ PD +T++ L+ + AI++ +TM ++GC P
Sbjct: 333 QGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDP------- 385
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDT---YTRLISGLLKSRKVADALEVFEEML 399
DF C + K + N +P D L+ L+K ++ A + E ML
Sbjct: 386 ---------DFITCDIFLKTLRD-NMDPPQDGREFLDELVVRLIKRQRTVGASNIIEVML 435
Query: 400 DRGIVPSTGTITSFLEPLC 418
+ ++P T ++ LC
Sbjct: 436 QKFLLPKPSTWALAVQQLC 454
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 170/370 (45%), Gaps = 1/370 (0%)
Query: 170 VKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGL 229
++A + + FD VL +M + G + T ++++ R+G V +A +ED+GL
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288
Query: 230 KFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMER 288
D + ++ LC+ A +L + M ++ NV+ Y +I G+ + G E +
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 348
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
++KE+VA G P+ +T+ L+ GL + G++D A + M PDT YN +I +
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 408
Query: 349 SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTG 408
+ + M + PN+ TY+ +I GL +S + A ++ EEM +G+ P+
Sbjct: 409 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 468
Query: 409 TITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEM 468
+ C G A ++ K KV L Y L+ LS G+ + +M
Sbjct: 469 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 528
Query: 469 QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
QE G + Y +I G G LE+A +++ L G P+ ++Y L S+ +
Sbjct: 529 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 588
Query: 529 ESAYNLFRKI 538
E + F+ +
Sbjct: 589 EKVSSTFKSM 598
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 170/378 (44%), Gaps = 1/378 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V Y ++ R D ++ +M GV P+ T ++ + GQ+ +A +L
Sbjct: 326 NVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLL 385
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
++ + D + N+++ + A L + M+ + NV TY+I+I G +
Sbjct: 386 KQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQS 445
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ + +L+E+ +G P++ ++ LI G R G + A E+FD M + PD Y
Sbjct: 446 GEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCY 505
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N++I VG +E KY+ M PN TY+ LI G LK+ + A ++ + MLD
Sbjct: 506 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 565
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ P+ LE +K G L Y +L+ LS G
Sbjct: 566 TGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEA 625
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ ++++G D +Y +I+GLC E A +++E +KG P+ + Y+ L +
Sbjct: 626 AFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALID 685
Query: 521 KLLASNKLESAYNLFRKI 538
L S + A N+F I
Sbjct: 686 GLCKSGDISYARNVFNSI 703
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 167/378 (44%), Gaps = 1/378 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN+I++ R +LS+M G++P++ T SI++ ++G+ KA +L
Sbjct: 396 DTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLL 455
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ GLK +A ++ C+ +V A +F+ M K VL ++ YN +I G SK+
Sbjct: 456 EEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 515
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+V E + ++ G P+ T+S LI G + G ++ A ++ M + G P+ Y
Sbjct: 516 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 575
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++ +Y D ++ +K M + Y LI L S + A V +
Sbjct: 576 IDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEK 635
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G VP +S + LC A + + K G ++ Y L+ L G
Sbjct: 636 NGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISY 695
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
++++ + G + Y +I G C +G + NA + E L G P VYS L+
Sbjct: 696 ARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTT 755
Query: 521 KLLASNKLESAYNLFRKI 538
++ LE A L ++
Sbjct: 756 GCSSAGDLEQAMFLIEEM 773
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 185/432 (42%), Gaps = 37/432 (8%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+++ ++ +V +Y++++ L + + ++L +M +G+ P+ + ++ + R G
Sbjct: 423 MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGN 482
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
V A ++ ++ + D N +++ L + V ++ F M+ + +L N TY+
Sbjct: 483 VSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSG 542
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSP-------------------------------- 300
+I G+ K G + E++++ ++ G P
Sbjct: 543 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 602
Query: 301 ---DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
D+ + LI L +G ++ A V +++ G PD + Y+++IS D ++
Sbjct: 603 VMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAF 662
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
MS +PN+ Y LI GL KS ++ A VF +L +G+VP+ T TS ++
Sbjct: 663 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 722
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
C G A +Y + G Y +L S G + L EM G+ S
Sbjct: 723 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS 782
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
+ ++ G C G+++ + ++ + +G P+ L + + L + KL + +F +
Sbjct: 783 S-FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVE 841
Query: 538 IKIARQNDYARR 549
++ AR
Sbjct: 842 LQQKTSESAARH 853
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 149/357 (41%), Gaps = 19/357 (5%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D + Y +++ L + VLS + K G PD+ S ++ + KA
Sbjct: 603 VMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAF 662
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+L + G+ + N ++ LC+ + A ++FNS+ K L N +TY +I G
Sbjct: 663 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 722
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K+G + + E++A G +PD+ +S L G AG ++ A+ + + M +G
Sbjct: 723 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SI 781
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+++N ++ + G E +K + PN T +ISGL ++ K+++ +F E
Sbjct: 782 SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVE 841
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ + + +S + + G K+ L ++R G
Sbjct: 842 LQQKTSESAARHFSSLFMDMINQG-----------------KIPLDVVDDMIRDHCKEGN 884
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
L L + P Y ++ LC G+L A+ +++E ++G LV
Sbjct: 885 LDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLV 941
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 48/246 (19%)
Query: 309 IEGLGRAGRIDDAIEV------FDT-------MKEKGCGPDTNAYNAVISNYISVGDFDE 355
+EG GR A+E FDT M+E+GCG +T YN +I+ G +E
Sbjct: 216 VEGSAARGRHGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 275
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+ K M Y P+ TY LI+GL KSR+ +A + +EM + P+ + ++
Sbjct: 276 AFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLID 335
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
G A M K EM +G
Sbjct: 336 GFMREGNADEAFKMIK-----------------------------------EMVAAGVQP 360
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ Y+ ++ GLC +GQ++ A L++++ +R P + Y+ + + + A+ L
Sbjct: 361 NKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLL 420
Query: 536 RKIKIA 541
+++ A
Sbjct: 421 SEMENA 426
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 174/371 (46%), Gaps = 7/371 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y ++ LG++ + + ++ +M K G +P+++ + V+D+ + +A+ +L ++
Sbjct: 1219 TYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQM 1278
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASS-LFNSMKGKVLFNVMTYNIVISGWSKLGQV 283
G D + N ++ LC HV A L +++ ++ N ++Y +I G+ G++
Sbjct: 1279 FASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGEL 1338
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ +L E++ G +PD +TF LI GL AG++ +A+ V + M E+ PD N YN +
Sbjct: 1339 MVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVL 1398
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS + M N +P+ Y LI G ++S + DA ++FE M +GI
Sbjct: 1399 ISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGI 1458
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML-- 461
P + + ++ C +G A++ RKVGC Y + +SG+ K G L
Sbjct: 1459 CPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTV---ISGYAKQGNLNG 1515
Query: 462 -LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L +M + + Y +I G C G + A + + P+ + Y+ L
Sbjct: 1516 ALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIG 1575
Query: 521 KLLASNKLESA 531
L +K+ A
Sbjct: 1576 SLFKKDKVLRA 1586
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 162/394 (41%), Gaps = 37/394 (9%)
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL-EDFGLKFDAESLN 237
FD + + L M+ G P L ++ ++ AG + KA +M R+ E +G + N
Sbjct: 1057 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCN 1116
Query: 238 VVLWCLCQRLHVGAASSLFNSMKGK----------------------------------- 262
+L L ++ A L++ M GK
Sbjct: 1117 RLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGA 1176
Query: 263 -VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
+ +V+ YN++I G+ + G + +L E+ +GF P +T+ LI LG+ G ++
Sbjct: 1177 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKI 1236
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+F M+++G P+ YN+VI + M K M + C+P++ T+ LI+G
Sbjct: 1237 GSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITG 1296
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L V A E + R + P+ + T + C G A + + G
Sbjct: 1297 LCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPD 1356
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ + L+ L GK L + +M E D IY +I+GLC L A ++E
Sbjct: 1357 VVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILE 1416
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
E L K P VY+ L + + S L A +F
Sbjct: 1417 EMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 1450
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 168/407 (41%), Gaps = 62/407 (15%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L ++ G+G D + + L V GKV EA+++ + V DV
Sbjct: 1344 LLVEMMGRGHTPDVVTFGALIHGLVVAGKV-------SEALIV--REKMTERQVFPDVNI 1394
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YNV++ L +++ N+L +M ++ V PD + ++D FIR+
Sbjct: 1395 YNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSE------------- 1441
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
++G A +F M+ K + ++++ N +I G+ + G +
Sbjct: 1442 ----------------------NLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMS 1479
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E + + G PD T++ +I G + G ++ A+ M ++ C P+ Y+++I
Sbjct: 1480 EAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLI 1539
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ Y GD D + M + PN+ TYT LI L K KV A FE ML
Sbjct: 1540 NGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCS 1599
Query: 405 PSTGTITSFLEPLCSYGP---------------PHAAMMMYKK-ARKVGCKLSLTAYKLL 448
P+ T+ + L S P A ++++KK +G + +AY +
Sbjct: 1600 PNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRN-SAYNAI 1658
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
+ L LD + M + GY + + ++ G C++G+ N
Sbjct: 1659 IFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVN 1705
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 183/393 (46%), Gaps = 25/393 (6%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+L++M ++G +P+ T + +++S + G+ +A +ML ++ + + D + N+V+ LC
Sbjct: 420 ILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLC 479
Query: 245 QRLHVGAASSLF--------------NSMKGKV---------LFNVMTYNIVISGWSKLG 281
+ + AS + N + G V + +V+TY +I+G K+G
Sbjct: 480 RNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVG 539
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
++ E ++ E++A+ PDS+T+ + + G+I A+ V M+ GC YN
Sbjct: 540 KLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYN 599
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
++I S G E M P++ TY +I+ L + K DA + EMLD+
Sbjct: 600 SLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDK 659
Query: 402 GIV-PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+V P+ + ++ C G A ++ A V C Y L+ L GK
Sbjct: 660 GVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSV-CGHKEALYSLMFNELLAGGKLSD 718
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+L+ E S +YE +I LC G+L++A ++++ + KG+C + + +
Sbjct: 719 AKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVID 778
Query: 521 KLLASNKLESAYNLFRKIKIARQNDYARRLWRS 553
L + A L R +++A ++ + R +R+
Sbjct: 779 GLSKRGNKQQADELGRIMELALEDKTSDRTYRN 811
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 178/405 (43%), Gaps = 31/405 (7%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V + ++N+++++L D + M+++G P+ T+ I++ F RAG+ +A+
Sbjct: 147 VNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQAL 206
Query: 219 QML-GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
+ + G++ G + N ++ C++ A L M K +L +V+T+N IS
Sbjct: 207 EFVDGKM---GGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISA 263
Query: 277 WSKLGQVVEMERVLKEIVAEGF----SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+ G+V E R+ +++ +G P+ +TF+ +++G + G +++A + +TMK+ G
Sbjct: 264 LCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGG 323
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
+YN + + G E M EPN+ +Y ++ GL ++ + DA
Sbjct: 324 NFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDAR 383
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+ + M+ G+ P T T T+ L CS G A + + + GC + LL L
Sbjct: 384 RLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSL 443
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF---- 508
G+ ++ +M E Y D V+ GLC G+LE A V+ E G
Sbjct: 444 WKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLG 503
Query: 509 ------------------CPSRLVYSKLSNKLLASNKLESAYNLF 535
P + Y+ L N L KLE A F
Sbjct: 504 KENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKF 548
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 165/364 (45%), Gaps = 44/364 (12%)
Query: 181 FMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVL 240
++ ++ +DM + GVNP+ T ++++ S + + A ++ ++ + G + + ++ +++
Sbjct: 134 YVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILV 193
Query: 241 WCLCQRLHVGAASSLFNSMKGKVLFNV--MTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
C+ G + GK+ NV + YN ++S + K E E++++ + +G
Sbjct: 194 RGFCR---AGRTKQALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGL 250
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG----CGPDTNAYNAVISNYISVGDFD 354
PD +TF+ I L RAG++ +A +F M+ G P+ +N ++ + G +
Sbjct: 251 LPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMME 310
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E + M ++++Y + GLL++ K+ + V +EM++ GI P+ + +
Sbjct: 311 EARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVM 370
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
+ LC MM+ AR+ L+DL M +G
Sbjct: 371 DGLC-----RNHMML--DARR-------------------------LMDL---MVSNGVY 395
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
D Y ++ G C+ G++ A ++ E +RKG P+ + L N L + A +
Sbjct: 396 PDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEM 455
Query: 535 FRKI 538
+K+
Sbjct: 456 LQKM 459
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 106/242 (43%), Gaps = 11/242 (4%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N+ D +Y+ V ++ VL DM + G + L+T + ++ GQ+++
Sbjct: 555 NLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEM 614
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVIS 275
++ + + G+ D + N ++ CLC+ A+SL + M KG V NV ++ I+I
Sbjct: 615 YGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIK 674
Query: 276 GWSKLGQ---VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+ K G E+ V + + SL F+ L+ G G++ DA E+F+ E+
Sbjct: 675 AFCKSGDFKVACELFDVALSVCGHKEALYSLMFNELLAG----GKLSDAKELFEASLERS 730
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK--SRKVAD 390
Y +I G D+ + + + ++ +I GL K +++ AD
Sbjct: 731 LLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQAD 790
Query: 391 AL 392
L
Sbjct: 791 EL 792
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/147 (19%), Positives = 63/147 (42%), Gaps = 2/147 (1%)
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
++ +M+ G+ P T T ++ LC A ++ K + GC+ + +L+R
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
G+ L+ + G + +Y +++ C + A ++E KG P +
Sbjct: 198 RAGRTKQALEFVD--GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVV 255
Query: 514 VYSKLSNKLLASNKLESAYNLFRKIKI 540
++ + L + K+ A +FR +++
Sbjct: 256 TFNSRISALCRAGKVFEASRIFRDMQM 282
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 197/451 (43%), Gaps = 12/451 (2%)
Query: 98 PEERLRGVFLQKLKGKGVIEDALWNV--NVDLSLDVVGKVVN---RGNLSGEAMVLFFNW 152
P + V + K G + +A V DL L + N + L +AM L W
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELL--W 228
Query: 153 AIKH----PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
+K + DV +Y+ ++A + + FD V +M + + T ++++
Sbjct: 229 KLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGL 288
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNV 267
R+G V +A + D+GL DA + ++ LC+ + A +L + M L N+
Sbjct: 289 CRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNI 348
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+ Y ++ G+ K G+ E +LKE+++ G P+ + + LI GL + G++ A ++
Sbjct: 349 VVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKE 408
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M + G PDT YN ++ + D D + M + PN+ +Y +I+GL ++ +
Sbjct: 409 MIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGE 468
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+A + EEM+ G+ P+ + G A +K K L Y
Sbjct: 469 SKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNS 528
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
L++ LS G+ + + ++Q+ G D Y +I G C G LE A ++ + L G
Sbjct: 529 LIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSG 588
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P+ Y+ L SN E ++ + +
Sbjct: 589 LKPNADTYTDLLEGYFKSNDYEKVSSILQSM 619
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 167/395 (42%), Gaps = 44/395 (11%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRA----GQVYKAIQMLGRLEDFGLKFDAESLNVV 239
++L +M GV P+ I+ D+ IR GQ+ +A ++L + GL+ D + N +
Sbjct: 369 DILKEMISAGVQPN----KIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPL 424
Query: 240 LWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
+ Q+ A L N M+ +L NV +Y I+I+G + G+ E +L+E+++EG
Sbjct: 425 MQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGL 484
Query: 299 SP-----------------------------------DSLTFSFLIEGLGRAGRIDDAIE 323
P D ++ LI+GL GR+++A E
Sbjct: 485 KPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEE 544
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+ ++++G PD Y+ +I Y G+ ++ + + M + +PN DTYT L+ G
Sbjct: 545 YYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYF 604
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
KS + + ML G P + L A M+ + K G L
Sbjct: 605 KSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLH 664
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
Y L+ L + L EM + G Y +I G C G + A V +
Sbjct: 665 IYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI 724
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
L KG P+ + Y+ L + + + A++L++++
Sbjct: 725 LAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEM 759
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 153/352 (43%), Gaps = 1/352 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
MA G+ P + ++ +RA + ++ G +E G+ D + + + C+
Sbjct: 199 MADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARD 258
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
AA +F M+ + N +TYN++ISG + G V E +E+V G SPD+ T+
Sbjct: 259 FDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGA 318
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
L+ GL + R+ +A + D M G P+ Y ++ ++ G E K M S
Sbjct: 319 LMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAG 378
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
+PN Y LI GL K ++ A ++ +EM+ G+ P T T ++ A
Sbjct: 379 VQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAF 438
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+ + R G ++ +Y +++ L G+ +L EM G + +Y +I G
Sbjct: 439 ELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGH 498
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G + A +E+ + P Y+ L L ++E A + +++
Sbjct: 499 SKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQ 550
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 166/366 (45%), Gaps = 2/366 (0%)
Query: 183 CNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWC 242
C L M K V+PDL + ++ G++ +A + +++ GL D + + ++
Sbjct: 508 CEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHG 567
Query: 243 LCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
C+ ++ A L M L N TY ++ G+ K ++ +L+ ++ G PD
Sbjct: 568 YCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPD 627
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+ + +I L R+ ++ A V +++ G PD + Y+++IS + D ++ +
Sbjct: 628 NHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLD 687
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M+ EP + Y LI G +S ++ A VF+ +L +G+VP+ T T+ ++ C G
Sbjct: 688 EMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNG 747
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
A +YK+ G Y +L S L L EM GY ++ ++
Sbjct: 748 DITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY-ANVSLFN 806
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
++ G C G+L+ ++ + + P+ K+ ++ + KL A+ +F +++
Sbjct: 807 TLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQK 866
Query: 542 RQNDYA 547
+ + A
Sbjct: 867 KASQSA 872
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 160/371 (43%), Gaps = 1/371 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN +++ ++ D +L++M G+ P++ + I+++ + G+ +A +L
Sbjct: 417 DTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLL 476
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ GLK +A ++ + ++ A M K V ++ YN +I G S +
Sbjct: 477 EEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTV 536
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ E E ++ G PD T+S LI G + G ++ A ++ M G P+ + Y
Sbjct: 537 GRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTY 596
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++ Y D+++ + M +P+ Y +I L +S + A V E+
Sbjct: 597 TDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEK 656
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+VP +S + LC A+ + + K G + + Y L+ G
Sbjct: 657 NGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISR 716
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+++ + G + Y +I G C G + +A + +E L +G P VY+ L+
Sbjct: 717 ARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLAT 776
Query: 521 KLLASNKLESA 531
+ LE A
Sbjct: 777 GCSDAADLEQA 787
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 121/269 (44%)
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
++++ + K G V +V+ + G +P + L++ L RA ++ ++ M+
Sbjct: 177 DVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEG 236
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
G PD Y+ I + DFD K ++ M +C N TY +ISGL +S V +
Sbjct: 237 AGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEE 296
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A EEM+D G+ P T + + LC A + + G K ++ Y L+
Sbjct: 297 AFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVD 356
Query: 451 RLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
GK D+ EM +G + +Y+ +I GLC IGQL A +++E ++ G P
Sbjct: 357 GFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRP 416
Query: 511 SRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y+ L + + A+ L +++
Sbjct: 417 DTFTYNPLMQGHFQQHDKDGAFELLNEMR 445
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 105/246 (42%), Gaps = 37/246 (15%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ + D+ Y+ ++ L + + +L +MAKEG+ P + + ++D F R+G
Sbjct: 654 VEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD 713
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
+ + A ++F+S+ K L N +TY
Sbjct: 714 ISR-----------------------------------ARNVFDSILAKGLVPNCVTYTA 738
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G K G + + + KE++ G +PD+ ++ L G A ++ A+ + + M +G
Sbjct: 739 LIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG 798
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
+ + +N ++ + G E K M PN T +++S K+ K+ +A
Sbjct: 799 YA-NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAH 857
Query: 393 EVFEEM 398
VF E+
Sbjct: 858 RVFAEL 863
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 207/476 (43%), Gaps = 54/476 (11%)
Query: 100 ERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNV 159
++ RG+F + + W D D+ +++ + +G+ + WAI N+
Sbjct: 28 DQARGLFFEMQE---------WRCKPDA--DIYNSLIHAHSRAGQ-----WRWAI---NI 68
Query: 160 AKDV---------KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIR 210
+D+ +YN ++ A G + + M + GV PDL T +IV+ +
Sbjct: 69 MEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKN 128
Query: 211 AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM---KGKVLFNV 267
Q KAI ++ + D +LN+++ CL + G A LFNSM + K +V
Sbjct: 129 GAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDV 188
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TY ++ + GQV + + +VAEG P+ + ++ L+ G +A+ +F+
Sbjct: 189 VTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNL 248
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
+K+ G PD +Y ++++ Y ++ + + M +C+PN +Y LI +
Sbjct: 249 IKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGM 308
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A+ + EM GI P +I++ L + + AR G L+ AY
Sbjct: 309 LKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNS 368
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE----- 502
++ FG L+L+ M+ES D Y +I+G +G+ ++ E+
Sbjct: 369 GIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSK 428
Query: 503 -----------------SLRKGFC-PSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
S++K C P L Y+ L A + A++LF+++++
Sbjct: 429 VSSTKEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEV 484
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 156/382 (40%), Gaps = 19/382 (4%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
SYN ++ A G +L +M K+G+ PD+ ++S ++ + R Q+ + +L
Sbjct: 295 SYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAA 354
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQV 283
G+ + + N + A L+ SM+ V + +TYNI+ISG SKLG+
Sbjct: 355 RSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKY 414
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E R +++V S + G++ +A F +MK+ GC PD Y +
Sbjct: 415 TESLRFFEDMVDSKVSST------------KEGKLSEAESTFSSMKKSGCFPDVLTYTTL 462
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I Y + G + +K M P+ + L+ K + L++ E M + I
Sbjct: 463 IQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSI 522
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM--- 460
+ S+ E + S + + LS + L L+ GKCG
Sbjct: 523 PLNQ---KSYFEIIASCTMIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTEN 579
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
++ L+++M S Y V+ L +G+ + V++ G P+ ++ +
Sbjct: 580 MMKLFYKMVTSCSTVGLSTYAVVLRNLLVVGKWRKYIEVLQWMEDSGVHPTLYMFQNVLP 639
Query: 521 KLLASNKLESAYNLFRKIKIAR 542
+ N ++ A + KI R
Sbjct: 640 YIWRENGMDFAATMQEKISSLR 661
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 115/275 (41%), Gaps = 8/275 (2%)
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
Y ++I +++ QV + + E+ PD+ ++ LI RAG+ AI + + M
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
P YN VI+ + G++ + ++ K M+ P++ T+ ++S L + +
Sbjct: 74 RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK--KARKVGCKLSLTAYKL 447
A+ FE M + T T+ + L G A+ ++ + R+ C + Y
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTS 193
Query: 448 LLRRLSGFGK---CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
++ +G+ C + DL M G + Y ++ + G A+ +
Sbjct: 194 IMHSYCIYGQVENCKAIFDL---MVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIK 250
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ G P + Y+ L N S + E A +F K+K
Sbjct: 251 KNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMK 285
>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 192/407 (47%), Gaps = 4/407 (0%)
Query: 135 VVNRGNLSGEA-MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG 193
V+NR GE M L F+ A+ D+ + N I+K + + + + + + G
Sbjct: 243 VMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIG 302
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ--RLHVGA 251
P++ T S ++D++ + G + KA + + G+ D ++++ L + RL G
Sbjct: 303 PKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQ 362
Query: 252 ASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
L KG + +V+ ++ + + K+G + + ++ K ++ EG SP+ ++ S LI+G
Sbjct: 363 RLLLVALDKG-IKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKG 421
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
+ GRI +A +F + + G P Y+A+I+ + G+ + Y+ M CEP+
Sbjct: 422 FCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPD 481
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
Y+ LI+GL K V DAL F + ++RG+ P+ T+ + L+ C AM +Y
Sbjct: 482 TIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYY 541
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ K Y +L++ + FG+ L L+ +M + + D Y +I GLC +
Sbjct: 542 LMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLK 601
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ + + + + P +Y+ L N LE+A LF +
Sbjct: 602 KSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHV 648
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 204/446 (45%), Gaps = 15/446 (3%)
Query: 102 LRGVFLQKLKGKGVIEDALWNV--------NVDLSLDVVGKVVNRGNLSGEAMVLFFNWA 153
L+G+++Q G + D +N+ NV ++ GNL +A VLF
Sbjct: 279 LKGIWMQNDIG---VADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLD-KAFVLF--DV 332
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+ V D+ Y++++ L + + +L +G+ D+ S MD++++ G
Sbjct: 333 MAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGD 392
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLF-NSMKGKVLFNVMTYNI 272
+ + IQ+ R+ + G+ + S ++++ CQ + A LF +K +++TY+
Sbjct: 393 LGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSA 452
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I+G+ K G + + + ++++ + PD++ +S LI GL + G + DA+ F +G
Sbjct: 453 LIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRG 512
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ N ++ ++ + MK Y M N + + TYT LI G + +V +AL
Sbjct: 513 LSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEAL 572
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
+F +ML + P T + ++ LC A + ++ K + Y +L+
Sbjct: 573 MLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMH 632
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
S G L L+ + E G D + +I CN +L++AV + + + P+
Sbjct: 633 SREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNA 692
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKI 538
+ ++ L + +++ A +F K+
Sbjct: 693 ITFTILIDAFCREGRMDDAMLMFSKM 718
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 168/360 (46%), Gaps = 8/360 (2%)
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ-R 246
DM K+ PD S++++ + G V A++ + + GL + +LN +L C+ +
Sbjct: 472 DMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLK 531
Query: 247 LHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
VGA + + + +TY I+I G ++ G+V E + +++ + F PD +T+
Sbjct: 532 CIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYC 591
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
LI+GL + + + +FD M + PD YN +I+ + G + + + +
Sbjct: 592 TLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVER 651
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
+P++ T+ +I +++ DA+++F +M + P+ T T ++ C G A
Sbjct: 652 GPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDA 711
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD----LWHEMQESGYPSDGEIYEY 482
M+M+ K + G + +L Y L+ G+ K +++ L++EM E+ + Y
Sbjct: 712 MLMFSKMLEEGPEPNLVTYSCLIH---GYFKSQSMMESGLKLYNEMLENNIAPNIVSYSI 768
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+I GLC G ++ A +L K P + Y+ L +L A L+ + + R
Sbjct: 769 LIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNR 828
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 153/339 (45%), Gaps = 13/339 (3%)
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL----CQRLHVGAASSLFNSM 259
+++S+ R G K++ + + G+ + ++L L C + V L ++M
Sbjct: 173 LIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGELCSAM 232
Query: 260 KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
+ + F+V Y V++ + G+V R K +V GF D +T + +++G+ I
Sbjct: 233 REQP-FSV--YEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIG 289
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
A + F+ + G P+ ++ +I Y G+ D+ + M+ P++ Y+ LI
Sbjct: 290 VADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILI 349
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
GL K+ ++ D + LD+GI +S ++ G + +YK+ G
Sbjct: 350 DGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGIS 409
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
++ + +L++ GF + G +L+ L+ ++ + G+ Y +IAG C G L +
Sbjct: 410 PNVVSCSILIK---GFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDG 466
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ E+ ++K P +VYS L N L + A F
Sbjct: 467 FYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFF 505
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 145 AMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIV 204
A+ LF + + P DV ++N ++ K D + + M E + P+ T +I+
Sbjct: 641 ALGLFVHVVERGPK--PDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTIL 698
Query: 205 MDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ-----RLHVGAASSLFNSM 259
+D+F R G++ A+ M ++ + G E V CL + + + L+N M
Sbjct: 699 IDAFCREGRMDDAMLMFSKMLEEG----PEPNLVTYSCLIHGYFKSQSMMESGLKLYNEM 754
Query: 260 -KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+ + N+++Y+I+I G K G + E + + + PD + ++ LI G + GR+
Sbjct: 755 LENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRL 814
Query: 319 DDAIEVFDTMKEKGCGPD 336
+A+ ++D M PD
Sbjct: 815 TEAMMLYDNMLLNRLTPD 832
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/307 (17%), Positives = 107/307 (34%), Gaps = 70/307 (22%)
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN----------------------- 338
S+ + FLIE R G D ++++F + KG N
Sbjct: 167 SVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYG 226
Query: 339 ------------AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
Y V++ +++ G+ + ++++K + ++ T +++ G+
Sbjct: 227 ELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQN 286
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+ A + F ++ G P+ T ++ ++ C G A +++ G L Y
Sbjct: 287 DIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYS 346
Query: 447 LLLRRL-------------------------SGF----------GKCGMLLDLWHEMQES 471
+L+ L GF G G ++ ++ M
Sbjct: 347 ILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNE 406
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
G + +I G C G++ A + + L+ GF PS L YS L S L
Sbjct: 407 GISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDG 466
Query: 532 YNLFRKI 538
+ L+ +
Sbjct: 467 FYLYEDM 473
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 160/336 (47%), Gaps = 3/336 (0%)
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
+++ + G+ AI++L +ED + + + ++ LC+ V A L++ M +
Sbjct: 121 LLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDARE 180
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+F NV+TYN +I + GQ++ +L E++ + +PD TFS LI+ L + G+ +A
Sbjct: 181 IFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAK 238
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
++F M + G P+ +YN +I+ DE M + M N P+ TY LI GL
Sbjct: 239 QIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGL 298
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
KS ++ AL + EM RG T TS L+ LC A ++ K ++ G + ++
Sbjct: 299 CKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTM 358
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L+ L G+ +L+ + G D Y +I+GLC G + A+ + +
Sbjct: 359 YTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSK 418
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P+ + + + L ++ + A L ++
Sbjct: 419 MEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 454
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 156/317 (49%), Gaps = 7/317 (2%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV Y+ I+ L + K + ++ S+M + P++ T + ++ +F AGQ+
Sbjct: 148 PNVV----MYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMG 203
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVIS 275
A +L + + D + ++++ LC+ A +F++M + V NV +YNI+I+
Sbjct: 204 AFSLLHEMILKNINPDVYTFSILIDALCKE--GKNAKQIFHAMVQMGVNPNVYSYNIMIN 261
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G K +V E +L+E++ + PD++T++ LI+GL ++GRI A+ + + M +G
Sbjct: 262 GLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPA 321
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D Y +++ + D+ + M +P M TYT LI GL K ++ +A E+F
Sbjct: 322 DVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELF 381
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
+ +L +G T T + LC G A+ + K GC + +++++R L
Sbjct: 382 QHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEK 441
Query: 456 GKCGMLLDLWHEMQESG 472
+ L HEM G
Sbjct: 442 DENDKAEKLLHEMIAKG 458
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 170/377 (45%), Gaps = 3/377 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ +N I+ +L + K++ + ++ M +G+ +L TLSI+++ F GQ+ + +LG
Sbjct: 10 IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLG 281
++ G + + ++ LC + V + + + N ++Y +++G K G
Sbjct: 70 KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ ++L+ I P+ + +S +I+GL + +++A +++ M + P+ YN
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I + G M N P++ T++ LI L K K +A ++F M+
Sbjct: 190 TLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQM 247
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G+ P+ + + LC AM + ++ Y L+ L G+
Sbjct: 248 GVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSA 307
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+L +EM G P+D Y ++ LC L+ A + + +G P+ Y+ L +
Sbjct: 308 LNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDG 367
Query: 522 LLASNKLESAYNLFRKI 538
L +L++A LF+ +
Sbjct: 368 LCKGGRLKNAQELFQHL 384
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 112/252 (44%), Gaps = 34/252 (13%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
A+ V +V SYN+++ L + K D N+L +M + + PD T + ++D ++G
Sbjct: 243 AMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSG 302
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNI 272
++ A+ ++ + G D + +L LC+ ++ A++LF MK
Sbjct: 303 RITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMK------------ 350
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
ER G P T++ LI+GL + GR+ +A E+F + KG
Sbjct: 351 --------------ER--------GIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG 388
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
C D Y +IS G FDE + M C PN T+ +I L + + A
Sbjct: 389 CCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAE 448
Query: 393 EVFEEMLDRGIV 404
++ EM+ +G++
Sbjct: 449 KLLHEMIAKGLL 460
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 86/205 (41%)
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
+N ++ + + + + + K M E N+ T + LI+ ++A + + ++L
Sbjct: 13 FNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKIL 72
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
G P+T T T+ ++ LC G + + K + + +Y LL L G+
Sbjct: 73 KLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETR 132
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ L +++ + +Y +I GLC + A + E + P+ + Y+ L
Sbjct: 133 CAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLI 192
Query: 520 NKLLASNKLESAYNLFRKIKIARQN 544
+ +L A++L ++ + N
Sbjct: 193 CAFCLAGQLMGAFSLLHEMILKNIN 217
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 167/369 (45%), Gaps = 18/369 (4%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +Y+ ++ L + + +M GV PD+ T +I++DSF +AG + +A +
Sbjct: 222 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 281
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ G + ++ + V A+ +F+ M N +TY ++ G K
Sbjct: 282 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 341
Query: 281 GQVVEMERVLKEIVA----------------EGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
G + + V +++ +P+ +T+ L++GL +A ++D A E+
Sbjct: 342 GNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHEL 401
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
D M GC P+ Y+A+I + G D + + M+ P++ TYT LI + K
Sbjct: 402 LDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFK 461
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
++ A++V +ML P+ T T+ ++ LC G A+ + + GC ++
Sbjct: 462 DGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVT 521
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y L+ L GK + LDL+ +M G + Y +I LC G L+ A L++ E +
Sbjct: 522 YTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGE-M 580
Query: 505 RKGFCPSRL 513
++ + P L
Sbjct: 581 KQTYWPKYL 589
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 163/378 (43%), Gaps = 17/378 (4%)
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNV 238
FD ++ +M ++G PD T S V+ A +V KA + ++ G+ D + +
Sbjct: 204 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 263
Query: 239 VLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
++ C+ + A LF M+ V+TY +I + K QV + + +V G
Sbjct: 264 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 323
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEV----------------FDTMKEKGCGPDTNAYN 341
P+ +T+ L++GL +AG I A EV F P+ Y
Sbjct: 324 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYG 383
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A++ D + M S CEPN Y LI G K+ K+ A EVF +M
Sbjct: 384 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 443
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G +PS T TS ++ + G AM + + K C ++ Y ++ L G+
Sbjct: 444 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKA 503
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L L M+E G + Y +I GL G+++ ++ + + RKG P+ + Y L N
Sbjct: 504 LKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINH 563
Query: 522 LLASNKLESAYNLFRKIK 539
L A+ L+ A L ++K
Sbjct: 564 LCAAGLLDKARLLLGEMK 581
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 191/416 (45%), Gaps = 29/416 (6%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A +LF +K V DV +Y +++ + + + + +M G +P + T +
Sbjct: 241 KAFLLF--QEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTA 298
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
++ ++++A QV +A + R+ D G + + + ++ LC+ ++ A ++ + G
Sbjct: 299 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 358
Query: 263 ----------------VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
+ NV+TY ++ G K +V +L +++ G P+ + +
Sbjct: 359 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 418
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
LI+G +AG+ID A EVF M + G P + Y ++I G D MK M
Sbjct: 419 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 478
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
+C PN+ TYT +I GL + + AL++ M ++G P+ T T+ ++ L G +
Sbjct: 479 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 538
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD----LWHEMQESGYPSDGEIYEY 482
+ ++ + + GC + Y++L+ L G LLD L EM+++ +P + Y
Sbjct: 539 LDLFTQMSRKGCSPNYVTYRVLINHLCAAG----LLDKARLLLGEMKQTYWPKYLQGYRC 594
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
I G ++ ++EE G P VY L + + +LE A L +++
Sbjct: 595 AIQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 648
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 125/524 (23%), Positives = 217/524 (41%), Gaps = 65/524 (12%)
Query: 70 SFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFL--QKLKGKGVIEDA-LWNVNVD 126
+F + + R V + V FL ++ FL Q++K GV D + + +D
Sbjct: 207 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 266
Query: 127 LSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVL 186
+ L +A LF ++ + V +Y ++ A + K ++
Sbjct: 267 --------SFCKAGLIEQAQWLFEE--MRSVGCSPTVVTYTALIHAYLKAKQVPQANDIF 316
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL------EDFGLKFDAE-----S 235
M G P+ T ++D +AG + KA ++ +L D F E +
Sbjct: 317 HRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLA 376
Query: 236 LNVVLWC-----LCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERV 289
NVV + LC+ V A L ++M N + Y+ +I G+ K G++ + V
Sbjct: 377 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 436
Query: 290 LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYIS 349
++ G+ P T++ LI+ + + GR+D A++V M + C P+ Y A+I
Sbjct: 437 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 496
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
+G+ ++ +K M C PN+ TYT LI GL K+ K+ +L++F +M +G P+ T
Sbjct: 497 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 556
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL--------------LLRRLSGF 455
+ LC+ G A ++ + ++ L Y+ +L + +
Sbjct: 557 YRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESY 616
Query: 456 GKC------GMLLD-------------LWHEMQE--SGYPSDGEIYEYVIAGLCNIGQLE 494
G GML+D L EM E S +D ++Y +I LC Q+E
Sbjct: 617 GTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVE 676
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
A + E R+GF P V+ L L+ K + A L I
Sbjct: 677 EAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGI 720
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 203/470 (43%), Gaps = 43/470 (9%)
Query: 104 GVFLQKLKGKGVIEDALWNVN-VDLSLDVVGKVVNRGNLSGEAMVLFFNWAI------KH 156
G F L +G DAL + D LD V + +SG +F+ A+ +
Sbjct: 14 GCFAHALCKEGRWADALDMIEREDFKLDTV---LCTHMISGLMEASYFDEAMSFLHRMRC 70
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
+ +V +Y ++ ++K + +++ M EG NP+ + ++ S+
Sbjct: 71 NSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAY 130
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLC--QRLHVGAASSLFNSMKGKVL--------FN 266
A ++L R+ G N+ + +C ++L L + G++L N
Sbjct: 131 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVN 190
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
V + + G K + ++ +KE++ +GF PD+ T+S +I L A +++ A +F
Sbjct: 191 VANFARCLCGVGKFDKAFQL---IKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQ 247
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
MK G PD Y +I ++ G ++ ++ M S C P + TYT LI LK++
Sbjct: 248 EMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAK 307
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS----- 441
+V A ++F M+D G P+ T + ++ LC G A +Y A+ +G S
Sbjct: 308 QVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVY--AKLIGTSDSADSDF 365
Query: 442 -------------LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ Y L+ L K +L M SG + +Y+ +I G C
Sbjct: 366 YFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFC 425
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G++++A V + + G+ PS Y+ L +++ +L+ A + ++
Sbjct: 426 KAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 475
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 9/250 (3%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
GF D T L + GR DA+++ + K DT +IS + FDE
Sbjct: 5 GFCMDRFTVGCFAHALCKEGRWADALDMIEREDFK---LDTVLCTHMISGLMEASYFDEA 61
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
M + M +C PN+ TY L+SG LK +++ + M+ G P+ S +
Sbjct: 62 MSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHS 121
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM--LLDLWHEMQESGYP 474
C+ A + + GC Y + + + G K LLDL ++
Sbjct: 122 YCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLA 181
Query: 475 SDGEIYEYVIAG----LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
++ + + +A LC +G+ + A +++E +RKGF P YSK+ L + K+E
Sbjct: 182 ANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEK 241
Query: 531 AYNLFRKIKI 540
A+ LF+++K+
Sbjct: 242 AFLLFQEMKM 251
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 99/256 (38%), Gaps = 6/256 (2%)
Query: 290 LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYIS 349
L I E F D++ + +I GL A D+A+ M+ C P+ Y ++S ++
Sbjct: 30 LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 89
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
C + M + C PN + L+ + A A ++ M G P
Sbjct: 90 KKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVV 149
Query: 410 ITSFLEPLCSYGP-PHAAMM-----MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
F+ +C P ++ +Y + C L+ R L G GK
Sbjct: 150 YNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQ 209
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
L EM G+ D Y VI LC+ ++E A L+ +E G P Y+ L +
Sbjct: 210 LIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFC 269
Query: 524 ASNKLESAYNLFRKIK 539
+ +E A LF +++
Sbjct: 270 KAGLIEQAQWLFEEMR 285
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 116/281 (41%), Gaps = 8/281 (2%)
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+ISG + E L + P+ +T+ L+ G + ++ + + M +G
Sbjct: 48 MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEG 107
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD-- 390
C P+ + +N+++ +Y + D+ K M++ C P Y I + K+
Sbjct: 108 CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 167
Query: 391 ----ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
A +++ EML V + + +F LC G A + K+ + G + Y
Sbjct: 168 LLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYS 227
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
++ L K L+ EM+ G D Y +I C G +E A + EE
Sbjct: 228 KVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 287
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA--RQND 545
G P+ + Y+ L + L + ++ A ++F ++ A R ND
Sbjct: 288 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND 328
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 184/406 (45%), Gaps = 15/406 (3%)
Query: 135 VVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGV 194
++ R S + +V+F I + + SY +VKAL R D C+ +++MA+E +
Sbjct: 9 LLERARRSEQIVVVFRR--IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKL 66
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
PD+ T ++V+D+ +A ++ +AI+ + + D + N +L LC+ V A S
Sbjct: 67 VPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACS 122
Query: 255 LFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
LF SM+G + + +TY +I + K+ Q +L+ + + SP ++ +I GL
Sbjct: 123 LFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLC 182
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+ ++D A ++F+ MK GC PD YN +I E M +P+
Sbjct: 183 KNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKI 242
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
T+T LI GL + ++ +A +F+ M +G P T T + LC A+ + +
Sbjct: 243 TFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNY 302
Query: 434 RKVGCKLSLTAYKLLLRRLS---GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
C ++ Y + R L GF + LL +M G P + Y GL +
Sbjct: 303 P--ACPEAVILYTPIFRELGRRRGFDRAARLL---QKMARRGVPPNVVTYTAFFKGLGDW 357
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
+ A L +G P + Y+ L + +++L+ A + R
Sbjct: 358 KEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVR 403
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 153/380 (40%), Gaps = 34/380 (8%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN ++ L + C++ M G+ P T + ++D F + Q A +L
Sbjct: 100 DVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLL 159
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
+ S ++ LC+ V A LF MK + +TYN +I G
Sbjct: 160 QLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVK 219
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
++ E + +L +V GF PD +TF+ LIEGL RI +A +F M ++GC PD +
Sbjct: 220 QRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTH 279
Query: 341 NAVIS----------------NYISVGD-----------------FDECMKYYKGMSSYN 367
++S NY + + FD + + M+
Sbjct: 280 TVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRG 339
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
PN+ TYT GL ++ A F ML++GI P ++ C A
Sbjct: 340 VPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAE 399
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
M + + G ++ Y L+ GK + +L H M G D + ++AGL
Sbjct: 400 KMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGL 459
Query: 488 CNIGQLENAVLVMEESLRKG 507
+GQ + A + ++ +G
Sbjct: 460 FMVGQADAAYSFLNLAMSQG 479
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 166/377 (44%), Gaps = 11/377 (2%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+ N ++ L R + + + V + + P+ + ++ + R G++ KA + +
Sbjct: 2 TCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEM 61
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVV 284
L D + NVV+ LC+ + A F +M +V+TYN ++ G K G+V
Sbjct: 62 AREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEP---DVVTYNTLLGGLCKNGRVA 118
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ + + G +P +T++ LI+ + + + A + M + C P +Y ++I
Sbjct: 119 QACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSII 178
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ D+ + ++ M C+P+ TY LI GL +++ +A ++ M++ G
Sbjct: 179 NGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQ 238
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P T T+ +E LC+ A ++++ K GC L + +L+ +L K L +
Sbjct: 239 PDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSV 298
Query: 465 WHEMQESGYPSDGE---IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
YP+ E +Y + L + A ++++ R+G P+ + Y+
Sbjct: 299 VRN-----YPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKG 353
Query: 522 LLASNKLESAYNLFRKI 538
L + AY FR++
Sbjct: 354 LGDWKEGMRAYREFRRM 370
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 110/265 (41%), Gaps = 31/265 (11%)
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
+T + L++ L RA R + + VF + + C P+ +Y ++ G D+
Sbjct: 1 VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD---------------------- 400
M+ P++ TY +I L K+R+++ A+E FE M +
Sbjct: 61 MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEPDVVTYNTLLGGLCKNGRVAQA 120
Query: 401 ---------RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
GI PS T T+ ++ C A + + C ++ +Y ++
Sbjct: 121 CSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIING 180
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L K L+ EM+ +G D Y +I GLC +L A ++ + GF P
Sbjct: 181 LCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPD 240
Query: 512 RLVYSKLSNKLLASNKLESAYNLFR 536
++ ++ L L +++++ A+ LF+
Sbjct: 241 KITFTALIEGLCTTDRIKEAFVLFQ 265
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 85/178 (47%), Gaps = 1/178 (0%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
+P + V Y I + LGRR+ FD +L MA+ GV P++ T + +
Sbjct: 302 YPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGM 361
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVI 274
+A + R+ + G++ D + NV++ C+ + A + M + + N++TYN ++
Sbjct: 362 RAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLV 421
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+ G+V + +L +V+ G PD T+S L+ GL G+ D A + +G
Sbjct: 422 GHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 172/380 (45%), Gaps = 9/380 (2%)
Query: 145 AMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL---ETL 201
A+ +F HP + +Y+ I+ L R + FD + ++++D+ P + E L
Sbjct: 63 ALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADL--RNSYPPIKCGENL 120
Query: 202 SI-VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
I ++ ++ AG+ ++++ R+ DFG+K SLN +L L Q ++F + K
Sbjct: 121 FIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSK 180
Query: 261 GK--VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+ N+ T N+++ K + +VL EI A G P+ +T++ ++ G G +
Sbjct: 181 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDM 240
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
+ A V + M ++G PD Y ++ Y +G F E M EPN TY +
Sbjct: 241 ESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 300
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I L K +K +A +F+EMLDR +P + ++ LC A +++K K C
Sbjct: 301 IRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNC 360
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
L+ L G+ L+ E + PS Y +IAG+C G+L A
Sbjct: 361 MPDNALLSTLIHWLCKEGRVSEARKLFDEFDKGSIPS-LLTYNTLIAGMCEKGELTEAGR 419
Query: 499 VMEESLRKGFCPSRLVYSKL 518
+ ++ + P+ Y+ L
Sbjct: 420 LWDDMFERKCKPNAFTYNVL 439
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 167/352 (47%), Gaps = 5/352 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKE--GVNPDLETLSIVMDSFIRAGQVYK 216
V + V+S N ++ L + + FD + + + +KE G+ P++ T ++++ + + +
Sbjct: 149 VKRSVRSLNTLLNVLIQNQRFDLVHAMFKN-SKESFGITPNIFTCNLLVKALCKKNDIES 207
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVIS 275
A ++L + GL + + +L R + +A + M + + + +TY +++
Sbjct: 208 AYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMD 267
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G+ KLG+ E V+ ++ P+ +T+ +I L + + +A +FD M ++ P
Sbjct: 268 GYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMP 327
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D++ VI DE ++ M NC P+ + LI L K +V++A ++F
Sbjct: 328 DSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLF 387
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
+E D+G +PS T + + +C G A ++ + CK + Y +L+ LS
Sbjct: 388 DE-FDKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKN 446
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
G + + EM ESG + + + GL +G+ E+A+ ++ ++ G
Sbjct: 447 GNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAVMNG 498
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 142/310 (45%), Gaps = 5/310 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y I+ R + VL +M G PD T +++MD + + G+ +A ++ +
Sbjct: 226 TYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDM 285
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNI-VISGWSKLGQV 283
E ++ + + V++ LC+ G A ++F+ M + + VI + +V
Sbjct: 286 EKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKV 345
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
E + ++++ PD+ S LI L + GR+ +A ++FD +KG P YN +
Sbjct: 346 DEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEF-DKGSIPSLLTYNTL 404
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I+ G+ E + + M C+PN TY LI GL K+ V + + V EEML+ G
Sbjct: 405 IAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGC 464
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL- 462
P+ T E L G A+ + A G K+ +++L L + G G+L
Sbjct: 465 FPNKTTFLILFEGLQKLGKEEDAIKIVSMAVMNG-KVDKESWELFLNKFVGELDKGVLAL 523
Query: 463 -DLWHEMQES 471
+L HE+ S
Sbjct: 524 KELLHEISVS 533
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 115/265 (43%), Gaps = 5/265 (1%)
Query: 131 VVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMA 190
++G V RG++ VL + D +Y V++ + F V+ DM
Sbjct: 230 ILGGYVARGDMESAKRVL---EEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDME 286
Query: 191 KEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVG 250
K + P+ T +++ + + + +A M + D D+ V+ LC+ V
Sbjct: 287 KNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVD 346
Query: 251 AASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
A L+ M K + + + +I K G+V E ++ E +G P LT++ LI
Sbjct: 347 EACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEF-DKGSIPSLLTYNTLI 405
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
G+ G + +A ++D M E+ C P+ YN +I G+ E ++ + M C
Sbjct: 406 AGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCF 465
Query: 370 PNMDTYTRLISGLLKSRKVADALEV 394
PN T+ L GL K K DA+++
Sbjct: 466 PNKTTFLILFEGLQKLGKEEDAIKI 490
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 228/496 (45%), Gaps = 30/496 (6%)
Query: 54 HVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGK 113
H+LKELS +S +SF V+ + + + +S+ +V + L+ V+L++
Sbjct: 133 HILKELS---LMSGKSSF--VFG-ALMTTYRLCNSNPSVYDILIR------VYLRE---- 176
Query: 114 GVIEDAL----------WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDV 163
G+I+D+L +N +V ++G VV G + V F + + DV
Sbjct: 177 GMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGE---DVSVWSFLKEMLKRKICPDV 233
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
++N+++ L F+ ++ M K G P + T + V+ + + G+ AI++L
Sbjct: 234 ATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 293
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQ 282
++ G+ D + N+++ LC+ + L M+ +++ N +TYN +I+G+S G+
Sbjct: 294 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 353
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V+ ++L E+++ G SP+ +TF+ LI+G G +A+++F M+ KG P +Y
Sbjct: 354 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 413
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
++ +FD +Y M TYT +I GL K+ + +A+ + EM G
Sbjct: 414 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 473
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
I P T ++ + C G A + + +VG + Y L+ G +
Sbjct: 474 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 533
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
++ M G+ D + ++ LC G++ A M G P+ + + L N
Sbjct: 534 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 593
Query: 523 LASNKLESAYNLFRKI 538
S + A+++F ++
Sbjct: 594 GNSGEGLKAFSVFDEM 609
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 170/398 (42%), Gaps = 41/398 (10%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HPN +YN ++ +L++M G++P+ T + ++D I G
Sbjct: 335 HPNEV----TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 390
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK------GKVLF---- 265
+A++M +E GL S V+L LC+ A + MK G++ +
Sbjct: 391 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 450
Query: 266 --------------------------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS 299
+++TY+ +I+G+ K+G+ + ++ I G S
Sbjct: 451 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 510
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P+ + +S LI R G + +AI +++ M +G D +N ++++ G E ++
Sbjct: 511 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 570
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ M+S PN ++ LI+G S + A VF+EM G P+ T S L+ LC
Sbjct: 571 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 630
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
G A K V + Y LL + G + L+ EM + D
Sbjct: 631 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 690
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKG-FCPSRLVYS 516
Y +I+GLC G+ A+L +E+ +G P++++Y+
Sbjct: 691 YTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 728
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 177/417 (42%), Gaps = 19/417 (4%)
Query: 141 LSGEAMVLFFNWAIKHPNVAKD--VKSYNVIVKALGRRKFFDFMCNVLSDMAKEG----- 193
+ G+ + F W +K P + D V+ + L R + +D ++L +++
Sbjct: 88 VHGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSF 147
Query: 194 -----------VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWC 242
N + I++ ++R G + ++++ + +G + N +L
Sbjct: 148 VFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGS 207
Query: 243 LCQRLH-VGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
+ + V S L +K K+ +V T+NI+I+ G + +++++ G++P
Sbjct: 208 VVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPT 267
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+T++ ++ + GR AIE+ D MK KG D YN +I + + +
Sbjct: 268 IVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLR 327
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M PN TY LI+G KV A ++ EML G+ P+ T + ++ S G
Sbjct: 328 DMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG 387
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
A+ M+ G S +Y +LL L + + + M+ +G Y
Sbjct: 388 NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 447
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+I GLC G L+ AV+++ E + G P + YS L N + ++A + +I
Sbjct: 448 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 504
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 156/390 (40%), Gaps = 37/390 (9%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
+V +M K G +P T ++ + G + +A + L L D N +L +
Sbjct: 604 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 663
Query: 244 CQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG-FSPD 301
C+ ++ A SLF M + +L + TY +ISG + G+ V KE A G P+
Sbjct: 664 CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 723
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+ ++ ++G+ +AG+ I + M G PD NA+I Y +G ++
Sbjct: 724 KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLP 783
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M + N PN+ TY L+ G K + V+ + ++ ++ GI+P T S + +C
Sbjct: 784 EMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 843
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL----------------- 464
+ + K G ++ + +L+ + G+ DL
Sbjct: 844 MLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCD 903
Query: 465 ------------------WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
HEM + G + Y +I GLC +G ++ A +V EE +
Sbjct: 904 AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 963
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
CP + S + L K + A L R
Sbjct: 964 KICPPNVAESAMVRALAKCGKADEATLLLR 993
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 163/372 (43%), Gaps = 14/372 (3%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
++F + + D+ + N ++ R + ++L +M + P+L T +I++
Sbjct: 744 IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG 803
Query: 208 FIRAGQV------YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+ + V Y++I + G L D K SL V+ C L +G +G
Sbjct: 804 YSKRKDVSTSFLLYRSIILNGILPD---KLTCHSL-VLGICESNMLEIGLKILKAFICRG 859
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
V + T+N++IS G++ ++K + + G S D T ++ L R R ++
Sbjct: 860 -VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 918
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN-CEPNMDTYTRLIS 380
V M ++G P++ Y +I+ VGD + M ++ C PN+ + ++
Sbjct: 919 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV-AESAMVR 977
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
L K K +A + ML +VP+ + T+ + C G A+ + G KL
Sbjct: 978 ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL 1037
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG-LCNIGQLENAVLV 499
L +Y +L+ L G + +L+ EM+ G+ ++ Y+ +I G L A ++
Sbjct: 1038 DLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADII 1097
Query: 500 MEESLRKGFCPS 511
+++ L +GF S
Sbjct: 1098 LKDLLARGFITS 1109
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 144/356 (40%), Gaps = 1/356 (0%)
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
M G PD+ T + ++D + R G++ K +L + + + + N++L +R
Sbjct: 749 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 808
Query: 248 HVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
V + L+ S+ +L + +T + ++ G + + ++LK + G D TF+
Sbjct: 809 DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 868
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
LI G I+ A ++ M G D + +A++S F E MS
Sbjct: 869 MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ 928
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
P Y LI+GL + + A V EEM+ I P ++ + L G A
Sbjct: 929 GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 988
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
++ + K+ ++ ++ L+ G L+L M G D Y +I G
Sbjct: 989 TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITG 1048
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
LC G + A + EE GF + Y L LLA S ++ K +AR
Sbjct: 1049 LCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLAR 1104
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 105/274 (38%), Gaps = 35/274 (12%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V T N ++ K G+ V + LKE++ PD TF+ LI L G + + +
Sbjct: 197 SVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLM 256
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
M++ G P YN V+ Y G F ++ M S + ++ TY LI L +S
Sbjct: 257 QKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRS 316
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
++A + +M R I P+ T Y
Sbjct: 317 NRIAKGYLLLRDMRKRMIHPNEVT-----------------------------------Y 341
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ S GK + L +EM G + + +I G + G + A+ +
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
KG PS + Y L + L + + + A + ++K
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 435
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 1/178 (0%)
Query: 363 MSSYN-CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M++Y C N Y LI L+ + D+LE+F M G PS T + L + G
Sbjct: 153 MTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG 212
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
+ K+ K + + +L+ L G L +M++SGY Y
Sbjct: 213 EDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYN 272
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
V+ C G+ + A+ +++ KG Y+ L + L SN++ Y L R ++
Sbjct: 273 TVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 330
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 188/421 (44%), Gaps = 50/421 (11%)
Query: 132 VGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR---------RKFFDFM 182
+G V+N+ N+S A L K +++ +I + +G+ K F+
Sbjct: 419 LGVVLNKVNVSNFARCLC--------GAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFL 470
Query: 183 CN---------VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA 233
C+ + +M + G+ P + T +I++DSF +AG + +A + + G +
Sbjct: 471 CDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNV 530
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV--------- 283
+ ++ + + A LF M + NV+TY +I G K GQ+
Sbjct: 531 VTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYAR 590
Query: 284 -------VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+M++ K P+ +T+ L++GL +A R+ +A E+ DTM GC P+
Sbjct: 591 MRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPN 650
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y+AVI + +G + + + MS PN+ TY+ I L K ++ L+V
Sbjct: 651 QIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLS 710
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
+ML+ P+ T ++ LC G A + K + GC ++ Y + + GFG
Sbjct: 711 KMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAM---IDGFG 767
Query: 457 KCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
K G + L+L+ +M G + Y +I C+ G L+ A +++E +++ + P +
Sbjct: 768 KSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDE-MKQTYWPKHI 826
Query: 514 V 514
+
Sbjct: 827 L 827
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 168/378 (44%), Gaps = 17/378 (4%)
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNV 238
FD ++ +M +G PD T S V+ A +V KA + ++ G+ + +
Sbjct: 441 FDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTI 500
Query: 239 VLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
++ C+ + A F+ M K NV+TY +I + K Q+ + + + ++ EG
Sbjct: 501 LIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEG 560
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK---------------EKGC-GPDTNAYN 341
P+ +T++ LI+G +AG+I+ A +++ M+ C GP+ Y
Sbjct: 561 CKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYG 620
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A++ E + M ++ CEPN Y +I G K K+ DA EVF +M +R
Sbjct: 621 ALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSER 680
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G P+ T +SF++ L + + K + C ++ Y ++ L GK
Sbjct: 681 GYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEA 740
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L +M+E G + Y +I G G++E + + + KG P+ + Y L N
Sbjct: 741 YKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINH 800
Query: 522 LLASNKLESAYNLFRKIK 539
++ L+ AY L ++K
Sbjct: 801 CCSNGLLDEAYKLLDEMK 818
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 170/383 (44%), Gaps = 20/383 (5%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
H +V +Y ++ A + K + M EG P++ T + ++D +AGQ+
Sbjct: 523 HKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIE 582
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVIS 275
KA Q+ R+ + D ES ++ + N+ +G NV+TY ++
Sbjct: 583 KACQIYARM-----RGDIESSDMDKYFKLDH----------NNCEGP---NVITYGALVD 624
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G K +V E +L ++A G P+ + + +I+G + G++ DA EVF M E+G P
Sbjct: 625 GLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSP 684
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+ Y++ I D +K M +C PN+ YT ++ GL K K +A ++
Sbjct: 685 NLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLM 744
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
+M ++G P+ T T+ ++ G + +++ GC + Y++L+
Sbjct: 745 LKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSN 804
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
G L EM+++ +P + +I G + ++ +++E P +Y
Sbjct: 805 GLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQ--EFITSIGLLDELSENESVPVDSLY 862
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
L + + + +LE A +L +I
Sbjct: 863 RILIDNYIKAGRLEVALDLLEEI 885
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 184/435 (42%), Gaps = 34/435 (7%)
Query: 122 NVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDF 181
+N L ++V+ V N E V FF WA + + + ++ ++ LG
Sbjct: 103 QLNDSLVVEVMNNVKN-----PELCVKFFLWAGRQIGYSHTPQVFDKLLDLLG------- 150
Query: 182 MCNVLSD------MAKEGVNPDLETLSIVMDSFIRA----GQVYKAIQMLGRLEDFGLKF 231
CNV +D E + D E L +++ +R G A++ LGRL+DFG K
Sbjct: 151 -CNVNADDRVPLKFLMEIKDDDHELLRRLLNFLVRKCCRNGWWNMALEELGRLKDFGYKP 209
Query: 232 DAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS--KLGQVVEMERV 289
+ N ++ + + A + M F + Y + +S K G+ E +
Sbjct: 210 SQTTYNALIQVFLRADKLDTAYLVKREMLSYA-FVMDRYTLSCFAYSLCKGGKCREAFDL 268
Query: 290 LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYIS 349
+ E AE F PD++ ++ ++ GL A ++A+++ M+ C P+ Y ++S +
Sbjct: 269 IDE--AEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLR 326
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
G C + M + C PN + + LI KSR + A ++F++M+ G P
Sbjct: 327 KGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLV 386
Query: 410 ITSFLEPLCSYGPPHAAMMM------YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
F+ +CS ++ ++ Y + +G L+ R L G GK
Sbjct: 387 YNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFK 446
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ EM G+ D Y VI LC+ ++E A + EE R G PS Y+ L +
Sbjct: 447 IICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFC 506
Query: 524 ASNKLESAYNLFRKI 538
+ ++ A F ++
Sbjct: 507 KAGLIQQARKWFDEM 521
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/412 (20%), Positives = 168/412 (40%), Gaps = 23/412 (5%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F+ + + D YN +V L F+ ++L M P++ T I++ +
Sbjct: 266 FDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCL 325
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------KGKV 263
R GQ+ + ++L + G + E N ++ C+ A LF M G +
Sbjct: 326 RKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYL 385
Query: 264 LFNVMTYNIVISGWSKLGQVVEM-ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
++N+ ++ + ++++ E+ E++ G + + S L AG+ D A
Sbjct: 386 VYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAF 445
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
++ M KG PD + Y+ VI ++ ++ M P++ TYT LI
Sbjct: 446 KIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSF 505
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K+ + A + F+EML +G P+ T T+ + A +++ GCK ++
Sbjct: 506 CKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNV 565
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE----------------IYEYVIAG 486
Y L+ G+ ++ M+ SD + Y ++ G
Sbjct: 566 VTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDG 625
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
LC +++ A +++ L G P+++VY + + KL+ A +F K+
Sbjct: 626 LCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKM 677
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 156/382 (40%), Gaps = 9/382 (2%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN +++ R D V +M D TLS S + G+ +A ++
Sbjct: 213 TYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEA 272
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
EDF D N ++ LC+ A + + M+ + NV+TY I++SG + GQ+
Sbjct: 273 EDFVP--DTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQL 330
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+R+L ++ EG P+ F+ LI ++ A ++F M + GC P YN
Sbjct: 331 GRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIF 390
Query: 344 ISNYISVGD------FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
I + S + D K Y M N + L + K A ++ E
Sbjct: 391 IGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICE 450
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M+ +G VP T + + LC A ++++ ++ G S+ Y +L+ G
Sbjct: 451 MMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGL 510
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+ EM G + Y +I Q+ A + E L +G P+ + Y+
Sbjct: 511 IQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTA 570
Query: 518 LSNKLLASNKLESAYNLFRKIK 539
L + + ++E A ++ +++
Sbjct: 571 LIDGHCKAGQIEKACQIYARMR 592
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 130/317 (41%), Gaps = 42/317 (13%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV Y +V L + D ++ M ++G NP++ T + ++D F ++G++ +
Sbjct: 719 PNVV----IYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQ 774
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVIS 275
+++ + G + + V++ C + A L + MK +++++ +I
Sbjct: 775 CLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIE 834
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G+S+ + + +L E+ P + LI+ +AGR++ A+++ + +
Sbjct: 835 GFSQ--EFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHA 892
Query: 336 DTNA--YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
+N Y ++I N D+ ++ Y M S N P + LI GL+K K +AL+
Sbjct: 893 VSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQ 952
Query: 394 V-------------------FEEMLDRGIV----PSTGTITSFLEP----------LCSY 420
+ EEM+ I TG LE LC +
Sbjct: 953 LSDSICQMDIHWLQEKATGRTEEMVKLVIAAMVEAETGVSEEILERCSSYSINVRILCFF 1012
Query: 421 GPPHAAMMMYKKARKVG 437
GPP +M R G
Sbjct: 1013 GPPIHHYIMQHANRSQG 1029
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 174/373 (46%), Gaps = 1/373 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
++Y V++KA D +L +MA + P++ T +I++D R G++ +A +
Sbjct: 300 TRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFR 359
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLG 281
++ GL + N ++ C+ V +A L + M KG N+ TYN ++ G ++
Sbjct: 360 KMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVS 419
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ + +L+ +V G PD +T++ L++G + G+++ A +F++M G PD +
Sbjct: 420 KSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFT 479
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A+I +G ++ M + T+T LI G K K D +FE M++
Sbjct: 480 ALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVEN 539
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
+ + T FL+ L + A M K K G S+ + +L+ G+ +
Sbjct: 540 RCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALS 599
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L + M+++G + Y +I GLCN G++E A ++ G P+ Y+ L
Sbjct: 600 LKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKA 659
Query: 522 LLASNKLESAYNL 534
+ + +L+ A+ +
Sbjct: 660 HVKAGRLDRAFQI 672
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 185/412 (44%), Gaps = 9/412 (2%)
Query: 141 LSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
++ +AM + A K +V +Y +++ L R + V M K G+ P + T
Sbjct: 315 MTDKAMKMLDEMATKA--CVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIIT 372
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM- 259
+ +++ + + G V A Q+L +E K + + N ++ LC+ A L +
Sbjct: 373 FNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVV 432
Query: 260 KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
+L + +TYNI++ G+ K GQ+ + + + G PD TF+ LI+GL + GR++
Sbjct: 433 DNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLE 492
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
A + +M +KG D + A+I + +G + ++ M C T+ +
Sbjct: 493 QANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFL 552
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
L K K+ +A + +M+ G+VPS T T +E C G ++ M ++ ++ GC
Sbjct: 553 DALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCS 612
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
++ Y +++ L G+ + M G + Y ++ G+L+ A +
Sbjct: 613 PNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQI 672
Query: 500 MEESLRKGFCPSRLVYSK------LSNKLLASNKLESAYNLFRKIKIARQND 545
+ ++ G P+ +YS LSN + + L S +L + + +ND
Sbjct: 673 VSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEEND 724
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 189/454 (41%), Gaps = 66/454 (14%)
Query: 127 LSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDF----- 181
++ + GK++ + + E V FF W + + D+ ++ L R F
Sbjct: 67 MTPHLAGKIIGLQSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAV 126
Query: 182 ----------------MCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
+ L M + G S ++ + + A + R+
Sbjct: 127 VLLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMV 186
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTY---NIVISGWSK--L 280
+ G V+ LC+ V AA +F ++ F + T+ ++V++ + L
Sbjct: 187 NEGFVLGGIDYRTVVNALCKNGFVQAAE-MFCCKVLRLGFGLDTHVCTSLVLANCRRDDL 245
Query: 281 GQVVEM-ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G+ + E++ KE E P+S+T+S LI GL AGR+++A ++ M EKGC P T
Sbjct: 246 GEAFRVFEKMSKE---ENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRT 302
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y +I +G D+ MK M++ C PN+ TYT LI L + K+ +A VF +ML
Sbjct: 303 YTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKML 362
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK------------- 446
G+ P T + + C G +A + K CK ++ Y
Sbjct: 363 KHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSY 422
Query: 447 ---LLLRR----------------LSGF---GKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
LLLRR + GF G+ M ++++ M +G DG + +I
Sbjct: 423 KAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALI 482
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
GLC +G+LE A ++ ++KG + ++ L
Sbjct: 483 DGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 516
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 181/428 (42%), Gaps = 67/428 (15%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F +KH + + ++N ++ + + +LS M K P++ T + +M+
Sbjct: 358 FRKMLKH-GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 416
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVM 268
R + YKA +L R+ D GL D + N+++ C+ + A ++FNSM L +
Sbjct: 417 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 476
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
T+ +I G KLG++ + +L +V +G S D +TF+ LI+G + G+ D +F+ M
Sbjct: 477 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 536
Query: 329 KEKGCGPDTNAYNA-----------------------------------VISNYISVGDF 353
E C + +N +I + G+
Sbjct: 537 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 596
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
+K + M C PN+ TYT +I+GL + +V +A + M G+ P+ T
Sbjct: 597 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVL 656
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL------------RRLSGFGKCGML 461
++ G A + K GC+ + Y LL R LS G
Sbjct: 657 VKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGD---- 712
Query: 462 LD-------------LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
LD L +E+++ G P++ ++Y +++ GLC G++ A + ++ ++ G
Sbjct: 713 LDARSLSSEENDNNCLSNEIKKCGVPTE-DLYNFLVVGLCKEGRIIEADQLTQDMVKHGL 771
Query: 509 CPSRLVYS 516
P + + S
Sbjct: 772 FPDKAISS 779
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/285 (16%), Positives = 115/285 (40%), Gaps = 57/285 (20%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K + +V +Y +I+ L + +L M+ GV+P+ T ++++ + ++AG+
Sbjct: 606 MKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGR 665
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVL-WCLCQRLHVGAAS------------------- 253
+ +A Q++ + G + ++ + +L + +GA +
Sbjct: 666 LDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDN 725
Query: 254 -SLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
L N +K + YN ++ G K G+++E +++ +++V G PD
Sbjct: 726 NCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK---------- 775
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
A +++I +Y +D C+++ K + P+
Sbjct: 776 --------------------------AISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSF 809
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+Y +I GL +V +A ++ +++ + +T +E L
Sbjct: 810 ASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFL 854
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 187/425 (44%), Gaps = 36/425 (8%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA- 217
V +V SY + ++ LG+ F+ +L M EG PD+ T ++++ AG+V A
Sbjct: 247 VKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAK 306
Query: 218 ------------------IQMLGRLEDFG-----------LKFDAESLNVVLW-----CL 243
I +L + D G +K D + NVV + L
Sbjct: 307 DVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDAL 366
Query: 244 CQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
CQ V AS +F+ MK K + +YN +ISG+ K ++ + + G +P+
Sbjct: 367 CQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNG 426
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
T+ I G++G AI+ ++ MK KG PD A NAV+ + G + +
Sbjct: 427 YTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHE 486
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
+ S P+ TYT +I K+ +A++VF EM++ VP + S ++ L G
Sbjct: 487 LKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGR 546
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
+ A ++ + +++ + Y LL L GK ++ L EM + YP + Y
Sbjct: 547 GNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNT 606
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
V+ LC G++ A+ ++ KG P Y+ + L+ ++L A+ +F ++K
Sbjct: 607 VLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKVL 666
Query: 543 QNDYA 547
DY
Sbjct: 667 APDYT 671
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 166/365 (45%), Gaps = 34/365 (9%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+ SYN ++ L D + S+M + G +PD T ++++D+ ++
Sbjct: 772 VSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSM------ 825
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWS 278
R+ED LK E +H S + +TYN +ISG
Sbjct: 826 ----RIEDM-LKVQKE------------MHCKGYESTY-----------VTYNTIISGLV 857
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
K + E + ++++EGFSP T+ L++GL + G+I+DA ++FD M + GC P+
Sbjct: 858 KSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRA 917
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
YN +++ Y G+ ++ + ++ M P++ +YT LI L + ++ D+L F ++
Sbjct: 918 IYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQL 977
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+ G+ P T + L G A+ ++ K G +L Y L+ L GK
Sbjct: 978 TELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKA 1037
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
++ E+ ++G+ + Y +I G G +NA + + G P+ Y +L
Sbjct: 1038 AEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQL 1097
Query: 519 SNKLL 523
N+LL
Sbjct: 1098 PNQLL 1102
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 182/389 (46%), Gaps = 1/389 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
I P D S++ +++ + +R + ++A + D LS ++ ++ +
Sbjct: 697 ILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKK 756
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNI 272
+A +++ + E G+ S N ++ L + A LF+ MK + TYN+
Sbjct: 757 ALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNL 816
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
++ K ++ +M +V KE+ +G+ +T++ +I GL ++ + +A++++ + +G
Sbjct: 817 ILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEG 876
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P Y ++ + G ++ + M Y C+PN Y L++G +
Sbjct: 877 FSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVC 936
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
E+F+ M+D+GI P + T + LC+ G + ++ +++ ++G + L Y LL+ L
Sbjct: 937 ELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGL 996
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G+ + L+++M++SG + Y +I L G+ A + EE L+ G+ P+
Sbjct: 997 GRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNV 1056
Query: 513 LVYSKLSNKLLASNKLESAYNLFRKIKIA 541
Y+ L S ++A+ + ++ +
Sbjct: 1057 FTYNALIGGYSVSGSTDNAFASYGQMIVG 1085
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 180/397 (45%), Gaps = 5/397 (1%)
Query: 145 AMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIV 204
A+ + +N +K D+ SYN + L + + M K+ + PD TL +
Sbjct: 620 ALGMLYNMTMK--GCMPDLSSYNTALHGLVKEDRLTEAFRIFCQM-KKVLAPDYTTLCTI 676
Query: 205 MDSFIRAGQVYKAIQMLGR-LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GK 262
+ SF++ G + +A+ L + G K D S + ++ + +R + + ++ +
Sbjct: 677 LPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSR 736
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+L + + +I K + +E ++K+ + G S + +++ LI GL ID A
Sbjct: 737 ILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAE 796
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+F MK GC PD YN ++ ++ +K K M E TY +ISGL
Sbjct: 797 GLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGL 856
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+KS+ + +A++++ +++ G P+ T L+ L G A ++ + GCK +
Sbjct: 857 VKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNR 916
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y +LL G + +L+ M + G D + Y +I LC G+L +++ +
Sbjct: 917 AIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQ 976
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G P + Y+ L + L S +LE A +LF ++
Sbjct: 977 LTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDME 1013
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 104/469 (22%), Positives = 194/469 (41%), Gaps = 53/469 (11%)
Query: 110 LKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVI 169
+K KG++ D + V SL G++ G A +F +K V D +Y ++
Sbjct: 452 MKSKGIVPDVVAGNAVLYSLAKSGRL-------GMAKRVFHE--LKSIGVCPDNITYTMM 502
Query: 170 VKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGL 229
+K + D V S+M + PD+ ++ ++D+ +AG+ +A ++ L++ L
Sbjct: 503 IKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNL 562
Query: 230 KFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMER 288
+ N +L L + V L M N++TYN V+ K G+V
Sbjct: 563 DPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALG 622
Query: 289 VLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI 348
+L + +G PD +++ + GL + R+ +A +F MK K PD ++ +++
Sbjct: 623 MLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMK-KVLAPDYTTLCTILPSFV 681
Query: 349 SVGDFDECMKYYKGMSSYNCEPN------------------------------------- 371
G +E + K Y +P
Sbjct: 682 KNGLMNEALHTLK---EYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRIL 738
Query: 372 MDTY--TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
+D + + LI L KS+K +A E+ ++ G+ TG+ + + L A +
Sbjct: 739 LDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGL 798
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ + +++GC Y L+L + + +L + EM GY S Y +I+GL
Sbjct: 799 FSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVK 858
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
L A+ + + + +GF P+ Y L + LL K+E A +LF ++
Sbjct: 859 SKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEM 907
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 150/332 (45%), Gaps = 7/332 (2%)
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVM 268
A Q++K++ R+ ES N +L + V + +F+ M+ +++ NV
Sbjct: 94 EALQLFKSVAQQPRI-----VHTTESCNYMLELMRAHGRVRDMAQVFDLMQRQIVKANVG 148
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
T+ + G + L + G +S T++ LI L ++G +A+EV+ M
Sbjct: 149 TFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVM 208
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
G P Y+ ++ + D + + + M + +PN+ +YT I L ++ +
Sbjct: 209 ATDGIVPSVRTYSVLMLAF-GKRDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRF 267
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A ++ ++M D G P T T ++ LC G A ++ K + K Y L
Sbjct: 268 EEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITL 327
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
L + G ++++W+ M+ GY + Y V+ LC +G+++ A V ++ +KG
Sbjct: 328 LDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGI 387
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
P + Y+ L + L +++L A LF + I
Sbjct: 388 EPQQYSYNSLISGFLKADRLNHALELFNHMNI 419
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 175/401 (43%), Gaps = 9/401 (2%)
Query: 143 GEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
EA+ LF + A + P + +S N +++ + M V M ++ V ++ T
Sbjct: 93 AEALQLFKSVA-QQPRIVHTTESCNYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTFL 151
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK 262
+ S G + A L +++ G+ ++ + N +++ L + + A ++ M
Sbjct: 152 TIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATD 211
Query: 263 -VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
++ +V TY++++ + K V + +L+E+ G P+ +++ I LG+AGR ++A
Sbjct: 212 GIVPSVRTYSVLMLAFGKR-DVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEA 270
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
++ M+++GC PD +I G + + M + + +P+ TY L+
Sbjct: 271 YKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDK 330
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
+ +E++ M G + T+ ++ LC G A ++ + ++ G +
Sbjct: 331 CGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQ 390
Query: 442 LTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+Y L +SGF K L L+L++ M G +G Y I G+ A+
Sbjct: 391 QYSYNSL---ISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIK 447
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
E KG P + + + L S +L A +F ++K
Sbjct: 448 RYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELK 488
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 106/245 (43%), Gaps = 11/245 (4%)
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
++++E + GR+ D +VFD M+ + + + + + G M
Sbjct: 116 NYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKE 175
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
N TY LI L+KS +A+EV++ M GIVPS T + + ++G
Sbjct: 176 AGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLM---LAFGKRDV 232
Query: 426 AMMMY--KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
+++ ++ G K ++ +Y + +R L G+ + +M++ G D +
Sbjct: 233 ETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVL 292
Query: 484 IAGLCNIGQLENAVLV---MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
I LC+ G++ +A V M+ S +K P R+ Y L +K + S ++ +K
Sbjct: 293 IQILCDAGRVSDAKDVFWKMKASDQK---PDRVTYITLLDKCGDNGDSRSVIEIWNAMKA 349
Query: 541 ARQND 545
ND
Sbjct: 350 DGYND 354
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 170/365 (46%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ +V +VK++N+++ L + D + M + DL T S ++ G
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGN 305
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
V KA + L + D + N +L C+ + + L+ M+ + N+++YNI+
Sbjct: 306 VDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIVSYNIL 365
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
I G + G++ E + + + A+G++ D+ T+ I GL G ++ A+ V ++ KG
Sbjct: 366 IKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGG 425
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
D AY ++I +E K MS + E N LI GL++ +++DA
Sbjct: 426 HLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASL 485
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+ M G +P+ + + LC G A K+ + G K L Y +LL L
Sbjct: 486 LMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLC 545
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
K + L+LWH+ +SG D ++ +I GLC++G+L++A+ VM + + +
Sbjct: 546 RDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLV 605
Query: 514 VYSKL 518
Y+ L
Sbjct: 606 TYNTL 610
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 180/432 (41%), Gaps = 39/432 (9%)
Query: 145 AMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIV 204
A F+ A +HP A Y+ I++ L + + ++ + + D + V
Sbjct: 25 AAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGRIVELIRSQECKCDEDVALSV 84
Query: 205 MDSFIRAGQVYKAIQMLGRL-EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GK 262
+ ++ + +A+ + R+ E FG + S N +L + SLF +
Sbjct: 85 IKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAG 144
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
V N+ TYN++I K + + L + EGF PD ++S +I L + G++DDA+
Sbjct: 145 VAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDAL 204
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYI---------------------------------- 348
E+FD M E+ PD YN +I ++
Sbjct: 205 ELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISG 264
Query: 349 --SVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPS 406
G D+C+K + M E ++ TY+ LI GL V A VF E+++R
Sbjct: 265 LSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFID 324
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
T + L C G ++ +++ + +++ +Y +L++ L GK +W
Sbjct: 325 VVTYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYNILIKGLLENGKIDEATMIWR 383
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
M GY +D Y I GLC G + A+ VM+E KG Y+ + + L
Sbjct: 384 LMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKR 443
Query: 527 KLESAYNLFRKI 538
+LE A NL +++
Sbjct: 444 RLEEASNLVKEM 455
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 182/375 (48%), Gaps = 3/375 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG-VNPDLETLSIVMDSFIRAGQVYKA 217
VA DV YN+++ + K + + ++ V P+++T +I++ + G+V
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG 276
+++ R++ + D + + ++ LC +V A S+FN + + K +V+TYN ++ G
Sbjct: 275 LKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGG 334
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ + G++ E + + I+ + S + ++++ LI+GL G+ID+A ++ M KG D
Sbjct: 335 FCRCGKIKESLELWR-IMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAAD 393
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y I G ++ + + + S ++ Y +I L K R++ +A + +
Sbjct: 394 NTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVK 453
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
EM G+ ++ + + L A ++ + K GC ++ +Y +L+ L G
Sbjct: 454 EMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAG 513
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
K G EM E+G D + Y ++ GLC ++E A+ + + L+ G P ++++
Sbjct: 514 KFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHN 573
Query: 517 KLSNKLLASNKLESA 531
L + L + KL+ A
Sbjct: 574 ILIHGLCSVGKLDDA 588
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 138/335 (41%), Gaps = 36/335 (10%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
W I + ++ SYN+++K L D + M +G D T I +
Sbjct: 348 WRIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVN 407
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM------------ 259
G V KA+ ++ +E G D + ++ CLC++ + AS+L M
Sbjct: 408 GYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVC 467
Query: 260 ------------------------KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
K L V++YNI+I G + G+ E +KE++
Sbjct: 468 NALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLE 527
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
G PD T+S L+ GL R +I+ A+E++ + G PD +N +I SVG D+
Sbjct: 528 NGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDD 587
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
M M NC N+ TY L+ G K R A ++ M G+ P + + L+
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILK 647
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
LC A+ + AR G ++ + +L+R
Sbjct: 648 GLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVR 682
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 70/170 (41%), Gaps = 1/170 (0%)
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
Y ++ L ++R V + E + + S ++ P A+ ++K+
Sbjct: 45 VYHHILRRLSEARMVTHVGRIVELIRSQECKCDEDVALSVIKTYGKNSMPDRALDVFKRM 104
Query: 434 RKV-GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
R++ GC+ + +Y LL + + L+ + +G + + Y +I C +
Sbjct: 105 REIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKE 164
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
E A + ++GF P YS + N L + KL+ A LF ++ R
Sbjct: 165 FEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERR 214
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 174/371 (46%), Gaps = 7/371 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+Y ++ LG++ + + ++ +M K G +P+++ + V+D+ +A+ +L ++
Sbjct: 1050 TYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQM 1109
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASS-LFNSMKGKVLFNVMTYNIVISGWSKLGQV 283
G D + N ++ LC HV A L +++ ++ N ++Y +I G+ G++
Sbjct: 1110 FASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGEL 1169
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ +L E++ G +PD +TF LI GL AG++ +A+ V + M E+ PD N YN +
Sbjct: 1170 MVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVL 1229
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
IS + M N +P+ Y LI G ++S + DA ++FE M +G+
Sbjct: 1230 ISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGV 1289
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML-- 461
P + + ++ C +G A++ RKVGC Y + +SG+ K G L
Sbjct: 1290 CPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTV---ISGYAKQGNLNG 1346
Query: 462 -LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L +M + + Y +I G C G ++A + + P+ + Y+ L
Sbjct: 1347 ALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIG 1406
Query: 521 KLLASNKLESA 531
L +K+ A
Sbjct: 1407 SLFKKDKVLRA 1417
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 162/394 (41%), Gaps = 37/394 (9%)
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL-EDFGLKFDAESLN 237
FD + + L M+ G P L ++ ++ AG + KA +M R+ E +G + N
Sbjct: 888 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCN 947
Query: 238 VVLWCLCQRLHVGAASSLFNSMKGK----------------------------------- 262
+L L ++ A L++ M GK
Sbjct: 948 RLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGA 1007
Query: 263 -VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
+ +V+ YN++I G+ + G + +L E+ GF P +T+ LI LG+ G ++
Sbjct: 1008 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKI 1067
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+F M+++G P+ YN+VI + + M K M + C+P++ T+ LI+G
Sbjct: 1068 GSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITG 1127
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
L V A E + R + P+ + T + C G A + + G
Sbjct: 1128 LCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPD 1187
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ + L+ L GK L + +M E D IY +I+GLC L A ++E
Sbjct: 1188 VVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILE 1247
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
E L K P VY+ L + + S L A +F
Sbjct: 1248 EMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 1281
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 168/407 (41%), Gaps = 62/407 (15%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L ++ G+G D + + L V GKV EA+++ + V DV
Sbjct: 1175 LLVEMMGRGHTPDVVTFGALIHGLVVAGKV-------SEALIV--REKMTERQVFPDVNI 1225
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YNV++ L +++ N+L +M ++ V PD + ++D FIR+
Sbjct: 1226 YNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSE------------- 1272
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV 284
++G A +F M+ K V ++++ N +I G+ + G +
Sbjct: 1273 ----------------------NLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMS 1310
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E + + G PD T++ +I G + G ++ A+ M ++ C P+ Y+++I
Sbjct: 1311 EAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLI 1370
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ Y GD D + M + PN+ TYT LI L K KV A FE ML
Sbjct: 1371 NGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCS 1430
Query: 405 PSTGTITSFLEPLCSYGP---------------PHAAMMMYKK-ARKVGCKLSLTAYKLL 448
P+ T+ + L S P A ++++KK +G + +AY +
Sbjct: 1431 PNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRN-SAYNAI 1489
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
+ L LD + M + GY + + ++ G C++G+ N
Sbjct: 1490 IFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVN 1536
>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
Length = 332
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 160/338 (47%), Gaps = 47/338 (13%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFG----------LKFDAESLNV 238
M + G P++ T + +M+S R G+V +A+ ++ R+ + G +K D
Sbjct: 1 MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60
Query: 239 VLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
++ LC+ + A +LF M K +F NV+TYN +I + G+ + +++L+ ++ +
Sbjct: 61 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 120
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
+PD +TFS LI + ++ +A E++ M P T YN++I + D+
Sbjct: 121 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 180
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+ M+S C P++ T++ LI+G K+++V + +E+F EM RGIV +T T T+ +
Sbjct: 181 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 240
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
C G AA DL +EM G D
Sbjct: 241 CQVGDLDAAQ-----------------------------------DLLNEMISCGVAPDY 265
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
+ ++AGLC+ +L A ++E+ + CP RL++
Sbjct: 266 ITFHCMLAGLCSKKELRKAFAILEDLQKSEVCP-RLIF 302
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 134/297 (45%), Gaps = 40/297 (13%)
Query: 124 NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMC 183
+V +S +V ++ GN A LF + + +V +YN ++ + +
Sbjct: 54 DVVISTAIVDRLCKDGN-HINAQNLF--TEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 110
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
+L M ++ +NPD+ T S ++++F++ +V +A ++ +
Sbjct: 111 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEM------------------- 151
Query: 244 CQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
++ + +TYN +I G+ K +V + +R+L + ++G SPD +
Sbjct: 152 ---------------LRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVV 196
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
TFS LI G +A R+D+ +E+F M +G +T Y +I + VGD D M
Sbjct: 197 TFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 256
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
S P+ T+ +++GL +++ A + E++ + P + FL LCS+
Sbjct: 257 ISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEVCPR---LIFFLFSLCSF 310
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 121/283 (42%), Gaps = 45/283 (15%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL----------IEGLGRA 315
NV+T+N +++ + G+V+E ++ +V EG P+++ S + ++ L +
Sbjct: 9 NVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDRLCKD 68
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
G +A +F M EKG P+ YN +I ++ G + + + + M P++ T+
Sbjct: 69 GNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTF 128
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
+ LI+ +K RKV++A E+++EML I P+T T S ++ C A M
Sbjct: 129 SALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMAS 188
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
GC + + L I G C +++N
Sbjct: 189 KGCSPDVVTFSTL-----------------------------------INGYCKAKRVDN 213
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ + E R+G + + Y+ L + L++A +L ++
Sbjct: 214 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 256
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 228/496 (45%), Gaps = 30/496 (6%)
Query: 54 HVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGK 113
H+LKELS +S +SF V+ + + + +S+ +V + L+ V+L++
Sbjct: 93 HILKELS---LMSGKSSF--VFG-ALMTTYRLCNSNPSVYDILIR------VYLRE---- 136
Query: 114 GVIEDAL----------WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDV 163
G+I+D+L +N +V ++G VV G + V F + + DV
Sbjct: 137 GMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGE---DVSVWSFLKEMLKRKICPDV 193
Query: 164 KSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGR 223
++N+++ L F+ ++ M K G P + T + V+ + + G+ AI++L
Sbjct: 194 ATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 253
Query: 224 LEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQ 282
++ G+ D + N+++ LC+ + L M+ +++ N +TYN +I+G+S G+
Sbjct: 254 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 313
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V+ ++L E+++ G SP+ +TF+ LI+G G +A+++F M+ KG P +Y
Sbjct: 314 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 373
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
++ +FD +Y M TYT +I GL K+ + +A+ + EM G
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 433
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
I P T ++ + C G A + + +VG + Y L+ G +
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 493
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
++ M G+ D + ++ LC G++ A M G P+ + + L N
Sbjct: 494 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 553
Query: 523 LASNKLESAYNLFRKI 538
S + A+++F ++
Sbjct: 554 GNSGEGLKAFSVFDEM 569
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 170/398 (42%), Gaps = 41/398 (10%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HPN +YN ++ +L++M G++P+ T + ++D I G
Sbjct: 295 HPNEV----TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 350
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK------GKVLF---- 265
+A++M +E GL S V+L LC+ A + MK G++ +
Sbjct: 351 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 410
Query: 266 --------------------------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS 299
+++TY+ +I+G+ K+G+ + ++ I G S
Sbjct: 411 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 470
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P+ + +S LI R G + +AI +++ M +G D +N ++++ G E ++
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 530
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ M+S PN ++ LI+G S + A VF+EM G P+ T S L+ LC
Sbjct: 531 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
G A K V + Y LL + G + L+ EM + D
Sbjct: 591 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 650
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKG-FCPSRLVYS 516
Y +I+GLC G+ A+L +E+ +G P++++Y+
Sbjct: 651 YTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 688
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 177/417 (42%), Gaps = 19/417 (4%)
Query: 141 LSGEAMVLFFNWAIKHPNVAKD--VKSYNVIVKALGRRKFFDFMCNVLSDMAKEG----- 193
+ G+ + F W +K P + D V+ + L R + +D ++L +++
Sbjct: 48 VHGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSF 107
Query: 194 -----------VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWC 242
N + I++ ++R G + ++++ + +G + N +L
Sbjct: 108 VFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGS 167
Query: 243 LCQRLH-VGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
+ + V S L +K K+ +V T+NI+I+ G + +++++ G++P
Sbjct: 168 VVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPT 227
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+T++ ++ + GR AIE+ D MK KG D YN +I + + +
Sbjct: 228 IVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLR 287
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M PN TY LI+G KV A ++ EML G+ P+ T + ++ S G
Sbjct: 288 DMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG 347
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
A+ M+ G S +Y +LL L + + + M+ +G Y
Sbjct: 348 NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 407
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+I GLC G L+ AV+++ E + G P + YS L N + ++A + +I
Sbjct: 408 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 156/390 (40%), Gaps = 37/390 (9%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
+V +M K G +P T ++ + G + +A + L L D N +L +
Sbjct: 564 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 623
Query: 244 CQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG-FSPD 301
C+ ++ A SLF M + +L + TY +ISG + G+ V KE A G P+
Sbjct: 624 CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 683
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+ ++ ++G+ +AG+ I + M G PD NA+I Y +G ++
Sbjct: 684 KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLP 743
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M + N PN+ TY L+ G K + V+ + ++ ++ GI+P T S + +C
Sbjct: 744 EMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 803
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL----------------- 464
+ + K G ++ + +L+ + G+ DL
Sbjct: 804 MLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCD 863
Query: 465 ------------------WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
HEM + G + Y +I GLC +G ++ A +V EE +
Sbjct: 864 AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 923
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
CP + S + L K + A L R
Sbjct: 924 KICPPNVAESAMVRALAKCGKADEATLLLR 953
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 172/395 (43%), Gaps = 15/395 (3%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
++F + + D+ + N ++ R + ++L +M + P+L T +I++
Sbjct: 704 IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG 763
Query: 208 FIRAGQV------YKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+ + V Y++I + G L D K SL V+ C L +G +G
Sbjct: 764 YSKRKDVSTSFLLYRSIILNGILPD---KLTCHSL-VLGICESNMLEIGLKILKAFICRG 819
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
V + T+N++IS G++ ++K + + G S D T ++ L R R ++
Sbjct: 820 -VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 878
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN-CEPNMDTYTRLIS 380
V M ++G P++ Y +I+ VGD + M ++ C PN+ + ++
Sbjct: 879 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV-AESAMVR 937
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
L K K +A + ML +VP+ + T+ + C G A+ + G KL
Sbjct: 938 ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL 997
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG-LCNIGQLENAVLV 499
L +Y +L+ L G + +L+ EM+ G+ ++ Y+ +I G L A ++
Sbjct: 998 DLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADII 1057
Query: 500 MEESLRKGFCPS-RLVYSKLSNKLLASNKLESAYN 533
+++ L +GF S L N +A KL++ N
Sbjct: 1058 LKDLLARGFITSMSLSQDSHRNLKMAMEKLKALQN 1092
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 144/355 (40%), Gaps = 1/355 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M G PD+ T + ++D + R G++ K +L + + + + N++L +R
Sbjct: 710 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 769
Query: 249 VGAASSLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
V + L+ S+ +L + +T + ++ G + + ++LK + G D TF+
Sbjct: 770 VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNM 829
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI G I+ A ++ M G D + +A++S F E MS
Sbjct: 830 LISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 889
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
P Y LI+GL + + A V EEM+ I P ++ + L G A
Sbjct: 890 ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAT 949
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++ + K+ ++ ++ L+ G L+L M G D Y +I GL
Sbjct: 950 LLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
C G + A + EE GF + Y L LLA S ++ K +AR
Sbjct: 1010 CAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLAR 1064
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 105/274 (38%), Gaps = 35/274 (12%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V T N ++ K G+ V + LKE++ PD TF+ LI L G + + +
Sbjct: 157 SVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLM 216
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
M++ G P YN V+ Y G F ++ M S + ++ TY LI L +S
Sbjct: 217 QKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRS 276
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
++A + +M R I P+ T Y
Sbjct: 277 NRIAKGYLLLRDMRKRMIHPNEVT-----------------------------------Y 301
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ S GK + L +EM G + + +I G + G + A+ +
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
KG PS + Y L + L + + + A + ++K
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 1/178 (0%)
Query: 363 MSSYN-CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M++Y C N Y LI L+ + D+LE+F M G PS T + L + G
Sbjct: 113 MTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG 172
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
+ K+ K + + +L+ L G L +M++SGY Y
Sbjct: 173 EDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYN 232
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
V+ C G+ + A+ +++ KG Y+ L + L SN++ Y L R ++
Sbjct: 233 TVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 290
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 177/387 (45%), Gaps = 11/387 (2%)
Query: 144 EAMVLFFNWAIKHPNVAK---DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
E +L F W++ + +A D + ++V+ LGR + + + D+
Sbjct: 165 EKALLLFEWSVLNLGIANEKIDRHAIELMVRILGRESQHTVASKLFDVIPLDDYVLDVRA 224
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA----SSLF 256
+ ++ ++ R G+ ++AI++ R+ + GL + NV+L + +G + L
Sbjct: 225 YTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGK---MGRSWDKILELL 281
Query: 257 NSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRA 315
+ M+ + L F+ T + V+S + G + E + +EG+ P ++T++ L+ G+A
Sbjct: 282 DEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKA 341
Query: 316 GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTY 375
G +A+ V M+E C PD YN V++ Y+ G +E M+S PN TY
Sbjct: 342 GIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTY 401
Query: 376 TRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARK 435
T +I+ + + ALE+F++M++ G VP+ T + L L M + +
Sbjct: 402 TTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKL 461
Query: 436 VGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLEN 495
GC + + +L G + ++ EM+ G+ D + + +I+ G +
Sbjct: 462 NGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNND 521
Query: 496 AVLVMEESLRKGFCPSRLVYSKLSNKL 522
A + EE ++ GF P Y+ L N L
Sbjct: 522 AAKMHEEMIKAGFSPCINTYNALLNAL 548
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 189/432 (43%), Gaps = 29/432 (6%)
Query: 106 FLQKLKGKGVIEDAL----WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAK 161
L+ L G E AL W+V L+L + + ++R + E MV +H +K
Sbjct: 154 LLKALDYSGNWEKALLLFEWSV---LNLGIANEKIDRHAI--ELMVRILGRESQHTVASK 208
Query: 162 ------------DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
DV++Y I+ A R + + M + G++P L T ++++D +
Sbjct: 209 LFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYG 268
Query: 210 RAGQVY-KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNV 267
+ G+ + K +++L + GL FD + + VL + + A F+ +K +
Sbjct: 269 KMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGT 328
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TYN ++ + K G E VL E+ PD++T++ ++ RAG ++ V D
Sbjct: 329 VTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDA 388
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M KG P+ Y +I+ Y VGD D+ ++ + M C PN+ TY ++ L K
Sbjct: 389 MASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSL 448
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +++ M G P+ T + L G ++++ + G + +
Sbjct: 449 SEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNT 508
Query: 448 LLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
L+ S +G+CG D + EM ++G+ Y ++ L G + A V+ +
Sbjct: 509 LI---SAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMR 565
Query: 505 RKGFCPSRLVYS 516
KGF PS YS
Sbjct: 566 NKGFRPSETSYS 577
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 150/395 (37%), Gaps = 36/395 (9%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N D +YN +V A R F + V+ MA +G+ P+ T + +++++ R G + KA
Sbjct: 358 NCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKA 417
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK------GKVLFNVM--- 268
++M ++ + G + + N VL L ++ + MK + +N M
Sbjct: 418 LEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAM 477
Query: 269 ---------------------------TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
T+N +IS + + G + ++ +E++ GFSP
Sbjct: 478 CGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPC 537
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
T++ L+ L R G A V M+ KG P +Y+ ++ +Y G+ K
Sbjct: 538 INTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEK 597
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
+ + P+ L+ K R + F+ + G P S L
Sbjct: 598 SIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNN 657
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
A M + G + L + L+ + G C ++ +Q SG D Y
Sbjct: 658 MYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYN 717
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
VI G C G ++ + ++ E G P Y+
Sbjct: 718 TVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYN 752
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 38/275 (13%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ +YN ++ AL RR + +V+ DM +G P + S+++ S+ + G V K I+M+
Sbjct: 538 INTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNV-KGIEMIE 596
Query: 223 R------------------------------------LEDFGLKFDAESLNVVLWCLCQR 246
+ L+ G K D N +L +
Sbjct: 597 KSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKN 656
Query: 247 LHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
A + + L +++T+N ++ +++ G + E VL+ + G PD +++
Sbjct: 657 NMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSY 716
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ +I+G R G + + I + M G GP YN IS Y + G F E M
Sbjct: 717 NTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIV 776
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+NC PN TY + G K+R+ +A++ ++ D
Sbjct: 777 HNCRPNELTYKIVADGYCKARRYDEAIDFVSKIKD 811
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/293 (18%), Positives = 116/293 (39%), Gaps = 36/293 (12%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++N ++ G++ ++ V +M G PD +T + ++ ++ R G A +M +
Sbjct: 470 TWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEM 529
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMT-YNIVISGWSKLGQV 283
G + N +L L +R AA S+ M+ K T Y++++ ++K G V
Sbjct: 530 IKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNV 589
Query: 284 -----------------------------------VEMERVLKEIVAEGFSPDSLTFSFL 308
MER + + G+ PD + + +
Sbjct: 590 KGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSM 649
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
+ + D A E+ + + G PD +N+++ Y GD + + + + +
Sbjct: 650 LSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGG 709
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
+P++ +Y +I G + + + + + EM G+ P T +F+ + G
Sbjct: 710 KPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQG 762
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 155/343 (45%), Gaps = 34/343 (9%)
Query: 193 GVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAA 252
G PD+ + S V++ + G++ K ++++ ++ GLK
Sbjct: 5 GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKP--------------------- 43
Query: 253 SSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
N+ TYN +I K G+V + ERVL+E++ +G PD++ ++ LI+G
Sbjct: 44 -------------NLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGF 90
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
+ G I A ++FD M+++ PD AY AVI G E K + M S EP+
Sbjct: 91 CKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDE 150
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
TYT LI G KS ++ A + +M+ G+ P+ T T+ + LC G A + +
Sbjct: 151 VTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHE 210
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
G +L++ Y L+ L G + L EM+ +G D + ++ C G+
Sbjct: 211 MCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGE 270
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ A ++ E L +G P+ + ++ L N S LE L
Sbjct: 271 MVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLL 313
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 136/273 (49%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V++Y+ VI+G+ G++ ++ ++++E+ +G P+ T++ +I L ++G++DDA V
Sbjct: 9 DVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVL 68
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
M +G PDT Y +I + +G+ K + M P+ YT +I GL +
Sbjct: 69 REMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRC 128
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
K+ +A +VF +M RG+ P T T+ ++ C G A ++ + + G ++ Y
Sbjct: 129 GKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTY 188
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L L G+ +L HEM G + Y ++ GLC G + AV +MEE
Sbjct: 189 TALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEV 248
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P + ++ L + + ++ A+ L R++
Sbjct: 249 AGMYPDTITFTTLMDAYCKTGEMVKAHELLREM 281
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 185/414 (44%), Gaps = 4/414 (0%)
Query: 130 DVVG--KVVNRGNLSGEAM-VLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVL 186
DVV V+N L GE VL ++ + ++ +YN I+ L + D VL
Sbjct: 9 DVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVL 68
Query: 187 SDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQR 246
+M +G+ PD + ++D F + G + A ++ +E + D + V+ LC+
Sbjct: 69 REMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRC 128
Query: 247 LHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
+ A +FN M + V + +TY +I G+ K G++ + + ++V G +P+ +T+
Sbjct: 129 GKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTY 188
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ L +GL + G++D A E+ M KG + YN++++ G+ + +K + M
Sbjct: 189 TALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEV 248
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
P+ T+T L+ K+ ++ A E+ EMLDRG+ P+ T + C G
Sbjct: 249 AGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLED 308
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
+ + G + T Y L+++ +++ M G D Y +I
Sbjct: 309 GERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIK 368
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G C ++ A + +E KGF + Y+ + K+ A LF +++
Sbjct: 369 GHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMR 422
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 164/356 (46%), Gaps = 1/356 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ + D +Y ++ L R V + M GV PD T + ++D + ++G+
Sbjct: 106 MEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGE 165
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNI 272
+ KA + ++ GL + + + LC+ V A+ L + M GK L N+ TYN
Sbjct: 166 MEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNS 225
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+++G K G + + ++++E+ G PD++TF+ L++ + G + A E+ M ++G
Sbjct: 226 LVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRG 285
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P +N +++ + G ++ + M PN TY L+ +
Sbjct: 286 LQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTT 345
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
E+++ M RG++P + T ++ C A ++K+ + G L+ ++Y +++
Sbjct: 346 EIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGF 405
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
K +L+ EM+ G +D EIY + G +E A+ + +E++ F
Sbjct: 406 FKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIENCF 461
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 173/400 (43%), Gaps = 10/400 (2%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D Y ++ + + +M K+ + PD + V+ R G++ +A
Sbjct: 76 IVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEAD 135
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ ++ G++ D + ++ C+ + A SL N M + + NV+TY + G
Sbjct: 136 KVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGL 195
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
KLGQV +L E+ +G + T++ L+ GL ++G I A+++ + M+ G PDT
Sbjct: 196 CKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDT 255
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
+ ++ Y G+ + + + M +P + T+ L++G S + D +
Sbjct: 256 ITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAW 315
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
ML++GI+P+T T S ++ C +YK G Y +L++ G K
Sbjct: 316 MLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIK---GHCK 372
Query: 458 CGMLLDLW---HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+ + W EM E G+ Y +I G ++ A + EE R+G +
Sbjct: 373 ARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEI 432
Query: 515 YSKLSNKLLASNKLESAYNLFRKIKIARQNDYARRLWRSK 554
Y+ + +E+A L + A +N + R+ + K
Sbjct: 433 YNLFVDISYGEGNMETALELCDE---AIENCFLNRIKKEK 469
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 108/214 (50%), Gaps = 6/214 (2%)
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
MK +G PD +Y+ VI+ Y G+ + +K + M +PN+ TY +I L KS K
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
V DA V EM+++GIVP T T+ ++ C G AA ++ + K AY
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 448 LLRRLSGFGKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
+ + G +CG +++ ++++M G D Y +I G C G++E A + + +
Sbjct: 121 V---ICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMV 177
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ G P+ + Y+ L++ L ++++A L ++
Sbjct: 178 QSGLTPNVVTYTALADGLCKLGQVDTANELLHEM 211
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%)
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
G+ +L L EMQ G + Y +I LC G++++A V+ E + +G P +VY
Sbjct: 24 GELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVY 83
Query: 516 SKLSNKLLASNKLESAYNLFRKIKIAR 542
+ L + +++AY LF +++ R
Sbjct: 84 TTLIDGFCKLGNIQAAYKLFDEMEKQR 110
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 170/382 (44%), Gaps = 2/382 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V D +N ++ A R D + DM K+GVNPD+ T S V+ +F R G++ A+
Sbjct: 395 VVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAM 454
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVISG 276
+ + D G+ D + ++ C R + A L + M KG + + +I+
Sbjct: 455 EKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINN 514
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K G+V E + V+ I+ G P+ +TF+ L++G G + +A+ + D+M+ G PD
Sbjct: 515 LCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPD 574
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN ++ Y G D+ + ++ M +Y ++ GL ++R+ A E+F
Sbjct: 575 IYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFH 634
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
EM++ G+ S T + L LC A M+ +K + K + + +++R + G
Sbjct: 635 EMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVG 694
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ +L+ + G Y +I L E+A + + P + +
Sbjct: 695 RRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILN 754
Query: 517 KLSNKLLASNKLESAYNLFRKI 538
++ LL ++ A N KI
Sbjct: 755 EIIRMLLNKGEVAKAGNYLSKI 776
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 176/390 (45%), Gaps = 4/390 (1%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
+ ++ + +V +Y+ ++ L + K D VL M GV P+ T + ++ + +
Sbjct: 248 YKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTS 307
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMT 269
G +++++ + L D + N + LC+ + A +F+SM KG +V++
Sbjct: 308 GMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKP-DVIS 366
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
Y ++ G++ G + M+ + +V EG PD F+ LI R G +D ++ +F+ M
Sbjct: 367 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 426
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
++G PD ++ VIS + +G D+ M+ + M P+ Y+ LI G R +
Sbjct: 427 KQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLV 486
Query: 390 DALEVFEEMLDRGIVPST-GTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A E+ +ML +GI P TS + LC G + G + +L + L
Sbjct: 487 KAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSL 546
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ G + L M+ G D Y ++ G C G++++A+ + + L K
Sbjct: 547 VDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRV 606
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ + Y+ + + L + + A +F ++
Sbjct: 607 TLTSVSYNIILHGLFQARRTIVAKEMFHEM 636
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 181/419 (43%), Gaps = 37/419 (8%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
P A + +YN+++ R + D V + + G+ PD+ + + ++D F + G+V K
Sbjct: 183 PEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDK 242
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVIS 275
A + ++E+ G+ + + + ++ LC+ + A + M G V N MTYN +I
Sbjct: 243 AHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIH 302
Query: 276 GWSKLGQVVEMERVLKE-----------------------------------IVAEGFSP 300
G+S G E RV KE +V +G P
Sbjct: 303 GYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKP 362
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
D +++ L+ G AG I +F+ M +G PD + +N +I+ Y +G D+ + +
Sbjct: 363 DVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMF 422
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
+ M+ P++ T++ +IS + ++ DA+E F M+D G+ P T + ++ C+
Sbjct: 423 EDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR 482
Query: 421 GPPHAAMMMYKKARKVGCKLS-LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
A + G + + ++ L G+ D+ + +G +
Sbjct: 483 RDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLIT 542
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ ++ G C +G ++ AV +++ G P Y+ L + +++ A LFR +
Sbjct: 543 FNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDM 601
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 118/287 (41%), Gaps = 35/287 (12%)
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
VE+ + + +P T++ LI RA R D + VF + G GPD +YNA+
Sbjct: 171 VELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNAL 230
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I + G+ D+ + M PN+ TY+ LI+GL K++++ A V +M+ G+
Sbjct: 231 IDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGV 290
Query: 404 -----------------------------------VPSTGTITSFLEPLCSYGPPHAAMM 428
VP G SF+ LC +G A
Sbjct: 291 RPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARD 350
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++ G K + +Y LL + G + +L++ M G D ++ +I
Sbjct: 351 IFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYA 410
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+G ++ ++L+ E+ ++G P + +S + + +L+ A F
Sbjct: 411 RLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKF 457
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 120/275 (43%), Gaps = 1/275 (0%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
+V+ + G P+L T + ++D + G + +A+ +L +E G++ D + N ++
Sbjct: 526 DVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGY 585
Query: 244 CQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C+ + A +LF M K V ++YNI++ G + + + + + E++ G +
Sbjct: 586 CKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSI 645
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
T++ ++ GL R D+A + + + D +N VI VG E + +
Sbjct: 646 HTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAA 705
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
+S+Y P + TY +I+ L+K DA +F M P + + + L + G
Sbjct: 706 ISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGE 765
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
A K K G T LL+ S GK
Sbjct: 766 VAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGK 800
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 91/236 (38%), Gaps = 36/236 (15%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF + + H V SYN+I+ L + + + +M + G+ + T +
Sbjct: 593 DALTLFRD--MLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYAT 650
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
V+ R +A +L +L +KFD +
Sbjct: 651 VLGGLCRNNCTDEANMLLEKLFSMNVKFDILT---------------------------- 682
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
+NIVI K+G+ E + + I G P LT+ +I L + +DA
Sbjct: 683 ------FNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADN 736
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
+F +M++ C PD+ N +I ++ G+ + Y + P T + LI
Sbjct: 737 LFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 792
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 72/154 (46%), Gaps = 5/154 (3%)
Query: 389 ADALEVFEEMLDRGIVPSTG-TITSFLEPLCSYGP---PHAAMMMYKKARKVGCKLSLTA 444
A A+E+F+ M DR P TI ++ + Y P + ++ + + G + +
Sbjct: 168 ALAVELFKRM-DRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFS 226
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y L+ S G+ DL+++M+E G + Y +I GLC +++ A V+ + +
Sbjct: 227 YNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMV 286
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G P+ + Y+ L + S + + +F+++
Sbjct: 287 GAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEM 320
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 14/173 (8%)
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA--------AMM 428
RL SG L DA +F+E+L R P+ + L + PP A A+
Sbjct: 116 RLRSGTLGPD---DARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVE 172
Query: 429 MYKKARKVGCK---LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
++K+ + C ++ Y +L+ + + L ++ + +G D Y +I
Sbjct: 173 LFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALID 232
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G G+++ A + + +G P+ + YS L N L + +++ A + R++
Sbjct: 233 GFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQM 285
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 176/393 (44%), Gaps = 2/393 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D + V+V+A R+ F + ++ M++ G P++ S +D G V +A +L
Sbjct: 215 DSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVL 274
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--NVMTYNIVISGWSK 279
+ GLK + + ++ LC+ + A LF + + NV TY ++I G+ K
Sbjct: 275 EEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCK 334
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G++ E +L +V +G +P++ T++ LI G + G D A E+ + MK +G P+
Sbjct: 335 EGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYT 394
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YNA+I + G E K + +S + TYT LI+ K + AL++F++M
Sbjct: 395 YNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMA 454
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
++ P T T+ + C + ++ K +G + Y ++ GK
Sbjct: 455 EKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLT 514
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
L ++ M + G D Y +I+ LC +LE A + E L K P + L+
Sbjct: 515 SALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLA 574
Query: 520 NKLLASNKLESAYNLFRKIKIARQNDYARRLWR 552
+ +K+ A + ++ +Q A L R
Sbjct: 575 YEYCRRDKITIAVSFLDRLDKRQQAHTADALVR 607
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 104/244 (42%), Gaps = 1/244 (0%)
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
A G PD +F L+ G R GR ++A + M +G D+ V+ + G F
Sbjct: 173 AAGGVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRF 232
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
++ MS PNM Y+ I GL + V A V EEM+ +G+ P+ T TS
Sbjct: 233 RNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSL 292
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGC-KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
++ LC G A ++ K K K ++ Y +++ GK L M E G
Sbjct: 293 IDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQG 352
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
+ Y +I G C G + A +M + +GF P+ Y+ + K++ AY
Sbjct: 353 LAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAY 412
Query: 533 NLFR 536
+ R
Sbjct: 413 KVLR 416
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 144/335 (42%), Gaps = 9/335 (2%)
Query: 211 AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA---ASSLFNSMK---GKVL 264
AG++ +A ML L GL E+ N VL + H G A F+ M G V
Sbjct: 121 AGRLREAADMLLELRSHGLPLVVETANWVLRVGLR--HPGCFAHAREAFDGMARAAGGVR 178
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+ ++ ++ G + G+ E + +L + A+GF DS T + ++ R GR + ++
Sbjct: 179 PDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDL 238
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F M E G P+ Y+A I G + + M +PN+ T+T LI GL K
Sbjct: 239 FRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCK 298
Query: 385 SRKVADALEVFEEML-DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
+ A +F +++ P+ T T + C G A M+ + + G +
Sbjct: 299 IGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTN 358
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
Y L+ G +L ++M+ G+ + Y +I G C G+++ A V+ +
Sbjct: 359 TYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMA 418
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+G ++ Y+ L + + A +LF+++
Sbjct: 419 TSQGLHLDKVTYTILITEHCKQGHITCALDLFKQM 453
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/355 (19%), Positives = 142/355 (40%), Gaps = 71/355 (20%)
Query: 115 VIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALG 174
+++ + + NV ++G G L+ M+L + +A + +Y ++
Sbjct: 312 LVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLL---GRMVEQGLAPNTNTYTTLIHGHC 368
Query: 175 RRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
+ FD +++ M EG P++ T + ++ F + G++ +A ++L GL D
Sbjct: 369 KGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKV 428
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGK--------------------------VLFNV- 267
+ +++ C++ H+ A LF M K LF+
Sbjct: 429 TYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKC 488
Query: 268 ---------MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
TY +I+G+ +LG++ +V + +V G PDS+T+ LI L + R+
Sbjct: 489 LSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRL 548
Query: 319 DDAIEVFDTMKEKGCGP--------------------------------DTNAYNAVISN 346
++A +F+TM +K P + +A++
Sbjct: 549 EEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKRQQAHTADALVRK 608
Query: 347 YISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+VG+ D + K + + + TYT I+ +S + A A E+ E++ R
Sbjct: 609 LSTVGNLDAASLFLKNVLDKHYAVDHATYTSFINSCYESNRYALASEISEKISKR 663
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 164/348 (47%), Gaps = 2/348 (0%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
P++E S ++D+ + V +A + + G+ D + + +++ C + A L
Sbjct: 197 PNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGL 256
Query: 256 FNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
N M K + NV TYNI++ K G+V E + VL ++ PD +T+S L++G
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFL 316
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
+ A VF+ M G PD + Y +I+ + DE + +K M N P + T
Sbjct: 317 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVT 376
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y+ LI GL KS ++ ++ +EM DRG T +S ++ LC G A+ ++ K +
Sbjct: 377 YSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMK 436
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
+ ++ + +LL L G+ +++ ++ GY + Y +I G C G LE
Sbjct: 437 DQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLE 496
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
A+ ++ + G P+ + + L ++ + A L R++ IAR
Sbjct: 497 EALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM-IAR 543
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 188/417 (45%), Gaps = 36/417 (8%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK-- 216
+ D+ + N+++ F +VL+ + K G PD TL+ ++ GQV K
Sbjct: 90 IQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKAL 149
Query: 217 ---------------------------------AIQMLGRLEDFGLKFDAESLNVVLWCL 243
AI++L +++ K + E + ++ L
Sbjct: 150 HFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDAL 209
Query: 244 CQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C+ V A LF+ M K + +V+TY+ +I G+ G++ E +L E+V + +P+
Sbjct: 210 CKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNV 269
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
T++ L++ L + G++ +A V M + PD Y+ ++ Y V + + +
Sbjct: 270 YTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNA 329
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
MS P++ TYT LI+G K++ V +AL +F+EM + +VP T +S ++ LC G
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
+ + R G + Y L+ L G + L+++M++ + +
Sbjct: 390 IPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTI 449
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ GLC G+L++A V ++ L KG+ + Y+ + N LE A + K++
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKME 506
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 172/412 (41%), Gaps = 36/412 (8%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ +N I+ + + K + ++ + +G+ PDL TL+I+++ F GQ+ +L
Sbjct: 59 IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAA-------------------SSLFNSM---- 259
++ G D +LN ++ LC + V A ++L N +
Sbjct: 119 KILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 178
Query: 260 --KGKVLF-----------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFS 306
+G + NV Y+ +I K V E + E+ +G S D +T+S
Sbjct: 179 DTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYS 238
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSY 366
LI G G++ +AI + + M K P+ YN ++ G E M
Sbjct: 239 TLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKA 298
Query: 367 NCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
+P++ TY+ L+ G +V A VF M G+ P T T + C A
Sbjct: 299 CVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEA 358
Query: 427 MMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAG 486
+ ++K+ + + Y L+ L G+ + DL EM++ G P+D Y +I G
Sbjct: 359 LNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDG 418
Query: 487 LCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
LC G L+ A+ + + + P+ ++ L + L +L+ A +F+ +
Sbjct: 419 LCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 136/275 (49%), Gaps = 3/275 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EA+ L +K N +V +YN++V AL + +VL+ M K V PD+ T S
Sbjct: 252 EAIGLLNEMVLKTIN--PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYST 309
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
+MD + +V KA + + G+ D + +++ C+ V A +LF M K
Sbjct: 310 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN 369
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
++ ++TY+ +I G K G++ + ++ E+ G D +T+S LI+GL + G +D AI
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAI 429
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+F+ MK++ P+ + ++ G + + ++ + + N+ TY +I+G
Sbjct: 430 ALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGH 489
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
K + +AL + +M D G +P+ T + + L
Sbjct: 490 CKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIAL 524
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 154/350 (44%), Gaps = 9/350 (2%)
Query: 195 NPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASS 254
P + + ++DSF + A+ + RLE G++ D +LN+++ C C H+G +
Sbjct: 56 TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFC---HMGQITF 112
Query: 255 LFNSMKGKVL-----FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
F S+ K+L + +T N +I G GQV + +++A+GF + ++++ LI
Sbjct: 113 GF-SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLI 171
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
G+ + G AI++ + + P+ Y+ +I E + M+
Sbjct: 172 NGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGIS 231
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
++ TY+ LI G K+ +A+ + EM+ + I P+ T ++ LC G A +
Sbjct: 232 ADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSV 291
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
K K + Y L+ + +++ M G D Y +I G C
Sbjct: 292 LAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK 351
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ A+ + +E +K P + YS L + L S ++ ++L +++
Sbjct: 352 NKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMR 401
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 107/206 (51%), Gaps = 1/206 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V DV +Y +++ + K D N+ +M ++ + P + T S ++D ++G++
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVW 394
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ + D G D + + ++ LC+ H+ A +LFN MK + + N+ T+ I++ G
Sbjct: 395 DLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGL 454
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G++ + + V ++++ +G+ + T++ +I G + G +++A+ + M++ GC P+
Sbjct: 455 CKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNA 514
Query: 338 NAYNAVISNYISVGDFDECMKYYKGM 363
+ +I + D+ K + M
Sbjct: 515 FTFETIIIALFKKDENDKAEKLLRQM 540
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/274 (18%), Positives = 114/274 (41%)
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFD 326
++ +N ++ ++K+ + + +G PD +T + LI G+I V
Sbjct: 59 IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 327 TMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR 386
+ ++G PDT N +I G + + ++ + + + N +Y LI+G+ K
Sbjct: 119 KILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 178
Query: 387 KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
A+++ ++ R P+ ++ ++ LC Y A ++ + G + Y
Sbjct: 179 DTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYS 238
Query: 447 LLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRK 506
L+ GK + L +EM + Y ++ LC G+++ A V+ L+
Sbjct: 239 TLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKA 298
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
P + YS L + +++ A ++F + +
Sbjct: 299 CVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL 332
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 90/227 (39%)
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
+DDA+ F+ M P +N ++ ++ + + + + +P++ T
Sbjct: 40 VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
LI+ ++ V ++L RG P T T+ + ++ LC G A+ + K G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
+L+ +Y L+ + G + L ++ + E+Y +I LC + A
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
+ E KG + YS L KL+ A L ++ + N
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTIN 266
>gi|255660866|gb|ACU25602.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 484
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 167/368 (45%), Gaps = 39/368 (10%)
Query: 142 SGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
+ E + FF W + + +++ I++ LGR + +L DM K+G+ D +
Sbjct: 24 TSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMW 83
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+++DS+ + G V ++++M ++E+ G++ +S N + + +R A FN M
Sbjct: 84 VMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKM-- 141
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
++EG P TF+ +I G +G+++ A
Sbjct: 142 --------------------------------LSEGIEPTRHTFNVMIWGFFLSGKVETA 169
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
F+ MK + PD YN +I+ Y V +E KY+ M N EP + TYT LI G
Sbjct: 170 NRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKG 229
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
+ +V DAL + EEM GI P+T T ++ L LC+ A ++ K+ + L+
Sbjct: 230 YVSVDQVDDALRLVEEMKGFGIKPNTITYSTLLPGLCNAEKMSEARVILKEM--MDKYLA 287
Query: 442 LTAYKLLLRRLSGFGKCG---MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
T + +R +S K G D+ M P++ Y +I C +GQ + AV
Sbjct: 288 PTDNSIFMRLISSHCKSGNPDAAADVLKAMIRLSVPTEAGHYGXLIXNFCKVGQYDKAVK 347
Query: 499 VMEESLRK 506
++++ + K
Sbjct: 348 LLDKLIEK 355
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 160/331 (48%), Gaps = 41/331 (12%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M +EG P +++ + G A+ +L ++E+ +K N ++ LC+ H
Sbjct: 36 MVEEGHQP----YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGH 91
Query: 249 VGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
A +LF M K +F +V+TY+ +I + + G+ + E++L++++ +PD +TFS
Sbjct: 92 HIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSA 151
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI L + G++ +A E++ M +G P T YN++I + ++ + M+S +
Sbjct: 152 LINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS 211
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
C P++ T++ LI+G K+++V + +E+F EM RGIV +T T T+ + C G AA
Sbjct: 212 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 271
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
DL + M SG + ++ ++A L
Sbjct: 272 -----------------------------------DLLNVMISSGVAPNYITFQSMLASL 296
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
C+ +L A ++E+ + CP R+V +K
Sbjct: 297 CSKKELRKAFAILEDLQKSEVCP-RIVQAKF 326
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 127/253 (50%), Gaps = 1/253 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ ++ V YN I+ L + N+ ++M +G+ PD+ T S ++DSF R+G+
Sbjct: 67 MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGR 126
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
A Q+L + + + D + + ++ L + V A ++ M + +F +TYN
Sbjct: 127 WTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNS 186
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G+ K ++ + +R+L + ++ SPD +TFS LI G +A R+D+ +E+F M +G
Sbjct: 187 MIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 246
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
+T Y +I + VGD D M S PN T+ +++ L +++ A
Sbjct: 247 IVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAF 306
Query: 393 EVFEEMLDRGIVP 405
+ E++ + P
Sbjct: 307 AILEDLQKSEVCP 319
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/347 (19%), Positives = 132/347 (38%), Gaps = 73/347 (21%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + G PD+ T + +M+ G+V +A+ ++ R+ + G +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ------------------ 42
Query: 249 VGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
Y +I+G K+G +L ++ + ++ +
Sbjct: 43 --------------------PYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAI 82
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I+ L + G A +F M +KG PD Y+ +I ++ G + + + + M
Sbjct: 83 IDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQI 142
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P++ T++ LI+ L+K KV++A E++ +ML RGI P+T T S ++ C + A
Sbjct: 143 NPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKR 202
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
M C + + L I G C
Sbjct: 203 MLDSMASKSCSPDVVTFSTL-----------------------------------INGYC 227
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+++N + + E R+G + + Y+ L + L++A +L
Sbjct: 228 KAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 274
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 70/181 (38%), Gaps = 40/181 (22%)
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
M C P++ T+T L++GL +V AL + + M++ G P GTI + LC G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPY-GTI---INGLCKMGD 56
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
+A L+L +M+E+ + IY
Sbjct: 57 TESA-----------------------------------LNLLSKMEETHIKAHVVIYNA 81
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+I LC G +A + E KG P + YS + + S + A L R + I R
Sbjct: 82 IIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDM-IER 140
Query: 543 Q 543
Q
Sbjct: 141 Q 141
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 155/314 (49%), Gaps = 5/314 (1%)
Query: 127 LSLDVVGKVVNRGNLSGEAMVLFFNWA-IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNV 185
L+ D + ++ N++ EA L + I H D ++N+ + L + + +CN+
Sbjct: 358 LACDTLLCCLSSKNMAREAGALLKKFGKIGH---KPDSATFNIAMNCLIKGFDLNEVCNI 414
Query: 186 LSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
L ++G+ T ++ + AG+V + ++ GL + S N+V+ C C+
Sbjct: 415 LDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCK 474
Query: 246 RLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
+ A++ F M+ K + N++T+N +I G+ K G++ + +L ++ GF PD T
Sbjct: 475 TSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFT 534
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
FS +I+GL RA +I+DA+ F M G P+ YN +I + +GD MK + M
Sbjct: 535 FSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQ 594
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
+ P++ ++ LI + KV DA ++F ML G++P T +F++ C G +
Sbjct: 595 TDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFN 654
Query: 425 AAMMMYKKARKVGC 438
A ++ GC
Sbjct: 655 EAKELFLSMEANGC 668
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 135/267 (50%), Gaps = 8/267 (2%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
+FN +K + +V SYN+++ + D N +M +G+ P+L T + ++D +
Sbjct: 449 YFNQMVKD-GLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGY 507
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--- 265
+ G++ K+ +L L + G K D + + ++ LC+ + A F+ M V++
Sbjct: 508 CKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEM---VMWGLS 564
Query: 266 -NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
N +TYNI+I +G V ++L+++ +G +PD +F+ LI+ R G+++DA ++
Sbjct: 565 PNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKL 624
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F +M G PD Y A I + G F+E + + M + C P+ T ++ L+K
Sbjct: 625 FSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVK 684
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTIT 411
+ A ++ + + GI+ + I+
Sbjct: 685 QDQFEAAQKIAKTCSEWGILVNFAAIS 711
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 163/415 (39%), Gaps = 38/415 (9%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
N D +YN+++ + R D ++ M G +P++ T +I++D F A +V +A
Sbjct: 247 NCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEA 306
Query: 218 IQMLGRLE----------------------------DFGLKFDAE-------SLNVVLWC 242
++L ++ + ++F + + +L C
Sbjct: 307 FRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCC 366
Query: 243 LCQRLHVGAASSLFNSMKGKVLF--NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSP 300
L + A +L GK+ + T+NI ++ K + E+ +L V +G
Sbjct: 367 LSSKNMAREAGALLKKF-GKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKF 425
Query: 301 DSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY 360
T+ LI+ L AG++ + F+ M + G + +YN VI + D+ +
Sbjct: 426 GFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTF 485
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSY 420
K M PN+ T+ LI G K ++ + ++ +L+ G P T +S ++ LC
Sbjct: 486 KEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRA 545
Query: 421 GPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIY 480
A+ + + G + Y +L+ L G + L +MQ G D +
Sbjct: 546 KQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSF 605
Query: 481 EYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+I C +G++E+A + L G P Y S + A LF
Sbjct: 606 NALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELF 660
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 136/317 (42%), Gaps = 1/317 (0%)
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS-MKGKVLFNVMTYNIVI 274
+A +L + G K D+ + N+ + CL + + ++ + ++ + F TY +I
Sbjct: 375 EAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALI 434
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+V E ++V +G + +++ +I+ + +D A F M+ KG
Sbjct: 435 KALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIP 494
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ +N +I Y G+ + + + +P++ T++ +I GL +++++ DAL
Sbjct: 495 PNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGC 554
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F EM+ G+ P+ T + LC G +M + +K + G + ++ L++
Sbjct: 555 FSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCR 614
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK L+ M G D Y I C G+ A + G P
Sbjct: 615 MGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFT 674
Query: 515 YSKLSNKLLASNKLESA 531
+ + + L+ ++ E+A
Sbjct: 675 CNIILDALVKQDQFEAA 691
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 73/155 (47%)
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
I+I W +LG + + +I G SP + ++ +I+ L ++ +D A F M
Sbjct: 187 ILIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSAD 246
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
C PD YN +I G DE ++ K M PN+ TYT LI G ++KV +A
Sbjct: 247 NCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEA 306
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAA 426
V E M R + PS TI SF+ + P+ A
Sbjct: 307 FRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKA 341
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/408 (20%), Positives = 160/408 (39%), Gaps = 36/408 (8%)
Query: 168 VIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDF 227
+++ + GR + + ++ G++P + V+D+ +++ + A ++
Sbjct: 187 ILIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSAD 246
Query: 228 GLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEM 286
K D + N+++ +C+ V A L M+G NV TY I+I G+ +V E
Sbjct: 247 NCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEA 306
Query: 287 ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV---------------FDTM--- 328
RVL+ + A SP T I G+ R + A E+ DT+
Sbjct: 307 FRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCC 366
Query: 329 -------KEKGC----------GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
+E G PD+ +N ++ I D +E +
Sbjct: 367 LSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFG 426
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
TY LI L + KV + F +M+ G++ + + ++ C A +K
Sbjct: 427 FSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFK 486
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ + G +L + L+ G+ DL + E G+ D + +I GLC
Sbjct: 487 EMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAK 546
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Q+E+A+ E + G P+ + Y+ L + L + + L RK++
Sbjct: 547 QIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQ 594
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%)
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G VV +LK+I A G+ + LI GR G E+F + G P T Y
Sbjct: 161 GPVVLSVELLKDIKASGYRINEELLCILIGSWGRLGLAKYCDEIFGQISFLGISPSTRLY 220
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
NAVI + D ++ MS+ NC+P+ TY LI G+ +S V +AL + ++M
Sbjct: 221 NAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEG 280
Query: 401 RGIVPSTGTITSFLE 415
G P+ T T ++
Sbjct: 281 LGYSPNVFTYTILID 295
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/370 (19%), Positives = 150/370 (40%), Gaps = 18/370 (4%)
Query: 177 KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESL 236
KF+ ++ N+ AK D ++ + R G V ++++L ++ G + + E L
Sbjct: 131 KFYIWVSNMDPLFAK-----DQSVKGVLANCLYRKGPVVLSVELLKDIKASGYRINEELL 185
Query: 237 NVVL--WCLCQRLHVGAASSLFNSMKGKVLF-----NVMTYNIVISGWSKLGQVVEMERV 289
+++ W RL + + + G++ F + YN VI K +
Sbjct: 186 CILIGSW---GRLGLAKYC---DEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLK 239
Query: 290 LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYIS 349
+++ A+ PD T++ LI G+ R+G +D+A+ + M+ G P+ Y +I + +
Sbjct: 240 FQQMSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFN 299
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
DE + + M + P+ T I G+ + A E+ E ++R V
Sbjct: 300 AKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLA 359
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
+ L L S A + KK K+G K + + + L + ++
Sbjct: 360 CDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFV 419
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
E G Y +I L G++ + ++ G + Y+ + + ++ ++
Sbjct: 420 EQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMD 479
Query: 530 SAYNLFRKIK 539
A N F++++
Sbjct: 480 KATNTFKEMQ 489
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,253,069,816
Number of Sequences: 23463169
Number of extensions: 338837083
Number of successful extensions: 1017755
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7082
Number of HSP's successfully gapped in prelim test: 4775
Number of HSP's that attempted gapping in prelim test: 856065
Number of HSP's gapped (non-prelim): 68497
length of query: 558
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 410
effective length of database: 8,886,646,355
effective search space: 3643525005550
effective search space used: 3643525005550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)