BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008633
(558 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C8R0|PP416_ARATH Putative pentatricopeptide repeat-containing protein At5g43820
OS=Arabidopsis thaliana GN=At5g43820 PE=3 SV=1
Length = 546
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/525 (59%), Positives = 401/525 (76%), Gaps = 9/525 (1%)
Query: 36 YNELL--SNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRIDSSRAVD 93
YN L +++ N +DE +VL ELS L ISS+ + + S N V A+D
Sbjct: 29 YNRTLCTASESLNHGVVDESYVLAELSSLLPISSNKTSVSKEDSSSKNQV-------AID 81
Query: 94 EFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWA 153
FL E++LRGVFLQKLKGK I+ +L ++ + LS+D+V V+NRGNLSGEAMV FF+WA
Sbjct: 82 SFLSAEDKLRGVFLQKLKGKSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWA 141
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ P V KDV SY+VI++ALGRRK F FM +VL M EGVNPDLE L+I MDSF+R
Sbjct: 142 VREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHY 201
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIV 273
V +AI++ E FG+K ES N +L CLC+R HV AA S+FN+ KG + F+ +YNI+
Sbjct: 202 VRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIM 261
Query: 274 ISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
ISGWSKLG+V EME+VLKE+V GF PD L++S LIEGLGR GRI+D++E+FD +K KG
Sbjct: 262 ISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGN 321
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
PD N YNA+I N+IS DFDE M+YY+ M CEPN++TY++L+SGL+K RKV+DALE
Sbjct: 322 VPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALE 381
Query: 394 VFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS 453
+FEEML RG++P+TG +TSFL+PLCSYGPPHAAM++Y+K+RK GC++S +AYKLLL+RLS
Sbjct: 382 IFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLS 441
Query: 454 GFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRL 513
FGKCGMLL++W EMQESGYPSD E+YEY++ GLC IG LENAVLVMEE++RKGFCP+R
Sbjct: 442 RFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRF 501
Query: 514 VYSKLSNKLLASNKLESAYNLFRKIKIARQNDYARRLWRSKGWHF 558
VYS+LS+KL+ASNK E AY LF KIK AR + AR WRS GWHF
Sbjct: 502 VYSRLSSKLMASNKTELAYKLFLKIKKARATENARSFWRSNGWHF 546
>sp|Q9LZP3|PP293_ARATH Pentatricopeptide repeat-containing protein At3g62470,
mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2
SV=1
Length = 599
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 204/404 (50%), Gaps = 1/404 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L + +DLS D++ +V+ R + + FF WA + A D ++YN ++ L +
Sbjct: 148 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAK 207
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ F+ M +VL +M +G+ +ET +I M +F A + KA+ + ++ + K E+
Sbjct: 208 TRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVET 266
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
+N +L L + A LF+ +K + N+MTY ++++GW ++ ++E R+ +++
Sbjct: 267 INCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 326
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+G PD + + ++EGL R+ + DAI++F MK KG P+ +Y +I ++ +
Sbjct: 327 QGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 386
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
++Y+ M +P+ YT LI+G +K+ E+ +EM ++G P T + ++
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
+ + P A +Y K + + S+ + ++++ M +W EM + G
Sbjct: 447 LMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICP 506
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
D Y +I GL G+ A +EE L KG + Y+K +
Sbjct: 507 DDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFA 550
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 141/319 (44%), Gaps = 2/319 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V++ N ++ +LGR K VL D KE P++ T +++++ + R + +A ++
Sbjct: 264 VETINCLLDSLGRAKLGK-EAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 322
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+ D GLK D + NV+L L + A LF+ MK K NV +Y I+I + K
Sbjct: 323 DMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 382
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ ++V G PD+ ++ LI G G ++D E+ M+EKG PD YN
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A+I + + + Y M EP++ T+ ++ +R V+EEM+ +
Sbjct: 443 ALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKK 502
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
GI P + T + L G A ++ G K L Y G+ +
Sbjct: 503 GICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIF 562
Query: 462 LDLWHEMQESGYPSDGEIY 480
+L + SG + EI+
Sbjct: 563 EELAQRAKFSGKFAAAEIF 581
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 120/278 (43%), Gaps = 37/278 (13%)
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC------GPDTNAYNAVISNYIS 349
+GF+ DS T++ ++ L + + + + V + M KG A+ A +
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKA 248
Query: 350 VGDFDECMKYYK---GMSSYNC-------------------------EPNMDTYTRLISG 381
VG F E MK YK G+ + NC PNM TYT L++G
Sbjct: 249 VGIF-ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNG 307
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
+ R + +A ++ +M+D+G+ P LE L A+ ++ + G +
Sbjct: 308 WCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPN 367
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ +Y +++R ++ + +M +SG D +Y +I G +L+ +++
Sbjct: 368 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 427
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKL-ESAYNLFRKI 538
E KG P Y+ L KL+A+ K+ E A ++ K+
Sbjct: 428 EMQEKGHPPDGKTYNALI-KLMANQKMPEHATRIYNKM 464
>sp|Q9FH87|PP447_ARATH Putative pentatricopeptide repeat-containing protein At5g65820
OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1
Length = 637
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 210/425 (49%), Gaps = 7/425 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E AL V+L ++ +V+NR +G FF WA K P ++ Y +VK L +
Sbjct: 100 LELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSK 159
Query: 176 RKFFDFMCNVLSDMAKEGVNPDL---ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
+ F + ++ +M KE NP L E +++ F A V KAI++L + FG + D
Sbjct: 160 MRQFGAVWGLIEEMRKE--NPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPD 217
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKE 292
+L LC+ V A+ LF M+ + N+ + ++ GW ++G+++E + VL +
Sbjct: 218 EYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQ 277
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+ GF PD + ++ L+ G AG++ DA ++ M+ +G P+ N Y +I V
Sbjct: 278 MNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDR 337
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
+E MK + M Y CE ++ TYT L+SG K K+ V ++M+ +G++PS T
Sbjct: 338 MEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMH 397
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
+ + + +K R++ + Y +++R G+ + LW+EM+E+G
Sbjct: 398 IMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG 457
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG-FCPSRLVYSK-LSNKLLASNKLES 530
+ + +I GL + G L A +E + +G F S+ K L N +L KLE
Sbjct: 458 LSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEM 517
Query: 531 AYNLF 535
A +++
Sbjct: 518 AKDVW 522
Score = 89.0 bits (219), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 152/379 (40%), Gaps = 50/379 (13%)
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWC------------LCQRLHVGAASSLF 256
+R G + + + G + G +F + +C L + GA L
Sbjct: 111 LRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLI 170
Query: 257 NSMKGK--VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
M+ + L + +++ ++ V + VL E+ GF PD F L++ L +
Sbjct: 171 EEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCK 230
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G + DA ++F+ M+ + + + +++ + VG E M+ EP++
Sbjct: 231 HGSVKDAAKLFEDMRMRF-PVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVD 289
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
YT L+SG + K+ADA ++ +M RG P+ T ++ LC AM ++ +
Sbjct: 290 YTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEME 349
Query: 435 KVGCKLSLTAYKLLLRRLSGFG---KCGMLLD------------------LWHEMQES-- 471
+ C+ + Y L+ +G KC ++LD + HE +ES
Sbjct: 350 RYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFE 409
Query: 472 ------------GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
Y D IY VI C +G+++ AV + E G P + +
Sbjct: 410 ECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMI 469
Query: 520 NKLLASNKLESAYNLFRKI 538
N L + L A + F+++
Sbjct: 470 NGLASQGCLLEASDHFKEM 488
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/341 (18%), Positives = 129/341 (37%), Gaps = 75/341 (21%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
VL M + G PD+ + ++ + AG++ A +L + G + +A V++ LC
Sbjct: 274 VLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALC 333
Query: 245 QRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ + A +F M + + +V+TY ++SG+ K G++ + VL +++ +G P L
Sbjct: 334 KVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSEL 393
Query: 304 TF-----------------------------------SFLIEGLGRAGRIDDAIEVFDTM 328
T+ + +I + G + +A+ +++ M
Sbjct: 394 TYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEM 453
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM--------SSYN------------- 367
+E G P + + +I+ S G E ++K M S Y
Sbjct: 454 EENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDK 513
Query: 368 -----------------CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
CE N+ ++T I L +A EM++ +P T
Sbjct: 514 KLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTF 573
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
++ L A + +K R + + ++ +K+ RR
Sbjct: 574 AKLMKGLKKLYNREFAGEITEKVRNMAAEREMS-FKMYKRR 613
Score = 35.8 bits (81), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 79/177 (44%), Gaps = 14/177 (7%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HP D+ YNV+++ + + ++M + G++P ++T I+++ G +
Sbjct: 424 HP----DIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLL 479
Query: 216 KAIQMLGRLEDFGLKFDAE--SLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYN 271
+A + GL ++ +L ++L + + + A +++ + KG NV+++
Sbjct: 480 EASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWT 539
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR------AGRIDDAI 322
I I G E E++ F P TF+ L++GL + AG I + +
Sbjct: 540 IWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGEITEKV 596
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 178 bits (452), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 190/389 (48%), Gaps = 7/389 (1%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
W IK DV ++NV++KAL R +L DM G+ PD +T + VM +I
Sbjct: 183 WGIK-----PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEE 237
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--NVMT 269
G + A+++ ++ +FG + S+NV++ C+ V A + M + F + T
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 270 YNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMK 329
+N +++G K G V ++ ++ EG+ PD T++ +I GL + G + +A+EV D M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Query: 330 EKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVA 389
+ C P+T YN +IS +E + + ++S P++ T+ LI GL +R
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 390 DALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
A+E+FEEM +G P T ++ LCS G A+ M K+ GC S+ Y L+
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 450 RRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFC 509
K +++ EM+ G + Y +I GLC ++E+A +M++ + +G
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 510 PSRLVYSKLSNKLLASNKLESAYNLFRKI 538
P + Y+ L ++ A ++ + +
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 183/410 (44%), Gaps = 9/410 (2%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
R A + FN A K PN + + Y I+ LGR FD M +L DM
Sbjct: 58 RSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMG 117
Query: 198 LETLSIVMDSFIR---AGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ--RLHVGAA 252
T I+++S+ + ++ + + +++FGLK D N +L L L +
Sbjct: 118 TSTFLILIESYAQFELQDEILSVVDWM--IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEI 175
Query: 253 SSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
S S+ G + +V T+N++I + Q+ +L+++ + G PD TF+ +++G
Sbjct: 176 SHAKMSVWG-IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY 234
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE-PN 371
G +D A+ + + M E GC + N ++ + G ++ + + + MS+ + P+
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
T+ L++GL K+ V A+E+ + ML G P T S + LC G A+ +
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIG 491
+ C + Y L+ L + +L + G D + +I GLC
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 492 QLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
A+ + EE KG P Y+ L + L + KL+ A N+ ++++++
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 141/316 (44%), Gaps = 18/316 (5%)
Query: 98 PEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVV----------NRGNLSGEAMV 147
P+E + + L KG +++AL N+ + L + V + N + EA
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEAL-NMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
+F + V+++ +YN ++ L + + + ++ M EG PD T + ++
Sbjct: 492 IFDEMEVH--GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFN 266
F R G + KA ++ + G + D + ++ LC+ V AS L S++ K +
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609
Query: 267 VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFS-PDSLTFSFLIEGLGR-AGRIDDAIEV 324
YN VI G + + E + +E++ + + PD++++ + GL G I +A++
Sbjct: 610 PHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDF 669
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
+ EKG P+ ++ + +++ +E + M + + + ++ GLLK
Sbjct: 670 LVELLEKGFVPEFSSLYMLAEGLLTLS-MEETLVKLVNMVMQKARFSEEEVS-MVKGLLK 727
Query: 385 SRKVADALEVFEEMLD 400
RK DAL +LD
Sbjct: 728 IRKFQDALATLGGVLD 743
>sp|Q9LEQ7|PP382_ARATH Pentatricopeptide repeat-containing protein At5g14820,
mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2
SV=1
Length = 598
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 203/404 (50%), Gaps = 1/404 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L + +DLS D++ +V+ R + + FF WA + A D ++YN ++ L +
Sbjct: 147 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAK 206
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ F+ M +VL +M +G+ +ET +I M +F A + KA+ + ++ + K E+
Sbjct: 207 TRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVET 265
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
+N +L L + A LF+ +K + N+MTY ++++GW ++ ++E R+ +++
Sbjct: 266 INCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 325
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
G PD + + ++EGL R+ + DAI++F MK KG P+ +Y +I ++ +
Sbjct: 326 HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 385
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
++Y+ M +P+ YT LI+G +K+ E+ +EM ++G P T + ++
Sbjct: 386 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 445
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
+ + P +Y K + + S+ + ++++ M +W EM + G
Sbjct: 446 LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP 505
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
D Y +I GL + G+ A +EE L KG + Y+K +
Sbjct: 506 DDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFA 549
Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 143/319 (44%), Gaps = 2/319 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V++ N ++ +LGR K VL D KE P++ T +++++ + R + +A ++
Sbjct: 263 VETINCLLDSLGRAKLGK-EAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 321
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+ D GLK D + NV+L L + + A LF+ MK K NV +Y I+I + K
Sbjct: 322 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 381
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ ++V G PD+ ++ LI G G ++D E+ M+EKG PD YN
Sbjct: 382 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 441
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A+I + + + Y M EP++ T+ ++ +R V++EM+ +
Sbjct: 442 ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK 501
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
GI P + T + L S G A ++ G K L Y G+ +
Sbjct: 502 GICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIF 561
Query: 462 LDLWHEMQESGYPSDGEIY 480
+L + SG + EI+
Sbjct: 562 EELAQRAKFSGKFAAAEIF 580
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC------GPDTNAYNAVISNYIS 349
+GF+ DS T++ ++ L + + + + V + M KG A+ A +
Sbjct: 188 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKA 247
Query: 350 VGDFDECMKYYK---GMSSYNC-------------------------EPNMDTYTRLISG 381
VG F E MK YK G+ + NC PNM TYT L++G
Sbjct: 248 VGIF-ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNG 306
Query: 382 LLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLS 441
+ R + +A ++ +M+D G+ P LE L A+ ++ + G +
Sbjct: 307 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN 366
Query: 442 LTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ +Y +++R ++ + +M +SG D +Y +I G +L+ +++
Sbjct: 367 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 426
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKL-ESAYNLFRKI 538
E KG P Y+ L KL+A+ K+ E ++ K+
Sbjct: 427 EMQEKGHPPDGKTYNALI-KLMANQKMPEHGTRIYNKM 463
>sp|Q9LN22|PPR54_ARATH Pentatricopeptide repeat-containing protein At1g20300,
mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2
SV=1
Length = 537
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 187/392 (47%), Gaps = 2/392 (0%)
Query: 149 FFNWAIKHPNV-AKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
FFNWA + K YN ++ G+ + FD +++ M V +ET +I++
Sbjct: 136 FFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRR 195
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNV 267
++RAG +A+ R+ED+G D + ++V+ L ++ A S F+S+K + +V
Sbjct: 196 YVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDV 255
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+ Y ++ GW + G++ E E+V KE+ G P+ T+S +I+ L R G+I A +VF
Sbjct: 256 IVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFAD 315
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M + GC P+ +N ++ ++ G ++ ++ Y M CEP+ TY LI +
Sbjct: 316 MLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDEN 375
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
+ +A++V M+ + + T + + + A MY K + C+ + Y +
Sbjct: 376 LENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNI 435
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL-RK 506
L+R G M+L + EM + + Y ++ C +G NA + +E + K
Sbjct: 436 LMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEK 495
Query: 507 GFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
PS +Y + +L + +L+ L K+
Sbjct: 496 CLTPSLSLYEMVLAQLRRAGQLKKHEELVEKM 527
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 122/248 (49%), Gaps = 2/248 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +V +Y++++ AL R +V +DM G P+ T + +M ++AG+ K +
Sbjct: 286 IEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVL 345
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
Q+ +++ G + D + N ++ C+ ++ A + N+M K K N T+N +
Sbjct: 346 QVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYI 405
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K V R+ +++ P+++T++ L+ + D +++ M +K P+
Sbjct: 406 EKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNV 465
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNC-EPNMDTYTRLISGLLKSRKVADALEVFE 396
N Y +++ + +G ++ K +K M C P++ Y +++ L ++ ++ E+ E
Sbjct: 466 NTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVE 525
Query: 397 EMLDRGIV 404
+M+ +G+V
Sbjct: 526 KMIQKGLV 533
>sp|Q3EAF8|PP294_ARATH Pentatricopeptide repeat-containing protein At3g62540,
mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2
SV=1
Length = 599
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 202/404 (50%), Gaps = 1/404 (0%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L + +DLS D++ +V+ R + + FF WA + A ++YN ++ L +
Sbjct: 148 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAK 207
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+ F+ M +VL +M +G+ +ET +I M +F A + KA+ + ++ + K E+
Sbjct: 208 TRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVET 266
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
+N +L L + A LF+ +K + N+MTY ++++GW ++ ++E R+ +++
Sbjct: 267 INCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 326
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
G PD + + ++EGL R+ + DAI++F MK KG P+ +Y +I ++ +
Sbjct: 327 HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 386
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
++Y+ M +P+ YT LI+G +K+ E+ +EM ++G P T + ++
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPS 475
+ + P +Y K + + S+ + ++++ M +W EM + G
Sbjct: 447 LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP 506
Query: 476 DGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
D Y +I GL + G+ A +EE L KG + Y+K +
Sbjct: 507 DDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFA 550
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 143/319 (44%), Gaps = 2/319 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V++ N ++ +LGR K VL D KE P++ T +++++ + R + +A ++
Sbjct: 264 VETINCLLDSLGRAKLGK-EAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 322
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLG 281
+ D GLK D + NV+L L + + A LF+ MK K NV +Y I+I + K
Sbjct: 323 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 382
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ ++V G PD+ ++ LI G G ++D E+ M+EKG PD YN
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A+I + + + Y M EP++ T+ ++ +R V++EM+ +
Sbjct: 443 ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK 502
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
GI P + T + L S G A ++ G K L Y G+ +
Sbjct: 503 GICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIF 562
Query: 462 LDLWHEMQESGYPSDGEIY 480
+L + SG + EI+
Sbjct: 563 EELAQRAKFSGKFAAAEIF 581
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 118/271 (43%), Gaps = 4/271 (1%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TYN ++S +K Q M VL+E+ +G TF+ ++ A A+ +F+ M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELM 255
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
K+ N ++ + E + + PNM TYT L++G + R +
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRVRNL 314
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
+A ++ +M+D G+ P LE L A+ ++ + G ++ +Y ++
Sbjct: 315 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIM 374
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+R ++ + +M +SG D +Y +I G +L+ +++E KG
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
Query: 509 CPSRLVYSKLSNKLLASNKL-ESAYNLFRKI 538
P Y+ L KL+A+ K+ E ++ K+
Sbjct: 435 PPDGKTYNALI-KLMANQKMPEHGTRIYNKM 464
>sp|P0C8A0|PP275_ARATH Pentatricopeptide repeat-containing protein At3g49730
OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1
Length = 638
Score = 172 bits (436), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 222/484 (45%), Gaps = 12/484 (2%)
Query: 63 FQISS--HNSFPNVYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDAL 120
F IS +N F V R N V + + DEF E++ + +E AL
Sbjct: 31 FHISRVLNNDF--VESTERKNGVGLVCPEKHEDEFAGEVEKIYRILRNHHSRVPKLELAL 88
Query: 121 WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFD 180
+DL ++ +V++R +G FF WA K P + +V L + + F
Sbjct: 89 NESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFG 148
Query: 181 FMCNVLSDMAKEGVNPDL---ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLN 237
+ ++ +M K NP+L E ++M F A V KA+++L + +GL+ D
Sbjct: 149 AVWGLIEEMRK--TNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFG 206
Query: 238 VVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
+L LC+ V AS +F M+ K N+ + ++ GW + G+++E + VL ++ G
Sbjct: 207 CLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAG 266
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD-FDEC 356
PD + F+ L+ G AG++ DA ++ + M+++G P+ N Y +I DE
Sbjct: 267 LEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEA 326
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
M+ + M Y CE ++ TYT LISG K + V ++M +G++PS T +
Sbjct: 327 MRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVA 386
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSD 476
+ + +K ++ GC L Y +++R G+ + LW+EM+ +G
Sbjct: 387 HEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPG 446
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGF--CPSRLVYSKLSNKLLASNKLESAYNL 534
+ + +I G + G L A +E + +G P L N L+ +KLE A ++
Sbjct: 447 VDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDV 506
Query: 535 FRKI 538
+ I
Sbjct: 507 WSCI 510
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 187/357 (52%), Gaps = 6/357 (1%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
++ M + G PDL T V++ + G + A+ +L ++E +K + N ++ LC
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ HV A LF M+ K + NV+TYN +I+ G+ + R+L ++ + +P+ +
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
TF+ LI+ + G++ +A ++ + M ++ PDT YN +I+ + DE + +K M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
S +C PN+ TY LI+G K ++V D +E+F EM RG+V +T T T+ ++ G
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
+A M++K+ + Y +LL L +GK L ++ +Q+S + IY +
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509
Query: 484 IAGLCNIGQLENA-VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I G+C G++ A L S++ P + Y+ + + L + L+ A +LFRK+K
Sbjct: 510 IEGMCKAGKVGEAWDLFCSLSIK----PDVVTYNTMISGLCSKRLLQEADDLFRKMK 562
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 177/358 (49%), Gaps = 4/358 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y +V L +R D N+L+ M + ++ + ++DS + V A+ +
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+E G++ + + N ++ CLC AS L ++M + K+ NV+T+N +I + K
Sbjct: 282 TEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKE 341
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++VE E++ +E++ PD++T++ LI G R+D+A ++F M K C P+ Y
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY 401
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I+ + ++ ++ ++ MS N TYT +I G ++ A VF++M+
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS 461
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+ T + L LCSYG A++++K +K +L++ Y ++ + GK G
Sbjct: 462 NRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
DL+ + D Y +I+GLC+ L+ A + + G P+ Y+ L
Sbjct: 522 AWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTL 576
Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 184/399 (46%), Gaps = 31/399 (7%)
Query: 124 NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAI------KHPNVAKD-------------VK 164
++DL+L+++ K+ +A V+ FN I +H VA D V
Sbjct: 238 DIDLALNLLNKM---EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ L + +LS+M ++ +NP++ T + ++D+F + G++ +A ++ +
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
+ D + N+++ C + A +F M K L N+ TYN +I+G+ K +V
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ + +E+ G +++T++ +I+G +AG D A VF M D Y+ +
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ S G D + +K + E N+ Y +I G+ K+ KV +A ++F + I
Sbjct: 475 LHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SI 531
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC--GML 461
P T + + LCS A +++K ++ G + Y L+R + C
Sbjct: 532 KPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR--ANLRDCDRAAS 589
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+L EM+ SG+ D ++ + + G+L+ + L M
Sbjct: 590 AELIKEMRSSGFVGDASTIS-LVTNMLHDGRLDKSFLNM 627
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 121/271 (44%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
++ TY+I I+ + + Q+ VL +++ G+ PD +T S L+ G + RI DA+ +
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M E G PDT + +I E + M C+P++ TY +++GL K
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+ AL + +M I + + ++ LC Y A+ ++ + G + ++ Y
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ L +G+ L M E + + +I G+L A + EE ++
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
+ P + Y+ L N N+L+ A +F+
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 115/263 (43%), Gaps = 46/263 (17%)
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISN---------YISVGDFDECMKYYKGMSSY- 366
++DDA+++F M + P +N ++S IS+G+ + + + +Y
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 367 ---NC----------------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
NC EP++ T + L++G S++++DA+ + ++M++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G P T T T+ + L + A+ + + + GC+ L Y ++ L G +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L+L ++M+ + ++ I+ +I LC +E AV + E KG P+ + Y+ L N
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 522 L-----------LASNKLESAYN 533
L L SN LE N
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKIN 325
>sp|Q9LFQ4|PP383_ARATH Pentatricopeptide repeat-containing protein At5g15010,
mitochondrial OS=Arabidopsis thaliana GN=At5g15010 PE=2
SV=2
Length = 572
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 215/461 (46%), Gaps = 23/461 (4%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+ + L +V S ++V ++++R E FF WA K + V+ Y+ ++ LG+
Sbjct: 114 LRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGK 173
Query: 176 RKFFDFMCNVLSDMAKEGVNPDL---ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFD 232
+ FD ++ +M K +P L +TL I++ + V KAI + F L+
Sbjct: 174 MRKFDTAWTLIDEMRK--FSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMG 231
Query: 233 AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSK-LGQVVEMERVLK 291
+ +L LC+ +V A L K K F+ ++NIV++GW +G E ERV
Sbjct: 232 IDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWM 291
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
E+ G D +++S +I + G ++ +++FD MK++ PD YNAV+
Sbjct: 292 EMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKAS 351
Query: 352 DFDECMKYYKGMSSYN-CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTI 410
E K M EPN+ TY LI L K+RK +A +VF+EML++G+ P+ T
Sbjct: 352 FVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTY 411
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+F+ L + + K RK+GC+ ++ Y +L+R+L + +L LW EM+E
Sbjct: 412 HAFMRILRT---GEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKE 468
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR----LVYSKLSNKLLASN 526
D Y +I GL G++E A +E KG P+ ++ S S K A
Sbjct: 469 KTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGKQYAEQ 528
Query: 527 KLESAYNLFRKIKIAR---------QNDYARRLWRSKGWHF 558
++ + K I + Q R++ R G+ F
Sbjct: 529 RITDSKGEVNKGAIVKKSEREKNFLQQPEVRKVVREHGYSF 569
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 185/352 (52%), Gaps = 1/352 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + G P+L T +V++ + G + A +L ++E ++ D N ++ LC+ H
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 200
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
V A +LF M+ K + NV+TY+ +IS G+ + ++L +++ + +P+ +TF+
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI+ + G+ +A ++ D M ++ PD YN++I+ + D+ + ++ M S +
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 320
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
C P++DTY LI G KS++V D E+F EM RG+V T T T+ ++ L G A
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 380
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++K+ G + Y +LL L GK L+++ MQ+S D IY +I G+
Sbjct: 381 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 440
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
C G++++ + KG P+ + Y+ + + L + L+ AY L +K+K
Sbjct: 441 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 183/388 (47%), Gaps = 5/388 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PN+ +Y V+V L +R D N+L+ M + D+ + ++DS + V
Sbjct: 147 QPNLV----TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 202
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVI 274
A+ + +E G++ + + + ++ CLC AS L + M + K+ N++T+N +I
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 262
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+ K G+ VE E++ +++ PD T++ LI G R+D A ++F+ M K C
Sbjct: 263 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD + YN +I + ++ + ++ MS + TYT LI GL +A +V
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F++M+ G+ P T + L+ LC+ G A+ ++ +K KL + Y ++ +
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK DL+ + G + Y +I+GLC+ L+ A ++++ G P
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Query: 515 YSKLSNKLLASNKLESAYNLFRKIKIAR 542
Y+ L L ++ L R+++ R
Sbjct: 503 YNTLIRAHLRDGDKAASAELIREMRSCR 530
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 170/360 (47%), Gaps = 8/360 (2%)
Query: 144 EAMVLFFNWAIK--HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
+A+ LF K PNV +Y+ ++ L + +LSDM ++ +NP+L T
Sbjct: 203 DALNLFKEMETKGIRPNVV----TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 258
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+ ++D+F++ G+ +A ++ + + D + N ++ C + A +F M
Sbjct: 259 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 318
Query: 262 KVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
K F ++ TYN +I G+ K +V + + +E+ G D++T++ LI+GL G D+
Sbjct: 319 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 378
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A +VF M G PD Y+ ++ + G ++ ++ + M + ++ YT +I
Sbjct: 379 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 438
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
G+ K+ KV D ++F + +G+ P+ T + + LCS A + KK ++ G
Sbjct: 439 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 498
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
Y L+R G +L EM+ + D ++A + + G+L+ + L M
Sbjct: 499 DSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKSFLDM 557
Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 124/308 (40%), Gaps = 35/308 (11%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N+ TYNI+I+ + + Q+ +L +++ G+ P +T S L+ G RI DA+ +
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 103
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M E G PDT + +I E + M C+PN+ TY +++GL K
Sbjct: 104 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 163
Query: 386 -----------------------------------RKVADALEVFEEMLDRGIVPSTGTI 410
R V DAL +F+EM +GI P+ T
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 411 TSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQE 470
+S + LCSYG A + + +L + L+ GK L +M +
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
D Y +I G C +L+ A + E + K P Y+ L S ++E
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 531 AYNLFRKI 538
LFR++
Sbjct: 344 GTELFREM 351
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 110/236 (46%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P F+ L+ + + + D I + + M+ G + YN +I+ + +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
M EP++ T + L++G ++++DA+ + ++M++ G P T T T+ + L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
+ A+ + + + GC+ +L Y +++ L G + +L ++M+ + +D I
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ +I LC +++A+ + +E KG P+ + YS L + L + + A L
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 77/173 (44%)
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P++ + +L+S + K +K + + E+M GI + T + C A+ +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
K K+G + S+ LL + + L +M E GY D + +I GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+ AV +++ +++G P+ + Y + N L ++ A+NL K++ A+
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
>sp|Q9FVX2|PP129_ARATH Pentatricopeptide repeat-containing protein At1g77360,
mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2
SV=2
Length = 517
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 205/413 (49%), Gaps = 2/413 (0%)
Query: 115 VIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALG 174
V++ AL + +S +VV V+NR +G FF W+ K + V++Y++++++
Sbjct: 86 VLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTA 145
Query: 175 RRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
+ + + M ++++ M K+ + ++ET IVM + RA +V +AI +E + L +
Sbjct: 146 KIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLV 204
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
+ N +L LC+ +V A +F +M+ + + TY+I++ GW K + + V +E++
Sbjct: 205 AFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMI 264
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
G PD +T+S +++ L +AGR+D+A+ + +M C P T Y+ ++ Y + +
Sbjct: 265 DAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLE 324
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
E + + M + ++ + LI K+ ++ + V +EM +G+ P++ + L
Sbjct: 325 EAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL 384
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
L G A +++K KV C+ Y ++++ + +W M++ G
Sbjct: 385 RHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF 443
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNK 527
+ +I GLC + A +++EE + G PS + + +L L+ +
Sbjct: 444 PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER 496
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 183/381 (48%), Gaps = 1/381 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV +YN I+ AL + + D VL+ M K GV PD T + ++ + +GQ +AI
Sbjct: 227 ILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI 286
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGW 277
L ++ G++ D + ++++ LC+ A +F+SM + L + TY ++ G+
Sbjct: 287 GFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGY 346
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ G +VEM +L +V G PD FS LI + G++D A+ VF M+++G P+
Sbjct: 347 ATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNA 406
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y AVI G ++ M Y++ M P Y LI GL K A E+ E
Sbjct: 407 VTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 466
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
MLDRGI +T S ++ C G + +++ ++G K ++ Y L+ GK
Sbjct: 467 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGK 526
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
+ L M G + Y +I G C I ++E+A+++ +E G P + Y+
Sbjct: 527 MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 586
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ L + + +A L+ +I
Sbjct: 587 ILQGLFQTRRTAAAKELYVRI 607
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 171/390 (43%), Gaps = 43/390 (11%)
Query: 189 MAKEG---VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE----------- 234
MA+ G V PDL T I++ RAG++ LG + G + DA
Sbjct: 75 MARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 134
Query: 235 -------------------------SLNVVLWCLCQRLHVGAASSLFNSMK----GKVLF 265
S N++L LC A L + M G
Sbjct: 135 DKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPP 194
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V++Y VI+G+ K G + E++ G PD +T++ +I L +A +D A+EV
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL 254
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+TM + G PD YN+++ Y S G E + + K M S EP++ TY+ L+ L K+
Sbjct: 255 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKN 314
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+ +A ++F+ M RG+ P T + L+ + G + + G +
Sbjct: 315 GRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVF 374
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+L+ + GK + ++ +M++ G + Y VI LC G++E+A+L E+ +
Sbjct: 375 SILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 434
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+G P +VY+ L + L NK E A L
Sbjct: 435 EGLSPGNIVYNSLIHGLCTCNKWERAEELI 464
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 156/340 (45%), Gaps = 5/340 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
HP D +++++ A ++ D V S M ++G+NP+ T V+ ++G+V
Sbjct: 368 HP----DHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
A+ ++ D GL N ++ LC A L M + + N + +N +I
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
K G+V+E E++ + +V G P+ +T++ LI G AG++D+A+++ M G
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+T Y+ +I+ Y + ++ + +K M S P++ TY ++ GL ++R+ A A E+
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKEL 603
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
+ + + G T L LC A+ M++ + KL + +++ L
Sbjct: 604 YVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLK 663
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G+ DL+ +G + Y + + G LE
Sbjct: 664 VGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703
Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 164/379 (43%), Gaps = 5/379 (1%)
Query: 162 DVKSYNVIVKAL-GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
D ++ ++K L ++ D M VL M + G P++ + +I++ + +A+++
Sbjct: 121 DAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALEL 180
Query: 221 LGRLED---FGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISG 276
L + D G D S V+ + A S ++ M + +L +V+TYN +I+
Sbjct: 181 LHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAA 240
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K + + VL +V G PD +T++ ++ G +G+ +AI M+ G PD
Sbjct: 241 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
Y+ ++ G E K + M+ +P + TY L+ G + + + +
Sbjct: 301 VVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 360
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
M+ GI P + + G AM+++ K R+ G + Y ++ L G
Sbjct: 361 LMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ + + +M + G +Y +I GLC + E A ++ E L +G C + + ++
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480
Query: 517 KLSNKLLASNKLESAYNLF 535
+ + ++ + LF
Sbjct: 481 SIIDSHCKEGRVIESEKLF 499
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ +M GV+PD+ T +I++ + + A ++ R+ + G + + + N++L LC
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 627
Query: 245 QRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ A +F ++ L T+NI+I K+G+ E + + + G P+
Sbjct: 628 KNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYW 687
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
T+ + E + G +++ ++F +M++ GC D+ N ++ + G+ Y
Sbjct: 688 TYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTY 743
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 84/189 (44%), Gaps = 3/189 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+VLF ++ V+ D+ +YN+I++ L + + + + + G +L T +I
Sbjct: 564 DALVLF--KEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++ + A+QM L LK +A + N+++ L + A LF +
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
L N TY ++ G + E++++ + G + DS +F++ L + G I A
Sbjct: 682 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAG 741
Query: 323 EVFDTMKEK 331
+ EK
Sbjct: 742 TYLSMIDEK 750
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 195/382 (51%), Gaps = 4/382 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D+ SYN+++ L R F +V+ M K G PD+ T+S +++ F + +V+ AI
Sbjct: 100 IGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAI 159
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ ++E+ G + D N ++ C+ V A LF+ M + V + +TYN +++G
Sbjct: 160 DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 219
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
G+ + R+++++V P+ +TF+ +I+ + G+ +A+++++ M + PD
Sbjct: 220 CCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 279
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN++I+ G DE + M + C P++ TY LI+G KS++V + ++F E
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M RG+V T T + ++ G P AA ++ ++ + ++ Y +LL L +
Sbjct: 340 MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS---RMDSRPNIRTYSILLYGLCMNWR 396
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L L+ MQ+S D Y VI G+C IG +E+A + KG P + Y+
Sbjct: 397 VEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTT 456
Query: 518 LSNKLLASNKLESAYNLFRKIK 539
+ + + + + L+RK++
Sbjct: 457 MISGFCRKRQWDKSDLLYRKMQ 478
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 132/286 (46%), Gaps = 1/286 (0%)
Query: 254 SLFNSMK-GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGL 312
SLF+ M+ + ++ +YNIVI+ + + V V+ +++ G+ PD +T S LI G
Sbjct: 90 SLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGF 149
Query: 313 GRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNM 372
+ R+ DAI++ M+E G PD YN +I +G ++ ++ + M +
Sbjct: 150 CQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADA 209
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
TY L++GL S + +DA + +M+ R IVP+ T T+ ++ G AM +Y++
Sbjct: 210 VTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 269
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+ + Y L+ L G+ + M G D Y +I G C +
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 329
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++ + E ++G + Y+ + + + ++A +F ++
Sbjct: 330 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 139/285 (48%), Gaps = 4/285 (1%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ V D +YN +V L + ++ DM + P++ T + V+D F++ G+
Sbjct: 200 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 259
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
+A+++ + + D + N ++ LC V A + + M K L +V+TYN
Sbjct: 260 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 319
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I+G+ K +V E ++ +E+ G D++T++ +I+G +AGR D A E+F M +
Sbjct: 320 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR- 378
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ Y+ ++ ++ + ++ M E ++ TY +I G+ K V DA
Sbjct: 379 --PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAW 436
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
++F + +G+ P + T+ + C + ++Y+K ++ G
Sbjct: 437 DLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 122/249 (48%), Gaps = 4/249 (1%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
++ +V ++ ++ + F + +M + V+PD+ T + +++ G+V +A
Sbjct: 239 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 298
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISG 276
QML + G D + N ++ C+ V + LF M + L + +TYN +I G
Sbjct: 299 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 358
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+ + G+ + + + + P+ T+S L+ GL R++ A+ +F+ M++ D
Sbjct: 359 YFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
YN VI +G+ ++ ++ +S +P++ +YT +ISG + R+ + ++
Sbjct: 416 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 475
Query: 397 EMLDRGIVP 405
+M + G++P
Sbjct: 476 KMQEDGLLP 484
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 111/274 (40%), Gaps = 35/274 (12%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P + FS ++ + ++ D I +F M+ G G D +YN VI+ F +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
M + EP++ T + LI+G + +V DA+++ +M + G P + ++ C
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL--SGF---------------------- 455
G + A+ ++ + + G + Y L+ L SG
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 456 -----------GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
GK + L+ EM D Y +I GLC G+++ A +++ +
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
KG P + Y+ L N S +++ LFR++
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Score = 37.0 bits (84), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%)
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
S+ + +L +++ +++ L+H M+ G D Y VI LC + A+ V+
Sbjct: 68 SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 127
Query: 501 EESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ ++ G+ P + S L N N++ A +L K++
Sbjct: 128 GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Score = 33.1 bits (74), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/165 (16%), Positives = 68/165 (41%)
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
+ R S S + + +++F +M+ +PS + L + + ++
Sbjct: 37 WGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME 96
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G L +Y +++ L + + L + +M + GY D +I G C ++
Sbjct: 97 VCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF 156
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+A+ ++ + GF P ++Y+ + + + A LF +++
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRME 201
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 185/352 (52%), Gaps = 1/352 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + G P+L T +V++ + G A+ +L ++E ++ D N ++ LC+ H
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
V A +LF M+ K + NV+TY+ +IS G+ + ++L +++ + +P+ +TF+
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI+ + G+ +A +++D M ++ PD YN++++ + D+ + ++ M S +
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
C P++ TY LI G KS++V D E+F EM RG+V T T T+ ++ L G A
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
++K+ G + Y +LL L GK L+++ MQ+S D IY +I G+
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
C G++++ + KG P+ + Y+ + + L + L+ AY L +K+K
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 183/388 (47%), Gaps = 5/388 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PN+ +Y V+V L +R D N+L+ M + D+ + ++DS + V
Sbjct: 222 QPNLV----TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVI 274
A+ + +E G++ + + + ++ CLC AS L + M + K+ N++T+N +I
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+ K G+ VE E++ +++ PD T++ L+ G R+D A ++F+ M K C
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
PD YN +I + ++ + ++ MS + TYT LI GL +A +V
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F++M+ G+ P T + L+ LC+ G A+ ++ +K KL + Y ++ +
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK DL+ + G + Y +I+GLC+ L+ A ++++ G P+
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 515 YSKLSNKLLASNKLESAYNLFRKIKIAR 542
Y+ L L ++ L R+++ R
Sbjct: 578 YNTLIRAHLRDGDKAASAELIREMRSCR 605
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 172/360 (47%), Gaps = 8/360 (2%)
Query: 144 EAMVLFFNWAIK--HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETL 201
+A+ LF K PNV +Y+ ++ L + +LSDM ++ +NP+L T
Sbjct: 278 DALNLFKEMETKGIRPNVV----TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 333
Query: 202 SIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG 261
+ ++D+F++ G+ +A ++ + + D + N ++ C + A +F M
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
Query: 262 KVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
K F +V+TYN +I G+ K +V + + +E+ G D++T++ LI+GL G D+
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 453
Query: 321 AIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLIS 380
A +VF M G PD Y+ ++ + G ++ ++ + M + ++ YT +I
Sbjct: 454 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513
Query: 381 GLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
G+ K+ KV D ++F + +G+ P+ T + + LCS A + KK ++ G
Sbjct: 514 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 573
Query: 441 SLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+ Y L+R G +L EM+ + D ++A + + G+L+ + L M
Sbjct: 574 NSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKSFLDM 632
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 128/312 (41%), Gaps = 35/312 (11%)
Query: 262 KVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDA 321
+++ + TYNI+I+ + + Q+ +L +++ G+ P +T S L+ G RI DA
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 322 IEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISG 381
+ + D M E G PDT + +I E + M C+PN+ TY +++G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 382 LLKS-----------------------------------RKVADALEVFEEMLDRGIVPS 406
L K R V DAL +F+EM +GI P+
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 407 TGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH 466
T +S + LCSYG A + + +L + L+ GK L+
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 467 EMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASN 526
+M + D Y ++ G C +L+ A + E + K P + Y+ L S
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 527 KLESAYNLFRKI 538
++E LFR++
Sbjct: 415 RVEDGTELFREM 426
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 110/236 (46%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P + F+ L+ + + + D I + + M+ YN +I+ + +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
M EP++ T + L++G ++++DA+ + ++M++ G P T T T+ + L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
+ A+ + + + GC+ +L Y +++ L G + L+L ++M+ + +D I
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ +I LC +++A+ + +E KG P+ + YS L + L + + A L
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 85/203 (41%)
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y ++ N + D+ + + GM P++ + +L+S + K +K + + E+M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
IV T + C A+ + K K+G + S+ LL +
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ L +M E GY D + +I GL + AV +++ +++G P+ + Y +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 520 NKLLASNKLESAYNLFRKIKIAR 542
N L + A NL K++ A+
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAK 255
>sp|Q9C9A2|PP112_ARATH Pentatricopeptide repeat-containing protein At1g71060,
mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2
SV=1
Length = 510
Score = 162 bits (409), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 214/431 (49%), Gaps = 7/431 (1%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E L +V LS ++ +V+ + + +G + F WA +YN ++++LG+
Sbjct: 81 VETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGK 140
Query: 176 RKFFDFMCNVLSDM-AKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAE 234
K F + +++ DM AK+ ++ ET +++ + RA +V +AI ++E+FG K ++
Sbjct: 141 IKQFKLIWSLVDDMKAKKLLSK--ETFALISRRYARARKVKEAIGAFHKMEEFGFKMESS 198
Query: 235 SLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEI 293
N +L L + +VG A +F+ MK K ++ +Y I++ GW + ++ ++ V +E+
Sbjct: 199 DFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREM 258
Query: 294 VAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
EGF PD + + +I +A + ++AI F+ M+++ C P + + ++I+ S
Sbjct: 259 KDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKL 318
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
++ +++++ S TY L+ S+++ DA + +EM +G+ P+ T
Sbjct: 319 NDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDII 378
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
L L A +Y+ + C+ +++ Y++++R + M + +W EM+ G
Sbjct: 379 LHHLIRMQRSKEAYEVYQ---TMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGV 435
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
++ +I LC+ +L+ A E L G P ++S+L LL + + +
Sbjct: 436 LPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTD 495
Query: 534 LFRKIKIARQN 544
L K+ R+
Sbjct: 496 LVVKMDRLRKT 506
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 194/406 (47%), Gaps = 3/406 (0%)
Query: 138 RGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPD 197
R N + EA+ L +K D+ +Y ++V L +R D ++L M + + P
Sbjct: 198 RHNRASEAVALVDRMVVK--GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255
Query: 198 LETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFN 257
+ + ++D+ V A+ + +++ G++ + + N ++ CLC AS L +
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 258 SM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG 316
M + K+ NV+T++ +I + K G++VE E++ E++ PD T+S LI G
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
R+D+A +F+ M K C P+ YN +I + DE M+ ++ MS N TYT
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
LI G ++R+ +A VF++M+ G++P T + L+ LC+ G A+++++ ++
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
+ + Y +++ + GK DL+ + G + Y +++G C G E A
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+ E +G P Y+ L L ++ L R+++ R
Sbjct: 556 DALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 601
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 191/395 (48%), Gaps = 1/395 (0%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+V+ +++ ++ ++ +Y++++ RR VL+ M K G PD+ TL+ ++
Sbjct: 99 LVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLL 158
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VL 264
+ F ++ A+ ++G++ + G + D+ + N ++ L + A +L + M K
Sbjct: 159 NGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ 218
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+++TY IV++G K G + +LK++ P + ++ +I+ L ++DA+ +
Sbjct: 219 PDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNL 278
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F M KG P+ YN++I + G + + + M PN+ T++ LI +K
Sbjct: 279 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
K+ +A ++++EM+ R I P T +S + C + A M++ C ++
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y L++ + ++L+ EM + G + Y +I G + +NA +V ++ +
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G P + YS L + L + K+E+A +F ++
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 181/388 (46%), Gaps = 22/388 (5%)
Query: 115 VIEDALWNV-NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKAL 173
I DAL N NV+ +L++ ++ N+G PNV +YN +++ L
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKG---------------IRPNVV----TYNSLIRCL 301
Query: 174 GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDA 233
+ +LSDM + +NP++ T S ++D+F++ G++ +A ++ + + D
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKE 292
+ + ++ C + A +F M K F NV+TYN +I G+ K +V E + +E
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 293 IVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGD 352
+ G +++T++ LI G +A D+A VF M G PD Y+ ++ + G
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 353 FDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
+ + ++ + EP++ TY +I G+ K+ KV D ++F + +G+ P+ T T+
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
+ C G A ++++ ++ G Y L+R G +L EM+
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 601
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+ D ++ + + G+L+ + L M
Sbjct: 602 FVGDASTIG-LVTNMLHDGRLDKSFLKM 628
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 97/222 (43%)
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
++DDA+ +F M + P ++ ++S + FD + + M + N+ TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
LI+ + +++ AL V +M+ G P T+ S L C A+ + + ++
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G + + L+ L + + L M G D Y V+ GLC G ++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ ++++ + P ++Y+ + + L + A NLF ++
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/166 (18%), Positives = 71/166 (42%)
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y ++ L K+ DA+ +F +M+ PS + L + + + ++ +
Sbjct: 49 YRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 108
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
+G +L Y +L+ + + L + +M + GY D ++ G C+ ++
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+AV ++ + + G+ P ++ L + L N+ A L ++ +
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV 214
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 176/355 (49%), Gaps = 1/355 (0%)
Query: 186 LSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
L M K G PDL T + +++ + ++ AI + ++ G K + + ++ CLC+
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 246 RLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
H+ A LFN M NV+TYN +++G ++G+ + +L++++ P+ +T
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
F+ LI+ + G++ +A E+++ M + PD Y ++I+ G DE + + M
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPH 424
C PN YT LI G KS++V D +++F EM +G+V +T T T ++ C G P
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 425 AAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVI 484
A ++ + + Y +LL L GK L ++ M++ + Y +I
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440
Query: 485 AGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
G+C +G++E+A + KG P+ + Y+ + + + A +LF+K+K
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 142/286 (49%), Gaps = 1/286 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V +YN +V L + +L DM K + P++ T + ++D+F++ G++ +A ++
Sbjct: 222 NVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY 281
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
+ + D + ++ LC + A +F M+ + N + Y +I G+ K
Sbjct: 282 NVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+V + ++ E+ +G +++T++ LI+G GR D A EVF+ M + PD Y
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N ++ G ++ + ++ M + N+ TYT +I G+ K KV DA ++F +
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYK 446
+G+ P+ T T+ + C G H A ++KK ++ G + + YK
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 152/324 (46%), Gaps = 7/324 (2%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
+V +Y +++ L + + + + + M G P++ T + ++ G+ A +L
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+ ++ + + ++ + + A L+N M + V +V TY +I+G
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G + E ++ + G P+ + ++ LI G ++ R++D +++F M +KG +T Y
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+I Y VG D + + MSS P++ TY L+ GL + KV AL +FE M
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
R + + T T ++ +C G A ++ G K ++ Y + +SGF + G+
Sbjct: 427 REMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTM---ISGFCRRGL 483
Query: 461 LLD---LWHEMQESGYPSDGEIYE 481
+ + L+ +M+E G+ + +Y+
Sbjct: 484 IHEADSLFKKMKEDGFLPNESVYK 507
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 128/309 (41%), Gaps = 41/309 (13%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI------ 322
T NIV+ Q L +++ GF PD +TF+ L+ G RI+DAI
Sbjct: 120 TCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI 179
Query: 323 -----------------------------EVFDTMKEKGCGPDTNAYNAVISNYISVGDF 353
E+F+ M G P+ YNA+++ +G +
Sbjct: 180 LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW 239
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
+ + M EPN+ T+T LI +K K+ +A E++ M+ + P T S
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQE 470
+ LC YG A M+ + GC + Y L+ GF K + D +++EM +
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIH---GFCKSKRVEDGMKIFYEMSQ 356
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G ++ Y +I G C +G+ + A V + + P Y+ L + L + K+E
Sbjct: 357 KGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEK 416
Query: 531 AYNLFRKIK 539
A +F ++
Sbjct: 417 ALMIFEYMR 425
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 96/219 (43%)
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
+ +DA+++F M P + ++S + +D + ++ M P + T
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
++ + S + A +M+ G P T TS L C + A+ ++ + +
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G K ++ Y L+R L ++L+++M +G + Y ++ GLC IG+ +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
++ + +++ P+ + ++ L + + KL A L+
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY 281
>sp|Q9SSR6|PPR78_ARATH Pentatricopeptide repeat-containing protein At1g52640,
mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2
SV=1
Length = 523
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 196/421 (46%), Gaps = 5/421 (1%)
Query: 113 KGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKA 172
K +E L + +S ++V +V+ R G FF WA + P+ A ++SY+++V+
Sbjct: 52 KDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILVEI 111
Query: 173 LGRRKFFDFMCNVLSDMAKEGVNPDL--ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLK 230
LG K F + + L + A+E ++ + IV ++ RA +A + R+ +FG+K
Sbjct: 112 LGSSKQFALLWDFLIE-AREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIK 170
Query: 231 FDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGWSKLGQVVEMERV 289
+ L+ +L LC + HV A F KG ++ + TY+I++ GW+++ +V
Sbjct: 171 PCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKV 230
Query: 290 LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYIS 349
E++ D L ++ L++ L ++G +D ++F M G PD ++ I Y
Sbjct: 231 FDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCD 290
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
GD K M Y+ PN+ T+ +I L K+ KV DA + +EM+ +G P T T
Sbjct: 291 AGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWT 350
Query: 410 ITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQ 469
S + C + + A + + + C Y ++L+ L G+ ++W M
Sbjct: 351 YNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMS 410
Query: 470 ESGYPSDGEIYEYVIAGLC-NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
E + Y +I GL G+LE A E + +G P L N+L+ ++
Sbjct: 411 ERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQM 470
Query: 529 E 529
+
Sbjct: 471 D 471
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 103/264 (39%)
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
IV +S+ E R +V G P L+ L ++ A E F K
Sbjct: 143 IVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGF 202
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G P Y+ ++ + + D K + M NC ++ Y L+ L KS V
Sbjct: 203 GIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGG 262
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
++F+EM + G+ P + F+ C G H+A + + ++ ++ + +++
Sbjct: 263 YKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKT 322
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L K L EM + G D Y ++A C+ ++ A ++ R P
Sbjct: 323 LCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPD 382
Query: 512 RLVYSKLSNKLLASNKLESAYNLF 535
R Y+ + L+ + + A ++
Sbjct: 383 RHTYNMVLKLLIRIGRFDRATEIW 406
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 59/151 (39%)
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
++A F M++ GI P + L LC + A + KA+ G S Y +L
Sbjct: 155 SEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSIL 214
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+R + ++ EM E D Y ++ LC G ++ + +E G
Sbjct: 215 VRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGL 274
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P ++ + + + SAY + ++K
Sbjct: 275 KPDAYSFAIFIHAYCDAGDVHSAYKVLDRMK 305
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 158 bits (400), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 181/356 (50%), Gaps = 1/356 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
++ M + G PDL T V++ + G + A+ +L ++E ++ D N ++ LC
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+ H+ A +LF M K + +V TY+ +IS G+ + R+L +++ +P+ +
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
TFS LI+ + G++ +A +++D M ++ PD Y+++I+ + DE ++ M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
S +C PN+ TY+ LI G K+++V + +E+F EM RG+V +T T T+ +
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A M++K+ VG ++ Y +LL L GK + ++ +Q S D Y +
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
I G+C G++E+ + KG P+ + Y+ + + E A +L +K+K
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK 565
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 183/379 (48%), Gaps = 1/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y +V L +R D ++L M K + D+ + ++D + + A+ +
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+++ G++ D + + ++ CLC AS L + M + K+ NV+T++ +I + K
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++VE E++ E++ PD T+S LI G R+D+A +F+ M K C P+ Y
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 401
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +I + +E M+ ++ MS N TYT LI G ++R +A VF++M+
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 461
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ P+ T L+ LC G AM++++ ++ + + Y +++ + GK
Sbjct: 462 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVED 521
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+L+ + G + Y +I+G C G E A ++++ G P+ Y+ L
Sbjct: 522 GWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIR 581
Query: 521 KLLASNKLESAYNLFRKIK 539
L E++ L ++++
Sbjct: 582 ARLRDGDREASAELIKEMR 600
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 164/376 (43%), Gaps = 34/376 (9%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
+ +N ++ A+ + F+ + ++ M G++ DL T SI ++ F R Q+ A+ +L
Sbjct: 83 IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLA 142
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQ 282
++ G + D +L+ +L C + A +L + Q
Sbjct: 143 KMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD------------------------Q 178
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
+VEM G+ PD+ TF+ LI GL + +A+ + D M ++GC PD Y
Sbjct: 179 MVEM----------GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
V++ GD D + K M E ++ Y +I GL K + + DAL +F EM ++G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
I P T +S + LC+YG A + + ++ + L+ GK
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKL 522
L+ EM + D Y +I G C +L+ A + E + K P+ + YS L
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 523 LASNKLESAYNLFRKI 538
+ ++E LFR++
Sbjct: 409 CKAKRVEEGMELFREM 424
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 200/440 (45%), Gaps = 16/440 (3%)
Query: 102 LRGVFLQKLKGKGV-IEDALWNVNVDLSLDVVGKVVN----RGNLSGEAMVLFFNWAIKH 156
+ G+FL + V + D + L G VVN RG++ + L ++
Sbjct: 195 IHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID---LALSLLKKMEK 251
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
+ DV YN I+ L + K D N+ ++M +G+ PD+ T S ++ G+
Sbjct: 252 GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 311
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVIS 275
A ++L + + + + + + ++ + + A L++ M K + ++ TY+ +I+
Sbjct: 312 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 371
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G+ ++ E + + + ++++ P+ +T+S LI+G +A R+++ +E+F M ++G
Sbjct: 372 GFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+T Y +I + D D +K M S PN+ TY L+ GL K+ K+A A+ VF
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 491
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
E + + P T +E +C G ++ G ++ AY + +SGF
Sbjct: 492 EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTM---ISGF 548
Query: 456 GKCGMLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
+ G + L +M+E G + Y +I G E + +++E GF
Sbjct: 549 CRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDA 608
Query: 513 LVYSKLSNKLLASNKLESAY 532
++N +L +L+ ++
Sbjct: 609 STIGLVTN-MLHDGRLDKSF 627
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 105/237 (44%), Gaps = 35/237 (14%)
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISN---------YISVGDFDECMKYYKGMSSY- 366
++DDA+++F M + P +N ++S IS+G+ + + + +Y
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 367 ---NC----------------------EPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
NC EP++ T + L++G S++++DA+ + ++M++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G P T T T+ + L + A+ + + + GC+ L Y ++ L G +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
L L +M++ +D IY +I GLC +++A+ + E KG P YS L
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 206/444 (46%), Gaps = 15/444 (3%)
Query: 97 LPEERLRGVFLQKLKGKGVIEDAL-WNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIK 155
L + R L+ L+G G + D + +NV ++ G ++ VL
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNV-------MISGYCKAGEINNALSVL------D 196
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
+V+ DV +YN I+++L VL M + PD+ T +I++++ R V
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
A+++L + D G D + NV++ +C+ + A N M NV+T+NI++
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
G+ ++ E++L +++ +GFSP +TF+ LI L R G + AI++ + M + GC
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P++ +YN ++ + D ++Y + M S C P++ TY +++ L K KV DA+E+
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
++ +G P T + ++ L G A+ + + R K Y L+ LS
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
GK + +HE + G + + ++ GLC Q + A+ + + +G P+
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETS 556
Query: 515 YSKLSNKLLASNKLESAYNLFRKI 538
Y+ L L + A L ++
Sbjct: 557 YTILIEGLAYEGMAKEALELLNEL 580
Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 169/354 (47%), Gaps = 2/354 (0%)
Query: 186 LSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ 245
L +M G PD+ + ++ F R G+ KA ++L LE G D + NV++ C+
Sbjct: 125 LENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCK 184
Query: 246 RLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
+ A S+ + M V +V+TYN ++ G++ + VL ++ PD +T+
Sbjct: 185 AGEINNALSVLDRMS--VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITY 242
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ LIE R + A+++ D M+++GC PD YN +++ G DE +K+ M S
Sbjct: 243 TILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
C+PN+ T+ ++ + + + DA ++ +ML +G PS T + LC G
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ + +K + GC+ + +Y LL K ++ M G D Y ++
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
LC G++E+AV ++ + KG P + Y+ + + L + K A L +++
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 181/423 (42%), Gaps = 40/423 (9%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSF 208
F + H NV D+ +++ R +L + G PD+ T ++++ +
Sbjct: 124 FLENMVYHGNVP-DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGY 182
Query: 209 IRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NV 267
+AG++ A+ +L R+ + D + N +L LC + A + + M + + +V
Sbjct: 183 CKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 239
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
+TY I+I + V ++L E+ G +PD +T++ L+ G+ + GR+D+AI+ +
Sbjct: 240 ITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND 299
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDE---------------------------CMKYY 360
M GC P+ +N ++ + S G + + C K
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGL 359
Query: 361 KG--------MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITS 412
G M + C+PN +Y L+ G K +K+ A+E E M+ RG P T +
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESG 472
L LC G A+ + + GC L Y ++ L+ GK G + L EM+
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 473 YPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAY 532
D Y ++ GL G+++ A+ E R G P+ + ++ + L S + + A
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAI 539
Query: 533 NLF 535
+
Sbjct: 540 DFL 542
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 126/243 (51%), Gaps = 1/243 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V ++N+++ L R+ ++L M + G P+ + + ++ F + ++ +AI+ L
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVM-TYNIVISGWSKLG 281
R+ G D + N +L LC+ V A + N + K V+ TYN VI G +K G
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
+ + ++L E+ A+ PD++T+S L+ GL R G++D+AI+ F + G P+ +N
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFN 523
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+++ D + + M + C+PN +YT LI GL +ALE+ E+ ++
Sbjct: 524 SIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583
Query: 402 GIV 404
G++
Sbjct: 584 GLM 586
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 121/260 (46%), Gaps = 3/260 (1%)
Query: 279 KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTN 338
+ G++ E + L+ +V G PD + + LI G R G+ A ++ + ++ G PD
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 339 AYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEM 398
YN +IS Y G+ + + MS P++ TY ++ L S K+ A+EV + M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 399 LDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKC 458
L R P T T +E C AM + + R GC + Y +L+ + G+
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+ ++M SG + + ++ +C+ G+ +A ++ + LRKGF PS + ++ L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 519 SNKLLASNKLESAYNLFRKI 538
N L L A ++ K+
Sbjct: 351 INFLCRKGLLGRAIDILEKM 370
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 177/354 (50%), Gaps = 1/354 (0%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + + + SIV+DS + G A+ + +E G+K D + + ++ LC
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
+ + M G+ ++ +V+T++ +I + K G+++E + + E++ G +PD++T++
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI+G + + +A ++FD M KGC PD Y+ +I++Y D+ M+ ++ +SS
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
PN TY L+ G +S K+ A E+F+EM+ RG+ PS T L+ LC G + A+
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
+++K +K L + Y +++ + K L+ + + G D Y +I GL
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 535
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIA 541
C G L A ++ + G P Y+ L L + L S+ L ++K+
Sbjct: 536 CKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 589
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 187/413 (45%), Gaps = 36/413 (8%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
+N + A+ R K +D + M G+ D+ T++I+++ + R ++ A +LGR
Sbjct: 73 FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAW 132
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVV 284
G + D + + ++ C V A +L + M + K +++T + +I+G G+V
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 285 EMERVLKEIVAEGFSPDSLT-----------------------------------FSFLI 309
E ++ +V GF PD +T +S +I
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
+ L + G DDA+ +F+ M+ KG D Y+++I + G +D+ K + M N
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
P++ T++ LI +K K+ +A E++ EM+ RGI P T T S ++ C H A M
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
+ GC+ + Y +L+ + + L+ E+ G + Y ++ G C
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 490 IGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
G+L A + +E + +G PS + Y L + L + +L A +F K++ +R
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 205/465 (44%), Gaps = 71/465 (15%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+VL F ++ + D+ + +++ R+K F +VL K G PD T S ++
Sbjct: 88 LVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLV 147
Query: 206 DSFIRAGQVYKAIQ-----------------------------------MLGRLEDFGLK 230
+ F G+V +A+ ++ R+ ++G +
Sbjct: 148 NGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQ 207
Query: 231 FDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVV----- 284
D + VL LC+ + A LF M+ + + +V+ Y+IVI K G
Sbjct: 208 PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSL 267
Query: 285 --EME----------------------------RVLKEIVAEGFSPDSLTFSFLIEGLGR 314
EME ++L+E++ PD +TFS LI+ +
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G++ +A E+++ M +G PDT YN++I + E + + M S CEP++ T
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y+ LI+ K+++V D + +F E+ +G++P+T T + + C G +AA ++++
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G S+ Y +LL L G+ L+++ +MQ+S IY +I G+CN +++
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+A + KG P + Y+ + L L A LFRK+K
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 175/344 (50%), Gaps = 7/344 (2%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF +K + DV +Y+ ++ L +D +L +M + PD+ T S
Sbjct: 263 DALSLFNEMEMK--GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK- 262
++D F++ G++ +A ++ + G+ D + N ++ C+ + A+ +F+ M K
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+++TY+I+I+ + K +V + R+ +EI ++G P+++T++ L+ G ++G+++ A
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
E+F M +G P Y ++ G+ ++ ++ ++ M + Y +I G+
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
+ KV DA +F + D+G+ P T + LC G A M+++K ++ GC
Sbjct: 501 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560
Query: 443 TAYKLLLRRLSGFGKCGML--LDLWHEMQESGYPSDGEIYEYVI 484
Y +L+R + G G++ ++L EM+ G+ +D + VI
Sbjct: 561 FTYNILIR--AHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 1/293 (0%)
Query: 247 LHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
+ V A LF SM + + L + +N + S ++ Q + K + G D T
Sbjct: 49 IKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTM 108
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
+ +I R ++ A V + G PDT ++ +++ + G E + M
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
P++ T + LI+GL +V++AL + + M++ G P T L LC G
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A+ +++K + K S+ Y +++ L G L L++EM+ G +D Y +I
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
GLCN G+ ++ ++ E + + P + +S L + + KL A L+ ++
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 91/223 (40%), Gaps = 35/223 (15%)
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
+++DAI++F++M + P +N + S +D + + KGM E +M T T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+I+ + +K+ A V G P T T ++ + C G A+
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVA-------- 161
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
L+D EM++ D +I GLC G++ A
Sbjct: 162 ------------------------LVDRMVEMKQR---PDLVTVSTLINGLCLKGRVSEA 194
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+++++ + GF P + Y + N+L S A +LFRK++
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKME 237
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 181/360 (50%), Gaps = 4/360 (1%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
++++ M + G+ PD+ + ++DS + G V A+ + ++E++G++ D ++ L
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 244 CQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDS 302
C A SL M K K+ +V+T+N +I + K G+ ++ E + E++ +P+
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 303 LTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
T++ LI G G +D+A ++F M+ KGC PD AY ++I+ + D+ MK +
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
MS N TYT LI G + K A EVF M+ RG+ P+ T L LC G
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 423 PHAAMMMYKKARKV---GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
A+M+++ +K G ++ Y +LL L GK L ++ +M++
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT 462
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y +I G+C G+++NAV + KG P+ + Y+ + + L A+ LFRK+K
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 192/381 (50%), Gaps = 4/381 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V+ D+ + N+++ + + L M K G PD+ T + +++ F ++ +A+
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG-KVLFNVMTYNIVISGW 277
M+ ++ + G+K D ++ LC+ HV A SLF+ M+ + +V+ Y +++G
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
G+ + + +L+ + PD +TF+ LI+ + G+ DA E+++ M P+
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y ++I+ + G DE + + M + C P++ YT LI+G K +KV DA+++F E
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M +G+ +T T T+ ++ G P+ A ++ G ++ Y +LL L GK
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 458 CGMLLDLWHEMQE---SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
L ++ +MQ+ G + Y ++ GLC G+LE A++V E+ ++ +
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT 462
Query: 515 YSKLSNKLLASNKLESAYNLF 535
Y+ + + + K+++A NLF
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLF 483
Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 175/373 (46%), Gaps = 9/373 (2%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
++ + M + P + + +++ + + I + L+ G+ D + N+++ C
Sbjct: 58 DLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCF 117
Query: 244 CQRLHVGAASSLFNSMKGKVLF--NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
CQ ASS M K+ F +++T+ +I+G+ ++ E ++ ++V G PD
Sbjct: 118 CQSSQPYLASSFLGKMM-KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPD 176
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+ ++ +I+ L + G ++ A+ +FD M+ G PD Y ++++ + G + + +
Sbjct: 177 VVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLR 236
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
GM+ +P++ T+ LI +K K DA E++ EM+ I P+ T TS + C G
Sbjct: 237 GMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEG 296
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGE 478
A M+ GC + AY L ++GF KC + D +++EM + G +
Sbjct: 297 CVDEARQMFYLMETKGCFPDVVAYTSL---INGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y +I G +G+ A V + +G P+ Y+ L + L + K++ A +F +
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Query: 539 KIARQNDYARRLW 551
+ + A +W
Sbjct: 414 QKREMDGVAPNIW 426
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 156/324 (48%), Gaps = 16/324 (4%)
Query: 159 VAKDVKSYNVIVKAL---GRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
+ DV Y +V L GR + D ++L M K + PD+ T + ++D+F++ G+
Sbjct: 208 IRPDVVMYTSLVNGLCNSGRWRDAD---SLLRGMTKRKIKPDVITFNALIDAFVKEGKFL 264
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVI 274
A ++ + + + + ++ C V A +F M+ K F +V+ Y +I
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+G+ K +V + ++ E+ +G + +++T++ LI+G G+ G+ + A EVF M +G
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE---PNMDTYTRLISGLLKSRKVADA 391
P+ YN ++ G + + ++ M + PN+ TY L+ GL + K+ A
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
L VFE+M R + T T ++ +C G A+ ++ G K ++ Y +
Sbjct: 445 LMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTM--- 501
Query: 452 LSGFGKCGMLLD---LWHEMQESG 472
+SG + G+ + L+ +M+E G
Sbjct: 502 ISGLFREGLKHEAHVLFRKMKEDG 525
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 82/197 (41%)
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y ++ N + F+E + + M P++ +T+L++ + K +K + + + +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
G+ T + C P+ A K K+G + + + L+ +
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ + ++M E G D +Y +I LC G + A+ + ++ G P ++Y+ L
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 520 NKLLASNKLESAYNLFR 536
N L S + A +L R
Sbjct: 220 NGLCNSGRWRDADSLLR 236
Score = 40.8 bits (94), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 70/145 (48%), Gaps = 4/145 (2%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAK---EGVNPDLETLSIVMDSFIRAGQVY 215
V ++++YNV++ L + DM K +GV P++ T ++++ G++
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLE 442
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVI 274
KA+ + + + + +++ +C+ V A +LF S+ K V NV+TY +I
Sbjct: 443 KALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFS 299
SG + G E + +++ +G S
Sbjct: 503 SGLFREGLKHEAHVLFRKMKEDGVS 527
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 194/411 (47%), Gaps = 4/411 (0%)
Query: 130 DVVGKVVNRGNLSGEAMVLFFNWAIKHP-NVAKDVKSYNVIVKALGRRKFFDFMCNVLSD 188
++V V+ R G + FF++ H D S+++ + R + +++
Sbjct: 57 NLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHR 116
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + P +T +IV + + AG+ KA+++ + + G D S N +L LC+
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 249 VGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
V A LF +++G+ + +TYN++++GW + + + VLKE+V G +P+ T++ +
Sbjct: 177 VEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTM 236
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
++G RAG+I A E F MK++ C D Y V+ + G+ + M
Sbjct: 237 LKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGV 296
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
P++ TY +I L K V +A+ +FEEM+ RG P+ T + L G
Sbjct: 297 LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEE 356
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ ++ GC+ + Y +++R S + L L+ +M + + Y +I+G+
Sbjct: 357 LMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMF 416
Query: 489 NIGQLENAVL---VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
+ E+ V+ ++ E + +GF P + ++++ N LL + A + R
Sbjct: 417 VRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILR 467
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 4/283 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YNVI+ K VL +M + G+NP+L T + ++ F RAGQ+ A +
Sbjct: 194 DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFF 253
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
++ + D + V+ + A ++F+ M + VL +V TYN +I K
Sbjct: 254 LEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKK 313
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
V + +E+V G+ P+ T++ LI GL AG E+ M+ +GC P+ Y
Sbjct: 314 DNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTY 373
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD---ALEVFEE 397
N +I Y + ++ + ++ M S +C PN+DTY LISG+ ++ D A ++ E
Sbjct: 374 NMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLE 433
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKL 440
M++RG +P T L L G A + + K G +L
Sbjct: 434 MVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKSGSRL 476
Score = 92.4 bits (228), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 114/243 (46%), Gaps = 7/243 (2%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P TF+ + E AG+ D A+++F M E GC D ++N ++ ++ +
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
++ + + TY +++G ++ ALEV +EM++RGI P+ T + L+
Sbjct: 184 FRALRG-RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR 242
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSD 476
G A + + +K C++ + Y ++ GFG G + +++ EM G
Sbjct: 243 AGQIRHAWEFFLEMKKRDCEIDVVTYTTVVH---GFGVAGEIKRARNVFDEMIREGVLPS 299
Query: 477 GEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFR 536
Y +I LC +ENAV++ EE +R+G+ P+ Y+ L L + + L +
Sbjct: 300 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359
Query: 537 KIK 539
+++
Sbjct: 360 RME 362
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 146/327 (44%), Gaps = 6/327 (1%)
Query: 216 KAIQMLGRLEDFGLKF--DAESLNVVLWCLCQRLHVGAAS-SLFNSMKG-KVLFNVMTYN 271
KA+Q L++ ++ DA S ++ + + RLH+ SL + M+ ++ + T+
Sbjct: 72 KALQFFHFLDNHHREYVHDASSFDLAI-DIAARLHLHPTVWSLIHRMRSLRIGPSPKTFA 130
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
IV ++ G+ + ++ + G D +F+ +++ L ++ R++ A E+F ++ +
Sbjct: 131 IVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR 190
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
DT YN +++ + + + ++ K M PN+ TY ++ G ++ ++ A
Sbjct: 191 -FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHA 249
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
E F EM R T T+ + G A ++ + + G S+ Y +++
Sbjct: 250 WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQV 309
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L + ++ EM GY + Y +I GL + G+ +M+ +G P+
Sbjct: 310 LCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 369
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKI 538
Y+ + +++E A LF K+
Sbjct: 370 FQTYNMMIRYYSECSEVEKALGLFEKM 396
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 88/178 (49%), Gaps = 4/178 (2%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V V +YN +++ L ++ + + +M + G P++ T ++++ AG+ +
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE 355
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
+++ R+E+ G + + ++ N+++ + V A LF M G L N+ TYNI+ISG
Sbjct: 356 ELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Query: 278 ---SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+ +V ++L E+V GF P TF+ ++ GL G A E+ + G
Sbjct: 416 FVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKSG 473
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 191/401 (47%), Gaps = 3/401 (0%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
N + EAM L K D+ +Y V+V L +R D N+L+ M + + P +
Sbjct: 200 NKASEAMALIDRMVAK--GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 257
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
+ ++D + + A+ + +E G++ + + + ++ CLC AS L + M
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 260 -KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+ K+ +V T++ +I + K G++VE E++ E+V P +T+S LI G R+
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
D+A ++F+ M K C PD YN +I + +E M+ ++ MS N TY L
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I GL ++ A E+F+EM+ G+ P+ T + L+ LC G AM++++ ++
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ ++ Y +++ + GK DL+ + G D Y +I+G C G E A
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ +E G P+ Y+ L L E++ L ++++
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 185/407 (45%), Gaps = 36/407 (8%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM---- 220
+Y++++ RR VL M K G P++ TLS +++ + + ++ +A+ +
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 221 -------------------------------LGRLEDFGLKFDAESLNVVLWCLCQRLHV 249
+ R+ G + D + VV+ LC+R
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 250 GAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL 308
A +L N M +GK+ V+ YN +I G K + + + KE+ +G P+ +T+S L
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 309 IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNC 368
I L GR DA + M E+ PD ++A+I ++ G E K Y M +
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
+P++ TY+ LI+G ++ +A ++FE M+ + P T + ++ C Y M
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLC 488
++++ + G + Y +L++ L G C M +++ EM G P + Y ++ GLC
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
G+LE A++V E R P+ Y+ + + + K+E ++LF
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 190/408 (46%), Gaps = 25/408 (6%)
Query: 114 GVIEDALWNV-NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAI------KHP----NVAKD 162
GV+ + L + DL+ +++ K+ +G L E VL +N I KH N+ K+
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKM-EQGKL--EPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 163 VKSYNVIVKALGRRKFFDFMCN---------VLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+++ + + +CN +LSDM + +NPD+ T S ++D+F++ G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
+ +A ++ + + + + ++ C + A +F M K F +V+TYN
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G+ K +V E V +E+ G +++T++ LI+GL +AG D A E+F M G
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P+ YN ++ G ++ M ++ + EP + TY +I G+ K+ KV D
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
++F + +G+ P + + C G A ++K+ ++ G + Y L+R
Sbjct: 522 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 581
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
G +L EM+ G+ D ++ + + G+L+ + L M
Sbjct: 582 LRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSFLDM 628
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 122/270 (45%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
N TY+I+I+ + + Q+ VL +++ G+ P+ +T S L+ G + RI +A+ +
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M G P+T +N +I E M M + C+P++ TY +++GL K
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
A + +M + P + ++ LC Y A+ ++K+ G + ++ Y
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
L+ L +G+ L +M E D + +I G+L A + +E ++
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ PS + YS L N ++L+ A +F
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 104/227 (45%)
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
E+V P + FS L+ + + + D I + + M+ G + Y+ +I+ +
Sbjct: 71 EMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRS 130
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
+ M EPN+ T + L++G S+++++A+ + ++M G P+T T
Sbjct: 131 QLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFN 190
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
+ + L + AM + + GC+ L Y +++ L G + +L ++M++
Sbjct: 191 TLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG 250
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
IY +I GLC +++A+ + +E KG P+ + YS L
Sbjct: 251 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 128/293 (43%), Gaps = 1/293 (0%)
Query: 247 LHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTF 305
L + A +LF M K + +++ ++ ++S +K+ + + + +++ G + T+
Sbjct: 60 LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 119
Query: 306 SFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS 365
S LI R ++ A+ V M + G P+ +++++ Y E + M
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 366 YNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHA 425
+PN T+ LI GL K ++A+ + + M+ +G P T + LC G
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 426 AMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIA 485
A + K + + + Y ++ L + L+L+ EM+ G + Y +I+
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
LCN G+ +A ++ + + + P +S L + + KL A L+ ++
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Score = 40.0 bits (92), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 76/181 (41%), Gaps = 6/181 (3%)
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+ + G +SY D +L L K+ DA+ +F EM+ PS + L +
Sbjct: 38 RAFSGKTSY------DYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAI 91
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
+ + ++ + +G + Y +L+ + + L + +M + GY +
Sbjct: 92 AKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNI 151
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
++ G C+ ++ AV ++++ G+ P+ + ++ L + L NK A L +
Sbjct: 152 VTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDR 211
Query: 538 I 538
+
Sbjct: 212 M 212
>sp|Q0WP85|PP150_ARATH Pentatricopeptide repeat-containing protein At2g13420,
mitochondrial OS=Arabidopsis thaliana GN=At2g13420 PE=2
SV=1
Length = 509
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 209/435 (48%), Gaps = 16/435 (3%)
Query: 116 IEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGR 175
+E +L + L+ +++ + + R + + + FF + P+ + S+N+I+ LGR
Sbjct: 58 MESSLQLNGISLTPNLIHQTLLRLRHNSKIALSFFQYLRSLPSPSTTPTSFNLIIDILGR 117
Query: 176 RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDF--GLKFDA 233
+ FD + ++ +M + +P ET I++ I AG +A++ F +F
Sbjct: 118 VRQFDVVRQLIVEM--DQTSP--ETFLILVKRLIAAGLTRQAVRAFDDAPCFLENRRFRL 173
Query: 234 ESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEI 293
+L LC+ + A +FN K + + Y I+I+GW KL ++ E+ L E+
Sbjct: 174 VEFGFLLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTILIAGWCKLRRIDMAEKFLVEM 233
Query: 294 VAEGFSPDSLTFSFLIEGLGRAG----------RIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ G P+ +T++ L+ G+ R + +A +VFD M+++G PD +++ V
Sbjct: 234 IESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVTSFSIV 293
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
+ Y + + K M + P ++TYT ++ L ++ +A E+ E M++ GI
Sbjct: 294 LHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGI 353
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
PS+ T F + + AM +Y+K + CK S Y +LL GK + +
Sbjct: 354 SPSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKE 413
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+W +++ S D + Y ++ GLC+ + + A E + +GF P +L + L L+
Sbjct: 414 IWDDLKASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTFETLYKGLI 473
Query: 524 ASNKLESAYNLFRKI 538
SNK+ + L +K+
Sbjct: 474 QSNKMRTWRRLKKKL 488
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 104/245 (42%), Gaps = 46/245 (18%)
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
F FL++ L + G A+ VF+ KE+ G D Y +I+ + + D K+ M
Sbjct: 176 FGFLLDTLCKYGYTKMAVGVFNERKEE-FGSDEKVYTILIAGWCKLRRIDMAEKFLVEMI 234
Query: 365 SYNCEPNMDTYTRLISGLLKS----------RKVADALEVFEEMLDRGIVPSTGTITSFL 414
EPN+ TY L++G+ ++ R V +A +VF+EM RGI P +TSF
Sbjct: 235 ESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPD---VTSF- 290
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
+ MY +A K +L+L KL M+ G
Sbjct: 291 ---------SIVLHMYSRAHKA--ELTLDKMKL--------------------MKAKGIS 319
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
E Y V+ LC+ G+LE A ++E + G PS Y+ + A NL
Sbjct: 320 PTIETYTSVVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKGRKDANGAMNL 379
Query: 535 FRKIK 539
+RK+K
Sbjct: 380 YRKMK 384
Score = 39.7 bits (91), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ L + LL L +G M + +++E +E + SD ++Y +IAG C + +++ A
Sbjct: 170 RFRLVEFGFLLDTLCKYGYTKMAVGVFNERKEE-FGSDEKVYTILIAGWCKLRRIDMAEK 228
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQ 543
+ E + G P+ + Y+ L N + + L R ++ A +
Sbjct: 229 FLVEMIESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEK 273
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 191/404 (47%), Gaps = 3/404 (0%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
N + EA+ L +K D+ +Y ++ L +R D N+L+ M K + D+
Sbjct: 184 NKASEAVALVERMVVK--GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 241
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
S V+DS + V A+ + +++ G++ D + + ++ CLC AS L + M
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 260 -KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRI 318
+ K+ NV+T+N +I ++K G+++E E++ E++ P+ +T++ LI G R+
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
D+A ++F M K C PD YN +I+ + + M+ ++ MS N TYT L
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I G ++ +A VF++M+ G+ P+ T + L+ LC G AM++++ +K
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
+ + Y ++ + GK DL+ + G D Y +I+G C G E A
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+ + G P Y+ L L ++ L ++++ R
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCR 585
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 185/379 (48%), Gaps = 1/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D ++ +V L + ++ M +G PDL T V++ + G+ A+ +L
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++E ++ D + V+ LC+ HV A +LF M K + +V TY+ +IS
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ + R+L +++ +P+ +TF+ LI+ + G++ +A ++FD M ++ P+ Y
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N++I+ + DE + + M S +C P++ TY LI+G K++KV D +E+F +M
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR 408
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
RG+V +T T T+ + A M++K+ G ++ Y LL L GK
Sbjct: 409 RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 468
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+ ++ +Q+S D Y + G+C G++E+ + KG P + Y+ + +
Sbjct: 469 AMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMIS 528
Query: 521 KLLASNKLESAYNLFRKIK 539
E AY LF K+K
Sbjct: 529 GFCKKGLKEEAYTLFIKMK 547
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 168/364 (46%), Gaps = 7/364 (1%)
Query: 179 FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNV 238
D ++ +M K P + S ++ + + + I ++E G+ + + N+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 239 VLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG 297
++ CLC+R + A ++ M K +++T N +++G+ ++ E ++ ++V G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 298 FSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECM 357
+ PD++TF+ L+ GL + + +A+ + + M KGC PD Y AVI+ G+ D +
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
M E ++ Y+ +I L K R V DAL +F EM ++GI P T +S + L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYP 474
C+YG A + + ++ + L + F K G L++ L+ EM +
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSL---IDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
+ Y +I G C +L+ A + + K P + Y+ L N + K+ L
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 535 FRKI 538
FR +
Sbjct: 403 FRDM 406
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/484 (22%), Positives = 202/484 (41%), Gaps = 57/484 (11%)
Query: 98 PEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHP 157
P LRG++ L G E N + L LD EA+ LF P
Sbjct: 15 PSFCLRGIYFSGLSYDGYREKLSRNALLHLKLD-------------EAVDLFGEMVKSRP 61
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
+ ++ ++ A+ + K FD + + M GV+ +L T +I+++ R Q+ A
Sbjct: 62 --FPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFA 119
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG 276
+ +LG++ G +LN +L C + A +L + M + + +T+ ++ G
Sbjct: 120 LAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 179
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAG-------------------- 316
+ + E +++ +V +G PD +T+ +I GL + G
Sbjct: 180 LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 239
Query: 317 ---------------RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
+DDA+ +F M KG PD Y+++IS + G + + +
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M PN+ T+ LI K K+ +A ++F+EM+ R I P+ T S + C +
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD---LWHEMQESGYPSDGE 478
A ++ C + Y L ++GF K ++D L+ +M G +
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTL---INGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y +I G +NA +V ++ + G P+ + Y+ L + L + KLE A +F +
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 539 KIAR 542
+ ++
Sbjct: 477 QKSK 480
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 3/236 (1%)
Query: 162 DVKSYNVIVKALGR-RKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQM 220
DV +YN ++ + +K D M + DM++ G+ + T + ++ F +A A +
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGM-ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437
Query: 221 LGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSK 279
++ G+ + + N +L LC+ + A +F + K K+ ++ TYNI+ G K
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G+V + + + +G PD + ++ +I G + G ++A +F MKE G PD+
Sbjct: 498 AGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGT 557
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
YN +I ++ GD + K M S + TY + L R LEV
Sbjct: 558 YNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFLEVL 613
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 181/379 (47%), Gaps = 1/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN IV + R ++L M + V D+ T S ++DS R G + AI +
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+E G+K + N ++ LC+ + L M + ++ NV+T+N+++ + K
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++ E + KE++ G SP+ +T++ L++G R+ +A + D M C PD +
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++I Y V D+ MK ++ +S N TY+ L+ G +S K+ A E+F+EM+
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G++P T L+ LC G A+ +++ +K L + Y ++ + GK
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
+L+ + G + Y +I+GLC G L A +++ + G P+ Y+ L
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 521 KLLASNKLESAYNLFRKIK 539
L L ++ L ++K
Sbjct: 552 AHLRDGDLTASAKLIEEMK 570
Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 167/343 (48%), Gaps = 2/343 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ V +YN +V+ L + ++ +L DM + P++ T ++++D F++ G++ +A
Sbjct: 259 IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEAN 318
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ + G+ + + N ++ C + + A+++ + M + K +++T+ +I G+
Sbjct: 319 ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ +V + +V + I G +++T+S L++G ++G+I A E+F M G PD
Sbjct: 379 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y ++ G ++ ++ ++ + + + YT +I G+ K KV DA +F
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 498
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ +G+ P+ T T + LC G A ++ +K + G + Y L+R G
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
L EM+ G+ +D + VI L + G+L+ + L M
Sbjct: 559 LTASAKLIEEMKSCGFSADASSIKMVIDMLLS-GELDKSFLDM 600
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 164/385 (42%), Gaps = 36/385 (9%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQ---------- 245
P L S + R Q + +LE G+ + +LN+++ C C+
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 246 -----RLHVGAASSLFNS------MKGKV---------------LFNVMTYNIVISGWSK 279
+L ++ FN+ ++GKV +V+TYN +++G +
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 280 LGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNA 339
G +L+++ D T+S +I+ L R G ID AI +F M+ KG
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YN+++ G +++ K M S PN+ T+ L+ +K K+ +A E+++EM+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
RGI P+ T + ++ C A M + C + + L++ +
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ ++ + + G ++ Y ++ G C G+++ A + +E + G P + Y L
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 520 NKLLASNKLESAYNLFRKIKIARQN 544
+ L + KLE A +F ++ ++ +
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMD 470
Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 154/357 (43%), Gaps = 12/357 (3%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDF--GLKFDAESLNVVLWCLCQR 246
M K + +++ L ++ ++ G + +L + F + D S++ C +R
Sbjct: 2 MIKRSITTNMKALRLIQPHLLKTGSLRT--DLLCTISSFFSSCERDFSSISNGNVCFRER 59
Query: 247 LHVGA-------ASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
L G A +LF M + + L +++ ++ S ++ Q + K++ G
Sbjct: 60 LRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI 119
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
+ + T + +I R + A V + + G PDT +N +I G E +
Sbjct: 120 AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 179
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
M C+P++ TY +++G+ +S + AL++ +M +R + T ++ ++ LC
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
G AA+ ++K+ G K S+ Y L+R L GK L +M +
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ ++ G+L+ A + +E + +G P+ + Y+ L + N+L A N+
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 89/211 (42%), Gaps = 7/211 (3%)
Query: 354 DECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSF 413
D+ + ++ M P++ ++R S + ++++ L+ +++ GI + T+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 414 LEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGY 473
+ C A + K K+G + T + L++ L GK + L M E+G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYN 533
D Y ++ G+C G A+ ++ + + YS + + L +++A +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 534 LFRKIK-------IARQNDYARRLWRSKGWH 557
LF++++ + N R L ++ W+
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 183/361 (50%), Gaps = 6/361 (1%)
Query: 149 FFNWAIK---HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
F+++ + + N++ + S+N+++KAL + +F D V M + PD T +M
Sbjct: 170 FYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLM 229
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKV 263
D + ++ +A+ +L ++ G NV++ LC++ + + L ++M KG V
Sbjct: 230 DGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV 289
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
N +TYN +I G G++ + +L+ +V+ P+ +T+ LI GL + R DA+
Sbjct: 290 P-NEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVR 348
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+ +M+E+G + + Y+ +IS G +E M ++ M+ C+PN+ Y+ L+ GL
Sbjct: 349 LLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLC 408
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
+ K +A E+ M+ G +P+ T +S ++ G A+ ++K+ K GC +
Sbjct: 409 REGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKF 468
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
Y +L+ L G G+ + +W +M G D Y +I GLC IG ++ A+ + E
Sbjct: 469 CYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528
Query: 504 L 504
L
Sbjct: 529 L 529
Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 201/424 (47%), Gaps = 12/424 (2%)
Query: 123 VNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYN-----VIVKALGRR- 176
V ++ S VV + + +L +A+ LF + + VKS+N +I + L R
Sbjct: 109 VIIERSFIVVFRAYGKAHLPDKAVDLFHRM-VDEFRCKRSVKSFNSVLNVIINEGLYHRG 167
Query: 177 -KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAES 235
+F+D++ N +M ++P+ + ++V+ + + V +AI++ + + D +
Sbjct: 168 LEFYDYVVNSNMNM---NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYT 224
Query: 236 LNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIV 294
++ LC+ + A L + M+ + + + YN++I G K G + + +++ +
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284
Query: 295 AEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFD 354
+G P+ +T++ LI GL G++D A+ + + M C P+ Y +I+ +
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344
Query: 355 ECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFL 414
+ ++ M N Y+ LISGL K K +A+ ++ +M ++G P+ + +
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404
Query: 415 EPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYP 474
+ LC G P+ A + + GC + Y L++ G C + +W EM ++G
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS 464
Query: 475 SDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNL 534
+ Y +I GLC +G+++ A++V + L G P + YS + L +++A L
Sbjct: 465 RNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524
Query: 535 FRKI 538
+ ++
Sbjct: 525 YHEM 528
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 128/263 (48%), Gaps = 5/263 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV +Y ++ L +++ +LS M + G + + S+++ + G+ +A+
Sbjct: 324 IPNDV-TYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAM 382
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
+ ++ + G K + +V++ LC+ A + N M L N TY+ ++ G+
Sbjct: 383 SLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGF 442
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G E +V KE+ G S + +S LI+GL GR+ +A+ V+ M G PDT
Sbjct: 443 FKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDT 502
Query: 338 NAYNAVISNYISVGDFDECMKYYKGM---SSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
AY+++I +G D +K Y M +P++ TY L+ GL + ++ A+++
Sbjct: 503 VAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDL 562
Query: 395 FEEMLDRGIVPSTGTITSFLEPL 417
MLDRG P T +FL L
Sbjct: 563 LNSMLDRGCDPDVITCNTFLNTL 585
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 120/272 (44%), Gaps = 5/272 (1%)
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
T + +I ++ G +E++L I E +F + G+A D A+++F M
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138
Query: 329 -KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSS----YNCEPNMDTYTRLISGLL 383
E C ++N+V++ I+ G + +++Y + + N PN ++ +I L
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
K R V A+EVF M +R +P T + ++ LC A+++ + + GC S
Sbjct: 199 KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
Y +L+ L G + L M G + Y +I GLC G+L+ AV ++E
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318
Query: 504 LRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ P+ + Y L N L+ + A L
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVRLL 350
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 186/395 (47%), Gaps = 2/395 (0%)
Query: 147 VLFFNW-AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
V+ + W ++ + ++ + N+++ R + L M K G P + T ++
Sbjct: 99 VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVL 264
+ F R +VY A+ M ++ G K + N ++ LC+ V A L N M K +
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+V+TYN +ISG G+ + R++ + PD TF+ LI+ + GR+ +A E
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
++ M + PD Y+ +I DE + + M S C P++ TY+ LI+G K
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
S+KV +++F EM RG+V +T T T ++ C G + A ++++ G ++
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y +LL L GK L + +MQ++G +D Y +I G+C G++ +A +
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+G P Y+ + L A LFRK+K
Sbjct: 459 CQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMK 493
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 151/328 (46%), Gaps = 1/328 (0%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
+ M G P++ + ++D ++ QV A+ +L R+E G+ D + N ++ LC
Sbjct: 173 MFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLC 232
Query: 245 QRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
A+ + + M + ++ +V T+N +I K G+V E E +E++ PD +
Sbjct: 233 SSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIV 292
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T+S LI GL R+D+A E+F M KGC PD Y+ +I+ Y + MK + M
Sbjct: 293 TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM 352
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
S N TYT LI G ++ K+ A E+F M+ G+ P+ T L LC G
Sbjct: 353 SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKI 412
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+++ +K G + Y +++R + G+ D++ + G D Y +
Sbjct: 413 EKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTM 472
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPS 511
+ GL G A + + G P+
Sbjct: 473 MLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 143/280 (51%), Gaps = 1/280 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV +YN ++ L + ++S M K + PD+ T + ++D+ ++ G+V +A
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
+ + L D + +++++ LC + A +F M K F +V+TY+I+I+G+
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K +V ++ E+ G +++T++ LI+G RAG+++ A E+F M G P+
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
YN ++ G ++ + M + ++ TY +I G+ K+ +VADA +++
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCS 456
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
+ +G++P T T+ + L G A +++K ++ G
Sbjct: 457 LNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDG 496
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 100/225 (44%)
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
R ++DD++++F M + P ++ ++S + +D + ++ M N+
Sbjct: 58 RFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLC 117
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
T L++ + +++ AL +M+ G PS T S L C + A+ M+ +
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
+G K ++ Y ++ L + LDL + M++ G D Y +I+GLC+ G+
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+A ++ ++ P ++ L + + ++ A + ++
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 88/195 (45%), Gaps = 6/195 (3%)
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y ++ N I D+ + + M P++ ++RL+S + K +K + ++E+M
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
GI + T L C A+ K K+G + S+ + LL +GF +
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL---NGFCRGD 165
Query: 460 MLLD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
+ D ++ +M GY + IY +I GLC Q++NA+ ++ + G P + Y+
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 517 KLSNKLLASNKLESA 531
L + L +S + A
Sbjct: 226 SLISGLCSSGRWSDA 240
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/169 (15%), Positives = 79/169 (46%)
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
N Y ++ ++ K+ D+L++F M+ +PS + L + + ++
Sbjct: 45 NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLW 104
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
++ + +G +L +LL + + L +M + G+ + ++ G C
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ +A+ + ++ + G+ P+ ++Y+ + + L S ++++A +L +++
Sbjct: 165 DRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRME 213
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 174/356 (48%), Gaps = 5/356 (1%)
Query: 156 HPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY 215
PN+ +Y V+V L +R D N+L+ M + ++ S V+DS +
Sbjct: 222 QPNLV----TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 216 KAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVI 274
A+ + +E+ G++ + + + ++ CLC AS L + M + K+ NV+T+N +I
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCG 334
+ K G++VE E++ E++ PD T+S LI G R+D+A +F+ M K C
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 335 PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEV 394
P+ YN +I+ + DE ++ ++ MS N TYT LI G ++R +A V
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 395 FEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSG 454
F++M+ G+ P+ T + L+ LC G AM++++ ++ + ++ Y +++ +
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 455 FGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCP 510
GK DL+ + G D IY +I+G C G E A + + G P
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 165/348 (47%), Gaps = 36/348 (10%)
Query: 189 MAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLH 248
M + G P+L T +V++ + G + A +L ++E ++ + + V+ LC+ H
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275
Query: 249 VGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSF 307
A +LF M+ K V NV+TY+ +IS + + R+L +++ +P+ +TF+
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 308 LIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYN 367
LI+ + G++ +A +++D M ++ PD Y+++I+ + DE ++ M S +
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 368 CEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM 427
C PN+ TY LI+G K++++ + +E+F EM RG+V +T T T+ + A
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 428 MMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGL 487
M++K+ G ++ Y LL GL
Sbjct: 456 MVFKQMVSDGVHPNIMTYNTLLD-----------------------------------GL 480
Query: 488 CNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
C G+LE A++V E R P+ Y+ + + + K+E ++LF
Sbjct: 481 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 528
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 186/398 (46%), Gaps = 7/398 (1%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+V+ ++ ++ ++ +YN+++ RR +L M K G P + TLS ++
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VL 264
+ + ++ A+ ++ ++ + G + D + ++ L A +L + M +
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
N++TY +V++G K G + +L ++ A + + +S +I+ L + DDA+ +
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F M+ KG P+ Y+++IS + + + + M PN+ T+ LI +K
Sbjct: 283 FTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
K+ +A ++++EM+ R I P T +S + C + A M++ C ++
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402
Query: 445 YKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
Y L ++GF K + ++L+ EM + G + Y +I G +NA +V +
Sbjct: 403 YNTL---INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 459
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + G P+ + Y+ L + L + KLE A +F ++
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 497
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 139/302 (46%), Gaps = 38/302 (12%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF +++ V +V +Y+ ++ L + + +LSDM + +NP++ T +
Sbjct: 278 DALNLF--TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 204 VMDSFIRAGQVYKAIQ-------------------------MLGRLEDFGLKFD------ 232
++D+F++ G++ +A + M RL++ F+
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 233 ----AESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVVEME 287
+ N ++ C+ + LF M + L N +TY +I G+ + +
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 288 RVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
V K++V++G P+ +T++ L++GL + G+++ A+ VF+ ++ P YN +I
Sbjct: 456 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Query: 348 ISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPST 407
G ++ + +S +P++ Y +ISG + +A +F +M + G +P +
Sbjct: 516 CKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Query: 408 GT 409
GT
Sbjct: 576 GT 577
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 102/219 (46%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P F+ L+ + + + D I + + M+ G + YN +I+ + +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
M EP++ T + L++G ++++DA+ + ++M++ G P T T T+ + L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
+ A+ + + + GC+ +L Y +++ L G + +L ++M+ + ++ I
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
Y VI LC ++A+ + E KG P+ + YS L
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 88/203 (43%)
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
Y ++ N + D+ + + GM P++ + +L+S + K +K + + E+M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
GI + T + C A+ + K K+G + S+ LL +
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
+ L +M E GY D + +I GL + AV +++ +++G P+ + Y +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 520 NKLLASNKLESAYNLFRKIKIAR 542
N L ++ A+NL K++ A+
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAK 255
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 185/391 (47%), Gaps = 36/391 (9%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
++ M + G P+ T V++ ++GQ A+++L ++E+ +K DA ++++ LC
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 245 QRLHVGAASSLFNSM------------------------------------KGKVLFNVM 268
+ + A +LFN M K K+ NV+
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
T++++I + K G++ E +++LKE++ G +P+++T++ LI+G + R+++AI++ D M
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
KGC PD +N +I+ Y D+ ++ ++ MS N TY L+ G +S K+
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A ++F+EM+ R + P + L+ LC G A+ ++ K K +L + Y ++
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ + K DL+ + G D Y +I+ LC L A ++ + +G
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGH 574
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P L Y+ L L + +A L ++K
Sbjct: 575 APDELTYNILIRAHLGDDDATTAAELIEEMK 605
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 191/398 (47%), Gaps = 7/398 (1%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+VL ++ +A + + ++++ R + + + + + K G PD + ++
Sbjct: 106 LVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLL 165
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVL 264
+ +V +A++++ R+ + G K +LN ++ LC V A L + M +
Sbjct: 166 NGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQ 225
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
N +TY V++ K GQ +L+++ D++ +S +I+GL + G +D+A +
Sbjct: 226 PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNL 285
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F+ M+ KG D YN +I + + G +D+ K + M PN+ T++ LI +K
Sbjct: 286 FNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
K+ +A ++ +EM+ RGI P+T T S ++ C A+ M GC +
Sbjct: 346 EGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMT 405
Query: 445 YKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ +L ++G+ K + L+L+ EM G ++ Y ++ G C G+LE A + +
Sbjct: 406 FNIL---INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
E + + P + Y L + L + +LE A +F KI+
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 172/345 (49%), Gaps = 2/345 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +YN ++ +D +L DM K ++P++ T S+++DSF++ G++ +A Q+L
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ G+ + + N ++ C+ + A + + M K ++MT+NI+I+G+ K
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
++ + + +E+ G +++T++ L++G ++G+++ A ++F M + PD +Y
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++ G+ ++ ++ + + E ++ Y +I G+ + KV DA ++F +
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G+ + LC A ++++K + G Y +L+R G
Sbjct: 537 KGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATT 596
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+L EM+ SG+P+D + VI L + G+L+ + L M + R
Sbjct: 597 AAELIEEMKSSGFPADVSTVKMVINMLSS-GELDKSFLDMLSTTR 640
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 133/288 (46%), Gaps = 1/288 (0%)
Query: 252 ASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A LF M + + L V+ +N + S +K Q + + K++ ++G + T S +I
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
R ++ A + + G PDT +N +++ E ++ M +P
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
+ T L++GL + KV+DA+ + + M++ G P+ T L +C G AM +
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
+K + KL Y +++ L G +L++EM+ G+ +D Y +I G CN
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 491 GQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G+ ++ ++ + +++ P+ + +S L + + KL A L +++
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 98/224 (43%)
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
+ DDA+++F M + P +N + S ++ + K M S ++ T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+I+ + RK++ A +++ G P T + L LC A+ + + ++
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G K +L L+ L GK + L M E+G+ + Y V+ +C GQ A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
+ ++ + + + YS + + L L++A+NLF +++I
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 291
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 85/214 (39%), Gaps = 37/214 (17%)
Query: 361 KGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD-------------------- 400
+G S+++ + N+ +L SGL+ K DA+++F +M+
Sbjct: 44 RGFSTFS-DRNLSYRDKLSSGLV-GIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKT 101
Query: 401 ---------------RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
+GI S T++ + C A K K+G + +
Sbjct: 102 KQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIF 161
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
LL L + L+L M E G+ ++ GLC G++ +AV++++ +
Sbjct: 162 NTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVE 221
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
GF P+ + Y + N + S + A L RK++
Sbjct: 222 TGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME 255
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 181/379 (47%), Gaps = 1/379 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ +Y +V L +R D ++L M K + D+ + ++D+ V A+ +
Sbjct: 219 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLF 278
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
+++ G++ + + N ++ CLC AS L + M + K+ NV+T++ +I + K
Sbjct: 279 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 338
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G++VE E++ E++ PD T+S LI G R+D+A +F+ M K C P+ Y
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N +I + +E M+ ++ MS N TY LI GL ++ A ++F++M+
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ P T + L+ LC YG A+++++ +K + + Y +++ + GK
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
DL+ + G + IY +I+G C G E A + E G P+ Y+ L
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578
Query: 521 KLLASNKLESAYNLFRKIK 539
L ++ L ++++
Sbjct: 579 ARLRDGDKAASAELIKEMR 597
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 205/465 (44%), Gaps = 71/465 (15%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+V+ +++ ++ D+ SYN+++ RR VL M K G PD+ TLS ++
Sbjct: 98 LVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLL 157
Query: 206 DSFIRAGQV-----------------------------------YKAIQMLGRLEDFGLK 230
+ + ++ +A+ ++ R+ G +
Sbjct: 158 NGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQ 217
Query: 231 FDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKV-------------------------L 264
D + V+ LC+R + A SL M KGK+ L
Sbjct: 218 PDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNL 277
Query: 265 F----------NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
F NV+TYN +I G+ + R+L +++ +P+ +TFS LI+ +
Sbjct: 278 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 337
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G++ +A +++D M ++ PD Y+++I+ + DE ++ M S +C PN+ T
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y LI G K+++V + +E+F EM RG+V +T T + ++ L G A ++KK
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
G + Y +LL L +GK L ++ +Q+S D Y +I G+C G++E
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ + KG P+ ++Y+ + + E A LFR++K
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 194/396 (48%), Gaps = 11/396 (2%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L+K++ KG IE +V + ++ + N N++ +A+ LF + + + +V +
Sbjct: 242 LLKKME-KGKIE-----ADVVIYTTIIDALCNYKNVN-DALNLF--TEMDNKGIRPNVVT 292
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN +++ L + +LSDM + +NP++ T S ++D+F++ G++ +A ++ +
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLGQVV 284
+ D + + ++ C + A +F M K F NV+TYN +I G+ K +V
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
E + +E+ G +++T++ LI+GL +AG D A ++F M G PD Y+ ++
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
G ++ + ++ + EP++ TY +I G+ K+ KV D ++F + +G+
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDL 464
P+ T+ + C G A ++++ ++ G + Y L+R G +L
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592
Query: 465 WHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
EM+ G+ D VI L + G+LE + L M
Sbjct: 593 IKEMRSCGFVGDASTISMVINMLHD-GRLEKSYLEM 627
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 100/227 (44%)
Query: 292 EIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVG 351
E+V P + F+ L+ + + + D I + + M+ D +YN +I+ +
Sbjct: 70 EMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRS 129
Query: 352 DFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTIT 411
+ M EP++ T + L++G +++++A+ + ++M P+T T
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 189
Query: 412 SFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQES 471
+ + L + A+ + + GC+ L Y ++ L G + L L +M++
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 249
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+D IY +I LCN + +A+ + E KG P+ + Y+ L
Sbjct: 250 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Score = 39.3 bits (90), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 33/170 (19%), Positives = 74/170 (43%), Gaps = 1/170 (0%)
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
D +L +L K+ DA+++F EM+ +PS L + + + ++
Sbjct: 46 DYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGER 105
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+ + L +Y +L+ + + L + +M + GY D ++ G C+ +
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 165
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKIAR 542
+ AV ++++ + P+ + ++ L + L NK A L ++ +AR
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRM-VAR 214
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 179/391 (45%), Gaps = 36/391 (9%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
++ M + G P+ T V++ ++GQ A+++L ++E+ +K DA ++++ LC
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 245 QRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWS------------------------- 278
+ + A +LFN M+ K + N++TYNI+I G+
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 279 ----------KLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
K G++ E E + KE++ G +PD++T++ LI+G + +D A ++ D M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
KGC P+ +N +I+ Y D+ ++ ++ MS + TY LI G + K+
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A E+F+EM+ R + P+ T L+ LC G A+ +++K K +L + Y ++
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ + K DL+ + G + Y +I GLC G L A L+ + G
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 574
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P Y+ L L + L ++K
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLIEELK 605
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 193/398 (48%), Gaps = 7/398 (1%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+VL ++ +A ++ + ++++ R + + + + K G P+ T S ++
Sbjct: 106 LVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLI 165
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVL 264
+ G+V +A++++ R+ + G K D ++N ++ LC A L + M +
Sbjct: 166 NGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQ 225
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
N +TY V++ K GQ +L+++ D++ +S +I+GL + G +D+A +
Sbjct: 226 PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNL 285
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F+ M+ KG + YN +I + + G +D+ K + M PN+ T++ LI +K
Sbjct: 286 FNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 345
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
K+ +A E+ +EM+ RGI P T T TS ++ C A M GC ++
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405
Query: 445 YKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ +L ++G+ K + L+L+ +M G +D Y +I G C +G+L A + +
Sbjct: 406 FNIL---INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
E + + P+ + Y L + L + + E A +F KI+
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 171/343 (49%), Gaps = 2/343 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ ++ +YN+++ +D +L DM K +NP++ T S+++DSF++ G++ +A
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ + G+ D + ++ C+ H+ A+ + + M K N+ T+NI+I+G+
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K ++ + + +++ G D++T++ LI+G G+++ A E+F M + P+
Sbjct: 414 CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 473
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y ++ G+ ++ ++ ++ + E ++ Y +I G+ + KV DA ++F
Sbjct: 474 VTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 533
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
+ +G+ P T + LC GP A ++++K + G Y +L+R G G
Sbjct: 534 LPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGD 593
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+ L E++ G+ D + VI L + G+L+ + L M
Sbjct: 594 ATKSVKLIEELKRCGFSVDASTIKMVIDMLSD-GRLKKSFLDM 635
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 98/241 (40%), Gaps = 35/241 (14%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P + FS L + + + D + + M+ KG + + +I+ +
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
+ EPN T++ LI+GL +V++ALE+ + M++ G P TI + + LC
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
G AM++ K + GC+ + Y +L + G+ + ++L +M+E D
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
Y +I GLC G L+NA +NLF +++
Sbjct: 266 YSIIIDGLCKHGSLDNA-----------------------------------FNLFNEME 290
Query: 540 I 540
+
Sbjct: 291 M 291
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 177/381 (46%), Gaps = 6/381 (1%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN ++ + ++ D G PD T ++D G+ +A+ +
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
G+K + N ++ L + + A+ L N M K L V T+NI+++G K+
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM 439
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G V + + ++K ++++G+ PD TF+ LI G ++++A+E+ D M + G PD Y
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
N++++ F++ M+ YK M C PN+ T+ L+ L + RK+ +AL + EEM +
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKN 559
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK---ARKVGCKLSLTAYKLLLRRLSGFGK 457
+ + P T + ++ C G A +++K A KV S Y +++ +
Sbjct: 560 KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSS--STPTYNIIIHAFTEKLN 617
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
M L+ EM + DG Y ++ G C G + + E + GF PS +
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGR 677
Query: 518 LSNKLLASNKLESAYNLFRKI 538
+ N L +++ A + ++
Sbjct: 678 VINCLCVEDRVYEAAGIIHRM 698
Score = 138 bits (348), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 172/374 (45%), Gaps = 1/374 (0%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V SYN I+ L +FD V M G+ PD+ + +I M SF + + + A+++L
Sbjct: 111 VFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLN 170
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLG 281
+ G + + + V+ + LF M V + T+N ++ K G
Sbjct: 171 NMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKG 230
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
V E E++L +++ G P+ T++ I+GL + G +D A+ + + E+G PD YN
Sbjct: 231 DVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYN 290
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+I F E Y M + EP+ TY LI+G K V A + + +
Sbjct: 291 NLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFN 350
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
G VP T S ++ LC G + A+ ++ +A G K ++ Y L++ LS G
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L +EM E G + + + ++ GLC +G + +A +++ + KG+ P ++ L +
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 522 LLASNKLESAYNLF 535
K+E+A +
Sbjct: 471 YSTQLKMENALEIL 484
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 173/378 (45%), Gaps = 1/378 (0%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
++N +++ L ++ +L + K GV P+L T ++ + + G++ A++M+G L
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQV 283
+ G K D + N +++ LC+ A M + L + TYN +I+G+ K G V
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
ER++ + V GF PD T+ LI+GL G + A+ +F+ KG P+ YN +
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I + G E + MS P + T+ L++GL K V+DA + + M+ +G
Sbjct: 398 IKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P T + + A+ + G + Y LL L K +++
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME 517
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ M E G + + ++ LC +L+ A+ ++EE K P + + L +
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577
Query: 524 ASNKLESAYNLFRKIKIA 541
+ L+ AY LFRK++ A
Sbjct: 578 KNGDLDGAYTLFRKMEEA 595
Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 122/306 (39%), Gaps = 40/306 (13%)
Query: 252 ASSLFNSMKGKVLF--NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFL- 308
A +FNSM+ +V F + TY VI G+ ME VL ++ E L ++
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDM-RENVGNHMLEGVYVG 81
Query: 309 -IEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYY------- 360
++ GR G++ +A+ VF+ M C P +YNA++S + G FD+ K Y
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141
Query: 361 ----------------------------KGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
MSS CE N+ Y ++ G + A+
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
E+F +ML G+ T L LC G + K K G +L Y L ++ L
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G+ + + + E G D Y +I GLC + + A + + + + +G P
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 513 LVYSKL 518
Y+ L
Sbjct: 322 YTYNTL 327
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 5/238 (2%)
Query: 297 GFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK-GCGPDTNAYNAVISNYISVGDFDE 355
GF T+ +IE LG G+ + EV M+E G Y + NY G E
Sbjct: 35 GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQE 94
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+ ++ M Y+CEP + +Y ++S L+ S A +V+ M DRGI P + T ++
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 416 PLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL--SGFGKCGMLLDLWHEMQESGY 473
C PHAA+ + GC++++ AY ++ F G +L+ +M SG
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG--YELFGKMLASGV 212
Query: 474 PSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESA 531
+ ++ LC G ++ ++++ +++G P+ Y+ L +L+ A
Sbjct: 213 SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 112/251 (44%), Gaps = 37/251 (14%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V DV +YN ++ L + F+ + M ++G P+L T +I+++S R ++ +A+
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKG--KVLFNVMTYNIVISG 276
+L +++ + DA + ++ C+ + A +LF M+ KV + TYNI+I
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHA 611
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
+++ V E++ +E+V PD T+ +++G + G ++ + M E G
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENG---- 667
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+I P++ T R+I+ L +V +A +
Sbjct: 668 ----------FI---------------------PSLTTLGRVINCLCVEDRVYEAAGIIH 696
Query: 397 EMLDRGIVPST 407
M+ +G+VP
Sbjct: 697 RMVQKGLVPEA 707
Score = 39.3 bits (90), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 8/159 (5%)
Query: 106 FLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKS 165
L+++K K V DA V +D K G+L G A LF + V+ +
Sbjct: 553 LLEEMKNKSVNPDA---VTFGTLIDGFCK---NGDLDG-AYTLFRKMEEAY-KVSSSTPT 604
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN+I+ A + + +M + PD T +++D F + G V + L +
Sbjct: 605 YNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMM 664
Query: 226 DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL 264
+ G +L V+ CLC V A+ + + M K L
Sbjct: 665 ENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGL 703
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 178/391 (45%), Gaps = 36/391 (9%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
++ M + G P+ T V+ ++GQ A+++L ++E+ +K DA ++++ LC
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 245 QRLHVGAASSLFNSM------------------------------------KGKVLFNVM 268
+ + A +LFN M K K+ +V+
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
++ +I + K G++ E E + KE++ G SPD++T++ LI+G + ++D A + D M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
KGCGP+ +N +I+ Y D+ ++ ++ MS + TY LI G + K+
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A E+F+EM+ R + P + L+ LC G P A+ +++K K +L + Y ++
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 449 LRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ + K DL+ + G D + Y +I GLC G L A L+ + G
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 509 CPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
P+ Y+ L L + L +IK
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 190/398 (47%), Gaps = 7/398 (1%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+VL ++ +A ++ + ++++ R + + + + K G PD T S ++
Sbjct: 90 LVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLI 149
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVL 264
+ G+V +A++++ R+ + G K +LN ++ LC V A L + M +
Sbjct: 150 NGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ 209
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
N +TY V+ K GQ +L+++ D++ +S +I+GL + G +D+A +
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNL 269
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F+ M+ KG D Y +I + G +D+ K + M P++ ++ LI +K
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
K+ +A E+ +EM+ RGI P T T TS ++ C A M GC ++
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389
Query: 445 YKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVME 501
+ +L ++G+ K ++ L+L+ +M G +D Y +I G C +G+LE A + +
Sbjct: 390 FNIL---INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 502 ESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
E + + P + Y L + L + + E A +F KI+
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE 484
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 162/340 (47%), Gaps = 2/340 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D+ Y +++ +D +L DM K + PD+ S ++D F++ G++ +A ++
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKL 280
+ G+ D + ++ C+ + A+ + + M K N+ T+NI+I+G+ K
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
+ + + +++ G D++T++ LI+G G+++ A E+F M + PD +Y
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++ G+ ++ ++ ++ + E ++ Y +I G+ + KV DA ++F +
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
+G+ P T + LC G A ++++K + G + Y +L+R G G
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATK 580
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
L E++ G+ D + V+ L + G+L+ + L M
Sbjct: 581 SAKLIEEIKRCGFSVDASTVKMVVDMLSD-GRLKKSFLDM 619
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 168/378 (44%), Gaps = 3/378 (0%)
Query: 132 VGKVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAK 191
V KV+ + + AM L ++ + D Y++I+ L + D N+ ++M
Sbjct: 218 VLKVMCKSGQTALAMELL--RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 192 EGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGA 251
+G D+ + ++ F AG+ ++L + + D + + ++ C + +
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 252 ASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE 310
A L M + + + +TY +I G+ K Q+ + +L +V++G P+ TF+ LI
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 311 GLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEP 370
G +A IDD +E+F M +G DT YN +I + +G + + ++ M S P
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 371 NMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMY 430
++ +Y L+ GL + + ALE+FE++ + G + +C+ A ++
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515
Query: 431 KKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNI 490
G K + Y +++ L G L+ +M+E G+ +G Y +I
Sbjct: 516 CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575
Query: 491 GQLENAVLVMEESLRKGF 508
G + ++EE R GF
Sbjct: 576 GDATKSAKLIEEIKRCGF 593
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 156/362 (43%), Gaps = 9/362 (2%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
++ +M + P L S + R Q + + ++E G+ + +L++++ C
Sbjct: 58 DLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCC 117
Query: 244 CQRLHVGAASSLFNSMKGKVLF-----NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
C+ + A F++M GK++ + +T++ +I+G G+V E ++ +V G
Sbjct: 118 CRCRKLSLA---FSAM-GKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMK 358
P +T + L+ GL G++ DA+ + D M E G P+ Y V+ G M+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 359 YYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLC 418
+ M + + Y+ +I GL K + +A +F EM +G T+ + C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 419 SYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGE 478
G + + K + A+ L+ GK +L EM + G D
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 479 IYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
Y +I G C QL+ A +++ + KG P+ ++ L N +N ++ LFRK+
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 539 KI 540
+
Sbjct: 414 SL 415
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 98/222 (44%)
Query: 319 DDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRL 378
DDA+++F M P ++ + S +D + K M N+ T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 379 ISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGC 438
I+ + RK++ A +++ G P T T ++ + LC G A+ + + ++G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
K +L L+ L GK + L M E+G+ + Y V+ +C GQ A+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
++ + + + YS + + L L++A+NLF +++I
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
>sp|Q9LIL5|PP233_ARATH Putative pentatricopeptide repeat-containing protein At3g15200
OS=Arabidopsis thaliana GN=At3g15200 PE=3 SV=1
Length = 523
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 225/499 (45%), Gaps = 19/499 (3%)
Query: 14 LSSLSSSFSLFSFSTSVRSNLSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPN 73
L L S+ S S+ V + N K N++ L H L L + + + FPN
Sbjct: 10 LFQLQSALSRRRISSLVDFRRVFPPETPNHKNNIT-LSRFHFLG-THFLHSLGAPDKFPN 67
Query: 74 VYKESRSNSVKRIDSSRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVG 133
+ + + D A+D + + RG +K+K L +DL+ ++V
Sbjct: 68 RFNDDK-------DKQSALDVHNIIKHH-RGSSPEKIKR------ILDKCGIDLTEELVL 113
Query: 134 KVVNRGNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEG 193
+VVNR + + +K YN I+ LG+ + F+ V +M+K
Sbjct: 114 EVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRD 173
Query: 194 VNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAAS 253
+ +T ++++ + A +V +A+ + R ++FG+ D + + +L LC+ HV A
Sbjct: 174 GFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAE 233
Query: 254 SLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLG 313
+LF S + + ++ N++++GW LG V E +R K+I+A PD +++ +I L
Sbjct: 234 TLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALT 293
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
+ G++ A+E++ M + PD N VI E ++ ++ +S +PN+
Sbjct: 294 KKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVV 353
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAM-MMYKK 432
TY L+ L K R+ E+ EEM +G S +T L Y + ++ ++
Sbjct: 354 TYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVT--FSYLLKYSQRSKDVDIVLER 411
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
K C+++ Y L+ R + K + ++W EM+ SG D Y I GL G+
Sbjct: 412 MAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGK 471
Query: 493 LENAVLVMEESLRKGFCPS 511
+ A+ +E + KG P
Sbjct: 472 IGEALSYFQEMMSKGMVPE 490
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 111/225 (49%), Gaps = 6/225 (2%)
Query: 188 DMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRL 247
D+ PD+ + ++++ + G++ KA+++ + D D + N V+ LC +
Sbjct: 272 DIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKK 331
Query: 248 HVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEG--FSPDSLT 304
+ A +F + K NV+TYN ++ K+ + ++ +++E+ +G SP+ +T
Sbjct: 332 RIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVT 391
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
FS+L++ R+ +D +E M + C ++ YN + Y+ ++ + + M
Sbjct: 392 FSYLLKYSQRSKDVDIVLE---RMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEME 448
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
P+ TYT I GL K+ +AL F+EM+ +G+VP T
Sbjct: 449 RSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 104/239 (43%), Gaps = 1/239 (0%)
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
S+ ++ +++ LG+ R ++ +VFD M ++ + Y +++ Y + DE + ++
Sbjct: 143 SMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFE 202
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
+ + ++ + L+ L + + V A +F R + L C G
Sbjct: 203 RRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSR-RREFGCDIKAMNMILNGWCVLG 261
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYE 481
H A +K C+ + +Y ++ L+ GK G ++L+ M ++ D +I
Sbjct: 262 NVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICN 321
Query: 482 YVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
VI LC ++ A+ V E KG P+ + Y+ L L + E + L ++++
Sbjct: 322 NVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMEL 380
Score = 35.8 bits (81), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 73/206 (35%), Gaps = 38/206 (18%)
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YN ++ + F+E + + MS + N TY L++ + KV +A+ VFE
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMY-KKARKVGCKLSLTAYKLLLRRLSGFGKC 458
+ GI L LC Y A ++ + R+ GC +
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAM--------------- 250
Query: 459 GMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
M+L+ W C +G + A ++ + P + Y +
Sbjct: 251 NMILNGW----------------------CVLGNVHEAKRFWKDIIASKCRPDVVSYGTM 288
Query: 519 SNKLLASNKLESAYNLFRKIKIARQN 544
N L KL A L+R + R+N
Sbjct: 289 INALTKKGKLGKAMELYRAMWDTRRN 314
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 186/395 (47%), Gaps = 1/395 (0%)
Query: 146 MVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
+V++ +++ ++ D+ S+ +++ R +L M K G P + TL ++
Sbjct: 97 IVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLL 156
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VL 264
+ F + + +A+ ++ ++ FG + N V+ LC+ + A +F M+ K +
Sbjct: 157 NGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIR 216
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+ +TYN +ISG S G+ + R+L+++V P+ + F+ LI+ + G + +A +
Sbjct: 217 ADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNL 276
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
+ M + P+ YN++I+ + G + + M S C P++ TY LI+G K
Sbjct: 277 YKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCK 336
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
S++V D +++F EM +G+V T + + C G + A ++ + G +
Sbjct: 337 SKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVT 396
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y +LL L GK L + ++Q+S D Y +I GLC +L+ A +
Sbjct: 397 YNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 456
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
RKG P + Y + + L A L R++K
Sbjct: 457 RKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491
Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 146/300 (48%), Gaps = 1/300 (0%)
Query: 152 WAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRA 211
+ ++ + D +YN ++ L + +L DM K ++P++ + ++D+F++
Sbjct: 208 YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 267
Query: 212 GQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTY 270
G + +A + + + + + N ++ C +G A +F+ M K F +V+TY
Sbjct: 268 GNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY 327
Query: 271 NIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKE 330
N +I+G+ K +V + ++ E+ +G D+ T++ LI G +AG+++ A +VF+ M +
Sbjct: 328 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 387
Query: 331 KGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVAD 390
G PD YN ++ + G ++ + + + + ++ TY +I GL ++ K+ +
Sbjct: 388 CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 447
Query: 391 ALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLR 450
A +F + +G+ P + + LC G A + ++ ++ G S Y LR
Sbjct: 448 AWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 96/189 (50%), Gaps = 1/189 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN ++ + K + + +M +G+ D T + ++ + +AG++ A ++
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKL 280
R+ D G+ D + N++L CLC + A + + K ++ +++TYNI+I G +
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
++ E + + + +G PD++ + +I GL R G +A ++ MKE G P Y
Sbjct: 443 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Query: 341 NAVISNYIS 349
+ + ++ +
Sbjct: 503 DETLRDHYT 511
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 99/222 (44%)
Query: 317 RIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
+ DDA +F M + P + V++ + FD + Y M + ++ ++T
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
LI + +++ AL + +M+ G PS T+ S L C A+ +
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
G ++ Y ++ L L++++ M++ G +D Y +I+GL N G+ +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 497 VLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++ + +++ P+ + ++ L + + L A NL++++
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 280
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/236 (18%), Positives = 90/236 (38%)
Query: 300 PDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKY 359
P + F+ ++ + + + D I ++ M+ G D ++ +I + +
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 360 YKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCS 419
M P++ T L++G + + +A+ + + M G VP+ + + LC
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 420 YGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEI 479
+ A+ ++ K G + Y L+ LS G+ L +M + +
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 480 YEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ +I G L A + +E +R+ P+ Y+ L N L A +F
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 312
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 86/221 (38%), Gaps = 12/221 (5%)
Query: 330 EKGCGPDT------------NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
E+G P+T + Y + N + FD+ + M P++ +TR
Sbjct: 25 ERGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTR 84
Query: 378 LISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG 437
+++ + K K + ++ +M + GI + T + C A+ + K K+G
Sbjct: 85 VLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLG 144
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
+ S+ LL + + L M G+ + IY VI GLC L NA+
Sbjct: 145 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 204
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
V +KG + Y+ L + L S + A L R +
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM 245
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 181/376 (48%), Gaps = 4/376 (1%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
EAM LF +K V++Y V++K+L + N++ +M + G+ P++ T ++
Sbjct: 306 EAMDLFVK--MKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++DS + KA ++LG++ + GL + + N ++ C+R + A + M+ +
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 264 LF-NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
L N TYN +I G+ K V + VL +++ PD +T++ LI+G R+G D A
Sbjct: 424 LSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+ M ++G PD Y ++I + +E + + PN+ YT LI G
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
K+ KV +A + E+ML + +P++ T + + LC+ G A ++ +K K+G + ++
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
+ +L+ RL G + +M SG D Y I C G+L +A +M +
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662
Query: 503 SLRKGFCPSRLVYSKL 518
G P YS L
Sbjct: 663 MRENGVSPDLFTYSSL 678
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 176/407 (43%), Gaps = 32/407 (7%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
+L + + F +W ++P V SY ++ L + + + M K
Sbjct: 100 DLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKS------- 152
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
DS A V + + + E F LK+ +++ C L+ A L + M
Sbjct: 153 -----CDSVGDALYVLDLCRKMNKDERFELKY-----KLIIGCYNTLLNSLARFGLVDEM 202
Query: 260 K--------GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEG 311
K KV N+ TYN +++G+ KLG V E + + +IV G PD T++ LI G
Sbjct: 203 KQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMG 262
Query: 312 LGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPN 371
+ +D A +VF+ M KGC + AY +I DE M + M C P
Sbjct: 263 YCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPT 322
Query: 372 MDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYK 431
+ TYT LI L S + ++AL + +EM + GI P+ T T ++ LCS A +
Sbjct: 323 VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 382
Query: 432 KARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIAGLC 488
+ + G ++ Y L ++G+ K GM+ +D+ M+ + Y +I G C
Sbjct: 383 QMLEKGLMPNVITYNAL---INGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC 439
Query: 489 NIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
+ A+ V+ + L + P + Y+ L + S +SAY L
Sbjct: 440 K-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 170/397 (42%), Gaps = 20/397 (5%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D +Y ++ +L + K + C++ + ++GVNP++ + ++D + +AG+V +A
Sbjct: 493 LVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH 552
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
ML ++ ++ + N ++ LC + A+ L M K + V T I+I
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRL 612
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G +++++ G PD+ T++ I+ R GR+ DA ++ M+E G PD
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 672
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSR----------- 386
Y+++I Y +G + K M CEP+ T+ LI LL+ +
Sbjct: 673 FTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPEL 732
Query: 387 -------KVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK-ARKVGC 438
+ +E+ E+M++ + P+ + + +C G A ++ R G
Sbjct: 733 CAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGI 792
Query: 439 KLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVL 498
S + LL K + +M G+ E + +I GL G+ E
Sbjct: 793 SPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTS 852
Query: 499 VMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
V + L+ G+ L + + + + +E+ Y LF
Sbjct: 853 VFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELF 889
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 120/289 (41%), Gaps = 17/289 (5%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +Y ++ R ++++ M + GV+PDL T S ++ + GQ A +L
Sbjct: 636 DAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVL 695
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLG 281
R+ D G + S + L + L + + + + N+M ++ V+
Sbjct: 696 KRMRDTGCE---PSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVV------- 745
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM-KEKGCGPDTNAY 340
+L+++V +P++ ++ LI G+ G + A +VFD M + +G P +
Sbjct: 746 ------ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVF 799
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
NA++S + +E K M P +++ LI GL K + VF+ +L
Sbjct: 800 NALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ 859
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLL 449
G ++ + G A ++ K GCK S Y LL+
Sbjct: 860 CGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 470 ESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLE 529
E+G D Y +I G C L++A V E KG + + Y+ L + L + +++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 530 SAYNLFRKIK 539
A +LF K+K
Sbjct: 306 EAMDLFVKMK 315
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 193/430 (44%), Gaps = 55/430 (12%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRK-FFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+K + DV +YNVI++ + R + FF V ++M K +P+L T I+MD + G
Sbjct: 153 MKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKG 212
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYN 271
+ A +M + G+ + + +++ LCQR A LF M+ + + + +N
Sbjct: 213 RTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHN 272
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGF--------------------------------- 298
++ G+ KLG++VE +L+ +GF
Sbjct: 273 ALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK 332
Query: 299 --SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDEC 356
PD + ++ LI+GL +AG+I+DA+++ +M KG PDT YNAVI G +E
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEG 392
Query: 357 MKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEP 416
MS P+ T+T LI + ++ V +A E+F E+ G PS T + ++
Sbjct: 393 RSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDG 452
Query: 417 LCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG--------KCGMLLDLWHEM 468
LC G K+AR + K+ + L RLS G + G +L + ++
Sbjct: 453 LCKSGE-------LKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDL 505
Query: 469 ---QESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLAS 525
++G D Y +I G C G ++ A+ ++ KG P + Y+ L N L
Sbjct: 506 AHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRV 565
Query: 526 NKLESAYNLF 535
+ E A+ LF
Sbjct: 566 GREEEAFKLF 575
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 208/462 (45%), Gaps = 4/462 (0%)
Query: 99 EERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPN 158
E + G + L K IE AL + LS +++ V+ + ++ + FF WA +
Sbjct: 30 EFNISGEVISILAKKKPIEPALEPLVPFLSKNIITSVI-KDEVNRQLGFRFFIWASRR-E 87
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ +S+ +++ L D L ++ GV+ D +++ ++ + G KA+
Sbjct: 88 RLRSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAV 147
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLC-QRLHVGAASSLFNSM-KGKVLFNVMTYNIVISG 276
+ GR+++F + D + NV+L + + + A +++N M K N+ T+ I++ G
Sbjct: 148 ESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDG 207
Query: 277 WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPD 336
K G+ + +++ ++ G SP+ +T++ LI GL + G DDA ++F M+ G PD
Sbjct: 208 LYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPD 267
Query: 337 TNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFE 396
+ A+NA++ + +G E + + + Y+ LI GL ++R+ A E++
Sbjct: 268 SVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYA 327
Query: 397 EMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFG 456
ML + I P T ++ L G A+ + G Y +++ L G G
Sbjct: 328 NMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRG 387
Query: 457 KCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYS 516
L EM E+ D + +I +C G + A + E + G PS ++
Sbjct: 388 LLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFN 447
Query: 517 KLSNKLLASNKLESAYNLFRKIKIARQNDYARRLWRSKGWHF 558
L + L S +L+ A L K+++ R RL S F
Sbjct: 448 ALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSF 489
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 193/462 (41%), Gaps = 55/462 (11%)
Query: 98 PEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHP 157
P+ L + +Q L G IEDAL ++ + ++G
Sbjct: 336 PDIILYTILIQGLSKAGKIEDAL---------KLLSSMPSKG------------------ 368
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
++ D YN ++KAL R + ++ +M++ PD T +I++ S R G V +A
Sbjct: 369 -ISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREA 427
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQ------------RLHVGAASSLFN--SMKGKV 263
++ +E G + N ++ LC+ ++ VG +SLF S G
Sbjct: 428 EEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNR 487
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
F+ M + G +++ R L G SPD ++++ LI G RAG ID A++
Sbjct: 488 SFDTMVES---------GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALK 538
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+ + ++ KG PD+ YN +I+ VG +E K + + P + Y L++
Sbjct: 539 LLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV--YRSLMTWSC 596
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
+ RKV A ++ + L + I + +E G A+ + +L+L
Sbjct: 597 RKRKVLVAFNLWMKYLKK-ISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLG 655
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEES 503
Y + L L G+ L ++ ++E +I GLC QL+ A+ V +
Sbjct: 656 PYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYT 715
Query: 504 LRKGF-CPSRLVYSKLSNKLLASNKLESAYNLFRKIKIARQN 544
L F R+ LS+ L ++ K+E L +++ A N
Sbjct: 716 LDNNFKLMPRVCNYLLSSLLESTEKMEIVSQLTNRMERAGYN 757
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 145 bits (366), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 181/380 (47%), Gaps = 2/380 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D ++ +V L + ++ M +G PDL T V++ + G+ A+ +L
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
++E ++ D N ++ LC+ H+ A LFN M+ K + +V TYN +IS
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM-KEKGCGPDTNA 339
G+ + R+L +++ + +PD + F+ LI+ + G++ +A +++D M K K C PD A
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 340 YNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEML 399
YN +I + +E M+ ++ MS N TYT LI G ++R +A VF++M+
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 400 DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCG 459
G+ P T L+ LC+ G A+++++ +K KL + Y ++ L GK
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478
Query: 460 MLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLS 519
DL+ + G + Y +++G C G E A + E G P+ Y+ L
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Query: 520 NKLLASNKLESAYNLFRKIK 539
L ++ L ++++
Sbjct: 539 RARLRDGDEAASAELIKEMR 558
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 155/353 (43%), Gaps = 37/353 (10%)
Query: 185 VLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLC 244
++ M + G PD T + ++ + + +A+ ++ R+ G + D + V+ LC
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 226
Query: 245 QRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
+R A +L N M KGK+ +V+ YN +I G K + + + ++ +G PD
Sbjct: 227 KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T++ LI L GR DA + M EK PD +NA+I ++ G E K Y M
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Query: 364 -SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
S +C P++ Y LI G K ++V + +EVF EM RG+V +T T T+ +
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
A M++K +M G D Y
Sbjct: 407 CDNAQMVFK-----------------------------------QMVSDGVHPDIMTYNI 431
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
++ GLCN G +E A++V E ++ + Y+ + L + K+E ++LF
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF 484
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 170/396 (42%), Gaps = 37/396 (9%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF + P + ++ ++ A+ + FD + ++ M G++ +L T SI
Sbjct: 58 DAIGLFGDMVKSRP--FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKV 263
++ F R Q+ A+ +LG++ G +LN +L C + A +L +
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD------ 169
Query: 264 LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIE 323
Q+VEM G+ PD++TF+ L+ GL + + +A+
Sbjct: 170 ------------------QMVEM----------GYQPDTVTFTTLVHGLFQHNKASEAVA 201
Query: 324 VFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLL 383
+ + M KGC PD Y AVI+ G+ D + M E ++ Y +I GL
Sbjct: 202 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLC 261
Query: 384 KSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLT 443
K + + DA ++F +M +GI P T + LC+YG A + + L
Sbjct: 262 KYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLV 321
Query: 444 AYKLLLRRLSGFGKCGMLLDLWHEMQESGYP-SDGEIYEYVIAGLCNIGQLENAVLVMEE 502
+ L+ GK L+ EM +S + D Y +I G C ++E + V E
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE 381
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
++G + + Y+ L + + ++A +F+++
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 417
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 170/398 (42%), Gaps = 40/398 (10%)
Query: 140 NLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLE 199
N + EA+ L +K D+ +Y ++ L +R D N+L+ M K + D+
Sbjct: 194 NKASEAVALVERMVVK--GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 251
Query: 200 TLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM 259
+ ++D + + A + ++E G+K D + N ++ CLC AS L + M
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 260 KGK------VLFN-------------------------------VMTYNIVISGWSKLGQ 282
K V FN V+ YN +I G+ K +
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 283 VVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNA 342
V E V +E+ G +++T++ LI G +A D+A VF M G PD YN
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 343 VISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRG 402
++ + G+ + + ++ M + + ++ TYT +I L K+ KV D ++F + +G
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 403 IVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLL 462
+ P+ T T+ + C G A ++ + ++ G + Y L+R G
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASA 551
Query: 463 DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVM 500
+L EM+ G+ D + ++ + + G+L+ + L M
Sbjct: 552 ELIKEMRSCGFAGDASTFG-LVTNMLHDGRLDKSFLDM 588
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 134/295 (45%), Gaps = 1/295 (0%)
Query: 245 QRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
Q L + A LF M K + +++ ++ ++S +K+ + + + +++ G S +
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T+S I R ++ A+ + M + G GP N++++ + E + M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
+P+ T+T L+ GL + K ++A+ + E M+ +G P T + + LC G P
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A+ + K K + + Y ++ L + DL+++M+ G D Y +
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
I+ LCN G+ +A ++ + L K P + ++ L + + KL A L+ ++
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/183 (18%), Positives = 78/183 (42%), Gaps = 6/183 (3%)
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+ + G SS +C N L +L+ K+ DA+ +F +M+ PS + L +
Sbjct: 32 RSFAGASSDDCREN------LSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAI 85
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
+ + ++ + +G +L Y + + + + L + +M + GY
Sbjct: 86 AKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSI 145
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
++ G C+ ++ AV ++++ + G+ P + ++ L + L NK A L +
Sbjct: 146 VTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVER 205
Query: 538 IKI 540
+ +
Sbjct: 206 MVV 208
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 182/417 (43%), Gaps = 42/417 (10%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV SY+ +V R D + ++ M ++G+ P+ ++ R ++ +A +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+ G+ D ++ C+R + AAS F M + + +V+TY +ISG+ ++
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G +VE ++ E+ +G PDS+TF+ LI G +AG + DA V + M + GC P+ Y
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+I GD D + M +PN+ TY +++GL KS + +A+++ E
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G+ T T T+ ++ C G A + K+ G + ++ + +L+ +GF GM
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM---NGFCLHGM 576
Query: 461 LLD--------------------------------------LWHEMQESGYPSDGEIYEY 482
L D ++ +M G DG+ YE
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
++ G C ++ A + +E KGF S YS L L K A +F +++
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 205/454 (45%), Gaps = 19/454 (4%)
Query: 99 EERLRGVFLQKLKGKGVIEDA------LWNVNVDLSLDVVGKVVNRGNL----SGEAMVL 148
+ R+ VF Q L G++ +A + N + LS+D + R + + A+++
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 149 FFNWAIKHPNVAKDVKSYNVIVK---ALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVM 205
F + V +V SYN+++ LGR K ++L M +G PD+ + S V+
Sbjct: 234 FREFP--EVGVCWNVASYNIVIHFVCQLGRIKEAH---HLLLLMELKGYTPDVISYSTVV 288
Query: 206 DSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVL 264
+ + R G++ K +++ ++ GLK ++ ++ LC+ + A F+ M + +L
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 265 FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEV 324
+ + Y +I G+ K G + + E+ + +PD LT++ +I G + G + +A ++
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 325 FDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLK 384
F M KG PD+ + +I+ Y G + + + M C PN+ TYT LI GL K
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 385 SRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTA 444
+ A E+ EM G+ P+ T S + LC G A+ + + G
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 445 YKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESL 504
Y L+ G+ ++ EM G + ++ G C G LE+ ++ L
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 505 RKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
KG P+ ++ L + N L++A +++ +
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 156/366 (42%), Gaps = 7/366 (1%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D Y ++ +R +M + PD+ T + ++ F + G + +A
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVISGW 277
++ + GL+ D+ + ++ C+ H+ A + N M + NV+TY +I G
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
K G + +L E+ G P+ T++ ++ GL ++G I++A+++ + G DT
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y ++ Y G+ D+ + K M +P + T+ L++G + D ++
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
ML +GI P+ T S ++ C AA +YK G Y+ L++ G K
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK---GHCK 643
Query: 458 CGMLLDLW---HEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLV 514
+ + W EM+ G+ Y +I G + A V ++ R+G + +
Sbjct: 644 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEI 703
Query: 515 YSKLSN 520
+ S+
Sbjct: 704 FDFFSD 709
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 160/337 (47%), Gaps = 7/337 (2%)
Query: 150 FNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFI 209
F + + ++ DV +Y I+ + + +M +G+ PD T + +++ +
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 210 RAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVM 268
+AG + A ++ + G + + ++ LC+ + +A+ L + M K + N+
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 269 TYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTM 328
TYN +++G K G + E +++ E A G + D++T++ L++ ++G +D A E+ M
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 329 KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKV 388
KG P +N +++ + G ++ K M + PN T+ L+ +
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 389 ADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLL 448
A ++++M RG+ P T + ++ C A ++++ + G +S++ Y +L
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Query: 449 LRRLSGFGKCGMLL---DLWHEMQESGYPSDGEIYEY 482
++ GF K L +++ +M+ G +D EI+++
Sbjct: 673 IK---GFLKRKKFLEAREVFDQMRREGLAADKEIFDF 706
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 123/283 (43%), Gaps = 6/283 (2%)
Query: 124 NVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIK-HPNVAKDVKSYNVIVKALGRRKFFDFM 182
NV ++ + G+L +L W I PN+ +YN IV L + +
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF----TYNSIVNGLCKSGNIEEA 510
Query: 183 CNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWC 242
++ + G+N D T + +MD++ ++G++ KA ++L + GL+ + NV++
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 243 LCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
C + L N M K + N T+N ++ + + + K++ + G PD
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYK 361
T+ L++G +A + +A +F MK KG + Y+ +I ++ F E + +
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
M + + + K ++ ++ +E+++ +V
Sbjct: 691 QMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 733
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 413 FLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLS-GFGKCGMLLDLWHEMQES 471
F + L +G A +++K G LS+ + + L RLS K + ++ E E
Sbjct: 181 FFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEV 240
Query: 472 GYPSDGEIYEYVIAGLCNIGQLENA---VLVMEESLRKGFCPSRLVYSKLSNKLLASNKL 528
G + Y VI +C +G+++ A +L+ME KG+ P + YS + N +L
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME---LKGYTPDVISYSTVVNGYCRFGEL 297
Query: 529 ESAYNLFRKIK 539
+ + L +K
Sbjct: 298 DKVWKLIEVMK 308
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 166/366 (45%), Gaps = 1/366 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K ++ + ++N ++K L + + NVL +M G PD T SI+ D + +
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNI 272
A+ + D G+K +A + +++L LC+ + A + K L N + YN
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNT 394
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G+ + G +V ++ + +G PD L ++ LI G +++A + + MK KG
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
P YN +I Y +FD+C K M PN+ +Y LI+ L K K+ +A
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
V +M DRG+ P ++ CS G A K+ K G +L+L Y L+ L
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
S GK DL E+ G D Y +I+G G ++ + + EE R G P+
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTL 634
Query: 513 LVYSKL 518
Y L
Sbjct: 635 KTYHLL 640
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 208/492 (42%), Gaps = 23/492 (4%)
Query: 32 SNLSYNELLSNQKKNMSSLDEHHVLKELSDLFQISSHNSFPNVYKESRSNSVKRID---S 88
S +++N LL K D +VLKE+ DL + +F ++ SN
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVY 342
Query: 89 SRAVDEFLLPEERLRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVV----------NR 138
AVD + + L L +G IE A + +++ +V V +
Sbjct: 343 ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRK 402
Query: 139 GNLSGEAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDL 198
G+L G M + A++ + D +YN +++ + ++ M +GV+P +
Sbjct: 403 GDLVGARMKI---EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSV 459
Query: 199 ETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNS 258
ET +I++ + R + K +L +ED G + S ++ CLC+ + A +
Sbjct: 460 ETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRD 519
Query: 259 MKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGR 317
M+ + V V YN++I G G++ + R KE++ +G + +T++ LI+GL G+
Sbjct: 520 MEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGK 579
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
+ +A ++ + KG PD YN++IS Y G+ C+ Y+ M +P + TY
Sbjct: 580 LSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHL 639
Query: 378 LISGLLKSRKVADALEVFEEML-DRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
LIS K + +E+ E + + + P L +G A + K+ +
Sbjct: 640 LISLCTK-----EGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEK 694
Query: 437 GCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENA 496
L T Y L+ GK + L EM + + Y ++ G C + +A
Sbjct: 695 SIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSA 754
Query: 497 VLVMEESLRKGF 508
+ E KGF
Sbjct: 755 YVWYREMQEKGF 766
Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 162/393 (41%), Gaps = 35/393 (8%)
Query: 148 LFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDS 207
LF +++ P++ D SY ++ L K ++ + EG+ P ++L++++D
Sbjct: 95 LFSAFSLSSPSLKHDF-SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDH 153
Query: 208 FIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNV 267
++ Q I + + + + + + VG LFN MK ++
Sbjct: 154 LVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIY-- 211
Query: 268 MTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDT 327
P ++ LI+GL + R++DA ++FD
Sbjct: 212 --------------------------------PSVFIYNVLIDGLCKGKRMNDAEQLFDE 239
Query: 328 MKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRK 387
M + P YN +I Y G+ ++ K + M + + EP++ T+ L+ GL K+
Sbjct: 240 MLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGM 299
Query: 388 VADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKL 447
V DA V +EM D G VP T + + S AA+ +Y+ A G K++ +
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 448 LLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKG 507
LL L GK ++ G + IY +I G C G L A + +E ++G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 508 FCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
P L Y+ L + ++E+A K+K+
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 157/382 (41%), Gaps = 69/382 (18%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K V+ V++YN+++ GR+ FD ++L +M G P++ + +++ + +
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNI 272
+ +A + +ED G+ N+++ C + + A M K + N++TYN
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I G S G++ E E +L EI +G PD T++ LI G G AG + I +++ MK G
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 333 --------------CG-----------------PDTNAYNAVISNYISVGDFDECMKYYK 361
C PD YN V+ Y GD ++ K
Sbjct: 630 IKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQK 689
Query: 362 GMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYG 421
M + + TY LI G LK K+ + + +EM R + P T ++ C
Sbjct: 690 QMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCE-- 747
Query: 422 PPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWH-EMQESGYPSDGEIY 480
K ++AY +W+ EMQE G+ D I
Sbjct: 748 ----------------VKDYMSAY------------------VWYREMQEKGFLLDVCIG 773
Query: 481 EYVIAGLCNIGQLENAVLVMEE 502
+++GL + + A +V+ E
Sbjct: 774 NELVSGLKEEWRSKEAEIVISE 795
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 112/237 (47%), Gaps = 3/237 (1%)
Query: 165 SYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRL 224
+YN ++ L ++L +++++G+ PD+ T + ++ + AG V + I + +
Sbjct: 566 TYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEM 625
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVV 284
+ G+K ++ ++ L LC + + LF M K +++ YN V+ ++ G +
Sbjct: 626 KRSGIKPTLKTYHL-LISLCTKEGIELTERLFGEMSLKP--DLLVYNGVLHCYAVHGDME 682
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
+ + K+++ + D T++ LI G + G++ + + D M + P+ + YN ++
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
+ V D+ +Y+ M ++ L+SGL + + +A V EM R
Sbjct: 743 KGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGR 799
Score = 33.9 bits (76), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 126/336 (37%), Gaps = 64/336 (19%)
Query: 55 VLKELSD---LFQISSHNSFPNVY----KESRSNSVKRIDSSRAVDEFLLPEERLRGVFL 107
+LKE+ D + + S+ + N K + VKR R V P+ R+ + +
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVS----PKVRIYNMLI 536
Query: 108 QKLKGKGVIEDA------LWNVNVDLSLDVVGKVVNRGNLSG---EAMVLFFNWAIKHPN 158
KG IEDA + ++L+L +++ +++G EA L I
Sbjct: 537 DGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE--ISRKG 594
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ DV +YN ++ G + +M + G+ P L+T +++ + G I
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-----I 649
Query: 219 QMLGRL-EDFGLKFDAESLNVVLWC--------------------------------LCQ 245
++ RL + LK D N VL C +
Sbjct: 650 ELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILG 709
Query: 246 RLHVGA---ASSLFNSMKGKVL-FNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPD 301
+L VG SL + M + + TYNI++ G ++ + +E+ +GF D
Sbjct: 710 QLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLD 769
Query: 302 SLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ L+ GL R +A V M + G T
Sbjct: 770 VCIGNELVSGLKEEWRSKEAEIVISEMNGRMLGDVT 805
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 181/385 (47%), Gaps = 13/385 (3%)
Query: 153 AIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAG 212
+I+ + ++SYN+ ++ L R F VL M +G+ P + + +I+MD + G
Sbjct: 316 SIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLG 375
Query: 213 QVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYN 271
+ A ++G ++ G+ DA + +L C V AA SL M + L N T N
Sbjct: 376 MLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCN 435
Query: 272 IVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEK 331
I++ K+G++ E E +L+++ +G+ D++T + +++GL +G +D AIE+ M+
Sbjct: 436 ILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVH 495
Query: 332 GCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
G N N+ YI + D + NC P++ TY+ L++GL K+ + A+A
Sbjct: 496 GSAALGNLGNS----YIGLVD--------DSLIENNCLPDLITYSTLLNGLCKAGRFAEA 543
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+F EM+ + P + F+ C G +A + K K GC SL Y L+
Sbjct: 544 KNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILG 603
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
L + + L EM+E G + Y I LC ++E+A +++E ++K P+
Sbjct: 604 LGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPN 663
Query: 512 RLVYSKLSNKLLASNKLESAYNLFR 536
+ L + A +F
Sbjct: 664 VFSFKYLIEAFCKVPDFDMAQEVFE 688
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 178/402 (44%), Gaps = 28/402 (6%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN IV + R D ++ M +EG+ PD+ T + + + + G+V A ++ +E
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279
Query: 226 ---DFGL-KFDAESLNVVLWCLCQRLHVGAASSLFNSMK-GKVLFNVMTYNIVISGWSKL 280
GL + ++ + N++L C+ + A +LF S++ L ++ +YNI + G +
Sbjct: 280 LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRH 339
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G+ +E E VLK++ +G P +++ L++GL + G + DA + MK G PD Y
Sbjct: 340 GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
++ Y SVG D + M NC PN T L+ L K ++++A E+ +M +
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE 459
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG----------------------- 437
+G T T ++ LC G A+ + K R G
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENN 519
Query: 438 CKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAV 497
C L Y LL L G+ +L+ EM D Y I C G++ +A
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAF 579
Query: 498 LVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
V+++ +KG S Y+ L L N++ + L ++K
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMK 621
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 164/379 (43%), Gaps = 25/379 (6%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K V D +Y ++ D ++L +M + P+ T +I++ S + G+
Sbjct: 387 MKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGR 446
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLC--------------QRLHVGAA-SSLFNS 258
+ +A ++L ++ + G D + N+++ LC R+H AA +L NS
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506
Query: 259 MKGKV---------LFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLI 309
G V L +++TY+ +++G K G+ E + + E++ E PDS+ ++ I
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI 566
Query: 310 EGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCE 369
+ G+I A V M++KGC YN++I E M
Sbjct: 567 HHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGIS 626
Query: 370 PNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMM 429
PN+ TY I L + KV DA + +EM+ + I P+ + +E C A +
Sbjct: 627 PNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEV 686
Query: 430 YKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCN 489
++ A + C Y L+ L G+ +L + + G+ +Y+ ++ LC
Sbjct: 687 FETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCK 745
Query: 490 IGQLENAVLVMEESLRKGF 508
+LE A ++ + + +G+
Sbjct: 746 KDELEVASGILHKMIDRGY 764
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 187/460 (40%), Gaps = 99/460 (21%)
Query: 144 EAMVLFFNWAIKH---PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLET 200
E V F +W K +A ++N++++AL D + +M ++G P+ T
Sbjct: 125 ERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFT 184
Query: 201 LSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMK 260
I++ + +AG K +++L +E FG
Sbjct: 185 FGILVRGYCKAGLTDKGLELLNAMESFG-------------------------------- 212
Query: 261 GKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDD 320
VL N + YN ++S + + G+ + E++++++ EG PD +TF+ I L + G++ D
Sbjct: 213 --VLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLD 270
Query: 321 AIEVFDTMK-EKGCG---PDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYT 376
A +F M+ ++ G P++ YN ++ + VG ++ ++ + + ++ +Y
Sbjct: 271 ASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYN 330
Query: 377 RLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV 436
+ GL++ K +A V ++M D+GI PS + ++ LC G A + ++
Sbjct: 331 IWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRN 390
Query: 437 GCKLSLTAYKLLLRRLSGFGK----------------------CGMLL------------ 462
G Y LL GK C +LL
Sbjct: 391 GVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEA 450
Query: 463 -DLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV---------------------- 499
+L +M E GY D ++ GLC G+L+ A+ +
Sbjct: 451 EELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGL 510
Query: 500 MEESLRKGFC-PSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+++SL + C P + YS L N L + + A NLF ++
Sbjct: 511 VDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM 550
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 140/333 (42%), Gaps = 42/333 (12%)
Query: 248 HVGAASSLFNSMKGKVLFN---VMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLT 304
H+ A F ++ + N V YN+++ K +V + + K++V G +P + T
Sbjct: 90 HIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYT 149
Query: 305 FSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMS 364
F+ LI L + +D A E+FD M EKGC P+ + ++ Y G D+ ++ M
Sbjct: 150 FNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAME 209
Query: 365 SYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP-- 422
S+ PN Y ++S + + D+ ++ E+M + G+VP T S + LC G
Sbjct: 210 SFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVL 269
Query: 423 -----------------PHAAMMMYKKARKVGCKL--------------------SLTAY 445
P + Y K CK+ SL +Y
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSY 329
Query: 446 KLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLR 505
+ L+ L GK + +M + G Y ++ GLC +G L +A ++ R
Sbjct: 330 NIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR 389
Query: 506 KGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
G CP + Y L + + K+++A +L +++
Sbjct: 390 NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM 422
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 85/175 (48%), Gaps = 6/175 (3%)
Query: 369 EPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMM 428
+P++ Y L+ +K R+V ++++M+ GI P T T + LC AA
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 429 MYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML---LDLWHEMQESGYPSDGEIYEYVIA 485
++ + + GCK + + +L+R G+ K G+ L+L + M+ G + IY +++
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVR---GYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 486 GLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIKI 540
C G+ +++ ++E+ +G P + ++ + L K+ A +F +++
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMEL 280
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 96/237 (40%), Gaps = 35/237 (14%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
D +YN+ + ++ VL DM K+G + LET + ++ Q+++ ++
Sbjct: 558 DSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLM 617
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKL 280
+++ G+ + + N + LC+ V A++L + M K + NV ++ +I + K+
Sbjct: 618 DEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKV 677
Query: 281 ----------------------------------GQVVEMERVLKEIVAEGFSPDSLTFS 306
GQ+++ +L+ ++ GF + +
Sbjct: 678 PDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYK 737
Query: 307 FLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
L+E L + ++ A + M ++G G D A VI +G+ E + M
Sbjct: 738 DLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKM 794
>sp|Q9LUJ4|PP248_ARATH Pentatricopeptide repeat-containing protein At3g22670,
mitochondrial OS=Arabidopsis thaliana GN=At3g22670 PE=2
SV=1
Length = 562
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 181/391 (46%), Gaps = 10/391 (2%)
Query: 149 FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAK--EGVNPDLETLSIVMD 206
FF WA +YN +V LG+ + FD M ++++M K E L+T+S VM
Sbjct: 152 FFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMR 211
Query: 207 SFIRAGQVYKAIQMLGRLE-DFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF 265
++G+ KA+ +E +G+K D ++N ++ L + + A +F + +
Sbjct: 212 RLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKP 271
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+ T+NI+I G+ K + + ++ + F+PD +T++ +E + G E+
Sbjct: 272 DARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEML 331
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
+ M+E GC P+ Y V+ + E + Y+ M C P+ Y+ LI L K+
Sbjct: 332 EEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKT 391
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKV---GCKLSL 442
+ DA E+FE+M ++G+ + + + A+ + K+ C ++
Sbjct: 392 GRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNV 451
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y LL+ K +L L H M ++ D Y +I GLC G++E A L EE
Sbjct: 452 ETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEE 511
Query: 503 SLRKGFCP----SRLVYSKLSNKLLASNKLE 529
++RKG P +++ +L K +A KL+
Sbjct: 512 AVRKGMVPRDSTCKMLVDELEKKNMAEAKLK 542
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 110/237 (46%), Gaps = 2/237 (0%)
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTM-KEKGCGPDTNAYNAVISNYISVGDFDECMKYYKG 362
T S ++ L ++G+ + A++ F M K G DT A N+++ + + + +
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK 264
Query: 363 MSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGP 422
+ +P+ T+ LI G K+RK DA + + M P T TSF+E C G
Sbjct: 265 LFD-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGD 323
Query: 423 PHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEY 482
M ++ R+ GC ++ Y +++ L + L ++ +M+E G D + Y
Sbjct: 324 FRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSS 383
Query: 483 VIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+I L G+ ++A + E+ +G LVY+ + + L ++ E A L ++++
Sbjct: 384 LIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRME 440
>sp|Q9FX35|PP117_ARATH Pentatricopeptide repeat-containing protein At1g73400,
mitochondrial OS=Arabidopsis thaliana GN=At1g73400 PE=2
SV=2
Length = 568
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/463 (23%), Positives = 204/463 (44%), Gaps = 12/463 (2%)
Query: 102 LRGVFLQKLKGKGVIEDALWNVNVDLSLDVVGKVVNRGNLSGEAMVLFFNWAIKHPNVAK 161
L + L +E AL +VDL+ VV K++ R + FF WA + +
Sbjct: 98 LHEAIMANLNAYDDMEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSH 157
Query: 162 DVKSYNVIVKALGRRKF----FDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVY-K 216
+ +YN ++ L K+ F + ++L M + N + + ++++ + + Y
Sbjct: 158 EPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRN--NKTVVLVDVLLEILRKYCERYLT 215
Query: 217 AIQMLGRLEDFGLKFDAE--SLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVI 274
+Q + + +K E + N++L LC+ V +L M+ +V + T+N++
Sbjct: 216 HVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLF 275
Query: 275 SGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG-- 332
GW ++ + ++L+E++ G P++ T+ I+ +AG +D+A ++FD M KG
Sbjct: 276 FGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSA 335
Query: 333 -CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADA 391
P + +I +EC + M S C P++ TY +I G+ + KV +A
Sbjct: 336 VSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEA 395
Query: 392 LEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRR 451
+ +EM ++G P T FL LC A+ +Y + + C S+ Y +L+
Sbjct: 396 YKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISM 455
Query: 452 LSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPS 511
+ W EM + D E Y +I GL + + + A ++EE + KG
Sbjct: 456 FFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLP 515
Query: 512 RLVYSKLSNKLLASNKLESAYNLFRKIKIARQNDYARRLWRSK 554
V+ +L L++ + + +K + ARR S+
Sbjct: 516 YRVFDSFLMRLSEVGNLKAIHKVSEHMKKFYNHSMARRFALSE 558
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 179/383 (46%), Gaps = 3/383 (0%)
Query: 158 NVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKA 217
V+ +V +YN++++ D + M +G P++ T + ++D + + ++
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 218 IQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM--KGKVLFNVMTYNIVIS 275
++L + GL+ + S NVV+ LC+ + S + M +G L V TYN +I
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV-TYNTLIK 318
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
G+ K G + + E++ G +P +T++ LI + +AG ++ A+E D M+ +G P
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP 378
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
+ Y ++ + G +E + + M+ P++ TY LI+G + K+ DA+ V
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 438
Query: 396 EEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGF 455
E+M ++G+ P + ++ L C A+ + ++ + G K Y L++
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498
Query: 456 GKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVY 515
+ DL+ EM G P D Y +I C G LE A+ + E + KG P + Y
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY 558
Query: 516 SKLSNKLLASNKLESAYNLFRKI 538
S L N L ++ A L K+
Sbjct: 559 SVLINGLNKQSRTREAKRLLLKL 581
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 182/375 (48%), Gaps = 2/375 (0%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ-VYKAIQMLGRL 224
++++VK+ R D +++ G P + + + V+D+ IR+ + + A + +
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 225 EDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQV 283
+ + + + N+++ C ++ A +LF+ M+ K L NV+TYN +I G+ KL ++
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 284 VEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAV 343
+ ++L+ + +G P+ ++++ +I GL R GR+ + V M +G D YN +
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 344 ISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGI 403
I Y G+F + + + M + P++ TYT LI + K+ + A+E ++M RG+
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 404 VPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLD 463
P+ T T+ ++ G + A + ++ G S+ Y L+ GK +
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 464 LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLL 523
+ +M+E G D Y V++G C ++ A+ V E + KG P + YS L
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 524 ASNKLESAYNLFRKI 538
+ + A +L+ ++
Sbjct: 497 EQRRTKEACDLYEEM 511
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 183/400 (45%), Gaps = 23/400 (5%)
Query: 144 EAMVL-FFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLS 202
+A++L F NWA +P+ ++ + + L + K + + D+A + ++ + +L
Sbjct: 62 QALILKFLNWA--NPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASL- 118
Query: 203 IVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESL-NVVLWCLCQRLHVGAASSLFNSMKG 261
V+K++Q E + L + S+ ++V+ + + A S+ + +
Sbjct: 119 -----------VFKSLQ-----ETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQA 162
Query: 262 K-VLFNVMTYNIVISGWSKLGQVVEM-ERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRID 319
+ V++YN V+ + + + E V KE++ SP+ T++ LI G AG ID
Sbjct: 163 HGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNID 222
Query: 320 DAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLI 379
A+ +FD M+ KGC P+ YN +I Y + D+ K + M+ EPN+ +Y +I
Sbjct: 223 VALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVI 282
Query: 380 SGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCK 439
+GL + ++ + V EM RG T + ++ C G H A++M+ + + G
Sbjct: 283 NGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT 342
Query: 440 LSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLV 499
S+ Y L+ + G ++ +M+ G + Y ++ G G + A V
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 500 MEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ E GF PS + Y+ L N + K+E A + +K
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Score = 115 bits (288), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 27/350 (7%)
Query: 163 VKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLG 222
V +Y ++ ++ + + L M G+ P+ T + ++D F + G + +A ++L
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404
Query: 223 RLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGWSKLG 281
+ D G + N ++ C + A ++ MK K L +V++Y+ V+SG+ +
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464
Query: 282 QVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYN 341
V E RV +E+V +G PD++T+S LI+G R +A ++++ M G PD Y
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524
Query: 342 AVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDR 401
A+I+ Y GD ++ ++ + M P++ TY+ LI+GL K + +A + ++
Sbjct: 525 ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYE 584
Query: 402 GIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML 461
VPS T + +E S +K ++ + GF GM+
Sbjct: 585 ESVPSDVTYHTLIE-----------------------NCSNIEFKSVVSLIKGFCMKGMM 621
Query: 462 LD---LWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGF 508
+ ++ M + DG Y +I G C G + A + +E ++ GF
Sbjct: 622 TEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 114/262 (43%), Gaps = 16/262 (6%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
+K ++ DV SY+ ++ R D V +M ++G+ PD T S ++ F +
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
+A + + GL D + ++ C + A L N M K VL +V+TY++
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIE---------------GLGRAGR 317
+I+G +K + E +R+L ++ E P +T+ LIE G G
Sbjct: 561 LINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGM 620
Query: 318 IDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTR 377
+ +A +VF++M K PD AYN +I + GD + YK M + T
Sbjct: 621 MTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIA 680
Query: 378 LISGLLKSRKVADALEVFEEML 399
L+ L K KV + V +L
Sbjct: 681 LVKALHKEGKVNELNSVIVHVL 702
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 128/303 (42%), Gaps = 9/303 (2%)
Query: 239 VLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGF 298
L C C LH+ L+ + ++L + + ++ L + + L+E +
Sbjct: 79 TLRCKCITLHILTKFKLYKT--AQILAEDVAAKTLDDEYASL-----VFKSLQETYDLCY 131
Query: 299 SPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYI-SVGDFDECM 357
S S+ F +++ R ID A+ + + G P +YNAV+ I S +
Sbjct: 132 STSSV-FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAE 190
Query: 358 KYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPL 417
+K M PN+ TY LI G + + AL +F++M +G +P+ T + ++
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250
Query: 418 CSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDG 477
C + + G + +L +Y +++ L G+ + + EM GY D
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 478 EIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRK 537
Y +I G C G A+++ E LR G PS + Y+ L + + + + A +
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 538 IKI 540
+++
Sbjct: 371 MRV 373
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 182/382 (47%), Gaps = 1/382 (0%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
+ D+ ++N+++ ++L M K G PD T+ +++ F R +V A+
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGW 277
++ ++ + G K D + N ++ LC+ V A F ++ K + NV+TY +++G
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 278 SKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDT 337
+ + R+L +++ + +P+ +T+S L++ + G++ +A E+F+ M PD
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 338 NAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEE 397
Y+++I+ DE + + M S C ++ +Y LI+G K+++V D +++F E
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 398 MLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGK 457
M RG+V +T T + ++ G A + + G + Y +LL L G+
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415
Query: 458 CGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSK 517
L ++ +MQ+ D Y VI G+C G++E A + KG P + Y+
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475
Query: 518 LSNKLLASNKLESAYNLFRKIK 539
+ + L L L+ K+K
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMK 497
Score = 132 bits (331), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 190/393 (48%), Gaps = 3/393 (0%)
Query: 144 EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSI 203
+A+ LF + P + +N ++ A+ + K +D + ++ M G+ DL T +I
Sbjct: 68 DAIDLFSDMVKSRP--FPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 204 VMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGK 262
V++ F QV A+ +LG++ G + D ++ ++ C+R V A SL + M +
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 263 VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAI 322
+++ YN +I K +V + KEI +G P+ +T++ L+ GL + R DA
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 323 EVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGL 382
+ M +K P+ Y+A++ ++ G E + ++ M + +P++ TY+ LI+GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 383 LKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSL 442
++ +A ++F+ M+ +G + + + + C M ++++ + G +
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 443 TAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEE 502
Y L++ G + + +M G D Y ++ GLC+ G+LE A+++ E+
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 503 SLRKGFCPSRLVYSKLSNKLLASNKLESAYNLF 535
++ + Y+ + + + K+E A++LF
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 152/294 (51%), Gaps = 6/294 (2%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
I+ + +V +Y +V L + +LSDM K+ + P++ T S ++D+F++ G+
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
V +A ++ + + D + + ++ LC + A+ +F+ M K L +V++YN
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
+I+G+ K +V + ++ +E+ G +++T++ LI+G +AG +D A E F M G
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD YN ++ G+ ++ + ++ M + ++ TYT +I G+ K+ KV +A
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVG-----CKLS 441
+F + +G+ P T T+ + LC+ G H +Y K ++ G C LS
Sbjct: 456 SLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 140/355 (39%), Gaps = 69/355 (19%)
Query: 184 NVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCL 243
++ SDM K P + + ++ + ++ + I + ++E G++ D + N+V+ C
Sbjct: 71 DLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 130
Query: 244 CQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSL 303
C V A S+ LG+++++ G+ PD +
Sbjct: 131 CCCFQVSLALSI------------------------LGKMLKL----------GYEPDRV 156
Query: 304 TFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGM 363
T L+ G R R+ DA+ + D M E G PD AYNA+
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI-------------------- 196
Query: 364 SSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPP 423
I L K+++V DA + F+E+ +GI P+ T T+ + LC+
Sbjct: 197 ---------------IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 424 HAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYV 483
A + K ++ Y LL GK +L+ EM D Y +
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 484 IAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
I GLC +++ A + + + KG + Y+ L N + ++E LFR++
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 102/225 (45%)
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
R +++DAI++F M + P +N ++S + + +D + K M ++
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
T+ +I+ +V+ AL + +ML G P TI S + C A+ + K
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
++G K + AY ++ L + D + E++ G + Y ++ GLCN +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+A ++ + ++K P+ + YS L + + + K+ A LF ++
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 76/167 (45%)
Query: 373 DTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKK 432
D RL L+ K+ DA+++F +M+ PS L + + + KK
Sbjct: 51 DLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKK 110
Query: 433 ARKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQ 492
+G + L + +++ + + L + +M + GY D ++ G C +
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 493 LENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
+ +AV ++++ + G+ P + Y+ + + L + ++ A++ F++I+
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE 217
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 183/366 (50%), Gaps = 1/366 (0%)
Query: 154 IKHPNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQ 213
++ + + D +YN+++ +L R D VL+ + + P + T +I++++ + G
Sbjct: 184 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGG 243
Query: 214 VYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNI 272
V +A++++ + GLK D + N ++ +C+ V A + +++ K +V++YNI
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 273 VISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKG 332
++ G+ E E+++ ++ +E P+ +T+S LI L R G+I++A+ + MKEKG
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 333 CGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADAL 392
PD +Y+ +I+ + G D +++ + M S C P++ Y +++ L K+ K AL
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423
Query: 393 EVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRL 452
E+F ++ + G P++ + + L S G A+ M + G Y ++ L
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483
Query: 453 SGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSR 512
G +L +M+ + Y V+ G C ++E+A+ V+E + G P+
Sbjct: 484 CREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNE 543
Query: 513 LVYSKL 518
Y+ L
Sbjct: 544 TTYTVL 549
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 164/345 (47%), Gaps = 1/345 (0%)
Query: 196 PDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSL 255
PD+ + +++ F + ++ A ++L R+ D + N+++ LC R + A +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 256 FNSM-KGKVLFNVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGR 314
N + V+TY I+I G V E +++ E+++ G PD T++ +I G+ +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 315 AGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDT 374
G +D A E+ ++ KGC PD +YN ++ ++ G ++E K M S C+PN+ T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 375 YTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKAR 434
Y+ LI+ L + K+ +A+ + + M ++G+ P + + C G A+ +
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 435 KVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLE 494
GC + Y +L L GK L+++ ++ E G + Y + + L + G
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 495 NAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKIK 539
A+ ++ E + G P + Y+ + + L ++ A+ L ++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR 500
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 138/308 (44%), Gaps = 36/308 (11%)
Query: 266 NVMTYNIVISGWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVF 325
+V+ +I G+ L + + RV+ EI+ + PD ++ LI G + RIDDA V
Sbjct: 123 DVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALINGFCKMNRIDDATRVL 181
Query: 326 DTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKS 385
D M+ K PDT YN +I + S G D +K + S NC+P + TYT LI +
Sbjct: 182 DRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLE 241
Query: 386 RKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAY 445
V +AL++ +EML RG+ P T + + +C G A M + GC+ + +Y
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISY 301
Query: 446 KLLLRRLSGFG---------------KC-----------------GML---LDLWHEMQE 470
+LLR L G KC G + ++L M+E
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 471 SGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLES 530
G D Y+ +IA C G+L+ A+ +E + G P + Y+ + L + K +
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 421
Query: 531 AYNLFRKI 538
A +F K+
Sbjct: 422 ALEIFGKL 429
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 168/378 (44%), Gaps = 1/378 (0%)
Query: 162 DVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQML 221
DV +YN ++ + D VL M + +PD T +I++ S G++ A+++L
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 222 GRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVL-FNVMTYNIVISGWSKL 280
+L + + +++ V A L + M + L ++ TYN +I G K
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 281 GQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAY 340
G V +++ + +G PD ++++ L+ L G+ ++ ++ M + C P+ Y
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 341 NAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLD 400
+ +I+ G +E M K M P+ +Y LI+ + ++ A+E E M+
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 401 RGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGM 460
G +P + L LC G A+ ++ K +VGC + ++Y + L G
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSN 520
L + EM +G D Y +I+ LC G ++ A ++ + F PS + Y+ +
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Query: 521 KLLASNKLESAYNLFRKI 538
++++E A N+ +
Sbjct: 517 GFCKAHRIEDAINVLESM 534
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 152/320 (47%), Gaps = 21/320 (6%)
Query: 115 VIEDALWNVNVDLSLDVVGKVVNRG-------------NLSGEAMV-----LFFNWAIKH 156
+IE + VD +L ++ ++++RG + E MV + N +K
Sbjct: 234 LIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK- 292
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
DV SYN++++AL + ++ +++ M E +P++ T SI++ + R G++ +
Sbjct: 293 -GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 351
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSM-KGKVLFNVMTYNIVIS 275
A+ +L +++ GL DA S + ++ C+ + A +M L +++ YN V++
Sbjct: 352 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 411
Query: 276 GWSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGP 335
K G+ + + ++ G SP+S +++ + L +G A+ + M G P
Sbjct: 412 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471
Query: 336 DTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVF 395
D YN++IS G DE + M S P++ TY ++ G K+ ++ DA+ V
Sbjct: 472 DEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVL 531
Query: 396 EEMLDRGIVPSTGTITSFLE 415
E M+ G P+ T T +E
Sbjct: 532 ESMVGNGCRPNETTYTVLIE 551
Score = 92.4 bits (228), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 120/246 (48%), Gaps = 9/246 (3%)
Query: 157 PNVAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYK 216
PNV +Y++++ L R + N+L M ++G+ PD + ++ +F R G++
Sbjct: 331 PNVV----TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 217 AIQMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF--NVMTYNIVI 274
AI+ L + G D + N VL LC+ A +F + G+V N +YN +
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL-GEVGCSPNSSSYNTMF 445
Query: 275 SG-WSKLGQVVEMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGC 333
S WS ++ + +L E+++ G PD +T++ +I L R G +D+A E+ M+
Sbjct: 446 SALWSSGDKIRALHMIL-EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF 504
Query: 334 GPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALE 393
P YN V+ + ++ + + M C PN TYT LI G+ + A+A+E
Sbjct: 505 HPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAME 564
Query: 394 VFEEML 399
+ +++
Sbjct: 565 LANDLV 570
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 1/225 (0%)
Query: 314 RAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDECMKYYKGMSSYNCEPNMD 373
R+G +++ + +TM KG PD +I + ++ + + ++ + + + +P++
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159
Query: 374 TYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLEPLCSYGPPHAAMMMYKKA 433
Y LI+G K ++ DA V + M + P T T + LCS G A+ + +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 434 RKVGCKLSLTAYKLLLRRLSGFGKCGMLLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQL 493
C+ ++ Y +L+ G L L EM G D Y +I G+C G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 494 ENAVLVMEESLRKGFCPSRLVYSKLSNKLLASNKLESAYNLFRKI 538
+ A ++ KG P + Y+ L LL K E L K+
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 188/418 (44%), Gaps = 21/418 (5%)
Query: 121 WNVNVDLSLDVV--GKVVNRGNLSG--EAMVLFFNWAIKHPNVAKDVKSYNVIVKALGRR 176
W + D DV ++NR G E V F + A K + ++ SY +++A +
Sbjct: 335 WIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNL-SYAPLIQAYCKS 393
Query: 177 KFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGLKFDAESL 236
K +D +L MA+ G PD+ T I++ + +G + A+ M +L D G+ DA
Sbjct: 394 KEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIY 453
Query: 237 NVVLWCLCQRLHVGAASSLFNSMKGK-VLFNVMTYNIVISGWSKLGQVVEMERVLKEIVA 295
N+++ LC+ A LF+ M + +L + Y +I G+ + G E +V V
Sbjct: 454 NMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVE 513
Query: 296 EGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYISVGDFDE 355
+G D + + +I+G R+G +D+A+ + M E+ PD Y+ +I Y+ D
Sbjct: 514 KGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMAT 573
Query: 356 CMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGTITSFLE 415
+K ++ M C+PN+ TYT LI+G A E F+EM R +VP+ T T+ +
Sbjct: 574 AIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIR 633
Query: 416 PLCSYGPP-HAAMMMYKKARKVGCKLSLTAYKLLLRRL--------------SGFGKCGM 460
L A+ ++ C + + LL+ S G+ +
Sbjct: 634 SLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSL 693
Query: 461 LLDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKL 518
+ +H M+ G+ Y + LC G ++ A + ++ ++KGF P + ++ +
Sbjct: 694 FSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAI 751
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 164/379 (43%), Gaps = 7/379 (1%)
Query: 166 YNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLE 225
YN I+ + + V ++ +G P LET +++ F + G + ++L ++
Sbjct: 243 YNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVK 302
Query: 226 DFGLKFDAESLNVVLWCLCQRLH-VGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVV 284
+ GL+ LN ++ + + V A S+ + +V TYNI+I+ K G+
Sbjct: 303 ERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKE 362
Query: 285 EMERVLKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVI 344
L E +G P++L+++ LI+ ++ D A ++ M E+GC PD Y +I
Sbjct: 363 VAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILI 422
Query: 345 SNYISVGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIV 404
+ G D+ + + P+ Y L+SGL K+ + A +F EMLDR I+
Sbjct: 423 HGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNIL 482
Query: 405 PSTGTITSFLEPLCSYGPPHAAMMMYKKARKVGCKLSLTAYKLLLRRLSGFGKCGML--- 461
P + ++ G A ++ + + G K+ + + +++ GF + GML
Sbjct: 483 PDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIK---GFCRSGMLDEA 539
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
L + M E D Y +I G + A+ + + P+ + Y+ L N
Sbjct: 540 LACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLING 599
Query: 522 LLASNKLESAYNLFRKIKI 540
+ A F+++++
Sbjct: 600 FCCQGDFKMAEETFKEMQL 618
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 162/379 (42%), Gaps = 51/379 (13%)
Query: 170 VKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAIQMLGRLEDFGL 229
+K L R + F+ + +VL ++ E V E LS V+ ++ +G + KA+++ + +
Sbjct: 106 LKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVE--- 162
Query: 230 KFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLFNVMTYNIVISGWSKLGQVVEMERV 289
L++S+ +V+ N ++S K ++ + +V
Sbjct: 163 -------------------------LYDSVP-----DVIACNSLLSLLVKSRRLGDARKV 192
Query: 290 LKEIVAEGFSPDSLTFSFLIEGLGRAGRIDDAIEVFDTMKEKGCGPDTNAYNAVISNYIS 349
E+ G S D+ + L++G+ G+++ ++ + KGC P+ YN +I Y
Sbjct: 193 YDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCK 252
Query: 350 VGDFDECMKYYKGMSSYNCEPNMDTYTRLISGLLKSRKVADALEVFEEMLDRGIVPSTGT 409
+GD + +K + P ++T+ +I+G K + + E+ +RG+ S
Sbjct: 253 LGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWF 312
Query: 410 ITSFLEPLCSYGPPHAAMMMYK--KARKVG------CKLSLTAYKLLLRRLSGFGKCGML 461
+ + ++ +G YK A +G CK + Y +L+ RL GK +
Sbjct: 313 LNNIIDAKYRHG--------YKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVA 364
Query: 462 LDLWHEMQESGYPSDGEIYEYVIAGLCNIGQLENAVLVMEESLRKGFCPSRLVYSKLSNK 521
+ E + G + Y +I C + + A ++ + +G P + Y L +
Sbjct: 365 VGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHG 424
Query: 522 LLASNKLESAYNLFRKIKI 540
L+ S ++ A N+ K+K+
Sbjct: 425 LVVSGHMDDAVNM--KVKL 441
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/299 (18%), Positives = 112/299 (37%), Gaps = 59/299 (19%)
Query: 159 VAKDVKSYNVIVKALGRRKFFDFMCNVLSDMAKEGVNPDLETLSIVMDSFIRAGQVYKAI 218
V DV +N ++K R D ++ M +E + PD T S ++D +++ + AI
Sbjct: 516 VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAI 575
Query: 219 QMLGRLEDFGLKFDAESLNVVLWCLCQRLHVGAASSLFNSMKGKVLF-NVMTYNIVISGW 277
++ +E K + + ++ C + A F M+ + L NV+TY +I
Sbjct: 576 KIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSL 635
Query: 278 SKLGQVVEMERVLKEIV-AEGFSPDSLTFSFLIEGLGRA--------------------- 315
+K +E E++ P+ +TF+ L++G +
Sbjct: 636 AKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFS 695
Query: 316 ----------------------------GRIDDAIEVFDTMKEKGCGPDTNAYNAVISNY 347
G + A D M +KG PD ++ A++ +
Sbjct: 696 EFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755
Query: 348 ISVGDFDECMKYYKGMSSYNC-EPNMDT---YTRLISGLLKSRKVADALEVFEEMLDRG 402
VG+ K ++ M N E ++ Y++++ L + +A + M+++
Sbjct: 756 CVVGN----SKQWRNMDFCNLGEKGLEVAVRYSQVLEQHLPQPVICEASTILHAMVEKA 810
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 197,562,731
Number of Sequences: 539616
Number of extensions: 8242501
Number of successful extensions: 30474
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 22832
Number of HSP's gapped (non-prelim): 2769
length of query: 558
length of database: 191,569,459
effective HSP length: 123
effective length of query: 435
effective length of database: 125,196,691
effective search space: 54460560585
effective search space used: 54460560585
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)