BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008636
(558 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255561466|ref|XP_002521743.1| AMP dependent ligase, putative [Ricinus communis]
gi|223538956|gb|EEF40553.1| AMP dependent ligase, putative [Ricinus communis]
Length = 556
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/560 (68%), Positives = 457/560 (81%), Gaps = 6/560 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD LKP PANS PLTPL F+ERA+T DCPSI+YN TYTWSQT+RRCLQLASSLSS G
Sbjct: 1 MDHLKPKPANSFPLTPLSFLERASTVYGDCPSIVYNTATYTWSQTHRRCLQLASSLSSGG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
G VVSV+APN P MYEL FAVPMSGA+ N INTRLDART+S++L+HS+SKLVFVD L
Sbjct: 61 FTRGDVVSVVAPNTPPMYELQFAVPMSGAVLNNINTRLDARTVSVLLRHSQSKLVFVDCL 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S L+LE VSLFP K P LVLITDD E + +SS DF TYE+M+ KGDP+F
Sbjct: 121 SRDLVLEAVSLFPSSVKRPTLVLITDDDE-APASSSTSSSSTVDFCCTYESMVEKGDPEF 179
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
WV+P+S+ DPM+LNYT GTTS+PKGVV C++ +II V+SLIDW VP+Q V LWTLP+F
Sbjct: 180 KWVQPQSEWDPMILNYTSGTTSSPKGVVHCHRGIYIITVESLIDWNVPRQPVYLWTLPLF 239
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGWSF WG A VG TN+C+RKFDA +++ LI++HGVTHMCGAP+VLN+L++SP+ + L
Sbjct: 240 HANGWSFPWGMAAVGGTNICIRKFDASSIYGLIKRHGVTHMCGAPVVLNMLTNSPDNEPL 299
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
RPV ILTAG+PPPA VL RTESLGF+VSHGYG TE AG+ VSCAWKPKWN +PA ERA
Sbjct: 300 KRPVHILTAGAPPPAAVLFRTESLGFVVSHGYGLTETAGLVVSCAWKPKWNTVPASERAR 359
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK- 419
LKARQGVR G TE+D++DP+TGLSVKRDG + GEIV+RGG +M+GYLKDP+ TSKC+K
Sbjct: 360 LKARQGVRIAGFTEIDVIDPKTGLSVKRDGLSLGEIVLRGGCVMMGYLKDPDGTSKCLKD 419
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
DG +YTGDVG+MHPDGYLEIKDRSKDVIISGGENISS E+ESVLYS+P+VNEAAVV RPD
Sbjct: 420 DGWFYTGDVGVMHPDGYLEIKDRSKDVIISGGENISSVEVESVLYSNPVVNEAAVVARPD 479
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
+W E PCAFVSL+ G +EKDII+YCR ++P YMVPKTVVF +ELPKT+TGK+
Sbjct: 480 EYWGETPCAFVSLRDGARE---KVSEKDIIEYCREKMPHYMVPKTVVFKEELPKTSTGKI 536
Query: 540 QKYVLGDIANSMSMSH-SRM 558
QK+VL DIA +M S SRM
Sbjct: 537 QKFVLRDIAKAMGASKVSRM 556
>gi|225466183|ref|XP_002263801.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Vitis vinifera]
Length = 549
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/560 (67%), Positives = 461/560 (82%), Gaps = 13/560 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD LKP PANS PLTPLGF++RAAT DCPS++YN TYTWSQT+RRCLQ+ASS+ SFG
Sbjct: 1 MDSLKPRPANSSPLTPLGFLDRAATVYGDCPSVLYNSITYTWSQTHRRCLQVASSIKSFG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I GHVVSV+APN+PAMYELHFAVPMSGA+ NTINTRLDART+S++L+HSESKLVFVD L
Sbjct: 61 IGRGHVVSVVAPNVPAMYELHFAVPMSGAVLNTINTRLDARTVSVLLRHSESKLVFVDCL 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S +L+LE +SLFPP+++ P LVLI D+ E++ SS+ DF+ TYE+++ +GDP+F
Sbjct: 121 SRALILEALSLFPPNTQWPLLVLIADE-EVAPSST-------VDFICTYEDLVERGDPEF 172
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
WVRP+S+ DP++LNYT GTTS+PKGVV C++ FI+ +DSL++W VPKQ V LWTLPMF
Sbjct: 173 KWVRPESEWDPIILNYTSGTTSSPKGVVHCHRGIFIVTIDSLVEWSVPKQPVYLWTLPMF 232
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGW+FTWG A +G TNVCLRKFDA ++ I K+G+THMC AP+VLN+LS+ P + L
Sbjct: 233 HGNGWTFTWGMAAIGGTNVCLRKFDARIIYDAIPKYGITHMCAAPVVLNMLSNYPNHQPL 292
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
PV+ILTAG+PPP VLLRTESLGF+VSHGYG TE AGV VSCAWKP+W++ PA ERA
Sbjct: 293 GDPVKILTAGAPPPYSVLLRTESLGFVVSHGYGMTETAGVVVSCAWKPQWDRFPASERAR 352
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM-K 419
+KARQGVRT+ +TEVD+VDP++G+SVKRDG + GEIV+RG +MLGYLKDPE TSKCM K
Sbjct: 353 VKARQGVRTVVMTEVDVVDPKSGVSVKRDGSSLGEIVLRGACIMLGYLKDPEGTSKCMSK 412
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
+G YTGDV +MHPDGY+EIKDRSKDVIISGGEN+SS E+ESVLY+HP VNEAAVV RPD
Sbjct: 413 EGWLYTGDVAVMHPDGYIEIKDRSKDVIISGGENLSSVEVESVLYTHPAVNEAAVVARPD 472
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
FW E PCAFVSLK + T K++++YCRAR+P YMVPKTVVF +ELPKT+TGK+
Sbjct: 473 DFWGETPCAFVSLKPESPD---KPTAKEMMEYCRARMPHYMVPKTVVFKEELPKTSTGKI 529
Query: 540 QKYVLGDIANSMSMS-HSRM 558
QK+ L DIA +M S SRM
Sbjct: 530 QKFKLRDIAKAMGCSPASRM 549
>gi|224134905|ref|XP_002321934.1| predicted protein [Populus trichocarpa]
gi|222868930|gb|EEF06061.1| predicted protein [Populus trichocarpa]
Length = 553
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/561 (68%), Positives = 454/561 (80%), Gaps = 11/561 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD L+P P NS LTP+GF++RAAT DCPSIIYND +YTWSQT+ RCLQLASSLSS G
Sbjct: 1 MDELRPRPPNSYALTPVGFLDRAATVYGDCPSIIYNDISYTWSQTHSRCLQLASSLSSIG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
IN GHVVSVIAPNIPAMYELHFAVPM+GAI NT+NTRLDARTIS++L H+ESKL+FVD +
Sbjct: 61 INKGHVVSVIAPNIPAMYELHFAVPMAGAILNTLNTRLDARTISLLLCHAESKLLFVDPM 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
SL+ E +SLFPP++K P LVLI DD+ +S SS P F DTYE+++ KGDP F
Sbjct: 121 YVSLVHEAISLFPPNTKHPPLVLIADDEVVSQQSS-----PTIHFYDTYESLVEKGDPAF 175
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+W+RPK+D DP+ LNYT GTT++PKGVV C++ FI+ +DSLIDW PKQ V LWTLPMF
Sbjct: 176 NWIRPKNDFDPIALNYTSGTTASPKGVVHCHRGLFIVTLDSLIDWSFPKQPVFLWTLPMF 235
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE-AKQ 299
H+NGWS+ WG A VG TN+C+RKFDAPT++ LI KH VTHMCGAP+VLN+LS+SP K
Sbjct: 236 HSNGWSYPWGMAAVGGTNICIRKFDAPTIYGLIEKHRVTHMCGAPVVLNMLSNSPTIIKP 295
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L PV I+TAG+PPPA +L RTESLGF+V HGYG TE G+ VSCAWK +W+ PA ERA
Sbjct: 296 LKNPVHIITAGAPPPATILSRTESLGFVVGHGYGLTETGGIVVSCAWKRQWSLFPATERA 355
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM- 418
LKARQGVRTIG+ EVD+VDP TG SVKRDG T GEIV+RGG +MLGYLKDP AT+KCM
Sbjct: 356 RLKARQGVRTIGMNEVDVVDPITGTSVKRDGSTLGEIVLRGGCIMLGYLKDPVATAKCMT 415
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
++G +YTGDVG+MHPDGYLEIKDRSKDVIISGGEN+SS E+ESVLY+ P +NEAAVV RP
Sbjct: 416 ENGWFYTGDVGVMHPDGYLEIKDRSKDVIISGGENLSSVEVESVLYTFPDINEAAVVARP 475
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
D FW E PCAFV+LK ++ TTEK+II+YCRAR+P YMVPKTVV +ELPKTATGK
Sbjct: 476 DEFWGETPCAFVTLK---EACCKSTTEKEIIEYCRARLPHYMVPKTVVVTEELPKTATGK 532
Query: 539 VQKYVLGDIANSMSMSH-SRM 558
+QK +L D+A M S SRM
Sbjct: 533 IQKALLRDMAKDMGSSRVSRM 553
>gi|224127758|ref|XP_002329170.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
gi|222870951|gb|EEF08082.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
Length = 550
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/560 (68%), Positives = 449/560 (80%), Gaps = 12/560 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ LKP PA+ PLTPL F+ER AT DCPS+IYN++TYTWSQT+RRCLQ+ASSLSS+G
Sbjct: 1 MEELKPTPASLSPLTPLAFLERTATVYGDCPSVIYNNSTYTWSQTHRRCLQVASSLSSYG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I PGHVVSV+APNIPAMYEL FAVPMSGAI N INTRLDART+SI+L+HSESKLVFVD L
Sbjct: 61 IKPGHVVSVVAPNIPAMYELQFAVPMSGAILNNINTRLDARTMSILLRHSESKLVFVDCL 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S ++L+ +SL PP++K P LVLI DD E + SS DF YE+M+ KGDP F
Sbjct: 121 SRDVILDAMSLLPPNTKRPPLVLIADDAEAAESSIT------DDFCCAYESMVEKGDPGF 174
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
WV+P S+ DPMVLNYT GTTS+PKGVV C+++ F I V SLIDW VPKQ V LWTLP+F
Sbjct: 175 KWVQPHSEWDPMVLNYTSGTTSSPKGVVHCHRSVFTITVGSLIDWGVPKQPVYLWTLPIF 234
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGWS+ WG A VG TN+CLRKFD PT+++LI++HGVTHMCGAP+VL +L++S + L
Sbjct: 235 HANGWSYPWGIAAVGGTNICLRKFDGPTIYSLIKRHGVTHMCGAPVVLTMLTNSTNKEPL 294
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
P++ILTAG+PPP+ VL RTESLGF+VSHGYG TE AG+ VSCAWKPKWN P ERA
Sbjct: 295 RNPIQILTAGAPPPSAVLFRTESLGFVVSHGYGLTETAGLVVSCAWKPKWNTFPPSERAR 354
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
LKARQGV+ +G TE+D+++PE+G SVKRDG GE+V++GG +MLGYLKDP TSKCMKD
Sbjct: 355 LKARQGVKIVGFTEIDVLEPESGKSVKRDGVALGEVVLKGGCIMLGYLKDPTGTSKCMKD 414
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +YTGDVG+MH DGYLEIKDRSKDVIISGGENISS EIESVLY+HP VNEAAVV RPD
Sbjct: 415 GWFYTGDVGVMHQDGYLEIKDRSKDVIISGGENISSVEIESVLYTHPAVNEAAVVARPDE 474
Query: 481 FWQEIPCAFVSLKTG-TDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
FW E PCAFV LK G T G EKD+I +CR ++P YMVPKTVVF DELPKT+TGK+
Sbjct: 475 FWGETPCAFVGLKDGLTQKPG----EKDMIDFCREKMPHYMVPKTVVFKDELPKTSTGKI 530
Query: 540 QKYVLGDIANSMSMSH-SRM 558
QK+VL IA SM S SRM
Sbjct: 531 QKFVLRGIAKSMGSSKGSRM 550
>gi|359476425|ref|XP_002263877.2| PREDICTED: medium-chain-fatty-acid--CoA ligase [Vitis vinifera]
Length = 588
Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/560 (67%), Positives = 453/560 (80%), Gaps = 13/560 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ LKP PANS PLT L F++RAAT DCPS++YN TTYTWSQT+ RCLQ+ASS+ S G
Sbjct: 40 MEELKPRPANSSPLTTLSFLDRAATVYGDCPSVVYNSTTYTWSQTHHRCLQVASSIKSLG 99
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G VVSV+APNIPAMYELHFAVPM+GA+ NTINTRLDA+T+S++L+HSESKL+FVD+
Sbjct: 100 IGRGQVVSVVAPNIPAMYELHFAVPMAGAVLNTINTRLDAKTVSVLLRHSESKLIFVDYQ 159
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S L+LE +SLFPP S+ P LVLITDD++ SPP + DF+ TYE+M+ +GDP+F
Sbjct: 160 SRPLILESLSLFPPSSQRPLLVLITDDED-----SPPSTV---DFLCTYEDMVGRGDPEF 211
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
W+RP+S+ +PM+LNYT GTTS+PKGVV C++ FI+ VDSLIDW VPKQ V LWTLPMF
Sbjct: 212 KWIRPESEWNPMILNYTSGTTSSPKGVVHCHRGIFIVTVDSLIDWCVPKQPVYLWTLPMF 271
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGWSF WG A VG TNVCLRKFDA ++ IR H VTHMCGAP+VLN+LS+ P + L
Sbjct: 272 HANGWSFPWGMAAVGGTNVCLRKFDASVIYEAIRVHRVTHMCGAPVVLNMLSNWPGTEPL 331
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
PV+ILTAG+PPPA +LLRTES GFIVSHGYG TE G+ VSC WK KWN+LPA ERA
Sbjct: 332 KNPVQILTAGAPPPAAILLRTESRGFIVSHGYGLTETGGLVVSCVWKQKWNRLPATERAR 391
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM-K 419
LK+RQGVRT+G+TEVD++DP +GLSVKRDG + GEIV+RGG +MLGYLKDP+ TSK +
Sbjct: 392 LKSRQGVRTVGMTEVDVLDPGSGLSVKRDGSSLGEIVLRGGCIMLGYLKDPKGTSKSLTD 451
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
DG ++TGDVG+MH DGYLEIKDRSKDVIISGGEN+SS E+ESVLY+HP VNEAAVV RPD
Sbjct: 452 DGWFFTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYTHPAVNEAAVVARPD 511
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
FW E PCAFVSLK TEK+I++YCRAR+P YMVPKTVVF +ELPKT+TGK+
Sbjct: 512 DFWGETPCAFVSLKPERTE---QPTEKEIMEYCRARMPHYMVPKTVVFEEELPKTSTGKI 568
Query: 540 QKYVLGDIANSMSMSH-SRM 558
QK+VL + A +M S SRM
Sbjct: 569 QKFVLRETAKAMGSSRVSRM 588
>gi|224127933|ref|XP_002329213.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
gi|222870994|gb|EEF08125.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
Length = 548
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/554 (67%), Positives = 446/554 (80%), Gaps = 8/554 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ LKP P +SCP TP+GF+ERAAT DCPSIIYN TTYTWSQTYRRCL++ASSLSS
Sbjct: 1 MEELKPMPPSSCPFTPIGFLERAATVYGDCPSIIYNSTTYTWSQTYRRCLKVASSLSSNV 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I PG VVSV+APN+PAMYEL FAVPMSGAI N INTRLDARTISI+L+HSESKLVFVD+L
Sbjct: 61 IKPGQVVSVVAPNVPAMYELQFAVPMSGAILNNINTRLDARTISILLRHSESKLVFVDYL 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S ++LE +SLFPP + P LVLITDD+E +PPP DF TYE+M+ KGDP+F
Sbjct: 121 SLDVILEALSLFPPETPCPALVLITDDEE----EAPPPPSLSVDFC-TYESMVEKGDPEF 175
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
WV+P+S+ DP+VLNYT GTTSAPKGVVQ ++A F I + SLIDW +PKQ+V LWTLP+F
Sbjct: 176 KWVQPQSEWDPVVLNYTSGTTSAPKGVVQSHRATFTITIGSLIDWSLPKQAVYLWTLPIF 235
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGWS+ WG A VG TN+CLR+ +APT+++LI++HGVTHMCGAP+VLN+L++SP A++L
Sbjct: 236 HANGWSYAWGMAAVGGTNICLRRVEAPTIYSLIKRHGVTHMCGAPVVLNMLTNSPNAERL 295
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
PV+ILT G+PPP+ VL R ESLGF+VSHGYG TE AG+ SCAWKPKWN PA ERA
Sbjct: 296 QNPVQILTGGAPPPSAVLFRAESLGFVVSHGYGLTETAGLVTSCAWKPKWNTFPASERAI 355
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
LK+RQGV +G TE+ +VDP TG SV+RDG + GE+V+RGGS+MLGY KDP TS CMKD
Sbjct: 356 LKSRQGVPFVGFTEMGVVDPNTGKSVERDGVSLGEVVLRGGSVMLGYFKDPLGTSMCMKD 415
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +YTGDVG++H DGYLE+KDRSKDVIISGGENISS EIESVLY+HP VNEAAVV RPD
Sbjct: 416 GWFYTGDVGVVHSDGYLEVKDRSKDVIISGGENISSVEIESVLYTHPAVNEAAVVARPDE 475
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
FW E PCAFVSLK G EKDII YCR ++ YMVPK VVF DELPKT+TGK+Q
Sbjct: 476 FWGETPCAFVSLKHGLPH---KPGEKDIIDYCREKMAHYMVPKIVVFKDELPKTSTGKIQ 532
Query: 541 KYVLGDIANSMSMS 554
KY+L + A + S
Sbjct: 533 KYLLREYAKVVDSS 546
>gi|224118022|ref|XP_002331538.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
gi|222873762|gb|EEF10893.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
Length = 554
Score = 782 bits (2020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/561 (67%), Positives = 454/561 (80%), Gaps = 10/561 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD L+P PANS LTP+GF++RAA DCPSIIYN+ +YTWSQT+RRCLQLASSLSS G
Sbjct: 1 MDELRPRPANSYALTPVGFLDRAAIVYGDCPSIIYNNISYTWSQTHRRCLQLASSLSSIG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+N GHVVS++APNIPAMYELHFAVPM+GAI NT+NTRLDARTIS++L H+ES+L+FVD +
Sbjct: 61 LNNGHVVSILAPNIPAMYELHFAVPMAGAILNTLNTRLDARTISLLLCHAESELLFVDLM 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S SL+ E +SL P +K P LVLI DD E+ P P I F DTYE +L KGDP F
Sbjct: 121 SVSLVNEAISLLPSSAKPPLLVLIADDDEVLPQQ-PSPTI---HFYDTYEGLLEKGDPAF 176
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+W RPK+D DP+VLNYT GTTS+PKGVV C++ FI+ +DSL+DW PKQ V LWTLPMF
Sbjct: 177 NWTRPKNDFDPIVLNYTSGTTSSPKGVVHCHRGLFIVTLDSLVDWSFPKQPVFLWTLPMF 236
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ- 299
H+NGWS+ WG A VG TN+CLRKFDAPT++ LI+KHGVTHMCGAP+VLN+LS+SP +
Sbjct: 237 HSNGWSYPWGMAAVGGTNICLRKFDAPTIYGLIKKHGVTHMCGAPVVLNMLSNSPITMEP 296
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L PV I+TAG+PPPA +L RTESLGF+V HGYG TE G+ VSCAWK +WN PA ERA
Sbjct: 297 LKNPVHIITAGAPPPATILSRTESLGFVVGHGYGLTETGGIVVSCAWKRQWNLFPATERA 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM- 418
LKARQGVRT+G+TEVD+VDP TG+SVKRDG T GEIV+RGG +MLGYLKDP AT+KCM
Sbjct: 357 RLKARQGVRTVGMTEVDVVDPVTGMSVKRDGLTLGEIVLRGGCIMLGYLKDPVATAKCMT 416
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
++G + TGDVG+MHPDGYLEIKDRSKDVIISGGEN+SS E+ESVLY+ P +NEAAVV RP
Sbjct: 417 ENGWFCTGDVGVMHPDGYLEIKDRSKDVIISGGENLSSVEVESVLYTFPDINEAAVVARP 476
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
D FW E PCAFVSLK ++ + TEK+II++CR ++P YMVPKTVV ++LPKT+TGK
Sbjct: 477 DEFWGETPCAFVSLK---EACCRIPTEKEIIEHCRGKLPHYMVPKTVVVKEKLPKTSTGK 533
Query: 539 VQKYVLGDIANSMSMSH-SRM 558
+QK VL D+A +M S SRM
Sbjct: 534 IQKAVLRDMAKAMGSSRASRM 554
>gi|147800064|emb|CAN64147.1| hypothetical protein VITISV_042774 [Vitis vinifera]
Length = 537
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/560 (66%), Positives = 453/560 (80%), Gaps = 25/560 (4%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD LKP PANS PLTPLGF++RAAT DCPS++YN TYTWSQT+RRCLQ+ASS+ SFG
Sbjct: 1 MDSLKPRPANSSPLTPLGFLDRAATVYGDCPSVLYNSITYTWSQTHRRCLQVASSIKSFG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I GHVVSV+APN+PAMYELHFAVPMSGA+ NTINTRLDART+S++L+HSESKLVFVD L
Sbjct: 61 IGRGHVVSVVAPNVPAMYELHFAVPMSGAVLNTINTRLDARTVSVLLRHSESKLVFVDCL 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S +L+LE +SLFPP+++ P LVLI D+ E++ SS+ +GDP+F
Sbjct: 121 SRALILEALSLFPPNTQWPLLVLIADE-EVAPSST-------------------RGDPEF 160
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
WVRP+S+ DP++LNYT GTTS+PKGVV C++ FI+ +DSL++W VPKQ V LWTLPMF
Sbjct: 161 KWVRPESEWDPIILNYTSGTTSSPKGVVHCHRGIFIVTIDSLVEWSVPKQPVYLWTLPMF 220
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGW+FTWG A VG TNVCLRKFDA ++ I K+G+THMC AP+VLN+LS+ P + L
Sbjct: 221 HGNGWTFTWGMAAVGGTNVCLRKFDARIIYDAIPKYGITHMCAAPVVLNMLSNYPNHQPL 280
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
PV+ILTAG+PPP VLLRTESLGF+VSHGYG TE AGV VSCAWKP+W++ PA ERA
Sbjct: 281 GYPVKILTAGAPPPYSVLLRTESLGFVVSHGYGMTETAGVVVSCAWKPQWDRFPASERAR 340
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM-K 419
+KARQGVRT+ +TEVD+VDP++G+SVKRDG + GEIV+RG +MLGYLKDPE TSKCM K
Sbjct: 341 VKARQGVRTVVMTEVDVVDPKSGVSVKRDGSSLGEIVLRGACIMLGYLKDPEGTSKCMSK 400
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
+G YTGDV +MHPDGY+EIKDRSKDVIISGGEN+SS E+ESVLY+HP VNEAAVV RPD
Sbjct: 401 EGWLYTGDVAVMHPDGYIEIKDRSKDVIISGGENLSSVEVESVLYTHPAVNEAAVVARPD 460
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
FW E PCAFVSLK G+ T K++++YCRAR+P YMVPKTVVF +ELPKT+TGK+
Sbjct: 461 DFWGETPCAFVSLKPGSPD---KPTAKEMMEYCRARMPHYMVPKTVVFKEELPKTSTGKI 517
Query: 540 QKYVLGDIANSMSMS-HSRM 558
QK+ L DIA +M S SRM
Sbjct: 518 QKFKLRDIAKAMGCSPASRM 537
>gi|449462358|ref|XP_004148908.1| PREDICTED: probable acyl-activating enzyme 5, peroxisomal-like
[Cucumis sativus]
Length = 557
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/552 (66%), Positives = 445/552 (80%), Gaps = 4/552 (0%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ LKP PANS PLTP+GFIERAA D SIIYN TTYTWS+T+RRCLQLASS+SSFG
Sbjct: 1 MEDLKPRPANSFPLTPIGFIERAAIIYGDSTSIIYNSTTYTWSETHRRCLQLASSISSFG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I GHVVSV APN PAMYELHFAVPM+GAI NTIN RLD RTISI+L+HSESKL+FVD
Sbjct: 61 IQRGHVVSVFAPNTPAMYELHFAVPMAGAILNTINLRLDTRTISILLRHSESKLIFVDQP 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S +L+ + ++LFPP K P LVLITDD SS P +FVD+YENM+ GD +F
Sbjct: 121 SCALIFDALALFPPDMKRPLLVLITDDTAEQDSSLPSVVSIRDNFVDSYENMVKSGDSKF 180
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
W+RP S+ DP+VLNYT GTTSAPKGVV C++ F +A+DS+++W VPKQSV LWTLPMF
Sbjct: 181 QWIRPLSEWDPIVLNYTSGTTSAPKGVVNCHRGVFTVALDSILEWGVPKQSVYLWTLPMF 240
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGWSF WG A VG TNVC+RKFD+ +F+LIR+H VTH+CGAP+VLN+L++SP+ L
Sbjct: 241 HGNGWSFPWGIAAVGGTNVCIRKFDSRLIFSLIRRHHVTHLCGAPVVLNMLTNSPDNLPL 300
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
DRPV+ILTAG+PPPA VLLRTESLGF+V+HGYG TE AG + C+WK +WN+LPA E+A
Sbjct: 301 DRPVKILTAGAPPPASVLLRTESLGFVVTHGYGLTESAGTIICCSWKSEWNQLPAIEQAR 360
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM-K 419
LKARQGVR + + VD++DPET SVKRDG + GEIV+RG SLMLGYLKD EATSK M +
Sbjct: 361 LKARQGVRMLAVEAVDVLDPETRKSVKRDGASIGEIVVRGPSLMLGYLKDTEATSKAMSE 420
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
DG ++TGDVG+MHPDGY+EIKDRSKDVIISGGEN+SS E+ESVLY +PMVNEAAVV RPD
Sbjct: 421 DGWFFTGDVGVMHPDGYIEIKDRSKDVIISGGENLSSVEVESVLYMNPMVNEAAVVARPD 480
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
FW E PCAF+SLK G TE++II+YC+ ++P++MVPKTV+F+ E+PKTATGK
Sbjct: 481 EFWGETPCAFISLKEGLSRK---PTEEEIIEYCKGKLPKFMVPKTVIFMTEMPKTATGKF 537
Query: 540 QKYVLGDIANSM 551
QK+VL A S+
Sbjct: 538 QKFVLRQKAKSL 549
>gi|255562407|ref|XP_002522210.1| AMP dependent ligase, putative [Ricinus communis]
gi|223538581|gb|EEF40185.1| AMP dependent ligase, putative [Ricinus communis]
Length = 562
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/568 (66%), Positives = 450/568 (79%), Gaps = 25/568 (4%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ LKP PAN+ PLTPL FIERAAT DDCPSIIY++TTYTWSQTY RC++LASSLSS G
Sbjct: 1 MEDLKPGPANTSPLTPLSFIERAATVYDDCPSIIYDNTTYTWSQTYHRCIKLASSLSSLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I+ GHVVSV+APN+PAMYELHFAVPM+GA+ NTIN RLDARTIS++L+H ES+L+FVD+L
Sbjct: 61 ISRGHVVSVLAPNVPAMYELHFAVPMAGAVLNTINIRLDARTISVLLQHGESELLFVDNL 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPAD-FVDTYENMLAKGDPQ 179
SL+L+ ++LFPP +K P LVL+ DD E++SS P D F+DTYE ++ KGDP
Sbjct: 121 CVSLVLDAIALFPPDAKPPALVLVADD-EVNSS-------PAIDQFIDTYEGLVIKGDPS 172
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F WVRP S+ DP+VLNYT GTTS+PKGVV C++ FI A++ LIDW VP Q V LWTLPM
Sbjct: 173 FKWVRPISEWDPIVLNYTSGTTSSPKGVVHCHRGSFISAINGLIDWFVPNQPVFLWTLPM 232
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSS------ 293
FH+NGW++ W AVVG N+CLRKFD PT++ LI+KH VTHMC AP+VLN+LS+
Sbjct: 233 FHSNGWNYPWSLAVVGGVNICLRKFDGPTIYRLIKKHNVTHMCAAPVVLNMLSNNYSPTD 292
Query: 294 -SPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNK 352
+ + L PV ILTAG+PPPA VL RTESLGFIVSHGYG TE G VSCAWK KWN+
Sbjct: 293 DNSQTPTLKNPVHILTAGAPPPASVLSRTESLGFIVSHGYGMTETGGTVVSCAWKSKWNQ 352
Query: 353 LPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPE 412
PA ERA LKARQGVRTIG+ EVD++DPETG SVKRDG + GEIV+RGG +MLGYLK+PE
Sbjct: 353 FPATERARLKARQGVRTIGMIEVDVLDPETGKSVKRDGLSLGEIVLRGGCIMLGYLKNPE 412
Query: 413 ATSKCMK-DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNE 471
TSK M DG ++TGDVG+MHPDGYLEIKDRSKDVIISGGEN+SS E+ESVLY+HP + E
Sbjct: 413 TTSKQMNDDGWFFTGDVGVMHPDGYLEIKDRSKDVIISGGENVSSVEVESVLYTHPDIKE 472
Query: 472 AAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMT----TEKDIIQYCRARIPRYMVPKTVVF 527
AAVV RPD FW E PCAFVSLK DSG + EK II+YCRAR+P +MVPK VV
Sbjct: 473 AAVVARPDEFWGETPCAFVSLK---DSGNGLIDQAMIEKKIIEYCRARMPHFMVPKMVVV 529
Query: 528 ID-ELPKTATGKVQKYVLGDIANSMSMS 554
I ELPKT+TGK++K+VL D+A +M S
Sbjct: 530 IKGELPKTSTGKIKKFVLRDMARAMGSS 557
>gi|356500976|ref|XP_003519306.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
Length = 555
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/560 (64%), Positives = 444/560 (79%), Gaps = 7/560 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M++LKP+ NS PLTPL F++RAAT D PS++YNDTT+TWSQT RRCLQLAS+L+S G
Sbjct: 1 MEQLKPSAVNSSPLTPLTFLDRAATVYGDVPSVVYNDTTFTWSQTRRRCLQLASALASLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I GHVVSV+APNIPAMYELHF+VP +GA+ N INTRLDART+S+IL+H+ S LVFVD
Sbjct: 61 IGRGHVVSVVAPNIPAMYELHFSVPFAGAVLNNINTRLDARTVSVILRHANSTLVFVDFA 120
Query: 121 SSSLLLEVVSLFP-PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
S L+LE +SLFP H+ P L+LITD+ + P + +F+ TYE +++KGDP
Sbjct: 121 SRDLVLEALSLFPRQHTHRPTLILITDNTVQEEKTKTSPTVD--NFLHTYEGLMSKGDPN 178
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F WV P SD DPM+LNYT GTTS+PKGVV C++ FI A+D+LIDW VPK + LWTLPM
Sbjct: 179 FKWVLPNSDWDPMILNYTSGTTSSPKGVVHCHRGAFISALDTLIDWAVPKNPIYLWTLPM 238
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW+ TWG A +G TN+C+RKFDA V++LIR H VTHMCGAP+VLN+L++S + +
Sbjct: 239 FHANGWNLTWGIAALGGTNICVRKFDAGVVYSLIRNHHVTHMCGAPVVLNMLTNS-DKRP 297
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L++PV+ +TAG+PPPA VLLR E GF+V HGYG TE G+ VSCAWK KWN+LPA ERA
Sbjct: 298 LEKPVQFITAGAPPPAAVLLRAEEFGFVVGHGYGLTETGGIVVSCAWKGKWNRLPATERA 357
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKARQGVRT+G+TEVD+V P TG SVKRDG + GEIV++GG +MLGYLKDP T++C K
Sbjct: 358 RLKARQGVRTVGVTEVDVVGP-TGESVKRDGVSVGEIVVKGGCVMLGYLKDPSGTARCFK 416
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
+GR+YTGDV +MH DGYLEIKDRSK+VIISGGEN+SS E+ESVLY HP VNEAAVV RPD
Sbjct: 417 NGRFYTGDVAVMHEDGYLEIKDRSKEVIISGGENLSSVELESVLYGHPAVNEAAVVARPD 476
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
+W E PCAFVSLK + TEKD+IQYC+ +P YMVPKTVVF DELPKT+TGK+
Sbjct: 477 EYWGETPCAFVSLKAAIKEKEKL-TEKDMIQYCKDNMPHYMVPKTVVFKDELPKTSTGKI 535
Query: 540 QKYVLGDIANSM-SMSHSRM 558
QK+VL IAN+M S+ HSR+
Sbjct: 536 QKFVLKQIANNMGSLKHSRI 555
>gi|356500978|ref|XP_003519307.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
Length = 549
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/560 (66%), Positives = 444/560 (79%), Gaps = 13/560 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M++LKP+ ANS PLTPLGF++RAAT D PS++YN+TT+TWSQT RRCLQLAS+LSS G
Sbjct: 1 MEQLKPSAANSSPLTPLGFLDRAATVHGDVPSVVYNNTTFTWSQTRRRCLQLASALSSLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G VVSV+APNIPAMYELHFAVP +GAI N INTRLDART+S+IL+H+ S LVFVD
Sbjct: 61 IRRGSVVSVVAPNIPAMYELHFAVPFAGAILNNINTRLDARTVSVILRHANSTLVFVDCA 120
Query: 121 SSSLLLEVVSLFPPH-SKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
S L+LE +SLFP + S+ P L+LITD+ +S P DF+DTYE +++KGDP
Sbjct: 121 SRDLVLEALSLFPENQSQRPTLILITDETIEKAS-------PTVDFLDTYEGLVSKGDPG 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F WV P S+ DP+VLNYT GTTS+PKGVV C++ FI+AVDSLIDW VPK V LWTLPM
Sbjct: 174 FKWVLPNSEWDPIVLNYTSGTTSSPKGVVHCHRGTFIVAVDSLIDWAVPKNPVYLWTLPM 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGWSF +G A VG TN+C+RKFDA V++LI++H VTHMCGAP+VLN+L+++
Sbjct: 234 FHANGWSFPYGIAAVGGTNICVRKFDAEIVYSLIKRHHVTHMCGAPVVLNMLTNA--NSP 291
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L++PV+ILTAG+PPPA VL RTE+LGF+VSHGYG TE G+ VSCAWK +WNKLPA ERA
Sbjct: 292 LEKPVQILTAGAPPPAAVLFRTEALGFVVSHGYGLTETGGLVVSCAWKGEWNKLPATERA 351
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKARQGVRT+ + EVD+V P TG SVKRDG + GE+VM+GG +MLGYLKDP T+ C K
Sbjct: 352 RLKARQGVRTVAMAEVDVVGP-TGESVKRDGVSIGEVVMKGGCVMLGYLKDPSGTASCFK 410
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
+G +YTGDVG+MH DGYLEIKDRSKDVIISGGEN+SS E+ES+LY HP VNEAAVV RP
Sbjct: 411 NGWFYTGDVGVMHEDGYLEIKDRSKDVIISGGENLSSVEVESILYGHPAVNEAAVVARPH 470
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
+W E PCAFVSLK G TEKDII+YCR +P YMVPKTVVF DELPKT+TGK+
Sbjct: 471 EYWGETPCAFVSLKKGIKE-KEKPTEKDIIEYCRDNMPHYMVPKTVVFKDELPKTSTGKI 529
Query: 540 QKYVLGDIANSM-SMSHSRM 558
QK+VL IA M S + SRM
Sbjct: 530 QKFVLRQIAKEMGSFTQSRM 549
>gi|224126537|ref|XP_002319862.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
gi|222858238|gb|EEE95785.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
Length = 540
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/551 (66%), Positives = 434/551 (78%), Gaps = 15/551 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD LKP+P NS PLTP+ F+ERAA A DCPSIIYNDTTYTWSQT RRCL++ASSLSS+G
Sbjct: 1 MDELKPSPVNSTPLTPIAFLERAAIAYADCPSIIYNDTTYTWSQTNRRCLEVASSLSSYG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I GHVVSV+APN+PA YEL FAVPM+GAI + INTRLDAR + I+L+HSESKLVFVD+L
Sbjct: 61 IETGHVVSVLAPNVPATYELQFAVPMAGAILHNINTRLDARNVCILLRHSESKLVFVDYL 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S L+LE VSLFP +KTP TD SS + F +YE+M+ KG+P F
Sbjct: 121 SRELILEAVSLFPTDNKTP----YTDQSSSSSLT--------GHFSCSYEDMVEKGNPGF 168
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
WV+P+S+ DP+VLNYT GTTS+PKGVVQ ++ FI++ +LIDW VPKQ V LW LP+F
Sbjct: 169 KWVQPQSEWDPVVLNYTSGTTSSPKGVVQSHRGIFIVSAAALIDWGVPKQPVYLWALPIF 228
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGWS WG A VG TN+CLRK +A T+++LI +HGVTHM GAP+VLN+L+ SP+ + L
Sbjct: 229 HTNGWSHVWGMAAVGGTNICLRKVEASTIYSLIDRHGVTHMSGAPVVLNILTKSPDVEPL 288
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
PV I+TAG+PPPA V+LRTESLGF+VSHGYG TE AG+ VSCAWKPKWN PA ERA
Sbjct: 289 KNPVHIITAGAPPPAAVILRTESLGFVVSHGYGLTETAGLVVSCAWKPKWNTFPASERAR 348
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
LKARQGV G TE+D+VDP TG S++RDG + GE+V+RGG LMLGYLKDP TSKCMKD
Sbjct: 349 LKARQGVTMAGFTEMDVVDPRTGESMRRDGVSVGEVVLRGGCLMLGYLKDPLGTSKCMKD 408
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +YTGDVG+MH DGYLEIKDRSKDVIISGGENISS E+ESVLY+HP V+EAAVVGRPD
Sbjct: 409 GWFYTGDVGIMHQDGYLEIKDRSKDVIISGGENISSVEVESVLYTHPAVHEAAVVGRPDE 468
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
FW E PCAFV LK G + EKDII +CR +P +MVPKTVVF DELP+T+TGK+Q
Sbjct: 469 FWGETPCAFVDLKDGLNH---KPCEKDIIDFCRNNMPHFMVPKTVVFKDELPRTSTGKIQ 525
Query: 541 KYVLGDIANSM 551
K+VL +IA M
Sbjct: 526 KFVLKEIAKGM 536
>gi|449527394|ref|XP_004170696.1| PREDICTED: probable acyl-activating enzyme 5, peroxisomal-like
[Cucumis sativus]
Length = 557
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/552 (66%), Positives = 438/552 (79%), Gaps = 4/552 (0%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ LKP PANS PLTP+GFIERAA D SIIYN TTYTWS+T+RRCLQLASS+SSFG
Sbjct: 1 MEDLKPRPANSFPLTPIGFIERAAIIYGDSTSIIYNSTTYTWSETHRRCLQLASSISSFG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I GHVVSV APN PAMYELHFAVPM+GAI NTIN RLD RTISI+L+HSESKL+FVD
Sbjct: 61 IQRGHVVSVFAPNTPAMYELHFAVPMAGAILNTINLRLDTRTISILLRHSESKLIFVDQP 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S +L+ + ++LFPP K P LVLITDD SS P +FVD+YENM+ GD +F
Sbjct: 121 SCALIFDALALFPPDMKRPLLVLITDDTAEQDSSLPSVVSIRDNFVDSYENMVKSGDSKF 180
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
W+RP S+ DP+VLNYT GTTSA KGVV C++ F ++W VPKQSV LWTLPMF
Sbjct: 181 QWIRPLSEWDPIVLNYTSGTTSATKGVVNCHEGSFHGGTRFNLEWGVPKQSVYLWTLPMF 240
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGWSF WG A VG TNVC+RKFD+ +F+LIR+H VTH+CGAP+VLN+L++SP+ L
Sbjct: 241 HGNGWSFPWGIAAVGGTNVCIRKFDSRLIFSLIRRHHVTHLCGAPVVLNMLTNSPDNLPL 300
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
DRPV+ILTAG+PPPA VLLRTESLGF+V+HGYG TE AG + C+WK +WN+LPA E+A
Sbjct: 301 DRPVKILTAGAPPPASVLLRTESLGFVVTHGYGLTESAGTIICCSWKSEWNQLPAIEQAR 360
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM-K 419
LKARQGVR + + VD++DPET SVKRDG + GEIV+RG SLMLGYLKD EATSK M +
Sbjct: 361 LKARQGVRMLAVEAVDVLDPETRKSVKRDGASIGEIVVRGPSLMLGYLKDTEATSKAMSE 420
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
DG ++TGDVG+MHPDGY+EIKDRSKDVIISGGEN+SS E+ESVLY +PMVNEAAVV RPD
Sbjct: 421 DGWFFTGDVGVMHPDGYIEIKDRSKDVIISGGENLSSVEVESVLYMNPMVNEAAVVARPD 480
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
FW E PCAF+SLK G TE++II+YC+ ++P++MVPKTV+F+ E+PKTATGK
Sbjct: 481 EFWGETPCAFISLKEGLSR---KPTEEEIIEYCKGKLPKFMVPKTVIFMTEMPKTATGKF 537
Query: 540 QKYVLGDIANSM 551
QK+VL A S+
Sbjct: 538 QKFVLRQKAKSL 549
>gi|449462360|ref|XP_004148909.1| PREDICTED: probable acyl-activating enzyme 5, peroxisomal-like
[Cucumis sativus]
Length = 576
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/555 (63%), Positives = 443/555 (79%), Gaps = 6/555 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ LKP PANS PLTP+GF+ERA+ D PSIIY+ TT+TWSQTYRRCL+LASSLSS G
Sbjct: 22 MEHLKPTPANSSPLTPIGFLERASLIYADSPSIIYSSTTFTWSQTYRRCLRLASSLSSIG 81
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I+ GHVVSVIAPN P MYEL FAVPM+GAI + IN RLDARTIS+ L+HSESKL+FVD
Sbjct: 82 IHKGHVVSVIAPNTPPMYELQFAVPMAGAILSCINLRLDARTISVQLRHSESKLLFVDQA 141
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
SS L+ + ++LFPP +K P LVLI+DD + S+S D VD YE+M+ KGDP+F
Sbjct: 142 SSGLISDALALFPPEAKRPLLVLISDDAAVEDSASSVAI--GGDVVDLYEDMVQKGDPEF 199
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
W+RP S+ DP+V+NYT GTTS+PKGVV ++ F + +DSLI+W VPK SV LWTLPMF
Sbjct: 200 RWIRPVSEWDPIVMNYTSGTTSSPKGVVHSHRGIFTVTLDSLIEWGVPKHSVYLWTLPMF 259
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGWSF + A VG TN+C+RKFDA +F+LI +H VTHMCGAP+VLN+L++SP + L
Sbjct: 260 HANGWSFPFAIAAVGGTNICIRKFDAALIFSLINRHHVTHMCGAPVVLNMLTNSPNNRPL 319
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
+RPV+ILTAG+PPPA VLLRTESLGF VSHGYG TE G+ + C+WK +WN+LPA ERA
Sbjct: 320 ERPVKILTAGAPPPAAVLLRTESLGFDVSHGYGLTETGGLVIFCSWKLEWNQLPATERAR 379
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM-K 419
LKARQGVRT+ + E D++D TG V+RDG + GEIV+RGGS+MLGY KDPEAT K M +
Sbjct: 380 LKARQGVRTLAMAEADVLDSGTGKRVQRDGVSIGEIVIRGGSMMLGYFKDPEATKKAMTE 439
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
+G ++TGDVG+MHPDGYLEIKDRSKDVIISGGEN+SS E+ESVLY++P VNEAAVV RPD
Sbjct: 440 EGWFFTGDVGVMHPDGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVARPD 499
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
FW E PCAFVSL+ G + TE++II+YC+ ++ +MVPKTVVF+++LPKT+TGK+
Sbjct: 500 EFWGETPCAFVSLREGLTR---VPTEEEIIEYCKGKLAGFMVPKTVVFMEQLPKTSTGKI 556
Query: 540 QKYVLGDIANSMSMS 554
QK++L ++A SM S
Sbjct: 557 QKFLLREMAKSMGCS 571
>gi|357491647|ref|XP_003616111.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
gi|355517446|gb|AES99069.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
Length = 562
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/556 (65%), Positives = 430/556 (77%), Gaps = 14/556 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD+LKP AN+ PLTPL F+ER +T + PSIIYNDT +TWSQT++RCLQLAS+++S G
Sbjct: 1 MDQLKPTQANNSPLTPLTFLERTSTIYPNTPSIIYNDTVFTWSQTHKRCLQLASAITSLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G+VVSVIAPNIPAMYELHFAVP +GAI N INTRLDAR IS IL H ESKLVFVD
Sbjct: 61 IRRGNVVSVIAPNIPAMYELHFAVPFTGAILNNINTRLDARIISNILLHCESKLVFVDIA 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDD-----KEISSSSSPPPRIPPADFVDTYENMLAK 175
+ L+L+ +SLFP P L+LI D + +SSSS+ DF+ TYE+++A
Sbjct: 121 ARDLVLQALSLFPSKQHKPLLILIKDQTFETYENVSSSST-------VDFISTYEDLMAS 173
Query: 176 GDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLW 235
GDP F+WV P S+ DPM+LNYT GTTS+PKGVV ++ FI+ VD+LI+W VPKQ + LW
Sbjct: 174 GDPNFNWVYPNSEWDPMLLNYTSGTTSSPKGVVHSHRGAFIVTVDTLIEWTVPKQPIYLW 233
Query: 236 TLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP 295
TLPMFH NGWSF WG A VG TN+C+RKFDA VF+LIRKH VTHMCGAP+VLN+L++SP
Sbjct: 234 TLPMFHANGWSFPWGIAAVGGTNICVRKFDAEIVFSLIRKHHVTHMCGAPVVLNMLTNSP 293
Query: 296 EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
+ K L + V ILTAG+PPPA VL RTE+LGF VSHGYG TE G+ V C WK KWN LPA
Sbjct: 294 DNKPLQKTVHILTAGAPPPAAVLHRTEALGFTVSHGYGLTETGGLVVCCTWKKKWNLLPA 353
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
ERA LK+RQGVRT+G+T+VD+V P +G SVKRDG T GE+VMRGG +MLGYLKD E T
Sbjct: 354 TERARLKSRQGVRTLGMTKVDVVGP-SGESVKRDGATLGEVVMRGGCVMLGYLKDSEGTK 412
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
C K G +YTGDVG+MH DGYLEIKDRSKDVIISGGEN+SS E+ESVLY HP VNEAAVV
Sbjct: 413 NCFKKGWFYTGDVGVMHEDGYLEIKDRSKDVIISGGENLSSVEVESVLYGHPAVNEAAVV 472
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
R D FW E PCAFVSLK G + TEK+I++YCR +P YMVPKTVVF DELPKT+
Sbjct: 473 AREDEFWGETPCAFVSLKEGLKERD-IPTEKEIVEYCRKNLPHYMVPKTVVFKDELPKTS 531
Query: 536 TGKVQKYVLGDIANSM 551
TGK+QK+VL IA M
Sbjct: 532 TGKIQKFVLRQIAKDM 547
>gi|297811775|ref|XP_002873771.1| hypothetical protein ARALYDRAFT_488489 [Arabidopsis lyrata subsp.
lyrata]
gi|297319608|gb|EFH50030.1| hypothetical protein ARALYDRAFT_488489 [Arabidopsis lyrata subsp.
lyrata]
Length = 552
Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/560 (62%), Positives = 443/560 (79%), Gaps = 10/560 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSF 59
M+ +KP ANS PLTP+GF+ERAAT DC SI+Y ++T YTW +T RCL++ASSLSS
Sbjct: 1 MEDMKPCAANSPPLTPIGFLERAATVYGDCTSIVYGSNTVYTWRETNLRCLRVASSLSSI 60
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
GI VVSV++PN PAMYEL FAVPMSGAI N INTRLDART+S++L+H SKL+FVD
Sbjct: 61 GIGRSDVVSVLSPNTPAMYELQFAVPMSGAILNNINTRLDARTVSVLLRHCGSKLLFVDV 120
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
S L ++ +S+ + P LV I D +E + R F TY++++ +GDP
Sbjct: 121 FSVDLAVKAISMM--TTDPPILVFIADKEEEGGDADVADR---TKFNYTYDDLIQRGDPG 175
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W+RP+S+ DP+VLNYT GTTSAPKGVV C++ F++++DSLIDW VPK V LWTLP+
Sbjct: 176 FKWIRPESEWDPVVLNYTSGTTSAPKGVVHCHRGIFVMSIDSLIDWTVPKNPVYLWTLPI 235
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGWS+ WG A VG TNVCLRKFDAP ++ LIR+HGVTHMCGAP+VLN+LS++ E++
Sbjct: 236 FHANGWSYPWGIAAVGGTNVCLRKFDAPLIYRLIREHGVTHMCGAPVVLNMLSATQESQP 295
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L+RPV ILTAG+PPPA VLLR ES+GF++SHGYG TE AG+NVSCAWKP+WN+LPA +RA
Sbjct: 296 LNRPVNILTAGAPPPAAVLLRAESIGFVISHGYGLTETAGLNVSCAWKPQWNRLPASDRA 355
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKARQGVRT+G TE+D+VD E+GLSV+R+G+T GEIVMRG S+MLGYLKDP T K +K
Sbjct: 356 RLKARQGVRTVGFTEIDVVDTESGLSVERNGETVGEIVMRGSSIMLGYLKDPIGTEKALK 415
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
+G +YTGDVG++H DGYLEIKDRSKD+II+GGEN+SS E+E+VLY++P V+E AVV RPD
Sbjct: 416 NGWFYTGDVGVIHSDGYLEIKDRSKDIIITGGENVSSVEVEAVLYTNPAVSEVAVVARPD 475
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
FW E PCAFVSLK+G TE+++I+YCR ++PRYMVPKTV F+DELPKT+TGKV
Sbjct: 476 AFWGETPCAFVSLKSGLSR---RPTEEELIEYCRKKMPRYMVPKTVSFVDELPKTSTGKV 532
Query: 540 QKYVLGDIANSMSMSH-SRM 558
K+VL +IA M M+ SRM
Sbjct: 533 MKFVLREIAKKMGMTRLSRM 552
>gi|15237335|ref|NP_197141.1| acyl activating enzyme 5 [Arabidopsis thaliana]
gi|75309026|sp|Q9FFE6.1|AAE5_ARATH RecName: Full=Probable acyl-activating enzyme 5, peroxisomal;
AltName: Full=AMP-binding protein 5; Short=AtAMPBP5
gi|20799719|gb|AAM28622.1|AF503764_1 adenosine monophosphate binding protein 5 AMPBP5 [Arabidopsis
thaliana]
gi|9759119|dbj|BAB09604.1| AMP-binding protein [Arabidopsis thaliana]
gi|332004901|gb|AED92284.1| acyl activating enzyme 5 [Arabidopsis thaliana]
Length = 552
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/560 (62%), Positives = 439/560 (78%), Gaps = 10/560 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSF 59
M+++KP ANS PLTP+GF+ERAAT DC SI+Y ++T YTW +T RCL++ASSLSS
Sbjct: 1 MEQMKPCAANSPPLTPIGFLERAATVYGDCTSIVYGSNTVYTWRETNLRCLRVASSLSSI 60
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
GI VVSV++PN PAMYEL FAVPMSGAI N INTRLDART+S++L+H SKL+FVD
Sbjct: 61 GIGRSDVVSVLSPNTPAMYELQFAVPMSGAILNNINTRLDARTVSVLLRHCGSKLLFVDV 120
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
S L +E +S+ + P LV I D +E + R F TY++++ +GD
Sbjct: 121 FSVDLAVEAISMMT--TDPPILVFIADKEEEGGDADVADR---TKFSYTYDDLIHRGDLD 175
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W+RP+S+ DP+VLNYT GTTSAPKGVV C++ F++++DSLIDW VPK V LWTLP+
Sbjct: 176 FKWIRPESEWDPVVLNYTSGTTSAPKGVVHCHRGIFVMSIDSLIDWTVPKNPVYLWTLPI 235
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGWS+ WG A VG TNVCLRKFDAP ++ LIR HGVTHMCGAP+VLN+LS++ E +
Sbjct: 236 FHANGWSYPWGIAAVGGTNVCLRKFDAPLIYRLIRDHGVTHMCGAPVVLNMLSATNEFQP 295
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L+RPV ILTAG+PPPA VLLR ES+GF++SHGYG TE AG+NVSCAWKP+WN+LPA +RA
Sbjct: 296 LNRPVNILTAGAPPPAAVLLRAESIGFVISHGYGLTETAGLNVSCAWKPQWNRLPASDRA 355
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKARQGVRT+G TE+D+VDPE+G SV+R+G+T GEIVMRG S+MLGYLKDP T K +K
Sbjct: 356 RLKARQGVRTVGFTEIDVVDPESGRSVERNGETVGEIVMRGSSIMLGYLKDPVGTEKALK 415
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
+G +YTGDVG++H DGYLEIKDRSKD+II+GGEN+SS E+E+VLY++P VNE AVV RPD
Sbjct: 416 NGWFYTGDVGVIHSDGYLEIKDRSKDIIITGGENVSSVEVETVLYTNPAVNEVAVVARPD 475
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
FW E PCAFVSLK+G TE ++I+YCR ++P+YMVPKTV F+DELPKT+TGKV
Sbjct: 476 VFWGETPCAFVSLKSGLTQ---RPTEVEMIEYCRKKMPKYMVPKTVSFVDELPKTSTGKV 532
Query: 540 QKYVLGDIANSMSMSH-SRM 558
K+VL +IA M + SRM
Sbjct: 533 MKFVLREIAKKMGTTRLSRM 552
>gi|15237328|ref|NP_197138.1| AMP-binding protein 6 [Arabidopsis thaliana]
gi|75309027|sp|Q9FFE9.1|AAE6_ARATH RecName: Full=Probable acyl-activating enzyme 6; AltName:
Full=AMP-binding protein 6; Short=AtAMPBP6
gi|20799721|gb|AAM28623.1|AF503765_1 adenosine monophosphate binding protein 6 AMPBP6 [Arabidopsis
thaliana]
gi|9759116|dbj|BAB09601.1| AMP-binding protein [Arabidopsis thaliana]
gi|332004898|gb|AED92281.1| AMP-binding protein 6 [Arabidopsis thaliana]
Length = 550
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/552 (63%), Positives = 436/552 (78%), Gaps = 9/552 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSF 59
M+ +KP ANS PLTP+GF+ERAAT DC SI+Y ++T YTW +T RCL++ASSLSS
Sbjct: 1 MEEMKPCAANSPPLTPIGFLERAATVYGDCTSIVYGSNTVYTWRETNLRCLRVASSLSSI 60
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
GI VVSV++PN PAMYEL FAVPMSGAI N INTRLDART+S++L+H ESKL+FVD
Sbjct: 61 GIGRSDVVSVLSPNTPAMYELQFAVPMSGAILNNINTRLDARTVSVLLRHCESKLLFVDV 120
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
S L +E VS+ + P ++++ DKE + + + F TY++++ +GDP
Sbjct: 121 FSVDLAVEAVSMM---TTDPPILVVIADKEEEGGVADVADL--SKFSYTYDDLIERGDPG 175
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W+RP+S+ DP+VLNYT GTTSAPKGVV C++ F+++VDSLIDW VPK V LWTLP+
Sbjct: 176 FKWIRPESEWDPVVLNYTSGTTSAPKGVVHCHRGIFVMSVDSLIDWAVPKNPVYLWTLPI 235
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH+NGW+ WG A VG TNVCLRKFDAP ++ LIR HGVTHMCGAP+VLN+LS++ E++
Sbjct: 236 FHSNGWTNPWGIAAVGGTNVCLRKFDAPLIYRLIRDHGVTHMCGAPVVLNMLSATQESQP 295
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L+ PV ILTAGSPPPA VLLR ES+GF++SHGYG TE AGV VSCAWKPKWN LPA +RA
Sbjct: 296 LNHPVNILTAGSPPPATVLLRAESIGFVISHGYGLTETAGVIVSCAWKPKWNHLPASDRA 355
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKARQGVRT+G TE+D+VDPE+GLSV+R+G+T GEIVMRG S+MLGYLKDP T K +K
Sbjct: 356 RLKARQGVRTVGFTEIDVVDPESGLSVERNGETVGEIVMRGSSVMLGYLKDPVGTEKALK 415
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
+G +YTGDVG++H DGYLEIKDRSKD+II+GGEN+SS E+E+VLY+ P VNE AVV RPD
Sbjct: 416 NGWFYTGDVGVIHSDGYLEIKDRSKDIIITGGENVSSVEVETVLYTIPAVNEVAVVARPD 475
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
FW E PCAFVSLK G TE+++++YCR ++P+YMVPKTV F+DELPK++TGKV
Sbjct: 476 EFWGETPCAFVSLKNGFSG---KPTEEELMEYCRKKMPKYMVPKTVSFMDELPKSSTGKV 532
Query: 540 QKYVLGDIANSM 551
K+VL DIA M
Sbjct: 533 TKFVLRDIAKKM 544
>gi|449506734|ref|XP_004162833.1| PREDICTED: probable acyl-activating enzyme 5, peroxisomal-like
[Cucumis sativus]
Length = 576
Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/557 (63%), Positives = 438/557 (78%), Gaps = 10/557 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ LKP PANS PLTP+GF+ERA+ D PSIIY+ TT+TWSQTYRRCL+LASSLSS G
Sbjct: 22 MEHLKPTPANSSPLTPIGFLERASLIYADSPSIIYSSTTFTWSQTYRRCLRLASSLSSIG 81
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I+ GHVVSVIAPN P MYEL FAVPM+GAI + IN RLDARTIS+ L+HSESKL+FVD
Sbjct: 82 IHKGHVVSVIAPNTPPMYELQFAVPMAGAILSCINLRLDARTISVQLRHSESKLLFVDQA 141
Query: 121 SSSLLLEVVSLFPPHSKTPKLV--LITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP 178
SS L+ + ++LFPP P L L+ IS+SS D VD YE+M+ KGDP
Sbjct: 142 SSGLISDALALFPPERNDPCLFSYLMMLLLRISASSVAIG----GDVVDLYEDMVQKGDP 197
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
+F W+RP S+ DP+V+NYT GTTS+PKGVV ++ F + +DSLI+W VPK SV LWTLP
Sbjct: 198 EFRWIRPVSEWDPIVMNYTSGTTSSPKGVVHSHRGIFTVTLDSLIEWGVPKHSVYLWTLP 257
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK 298
MFH NGWSF + A VG TN+C+RKFDA +F+LI +H VTHMCGAP+VLN+L++SP +
Sbjct: 258 MFHANGWSFPFAIAAVGGTNICIRKFDAALIFSLINRHHVTHMCGAPVVLNMLTNSPNNR 317
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
L+RPV+ILTAG+PPPA VLLRTESLGF VSHGYG TE G+ + C+WK +WN+LPA ER
Sbjct: 318 PLERPVKILTAGAPPPAAVLLRTESLGFDVSHGYGLTETGGLVIFCSWKLEWNQLPATER 377
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A LKARQGVRT+ + E D++D TG V+RDG + GEIV+RGGS+MLGY KDPEAT K M
Sbjct: 378 ARLKARQGVRTLAMAEADVLDSGTGKRVQRDGVSIGEIVIRGGSMMLGYFKDPEATKKAM 437
Query: 419 -KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
++G ++TGDVG+MHPDGYLEIKDRSKDVIISGGEN+SS E+ESVLY++P VNEAAVV R
Sbjct: 438 TEEGWFFTGDVGVMHPDGYLEIKDRSKDVIISGGENLSSVEVESVLYTNPAVNEAAVVAR 497
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD FW E PCAFVSL+ G + TE++II+YC+ ++ +MVPKTVVF+++LPKT+TG
Sbjct: 498 PDEFWGETPCAFVSLREGLTR---VPTEEEIIEYCKGKLAGFMVPKTVVFMEQLPKTSTG 554
Query: 538 KVQKYVLGDIANSMSMS 554
K+QK++L ++A SM S
Sbjct: 555 KIQKFLLREMAKSMGCS 571
>gi|18491217|gb|AAL69511.1| putative AMP-binding protein [Arabidopsis thaliana]
Length = 549
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/551 (62%), Positives = 435/551 (78%), Gaps = 9/551 (1%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFG 60
+ +KP ANS PLTP+GF+ERAAT DC SI+Y ++T YTW +T RCL++ASSLSS G
Sbjct: 1 EEMKPCAANSPPLTPIGFLERAATVYGDCTSIVYGSNTVYTWRETNLRCLRVASSLSSIG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I VVSV++PN PAMYEL FAVPMSGAI N INTRLDART+S++L+H ESKL+FVD
Sbjct: 61 IGRSDVVSVLSPNTPAMYELQFAVPMSGAILNNINTRLDARTVSVLLRHCESKLLFVDVF 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S L +E VS+ + P ++++ DKE + + + F TY++++ +GDP F
Sbjct: 121 SVDLAVEAVSMM---TTDPPILVVIADKEEEGGVADVADL--SKFSYTYDDLIERGDPGF 175
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
W+RP+S+ DP+VLNYT GTTSAPKGVV C++ F+++VDSLIDW VPK V LWTLP+F
Sbjct: 176 KWIRPESEWDPVVLNYTSGTTSAPKGVVHCHRGIFVMSVDSLIDWAVPKNPVYLWTLPIF 235
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H+NGW+ WG A VG TNVCLRKFDAP ++ LIR HGVTHMCGAP+VLN+LS++ E++ L
Sbjct: 236 HSNGWTNPWGIAAVGGTNVCLRKFDAPLIYRLIRDHGVTHMCGAPVVLNMLSATQESQPL 295
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
+ PV ILTAGSPPPA VLLR ES+GF++SHGYG TE AGV VSCAWKPKWN LPA +RA
Sbjct: 296 NHPVNILTAGSPPPATVLLRAESIGFVISHGYGLTETAGVIVSCAWKPKWNHLPASDRAR 355
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
LKARQGVRT+G TE+D+VDPE+GLSV+R+G+T GEIVMRG S+MLGYLKDP T K +K+
Sbjct: 356 LKARQGVRTVGFTEIDVVDPESGLSVERNGETVGEIVMRGSSVMLGYLKDPVGTEKALKN 415
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +YTGDVG++H DGYLEIKDRSKD+II+GGEN+SS E+E+VLY+ P VNE AVV RPD
Sbjct: 416 GWFYTGDVGVIHSDGYLEIKDRSKDIIITGGENVSSVEVETVLYTIPAVNEVAVVARPDE 475
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
FW E PCAFVSLK G TE+++++YCR ++P+YMVPKTV F+DELPK++TGKV
Sbjct: 476 FWGETPCAFVSLKNGFSG---KPTEEELMEYCRKKMPKYMVPKTVSFMDELPKSSTGKVT 532
Query: 541 KYVLGDIANSM 551
K+VL DIA M
Sbjct: 533 KFVLRDIAKKM 543
>gi|242095442|ref|XP_002438211.1| hypothetical protein SORBIDRAFT_10g009610 [Sorghum bicolor]
gi|241916434|gb|EER89578.1| hypothetical protein SORBIDRAFT_10g009610 [Sorghum bicolor]
Length = 558
Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/555 (62%), Positives = 425/555 (76%), Gaps = 12/555 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MDRL NPANSCPLTPLGF+ERAAT DC S++Y+DT +TWSQT+RRCL+LAS+L S G
Sbjct: 1 MDRLGSNPANSCPLTPLGFLERAATVFGDCSSVVYHDTVFTWSQTHRRCLRLASALVSLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G +VSV+ PN+PAMYE+ F VPMSGA+ N INTRLDART++++L+HS KLVFVD
Sbjct: 61 ITRGDIVSVLLPNVPAMYEMQFGVPMSGAVLNNINTRLDARTVAVLLRHSGCKLVFVDPA 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S +L+ + + P P+++L+ D E ++P + TYE +L GDP+F
Sbjct: 121 SLTLITDALKQLPHGHPAPRVILVEDPHEKGLPAAPAGSL-------TYERLLENGDPEF 173
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+WVRP S+ +PM+LNYT GTTS PKGVV C++ F+I +DSLI+W VP Q+ LWTLPMF
Sbjct: 174 AWVRPASEWEPMILNYTSGTTSEPKGVVHCHRGLFLITLDSLIEWAVPPQATYLWTLPMF 233
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGWSF WG AVVG TNVCLR+ DA V+A I GVTH+CGAP+VLN+L+++PE +
Sbjct: 234 HANGWSFPWGMAVVGGTNVCLRRVDAGEVYATIAARGVTHLCGAPVVLNMLANAPEVVRR 293
Query: 301 DRP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
P VRILTAG+PPPA VL RTES+GF VSHGYG TE AG+ V C+WK +WNKLPA ER
Sbjct: 294 PLPGKVRILTAGAPPPAAVLHRTESIGFEVSHGYGLTETAGLVVCCSWKREWNKLPASER 353
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A LK+RQGVRT G+ EVDIVD ETG SV RDG T GEIV+RGG +MLGYL D +AT +
Sbjct: 354 ARLKSRQGVRTPGMAEVDIVDGETGRSVPRDGSTMGEIVLRGGCVMLGYLNDDKATGAAI 413
Query: 419 K-DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
+ DG +YTGDVG+MHPDGY+EI+DRSKDVIISGGENISS E+ESVLYSHP VNEAAVV R
Sbjct: 414 REDGWFYTGDVGVMHPDGYMEIRDRSKDVIISGGENISSVEVESVLYSHPAVNEAAVVAR 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD FW E PCAFV LK G +G + T D+I +CR R+P YMVP+TVVF DELPKT+TG
Sbjct: 474 PDDFWGETPCAFVGLKEGASAGAV--TAADVIAWCRQRMPHYMVPRTVVFRDELPKTSTG 531
Query: 538 KVQKYVLGDIANSMS 552
K+QKYVL ++A M
Sbjct: 532 KIQKYVLRNLAKEMG 546
>gi|90399049|emb|CAJ86098.1| H0103C06.2 [Oryza sativa Indica Group]
gi|90399203|emb|CAH68190.1| H0403D02.18 [Oryza sativa Indica Group]
Length = 558
Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/556 (63%), Positives = 426/556 (76%), Gaps = 15/556 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSL-SSF 59
MD+L NPANSC LTPLGF+ERAAT DCPS++Y+DT +TWSQT+RRCL+LAS+L SS
Sbjct: 1 MDKLGANPANSCALTPLGFLERAATVFGDCPSVVYHDTVFTWSQTHRRCLRLASALVSSL 60
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
GI+ G VVSV+ PN+PAMYE+HFAVPMSGA+ N+INTRLDART+S++L+HS SKL+FVD
Sbjct: 61 GISRGDVVSVLLPNVPAMYEMHFAVPMSGAVLNSINTRLDARTVSVLLRHSGSKLIFVDP 120
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+L + + L P P++VL+ D E +P + TYE ++ KGDP+
Sbjct: 121 ALLPVLRDALRLLPAGHTAPRVVLVEDPHEKEFPPAPAAAL-------TYERLVEKGDPE 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F+WVRP S+ DPM+LNYT GTTSAPKGVV C++ F+I VDSL+DW VP + LWTLPM
Sbjct: 174 FAWVRPASEWDPMILNYTSGTTSAPKGVVHCHRGIFLITVDSLVDWAVPPRPTYLWTLPM 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA-- 297
FH NGWSF WG AVVG TNVCLR+ DA VF I + GV H+CGAP+VLN+L+++PE
Sbjct: 234 FHANGWSFPWGMAVVGGTNVCLRRVDAAEVFDTIARRGVNHLCGAPVVLNMLANAPEGVR 293
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
K L VRILTAG+PPPA VL RTE++GF VSHGYG TE AG+ +SCAWK +W+KLPA E
Sbjct: 294 KPLPGKVRILTAGAPPPAAVLYRTEAIGFEVSHGYGLTETAGLVLSCAWKGEWDKLPASE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
RA LKARQGVRT G+ EVD+VD ETG SV RDG T GEIV+RGG + LGYL D AT
Sbjct: 354 RARLKARQGVRTPGMAEVDVVDGETGRSVPRDGSTMGEIVLRGGCITLGYLNDEAATKAA 413
Query: 418 MKD-GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
++D G +YTGDVG+MHPDGY+EI+DRSKDVIISGGENISS E+ESVLY HP VNEAAVV
Sbjct: 414 IRDNGWFYTGDVGVMHPDGYVEIRDRSKDVIISGGENISSVEVESVLYGHPAVNEAAVVA 473
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
RPD FW E PCAFVSLK GG T D++ + R R+PRYMVPKTV+F DELPKT+T
Sbjct: 474 RPDEFWGETPCAFVSLK----QGGGAVTAADVVAWSRERMPRYMVPKTVIFRDELPKTST 529
Query: 537 GKVQKYVLGDIANSMS 552
GK+QKYVL +IA M
Sbjct: 530 GKIQKYVLRNIAKEMG 545
>gi|115461284|ref|NP_001054242.1| Os04g0674700 [Oryza sativa Japonica Group]
gi|38344924|emb|CAE03240.2| OSJNBa0018M05.15 [Oryza sativa Japonica Group]
gi|113565813|dbj|BAF16156.1| Os04g0674700 [Oryza sativa Japonica Group]
gi|215741282|dbj|BAG97777.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 558
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/556 (63%), Positives = 426/556 (76%), Gaps = 15/556 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSL-SSF 59
MD+L NPANSC LTPLGF+ERAAT DCPS++Y+DT +TWSQT+RRCL+LAS+L SS
Sbjct: 1 MDKLGANPANSCALTPLGFLERAATVFGDCPSVVYHDTVFTWSQTHRRCLRLASALVSSL 60
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
GI+ G VVSV+ PN+PAMYE+HFAVPMSGA+ N+INTRLDART+S++L+HS SKL+FVD
Sbjct: 61 GISRGDVVSVLLPNVPAMYEMHFAVPMSGAVLNSINTRLDARTVSVLLRHSGSKLIFVDP 120
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+L + + L P P++VL+ D E +P + TYE ++ KGDP+
Sbjct: 121 ALLPVLRDALRLLPAGHTAPRVVLVEDPHEKEFPPAPAAAL-------TYERLVEKGDPE 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F+WVRP S+ DPM+LNYT GTTSAPKGVV C++ F+I VDSL+DW VP + LWTLPM
Sbjct: 174 FAWVRPASEWDPMILNYTSGTTSAPKGVVHCHRGIFLITVDSLVDWAVPPRPTYLWTLPM 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA-- 297
FH NGWSF WG AVVG TNVCLR+ DA VF I + GV H+CGAP+VLN+L+++PE
Sbjct: 234 FHANGWSFPWGMAVVGGTNVCLRRVDAAEVFDTIARRGVNHLCGAPVVLNMLANAPEGVR 293
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
K L VRILTAG+PPPA VL RTE++GF VSHGYG TE AG+ +SCAWK +W+KLPA E
Sbjct: 294 KPLPGKVRILTAGAPPPAAVLYRTEAIGFEVSHGYGLTETAGLVLSCAWKGEWDKLPASE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
RA LKARQGVRT G+ EVD+VD ETG SV RDG T GEIV+RGG + LGYL D AT
Sbjct: 354 RARLKARQGVRTPGMAEVDVVDGETGRSVPRDGSTMGEIVLRGGCITLGYLNDEAATKAA 413
Query: 418 MKD-GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
++D G +YTGDVG+MHPDGY+EI+DRSKDVIISGGENISS E+ESVLY HP VNEAAVV
Sbjct: 414 IRDNGWFYTGDVGVMHPDGYVEIRDRSKDVIISGGENISSVEVESVLYGHPAVNEAAVVA 473
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
RPD FW E PCAFVSLK GG T D++ + R R+PRYMVPKTV+F DELPKT+T
Sbjct: 474 RPDEFWGETPCAFVSLK----QGGGAVTAADVVAWSRERMPRYMVPKTVIFRDELPKTST 529
Query: 537 GKVQKYVLGDIANSMS 552
GK+QKYVL +IA M
Sbjct: 530 GKIQKYVLRNIAKEMG 545
>gi|242077652|ref|XP_002448762.1| hypothetical protein SORBIDRAFT_06g032750 [Sorghum bicolor]
gi|241939945|gb|EES13090.1| hypothetical protein SORBIDRAFT_06g032750 [Sorghum bicolor]
Length = 560
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/567 (61%), Positives = 429/567 (75%), Gaps = 16/567 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD+L NPANSCPLTPLGF+ER AT DCPS++Y+DT YTWSQT+RRCL+LAS+L S G
Sbjct: 1 MDKLGTNPANSCPLTPLGFLERTATVFGDCPSVVYHDTVYTWSQTHRRCLRLASALVSLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
++ G +VSV+ PN+PAMYE+HF VPMSGA+ NTINTRLDART++++L+HS SKLVF D
Sbjct: 61 VSRGDIVSVLLPNVPAMYEMHFGVPMSGAVLNTINTRLDARTVAVLLRHSGSKLVFADPA 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S L+ + + PP + P++V + D E ++PP + TYE +L +GDP+F
Sbjct: 121 SVPLVRDALRQLPPGHRAPRVVPVEDPHEKEFPAAPPGTL-------TYEALLDRGDPEF 173
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+WVRP+S+ DPM+LNYT GTTSAPKGVV C++ F++ VD+L++W VPKQ LWTLPMF
Sbjct: 174 AWVRPRSEWDPMILNYTSGTTSAPKGVVHCHRGIFLVTVDTLVEWAVPKQPTYLWTLPMF 233
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGW F WG A VG TNVCLR+ A V+A I + GV H+CGAP+VLN+L+++P+A +
Sbjct: 234 HANGWCFPWGMAAVGGTNVCLRRVHAAEVYATIARRGVDHLCGAPVVLNMLANAPDAARR 293
Query: 301 DRP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
P VRILTAG+PPPA VL RTES+GF V+HGYG TE AG+ VSCAWK +WNKLPA ER
Sbjct: 294 PLPGKVRILTAGAPPPAAVLHRTESIGFEVTHGYGLTETAGLVVSCAWKGEWNKLPASER 353
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A LKARQGVRT + EVDIVD ETG SV RDG T GEIV+RGG +MLGYL D AT +
Sbjct: 354 ARLKARQGVRTPAMAEVDIVDGETGHSVPRDGSTMGEIVLRGGCVMLGYLNDDTATRAAI 413
Query: 419 KD-GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
+D G +YTGDVG+MHPDGY+EI+DRSKDVIISGGENISS E+ESVLY+HP VNEAAVV R
Sbjct: 414 RDNGWFYTGDVGVMHPDGYMEIRDRSKDVIISGGENISSVEVESVLYNHPAVNEAAVVAR 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD FW E PCAFVSLK T D+I +CR R+P YMVPKTVV ELPKT+TG
Sbjct: 474 PDEFWGETPCAFVSLKEERSGSPGAVTAADVIAWCRDRMPHYMVPKTVVLRAELPKTSTG 533
Query: 538 KVQKYVLGDIANSM------SMSHSRM 558
K+QKYVL ++A M + S SRM
Sbjct: 534 KIQKYVLRNLAKDMGPTRKGASSSSRM 560
>gi|413944279|gb|AFW76928.1| putative AMP-dependent synthetase and ligase superfamily protein
[Zea mays]
Length = 554
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/558 (63%), Positives = 427/558 (76%), Gaps = 16/558 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MDRL NPANSCPLTPLGF+ER+AT DC S++Y+DT +TWSQT+RRCL+LAS+L S G
Sbjct: 1 MDRLGANPANSCPLTPLGFLERSATVFGDCHSVVYHDTVFTWSQTHRRCLRLASALVSLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
IN G +VSV+ PN+PAMYE+ F VPMSGA+ N IN RLDART++++L+HS SKLVFVD
Sbjct: 61 INRGDIVSVLLPNVPAMYEMQFGVPMSGAVLNNINMRLDARTVAVLLRHSGSKLVFVDPA 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S +L+ + + P P+++ + D E ++PP + TYE +L KGDP+F
Sbjct: 121 SLTLIRDALKQLPQGHPAPRVIPVEDPHEKGLPAAPPGSL-------TYEGLLEKGDPEF 173
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+WVRP S+ DPMVLNYT GTTS PKGVV C++ F+I +DSLI+W VP Q LWTLPMF
Sbjct: 174 AWVRPASEWDPMVLNYTSGTTSEPKGVVHCHRGIFLITLDSLIEWAVPPQPTYLWTLPMF 233
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGWSF WG AVVG TNVCLR+ DA V+A I GV+H+CGAP+VLN+L+++PE +
Sbjct: 234 HANGWSFPWGMAVVGGTNVCLRRVDAAEVYATIAGRGVSHLCGAPVVLNMLANAPEGVRR 293
Query: 301 DRP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
P VRILTAG+PPPA VL RTES+GF V HGYG TE AG+ V CAWK +WNKLPA ER
Sbjct: 294 PLPGKVRILTAGAPPPAAVLHRTESIGFEVIHGYGLTETAGLVVCCAWKGEWNKLPASER 353
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A LKARQGVRT G+ EVDIVD ETG SV RDG T GEIV+RGG +MLGYL D +AT +
Sbjct: 354 ARLKARQGVRTPGMAEVDIVDGETGRSVPRDGSTMGEIVLRGGCVMLGYLDDDKATKAAI 413
Query: 419 KD-GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
+D G +YTGDVG+MHPDGY+EI+DRSKDVIISGGENISS E+ESVLYSHP VNEAAVV R
Sbjct: 414 RDNGWFYTGDVGVMHPDGYMEIRDRSKDVIISGGENISSVEVESVLYSHPAVNEAAVVAR 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD FW E PCAFVSLK + G +T D+I +CR R+P YMVP+TVVF DELPKT+TG
Sbjct: 474 PDDFWGETPCAFVSLK---EEG---STAADVIAWCRQRMPHYMVPRTVVFRDELPKTSTG 527
Query: 538 KVQKYVLGDIANSMSMSH 555
K+QKYVL ++A M +H
Sbjct: 528 KIQKYVLRNLAKEMGSTH 545
>gi|356553214|ref|XP_003544953.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
Length = 554
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/560 (65%), Positives = 442/560 (78%), Gaps = 8/560 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M++LKP+ NS PLTPL F++RAAT PS++YN TT+TWS T RRCLQLASSLSS G
Sbjct: 1 MEQLKPSAPNSSPLTPLAFLDRAATVYAHVPSLVYNHTTFTWSLTRRRCLQLASSLSSLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G VVSV+APN+PAMYELHFAVP +GAI N INTRLDART+S+IL+H+ S+LVFVD
Sbjct: 61 IRRGSVVSVLAPNVPAMYELHFAVPFAGAILNNINTRLDARTVSVILRHANSRLVFVDCA 120
Query: 121 SSSLLLEVVSLFPPH-SKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
S L+LE +SLFP + ++ P L+LITD+ ++P +F+DTYE +++KGDP
Sbjct: 121 SRDLVLEALSLFPENQNQRPTLILITDETVEKEKAAPAVD----NFLDTYEGLVSKGDPG 176
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F WV P S+ DPMVLNYT GTTS+PKGVV C++ FII+VD+LIDW VPK V LWTLPM
Sbjct: 177 FKWVLPNSEWDPMVLNYTSGTTSSPKGVVHCHRGTFIISVDTLIDWAVPKNPVYLWTLPM 236
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGWSF +G A VG TN+C+RKFDA V++LI++H VTHMCGAP+VLN+L++SP+ K
Sbjct: 237 FHANGWSFPYGIAAVGGTNICVRKFDAEIVYSLIKRHHVTHMCGAPVVLNMLTNSPDNKP 296
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L++PV+ILTAG+PPPA VL RTE+LGF+VSHGYG TE G+ VSCAWK +WNKLPA ERA
Sbjct: 297 LEKPVQILTAGAPPPAAVLFRTEALGFVVSHGYGLTETGGLVVSCAWKGEWNKLPATERA 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKARQGVRT G+ EVD+V P TG SVKRDG + GE+VMRGG +MLGYLKDP T+ C K
Sbjct: 357 RLKARQGVRTAGMAEVDVVGP-TGESVKRDGVSIGEVVMRGGCVMLGYLKDPSGTASCFK 415
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
+G +YTGDVG+MH DGYLEIKDRSKDVIISGGEN+SS E+ESVLY HP VNEAAVV RP
Sbjct: 416 NGWFYTGDVGVMHEDGYLEIKDRSKDVIISGGENLSSVEVESVLYGHPAVNEAAVVARPH 475
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
+W E PCAFVSLK TEK+II+YCR +P YMVP+TV+F DELPKT+TGK+
Sbjct: 476 EYWGETPCAFVSLKR-EIKEKEKPTEKEIIEYCRDNMPHYMVPRTVIFKDELPKTSTGKI 534
Query: 540 QKYVLGDIANSM-SMSHSRM 558
QK+VL IA M S + SR+
Sbjct: 535 QKFVLRQIAKEMGSFTQSRI 554
>gi|414584805|tpg|DAA35376.1| TPA: putative AMP-dependent synthetase and ligase superfamily
protein [Zea mays]
Length = 556
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/567 (61%), Positives = 429/567 (75%), Gaps = 20/567 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MDRL NPANSCPLTPLGF+ER AT DCPS++Y+DT YTWSQT+RRCL+LAS+L S G
Sbjct: 1 MDRLGANPANSCPLTPLGFLERTATVYGDCPSVVYHDTVYTWSQTHRRCLRLASALVSLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
++ G +VSV+ PN+PAMYE+HF VPMSGA+ NTINTRLDART+S++L+H+ SKLVF D
Sbjct: 61 VSRGDIVSVLLPNVPAMYEMHFGVPMSGAVLNTINTRLDARTVSVLLRHAGSKLVFADPA 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S L+ + +S PP P++V + D E ++ P + TYE +L GDP+F
Sbjct: 121 SMPLVRDALSQLPPGHPAPRVVPVEDPHETEFPAAAPGAL-------TYEALLDGGDPEF 173
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+WVRP S+ DPM+LNYT GTTSAPKGVV C++ F++ VD+L++W VP + LWTLPMF
Sbjct: 174 AWVRPASEWDPMILNYTSGTTSAPKGVVHCHRGIFLVTVDALVEWAVPPRPTYLWTLPMF 233
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGW F WG A VG TNVCLR+ DA V+ I + GV H+CGAP+VLN+L+++P+A +
Sbjct: 234 HANGWCFPWGMAAVGGTNVCLRRVDAAEVYDAIARRGVDHLCGAPVVLNMLANAPDAARR 293
Query: 301 DRP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
P VRILTAG+PPPA VL RTES+GF V+HGYG TE AG+ V CAWK +WNKLPA ER
Sbjct: 294 PLPGKVRILTAGAPPPAAVLHRTESIGFEVTHGYGLTETAGLVVCCAWKREWNKLPASER 353
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A LKARQGVRT G+ EVDIVD ETG SV RDG T GEIV+RGG +MLGYL D +AT +
Sbjct: 354 ARLKARQGVRTPGMNEVDIVDGETGRSVPRDGSTMGEIVLRGGGVMLGYLNDDKATRAAI 413
Query: 419 KD-GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
+D G +YTGDVG+MHPDGY+EI+DRSKDVIISGGENISS E+ESVLY+HP VNEAAVV R
Sbjct: 414 RDNGWFYTGDVGVMHPDGYMEIRDRSKDVIISGGENISSVEVESVLYNHPAVNEAAVVAR 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD FW E PCAFVSLK G+ + T D+I +CR R+P YMVPKTVV ELPKT+TG
Sbjct: 474 PDEFWGETPCAFVSLKEGSGA----VTAADVIAWCRDRMPHYMVPKTVVLRAELPKTSTG 529
Query: 538 KVQKYVLGDIANSM------SMSHSRM 558
K+QKYVL ++A M + S SRM
Sbjct: 530 KIQKYVLRNLAKEMGPTRKGASSSSRM 556
>gi|380042370|gb|AFD33349.1| acyl-activating enzyme 5 [Cannabis sativa]
Length = 575
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/553 (62%), Positives = 428/553 (77%), Gaps = 5/553 (0%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSF- 59
M+ LKP ANSCPLTPLGF+ERA+ D S++YND +YTWSQT+ RCL++AS + SF
Sbjct: 7 MEELKPRFANSCPLTPLGFLERASIVYGDSISVVYNDLSYTWSQTHTRCLRVASCIESFL 66
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
G+ G VVSV+APNIP MYEL+FAVPM+G I N INTRL+A TIS++L+HSESKLVFVD
Sbjct: 67 GVKKGQVVSVVAPNIPPMYELNFAVPMAGVILNNINTRLNAVTISVMLRHSESKLVFVDQ 126
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
LS L+L+ V+LFP ++ TP LVLITD+ I+ +S FV YE ++ KG
Sbjct: 127 LSVRLVLDAVNLFPKNTPTPLLVLITDE-SITDQTSLTDVKDLERFVCCYEELVEKGSEN 185
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F WVRP ++ DP+VLNYT GTTS+PKGVV ++ F++ +DSLIDW VPKQ V LWTLPM
Sbjct: 186 FKWVRPVNEWDPIVLNYTSGTTSSPKGVVHSHRGVFVVTLDSLIDWGVPKQPVYLWTLPM 245
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW +TWG A VGATNVCLR+FD +F LIR+H VTHMC APIVLN+LS+SP A
Sbjct: 246 FHANGWGYTWGTAAVGATNVCLRRFDGEIIFNLIRRHRVTHMCAAPIVLNMLSNSPNAGP 305
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L PV ++T G+PPPA VLLRTESLGF++SHGYG TE+ GV VSCAWK +WN PA ERA
Sbjct: 306 LPNPVHVMTGGAPPPAAVLLRTESLGFVISHGYGMTEMLGVVVSCAWKKEWNMFPATERA 365
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LK+RQGVRT +TEVD+VDP +G+SVKRDG T GEIV++G +MLGYLK+ AT+KC++
Sbjct: 366 RLKSRQGVRTAAMTEVDVVDPNSGVSVKRDGLTMGEIVLKGSCVMLGYLKNSTATAKCIR 425
Query: 420 DGR-YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
DG +YTGD+ +MHPDGYLEIKDRSKDVIISGGEN+SS E+ES LYSHP V+EAAVV P
Sbjct: 426 DGGWFYTGDMAVMHPDGYLEIKDRSKDVIISGGENVSSVEVESALYSHPAVDEAAVVACP 485
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
D +W E P AFV+LK G + TEK+I++YCR ++ +MVPK VVF D+LPKT+TGK
Sbjct: 486 DEYWGETPLAFVTLKKGAVR--VTVTEKEILEYCREKLAHFMVPKVVVFRDKLPKTSTGK 543
Query: 539 VQKYVLGDIANSM 551
+QK+ L +I SM
Sbjct: 544 IQKFTLKEIVKSM 556
>gi|260446984|emb|CBG76266.1| OO_Ba0005L10-OO_Ba0081K17.17 [Oryza officinalis]
Length = 559
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/556 (63%), Positives = 427/556 (76%), Gaps = 13/556 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSL-SSF 59
MD+L NPANSC LTPLGF++RAAT DCPS++Y+DT +TWSQT+RRCL+LAS+L SS
Sbjct: 1 MDKLGANPANSCALTPLGFLDRAATVFGDCPSVVYHDTVFTWSQTHRRCLRLASALVSSL 60
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
GI+ G VVSV+ PN+PAMYE+HFAVPMSGA+ N+INTRLDART+S++L+HS SKL+FVD
Sbjct: 61 GISRGDVVSVLLPNVPAMYEMHFAVPMSGAVLNSINTRLDARTVSVLLRHSGSKLIFVDP 120
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+L + + L P P++VL+ D E PP +P TYE +L KGDP+
Sbjct: 121 ALLPVLRDALRLLPAGHTAPRVVLVEDPHE---EELPP--VPATAL--TYERLLEKGDPE 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F+WVRP S+ DPM+LNYT GTTSAPKGVV C++ F+I VDSL+DW VP + LWTLPM
Sbjct: 174 FAWVRPASEWDPMILNYTSGTTSAPKGVVHCHRGIFLITVDSLVDWAVPPRPTYLWTLPM 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA-- 297
FH NGWSF WG AVVG TNVCLR+ DA V+ I + GV H+CGAP+VLN+L+++P+
Sbjct: 234 FHANGWSFPWGMAVVGGTNVCLRRVDAAEVYDTIARRGVNHLCGAPVVLNMLANAPDGVR 293
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
K L VRILTAG+PPPA VL RTE++GF VSHGYG TE AG+ +SCAWK +W+KLPA E
Sbjct: 294 KSLPGKVRILTAGAPPPAAVLYRTEAIGFEVSHGYGLTETAGLVLSCAWKGEWDKLPASE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
RA LKARQGVRT G+ EVD+VD ETG SV RDG T GEIV+RGG + LGYL D AT
Sbjct: 354 RARLKARQGVRTPGMAEVDVVDGETGRSVPRDGSTMGEIVLRGGCITLGYLNDEAATRAA 413
Query: 418 MKD-GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
+++ G +YTGDVG+MHPDGY+EI+DRSKDVIISGGENISS E+ESVLY HP VNEAAVV
Sbjct: 414 IRENGWFYTGDVGVMHPDGYVEIRDRSKDVIISGGENISSVEVESVLYGHPAVNEAAVVA 473
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
RPD FW E PCAFVSLK G + T D+I + R R+PRYMVPKTVVF DELPKT+T
Sbjct: 474 RPDEFWGETPCAFVSLKQGGAA--GAVTAADVIAWSRGRMPRYMVPKTVVFRDELPKTST 531
Query: 537 GKVQKYVLGDIANSMS 552
GK+QKYVL +IA M
Sbjct: 532 GKIQKYVLRNIAKEMG 547
>gi|326498349|dbj|BAJ98602.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 555
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/555 (62%), Positives = 422/555 (76%), Gaps = 13/555 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M++L NPANSCPLTPLGFIERAAT DCPS++Y DT +TWSQT+RRCL+LAS+L+S G
Sbjct: 1 MEKLGANPANSCPLTPLGFIERAATVYGDCPSVVYGDTVFTWSQTHRRCLRLASALASLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
++ VVSV+ PN+PAMYE HF VPMSGA+ N+INTRLDART+S++L+HS SKL+ VD
Sbjct: 61 VSRRDVVSVLLPNVPAMYEAHFGVPMSGAVLNSINTRLDARTVSVLLRHSGSKLILVDPA 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
+L E + L PP P++VL+ D +E S +P + TYE +L GDP+F
Sbjct: 121 LVPVLGEALRLLPPGHPAPRVVLVEDPQEKDFSPAPAAAL-------TYEKLLEMGDPEF 173
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
WVRP S+ DPM+LNYT GTTSAPKGVV C++ F++ +DSL+ W VP+Q LWTLPMF
Sbjct: 174 RWVRPASEWDPMILNYTSGTTSAPKGVVHCHRGIFVVTMDSLVSWSVPEQPTYLWTLPMF 233
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGWSF WG AVVG TNVCLR+ DA V+ I + GVTH+CGAP+VLN+L+++PE +
Sbjct: 234 HANGWSFPWGMAVVGGTNVCLRRVDAAEVYDTIARRGVTHLCGAPVVLNMLANAPEGVRR 293
Query: 301 DRP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
P V ILTAG+PPPA VL RTE++GF VSHGYG TE AG+ + CAWK +WNKLPA ER
Sbjct: 294 PLPGKVHILTAGAPPPAAVLGRTEAIGFDVSHGYGLTETAGLVLLCAWKGEWNKLPASER 353
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A LKARQGVRT G+ EVDIVD ETG SV RDG T GEIV+RGG + +GY KD +AT +
Sbjct: 354 ARLKARQGVRTPGMAEVDIVDGETGRSVPRDGATMGEIVLRGGCVTMGYFKDEDATRAAI 413
Query: 419 K-DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
+ DG +YTGDVG+MHPDGYLEI+DRS+DVIISGGENISS E+ES+LY HP VNEAAVV R
Sbjct: 414 RDDGWFYTGDVGVMHPDGYLEIRDRSRDVIISGGENISSVEVESLLYGHPAVNEAAVVAR 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD FW E PCAFVSLK G G + T ++I + R R+P YMVPKTVVF ELPKT+TG
Sbjct: 474 PDEFWGETPCAFVSLKEGA---GGVVTAAEVIAWSRERMPGYMVPKTVVFRAELPKTSTG 530
Query: 538 KVQKYVLGDIANSMS 552
K+QKYVL ++A M
Sbjct: 531 KIQKYVLRNLAKEMG 545
>gi|226496297|ref|NP_001152382.1| AMP-binding protein [Zea mays]
gi|195655729|gb|ACG47332.1| AMP-binding protein [Zea mays]
Length = 554
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/558 (62%), Positives = 422/558 (75%), Gaps = 16/558 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MDRL NPANSCPLTPLGF+ER+AT DC S++Y+DT +TWSQT+RRCL+LAS+L S G
Sbjct: 1 MDRLGANPANSCPLTPLGFLERSATVFGDCHSVVYHDTVFTWSQTHRRCLRLASALVSLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
IN G +VSV+ PN+PAMYE+ F VPMSGA+ N IN RLDART++++L+HS SKLVFVD
Sbjct: 61 INRGDIVSVLLPNVPAMYEMQFGVPMSGAVLNNINMRLDARTVAVLLRHSGSKLVFVDPA 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S +L+ + + P P+++ + D E ++PP + TYE +L KGDP+F
Sbjct: 121 SLTLIRDALKQLPQGHPAPRVIPVEDPHEKGLPAAPPGSL-------TYEGLLEKGDPEF 173
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+WVRP S+ DPMVLNYT GTTS PKGVV C++ F+I +DSLI+W VP Q LWTLPMF
Sbjct: 174 AWVRPASEWDPMVLNYTSGTTSEPKGVVHCHRGIFLITLDSLIEWAVPPQPTYLWTLPMF 233
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGWSF WG AVVG TNVCLR+ DA V+A I GV+H+CGAP+VLN+L+++PE +
Sbjct: 234 HANGWSFPWGMAVVGGTNVCLRRVDAAEVYATIAGRGVSHLCGAPVVLNMLANAPEGVRR 293
Query: 301 DRP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
P VRILTAG+PPPA VL RTES+GF V HGYG TE AG+ V CAWK +WNKLPA ER
Sbjct: 294 PLPGKVRILTAGAPPPAAVLHRTESIGFEVIHGYGLTETAGLVVCCAWKGEWNKLPASER 353
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A LKARQGVRT G+ EVDIVD ETG SV DG GEIV+ GG +MLGYL D +A +
Sbjct: 354 ARLKARQGVRTPGMAEVDIVDGETGXSVPXDGSXMGEIVLXGGCVMLGYLDDDKAXKXAI 413
Query: 419 KD-GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
+D G +YTGDVG+MHPDGY+EI+DRSKDVII GGENISS E+ESVLYSHP VNEAAVV R
Sbjct: 414 RDNGWFYTGDVGVMHPDGYMEIRDRSKDVIIXGGENISSVEVESVLYSHPAVNEAAVVAR 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD FW E PCAFVSLK + G +T D+I +CR R+P YMVP+TVVF DELPKT+TG
Sbjct: 474 PDDFWGETPCAFVSLK---EEG---STAADVIAWCRQRMPHYMVPRTVVFRDELPKTSTG 527
Query: 538 KVQKYVLGDIANSMSMSH 555
K+QKYVL ++A M +H
Sbjct: 528 KIQKYVLRNLAKEMGSTH 545
>gi|297839481|ref|XP_002887622.1| hypothetical protein ARALYDRAFT_339769 [Arabidopsis lyrata subsp.
lyrata]
gi|297333463|gb|EFH63881.1| hypothetical protein ARALYDRAFT_339769 [Arabidopsis lyrata subsp.
lyrata]
Length = 703
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/554 (60%), Positives = 424/554 (76%), Gaps = 15/554 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSF 59
M+ LKP+ ANS PLTPLGF+ERAAT D SI+Y N T YTW +T RCL++AS+LSS
Sbjct: 162 MEGLKPSAANSSPLTPLGFLERAATVYGDFTSIVYGNSTVYTWQETNLRCLRVASALSSI 221
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
GI VVSV++ N P MYEL FAVPM GAI N +NTRLDA+T+S++L+H ESKL+FVD
Sbjct: 222 GIGRSDVVSVLSANTPEMYELQFAVPMCGAILNNLNTRLDAQTVSVLLRHCESKLLFVDV 281
Query: 120 LSSSLLLEVV-SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP 178
S L++E + +L P P LVLI D +E ++ + + F Y +++ +G+P
Sbjct: 282 FYSDLVVEAIATLLNP----PILVLIADQEEGAAVVTERSK-----FCYLYSDLVKRGNP 332
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
F W+RP+S+ DP+V+NYT GTTS+PKGVV C++ F++A+DSL DW VPK V LWTLP
Sbjct: 333 DFKWIRPESEWDPIVVNYTSGTTSSPKGVVHCHRGIFVMALDSLTDWAVPKNPVYLWTLP 392
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK 298
+FH NGW++ WG A VG TNVC+RK AP ++ LIR HGVTHMCGAPI+L +LS+S E++
Sbjct: 393 IFHANGWTYPWGIAAVGGTNVCVRKLHAPLLYRLIRDHGVTHMCGAPILLQILSASQESE 452
Query: 299 Q-LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
Q L PV+ LTAGS PPA VLLR ESLGFIVSHGYG TE AGV VSCAW PKWN+LPA +
Sbjct: 453 QPLKNPVKFLTAGSAPPATVLLRAESLGFIVSHGYGLTETAGVIVSCAWNPKWNRLPASD 512
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A LK+RQGVRT+G +E+D+VDPE+G V+RDG T GEIVMRG S+MLGYLKDP T K
Sbjct: 513 QARLKSRQGVRTVGFSEIDVVDPESGRRVERDGATFGEIVMRGSSIMLGYLKDPIGTQKS 572
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
K+G ++TGDVG++H DGYLEIKDRSKDVIISGGEN+SS E+E+VLY++P VNEAAVV R
Sbjct: 573 FKNGWFFTGDVGVIHGDGYLEIKDRSKDVIISGGENVSSVEVEAVLYTNPAVNEAAVVAR 632
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD FW E PCAFVSLK G T+K+II+YC+ ++PRYMVPKTV F++ELPK++TG
Sbjct: 633 PDEFWGETPCAFVSLKPGLTR---KPTDKEIIEYCKKKMPRYMVPKTVSFLEELPKSSTG 689
Query: 538 KVQKYVLGDIANSM 551
K+ K +L +IA M
Sbjct: 690 KITKLLLKEIAKKM 703
>gi|242092676|ref|XP_002436828.1| hypothetical protein SORBIDRAFT_10g009600 [Sorghum bicolor]
gi|241915051|gb|EER88195.1| hypothetical protein SORBIDRAFT_10g009600 [Sorghum bicolor]
Length = 552
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/558 (60%), Positives = 419/558 (75%), Gaps = 15/558 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ L NPANSCPLTPLGF+ERAAT DCPS++Y DT +TWSQT+RRCL+LAS+L S G
Sbjct: 1 MENLDSNPANSCPLTPLGFLERAATVFGDCPSVVYQDTVFTWSQTHRRCLRLASALVSLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G +VSV+ PN+PAMYE+ F VPMSGA+ N INTRLDART++++L+HS SKLVFVD
Sbjct: 61 ITRGDIVSVLLPNVPAMYEMQFGVPMSGAVLNNINTRLDARTVAVLLRHSGSKLVFVDAS 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S L+ + + L PP P+++ + D E PAD + TYE +LA GDP+F
Sbjct: 121 SLQLISDALRLLPPGHPAPRVIPVEDPHEEDEF--------PADTL-TYERLLADGDPEF 171
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+WV+P S+ DPMVLNYT GTTS PKGVV C++ F+I VDSL++W VP + LWTLPMF
Sbjct: 172 AWVQPASEWDPMVLNYTSGTTSEPKGVVHCHRGLFLITVDSLMEWAVPTRPTYLWTLPMF 231
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGWSF WG AVVG TNVCLR+ +A TV+A I GVTH+C AP+VLN+L+++ + +
Sbjct: 232 HANGWSFPWGMAVVGGTNVCLRRVNAATVYAAIASRGVTHLCCAPVVLNMLANAHDGVRR 291
Query: 301 DRP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
P VRI TAG+PPPA VL RTE++GF +SHGYG TE AG+ VSC WK +W+ LPA ER
Sbjct: 292 PLPGKVRIRTAGAPPPAAVLQRTEAIGFEISHGYGLTETAGLPVSCTWKGEWDSLPAPER 351
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A LKARQGVRT +VD++D ETG SV RDG T GEIV+RGG +MLGYL D EAT +
Sbjct: 352 ARLKARQGVRTPATGKVDVIDSETGRSVPRDGATMGEIVVRGGCVMLGYLNDDEATKAAI 411
Query: 419 K-DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
+ DG +YTGDVG+MHPDGYLEI+DRSKDVII+ GENISS E+ESVLY HP VNEAAVV R
Sbjct: 412 REDGWFYTGDVGVMHPDGYLEIRDRSKDVIINAGENISSVEVESVLYDHPAVNEAAVVAR 471
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD E PCAFVSLK D+ G +T D+I +CR R+P+YMVP+TVVF ELPKT+TG
Sbjct: 472 PDELRGETPCAFVSLK--EDAAGTVTA-ADVIAWCRERMPQYMVPRTVVFHAELPKTSTG 528
Query: 538 KVQKYVLGDIANSMSMSH 555
K+QKYVL ++A M +H
Sbjct: 529 KIQKYVLRNLAMEMGPAH 546
>gi|1903034|emb|CAA64328.1| amp-binding protein [Brassica napus]
Length = 552
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/555 (58%), Positives = 427/555 (76%), Gaps = 8/555 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSS-- 58
M+ L P+P+NS PLT LGF++RAA D PS++++ TT+TWS+T+ RCL++AS+LSS
Sbjct: 1 MELLLPHPSNSSPLTVLGFLDRAAAVYGDSPSLLHDTTTHTWSETHSRCLRVASTLSSSS 60
Query: 59 FGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD 118
GIN G VVSVI PN+P++YEL FAVPMSGA+ N IN RLDA +S++L+HSESKLVFVD
Sbjct: 61 LGINRGQVVSVIGPNVPSVYELQFAVPMSGAVLNNINPRLDAHALSVVLRHSESKLVFVD 120
Query: 119 HLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISS-SSSPPPRIPPADFVDTYENMLAKGD 177
H SSSL+LE +S P + K P+LVL+ DD IS ++ DF+DTYE ++ +GD
Sbjct: 121 HHSSSLVLEALSFLPKNEK-PRLVLLQDDSNISGLTNMSASSSADVDFLDTYEGVMERGD 179
Query: 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
P+F WVRP ++ +PMVLNYT GTTS+PKGVV ++A F+ V+SL+ W +P + V LWTL
Sbjct: 180 PRFKWVRPNNEWNPMVLNYTSGTTSSPKGVVLSHRAVFMSTVNSLLYWSMPNRPVYLWTL 239
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
PMFH NGW +TW A VGATN+C+R+ DAPT+F LI KH VTHMC AP+VLN+L++ P
Sbjct: 240 PMFHANGWGYTWATAAVGATNICVRRVDAPTIFELIDKHQVTHMCAAPMVLNMLTNYPSR 299
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
KQL RPV+I+TAG+PPPA V+ ESLGF V+HGYG TE G+ V+CAWKP+W+ L E
Sbjct: 300 KQLKRPVQIMTAGAPPPATVISSAESLGFDVAHGYGLTETGGLVVTCAWKPEWDGLGQDE 359
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
RA LK+RQG+RT E D++D TG SVK DG T GEIV RGG +MLGY DPE T+
Sbjct: 360 RARLKSRQGIRTAVFAEADVLDTLTGKSVKHDGVTVGEIVFRGGCVMLGYYNDPEGTAAS 419
Query: 418 MK-DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
M+ DG +YTGD+G+MHPDGYLE+KDRSKDVII GGENISSTE+E+VLY++P V EAAVV
Sbjct: 420 MREDGWFYTGDIGVMHPDGYLEVKDRSKDVIICGGENISSTEVETVLYTNPAVKEAAVVA 479
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
+PD W E PCAFVSLK +D G + TE+++ ++C+ ++P+YMVP+ VVF++ELPKT+T
Sbjct: 480 KPDKMWGETPCAFVSLKC-SDRGSV--TEREVREFCKKKLPKYMVPRNVVFMEELPKTST 536
Query: 537 GKVQKYVLGDIANSM 551
GK+QK++L +A S+
Sbjct: 537 GKIQKFLLRQMAKSL 551
>gi|357166712|ref|XP_003580813.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Brachypodium
distachyon]
Length = 576
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/564 (61%), Positives = 422/564 (74%), Gaps = 19/564 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD+L PN ANSCPLTPLGF+ERAAT DCPS++Y+ TWSQT RRCL+LAS+L S G
Sbjct: 1 MDKLGPNAANSCPLTPLGFLERAATVYGDCPSVVYHGAASTWSQTRRRCLRLASALVSLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I+ VVSV+ PN+PAMYE HF VPMSGA+ N+INTRLDART+S++L+HS SKLVFVD
Sbjct: 61 ISRRDVVSVLLPNVPAMYEAHFGVPMSGAVLNSINTRLDARTVSVLLRHSGSKLVFVDPA 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENML-AKGDPQ 179
S LL E + L PP P ++L+ D E P P TYE +L +GDP+
Sbjct: 121 FSPLLHEALCLLPPDHPPPLVILVEDPHEKKEQFPPVP--ASMAISTTYERLLEERGDPE 178
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F+WVRP+S+ DPMVLNYT GTTSAPKGVV C++A F++ +DSL+ W VP++ LWTLPM
Sbjct: 179 FAWVRPESEWDPMVLNYTSGTTSAPKGVVHCHRAIFLVTLDSLVSWGVPERPTYLWTLPM 238
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGWSF WG AV G TNVCLR+ DA V+A I +H V+H+CGAP+VLN+L+++PE+ +
Sbjct: 239 FHANGWSFPWGMAVAGGTNVCLRRVDAREVYAAIAQHRVSHLCGAPVVLNMLANAPESAR 298
Query: 300 LDRP-----VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWK-PKWNKL 353
P VRILTAG+PPPA VL RTE+LGF VSHGYG TE AG+ +SCAWK +WNKL
Sbjct: 299 RPLPEGAHKVRILTAGAPPPAAVLGRTEALGFDVSHGYGLTETAGLVISCAWKGDQWNKL 358
Query: 354 PARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
PA ERA LKARQGVRT G+ EVDIVD TG SV RDG T GEIV+RGG L LGY KD A
Sbjct: 359 PASERARLKARQGVRTPGMAEVDIVDAVTGRSVPRDGATMGEIVLRGGCLTLGYYKDEAA 418
Query: 414 TSKCMK------DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHP 467
T ++ +G +YTGDVG+MHPDGYLEI+DRSKDVIISGGENISS E+E+VLY HP
Sbjct: 419 TRAAIRGTGAGEEGWFYTGDVGVMHPDGYLEIRDRSKDVIISGGENISSVEVEAVLYGHP 478
Query: 468 MVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVF 527
V+EAAVV RPD FW E PCAF+SLK G+ T +++I + R R+ YMVPKTVVF
Sbjct: 479 AVDEAAVVARPDEFWGETPCAFLSLK----KKGVNVTAEEVIAWSRERMAGYMVPKTVVF 534
Query: 528 IDELPKTATGKVQKYVLGDIANSM 551
DELPKT+TGKVQK+VL ++A+ M
Sbjct: 535 RDELPKTSTGKVQKFVLRNMASEM 558
>gi|145323968|ref|NP_001077573.1| pMF8-like amp-binding protein [Arabidopsis thaliana]
gi|75311431|sp|Q9LPK7.1|AEE10_ARATH RecName: Full=Probable acyl-activating enzyme 10; AltName:
Full=AMP-binding protein 10; Short=AtAMPBP10
gi|9454578|gb|AAF87901.1|AC015447_11 Putative amp-binding protein [Arabidopsis thaliana]
gi|91805819|gb|ABE65638.1| AMP-binding protein [Arabidopsis thaliana]
gi|332191993|gb|AEE30114.1| pMF8-like amp-binding protein [Arabidopsis thaliana]
Length = 549
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/557 (58%), Positives = 430/557 (77%), Gaps = 13/557 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSL--S 57
M+ L P+P+NS PLT LGF++RAA+ DCPSI++ +T +TWS+T+ RCL++AS+L S
Sbjct: 1 MELLLPHPSNSTPLTVLGFLDRAASVYGDCPSILHTANTVHTWSETHNRCLRIASALTSS 60
Query: 58 SFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFV 117
S GI G VVSV+ PN+P++YEL FAVPMSGAI N IN RLDA +S++L+HSES+LVFV
Sbjct: 61 SIGIKQGQVVSVVGPNVPSVYELQFAVPMSGAILNNINPRLDAHALSVLLRHSESRLVFV 120
Query: 118 DHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD 177
DH S SL+LE VSLF H K P LVL+ DD+E SSS+ +DF+DTYE ++ +G+
Sbjct: 121 DHRSISLVLEAVSLFTQHEK-PHLVLLDDDQENDSSSA-------SDFLDTYEEIMERGN 172
Query: 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
+F W+RP+++ PMVLNYT GTTS+PKGVV ++A F++ V SL+DW VP + V LWTL
Sbjct: 173 SRFKWIRPQTEWQPMVLNYTSGTTSSPKGVVLSHRAIFMLTVSSLLDWSVPNRPVYLWTL 232
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
PMFH NGW +TWG A VGATN+C R+ DAPT++ LI KH VTHMC AP+VLN+L + P +
Sbjct: 233 PMFHANGWGYTWGTAAVGATNICTRRVDAPTIYNLIDKHNVTHMCAAPMVLNMLINYPLS 292
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
L PV+++T+G+PPPA ++ R ESLGF VSH YG TE +G VSCAWKPKW+ L E
Sbjct: 293 TPLKNPVQVMTSGAPPPATIISRAESLGFNVSHSYGLTETSGPVVSCAWKPKWDHLDPLE 352
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
RA LK+RQGVRT+G TEVD+ D +TG SVK DG + GEIV RG S+MLGY KDP+ T+ C
Sbjct: 353 RARLKSRQGVRTLGFTEVDVRDRKTGKSVKHDGVSVGEIVFRGSSVMLGYYKDPQGTAAC 412
Query: 418 MK-DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
M+ DG +Y+GD+G++H DGYLEIKDRSKDVII GGENISS EIE+VLY++P+V EAAVV
Sbjct: 413 MREDGWFYSGDIGVIHKDGYLEIKDRSKDVIICGGENISSAEIETVLYTNPVVKEAAVVA 472
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMM-TTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
+PD W E PCAFVSLK + G + TE++I ++C+ ++P+YMVP+ V+F +ELPKT+
Sbjct: 473 KPDKMWGETPCAFVSLKCDNNGDGSVPVTEREIREFCKTKLPKYMVPRKVIFQEELPKTS 532
Query: 536 TGKVQKYVLGDIANSMS 552
TGK+QK++L +A ++S
Sbjct: 533 TGKIQKFLLRQMAKTLS 549
>gi|116830899|gb|ABK28406.1| unknown [Arabidopsis thaliana]
Length = 550
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/557 (58%), Positives = 429/557 (77%), Gaps = 13/557 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSL--S 57
M+ L P+P+NS PLT LGF++RAA+ DCPSI++ +T +TWS+T+ RCL++AS+L S
Sbjct: 1 MELLLPHPSNSTPLTVLGFLDRAASVYGDCPSILHTANTVHTWSETHNRCLRIASALTSS 60
Query: 58 SFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFV 117
S GI G VVSV+ PN+P++YEL FAVPMSGAI N IN RLDA +S++L+HSES+LVFV
Sbjct: 61 SIGIKQGQVVSVVGPNVPSVYELQFAVPMSGAILNNINPRLDAHALSVLLRHSESRLVFV 120
Query: 118 DHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD 177
DH S SL+LE VSLF H K P LVL+ DD+E SSS+ +DF+DTYE ++ +G+
Sbjct: 121 DHRSISLVLEAVSLFTQHEK-PHLVLLDDDQENDSSSA-------SDFLDTYEEIMERGN 172
Query: 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
+F W+RP+++ PMVLNYT GTTS+PKGVV ++A F++ V SL+DW VP + V LWTL
Sbjct: 173 SRFKWIRPQTEWQPMVLNYTSGTTSSPKGVVLSHRAIFMLTVSSLLDWSVPNRPVYLWTL 232
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
PMFH NGW +TWG A VGATN+C R+ DAPT++ LI KH VTHMC AP+VLN+L + P +
Sbjct: 233 PMFHANGWGYTWGTAAVGATNICTRRVDAPTIYNLIDKHNVTHMCAAPMVLNMLINYPLS 292
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
L PV+++T+G+PPPA ++ R ESLGF VSH YG TE +G VSCAWKPKW+ L E
Sbjct: 293 TPLKNPVQVMTSGAPPPATIISRAESLGFNVSHSYGLTETSGPVVSCAWKPKWDHLDPLE 352
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
RA LK+RQGVRT+G TEVD+ D +TG SVK DG GEIV RG S+MLGY KDP+ T+ C
Sbjct: 353 RARLKSRQGVRTLGFTEVDVRDRKTGKSVKHDGVLVGEIVFRGSSVMLGYYKDPQGTAAC 412
Query: 418 MK-DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
M+ DG +Y+GD+G++H DGYLEIKDRSKDVII GGENISS EIE+VLY++P+V EAAVV
Sbjct: 413 MREDGWFYSGDIGVIHKDGYLEIKDRSKDVIICGGENISSAEIETVLYTNPVVKEAAVVA 472
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMM-TTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
+PD W E PCAFVSLK + G + TE++I ++C+ ++P+YMVP+ V+F +ELPKT+
Sbjct: 473 KPDKMWGETPCAFVSLKCDNNGDGSVPVTEREIREFCKTKLPKYMVPRKVIFQEELPKTS 532
Query: 536 TGKVQKYVLGDIANSMS 552
TGK+QK++L +A ++S
Sbjct: 533 TGKIQKFLLRQMAKTLS 549
>gi|356499050|ref|XP_003518357.1| PREDICTED: 2-succinylbenzoate--CoA ligase-like [Glycine max]
Length = 553
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/551 (61%), Positives = 411/551 (74%), Gaps = 12/551 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD L PNPANS PLTPL F+ERAA D SI+YN T++TWSQT+RRCLQLASSL+S G
Sbjct: 1 MDDLTPNPANSPPLTPLTFLERAAIVYGDSHSILYNRTSFTWSQTHRRCLQLASSLTSLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ GHV+SV++PN P+MYELHFAVPM GAI N +N RL+ +S++L+HSESKLVFV
Sbjct: 61 LGRGHVISVLSPNTPSMYELHFAVPMCGAILNNLNLRLNPHILSVLLRHSESKLVFVHSH 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S L+L +S FP + P LVLITDD + + S A +DTYE ++ KG+P F
Sbjct: 121 SLPLILRALSNFPKTTPRPSLVLITDDADAVTVSL-------AHVIDTYEGLIKKGNPNF 173
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
W RP S+ DP+ LNYT GTTS+PKGVV ++A FI+A+DSLIDW VPKQ V LWTLPMF
Sbjct: 174 HWARPNSEWDPITLNYTSGTTSSPKGVVHSHRATFIMALDSLIDWCVPKQPVYLWTLPMF 233
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H+NGW+F WG A G TNVC RK DAP ++ LI+ H VTHMC AP+VLNLL + E +
Sbjct: 234 HSNGWTFPWGIAAAGGTNVCPRKIDAPMIYHLIQSHNVTHMCAAPVVLNLLLTRTEP--V 291
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
PV +LT GSPPPA +L R E LGF V HGYG TE GV VSCAWK +W+K PA ERA
Sbjct: 292 KNPVHVLTGGSPPPAAILTRAEKLGFRVRHGYGMTETLGVVVSCAWKKEWDKFPATERAR 351
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
KARQGVRT+ +TEVD+VDP TG+SVKRDG T GEIV RG +MLGYLKD + T +C+++
Sbjct: 352 FKARQGVRTVAMTEVDVVDPATGVSVKRDGVTSGEIVFRGACVMLGYLKDSDGTKRCIRN 411
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
YTGDVG+MH DGYLEIKDRSKDVIISGGEN+SS E+E+VLY HP VNE AVV RPD
Sbjct: 412 NWLYTGDVGVMHGDGYLEIKDRSKDVIISGGENLSSVEVEAVLYDHPAVNEVAVVARPDE 471
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
FW E PCAFV LK G + +EK+++++CR R+P +MVPKTVVF + LPKT+TGK+Q
Sbjct: 472 FWGETPCAFVMLKEGLVAP---PSEKEVVEFCRERLPHFMVPKTVVFKEALPKTSTGKIQ 528
Query: 541 KYVLGDIANSM 551
K+VL A +M
Sbjct: 529 KHVLRMDAQAM 539
>gi|15222924|ref|NP_177724.1| AMP-dependent synthetase and ligase family protein [Arabidopsis
thaliana]
gi|75311470|sp|Q9LQS1.1|AAE8_ARATH RecName: Full=Probable acyl-activating enzyme 8; AltName:
Full=AMP-binding protein 8; Short=AtAMPBP8
gi|6721108|gb|AAF26762.1|AC007396_11 T4O12.18 [Arabidopsis thaliana]
gi|17979422|gb|AAL49853.1| putative AMP-binding protein [Arabidopsis thaliana]
gi|23296913|gb|AAN13201.1| putative AMP-binding protein [Arabidopsis thaliana]
gi|332197660|gb|AEE35781.1| AMP-dependent synthetase and ligase family protein [Arabidopsis
thaliana]
Length = 544
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/553 (60%), Positives = 419/553 (75%), Gaps = 11/553 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSF 59
M+ LKP+ ANS PLT LGF+ERAAT DC SI+Y N T YTW +T RCL +AS+LSS
Sbjct: 1 MEDLKPSAANSLPLTLLGFLERAATVYGDCTSIVYGNSTVYTWRETNHRCLCVASALSSI 60
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
GI VVSV++ N P MYEL F+VPMSGAI N INTRLDART+S++L+H ESKL+FVD
Sbjct: 61 GIGRSDVVSVLSANTPEMYELQFSVPMSGAILNNINTRLDARTVSVLLRHCESKLLFVDF 120
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
S L +E +++ P LVLI +++E + R + F Y +++ +G+P
Sbjct: 121 FYSDLAVEAITML---LNPPILVLIANEEEEEGGAEVTER---SKFCYLYSDLITRGNPD 174
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W+RP S+ DP+V+NYT GTTS+PKGVV C++ F++ +DSL DW VPK V LWTLP+
Sbjct: 175 FKWIRPGSEWDPIVVNYTSGTTSSPKGVVHCHRGIFVMTLDSLTDWAVPKTPVYLWTLPI 234
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW++ WG A VG TNVC+RK AP+++ LIR HGVTHM GAPIVL +LS+S E+ Q
Sbjct: 235 FHANGWTYPWGIAAVGGTNVCVRKLHAPSIYHLIRDHGVTHMYGAPIVLQILSASQESDQ 294
Query: 300 -LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
L PV LTAGS PPA VLLR ESLGFIVSHGYG TE AGV VSCAWKP WN+LPA ++
Sbjct: 295 PLKSPVNFLTAGSSPPATVLLRAESLGFIVSHGYGLTETAGVIVSCAWKPNWNRLPASDQ 354
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A LK+RQGVRT+G +E+D+VDPE+G SV+RDG+T GEIV+RG S+MLGYLK+P T
Sbjct: 355 AQLKSRQGVRTVGFSEIDVVDPESGRSVERDGETVGEIVLRGSSIMLGYLKNPIGTQNSF 414
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
K+G ++TGD+G++H DGYLEIKDRSKDVIISGGEN+SS E+E+VLY++P VNEAAVV RP
Sbjct: 415 KNGWFFTGDLGVIHGDGYLEIKDRSKDVIISGGENVSSVEVEAVLYTNPAVNEAAVVARP 474
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
D FW E PCAFVSLK G T+K+II+YC+ ++PRYM PKTV F++ELPKT+TGK
Sbjct: 475 DEFWGETPCAFVSLKPGLTR---KPTDKEIIEYCKYKMPRYMAPKTVSFLEELPKTSTGK 531
Query: 539 VQKYVLGDIANSM 551
+ K +L +IA +M
Sbjct: 532 IIKSLLKEIAKNM 544
>gi|30687400|ref|NP_173572.2| pMF8-like amp-binding protein [Arabidopsis thaliana]
gi|20799729|gb|AAM28627.1|AF503769_1 adenosine monophosphate binding protein 10 AMPBP10 [Arabidopsis
thaliana]
gi|332191992|gb|AEE30113.1| pMF8-like amp-binding protein [Arabidopsis thaliana]
Length = 547
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/557 (58%), Positives = 428/557 (76%), Gaps = 15/557 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSL--S 57
M+ L P+P+NS PLT LGF++RAA+ DCPSI++ +T +TWS+T+ RCL++AS+L S
Sbjct: 1 MELLLPHPSNSTPLTVLGFLDRAASVYGDCPSILHTANTVHTWSETHNRCLRIASALTSS 60
Query: 58 SFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFV 117
S GI G VVSV+ PN+P++YEL FAVPMSGAI N IN RLDA +S++L+HSES+LVFV
Sbjct: 61 SIGIKQGQVVSVVGPNVPSVYELQFAVPMSGAILNNINPRLDAHALSVLLRHSESRLVFV 120
Query: 118 DHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD 177
DH S SL+LE VSLF H K P LVL+ DD+E SSS+ +DF+DTYE ++ +G+
Sbjct: 121 DHRSISLVLEAVSLFTQHEK-PHLVLLDDDQENDSSSA-------SDFLDTYEEIMERGN 172
Query: 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
+F W+RP+++ PMVLNYT GTTS+PKGVV ++A F++ V SL+DW VP + V LWTL
Sbjct: 173 SRFKWIRPQTEWQPMVLNYTSGTTSSPKGVVLSHRAIFMLTVSSLLDWSVPNRPVYLWTL 232
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
PMFH NGW +TWG A VGATN+C R+ DAPT++ LI KH VTHMC AP+VLN+L + P +
Sbjct: 233 PMFHANGWGYTWGTAAVGATNICTRRVDAPTIYNLIDKHNVTHMCAAPMVLNMLINYPLS 292
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
L PV +T+G+PPPA ++ R ESLGF VSH YG TE +G VSCAWKPKW+ L E
Sbjct: 293 TPLKNPV--MTSGAPPPATIISRAESLGFNVSHSYGLTETSGPVVSCAWKPKWDHLDPLE 350
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
RA LK+RQGVRT+G TEVD+ D +TG SVK DG + GEIV RG S+MLGY KDP+ T+ C
Sbjct: 351 RARLKSRQGVRTLGFTEVDVRDRKTGKSVKHDGVSVGEIVFRGSSVMLGYYKDPQGTAAC 410
Query: 418 MK-DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
M+ DG +Y+GD+G++H DGYLEIKDRSKDVII GGENISS EIE+VLY++P+V EAAVV
Sbjct: 411 MREDGWFYSGDIGVIHKDGYLEIKDRSKDVIICGGENISSAEIETVLYTNPVVKEAAVVA 470
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMM-TTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
+PD W E PCAFVSLK + G + TE++I ++C+ ++P+YMVP+ V+F +ELPKT+
Sbjct: 471 KPDKMWGETPCAFVSLKCDNNGDGSVPVTEREIREFCKTKLPKYMVPRKVIFQEELPKTS 530
Query: 536 TGKVQKYVLGDIANSMS 552
TGK+QK++L +A ++S
Sbjct: 531 TGKIQKFLLRQMAKTLS 547
>gi|357491645|ref|XP_003616110.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
gi|355517445|gb|AES99068.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
Length = 563
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/556 (60%), Positives = 423/556 (76%), Gaps = 13/556 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD+L N ANS LTPL F+ERAAT + SIIYN+T++TWSQT++RCLQLASSLSS G
Sbjct: 1 MDQLTRNQANSTALTPLTFLERAATVYGNSISIIYNNTSFTWSQTHKRCLQLASSLSSLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G VVSV++PN PAMYELHF+VPMSGAI N +N RLD +++S++L HSESKL+FVD L
Sbjct: 61 IQKGDVVSVLSPNTPAMYELHFSVPMSGAILNNLNFRLDHKSLSVLLIHSESKLIFVDIL 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPP----ADFVDTYENMLAKG 176
S SL L +SLFP + + PKLVLI D+ + P +IPP + ++TYE ++ KG
Sbjct: 121 SLSLTLNALSLFPTNIQQPKLVLIMDE------TLAPNQIPPLPKNVNIINTYEGLVTKG 174
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
DP F W++P S+ DP+ LNYT GTTS+PKGVV C++A FI+++DSL+DW VP Q V LWT
Sbjct: 175 DPNFKWIQPNSEWDPITLNYTSGTTSSPKGVVHCHRATFIVSLDSLVDWSVPVQPVFLWT 234
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
LPMFH+NGWS+ W A VG N+C R+ DAPT++ LI HGVTHMC AP+VLN+LSS +
Sbjct: 235 LPMFHSNGWSYPWAMAAVGGINICARRIDAPTIYRLIESHGVTHMCAAPVVLNMLSSFNK 294
Query: 297 AKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
+ L +PV +LT GS PPA +L R E LGF VSHGYG TE GV VSCAWK +W++ PA
Sbjct: 295 TEPLKKPVHVLTGGSSPPATILCRAELLGFEVSHGYGMTETCGVIVSCAWKREWDRFPAT 354
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
ERA +KARQGVR +G+ EVD+V P TG SVK DG T GEIV++G +MLGYLKD AT +
Sbjct: 355 ERARMKARQGVRRVGVAEVDVVGP-TGESVKNDGVTVGEIVVKGACVMLGYLKDEYATWQ 413
Query: 417 CM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
CM KDG +YTGDVG++H +GY+EIKDR+KDVIISGGEN+SS E+E+VLY HP V EAAVV
Sbjct: 414 CMRKDGWFYTGDVGVIHKNGYMEIKDRTKDVIISGGENMSSVEVEAVLYMHPAVKEAAVV 473
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
RPD FW E PCAFVSL + TEK++ ++CR ++P +MVPKTVVF +ELPKT+
Sbjct: 474 ARPDEFWGETPCAFVSLNDELKEEE-IPTEKEVKEFCREKLPHFMVPKTVVFKEELPKTS 532
Query: 536 TGKVQKYVLGDIANSM 551
TGK+QK+VL +A +M
Sbjct: 533 TGKIQKHVLRRVARAM 548
>gi|15223865|ref|NP_177848.1| putative AMP-binding protein [Arabidopsis thaliana]
gi|75278861|sp|O80658.1|AAE4_ARATH RecName: Full=Probable acyl-activating enzyme 4; AltName:
Full=AMP-binding protein 4; Short=AtAMPBP4
gi|3540196|gb|AAC34346.1| Putative amp-binding protein [Arabidopsis thaliana]
gi|332197832|gb|AEE35953.1| putative AMP-binding protein [Arabidopsis thaliana]
Length = 545
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/554 (58%), Positives = 422/554 (76%), Gaps = 13/554 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSS-- 58
M+ L P+ +NSCPLT LGF+ERAA+ D PS+++ T +TWS+T+ RCL++AS+LSS
Sbjct: 1 MELLLPHASNSCPLTVLGFLERAASVFGDSPSLLHTTTVHTWSETHSRCLRIASTLSSAS 60
Query: 59 FGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD 118
GIN G VVSVI PN+P++YEL FAVPMSGA+ N IN RLDA +S++L+HSESKLVFVD
Sbjct: 61 LGINRGQVVSVIGPNVPSVYELQFAVPMSGAVLNNINPRLDAHALSVLLRHSESKLVFVD 120
Query: 119 HLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP 178
H SSSL+LE VS F P + P+LV++ D ++ SSSS DF+DTYE + +GD
Sbjct: 121 HHSSSLVLEAVS-FLPKDERPRLVILNDGNDMPSSSSAD-----MDFLDTYEGFMERGDL 174
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
+F WVRPKS+ PMVLNYT GTTS+PKGVV +++ F+ ++SL+DW +P + V LWTLP
Sbjct: 175 RFKWVRPKSEWTPMVLNYTSGTTSSPKGVVHSHRSVFMSTINSLLDWSLPNRPVYLWTLP 234
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK 298
MFH NGWS+TW A VGA N+C+ + D PT+F LI K+ VTHMC AP+VLN+L++ P K
Sbjct: 235 MFHANGWSYTWATAAVGARNICVTRVDVPTIFNLIDKYQVTHMCAAPMVLNMLTNHPAQK 294
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
L PV+++TAG+PPPA V+ + E+LGF VSHGYG TE G+ VSCA KP+W++L ER
Sbjct: 295 PLQSPVKVMTAGAPPPATVISKAEALGFDVSHGYGMTETGGLVVSCALKPEWDRLEPDER 354
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A K+RQG+RT EVD+ DP +G SVK DG T GEIV RGGS+MLGY KDPE T+ M
Sbjct: 355 AKQKSRQGIRTAVFAEVDVRDPISGKSVKHDGATVGEIVFRGGSVMLGYYKDPEGTAASM 414
Query: 419 K-DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
+ DG +YTGD+G+MHPDGYLE+KDRSKDV+I GGENISSTE+E+VLY++P + EAAVV +
Sbjct: 415 REDGWFYTGDIGVMHPDGYLEVKDRSKDVVICGGENISSTELEAVLYTNPAIKEAAVVAK 474
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD W E PCAFVSLK S TE++I ++C+ ++P+YMVP+ VVF++ELPKT+TG
Sbjct: 475 PDKMWGETPCAFVSLKYHDGS----VTEREIREFCKTKLPKYMVPRNVVFLEELPKTSTG 530
Query: 538 KVQKYVLGDIANSM 551
K+QK++L +A S+
Sbjct: 531 KIQKFLLRQMAKSL 544
>gi|20799725|gb|AAM28625.1|AF503767_1 adenosine monophosphate binding protein 8 AMPBP8 [Arabidopsis
thaliana]
Length = 542
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/549 (59%), Positives = 416/549 (75%), Gaps = 11/549 (2%)
Query: 5 KPNPANSCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINP 63
+P+ ANS PLT LGF+ERAAT DC SI+Y N T YTW +T RCL +AS+LSS GI
Sbjct: 3 EPSAANSLPLTLLGFLERAATVYGDCTSIVYGNSTVYTWRETNHRCLCVASALSSIGIGR 62
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
VVSV++ N P MYEL F+VPMSGAI N INTRLDART+S++L+H ESKL+FVD S
Sbjct: 63 SDVVSVLSANTPEMYELQFSVPMSGAILNNINTRLDARTVSVLLRHCESKLLFVDFFYSD 122
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L +E +++ P LVLI +++E + R + F Y +++ +G+P F W+
Sbjct: 123 LAVEAITML---LNPPILVLIANEEEEEGGAEVTER---SKFCYLYSDLITRGNPDFKWI 176
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
RP S+ DP+V+NYT GTTS+PKGVV C++ F++ +DSL DW VPK V LWTLP+FH N
Sbjct: 177 RPGSEWDPIVVNYTSGTTSSPKGVVHCHRGIFVMTLDSLTDWAVPKTPVYLWTLPIFHAN 236
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-LDR 302
GW++ WG A VG TNVC+RK AP+++ LIR HGVTHM GAPIVL +LS+S E+ Q L
Sbjct: 237 GWTYPWGIAAVGGTNVCVRKLHAPSIYHLIRDHGVTHMYGAPIVLQILSASQESDQPLKS 296
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
PV LTAGS PPA VLLR ESLGFIVSHGYG TE AGV VSCAWKP WN+LPA ++A LK
Sbjct: 297 PVNFLTAGSSPPATVLLRAESLGFIVSHGYGLTETAGVIVSCAWKPNWNRLPASDQAQLK 356
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
+RQGVRT+G +E+D+VDPE+G SV+RDG+T GEIV+RG S+MLGYLK+P T K+G
Sbjct: 357 SRQGVRTVGFSEIDVVDPESGRSVERDGETVGEIVLRGSSIMLGYLKNPIGTQNSFKNGW 416
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
++TGD+G++H DGYLEIKDRSKDVIISGGEN+SS E+E+VLY++P VNEAAVV RPD FW
Sbjct: 417 FFTGDLGVIHGDGYLEIKDRSKDVIISGGENVSSVEVEAVLYTNPAVNEAAVVARPDEFW 476
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E PCAFVSLK G T+K+II+YC+ ++PRYM PKTV F++ELPKT+TGK+ K
Sbjct: 477 GETPCAFVSLKPGLTR---KPTDKEIIEYCKYKMPRYMAPKTVSFLEELPKTSTGKIIKS 533
Query: 543 VLGDIANSM 551
+L +IA +M
Sbjct: 534 LLKEIAKNM 542
>gi|15219014|ref|NP_173573.1| putative AMP-binding protein [Arabidopsis thaliana]
gi|75311430|sp|Q9LPK6.1|AEE9_ARATH RecName: Full=Probable acyl-activating enzyme 9; AltName:
Full=AMP-binding protein 9; Short=AtAMPBP9
gi|9454577|gb|AAF87900.1|AC015447_10 Putative amp-binding protein [Arabidopsis thaliana]
gi|20799727|gb|AAM28626.1|AF503768_1 adenosine monophosphate binding protein 9 AMPBP9 [Arabidopsis
thaliana]
gi|18176404|gb|AAL60038.1| putative AMP-binding protein [Arabidopsis thaliana]
gi|22136898|gb|AAM91793.1| putative amp-binding protein [Arabidopsis thaliana]
gi|332191994|gb|AEE30115.1| putative AMP-binding protein [Arabidopsis thaliana]
Length = 550
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/555 (58%), Positives = 427/555 (76%), Gaps = 10/555 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSL--S 57
M+ L P+P+NS PLT LGF++RAA+ DCPSI++ +T +TWS+T+ RCL++AS+L S
Sbjct: 1 MELLLPHPSNSTPLTVLGFLDRAASVYGDCPSILHTTNTVHTWSETHNRCLRIASALTSS 60
Query: 58 SFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFV 117
S GIN G VVSV+ PN+P++YEL FAVPMSGAI N IN RLDA +S++L+HSESKLVFV
Sbjct: 61 SLGINRGQVVSVVGPNVPSVYELQFAVPMSGAILNNINPRLDAHALSVLLRHSESKLVFV 120
Query: 118 DHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD 177
D S S++LE VS F ++ P LVL+ DD+E S S +DF+DTY+ ++ +GD
Sbjct: 121 DPNSISVVLEAVS-FMRQNEKPHLVLLDDDQEDGSLSPSAA----SDFLDTYQGVMERGD 175
Query: 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
+F W+RP+++ PM+LNYT GTTS+PKGVV ++A F++ V SL+DW P + V LWTL
Sbjct: 176 SRFKWIRPQTEWQPMILNYTSGTTSSPKGVVLSHRAIFMLTVSSLLDWHFPNRPVYLWTL 235
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
PMFH NGW +TWG A VGATNVC R+ DAPT++ LI KH VTHMC AP+VLN+L++ P
Sbjct: 236 PMFHANGWGYTWGTAAVGATNVCTRRVDAPTIYDLIDKHHVTHMCAAPMVLNMLTNYPSR 295
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
K L PV+++TAG+PPPA ++ R E+LGF V HGYG TE G VSCAWK +W+ L E
Sbjct: 296 KPLKNPVQVMTAGAPPPAAIISRAETLGFNVGHGYGLTETGGPVVSCAWKAEWDHLDPLE 355
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
RA LK+RQGVRTIG EVD+ DP TG SV+ DG + GEIV++GGS+MLGY KDPE T+ C
Sbjct: 356 RARLKSRQGVRTIGFAEVDVRDPRTGKSVEHDGVSVGEIVLKGGSVMLGYYKDPEGTAAC 415
Query: 418 MK-DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
M+ DG +Y+GDVG++H DGYLE+KDRSKDVII GGENISS E+E+VLY++P+V EAAVV
Sbjct: 416 MREDGWFYSGDVGVIHEDGYLEVKDRSKDVIICGGENISSAEVETVLYTNPVVKEAAVVA 475
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
+PD W E PCAFVSLK ++ G++ TE++I ++C+ R+P+YMVP+ V+F +ELPKT+T
Sbjct: 476 KPDKMWGETPCAFVSLKYDSNGNGLV-TEREIREFCKTRLPKYMVPRKVIFQEELPKTST 534
Query: 537 GKVQKYVLGDIANSM 551
GK+QK++L +A S+
Sbjct: 535 GKIQKFLLRQMAKSL 549
>gi|20799717|gb|AAM28621.1|AF503763_1 adenosine monophosphate binding protein 4 AMPBP4 [Arabidopsis
thaliana]
Length = 545
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/554 (57%), Positives = 421/554 (75%), Gaps = 13/554 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSS-- 58
M+ L P+ +NSCPLT LGF+ERAA+ D PS+++ T +TWS+T+ RCL++AS+LSS
Sbjct: 1 MELLLPHASNSCPLTVLGFLERAASVFGDSPSLLHTTTVHTWSETHSRCLRIASTLSSAS 60
Query: 59 FGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD 118
GIN G VVSVI PN+P++YEL FAVPMSGA+ N IN RLDA +S++L+HSESKLVFVD
Sbjct: 61 LGINRGQVVSVIGPNVPSVYELQFAVPMSGAVLNNINPRLDAHALSVLLRHSESKLVFVD 120
Query: 119 HLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP 178
H SSL+LE VS F P + P+LV++ D ++ SSSS DF+DTYE + +GD
Sbjct: 121 HHLSSLVLEAVS-FLPKDERPRLVILNDGNDMPSSSSAD-----MDFLDTYEGFMERGDL 174
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
+F WVRPKS+ PMVLNYT GTTS+PKGVV +++ F+ ++SL+DW +P + V LWTLP
Sbjct: 175 RFKWVRPKSEWTPMVLNYTSGTTSSPKGVVHSHRSVFMSTINSLLDWSLPNRPVYLWTLP 234
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK 298
MFH NGWS+TW A VGA N+C+ + D PT+F LI K+ VTHMC AP+VLN+L++ P K
Sbjct: 235 MFHANGWSYTWATAAVGARNICVTRVDVPTIFNLIDKYQVTHMCAAPMVLNMLTNHPAQK 294
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
L PV+++TAG+PPPA V+ + E+LGF VSHGYG TE G+ VSCA KP+W++L ER
Sbjct: 295 PLQSPVKVMTAGAPPPATVISKAEALGFDVSHGYGMTETGGLVVSCALKPEWDRLEPDER 354
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A K+RQG+RT EVD+ DP +G SVK DG T GEIV RGGS+MLGY KDPE T+ M
Sbjct: 355 AKQKSRQGIRTAVFAEVDVRDPISGKSVKHDGATVGEIVFRGGSVMLGYYKDPEGTAASM 414
Query: 419 K-DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
+ DG +YTGD+G+MHPDGYLE+KDRSKDV+I GGENISSTE+E+VLY++P + EAAVV +
Sbjct: 415 REDGWFYTGDIGVMHPDGYLEVKDRSKDVVICGGENISSTELEAVLYTNPAIKEAAVVAK 474
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD W E PCAFVSLK S TE++I ++C+ ++P+YMVP+ VVF++ELPKT+TG
Sbjct: 475 PDKMWGETPCAFVSLKYHDGS----VTEREIREFCKTKLPKYMVPRNVVFLEELPKTSTG 530
Query: 538 KVQKYVLGDIANSM 551
K+QK++L +A S+
Sbjct: 531 KIQKFLLRQMAKSL 544
>gi|297850586|ref|XP_002893174.1| hypothetical protein ARALYDRAFT_889616 [Arabidopsis lyrata subsp.
lyrata]
gi|297339016|gb|EFH69433.1| hypothetical protein ARALYDRAFT_889616 [Arabidopsis lyrata subsp.
lyrata]
Length = 550
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/555 (58%), Positives = 426/555 (76%), Gaps = 10/555 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSL--S 57
M+ L P+P+NS PLT LGF++RAA+ DCPSI++ +T +TWS+T+ RCL++AS+L S
Sbjct: 1 MELLLPHPSNSTPLTVLGFLDRAASVYGDCPSILHATNTVHTWSETHNRCLRIASALTSS 60
Query: 58 SFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFV 117
S GIN G V+SV+ PN+P++YEL FAVPMSGAI N IN RLDA +S++L+HSESKLVFV
Sbjct: 61 SLGINQGQVISVVGPNVPSVYELQFAVPMSGAILNNINPRLDAHALSVLLRHSESKLVFV 120
Query: 118 DHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD 177
D S SL+LE VS H K P LVL+ DD+E SSS+ +DF+DTY+ ++ +GD
Sbjct: 121 DPNSISLVLEAVSFLGQHEK-PHLVLLEDDQEDGSSSA----SAASDFLDTYQGIMERGD 175
Query: 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
+F W+RP+++ PM+LNYT GTTS+PKGVV ++A F++ V SL+DW P + V LWTL
Sbjct: 176 SRFKWIRPQTEWQPMILNYTSGTTSSPKGVVLSHRAIFMLTVSSLLDWHFPNRPVYLWTL 235
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
PMFH NGW +TWG A VGATNVC R+ DAPT++ LI KH VTHMC AP+VLN+L++ P
Sbjct: 236 PMFHANGWGYTWGTAAVGATNVCTRRVDAPTIYDLIDKHHVTHMCAAPMVLNMLTNYPSR 295
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
K L PV+++TAG+PPPA ++ R ESLGF V HGYG TE G VSCAWK +W+ L E
Sbjct: 296 KPLKNPVQVMTAGAPPPAAIISRAESLGFNVGHGYGLTETGGPVVSCAWKAEWDHLDPLE 355
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
RA LK+RQGVRTIG +VD+ DP TG SV+ DG + GEIV++GGS+MLGY KDPE T+ C
Sbjct: 356 RARLKSRQGVRTIGFADVDVRDPRTGKSVEHDGVSVGEIVLKGGSVMLGYYKDPEGTAAC 415
Query: 418 MK-DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
M+ DG +Y+GDVG++H DGYLE+KDRSKDVII GGENISS E+E+VLY++P+V EAAVV
Sbjct: 416 MREDGWFYSGDVGVIHEDGYLEVKDRSKDVIICGGENISSAEVETVLYTNPVVKEAAVVA 475
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
+PD W E PCAFVSLK + G + TE++I ++C+ ++P+YMVP+ V+F +ELPKT+T
Sbjct: 476 KPDKMWGETPCAFVSLKYDNNGNGSV-TEREIREFCKTKLPKYMVPRKVIFQEELPKTST 534
Query: 537 GKVQKYVLGDIANSM 551
GK+QK++L +A S+
Sbjct: 535 GKIQKFLLRQMAKSL 549
>gi|356551974|ref|XP_003544347.1| PREDICTED: 2-succinylbenzoate--CoA ligase-like [Glycine max]
Length = 551
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/551 (60%), Positives = 414/551 (75%), Gaps = 14/551 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ L PNPANS PLTPL F+ERAA D SI+Y+ T++TWSQT+RRCLQLASSL+S G
Sbjct: 1 MEDLTPNPANSPPLTPLTFLERAAIVYGDSHSILYDRTSFTWSQTHRRCLQLASSLTSLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ GHV+SV++PN +MYELHFA+PM GAI N +N RL+ T+S++L+HSESKLVFV
Sbjct: 61 LGRGHVISVLSPNTTSMYELHFAIPMCGAILNNLNLRLNPHTLSVLLRHSESKLVFVHSH 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S SL+L +S FP + P LVLITDD + + S +DTYE+++ KG+P F
Sbjct: 121 SLSLILLALSNFPITTPRPSLVLITDDADAITRSP---------VIDTYEDLIRKGNPNF 171
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
WV+P S+ DP+ LNYT GTTS+PKGVVQ ++A FI+ +DSLIDW VPKQ V LWTLPMF
Sbjct: 172 KWVQPNSEWDPITLNYTSGTTSSPKGVVQSHRATFIMTLDSLIDWCVPKQPVYLWTLPMF 231
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H+NGW+F WG A G TN+C RK DAPT++ LI H VTHMC AP+VLN+L + E +
Sbjct: 232 HSNGWTFPWGIAAAGGTNICARKIDAPTIYRLIESHNVTHMCAAPVVLNMLLTRTEP--V 289
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
PV +LT GSPPPA +L R E LGF VSHGYG TE GV VSCAWK +W+K P+ ERA
Sbjct: 290 KNPVHVLTGGSPPPAAILTRAEELGFRVSHGYGMTETLGVVVSCAWKKEWDKFPSTERAR 349
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
KARQGVRT+ +TEVD+VDP TG+SVKRDG T GEIV RG +MLGYLKD E T +C+++
Sbjct: 350 FKARQGVRTVAMTEVDVVDPTTGISVKRDGVTPGEIVFRGSCVMLGYLKDIEGTKRCIRN 409
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
YTGDVG+MH DGYLEIKDRSKDVIISGGEN+SS E+ESVLY HP VNE AVV RPD
Sbjct: 410 NWLYTGDVGVMHGDGYLEIKDRSKDVIISGGENLSSVEVESVLYGHPAVNEVAVVARPDE 469
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
FW E PCAFV LK G + +EK+++++CR R+P +MVPKTVVF + LPKT+TGK+Q
Sbjct: 470 FWGETPCAFVMLKEGLVAP---PSEKELVEFCRERLPHFMVPKTVVFKEALPKTSTGKIQ 526
Query: 541 KYVLGDIANSM 551
K+VL A +M
Sbjct: 527 KHVLRMNAKAM 537
>gi|357491641|ref|XP_003616108.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
gi|355517443|gb|AES99066.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
Length = 563
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/556 (59%), Positives = 419/556 (75%), Gaps = 13/556 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M++L N ANS LTPL F+ERAAT + SIIYN+T++TWSQT++RCLQLASSLSS G
Sbjct: 1 MNQLTRNQANSTALTPLTFLERAATVYGNSISIIYNNTSFTWSQTHKRCLQLASSLSSLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G VVSV++PN PAMYELHF+VPMSGAI N +N RLD +T+S++L HSESKL+FVD L
Sbjct: 61 IQKGDVVSVLSPNTPAMYELHFSVPMSGAILNNLNFRLDHKTLSVLLIHSESKLIFVDIL 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPP----ADFVDTYENMLAKG 176
S SL L +SLFP + + PKLVLI D+ + P +IPP + ++TYE ++AKG
Sbjct: 121 SLSLTLNALSLFPTNIQQPKLVLIMDE------TLAPHQIPPLPKNVNIINTYEGLVAKG 174
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
DP F W+RP S+ DP+ LNYT GTTS+PKGVV C++A FI+++DSLIDW VP Q V LWT
Sbjct: 175 DPYFKWIRPDSEWDPITLNYTSGTTSSPKGVVHCHRATFIVSLDSLIDWSVPVQPVFLWT 234
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
LPMFH+NGWS+ W A VG N+C R+ DAPT++ LI HGVTHMC AP+VLN+LS+ +
Sbjct: 235 LPMFHSNGWSYPWAMAAVGGINICTRRTDAPTIYTLIESHGVTHMCAAPVVLNMLSNFNK 294
Query: 297 AKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
+ L +PV +LT GS PP +L R E LGF VSHG+G TE+ GV VSCAWK +W++ PA
Sbjct: 295 TEPLKKPVHVLTGGSSPPTAILTRAERLGFEVSHGFGMTEVIGVIVSCAWKREWDRFPAT 354
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
E+A +KARQGVR +G+ EVD+V P TG SVK DG T GEIV++G +MLGY KD ATS+
Sbjct: 355 EKARMKARQGVRKVGVAEVDVVGP-TGESVKNDGVTVGEIVVKGACVMLGYFKDEIATSQ 413
Query: 417 CM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
C+ K+G +YTGDV +MH DGYLEIKDRSKD+IISGGEN+SS E+E VLY H V EAAVV
Sbjct: 414 CIKKNGWFYTGDVAVMHEDGYLEIKDRSKDLIISGGENMSSVEVEGVLYMHSAVKEAAVV 473
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
RPD FW E PC FVSLK + T+ +I ++C+ ++P +M+PKT+VF+ ELPKT+
Sbjct: 474 ARPDDFWGETPCGFVSLKDELKKND-IPTDNEIKEFCKEKLPHFMMPKTIVFMKELPKTS 532
Query: 536 TGKVQKYVLGDIANSM 551
TGKVQK+VL +A M
Sbjct: 533 TGKVQKHVLRKVAKKM 548
>gi|222629764|gb|EEE61896.1| hypothetical protein OsJ_16604 [Oryza sativa Japonica Group]
Length = 540
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/549 (59%), Positives = 398/549 (72%), Gaps = 36/549 (6%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSL-SSF 59
MD+L NPANSC LTPLGF+ERAAT DCPS++Y+DT +TWSQT+RRCL+LAS+L SS
Sbjct: 1 MDKLGANPANSCALTPLGFLERAATVFGDCPSVVYHDTVFTWSQTHRRCLRLASALVSSL 60
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
GI+ G VVSV+ PN+PAMYE+HFAVPMSGA+ N+INTRLDART+S++L+HS SKL+FVD
Sbjct: 61 GISRGDVVSVLLPNVPAMYEMHFAVPMSGAVLNSINTRLDARTVSVLLRHSGSKLIFVDP 120
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+L + + L P P++VL+ D E +P + TYE ++ KGDP+
Sbjct: 121 ALLPVLRDALRLLPAGHTAPRVVLVEDPHEKEFPPAPAAAL-------TYERLVEKGDPE 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F+WVRP S+ DPM+LNYT GTTSAPKGVV C++ F+I VDSL+DW VP + LWTLPM
Sbjct: 174 FAWVRPASEWDPMILNYTSGTTSAPKGVVHCHRGIFLITVDSLVDWAVPPRPTYLWTLPM 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA-- 297
FH NGWSF WG AVVG TNVCLR+ DA VF I + GV H+CGAP+VLN+L+++PE
Sbjct: 234 FHANGWSFPWGMAVVGGTNVCLRRVDAAEVFDTIARRGVNHLCGAPVVLNMLANAPEGVR 293
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
K L VRILTAG+PPPA VL RTE++GF VSHGYG TE AG+ +SCAWK +W+KLPA E
Sbjct: 294 KPLPGKVRILTAGAPPPAAVLYRTEAIGFEVSHGYGLTETAGLVLSCAWKGEWDKLPASE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
RA LKARQGVRT G+ EVD+VD ETG SV RDG T GEIV+RGG + LGYL D AT
Sbjct: 354 RARLKARQGVRTPGMAEVDVVDGETGRSVPRDGSTMGEIVLRGGCITLGYLNDEAATKAA 413
Query: 418 MKD-GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
++D G +YTGDVG+MHPDG E+ESVLY HP VNEAAVV
Sbjct: 414 IRDNGWFYTGDVGVMHPDG---------------------VEVESVLYGHPAVNEAAVVA 452
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
RPD FW E PCAFVSLK GG T D++ + R R+PRYMVPKTV+F DELPKT+T
Sbjct: 453 RPDEFWGETPCAFVSLK----QGGGAVTAADVVAWSRERMPRYMVPKTVIFRDELPKTST 508
Query: 537 GKVQKYVLG 545
GK++ G
Sbjct: 509 GKIRSTCSG 517
>gi|297842499|ref|XP_002889131.1| hypothetical protein ARALYDRAFT_476888 [Arabidopsis lyrata subsp.
lyrata]
gi|297334972|gb|EFH65390.1| hypothetical protein ARALYDRAFT_476888 [Arabidopsis lyrata subsp.
lyrata]
Length = 531
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/554 (55%), Positives = 411/554 (74%), Gaps = 27/554 (4%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSS-- 58
M+ L P+ +NSCPLT LGF+ERAA+ PS+++ T +TWS+T+ RCL++AS+LSS
Sbjct: 1 MELLLPHASNSCPLTVLGFLERAASVFGGSPSLLHTTTVHTWSETHSRCLRIASTLSSSS 60
Query: 59 FGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD 118
GIN G VVSVI PN+P++YEL FAVPMSGA+ N IN RLDA +S++L+HSESKL+FVD
Sbjct: 61 LGINRGQVVSVIGPNVPSVYELQFAVPMSGAVLNNINPRLDAHALSVLLRHSESKLMFVD 120
Query: 119 HLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP 178
H S SL+LE VS F P ++ P+L+++ D + SS+S DF+DTYE ++ +GDP
Sbjct: 121 HHSRSLVLEAVS-FLPKNERPRLIILNDRNDTPSSTSAD-----MDFLDTYEGVMERGDP 174
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
F WVRPKS+ PMVLNYT GTTS+PKGVV +++ F+ ++SL+DW +P V LWTLP
Sbjct: 175 CFKWVRPKSEWVPMVLNYTSGTTSSPKGVVHSHRSVFMSTINSLLDWSLPNCPVYLWTLP 234
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK 298
MFH NGWS+TW A VGATN+C+ + DAPT+F LI K+ VTHMC AP+VLN+L++ P K
Sbjct: 235 MFHANGWSYTWATAAVGATNICVTRVDAPTIFNLIDKYQVTHMCAAPMVLNMLTNYPGQK 294
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
L PV+++TAG+PPPA V+ + ++LGF V HGYG TE G+ VSCAWKP+W++L R
Sbjct: 295 PLQSPVKVMTAGAPPPATVISKAKALGFDVGHGYGMTETGGLVVSCAWKPEWDRLEPDAR 354
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A LK+RQG++T EVD+ DP +G VK DG T GEIV +GGS+MLGY KDPE T+ M
Sbjct: 355 AKLKSRQGIKTAVFAEVDVRDPLSGKGVKHDGATVGEIVFKGGSVMLGYYKDPEGTAASM 414
Query: 419 KDGR-YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
++ R +YTGD+G+MHPDGYLE+KDRSKDV+I GGENISS E+E+VLY++P + EAAVV +
Sbjct: 415 REDRWFYTGDIGVMHPDGYLEVKDRSKDVVICGGENISSMELEAVLYTNPAIKEAAVVAK 474
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD W E PCAF+ ++C+ ++P+YMVP+ VVF++ELPKT+TG
Sbjct: 475 PDKMWGETPCAFIR------------------EFCKTKLPKYMVPRNVVFLEELPKTSTG 516
Query: 538 KVQKYVLGDIANSM 551
K+QK++L IA S+
Sbjct: 517 KIQKFLLRQIAKSL 530
>gi|255569837|ref|XP_002525882.1| AMP dependent ligase, putative [Ricinus communis]
gi|223534796|gb|EEF36486.1| AMP dependent ligase, putative [Ricinus communis]
Length = 480
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 310/487 (63%), Positives = 375/487 (77%), Gaps = 21/487 (4%)
Query: 86 MSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLIT 145
MSGAI N +NTRLDART+SI+L+HSESKL+FVD LS +L+ E +SLFPP + P LVLI
Sbjct: 1 MSGAILNNLNTRLDARTVSILLRHSESKLLFVDVLSKALVSEALSLFPPDIRPPALVLIA 60
Query: 146 DD---KEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTS 202
DD +++SSS +FVDTYE ++ KGDP F WV P+++ DP+VLNYT GTTS
Sbjct: 61 DDVVSDPLNASSS-------VEFVDTYEGLMLKGDPHFKWVMPENEWDPLVLNYTSGTTS 113
Query: 203 APKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLR 262
APKGVV C++ FFI VDSLIDW VPKQ V LWTLPMFH+NGWS+ WG A VG N+CLR
Sbjct: 114 APKGVVHCHRGFFITTVDSLIDWSVPKQPVFLWTLPMFHSNGWSYPWGMAAVGGINICLR 173
Query: 263 KFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD-----RPVRILTAGSPPPAPV 317
KFDA T++ LI KH VTHMCGAP+VLN+L++ P + + +LTAG+PPPA +
Sbjct: 174 KFDASTIYRLIIKHEVTHMCGAPVVLNMLANFPIDNKTQNILKTNQIHVLTAGAPPPAAI 233
Query: 318 LLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDI 377
L R E+LGF VSHGYG TE G+ +SCAWK WN+ PA ERA LKARQGVRTIG+T++D+
Sbjct: 234 LTRAEALGFKVSHGYGLTESGGIVISCAWKQMWNRFPATERARLKARQGVRTIGVTKMDV 293
Query: 378 VDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM-KDGRYYTGDVGMMHPDGY 436
VDP TG SVKRDG ++GEIV+RGG +MLGYLKDP +TSKCM +G YTGDV +MHPDGY
Sbjct: 294 VDPVTGESVKRDGLSQGEIVLRGGCVMLGYLKDPVSTSKCMTSEGWLYTGDVAVMHPDGY 353
Query: 437 LEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGT 496
LEIKDRSKDVIISGGEN+SS E+ESVLY +P++NEAAVV RPD +W E PCAFVSL+
Sbjct: 354 LEIKDRSKDVIISGGENLSSVEVESVLYMNPIINEAAVVARPDEYWGETPCAFVSLRKSG 413
Query: 497 DSGGM----MTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMS 552
S G + EK+II+YCRAR+P YMVPKTVV DELPKT+TGK+QK VL D+A +M
Sbjct: 414 GSSGGDLSPVAMEKEIIEYCRARLPHYMVPKTVVVKDELPKTSTGKIQKSVLRDMAKAMG 473
Query: 553 MSH-SRM 558
S SRM
Sbjct: 474 SSRISRM 480
>gi|218195816|gb|EEC78243.1| hypothetical protein OsI_17900 [Oryza sativa Indica Group]
Length = 502
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 312/553 (56%), Positives = 376/553 (67%), Gaps = 67/553 (12%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSL-SSF 59
MD+L NPANSC LTPLGF+ERAAT DCPS++Y+DT +TWSQT+RRCL+LAS+L SS
Sbjct: 1 MDKLGANPANSCALTPLGFLERAATVFGDCPSVVYHDTVFTWSQTHRRCLRLASALVSSL 60
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
GI+ G VVSV+ PN+PAMYE+HFAVPMSGA+ N+INTRLDART+S++L+HS SKL+FVD
Sbjct: 61 GISRGDVVSVLLPNVPAMYEMHFAVPMSGAVLNSINTRLDARTVSVLLRHSGSKLIFVDP 120
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+L + + L P P++VL+ D E +P + TYE ++ KGDP+
Sbjct: 121 ALLPVLRDALRLLPAGHTAPRVVLVEDPHEKEFPPAPAAAL-------TYERLVEKGDPE 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F+WVRP S+ DPM+LNYT GTTSAPKGVV C++ F+I VDSL+DW VP + LWTLPM
Sbjct: 174 FAWVRPASEWDPMILNYTSGTTSAPKGVVHCHRGIFLITVDSLVDWAVPPRPTYLWTLPM 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGWSF WG AVVG TNVCLR+ DA HG
Sbjct: 234 FHANGWSFPWGMAVVGGTNVCLRRVDAAEAIGFEVSHGYG-------------------- 273
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
TE+ G + +SCAWK +W+KLPA ERA
Sbjct: 274 --------------------LTETAGLV--------------LSCAWKGEWDKLPASERA 299
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKARQGVRT G+ EVD+VD ETG SV RDG T GEIV+RGG + LGYL D AT ++
Sbjct: 300 RLKARQGVRTPGMAEVDVVDGETGRSVPRDGSTMGEIVLRGGCITLGYLNDEAATKAAIR 359
Query: 420 D-GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
D G +YTGDVG+MHPDGY+EI+DRSKDVIISGGENISS E+ESVLY HP VNEAAVV RP
Sbjct: 360 DNGWFYTGDVGVMHPDGYVEIRDRSKDVIISGGENISSVEVESVLYGHPAVNEAAVVARP 419
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
D FW E PCAFVSLK GG T D++ + R R+PRYMVPKTV+F DELPKT+TGK
Sbjct: 420 DEFWGETPCAFVSLK----QGGGAVTAADVVAWSRERMPRYMVPKTVIFRDELPKTSTGK 475
Query: 539 VQKYVLGDIANSM 551
+QKYVL +IA M
Sbjct: 476 IQKYVLRNIAKEM 488
>gi|296083811|emb|CBI24028.3| unnamed protein product [Vitis vinifera]
Length = 449
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 304/560 (54%), Positives = 371/560 (66%), Gaps = 113/560 (20%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD LKP PANS PLTPLGF++RAAT DCPS++YN TYTWSQT+RRCLQ+ASS+ SFG
Sbjct: 1 MDSLKPRPANSSPLTPLGFLDRAATVYGDCPSVLYNSITYTWSQTHRRCLQVASSIKSFG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I GHVVSV+APN+PAMYELHFAVPMSGA+ NTINTRLDART+S++L+HSESKLVFVD L
Sbjct: 61 IGRGHVVSVVAPNVPAMYELHFAVPMSGAVLNTINTRLDARTVSVLLRHSESKLVFVDCL 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S +L+LE +SLFPP+++ P L
Sbjct: 121 SRALILEALSLFPPNTQWPLL--------------------------------------- 141
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
W DP++LNYT GTTS+PKGVV C++ FI+ +DSL++W VPKQ V LWTLPMF
Sbjct: 142 -W-------DPIILNYTSGTTSSPKGVVHCHRGIFIVTIDSLVEWSVPKQPVYLWTLPMF 193
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGW+FTWG A +G T++C ++
Sbjct: 194 HGNGWTFTWGMAAIGG----------------------TNVC--------------LRKF 217
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
D RI+ P YG T + V P+W++ PA ERA
Sbjct: 218 D--ARIIYDAIP------------------KYGITHMCAAPV-----PQWDRFPASERAR 252
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM-K 419
+KARQGVRT+ +TEVD+VDP++G+SVKRDG + GEIV+RG +MLGYLKDPE TSKCM K
Sbjct: 253 VKARQGVRTVVMTEVDVVDPKSGVSVKRDGSSLGEIVLRGACIMLGYLKDPEGTSKCMSK 312
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
+G YTGDV +MHPDGY+EIKDRSKDVIISGGEN+SS E+ESVLY+HP VNEAAVV RPD
Sbjct: 313 EGWLYTGDVAVMHPDGYIEIKDRSKDVIISGGENLSSVEVESVLYTHPAVNEAAVVARPD 372
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
FW E PCAFVSLK + T K++++YCRAR+P YMVPKTVVF +ELPKT+TGK+
Sbjct: 373 DFWGETPCAFVSLKPESPDK---PTAKEMMEYCRARMPHYMVPKTVVFKEELPKTSTGKI 429
Query: 540 QKYVLGDIANSMSMS-HSRM 558
QK+ L DIA +M S SRM
Sbjct: 430 QKFKLRDIAKAMGCSPASRM 449
>gi|225466273|ref|XP_002272437.1| PREDICTED: medium-chain-fatty-acid--CoA ligase [Vitis vinifera]
Length = 588
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 284/566 (50%), Positives = 375/566 (66%), Gaps = 23/566 (4%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MDRL + AN LTP+ F+ RAA A S+IY T +TW QTY RC +LASSL
Sbjct: 1 MDRLPKSAANYTALTPINFLTRAAVAYARKTSLIYESTRFTWQQTYERCCRLASSLHRLN 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ VVSV+APNIPAMYE+HFAVPM GA+ NTIN RLDA I+ IL HSE+K+ FVD+
Sbjct: 61 VAKNDVVSVLAPNIPAMYEMHFAVPMCGAVLNTINIRLDAHNIATILGHSEAKVFFVDYQ 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT----------YE 170
+ P ++ L+L+ KE + S P + D +DT YE
Sbjct: 121 -----------YVPLAREALLLLMAQHKEKLVAESSIPLVIVIDDIDTPTGVRLGELEYE 169
Query: 171 NMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQ 230
++A G+P ++ V + + DP+ LNYT GTTSAPKGVV ++ ++ + L+ W + +
Sbjct: 170 QLVANGNPGYAPVEVEDEWDPIALNYTSGTTSAPKGVVYSHRGAYLSTLSLLLGWEMGGE 229
Query: 231 SVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNL 290
V +W+LPMFH NGW+FTWG A G T+VC+R A ++ I H VTHMC APIV N+
Sbjct: 230 PVYMWSLPMFHCNGWTFTWGVAARGGTSVCIRNTTAYDMYRNIALHNVTHMCCAPIVFNI 289
Query: 291 L--SSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKP 348
L + E ++L PV+ILT G+PPPAP+L + E+LGF V H YG TE G + C W+
Sbjct: 290 LLEAKENERQRLKTPVQILTGGAPPPAPLLEKIEALGFHVVHAYGLTEATGPALVCEWQA 349
Query: 349 KWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYL 408
+WN+LP +A LKARQG+ + L +VD+ +P+T SV RDG++ GEIV+RG S+M GY
Sbjct: 350 EWNRLPRDHQAKLKARQGISILTLADVDVKNPDTMASVPRDGKSMGEIVLRGSSIMKGYF 409
Query: 409 KDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPM 468
KDPEATSK K+G ++TGDVG++HPDGYLEIKDRSKDVIISGGENISS E+ES+LY HP
Sbjct: 410 KDPEATSKAFKNGWFFTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVEVESILYRHPR 469
Query: 469 VNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFI 528
V EAAVV P P W E PCAF+++ +E DIIQYCR +PRYM+PK V +
Sbjct: 470 VLEAAVVAMPHPKWGESPCAFITINKNQTGQNDDVSEDDIIQYCRKNLPRYMIPKKVEIM 529
Query: 529 DELPKTATGKVQKYVLGDIANSMSMS 554
++LPKTATGK+QK+ L +A ++ +S
Sbjct: 530 EQLPKTATGKIQKFELRTLAKTLVIS 555
>gi|326498677|dbj|BAK02324.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 468
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 279/464 (60%), Positives = 341/464 (73%), Gaps = 13/464 (2%)
Query: 92 NTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEIS 151
+T +T RT+S++L+HS SKL+ VD +L E + L PP P++VL+ D +E
Sbjct: 5 STASTPASTRTVSVLLRHSGSKLILVDPALVPVLGEALRLLPPGHPAPRVVLVEDPQEKD 64
Query: 152 SSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCY 211
S +P + TYE +L GDP+F WVRP S+ DPM+LNYT GTTSAPKGVV C+
Sbjct: 65 FSPAPAAAL-------TYEKLLEMGDPEFRWVRPASEWDPMILNYTSGTTSAPKGVVHCH 117
Query: 212 KAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFA 271
+ F++ +DSL+ W VP+Q LWTLPMFH NGWSF WG AVVG TNVCLR+ DA V+
Sbjct: 118 RGIFVVTMDSLVSWSVPEQPTYLWTLPMFHANGWSFPWGMAVVGGTNVCLRRVDAAEVYD 177
Query: 272 LIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP--VRILTAGSPPPAPVLLRTESLGFIVS 329
I + GVTH+CGAP+VLN+L+++PE Q P V ILTAG+PPPA VL RTE++GF VS
Sbjct: 178 TIARRGVTHLCGAPVVLNMLANAPEGVQRPLPGKVHILTAGAPPPAAVLGRTEAIGFDVS 237
Query: 330 HGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRD 389
HGYG TE AG+ + CAWK +WNKLPA ERA LKARQGVRT G+ EVDIVD ETG SV RD
Sbjct: 238 HGYGLTETAGLVLLCAWKGEWNKLPASERARLKARQGVRTPGMAEVDIVDGETGRSVPRD 297
Query: 390 GQTRGEIVMRGGSLMLGYLKDPEATSKCMK-DGRYYTGDVGMMHPDGYLEIKDRSKDVII 448
G T GEIV+RGG + +GY KD +AT ++ DG +YTGDVG+MHPDGYLEI+DRSKDVII
Sbjct: 298 GATMGEIVLRGGCVTMGYFKDEDATRAAIRDDGWFYTGDVGVMHPDGYLEIRDRSKDVII 357
Query: 449 SGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDI 508
SGGENISS E+ES+LY HP VNEAAVV RPD FW E PCAFVSLK G G + T ++
Sbjct: 358 SGGENISSVEVESLLYGHPAVNEAAVVARPDEFWGETPCAFVSLKEGA---GGVVTAAEV 414
Query: 509 IQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMS 552
I + R R+P YMVPKTVVF ELPKT+TGK+QKYVL ++A M
Sbjct: 415 IAWSRERMPGYMVPKTVVFRAELPKTSTGKIQKYVLRNLAKEMG 458
>gi|224077380|ref|XP_002305237.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
gi|118487892|gb|ABK95768.1| unknown [Populus trichocarpa]
gi|222848201|gb|EEE85748.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
Length = 584
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 277/557 (49%), Positives = 371/557 (66%), Gaps = 12/557 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD+L+ AN PLTP+ F++RA+ + S+IY T +TW QTY RC +LA SL S
Sbjct: 1 MDQLQKCDANYVPLTPVTFLKRASAVYANRTSVIYEGTRFTWRQTYERCCRLADSLRSLN 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ VVSV+APNIPA+YE+HFAVPM+GA+ NTINTRLDA+ I+ IL HS +K+ FVD
Sbjct: 61 VGKNDVVSVLAPNIPAVYEMHFAVPMAGAVLNTINTRLDAKNIATILIHSGAKVFFVDCQ 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
L + + P ++ DD + P + F YE ++ +G+P +
Sbjct: 121 YKELADKALRFL--EGPVPSIIASIDDVDT------PTGVRFGQF--EYEQLVQRGNPGY 170
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+ + + DP+ LNYT GTTSAPKGVV ++ ++ + ++ W + V LW+LPMF
Sbjct: 171 TGELIQDEWDPIALNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGSAPVYLWSLPMF 230
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSP-EAK 298
H NGW+FTWG A G TNVC+R A ++ I H VTHMC APIV N LL + P E +
Sbjct: 231 HCNGWTFTWGVAARGGTNVCIRNTSAKDMYQSIADHKVTHMCCAPIVFNILLEAKPHERR 290
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
++ PV ILT G+PPPA +L + ESLGF V+H YG TE G + C W+ KWNKLP +++
Sbjct: 291 EITSPVEILTGGAPPPASLLEKIESLGFHVTHAYGLTEATGPALVCEWQTKWNKLPQQDQ 350
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
+ LKARQG+ + L + DI D +T S+ RDG+T GEIV+RG S+M GY KDPEATSK
Sbjct: 351 SKLKARQGISILTLADADIKDLDTMASMPRDGKTMGEIVLRGSSIMKGYFKDPEATSKAF 410
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
++G + TGDVG++HPDGYLEIKDRSKDVIISGGENISS E+ESVLY HP V EAAVV P
Sbjct: 411 RNGWFVTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELESVLYRHPRVLEAAVVAMP 470
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
P W E PCAF+S+K ++ E +II YCR +PR+M+PK V F+ ELPKT+TGK
Sbjct: 471 HPKWGESPCAFISVKKNSNGETNDVKESEIIAYCRKNLPRFMIPKRVEFMPELPKTSTGK 530
Query: 539 VQKYVLGDIANSMSMSH 555
+QK+ L ++A + +++
Sbjct: 531 IQKFQLREVAKNFAVNE 547
>gi|224065064|ref|XP_002301652.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
gi|222843378|gb|EEE80925.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
Length = 586
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 276/553 (49%), Positives = 365/553 (66%), Gaps = 12/553 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD+L AN PLTP+ F++RA + S+IY T +TWSQTY RC +LA SL S
Sbjct: 1 MDQLLKCDANYVPLTPITFLKRANAVYANRTSVIYEGTRFTWSQTYERCCRLADSLRSLN 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ VVSV+APNIPA+YE+HFAVPM+GA+ NTIN RLDA+ I+ IL HS +K+ FVD+
Sbjct: 61 VGKNDVVSVLAPNIPAVYEMHFAVPMAGAVLNTINIRLDAKNIATILSHSGAKVFFVDYQ 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
L + +S P ++ DD + P + YE ++ +G+P +
Sbjct: 121 YKELASKALSFL--DGAVPSIIACIDDIDT------PTGVQFGQL--EYEQLVQRGNPGY 170
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+ + + DP+ LNYT GTTSAPKGVV ++ ++ ++ ++ W + V LW+LPMF
Sbjct: 171 TGELVQDEWDPIALNYTSGTTSAPKGVVYSHRGAYLSSLSLILGWEMGNAPVYLWSLPMF 230
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSP-EAK 298
H NGW+FTWG A G TNVC+R A ++ I +H VTHMC APIV N LL + P E +
Sbjct: 231 HCNGWTFTWGVAARGGTNVCIRNTSAKDMYHNIAEHAVTHMCCAPIVFNVLLEARPHERR 290
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
++ PV ILT G+PPPA +L E LGF V+H YG TE G + C W+ KWNKLP +++
Sbjct: 291 EITSPVEILTGGAPPPASLLQDIERLGFHVTHAYGLTEATGPALVCEWQKKWNKLPQQDQ 350
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A LKARQG+ + L + D+ D +T +SV RDG+T GEIV+RG S+M GY KDPEATSK
Sbjct: 351 AKLKARQGISILTLADADVKDLDTMVSVPRDGKTMGEIVLRGSSIMKGYFKDPEATSKAF 410
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
++G + TGDVG++HPDGYLEIKDRSKDVIISGGENISS E+ESVLY HP V EAAVV P
Sbjct: 411 RNGWFATGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELESVLYRHPRVLEAAVVAMP 470
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
P W E PCAF+S+K ++ E DII YC+ +P + VPK V F+ ELPKT+TGK
Sbjct: 471 HPKWGESPCAFISVKKNSNGDTNDVKESDIIAYCKKNLPHFTVPKRVEFMAELPKTSTGK 530
Query: 539 VQKYVLGDIANSM 551
+QK+ L +A +
Sbjct: 531 IQKFQLRALAQNF 543
>gi|224135073|ref|XP_002327560.1| predicted protein [Populus trichocarpa]
gi|222836114|gb|EEE74535.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 280/553 (50%), Positives = 364/553 (65%), Gaps = 12/553 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD+L AN PLTP+ F++RA + S+IY T +TWSQTY RC +LA SL S
Sbjct: 1 MDQLLKCDANYVPLTPITFLKRANAVYANRTSVIYEGTRFTWSQTYERCCRLADSLRSLN 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ VVSV+APNIPA+YE+HFAVPM+GA+ NTINTRLDAR I+ IL HS +K+ FVD+
Sbjct: 61 VGKNDVVSVLAPNIPAVYEMHFAVPMAGAVLNTINTRLDARNIATILSHSGAKVFFVDYQ 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
L + +S P ++ DD + P + YE ++ +G+P +
Sbjct: 121 YKELASKALSFL--DGAVPSIIACIDDIDT------PTGVQFGQL--EYEQLVQRGNPGY 170
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+ + + DP+ LNYT GTTSAPKGVV ++ ++ ++ ++ W + V LW+LPMF
Sbjct: 171 TDELVQDEWDPIALNYTSGTTSAPKGVVYSHRGAYLSSLSLILGWEMGNAPVYLWSLPMF 230
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSP-EAK 298
H NGW+FTWG A G TNVCLR A ++ I +H VTHMC APIV N LL + P E +
Sbjct: 231 HCNGWTFTWGVAARGGTNVCLRNTSAKDMYNNIAEHAVTHMCCAPIVFNILLEARPHERR 290
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
++ PV ILT G+PPPA +L + E LGF V+H YG TE G + C W+ KWNKLP +++
Sbjct: 291 EITSPVEILTGGAPPPASLLQKIERLGFHVTHAYGLTEATGPALVCEWQKKWNKLPQQDQ 350
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A LKARQG+ + L + D+ D +T +SV RDG+T GEIV+RG S+M GY KDPEATSK
Sbjct: 351 AKLKARQGISILTLADADVKDLDTMVSVPRDGKTMGEIVLRGSSIMKGYFKDPEATSKAF 410
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
++G TGDVG++HPDGYLEIKDRSKDVIISGGENISS E+ESVLY HP V EAAVV P
Sbjct: 411 RNGWLATGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELESVLYRHPRVLEAAVVAMP 470
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
P W E PCAF+S+K + E DII YC+ +PR+ VPK V F+ ELPKT+TGK
Sbjct: 471 HPRWGESPCAFISVKKNSSGDTNDVKESDIIAYCKKNLPRFTVPKRVEFMAELPKTSTGK 530
Query: 539 VQKYVLGDIANSM 551
V K L +A +
Sbjct: 531 VLKIQLRALAQNF 543
>gi|224086785|ref|XP_002307962.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
gi|222853938|gb|EEE91485.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
Length = 584
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 280/564 (49%), Positives = 378/564 (67%), Gaps = 18/564 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD+L AN PLTP+ F++RAA + S++Y +TW QTY RCL LA SL SF
Sbjct: 1 MDQLPKCDANYVPLTPINFLKRAAKVYGNRHSVVYEGIHFTWQQTYERCLCLADSLRSFD 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I+ VVSV+APNIPA+YE+HFAVPM+G + N INTRL+ ++ IL+HSE+K+ FVD+
Sbjct: 61 ISKNDVVSVLAPNIPALYEMHFAVPMAGGVINAINTRLNPNHVATILRHSEAKVFFVDYQ 120
Query: 121 SSSLLLEVVS-LFPPHSKTPKLVL----ITDDKEISSSSSPPPRIPPADFVD-TYENMLA 174
L + + L S + KLVL + DD E SP I F + YE ++
Sbjct: 121 FVQLARQALQILMSSESISSKLVLPSVVLIDDIE-----SPTGAI----FGEWEYEQLVR 171
Query: 175 KGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLL 234
KG+P + + DP+ LNYT GTTS PKGVV ++ F+ ++ +I W + + V +
Sbjct: 172 KGNPGHIPFEVQDEWDPIALNYTSGTTSEPKGVVYSHRGVFLGSLGVIIGWEMASEPVYM 231
Query: 235 WTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSS 293
W+LPMFH NGW+F WG A G TNVCLR A ++ I +H VTHMC APIV N LL +
Sbjct: 232 WSLPMFHCNGWTFAWGIAARGGTNVCLRNTTAKDMYRNIAQHRVTHMCCAPIVFNILLEA 291
Query: 294 SPEAK-QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNK 352
PE + ++ PV+IL G+PPPA +L + + LGF V+H YG TE+ G + C W+ KWN
Sbjct: 292 KPEERREIASPVQILVGGAPPPASLLEKMKPLGFHVTHSYGLTEV-GPALVCEWQAKWNN 350
Query: 353 LPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPE 412
LP+++++ + ARQG+ ++ L +D+ D T +SV RDG+T GEIV++G ++M GY KDP+
Sbjct: 351 LPSQDQSKIMARQGINSVALAHMDVKDLNTMISVPRDGKTMGEIVLKGSTVMKGYFKDPK 410
Query: 413 ATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEA 472
AT+K K+G + TGD+G++HPDGYLEIKDRSKDVIISGGENISS E+ESVLYSHP V EA
Sbjct: 411 ATAKAFKNGWFATGDIGVIHPDGYLEIKDRSKDVIISGGENISSVELESVLYSHPRVLEA 470
Query: 473 AVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELP 532
AVV P P W E PCAF++++ +D E DII YCR ++PRYMVPK V FI ELP
Sbjct: 471 AVVAMPHPVWGESPCAFLAIRKNSDGKSNDLKEADIIAYCRKKLPRYMVPKKVEFIPELP 530
Query: 533 KTATGKVQKYVLGDIANSMSMSHS 556
KT+TGK+QK+ L D+A + +S +
Sbjct: 531 KTSTGKIQKFQLRDLARNFVVSET 554
>gi|302821855|ref|XP_002992588.1| hypothetical protein SELMODRAFT_448826 [Selaginella moellendorffii]
gi|300139552|gb|EFJ06290.1| hypothetical protein SELMODRAFT_448826 [Selaginella moellendorffii]
Length = 547
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 277/547 (50%), Positives = 370/547 (67%), Gaps = 15/547 (2%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLS-SFGINPGHVV 67
AN PL+PL F+ R+A D S+I+ +++TWSQT RC +LAS++S FG+NPG VV
Sbjct: 3 ANHAPLSPLSFLYRSAAVFGDRTSLIHGASSFTWSQTLDRCRRLASAISLRFGVNPGAVV 62
Query: 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLE 127
SV+APN+ A+YE+HF VPM+GAI NTIN RLDARTI+++L H++S+ VFVD L+ +
Sbjct: 63 SVVAPNVAAIYEMHFGVPMAGAILNTINFRLDARTIALLLDHAQSRAVFVDSEFFPLVTQ 122
Query: 128 VVSLFPPHSK-TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK 186
+ L SK P+LVL+ D S ++ I YE +L P F V P
Sbjct: 123 ALQLLAESSKPLPQLVLVKDKSYTSQAAHSYGGIL------EYEELLENSSPDFPLVLPD 176
Query: 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
+ + LNYT GTTS PKGV+ ++ ++ ++ S++ W V V LWTLPMFH NGW
Sbjct: 177 DEEQSIALNYTSGTTSRPKGVLYTHRGAYLNSIASILLWEVGPFPVYLWTLPMFHCNGWC 236
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP--V 304
FTW A G TN+CLR A F I + VTH+ GAP VLN+++SS +++ D P V
Sbjct: 237 FTWAIAAQGGTNICLRNVTAKATFDAIAESSVTHLSGAPTVLNMIASSIPSERRDLPDKV 296
Query: 305 RILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
++ G+PPPA +L E LGF+V+H YG TE G + CAW+P WN P ERA LK+R
Sbjct: 297 AVIVGGAPPPAAILSSMEELGFVVTHAYGLTETYGPALVCAWRPHWNSFPLEERAKLKSR 356
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYY 424
QGV +GL + D+ DP T SV RDG+T GE+++RG ++M GY +D EAT + G ++
Sbjct: 357 QGVVHLGLHQADVKDPATMESVARDGRTLGEVMVRGSTVMKGYHRDDEATRAAFQGGWFH 416
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
TGD+G++HPDGY++++DRSKD+IISGGENISS E+ESVLY HP V EAAVV RPD FW E
Sbjct: 417 TGDLGVIHPDGYIQLRDRSKDIIISGGENISSIEVESVLYGHPEVLEAAVVARPDDFWGE 476
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
PCAFV+LK D GG T+ + II YCRAR+P +MVP++VVF ELPKT+TGKVQK++L
Sbjct: 477 TPCAFVTLK---DIGG-ATSARGIIDYCRARMPHFMVPRSVVF-GELPKTSTGKVQKFLL 531
Query: 545 GDIANSM 551
D A +M
Sbjct: 532 RDRARAM 538
>gi|115480603|ref|NP_001063895.1| Os09g0555800 [Oryza sativa Japonica Group]
gi|113632128|dbj|BAF25809.1| Os09g0555800 [Oryza sativa Japonica Group]
gi|125606588|gb|EAZ45624.1| hypothetical protein OsJ_30291 [Oryza sativa Japonica Group]
Length = 577
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 273/563 (48%), Positives = 368/563 (65%), Gaps = 20/563 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD L AN PL+P+ F+ RAA+ D S++Y T++TW QT+ RCL+LA++L S
Sbjct: 1 MDSLPKRDANYVPLSPITFLHRAASVYADRTSVVYGATSFTWRQTHHRCLRLAAALQSLA 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH- 119
++ VVSVIAPN PA+YE+HFAVPM+GA+ N INTRLDA ++ I++H+E K++FVD+
Sbjct: 61 VSKNDVVSVIAPNTPALYEMHFAVPMAGAVLNAINTRLDAANVAAIVRHAEPKVLFVDYQ 120
Query: 120 --------LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYEN 171
L + + + P LV+I D + + + R+ + YE
Sbjct: 121 FIRVATDALKAVMGDGDGDGGEVRAPLPLLVVIDDADKPTGA-----RVGELE----YEQ 171
Query: 172 MLAKGDPQFSWVRPKSD-LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQ 230
++A+GDP RP D D + LNYT GTTSAPKGVV ++ ++ + L+ W V +
Sbjct: 172 LVARGDPARYPPRPVEDEWDAVALNYTSGTTSAPKGVVYSHRGAYLNTMGLLLQWGVGHE 231
Query: 231 SVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNL 290
V LW+LPMFH NGW+FTWG A G TNVC+R A ++A HGVTHMC AP++ N+
Sbjct: 232 PVYLWSLPMFHCNGWTFTWGVAARGGTNVCIRAPTADAMYAAFAAHGVTHMCAAPVLFNI 291
Query: 291 LSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKW 350
L + L RPV +LT G+PPPA +L R E LGF V+H YG TE GV + C W+ +W
Sbjct: 292 LLDGACREPLRRPVEVLTGGAPPPAALLERVERLGFHVTHAYGMTEATGVVMVCEWREQW 351
Query: 351 NKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKD 410
+ LP ERA LKARQGV + L + D+ D +T SV RDG T GE+V+RG ++M GY K+
Sbjct: 352 DALPPSERARLKARQGVSALTLADADVKDLKTMESVPRDGATMGEVVLRGSNVMKGYFKN 411
Query: 411 PEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVN 470
P AT+ +DG + TGDVG++HPDGY+EIKDRSKDVIISGGENISS E+E+ LY HP V
Sbjct: 412 PRATADAFRDGWFLTGDVGVVHPDGYVEIKDRSKDVIISGGENISSVEVEAALYQHPAVR 471
Query: 471 EAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDE 530
EAAVV P P W E PCAFV+LK G + +E++++ +CR R+ YMVP+ VVF+DE
Sbjct: 472 EAAVVAMPHPHWGETPCAFVALKREFAGAGEV-SEQEVVSFCRNRMAHYMVPRKVVFVDE 530
Query: 531 LPKTATGKVQKYVLGDIANSMSM 553
LPK +TGKVQK L D+A + +
Sbjct: 531 LPKNSTGKVQKLALRDMARRLRL 553
>gi|125564660|gb|EAZ10040.1| hypothetical protein OsI_32344 [Oryza sativa Indica Group]
Length = 577
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 273/563 (48%), Positives = 368/563 (65%), Gaps = 20/563 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD L AN PL+P+ F+ RAA+ D S++Y T++TW QT+ RCL+LA++L S
Sbjct: 1 MDSLPKRDANYVPLSPITFLHRAASVYADRTSVVYGATSFTWRQTHHRCLRLAAALQSLA 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH- 119
++ VVSVIAPN PA+YE+HFAVPM+GA+ N INTRLDA ++ I++H+E K++FVD+
Sbjct: 61 VSKNDVVSVIAPNTPALYEMHFAVPMAGAVLNAINTRLDAANVAAIVRHAEPKVLFVDYQ 120
Query: 120 --------LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYEN 171
L + + + P LV+I D + + + R+ + YE
Sbjct: 121 FIRVATDALKAVMGDGDGDGGVVRAPLPLLVVIDDGDKPTGA-----RVGELE----YEQ 171
Query: 172 MLAKGDPQFSWVRPKSD-LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQ 230
++A+GDP RP D D + LNYT GTTSAPKGVV ++ ++ + L+ W V +
Sbjct: 172 LVARGDPARYPPRPVEDEWDAVALNYTSGTTSAPKGVVYSHRGAYLNTMGLLLQWGVGHE 231
Query: 231 SVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNL 290
V LW+LPMFH NGW+FTWG A G TNVC+R A ++A HGVTHMC AP++ N+
Sbjct: 232 PVYLWSLPMFHCNGWTFTWGVAARGGTNVCIRAPTADAMYAAFAAHGVTHMCAAPVLFNI 291
Query: 291 LSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKW 350
L + L RPV +LT G+PPPA +L R E LGF V+H YG TE GV + C W+ +W
Sbjct: 292 LLDGACREPLRRPVEVLTGGAPPPAALLERVERLGFHVTHAYGMTEATGVVMVCEWREQW 351
Query: 351 NKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKD 410
+ LP ERA LKARQGV + L + D+ D +T SV RDG T GE+V+RG ++M GY K+
Sbjct: 352 DALPPSERARLKARQGVSALTLADADVKDLKTMESVPRDGATMGEVVLRGSNVMKGYFKN 411
Query: 411 PEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVN 470
P AT+ +DG + TGDVG++HPDGY+EIKDRSKDVIISGGENISS E+E+ LY HP V
Sbjct: 412 PRATADAFRDGWFLTGDVGVVHPDGYVEIKDRSKDVIISGGENISSVEVEAALYQHPAVR 471
Query: 471 EAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDE 530
EAAVV P P W E PCAFV+LK G + +E++++ +CR R+ YMVP+ VVF+DE
Sbjct: 472 EAAVVAMPHPHWGETPCAFVALKREFAGAGEV-SEQEVVSFCRNRMAHYMVPRKVVFVDE 530
Query: 531 LPKTATGKVQKYVLGDIANSMSM 553
LPK +TGKVQK L D+A + +
Sbjct: 531 LPKNSTGKVQKLALRDMARRLRL 553
>gi|302769263|ref|XP_002968051.1| hypothetical protein SELMODRAFT_440236 [Selaginella moellendorffii]
gi|300164789|gb|EFJ31398.1| hypothetical protein SELMODRAFT_440236 [Selaginella moellendorffii]
Length = 552
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 273/547 (49%), Positives = 368/547 (67%), Gaps = 15/547 (2%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLS-SFGINPGHVV 67
AN PL+PL F+ R+A D S+I+ + +TWSQT RC +LAS++S G+NPG VV
Sbjct: 8 ANHAPLSPLSFLYRSAAVFGDRTSLIHGTSCFTWSQTLDRCRRLASAISLRLGVNPGAVV 67
Query: 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLE 127
SV+APN+ A+YE+HF VPM+GAI NTIN RLDARTI+++L H++S+ VFVD L+ +
Sbjct: 68 SVVAPNVAAIYEMHFGVPMAGAILNTINFRLDARTIALLLDHAQSRAVFVDSEFFPLVTQ 127
Query: 128 VVSLFPPHSK-TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK 186
+ L SK P+LVL+ D S ++ I YE +L P F V P
Sbjct: 128 ALQLLAESSKPLPQLVLVKDKSYTSQAAHSYGGIL------EYEELLENSSPDFPLVLPD 181
Query: 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
+ + LNYT GTTS PKGV+ ++ ++ ++ S++ W + V LWTLPMFH NGW
Sbjct: 182 DEEQSIALNYTSGTTSRPKGVLYTHRGAYLNSIASILLWEMGPFPVYLWTLPMFHCNGWC 241
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP--V 304
FTW A G TN+CLR A F I + VTH+ GAP VLN+++SS +++ D P V
Sbjct: 242 FTWAIAAQGGTNICLRNVTAKATFDAIAESSVTHLSGAPTVLNMIASSMPSERRDLPDKV 301
Query: 305 RILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
++ G+PPPA +L E LGF+V+H YG TE G + C+W+P WN P ERA LK+R
Sbjct: 302 AVIVGGAPPPAAILSSMEELGFVVTHAYGLTETYGPALVCSWRPHWNSFPLEERAKLKSR 361
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYY 424
QGV +GL + D+ DP T SV RDG+T GE+++RG ++M GY +D EAT + G ++
Sbjct: 362 QGVVHLGLHQADVKDPATMESVARDGRTLGEVMVRGSTVMKGYHRDDEATRAAFQGGWFH 421
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
TGD+G++HPDGY++++DRSKD+IISGGENISS E+ESVLY HP V EAAVV RPD FW E
Sbjct: 422 TGDLGVLHPDGYIQLRDRSKDIIISGGENISSIEVESVLYGHPEVLEAAVVARPDDFWGE 481
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
PCAFV+LK D GG T+ + II YCRAR+P +MVP+++VF ELPKT+TGKVQK++L
Sbjct: 482 TPCAFVTLK---DIGG-ATSARGIIDYCRARMPHFMVPRSLVF-GELPKTSTGKVQKFLL 536
Query: 545 GDIANSM 551
D A +M
Sbjct: 537 RDRARAM 543
>gi|357481321|ref|XP_003610946.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
gi|355512281|gb|AES93904.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
Length = 551
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 279/548 (50%), Positives = 368/548 (67%), Gaps = 22/548 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTP+ F+ER+A + SIIYND TYTWSQT++RC++LASS+S G++P HVV+
Sbjct: 9 ANYVPLTPISFLERSAIVYSNKVSIIYNDVTYTWSQTHQRCIKLASSISQLGVSPHHVVA 68
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL--- 125
V+APNIPAMYELHF VPMSGA+ T+NTR D+ +S++LKHS++K++FVDH +
Sbjct: 69 VLAPNIPAMYELHFGVPMSGAVLCTLNTRHDSSMVSLLLKHSDAKILFVDHELLDIAKGA 128
Query: 126 LEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRP 185
LE++S +K P LVLI + P + P + YEN++++G F RP
Sbjct: 129 LEILS--KSTAKLPLLVLILE-------GDAHPSVSPGTLI--YENLISEGKLDFEVKRP 177
Query: 186 KSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGW 245
K + DP+ LNYT GTTS+PKGVV ++ ++ ++ +++ + V LW +PMFH NGW
Sbjct: 178 KDEWDPISLNYTSGTTSSPKGVVYSHRGAYLNSLATILLNEMKSMPVYLWCVPMFHCNGW 237
Query: 246 SFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQLDRP 303
WG A G NVC R A +F I KH VTH GAP VLN L ++P K L R
Sbjct: 238 CLPWGIAAQGGANVCQRNVTAKGIFDNIFKHKVTHTGGAPTVLNSLINAPPDIRKPLPRK 297
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
V ++T G+PPP V R E LGF + H YG TE G C WKP+W+ L E+A K+
Sbjct: 298 VVVMTGGAPPPPDVFFRMEELGFDLVHSYGLTETYGPGSICTWKPEWSSLSREEQAKKKS 357
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQGV+ IGL +DI DP T SV D +T GE++ RG ++M GYLKD +AT + K G +
Sbjct: 358 RQGVQHIGLEGLDIKDPVTMKSVPADAKTMGEVMFRGNTVMNGYLKDLKATQESFKGGWF 417
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
TGD+G+ H DGY+E+KDRSKD+IISGGENIS+ E+E V+YSHP V EAAVVGRPD +W
Sbjct: 418 RTGDLGVKHSDGYIELKDRSKDIIISGGENISTIELEGVIYSHPAVVEAAVVGRPDEYWG 477
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E PCAFV LK G ++ TE++IIQ+C+ R+PR+M PKTVVF D LPKT+TGK QKYV
Sbjct: 478 ETPCAFVKLKEGHNA-----TEEEIIQFCQKRLPRFMAPKTVVFAD-LPKTSTGKTQKYV 531
Query: 544 LGDIANSM 551
L + A +M
Sbjct: 532 LKEKAKAM 539
>gi|224139708|ref|XP_002323238.1| predicted protein [Populus trichocarpa]
gi|222867868|gb|EEF04999.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 277/564 (49%), Positives = 376/564 (66%), Gaps = 18/564 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD+L AN PLTP+ F++RAA + S+++ T +TW QTY RCL+LA SL SF
Sbjct: 1 MDQLPKCDANYVPLTPINFLKRAAKVYGNRLSVVHERTHFTWQQTYERCLRLADSLRSFN 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I VVSV+APNIPA+YE+HFAVPM+G + N INTRL+ ++ IL+HSE+K+ FVD+
Sbjct: 61 IAKNDVVSVLAPNIPALYEMHFAVPMAGGVINAINTRLNPNHVATILRHSEAKVFFVDYQ 120
Query: 121 SSSLLLEVVS-LFPPHSKTPKLVL----ITDDKEISSSSSPPPRIPPADFVD-TYENMLA 174
L + + + S + KLVL + DD E SP I F + YE ++
Sbjct: 121 FVQLARQALQIMMTSESISSKLVLPSVVLIDDIE-----SPTGAI----FGEWEYEQLVR 171
Query: 175 KGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLL 234
KG+P + + + DP+ LNYT GTTS PKGVV ++ F+ ++ +I W + + V L
Sbjct: 172 KGNPGYIPYEVQDEWDPIALNYTSGTTSEPKGVVYSHRGVFLGSLGIIIGWEMESEPVYL 231
Query: 235 WTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNL-LSS 293
W+LPMFH NGW+ WG A G TNVCLR A ++ I +H VTHMC APIV N+ L +
Sbjct: 232 WSLPMFHCNGWTLAWGIAARGGTNVCLRNTTAKDMYRNIAQHKVTHMCCAPIVFNIILEA 291
Query: 294 SP-EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNK 352
P E +++ PV+IL G+PPPA +L + + LGF V+H YG TE+ G + C W+ KWN
Sbjct: 292 KPDERREISSPVQILVGGAPPPASLLEKMKPLGFHVTHSYGLTEV-GPALVCEWQAKWNN 350
Query: 353 LPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPE 412
LP+++++ + ARQG+ T+ L +D+ D T +SV DG+T GEIV+RG ++M GY KDP+
Sbjct: 351 LPSQDQSRIMARQGINTVALAHMDVKDLSTMISVPWDGKTMGEIVLRGSTVMKGYFKDPK 410
Query: 413 ATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEA 472
AT+K K+G + TGD+G++HPDGYLEIKDRSKDVIISGGENISS E+ESVLYSHP V EA
Sbjct: 411 ATAKAFKNGWFATGDIGVIHPDGYLEIKDRSKDVIISGGENISSVELESVLYSHPRVLEA 470
Query: 473 AVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELP 532
AVV P P W E PCAF+++K ++ E DII YCR ++P YMVPK V F+ ELP
Sbjct: 471 AVVAMPHPVWGESPCAFLAIKKNSEGKSDDVKEADIIAYCRKKLPHYMVPKKVEFMSELP 530
Query: 533 KTATGKVQKYVLGDIANSMSMSHS 556
KT+TGKVQK+ L D+ + +S +
Sbjct: 531 KTSTGKVQKFQLRDLTRNFVVSEN 554
>gi|449508747|ref|XP_004163400.1| PREDICTED: LOW QUALITY PROTEIN: probable acyl-activating enzyme
2-like [Cucumis sativus]
Length = 547
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 264/547 (48%), Positives = 366/547 (66%), Gaps = 14/547 (2%)
Query: 8 PANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVV 67
PAN PL+P+ F+ER A A D SI+Y ++TW +TY RCL+LAS+++ GI+ G VV
Sbjct: 8 PANDVPLSPISFLERTAKAYRDTTSIVYGSMSFTWEETYNRCLKLASAMTQLGISSGQVV 67
Query: 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLE 127
+ +APN+PAMYELHFAVPM+GA+ T+N+R D+ +S++L+HSE+K+ FVDH + E
Sbjct: 68 ATLAPNVPAMYELHFAVPMAGAVLCTLNSRHDSSMVSVLLRHSEAKIXFVDHQLFEVACE 127
Query: 128 VVSLFPP-HSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK 186
+ L S+ PKL+LI D + SS +S + V YE+++A G +F RPK
Sbjct: 128 AIRLLEQGDSEPPKLILILDSEHGSSPASI------SSNVYEYESLIASGSCEFEVRRPK 181
Query: 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
S+ DP+ +NYT GTTS PKGVV ++ ++ ++ +++ + V LWT PMFH NGW
Sbjct: 182 SEWDPISINYTSGTTSMPKGVVYSHRGAYLNSLATVLLGGMGSMPVYLWTCPMFHCNGWC 241
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPV 304
TWG A G TN+CLRK +F I H THM AP VLN++++SP + + L V
Sbjct: 242 LTWGVAAQGGTNLCLRKVSPKAIFEKIALHNATHMAAAPTVLNMIANSPVSDRRLLPNKV 301
Query: 305 RILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
+LT GSPPP VL + E +GF + H YG TE G C WKP W+ LP+ E++ ++AR
Sbjct: 302 DVLTGGSPPPPQVLAKMEEMGFRICHLYGLTETYGPGTCCTWKPMWDDLPSDEKSRIRAR 361
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYY 424
QG+ +GL EVD+ DP+T SV DG+T GEI+ RG ++M GY K+ +AT + K G ++
Sbjct: 362 QGIHHVGLQEVDVRDPKTMASVPTDGKTMGEIMFRGNTVMSGYFKNQKATEEAFKGGWFH 421
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
+GD + HPD Y+E+KDR KDVIISGGENIS+ E+E++L+SHP V EAAVV RPD W E
Sbjct: 422 SGDAAVKHPDHYIEVKDRLKDVIISGGENISTVEVETILFSHPSVLEAAVVARPDDHWGE 481
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
PCAFV LK G ++ T + +I YCR R+P YM P+T+VF D LPKT+TGKVQK++L
Sbjct: 482 TPCAFVVLKEGCNT----VTAQQLIDYCRDRLPHYMAPRTIVFQD-LPKTSTGKVQKFIL 536
Query: 545 GDIANSM 551
+ A +M
Sbjct: 537 RERAKAM 543
>gi|449462377|ref|XP_004148917.1| PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like [Cucumis
sativus]
gi|449479931|ref|XP_004155749.1| PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like [Cucumis
sativus]
Length = 574
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 272/560 (48%), Positives = 372/560 (66%), Gaps = 13/560 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ L AN LTP+ F++RA+ D SIIY T +TW QTY RC +LASSL
Sbjct: 1 MEMLLKCDANYSALTPITFLKRASAFYADRTSIIYEGTRFTWKQTYERCCRLASSLCRLT 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
++ VVSV+APN+PA+YE+HFAVPM+GAI NTINTRLD + I++IL+HSE+K+ FVD+
Sbjct: 61 VSKNDVVSVLAPNVPALYEMHFAVPMAGAILNTINTRLDIKNIALILRHSEAKIFFVDYQ 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
+ + L S LV++ DD + + + R+ + YE ++ GD F
Sbjct: 121 YIQEAKDALRLLVAESSPIPLVVVIDDIDTPTGA----RLGNLE----YEQLIYDGDANF 172
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+ V + D + LNYT GTTSAPKGVV ++ F+ + ++ W + V LWTLPMF
Sbjct: 173 TPVEVDDEWDSIALNYTSGTTSAPKGVVYSHRGAFLSTLSLVMGWEMGNAPVYLWTLPMF 232
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAK 298
H NGW+FTWG A G TN+C+R A +F I H VTHMC APIV ++ + + + +
Sbjct: 233 HCNGWTFTWGIAARGGTNICMRNTTASDIFRNINLHRVTHMCCAPIVFTIILEADNRDRR 292
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
++ PV +LT G+PPPAP+L + E+LGF ++H YG TE G + C W+ KWN LPA ++
Sbjct: 293 RVAWPVNVLTGGAPPPAPLLEKMEALGFHITHAYGLTEATGPALVCEWQEKWNVLPADQQ 352
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A+LKARQG+ + L +VD+ + +T SV DG+T GEIV+RG SLM GY KDP AT+ +
Sbjct: 353 ANLKARQGISILTLADVDVKNLKTMESVPHDGRTTGEIVLRGSSLMKGYFKDPAATAAAL 412
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
K+G + TGD+G+++PDGY+EIKDRSKDVIISGGENISS E+E+VLY HP V+EAAVV P
Sbjct: 413 KNGWFLTGDIGVIYPDGYVEIKDRSKDVIISGGENISSVEVETVLYRHPQVSEAAVVAMP 472
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
P W E PCAFV L+ G SG +E +++ +CR + YMVPK VVF+ ELPK A GK
Sbjct: 473 HPRWGESPCAFVVLQDGGGSG--RVSEAEMVAFCRKNLSHYMVPKKVVFVAELPK-ANGK 529
Query: 539 VQKYVLGDIANSMSMSHSRM 558
VQK++L + A + +S R+
Sbjct: 530 VQKFMLREQAKYLEVSEKRI 549
>gi|356569404|ref|XP_003552891.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
Length = 597
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 280/565 (49%), Positives = 370/565 (65%), Gaps = 25/565 (4%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD L+ AN LTPL F+ RAA + S+I+ T +TW+QTY RC +LA SL +
Sbjct: 1 MDNLQKCQANYTALTPLTFLMRAAACYANRTSVIHEGTRFTWAQTYERCRRLAFSLRALN 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I VVSV+APNIPAMYE+HFAVPM+GA+ NTINTRLDA+ I+ IL+HSE+K+ FVD+
Sbjct: 61 IARNDVVSVLAPNIPAMYEMHFAVPMAGAVLNTINTRLDAKNIATILRHSEAKVFFVDYE 120
Query: 121 SSSLLLEVVSLFPPHSKTPKL--VLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP 178
S E + L + L V++ DD + P RI + YE M+ G+P
Sbjct: 121 YVSKAKEALRLLMDDNNNNNLKKVIVIDD------INTPTRIRLGEL--EYEQMVHHGNP 172
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
+ + + P+ LNYT GTTS PKGVV ++ ++ + ++ W + + V LWTLP
Sbjct: 173 NYFPEGIQDEWTPIALNYTSGTTSEPKGVVYSHRGAYLSTLSLILGWEMGSEPVYLWTLP 232
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK 298
MFH NGW+FTWG A G TNVCLR A ++ I H VTHMC APIV N++ + +++
Sbjct: 233 MFHCNGWTFTWGVAARGGTNVCLRTTAARDIYRNIVVHNVTHMCCAPIVFNIILEAKQSE 292
Query: 299 QLD---------RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPK 349
++D PV ILT G+PPPA +L + ESLGF V+H YG TE G + C WK +
Sbjct: 293 RIDIKVINGKRKSPVEILTGGAPPPASLLEQIESLGFHVTHAYGLTEATGPALVCEWKKE 352
Query: 350 WNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLK 409
WN LP +E+A LKARQGV + + +VD+ + ET SV RDG+T GEIV++G +M+GY K
Sbjct: 353 WNMLPKKEQAQLKARQGVSVLTMADVDVKNLETMESVARDGRTMGEIVLKGSGIMMGYFK 412
Query: 410 DPEATSKCM-KDGRYY-TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHP 467
D +A+SK K+G ++ TGDVG++HPDGYLEIKDRSKDVIISGGENISS E+ES+LY HP
Sbjct: 413 DHKASSKAFGKNGDWFKTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVEVESLLYKHP 472
Query: 468 MVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMM----TTEKDIIQYCRARIPRYMVPK 523
V EAAVV P P W E PCAFVSL+ ++ TE +II YCR +P +MVPK
Sbjct: 473 RVLEAAVVAMPHPRWGETPCAFVSLRKNNNNSSSSKIDDVTEAEIIAYCRKNLPHFMVPK 532
Query: 524 TVVFIDELPKTATGKVQKYVLGDIA 548
V F++ELPKT+TGK+QK+ L +A
Sbjct: 533 VVKFMEELPKTSTGKIQKFELRVMA 557
>gi|449434092|ref|XP_004134830.1| PREDICTED: probable acyl-activating enzyme 2-like [Cucumis sativus]
Length = 547
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 264/547 (48%), Positives = 365/547 (66%), Gaps = 14/547 (2%)
Query: 8 PANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVV 67
PAN PL+P+ F+ER A A D SI+Y ++TW +TY RCL+LAS+++ GI+ G VV
Sbjct: 8 PANDVPLSPISFLERTAKAYRDTTSIVYGSMSFTWEETYNRCLKLASAMTQLGISSGQVV 67
Query: 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLE 127
+ +APN+PAMYELHFAVPM+GA+ T+N+R D+ +S++L+HSE+K++FVDH + E
Sbjct: 68 ATLAPNVPAMYELHFAVPMAGAVLFTLNSRHDSSMVSVLLRHSEAKIIFVDHQLFEVACE 127
Query: 128 VVSLFPP-HSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK 186
+ L S+ PKLVLI D + SS +S + V YE+++A G +F RPK
Sbjct: 128 AIRLLEQGDSEPPKLVLILDSEHGSSPASI------SSNVYEYESLIASGSCEFEVRRPK 181
Query: 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
S+ DP+ +NYT GTTS PKGVV ++ ++ ++ +++ + V LWT PMFH NGW
Sbjct: 182 SEWDPISINYTSGTTSMPKGVVYSHRGAYLNSLATVLLGGMGSMPVYLWTCPMFHCNGWC 241
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPV 304
TWG A G TN+CLRK +F I H THM AP VLN++++SP + + L V
Sbjct: 242 LTWGVAAQGGTNLCLRKVSPKAIFEKIALHNATHMAAAPTVLNMIANSPVSDRRLLPNKV 301
Query: 305 RILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
+LT GSPPP VL E +GF + H YG TE G C WKP W+ LP+ E++ ++AR
Sbjct: 302 DVLTGGSPPPPQVLAEMEEMGFRICHLYGLTETYGPGTYCTWKPMWDDLPSDEKSRIRAR 361
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYY 424
QG+ +GL EVD+ DP+T SV DG+T GEI+ RG ++M GY K+ +AT + G ++
Sbjct: 362 QGIHHVGLQEVDVRDPKTMASVPTDGKTMGEIMFRGNTVMSGYFKNQKATEEAFMGGWFH 421
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
+GD + HPD Y+E+KDR KDVIISGGENIS+ E+E++L+SHP V EAAVV RPD W E
Sbjct: 422 SGDAAVKHPDHYIEVKDRLKDVIISGGENISTVEVETILFSHPSVLEAAVVARPDDHWGE 481
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
PCAFV LK G ++ T + +I YCR R+P YM P+T+VF D LPKT+TGKVQK++L
Sbjct: 482 TPCAFVVLKEGCNT----VTAQQLIDYCRDRLPHYMAPRTIVFQD-LPKTSTGKVQKFIL 536
Query: 545 GDIANSM 551
+ A +M
Sbjct: 537 RERAKAM 543
>gi|356553223|ref|XP_003544957.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
Length = 552
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 284/559 (50%), Positives = 369/559 (66%), Gaps = 16/559 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD + AN PL+P+ F+ R A + SII+ +TW QTY RC +LASS+ S
Sbjct: 1 MDNIPKCEANYSPLSPVTFLTRCAKCYGNRISIIHEGIRFTWQQTYERCCRLASSIRSLN 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ VVSV+APNIPAMYE+HFAVPM+G + NTINTRLDA I+ IL HSE+K++FVD+
Sbjct: 61 LAKNDVVSVLAPNIPAMYEMHFAVPMAGGVLNTINTRLDANNIATILLHSEAKVLFVDYE 120
Query: 121 ---SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD 177
+ LE++ HS TP L+LI D I+S P + + YE ++ GD
Sbjct: 121 YVPKAKETLELLMGKKCHSSTPLLILIDD---INS----PTGLQFGEL--EYEQLVYNGD 171
Query: 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
P F + + P+ LNYT GTTSAPKGVV ++ ++ + ++ W + + V LWTL
Sbjct: 172 PTFVPEKIHDEWAPIALNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWKMGTEPVYLWTL 231
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNL-LSSSP- 295
PMFH NGW+FTWG A G TNVCLR A ++ I H VTHMC APIV N+ L + P
Sbjct: 232 PMFHCNGWTFTWGVAARGGTNVCLRNISAYNIYKNISLHHVTHMCCAPIVFNIILEAKPS 291
Query: 296 EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
E ++ V ILT G+PPP ++ + ESLGF V H YG TE G + C W+ +WN+LP
Sbjct: 292 ERIEIKSSVEILTGGAPPPPSLIEKIESLGFHVMHAYGSTEATGPALVCEWQQQWNQLPK 351
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
E+A LKARQG+ + L +VD+++ +T SV RDG+T GEIV+RG S+M GYLKDPE+TS
Sbjct: 352 VEQAQLKARQGISILTLEDVDVINVDTMESVPRDGKTMGEIVLRGSSIMKGYLKDPESTS 411
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
K DG ++TGDVG++H DGYLEIKDRSKDVIISGGENISS E+ESVLY HP V EAAVV
Sbjct: 412 KAFCDGWFHTGDVGVVHKDGYLEIKDRSKDVIISGGENISSVELESVLYKHPRVLEAAVV 471
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMM-TTEKDIIQYCRARIPRYMVPKTVVFIDELPKT 534
P P W E PCAFV LK + TE DII YCR +P +MVPK V F+++LPKT
Sbjct: 472 AMPHPRWGESPCAFVVLKKFEGNNKTNDVTEADIIGYCRKNMPPFMVPKLVKFVEDLPKT 531
Query: 535 ATGKVQKYVLGD-IANSMS 552
+TGK++K+ L D + N++S
Sbjct: 532 STGKIKKFELRDKVKNTVS 550
>gi|302768757|ref|XP_002967798.1| hypothetical protein SELMODRAFT_409095 [Selaginella moellendorffii]
gi|300164536|gb|EFJ31145.1| hypothetical protein SELMODRAFT_409095 [Selaginella moellendorffii]
Length = 547
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 272/547 (49%), Positives = 366/547 (66%), Gaps = 15/547 (2%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLS-SFGINPGHVV 67
AN PL+PL F+ R+A D S+I+ +++TWSQT RC +LAS++S G+NPG VV
Sbjct: 3 ANHAPLSPLSFLYRSAAVFGDKTSLIHGASSFTWSQTLDRCRRLASAISLRLGVNPGAVV 62
Query: 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLE 127
SV+APN+ A+YE+HF VPM GAI NTIN RLDARTI+++L H++S+ VFVD L+ +
Sbjct: 63 SVVAPNVAAIYEMHFGVPMVGAILNTINFRLDARTIALLLDHAQSRAVFVDSEFFPLVTQ 122
Query: 128 VVSLFPPHSK-TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK 186
+ L SK P+L+LI D S ++ I YE +L P F V P
Sbjct: 123 ALQLLAESSKPLPELILIKDKSYTSQAAHSYGGIL------EYEELLENSSPDFPLVFPD 176
Query: 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
+ + LNYT GTTS PKGV+ ++ ++ ++ S++ W + V LWTLPMFH NGW
Sbjct: 177 DEEQSIALNYTSGTTSRPKGVLYTHRGAYLNSIASILLWEMGPFPVYLWTLPMFHCNGWC 236
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP--V 304
FTW A G TN+CLR A F I + VTH+ GAP VLN+++SS +++ D P V
Sbjct: 237 FTWAIAAQGGTNICLRNVTAKATFDAIAESSVTHLSGAPTVLNMIASSIPSERRDLPHKV 296
Query: 305 RILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
+ G+PPP +L E LGF+V+H YG TE G + CAW+P WN P ERA LK+R
Sbjct: 297 AVRVGGAPPPPAILSSMEELGFVVTHSYGLTETYGPALFCAWRPHWNSFPLEERAKLKSR 356
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYY 424
QGV +GL + D+ DP T SV RDG+T GE+++RG ++M GY +D EAT + G ++
Sbjct: 357 QGVVHLGLHQADVKDPATMESVARDGRTLGEVMVRGSTVMKGYHRDDEATRAAFQGGWFH 416
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
TGD+G++HPDGY++++DRSKD+IISGGENISS E+ES+LY HP V EAAVV RPD FW E
Sbjct: 417 TGDLGVIHPDGYIQLRDRSKDIIISGGENISSIEVESILYGHPEVLEAAVVARPDDFWGE 476
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
PCAFV+LK SGG T+ ++II YCRAR+P +MVP++VVF LPKT+TGKVQK++L
Sbjct: 477 TPCAFVTLKR---SGG-ATSAREIIDYCRARLPHFMVPRSVVF-GALPKTSTGKVQKFLL 531
Query: 545 GDIANSM 551
D A +M
Sbjct: 532 RDRARAM 538
>gi|406821147|gb|AFS60176.1| cinnamate:CoA ligase [Hypericum calycinum]
Length = 572
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 278/554 (50%), Positives = 362/554 (65%), Gaps = 16/554 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD+L AN PL+P+ F+ RAA + SIIY +T +TW QTY RC +LAS L S
Sbjct: 1 MDKLPKCGANYVPLSPITFLNRAAKVYANRTSIIYENTRFTWGQTYERCCRLASYLRSIN 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I+ VVSV+APN+PAM E+HFAVPM+GAI NTINTRLDA+ I+ IL+HSE+KL FVD+
Sbjct: 61 ISKNDVVSVLAPNVPAMLEMHFAVPMAGAILNTINTRLDAKNIATILRHSEAKLFFVDYQ 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITD-DKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
L E +S TP +VLI D DK P I YE ++ +G
Sbjct: 121 LLDLAREALSGM---ESTPLVVLIDDVDK--------PTGIGRHGL--EYEQLIKRGRSD 167
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F+ + DP+ LNYT GTTSAPKGVV ++ ++ + ++ W + + V LW+LPM
Sbjct: 168 FAPDELVDEWDPIALNYTSGTTSAPKGVVYSHRGAYLSTLSLILGWEMGNEPVYLWSLPM 227
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAK 298
FH NGW+FTWG A G TNVC+R A ++ I HGVTHMC APIV N LL + EA+
Sbjct: 228 FHCNGWTFTWGIAARGGTNVCIRNTTAEDMYRNIANHGVTHMCCAPIVFNILLEAGSEAR 287
Query: 299 Q-LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
+ + RPV++LT G+PPP +L + E LGF ++H YG TE G + C W+ +W+ LP +
Sbjct: 288 RPITRPVQVLTGGAPPPESLLAKMEPLGFKITHAYGLTEATGPALVCEWQAQWDGLPKGD 347
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A LKARQGV + L + D+ + T SV RDG+T GEIV+RG S+M+GY KD E TSK
Sbjct: 348 QAKLKARQGVSILTLADADVKNLATMESVPRDGKTMGEIVLRGSSIMMGYYKDQETTSKA 407
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
K+G + TGDVG++HPDGY+EIKDRSKDVIISGGENISS E+ESVLY HP V EAAVV
Sbjct: 408 FKNGWFATGDVGVVHPDGYIEIKDRSKDVIISGGENISSVEVESVLYKHPRVLEAAVVAM 467
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
P W E PCAFV+++ E DI+++CRA +P +MVPK V F+ ELPK +T
Sbjct: 468 PSEKWGESPCAFVAIRKNEKGSRNDVKEVDILRFCRANMPHFMVPKRVAFLAELPKNSTN 527
Query: 538 KVQKYVLGDIANSM 551
K+ K L D+A +
Sbjct: 528 KILKAQLRDMAKAF 541
>gi|15218935|ref|NP_176786.1| AMP-dependent synthetase and ligase-like protein [Arabidopsis
thaliana]
gi|75308878|sp|Q9C8D4.1|AAE11_ARATH RecName: Full=Butyrate--CoA ligase AAE11, peroxisomal; AltName:
Full=Acyl-activating enzyme 11; AltName:
Full=Butyryl-CoA synthetase
gi|12322610|gb|AAG51304.1|AC026480_11 AMP-binding enzyme, putative [Arabidopsis thaliana]
gi|28393804|gb|AAO42311.1| putative AMP-binding enzyme [Arabidopsis thaliana]
gi|133778844|gb|ABO38762.1| At1g66120 [Arabidopsis thaliana]
gi|332196343|gb|AEE34464.1| AMP-dependent synthetase and ligase-like protein [Arabidopsis
thaliana]
Length = 572
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 277/559 (49%), Positives = 371/559 (66%), Gaps = 19/559 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD L AN+ PLTP+ F++RA+ + SIIY T +TW QTY RC +LA+SL S
Sbjct: 1 MDNLVLCEANNVPLTPITFLKRASECYPNRTSIIYGQTRFTWPQTYDRCCRLAASLLSLN 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I VVS++APN+PAMYE+HF+VPM+GA+ N INTRLDA+TI+IIL+H+E K++FVD+
Sbjct: 61 ITRNDVVSILAPNVPAMYEMHFSVPMTGAVLNPINTRLDAKTIAIILRHAEPKILFVDYE 120
Query: 121 SSSLLLEVVSLFPPHSKTP--KLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP 178
+ L+ EV+ L P + P +++LI EI S++ P + +D YE ++ KG+P
Sbjct: 121 FAPLIQEVLRLIPTYQSQPHPRIILIN---EIDSTTKPFSK-----ELD-YEGLIRKGEP 171
Query: 179 ----QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLL 234
S R ++ DP+ LNYT GTT+ PKGVV ++ ++ A+ S+I W + V L
Sbjct: 172 TPSSSASMFRVHNEHDPISLNYTSGTTADPKGVVISHQGAYLSALSSIIGWEMGIFPVYL 231
Query: 235 WTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS 294
WTLPMFH NGW+ TW A G TNVC+R AP ++ I HGVTHM P V L
Sbjct: 232 WTLPMFHCNGWTHTWSVAARGGTNVCIRHVTAPEIYKNIELHGVTHMSCVPTVFRFLLEG 291
Query: 295 PEAKQLDR--PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNK 352
Q + PV++LT GS PPA ++ + E LGF V HGYG TE G + C W+ +WNK
Sbjct: 292 SRTDQSPKSSPVQVLTGGSSPPAVLIKKVEQLGFHVMHGYGLTEATGPVLFCEWQDEWNK 351
Query: 353 LPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPE 412
LP ++ L+ RQGVR + L +VD+ + +T SV RDG+T GEIV++G SLM GYLK+P+
Sbjct: 352 LPEHQQIELQQRQGVRNLTLADVDVKNTKTLESVPRDGKTMGEIVIKGSSLMKGYLKNPK 411
Query: 413 ATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEA 472
ATS+ K G TGD+G++HPDGY+EIKDRSKD+IISGGENISS E+E VLY + V EA
Sbjct: 412 ATSEAFKHGWLNTGDIGVIHPDGYVEIKDRSKDIIISGGENISSIEVEKVLYMYQEVLEA 471
Query: 473 AVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELP 532
AVV P P W E PCAFV LK G + G++T+E D+I+YCR +P +M PK VVF ELP
Sbjct: 472 AVVAMPHPLWGETPCAFVVLKKGEE--GLVTSEGDLIKYCRENMPHFMCPKKVVFFQELP 529
Query: 533 KTATGKVQKYVLGDIANSM 551
K + GK+ K L DIA ++
Sbjct: 530 KNSNGKILKSKLRDIAKAL 548
>gi|255561377|ref|XP_002521699.1| AMP dependent ligase, putative [Ricinus communis]
gi|223539090|gb|EEF40686.1| AMP dependent ligase, putative [Ricinus communis]
Length = 544
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 270/560 (48%), Positives = 369/560 (65%), Gaps = 30/560 (5%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ L N PL+P F+ERAA D S++Y D Y+WS TY RC++LAS+L+ G
Sbjct: 1 MEGLVCCSTNYVPLSPTSFLERAAKVYRDRTSVVYGDVKYSWSGTYDRCVKLASALAQLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I+ G VV+ +APN+PAMYELHFAVPM+G + T+NTR D+ +SI+L HSE+K++FVD
Sbjct: 61 ISHGDVVATLAPNVPAMYELHFAVPMAGGVLCTLNTRYDSNMVSILLDHSEAKIIFVDFQ 120
Query: 121 SSSLLLEVVS-----LFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT---YENM 172
LL+V S L K+P +VLI++ +S P F YE++
Sbjct: 121 ----LLDVASKALELLANTERKSPIVVLISESDGLS----------PTGFTSNTYEYESL 166
Query: 173 LAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSV 232
LA G+ F RPK++ DP+ +NYT GTTS PKGVV ++ ++ ++ ++ + V
Sbjct: 167 LANGNKGFEIRRPKNEWDPISVNYTSGTTSRPKGVVYSHRGAYLNSLATVFLHGIGAMPV 226
Query: 233 LLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLS 292
LWT+PMFH NGW TWG A G TN+C+RK +F I +H VTHM GAP VLN++
Sbjct: 227 YLWTVPMFHCNGWCLTWGVAAQGGTNICIRKVTPKAIFDSIGQHNVTHMGGAPTVLNMIV 286
Query: 293 SSP--EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKW 350
+SP + + L V I+T G+PPP ++ + E LGF VSH YG TE G CAWKP+W
Sbjct: 287 NSPVSDRRTLPHKVEIMTGGAPPPPQIIFKMEELGFGVSHLYGLTETYGPGTYCAWKPEW 346
Query: 351 NKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKD 410
+ LP ERA LKARQG+ +GL +VD+ DP T SV DG+T GEIV RG ++M GYLKD
Sbjct: 347 DSLPPDERAKLKARQGIHHLGLEDVDVRDPMTQESVPADGKTIGEIVFRGNTVMSGYLKD 406
Query: 411 PEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVN 470
+AT + + G + +GD+ + HPDGY+E+KDR KD+IISGGENIS+ E+E+VLYSHP +
Sbjct: 407 LKATEEAFQGGWFRSGDLAVKHPDGYIEVKDRLKDIIISGGENISTVEVETVLYSHPAIF 466
Query: 471 EAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDE 530
EAAVV RPD W + PCAFV LK G + +E+DII++CR R+P YM P+TV+F ++
Sbjct: 467 EAAVVARPDDHWGQTPCAFVKLKE-----GFVVSEQDIIKFCRDRLPHYMAPRTVIF-ED 520
Query: 531 LPKTATGKVQKYVLGDIANS 550
LP+T+TGKVQK++L A +
Sbjct: 521 LPRTSTGKVQKFILRQKAKA 540
>gi|29893231|gb|AAP03024.1| acyl-activating enzyme 11 [Arabidopsis thaliana]
Length = 572
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 276/559 (49%), Positives = 368/559 (65%), Gaps = 19/559 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD L AN+ PLTP+ F++RA+ + SIIY T +TW QTY RC +LA+SL S
Sbjct: 1 MDNLVLCEANNVPLTPITFLKRASECYPNRTSIIYGQTRFTWPQTYDRCCRLAASLLSLN 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I VVS++APN+PAMYE+HF+VPM+GA+ N INTRLDA+TI+IIL+H+E K++FVD+
Sbjct: 61 ITRNDVVSILAPNVPAMYEMHFSVPMTGAVLNPINTRLDAKTIAIILRHAEPKILFVDYE 120
Query: 121 SSSLLLEVVSLFPPHSKT--PKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP 178
+ L+ EV+ L P P+++LI EI S++ P + +D YE ++ KG+P
Sbjct: 121 FAPLIQEVLRLIPTDQSQAHPRIILIN---EIDSTTKPFSK-----ELD-YEGLIRKGEP 171
Query: 179 ----QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLL 234
S R ++ DP+ LNYT GTT+ PKGVV ++ ++ A+ S+I W + V L
Sbjct: 172 TPSSSASMFRVHNEHDPISLNYTSGTTADPKGVVISHRGAYLSALSSIIGWEMGIFPVYL 231
Query: 235 WTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS 294
WTLPMFH NGW+ TW A G TNVC+R AP ++ I HGVTHM P V L
Sbjct: 232 WTLPMFHCNGWTHTWSVAARGGTNVCIRHVTAPEIYKNIELHGVTHMSCVPTVFRFLLEG 291
Query: 295 PEAKQLDR--PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNK 352
Q + PV++LT GS PPA ++ + E LGF V HGYG TE G + C W+ +WNK
Sbjct: 292 SRTDQSPKSSPVQVLTGGSSPPAVLIKKVEQLGFHVMHGYGLTEATGPVLFCEWQDEWNK 351
Query: 353 LPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPE 412
LP ++ L+ RQGVR + L +VD+ + +T SV RDG+T GEIV++G SLM GYLK+P+
Sbjct: 352 LPEHQQMELQQRQGVRNLTLADVDVKNTKTLESVPRDGKTMGEIVIKGSSLMKGYLKNPK 411
Query: 413 ATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEA 472
ATS+ K G TGD+G++HPDGY+EIKDRSKD+IISGGENISS E+E VLY + V EA
Sbjct: 412 ATSEAFKHGWLNTGDIGVIHPDGYVEIKDRSKDIIISGGENISSIEVEKVLYMYQQVLEA 471
Query: 473 AVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELP 532
AVV P P W E PCAFV LK G + +T+E D+I+YCR +P +M PK VVF ELP
Sbjct: 472 AVVAMPHPLWGETPCAFVVLKKGDEES--VTSEGDLIKYCRENMPHFMCPKKVVFFQELP 529
Query: 533 KTATGKVQKYVLGDIANSM 551
K + GK+ K L DIA ++
Sbjct: 530 KNSNGKILKSKLRDIAKAL 548
>gi|357517755|ref|XP_003629166.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
gi|355523188|gb|AET03642.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
Length = 684
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/550 (48%), Positives = 368/550 (66%), Gaps = 24/550 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
ANS PL+P+ F+ERAA C D S++Y Y W QT++RCL+LASSL+ GI+ G VV+
Sbjct: 51 ANSVPLSPINFLERAAKVCRDRTSLVYGSLKYNWGQTHQRCLKLASSLTQLGISRGDVVA 110
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+APN+PAMYELHFAVPM+GAI T+N+RLDA +S++L+HS++K++F DH LLE+
Sbjct: 111 TLAPNVPAMYELHFAVPMAGAILCTLNSRLDAAMVSVLLEHSQAKILFADHQ----LLEI 166
Query: 129 VS-----LFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L +K P +VL+ D S S P RI + YE ++ GD F+ V
Sbjct: 167 AQGALDLLRERGTKLPIIVLVND-----SDFSSPIRITSTTY--EYEKLMEVGDNGFNIV 219
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
+P+S+ DP+ +NYT GTTS PKGVV ++ ++ ++ +++ + + V LW +P+FH N
Sbjct: 220 KPQSEWDPISINYTSGTTSRPKGVVYSHRGAYLNSLATVLLFQMDIFPVYLWNVPLFHCN 279
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLD 301
GW WG A TN+CLRK +F I +H VTHM GAP VLN++ S+S K L+
Sbjct: 280 GWCLPWGVAAQFGTNICLRKVSPRNIFDNIIQHKVTHMGGAPTVLNMILNSASTHRKPLN 339
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V ++T GSPPP +L + E +GF +SH YG TE G CAW+P+W+ LP ER+ +
Sbjct: 340 HKVLVMTGGSPPPPQILSKIEEIGFSISHLYGLTETYGPGSFCAWRPEWDTLPPEERSKM 399
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGV + L E+D+ D T SV DG+T GEI+ RG ++M GY +D +AT + KDG
Sbjct: 400 KARQGVPHVALEEIDVKDSATMESVLADGKTVGEIMFRGNTVMSGYFRDLKATEEAFKDG 459
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+ + H DGY+E+KDR KD+I+SGGENISS E+E+VLYSHP V EAAVV RPD
Sbjct: 460 WFHSGDLAVKHSDGYIEVKDRLKDIIVSGGENISSVEVETVLYSHPAVLEAAVVARPDDH 519
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W + PCAF+ LK G D ++II +CR R+P YM PKTV+F+D +PKT+TGK+QK
Sbjct: 520 WGQTPCAFLKLKEGFDQNA-----QEIIAFCRERLPHYMAPKTVIFLD-MPKTSTGKIQK 573
Query: 542 YVLGDIANSM 551
Y+L + A ++
Sbjct: 574 YILREKAKAL 583
>gi|357460691|ref|XP_003600627.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
gi|355489675|gb|AES70878.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
Length = 582
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 278/555 (50%), Positives = 363/555 (65%), Gaps = 20/555 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD L AN LTPL F+ RA+ + + S+I+ T +TWSQTY RC +LASSL +
Sbjct: 1 MDNLPKCRANYTILTPLTFLMRASASYANRTSVIHEGTRFTWSQTYDRCRRLASSLRALN 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I VVSV+APNIPAMYE+HFAVPM+GA+ NTIN RL+A I+ IL+HSE+K+ FVD+
Sbjct: 61 IAKNDVVSVLAPNIPAMYEMHFAVPMAGAVLNTINHRLNAANIATILQHSEAKVFFVDYE 120
Query: 121 SSS-------LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENML 173
S LL+E +S P LV++ DD + P I + YE M+
Sbjct: 121 FVSKAKDALRLLMEEKDQTEQYSSLP-LVIVIDD------INNPTGIRLGEL--EYEQMV 171
Query: 174 AKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVL 233
G+P + + + P+ LNYT GTTS PKGVV ++ ++ + ++ W + + V
Sbjct: 172 HHGNPNYLPEEIQDEWSPITLNYTSGTTSEPKGVVYSHRGAYLSTLSLILGWEMGSEPVY 231
Query: 234 LWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNL-LS 292
LWTLPMFH NGW+FTWG A G TN+C+R A ++ I + VTHMC API+ N+ L
Sbjct: 232 LWTLPMFHCNGWTFTWGVAARGGTNICIRNTAASDIYRAINLYNVTHMCCAPIIFNIILG 291
Query: 293 SSPEAKQ-LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWN 351
+ P K+ + PV ILT G+PPPA +L + E LGF V+H YG TE G + C W+ KWN
Sbjct: 292 AKPSEKRVIKSPVNILTGGAPPPASLLEKIEPLGFHVTHAYGLTEATGPALVCEWQKKWN 351
Query: 352 KLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDP 411
LP RE++ LKARQGV + L +VD+ + ET SV RDG+T GEI+++G +M+GY KD
Sbjct: 352 VLPKREQSMLKARQGVSVLTLADVDVKNLETMESVVRDGKTMGEIMLKGSGIMMGYFKDK 411
Query: 412 EATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNE 471
EAT+K DG + TGDVG++H DGYLEIKDRSKDVIISGGENISS E+E+VLYSHP V E
Sbjct: 412 EATAKAFGDGWFRTGDVGVIHKDGYLEIKDRSKDVIISGGENISSVEVENVLYSHPKVLE 471
Query: 472 AAVVGRPDPFWQEIPCAFVSLKTGTD--SGGMMTTEKDIIQYCRARIPRYMVPKTVVFID 529
AAVV P P W E PCAFV+L + S TE +II YCR +P +MVPK VVF++
Sbjct: 472 AAVVAMPHPKWGESPCAFVTLNKNEEVKSDFCCVTEDEIITYCRKNLPHFMVPKMVVFME 531
Query: 530 ELPKTATGKVQKYVL 544
+LPKT TGK+QK+ L
Sbjct: 532 DLPKTLTGKIQKFEL 546
>gi|356538992|ref|XP_003537984.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
Length = 553
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 275/550 (50%), Positives = 371/550 (67%), Gaps = 23/550 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI--NPGHV 66
AN PLTP+ F++RAA D S++ D TYTW+QT++RC++LASS+S G+ +P V
Sbjct: 9 ANYVPLTPISFLDRAAVVYRDRLSLVSGDVTYTWTQTHQRCIKLASSISQLGVGLSPLDV 68
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL- 125
V+V+APN+PAMYELHFAVPMSGA+ T+NTR D+ +S++LKHSE+KLVFVD+ +
Sbjct: 69 VAVLAPNVPAMYELHFAVPMSGAVLCTLNTRHDSAMVSLLLKHSEAKLVFVDYQLLDIAK 128
Query: 126 --LEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L+++S +K P LVLI + S P P P A TYE+++AKG QF
Sbjct: 129 GALQILSKIT--TKLPHLVLILE------SGHPSP--PHAKGTLTYEDLIAKGSLQFEVR 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
RPK + DP+ LNYT GTTS PKGV+ ++ ++ ++ +++ + V LW +PMFH N
Sbjct: 179 RPKDEWDPISLNYTSGTTSNPKGVIYSHRGAYLNSLATVLLNEMRSMPVYLWCVPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW W A G TNVC R A +F I +H VTHM GAP VLN++ +SP K L
Sbjct: 239 GWCLPWAIAAQGGTNVCQRSVTAEGIFHNIFRHKVTHMGGAPTVLNMIINSPPKVRKPLP 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V ++T G+PPP V++R E LGF V+H YG TE G C WKP+W+ L +A L
Sbjct: 299 GKVEVMTGGAPPPPDVIIRMEELGFNVTHSYGLTETYGPGSICTWKPEWDNLSRDAQAKL 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGV +G+ ++D+ DP T SV D +T GE++ RG ++M GYLKD +AT + K G
Sbjct: 359 KARQGVAHVGMEDLDVKDPHTMKSVPADAKTMGEVMFRGNTVMNGYLKDLKATQEAFKGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G+ HPDGY+E+KDRSKD+IISGGENIS+ E+E V++SHP V EAAVVGRPD +
Sbjct: 419 WFWTGDLGVKHPDGYIELKDRSKDIIISGGENISTIELEGVIFSHPAVFEAAVVGRPDDY 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK G + T +IIQ+C+ R+PR+M P+TVVF D LPKT+TGK QK
Sbjct: 479 WGETPCAFVKLKEGCSA-----TSDEIIQFCQNRLPRFMAPRTVVFTD-LPKTSTGKTQK 532
Query: 542 YVLGDIANSM 551
+VL + A +M
Sbjct: 533 FVLREKAKAM 542
>gi|237682462|gb|ACR10278.1| putative benzoate-CoA ligase [Brassica rapa subsp. pekinensis]
Length = 567
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 266/565 (47%), Positives = 370/565 (65%), Gaps = 18/565 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD L AN+ PLTP+ F++RA+ + SIIY +T +TW QTY RC +LA+SL S
Sbjct: 1 MDNLALCEANNAPLTPITFLKRASECYPNRTSIIYGETRFTWPQTYDRCCRLAASLLSLN 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I +VSV+APNIPA+YE+HFAVPM+GA+ N INTRLDA++I+ I +H++ K++FVD
Sbjct: 61 IAKNDIVSVLAPNIPAIYEMHFAVPMAGAVLNPINTRLDAKSIAAIFRHAQPKILFVDRN 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
+L + L P + LV+ D+ + P RI D +D YE ++ +G+P
Sbjct: 121 LETLARATLHLLPDEEQRNLLVIFIDEPD------RPKRISSNDQLD-YEELIRRGEPSS 173
Query: 181 SWV----RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
S V R +++ DP+ LNYT GTTS PKGVV ++ ++ ++ ++ W + K V LWT
Sbjct: 174 SSVARMFRIQNEHDPISLNYTSGTTSEPKGVVVSHRGVYLSSLSVIMGWEMGKFPVYLWT 233
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSS 294
LPMFH NGW+ TW A G TNVC+R AP ++ I HGVTHMC P VLN+L +S
Sbjct: 234 LPMFHCNGWNLTWSVAARGGTNVCIRHVSAPEIYKNIESHGVTHMCCVPTVLNILLQGNS 293
Query: 295 PEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLP 354
+ Q +PV++LT GS PP ++ + + LGF V H YG TE G + C W +WN+LP
Sbjct: 294 LDMSQRSKPVQVLTGGSSPPTALVEKVQRLGFEVLHVYGLTEATGAVLFCEWHDEWNRLP 353
Query: 355 ARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEAT 414
+++ +KARQGV + L +VD+ + +T SV RDG T GEIVM+G S+M GYL++P+AT
Sbjct: 354 EKQQMEMKARQGVGILALADVDVKNKKTQESVPRDGTTMGEIVMKGSSIMKGYLRNPKAT 413
Query: 415 SKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474
S+ K G +TGD+G++HPDG+++IKDRSKD+IISGGENI+S E+E+VLY + V EAAV
Sbjct: 414 SEAFKHGWLHTGDIGVIHPDGHIQIKDRSKDIIISGGENINSIEVENVLYKYKKVLEAAV 473
Query: 475 VGRPDPFWQEIPCAFVSLKTGTDSGG-----MMTTEKDIIQYCRARIPRYMVPKTVVFID 529
V P P W E PCAFV L+ G MT E D+I+YCR +P +M PK VVF+
Sbjct: 474 VAMPHPMWGETPCAFVVLEKRKTGQGDCDDQFMTREGDLIKYCRENLPHFMCPKRVVFMG 533
Query: 530 ELPKTATGKVQKYVLGDIANSMSMS 554
ELPK GK+ K+ L +IA S+ ++
Sbjct: 534 ELPKNGNGKILKHKLRNIAKSLVIN 558
>gi|125542244|gb|EAY88383.1| hypothetical protein OsI_09845 [Oryza sativa Indica Group]
Length = 578
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 268/554 (48%), Positives = 357/554 (64%), Gaps = 14/554 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M++L PAN PL+P+GF+ RA D S+IY +TWSQTY RC +LASSL S G
Sbjct: 1 MEQLPKRPANYVPLSPVGFLPRANAVYGDRTSVIYGRVRFTWSQTYARCRRLASSLLSLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ VVSV+APN+PAMYE+HFAVPM+GA+ NTINTRLDAR ++ IL+HSE+K+ FVD+
Sbjct: 61 VRNHDVVSVLAPNVPAMYEMHFAVPMAGAVLNTINTRLDARAVAGILRHSEAKVFFVDYQ 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
L + + + + LV + DD ++ P + + YE ++A+GDP
Sbjct: 121 YVRLASDALQIVADEGRHVPLVAVIDDIDV------PTGVRLGEL--EYEGLVARGDPAA 172
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+ D + LNYT GTTSAPKGVV ++ ++ + L+ WVV + V LWTLPMF
Sbjct: 173 ELPSLADEWDAVTLNYTSGTTSAPKGVVYSHRGAYLSTMSLLMSWVVGDEPVYLWTLPMF 232
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--K 298
H NGW+FTWG A G NVC+R A ++ I +HGVTH+C AP+V N+L EA K
Sbjct: 233 HCNGWTFTWGMAARGGVNVCIRDARAADIYRAIARHGVTHLCCAPVVFNILLEGGEAAAK 292
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
QL PV +LT G+PPPA +L R E +GF V+H YG TE G ++C W+ +W++LP ER
Sbjct: 293 QLAAPVHVLTGGAPPPAALLERVERIGFRVTHAYGLTEATGPALACEWRAQWDRLPLPER 352
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A LK+RQGV + L + D+ D +T SV RDG+T GEIV+RG S+M GYL +PEA S
Sbjct: 353 ARLKSRQGVSVLSLADADVKDAKTMASVPRDGKTVGEIVLRGSSIMKGYLNNPEANSDAF 412
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
K + TGDVG++H DGY+EIKDRSKDVIISGGENI S E+E VL+ HP V +AAVV P
Sbjct: 413 KGEWFLTGDVGVVHADGYIEIKDRSKDVIISGGENICSKEVEEVLFQHPAVADAAVVAMP 472
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
P W E PCAFV + E D++ +CR + R+MVPK VV D +P+ GK
Sbjct: 473 HPHWGETPCAFVVARDKAAG----VCEDDVVAFCRKHMARFMVPKKVVVYDAIPRNGNGK 528
Query: 539 VQKYVLGDIANSMS 552
V+K +L + A ++
Sbjct: 529 VEKNLLREAAKKLA 542
>gi|326515982|dbj|BAJ88014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 567
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/556 (48%), Positives = 364/556 (65%), Gaps = 20/556 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ L AN PL+P+ F+ RAA D S+I T +TW QT+ RC++L+++L + G
Sbjct: 1 MESLPKRDANHVPLSPVTFLPRAAAVYADRTSVICGGTAFTWRQTHDRCVRLSAALQALG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH- 119
+ VVSV+APN PA+YE+HFAVPM+G + N INTRLDA ++ IL+H+ KL+F+D+
Sbjct: 61 VARNDVVSVLAPNTPALYEMHFAVPMAGGVVNAINTRLDAAGVATILRHAAPKLLFIDYQ 120
Query: 120 ---LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG 176
+++ L ++ P L+++ DD E + + R+ + YE ++A+G
Sbjct: 121 YIRVATDALKSMMDTALP------LLVVIDDIEAPTGA----RLGELE----YEGLVARG 166
Query: 177 DPQFSWVRPKSD-LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLW 235
DP R D D + LNYT GTTSAPKGVV ++ ++ V L+ W V + V LW
Sbjct: 167 DPGRHPPREVVDEWDAVALNYTSGTTSAPKGVVYSHRGAYLSTVGLLLQWGVGHEPVYLW 226
Query: 236 TLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP 295
+LPMFH NGW+FTWG A G NVC+R A +++ I HGVTHMC AP++ N+L ++
Sbjct: 227 SLPMFHCNGWTFTWGIAARGGANVCVRAPTADAMYSAITDHGVTHMCVAPVLFNVLLNA- 285
Query: 296 EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
L R V +LT G+PPPA +L R E LGF V+H YG TE G + C W+ +W+ LPA
Sbjct: 286 HRDPLPRAVEVLTGGAPPPAALLERVERLGFHVTHAYGMTEATGPAMVCEWRERWDALPA 345
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
ERA+LKARQGV I L D+ D +T +SV RDG T GEIV+RG S+M GY K+PEAT
Sbjct: 346 PERAALKARQGVSAISLAGADVKDLKTMVSVPRDGTTLGEIVLRGSSVMKGYYKNPEATD 405
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
+ G + TGDVG++HPDGY+EIKDRSKDVIISGGENISS E+E+ LY HP V EAAVV
Sbjct: 406 AAFRGGWFLTGDVGVVHPDGYVEIKDRSKDVIISGGENISSVEVEAALYGHPAVQEAAVV 465
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
P P W E+PCAFV+LK DSG E++++ +CR+++ +MVP VVF+DELPK A
Sbjct: 466 AMPHPHWGEVPCAFVTLKKEFDSGAGEVNEEELVAFCRSKMAHFMVPGKVVFVDELPKNA 525
Query: 536 TGKVQKYVLGDIANSM 551
TGKVQK L + A +
Sbjct: 526 TGKVQKLALRERARGL 541
>gi|356497397|ref|XP_003517547.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
Length = 553
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 276/551 (50%), Positives = 373/551 (67%), Gaps = 25/551 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPG--HV 66
AN PLTP+ F+ERAA S+I D TYTW+QT++RC++LASS+S G+ HV
Sbjct: 9 ANYVPLTPISFLERAALVYRHRLSLISGDVTYTWTQTHQRCIRLASSISQLGVGLSLRHV 68
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----HLSS 122
V+V+APN+PAMYELHFAVPMSGA+ T+NTR D+ +S++LKHSE+KL+FVD H++
Sbjct: 69 VAVLAPNVPAMYELHFAVPMSGAVLCTLNTRHDSTMVSLLLKHSEAKLLFVDYQFLHIAQ 128
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
L +++S +K P LVLI S P P P A YE+++AKG+ QF
Sbjct: 129 GAL-QILS--KTTTKIPHLVLI------SECGHPLP--PHAKGTLIYEDLVAKGNLQFVV 177
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
RPK + DP+ LNYT GTTS PKGV+ ++ ++ ++ +++ + + LW +PMFH
Sbjct: 178 RRPKDEWDPISLNYTSGTTSNPKGVIYSHRGAYLNSLATVLLNEMRSMPLYLWCVPMFHC 237
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL-SSSPEAKQ-L 300
NGW W A G TNVC R A +F I KH VTHM GAP VLN++ +SSP+ ++ L
Sbjct: 238 NGWCLPWAIAAQGGTNVCQRSVTAEGIFDNIFKHKVTHMGGAPTVLNMIINSSPKVQKPL 297
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
V+++T G+PPP V+ R E LGF V+H YG TE G C WKP+W+ LP +A
Sbjct: 298 PGKVQVMTGGAPPPPDVIFRMEELGFNVTHSYGLTETFGPASICTWKPEWDNLPQDAQAK 357
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
LKARQGV +G+ +D+ DP T SV D +T GE++ RG ++M GYLKD +AT + K
Sbjct: 358 LKARQGVAHVGMEGLDVKDPHTMKSVPADAKTMGEVMFRGNTVMNGYLKDLKATQEAFKG 417
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+G+ HPDGY+E+KDRSKD+IISGGENIS+ E+E V++SHP V EAAVVGRPD
Sbjct: 418 GWFWTGDLGVKHPDGYIELKDRSKDIIISGGENISTIELEGVIFSHPAVFEAAVVGRPDD 477
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
+W E PCAFV LK G + T ++IIQ+C+ R+PR+M P+TVVF D LPKT+TGK Q
Sbjct: 478 YWGETPCAFVKLKEGCSA-----TSEEIIQFCQNRLPRFMAPRTVVFTD-LPKTSTGKTQ 531
Query: 541 KYVLGDIANSM 551
K+VL + A +M
Sbjct: 532 KFVLREKAKAM 542
>gi|115450503|ref|NP_001048852.1| Os03g0130100 [Oryza sativa Japonica Group]
gi|6063549|dbj|BAA85409.1| unnamed protein product [Oryza sativa Japonica Group]
gi|108706001|gb|ABF93796.1| acyl-activating enzyme 11, putative, expressed [Oryza sativa
Japonica Group]
gi|113547323|dbj|BAF10766.1| Os03g0130100 [Oryza sativa Japonica Group]
gi|125584795|gb|EAZ25459.1| hypothetical protein OsJ_09281 [Oryza sativa Japonica Group]
gi|215766808|dbj|BAG99036.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 578
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 267/554 (48%), Positives = 356/554 (64%), Gaps = 14/554 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M++L PAN PL+P+GF+ RA D S+IY +TWSQTY RC +LASSL S G
Sbjct: 1 MEQLPKRPANYVPLSPVGFLPRANAVYGDRTSVIYGRVRFTWSQTYARCRRLASSLLSLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ VVSV+APN+PAMYE+HFAVPM+GA+ NTINTRLDAR ++ IL+HSE+K+ FVD+
Sbjct: 61 VRNHDVVSVLAPNVPAMYEMHFAVPMAGAVLNTINTRLDARAVAGILRHSEAKVFFVDYQ 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
L + + + + LV + DD ++ P + + YE ++A+GDP
Sbjct: 121 YVRLASDALQIVADEGRHVPLVAVIDDIDV------PTGVRLGEL--EYEGLVARGDPAA 172
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+ D + LNYT GTTSAPKGVV ++ ++ + L+ WVV + V LWTLPMF
Sbjct: 173 ELPSLADEWDAVTLNYTSGTTSAPKGVVYSHRGAYLSTMSLLMSWVVGDEPVYLWTLPMF 232
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--K 298
H NGW+FTWG A G NVC+R A ++ I +HGVTH+C AP+V N+L EA K
Sbjct: 233 HCNGWTFTWGMAARGGVNVCIRDARAADIYRAIARHGVTHLCCAPVVFNILLEGGEAAAK 292
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
QL PV +LT G+PPPA +L R E +GF V+H YG TE G ++C W+ +W++LP ER
Sbjct: 293 QLAAPVHVLTGGAPPPAALLERVERIGFRVTHAYGLTEATGPALACEWRAQWDRLPLPER 352
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A LK+RQGV + L + D+ D +T V RDG+T GEIV+RG S+M GYL +PEA S
Sbjct: 353 ARLKSRQGVSVLSLADADVKDAKTMARVPRDGKTVGEIVLRGSSIMKGYLNNPEANSDAF 412
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
K + TGDVG++H DGY+EIKDRSKDVIISGGENI S E+E VL+ HP V +AAVV P
Sbjct: 413 KGEWFLTGDVGVVHADGYIEIKDRSKDVIISGGENICSKEVEEVLFQHPAVADAAVVAMP 472
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
P W E PCAFV + E D++ +CR + R+MVPK VV D +P+ GK
Sbjct: 473 HPHWGETPCAFVVARDKAAG----VCEDDVVAFCRKHMARFMVPKKVVVYDAIPRNGNGK 528
Query: 539 VQKYVLGDIANSMS 552
V+K +L + A ++
Sbjct: 529 VEKNLLREAAKKLA 542
>gi|224086034|ref|XP_002307787.1| predicted protein [Populus trichocarpa]
gi|222857236|gb|EEE94783.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 268/556 (48%), Positives = 368/556 (66%), Gaps = 21/556 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ + AN PLTP+ F+ER+A D S+ Y D YTW +T+ RC++LAS+L+ G
Sbjct: 1 MEGMVKCSANYVPLTPISFLERSAIVYRDRVSVAYGDIKYTWKETHERCVRLASALAHLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I+PG VV+ +APNIPAMYELHF VPM+GA+ T+N R D+ +S++LKHSE+KL+FVD+
Sbjct: 61 ISPGDVVAALAPNIPAMYELHFGVPMAGAVLCTLNVRHDSSMVSVLLKHSEAKLIFVDYQ 120
Query: 121 S---SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD 177
+ LE++S +K P LVLI + + ++ SSP + YE++L KG
Sbjct: 121 CLPIAQGALEILS--ERKTKLPLLVLIPECGQPAAISSPR--------ILEYESLLEKGK 170
Query: 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
F RP+ + DP+ LNYT GTTS+PKGV+ ++ ++ ++ + + + V LW +
Sbjct: 171 LDFEVRRPRDEWDPISLNYTSGTTSSPKGVIYSHRGAYLNSLAAALLNDMSAMPVYLWCV 230
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSP 295
PMFH NGW TW A G TNVC R A +F I +H VTHM GAP VLN++ +S+
Sbjct: 231 PMFHCNGWCLTWAVAAQGGTNVCQRYVTARDIFENIAQHKVTHMSGAPTVLNMIINASAS 290
Query: 296 EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
E + L V ++T G+PPP+ VL + E LGF V+H YG TE G CAWKP+W L
Sbjct: 291 EKRPLPGKVAVMTGGAPPPSHVLFKMEELGFHVTHSYGLTETYGPGTVCAWKPEWASLTP 350
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
+A +K+RQGV+ +GL E+DI DP T SV D +T GE++ RG ++M GYLK+ EAT
Sbjct: 351 EAQAKIKSRQGVQHLGLEELDIKDPVTMKSVPADAKTMGEVMFRGNTVMNGYLKNLEATK 410
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
G + +GD+G+ HPDGY+E+KDRSKD+IISGGENISS E+ES L+SHP V EAA+V
Sbjct: 411 DAFSGGWFRSGDLGVKHPDGYIELKDRSKDIIISGGENISSIEVESALFSHPAVLEAAIV 470
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
GRPD +W E PCAFV LK G ++ +++I++CR +P YM P+TVVF ELPKT+
Sbjct: 471 GRPDDYWGETPCAFVKLKEGCNANA-----EELIKFCRDHLPHYMTPRTVVF-QELPKTS 524
Query: 536 TGKVQKYVLGDIANSM 551
TGKVQKYVL + A +M
Sbjct: 525 TGKVQKYVLKEKAKAM 540
>gi|168049860|ref|XP_001777379.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671228|gb|EDQ57783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 561
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 261/549 (47%), Positives = 360/549 (65%), Gaps = 12/549 (2%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTPLGF+ER+A S+IY D YTW+QTY RC ++AS+L G++ G +VS
Sbjct: 8 ANYTPLTPLGFLERSAFVYGSRTSVIYGDVRYTWAQTYERCRRMASALVKRGLSRGDIVS 67
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
V+APN+P +YE HF VPM+G + N IN RLDAR + L+HS++K + VD L+ E
Sbjct: 68 VVAPNVPCIYEAHFGVPMAGMVLNAINIRLDARMTAFFLEHSKTKALIVDEEFFPLIDEA 127
Query: 129 VSLFPPHSKTPKLVLITDDKE----ISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
+ + + ++ L+ +E I A YE+ L++GDP F W
Sbjct: 128 LGILSSKLGSIEMPLLVVAEEGQGGIDRQKHGGFAAALARGAIEYESFLSEGDPAFVWAP 187
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
P + D + L YT GTTS+PKGV+ ++ ++ A+ +L+ W VP +V LWTLP+FH NG
Sbjct: 188 PADEWDSIALGYTSGTTSSPKGVLLSHRGAYVAALSNLLVWEVPIGAVYLWTLPLFHCNG 247
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDR 302
W ++WG A TNVCLR A ++ IRK+GVTH CGAP+VLN+L +SP E +
Sbjct: 248 WCYSWGIAAHAGTNVCLRHVTATGIYNAIRKYGVTHFCGAPVVLNMLINSPVSERAPMSH 307
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
+ ++TAG+ PPA VL + E GF V+H YG TE G + CAWKP+W+ LP +RA L
Sbjct: 308 TIHVMTAGAAPPAIVLSKMEEQGFRVTHTYGLTETFGPSTICAWKPEWDSLPVADRARLN 367
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
+RQGVR +GL +D+VD ++ + V DG T GE+VMRG +M GYL +P+AT + + G
Sbjct: 368 SRQGVRYVGLEGLDVVDLKSMVPVPADGATLGEVVMRGNMVMKGYLNNPKATEESFQGGW 427
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
Y++GD+ + HPDGY+EIKDR+KD+IISGGENISS E+ES+LY HP + EA+VV RPD W
Sbjct: 428 YHSGDIAVKHPDGYIEIKDRAKDIIISGGENISSLEVESILYRHPGILEASVVARPDEQW 487
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E PCAF+ T +G + TE D+IQ+CR +P YMVP++VVF LPKTATGK+QK+
Sbjct: 488 GETPCAFI-----TPNGKVPITEADVIQFCRKELPHYMVPRSVVF-GPLPKTATGKIQKH 541
Query: 543 VLGDIANSM 551
VL A ++
Sbjct: 542 VLRTKAKAL 550
>gi|356539777|ref|XP_003538370.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
Length = 620
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 277/591 (46%), Positives = 373/591 (63%), Gaps = 37/591 (6%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD L+ AN LTPL F+ RAA + S+I+ T +TW+QTY RC +LA SL +
Sbjct: 1 MDNLQKCKANYTALTPLTFLMRAAACYANRTSVIHEGTHFTWAQTYERCCRLAFSLRALN 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ VVSV+APNIPAMYE+HFAVPM+GA+ NTINTRLDA+ I+ IL+HSE+K+ FVD+
Sbjct: 61 VARNDVVSVLAPNIPAMYEMHFAVPMAGAVLNTINTRLDAKNIATILRHSEAKVFFVDYE 120
Query: 121 SSSLLLEVVSLF------PPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT------ 168
S + + L + PK I +S+ P + D ++T
Sbjct: 121 YVSKAKDALRLLMDNNNNNNNKGVPKPTTINQQ----NSTFSLPLVIVIDDINTPTGIRL 176
Query: 169 ----YENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLID 224
YE M+ G+P + + + P+ LNYT GTTS PKGVV ++ ++ + ++
Sbjct: 177 GELEYEQMVHHGNPNYVPEEIQDEWTPIALNYTSGTTSEPKGVVYSHRGAYLSTLSLILG 236
Query: 225 WVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGA 284
W + + V LWTLPMFH NGW+FTWG A G TNVCLR A +++ I H VTHMC A
Sbjct: 237 WEMGSEPVYLWTLPMFHCNGWTFTWGLAARGGTNVCLRTTAARDIYSNIVLHNVTHMCCA 296
Query: 285 PIVLNLLSSSPEAKQLD------RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIA 338
PIV N++ + +++++D PV ILT G+PPPA +L + ESLGF V+H YG TE
Sbjct: 297 PIVFNIILEAKQSEKIDIKLKRNSPVEILTGGAPPPASLLEQIESLGFHVTHAYGLTEAT 356
Query: 339 GVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVM 398
G + C W+ +WN LP +E+A LKARQGV + + VD+ + +T SV +DG+T GEIV+
Sbjct: 357 GPALVCEWQKEWNMLPKKEQAQLKARQGVSVLTMAGVDVKNLDTMESVPKDGRTMGEIVL 416
Query: 399 RGGSLMLGYLKDPEATSKCM------KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGE 452
+G +M+GY KD EATSK K + TGDVG++HPDGYLEIKDRSKDVIISGGE
Sbjct: 417 KGSGIMMGYFKDHEATSKAFFGSNNSKGDWFRTGDVGVIHPDGYLEIKDRSKDVIISGGE 476
Query: 453 NISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMM-----TTEKD 507
NISS E+ES+LY HP V EAAVV P P W E PCAFVSL+ ++ TE +
Sbjct: 477 NISSVEVESLLYRHPRVLEAAVVAMPHPRWGESPCAFVSLRKNNNNNNSSKKIDHVTEAE 536
Query: 508 IIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMSMSHSRM 558
II YCR +P +MVPK V F++ELPKT+TGK+QK+ L +A + +S + +
Sbjct: 537 IIAYCRKNLPHFMVPKVVKFMEELPKTSTGKIQKFELRVMAKAFMVSENNV 587
>gi|168000891|ref|XP_001753149.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695848|gb|EDQ82190.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 557
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 262/551 (47%), Positives = 365/551 (66%), Gaps = 11/551 (1%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTP+ F+ER+A+ + SIIY D +TW QT RC LAS ++ ++ G VS
Sbjct: 8 ANYAPLTPILFLERSASVYPERTSIIYGDLRFTWKQTMERCRCLASKVAQL-VSAGQTVS 66
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
V++PN PA+YEL+F VPM+ A+ N+IN+RLDAR IS++L HSE+K++F D ++ E
Sbjct: 67 VLSPNSPAVYELNFGVPMARAVLNSINSRLDARMISVLLSHSETKVLFADSQHLQVVQEA 126
Query: 129 VSLFPPHSKTPK---LVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRP 185
+ ++ S P +++ +D+ + S + +P + YE LA GDP F P
Sbjct: 127 LRMWLSSSDAPAEKPQIIVIEDRLDAGSYNFQTFLPGWGELVEYEEFLASGDPSFPIQWP 186
Query: 186 KSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGW 245
D + +VLNYT GTTS PKGV+ ++ ++ + ++ W + +SV LWTLPMFH NGW
Sbjct: 187 LDDWETIVLNYTSGTTSRPKGVLYHHRGAYLAPLITVQFWGMQDESVYLWTLPMFHCNGW 246
Query: 246 SFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVR 305
+F WG A + TNV +R +A ++ I KH VTH+CGAP+V N ++++P + P R
Sbjct: 247 TFIWGMAAIAGTNVIIRNVEAKAIYDSIVKHKVTHLCGAPVVFNTIANAPPQDKKKLPGR 306
Query: 306 I--LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
+ +T G+PPP VL ES+GF V H YG TE G + C WKP+WN L A ERA +KA
Sbjct: 307 VFTITGGAPPPPSVLSNMESMGFTVLHSYGLTETYGPALVCVWKPEWNGLSAEERARIKA 366
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQGV T+GL +D++DP+T +V RD +T GEI++RG ++M GY KD +AT K + G Y
Sbjct: 367 RQGVATVGLQGLDVLDPDTMKAVPRDAKTIGEIMIRGHTVMKGYFKDEDATRKAFEGGWY 426
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
+TGD+G+MHPDGY+E+KDRSKD+IISGGENISS E+ESVL+ HP + EAAVV RPD W
Sbjct: 427 HTGDLGVMHPDGYVEVKDRSKDIIISGGENISSIEVESVLFKHPQIMEAAVVARPDKHWG 486
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E PCAFV+L+ G M I+ YCR +P++ VPKT+VF ELPKT TGKVQK+
Sbjct: 487 ESPCAFVTLR----EGAMGVNADTIVAYCREHLPKFYVPKTIVFC-ELPKTTTGKVQKFK 541
Query: 544 LGDIANSMSMS 554
L ++A ++ S
Sbjct: 542 LREMAKALPQS 552
>gi|449455718|ref|XP_004145598.1| PREDICTED: probable acyl-activating enzyme 1, peroxisomal-like
[Cucumis sativus]
gi|449512688|ref|XP_004164116.1| PREDICTED: probable acyl-activating enzyme 1, peroxisomal-like
[Cucumis sativus]
Length = 559
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 259/548 (47%), Positives = 368/548 (67%), Gaps = 13/548 (2%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
ANS PLTP+ F+ERAA D S++Y + +TW +T +RC + AS+L GI+ G VV+
Sbjct: 8 ANSVPLTPITFLERAAAVFGDRISLVYGNVRFTWRETLQRCTKFASALVHVGISRGDVVA 67
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL--- 125
V+APN+PA YELHFAVPM+GAI T+N R DA +S +L HSE+K++ DH ++
Sbjct: 68 VLAPNVPATYELHFAVPMAGAILCTLNMRHDAAMVSTLLGHSEAKIIVADHQYLHIVKAA 127
Query: 126 LEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRP 185
+E++S + P++V++ +E SS A YE++L G F RP
Sbjct: 128 IEIMSKTMAAEELPRIVIV---QEFDHPSSNINGFDSASDDLEYESLLNTGTLDFEIRRP 184
Query: 186 KSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGW 245
+ DP+ LNYT GTTS PKGV+ ++ ++ + +++ + +V LWT+PMFH NGW
Sbjct: 185 IDERDPISLNYTSGTTSRPKGVIYSHRGTYLNTLSTVLLNDMSSMAVYLWTVPMFHCNGW 244
Query: 246 SFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRP 303
S TWG A G TN+C R +A +FA I H VTHM GAP VLN++ ++P E K L
Sbjct: 245 SMTWGVAAQGGTNICQRNVNAKEIFANISLHNVTHMGGAPTVLNMIVNAPITEQKPLLGK 304
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
V ++T G+PPP+ +L + LGF++ H YG TE GV C WKP+W+ LP ++A LK+
Sbjct: 305 VTVMTGGAPPPSNILYKMRELGFLIVHCYGLTETYGVATFCHWKPEWDSLPDEKQAKLKS 364
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQG++ IG+ VDI +P T SV DG+T GE+++RG ++M+GYLKD +AT + G +
Sbjct: 365 RQGMQHIGVEGVDIKNPITMESVPADGKTMGEVMIRGNTVMIGYLKDVKATEEAFNGGWF 424
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
+GD+G+ HPDGY+E+KDRSKD+IISGGENIS+ E+ESVL++HP V EAA+VGRPD W
Sbjct: 425 RSGDLGVRHPDGYIELKDRSKDIIISGGENISTIEVESVLFNHPSVLEAAIVGRPDDHWG 484
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E PCAFV+LK G+++ TE++II++CR +P YM PKTVVF +LPK++TGK+QK +
Sbjct: 485 ETPCAFVNLKHGSNA-----TEEEIIKFCRDNLPHYMAPKTVVFKSDLPKSSTGKIQKLI 539
Query: 544 LGDIANSM 551
L + A +M
Sbjct: 540 LKEEAKAM 547
>gi|302821919|ref|XP_002992620.1| hypothetical protein SELMODRAFT_236556 [Selaginella moellendorffii]
gi|300139584|gb|EFJ06322.1| hypothetical protein SELMODRAFT_236556 [Selaginella moellendorffii]
Length = 552
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 271/552 (49%), Positives = 362/552 (65%), Gaps = 20/552 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLS-SFGINPGHVV 67
AN PL+PL F+ R+A D S+I+ + +TWSQT RC +LAS++S G+NPG VV
Sbjct: 3 ANHAPLSPLSFLYRSAAVFGDKTSLIHGASCFTWSQTLDRCRRLASAISLRLGVNPGAVV 62
Query: 68 -----SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
SV+APN+ A+YE+HF VPM GAI NTIN RLDARTI+++L H++S+ VFVD
Sbjct: 63 CEIPVSVVAPNVAAIYEMHFGVPMVGAILNTINFRLDARTIALLLDHAQSRAVFVDSEFF 122
Query: 123 SLLLEVVSLFPPHSK-TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
L+ + + L SK P+LVLI D S + I YE +L F
Sbjct: 123 PLVTQALQLLAESSKPLPQLVLIKDKSYTSQVAHSYGGIL------EYEELLENSSQDFP 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
V P + + LNYT GTTS PKGV+ ++ ++ ++ S++ W + V LWTLPMFH
Sbjct: 177 LVFPDDEEQSIALNYTSGTTSRPKGVLYTHRGAYLNSIASILLWEMGPFPVYLWTLPMFH 236
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD 301
NGW FTW A G TN+CLR + F I + VTH+ GAP VLN+++SS +++ D
Sbjct: 237 CNGWCFTWAIAAQGGTNICLRNVTSKATFDAIAESSVTHLSGAPTVLNMIASSIPSERRD 296
Query: 302 RP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
P V + G+PPP +L E LGF+V+H YG TE G + CAW+P WN P ERA
Sbjct: 297 LPDKVAVRVGGAPPPPAILSSMEELGFVVTHSYGLTETYGPALFCAWRPHWNSFPLEERA 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LK+RQGV +GL + D+ DP T SV RDG+T GE+++RG ++M GY +D EAT +
Sbjct: 357 KLKSRQGVVHLGLHQADVKDPATMESVARDGRTLGEVMVRGSTVMKGYHRDDEATRAAFQ 416
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+G++HPDGY++++DRSKD+IISGGENISS E+ESVLY HP V EAAVV RPD
Sbjct: 417 GGWFHTGDLGVIHPDGYIQLRDRSKDIIISGGENISSIEVESVLYGHPEVLEAAVVARPD 476
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
FW E PCAFV+LK SGG T+ ++II YCRAR+P +M P++VVF LPKT+TGKV
Sbjct: 477 DFWGETPCAFVTLKR---SGG-ATSAREIIDYCRARLPHFMNPRSVVF-GALPKTSTGKV 531
Query: 540 QKYVLGDIANSM 551
QK++L D A +M
Sbjct: 532 QKFLLRDRARAM 543
>gi|357159975|ref|XP_003578618.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Brachypodium
distachyon]
Length = 572
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 266/559 (47%), Positives = 357/559 (63%), Gaps = 19/559 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD L N PL+P+ F+ RAA D S+I T++TW QT+ RCL+LA+SL +
Sbjct: 1 MDSLPKRDGNYVPLSPVTFLPRAAAVYADRTSVICGATSFTWRQTHARCLRLAASLQALA 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
++ VVSV+APN PA+YE+HFAVPM+G + N INTRLDA ++ I+KH++ KL+FVD+
Sbjct: 61 VSKNDVVSVLAPNTPALYEMHFAVPMAGGVLNAINTRLDASGVAAIVKHADPKLLFVDYQ 120
Query: 121 SSSLLLEVVSLFPPHSKT-------PKLVLITDDKEISSSSSPPPRIPPADFVDTYENML 173
L + +S + + P LV+I D + P + + YE ++
Sbjct: 121 YIRLATDALSSILAAADSTGTAAALPLLVVIDDIEN-------PTGLRVGEL--EYEQLV 171
Query: 174 AKGDPQFSWVRPKSD-LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSV 232
A+GDP RP D D + LNYT GTTS+PKGVV ++ ++ V L+ W V + V
Sbjct: 172 ARGDPAQHPPRPVEDEWDAVALNYTSGTTSSPKGVVYSHRGAYLSTVGLLLQWGVAHEPV 231
Query: 233 LLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLS 292
LW+LPMFH NGW+FTWG A G NVC+R A +++ + HGVTHMC AP++ N+L
Sbjct: 232 FLWSLPMFHCNGWTFTWGVAARGGANVCVRAPTAQAMYSAVVAHGVTHMCAAPVLFNVLL 291
Query: 293 SSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNK 352
L R V +LT G+PPPA +L R E LGF V+H YG TE G + C W+ +W+
Sbjct: 292 DDAPPAPLPRRVEVLTGGAPPPAALLERVEKLGFHVTHAYGMTEATGPAMVCEWRERWDA 351
Query: 353 LPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPE 412
LP ERA LKARQGV + L + D +T SV RDG T GEIV+RG S+M GY KDP+
Sbjct: 352 LPPPERALLKARQGVSALSLAGAGVKDLQTMASVPRDGATMGEIVLRGSSVMKGYYKDPK 411
Query: 413 ATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEA 472
AT+ + G + TGDVG++HPDGY+EIKDRSKDVIISGGENISS E+E+ LY HP V EA
Sbjct: 412 ATAAAFRAGWFLTGDVGVVHPDGYVEIKDRSKDVIISGGENISSVEVEAALYGHPAVREA 471
Query: 473 AVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELP 532
AVV P W E PCAFV+LK +G + +E++++ +CR ++ +MVP+ VVF+DELP
Sbjct: 472 AVVAMPHRHWGETPCAFVALKKEFSAGEV--SEEEVVSFCRNKMAHFMVPRKVVFMDELP 529
Query: 533 KTATGKVQKYVLGDIANSM 551
K ATGKVQK L + A +
Sbjct: 530 KNATGKVQKLALRERARGL 548
>gi|357120861|ref|XP_003562143.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Brachypodium
distachyon]
Length = 613
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 265/562 (47%), Positives = 362/562 (64%), Gaps = 19/562 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTT-YTWSQTYRRCLQLASSLSSF 59
M++L AN PL+P+GF+ RA D S++Y +TWSQT+ RC +LASSL +
Sbjct: 32 MEQLPKRAANYVPLSPVGFLPRANAVYGDRTSLVYGRRVRFTWSQTHDRCRRLASSLLAL 91
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
G+ VVSV+APN+PAMYE+HFAVPM+GA+ NT+NTRLDA+ ++ IL+HSE+KL FVD+
Sbjct: 92 GVRKNDVVSVLAPNVPAMYEMHFAVPMAGAVLNTVNTRLDAKAVAAILRHSEAKLFFVDY 151
Query: 120 LSSSLLLEVVSLFPPH--SKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD 177
L + + L S+ P LV + DD + P + + YE ++++GD
Sbjct: 152 EYVRLASDALQLLVSDGASQVP-LVAVIDDLD------RPTGVRLGEL--EYEGLVSRGD 202
Query: 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
P + D + LNYT GTTSAPKGVV ++ ++ L+ W + + V LWTL
Sbjct: 203 PTVQLPMLADEWDAVTLNYTSGTTSAPKGVVYSHRGAYLSTTSLLMSWEMGAEPVYLWTL 262
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL------ 291
PMFH NGW+FTWG A G NVC+R A V+ I +HGVTHMC AP+V N+L
Sbjct: 263 PMFHCNGWTFTWGVAARGGVNVCIRDARAADVYGAIARHGVTHMCCAPVVFNILLEGAAA 322
Query: 292 SSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWN 351
+S+P +QL PV +LT G+PPPA +L R E +GF V+H YG TE G ++C W+ +W+
Sbjct: 323 TSAPNQRQLAAPVHVLTGGAPPPAALLERVERIGFHVTHAYGLTEATGPALACEWRAQWD 382
Query: 352 KLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDP 411
LP +RA LKARQGV + L + D+++ +T SV+RDG+ GEIV+RG S+M GYLK+P
Sbjct: 383 HLPVSDRARLKARQGVSVLSLADADVINEDTMSSVQRDGKALGEIVLRGSSVMKGYLKNP 442
Query: 412 EATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNE 471
EA K G + TGDVG++HPDGY+EIKDRSKDVIISGGENI S E+E L++HP V +
Sbjct: 443 EANEAAFKGGWFMTGDVGVVHPDGYIEIKDRSKDVIISGGENICSKEVEEALFAHPAVAD 502
Query: 472 AAVVGRPDPFWQEIPCAFVSLKTGTDSG-GMMTTEKDIIQYCRARIPRYMVPKTVVFIDE 530
AAVV P P W E PCAFV + D + E++++ +CR R+ R+MVP+ VV +
Sbjct: 503 AAVVAMPHPHWGETPCAFVVPRKKEDGDQNVQVCEEEVVDFCRKRMARFMVPRKVVLCEA 562
Query: 531 LPKTATGKVQKYVLGDIANSMS 552
LP+ A GKV+K L D A +
Sbjct: 563 LPRNALGKVEKVKLRDAARKLQ 584
>gi|56695582|ref|YP_165932.1| acyl-CoA synthetase [Ruegeria pomeroyi DSS-3]
gi|56677319|gb|AAV93985.1| AMP-binding protein [Ruegeria pomeroyi DSS-3]
Length = 542
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 257/550 (46%), Positives = 356/550 (64%), Gaps = 18/550 (3%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L PAN PL+PL +IER A D PS++Y D YTW++TY RC +LAS+L+ G+
Sbjct: 10 HLDRTPANFTPLSPLSYIERTAAVYPDYPSVVYGDRRYTWAETYTRCRRLASALAGRGLG 69
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G VS+IA NIP MYE HF VPM+GA+ N INTRLDA I+ IL H+E++++ VD S
Sbjct: 70 KGDTVSIIAANIPEMYEAHFGVPMAGAVLNAINTRLDAPIIAFILSHAEARVLIVDPEFS 129
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ + ++ P L+++ + + +P + +Y+ +LA+GDP F W
Sbjct: 130 EVVRDALAQI----DRPDLLVVDIEDPSFAGGAPVGTL-------SYDALLAEGDPDFDW 178
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P + D + LNYT GTT PKGVV ++ + A +++ W +P+ +V LWTLPMFH
Sbjct: 179 SLPGDEWDAIALNYTSGTTGNPKGVVYHHRGAALNATSNILTWGMPQHAVYLWTLPMFHC 238
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE-AKQLD 301
NGW F W A +VCLR ++ R+ VTH CGAPIVLN+L+++P+ K D
Sbjct: 239 NGWCFPWTMAANAGVSVCLRAVRDEPIYRAFREEKVTHFCGAPIVLNMLANAPDHMKDFD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
++++TAG+PPPA V+ + E++G V+H YG TE G +V CAWK +W+ P ERA+L
Sbjct: 299 HQIKVMTAGAPPPAAVIEKMEAMGVDVTHVYGLTETYGPSVVCAWKEEWDGRPGAERAAL 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K RQGVR + L+ + + DPET V DG+T GEI M+G +M GYLK+P+AT + + G
Sbjct: 359 KVRQGVRYVALSGLMVADPETLEPVPADGETMGEIFMQGNIVMKGYLKNPDATDRAFRGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GD+G+MHPDGY+ +KDRSKD+IISGGENISS E+E VLY HP V EAAVV RPD
Sbjct: 419 WFASGDLGVMHPDGYIALKDRSKDIIISGGENISSVEVEDVLYKHPAVMEAAVVARPDEK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK G D+I +CRA + + PKTVVF ELPKT+TGK+QK
Sbjct: 479 WGETPCAFVELKPGQS-----VEAADLIAHCRANMAHFKAPKTVVF-GELPKTSTGKIQK 532
Query: 542 YVLGDIANSM 551
++L + A ++
Sbjct: 533 FLLRERARAL 542
>gi|328542157|ref|YP_004302266.1| AMP-dependent synthetase/ligase [Polymorphum gilvum SL003B-26A1]
gi|326411907|gb|ADZ68970.1| AMP-dependent synthetase and ligase [Polymorphum gilvum
SL003B-26A1]
Length = 549
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 271/552 (49%), Positives = 349/552 (63%), Gaps = 16/552 (2%)
Query: 1 MDR-LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSF 59
DR L AN LTPL FI R A D ++++ TW++TY R +LAS+L++
Sbjct: 8 FDRDLDACAANHVALTPLSFIARTAAIYPDHVAVVHGPVRRTWAETYARTRRLASALAAR 67
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
G+ G V+VIA NIP M+E HF VPM GA+ NTINTRLDA I+ IL H E+K V VD
Sbjct: 68 GLGRGDTVAVIAANIPEMFEAHFGVPMIGAVLNTINTRLDAAAIAFILDHGEAKAVLVDP 127
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ L + L S +LV+ +D + S P TYE +LA+GDP
Sbjct: 128 EFADLARAALEL---TSDPDRLVVDIEDVMVEGGSRPRAG------ALTYEALLAEGDPD 178
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F+W P S+ D + LNYT GTT PKGVV ++ + A+ + W +P SV LWTLPM
Sbjct: 179 FAWTCPSSEWDAITLNYTSGTTGNPKGVVYHHRGAHLNALSQIQTWNMPAHSVYLWTLPM 238
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A T+VCLR A +F LI VTH CGAPIVLN+L+ + K
Sbjct: 239 FHCNGWCFPWAIAANAGTSVCLRAVRAEPIFELIAAERVTHFCGAPIVLNMLAQNAALKT 298
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
D V+++TAG+ PPA V+ E++G V+H YG TE+ G V CAWK +W+ LPA RA
Sbjct: 299 FDHDVKVMTAGASPPAAVIEAMEAMGVEVTHVYGLTEVFGPAVVCAWKSEWDALPADRRA 358
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKARQGV+ L E+ + DP T V DG+T GEI MRG ++M GYLK+P AT++ +
Sbjct: 359 RLKARQGVKNTALAELMVADPGTLKPVPPDGRTIGEIFMRGNNVMRGYLKNPAATAEAFR 418
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G + +GD+G+MHPDGY+E+KDRSKD+IISGGENISS E+E VLY HP V EAAVV RPD
Sbjct: 419 GGWFASGDLGVMHPDGYVELKDRSKDIIISGGENISSVEVEDVLYRHPAVLEAAVVARPD 478
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
P W E PCAFV LK G + +E DII +CRA + + P+TVVF LPKT+TGK+
Sbjct: 479 PKWGESPCAFVELKPGRAA-----SESDIIAFCRAHMAHFKAPRTVVF-GALPKTSTGKI 532
Query: 540 QKYVLGDIANSM 551
QK+VL D A ++
Sbjct: 533 QKFVLRDAARTL 544
>gi|29893229|gb|AAP03023.1| acyl-activating enzyme 12 [Arabidopsis thaliana]
Length = 578
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 263/562 (46%), Positives = 359/562 (63%), Gaps = 18/562 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD L AN+ PLTP+ F++RA+ + SIIY T +TW QTY RC +LA+SL S
Sbjct: 1 MDNLALCEANNVPLTPITFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLISLN 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I VVSV+APN PAMYE+HFAVPM+GA+ N INTRLDA +I+ IL+H++ K++F+D
Sbjct: 61 IGKNDVVSVVAPNTPAMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFIDRS 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
L E++ L L +I P R+ + YE ++ +G+P
Sbjct: 121 FEPLAREILQLLSSEDSNLNLPVI-----FIHEIDFPKRVSSEE--SDYECLIQRGEPTP 173
Query: 181 SWVRP----KSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
S + + + DP+ LNYT GTT+ PKGVV ++ ++ + ++I W + V LWT
Sbjct: 174 SLLARMFCIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWT 233
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSS 294
LPMFH NGW+FTWG A G T+VC+R AP ++ I H VTHMC P V N+L +S
Sbjct: 234 LPMFHCNGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNS 293
Query: 295 PEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLP 354
+ PV +LT GSPPPA ++ + + LGF V H YG TE G + C W+ +WN+LP
Sbjct: 294 LDLSHRSGPVHVLTGGSPPPAALVKKVQRLGFQVMHAYGLTEATGPVLFCEWQDEWNRLP 353
Query: 355 ARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEAT 414
++ LKARQG+ +GLTEVD+ + ET SV RDG+T GEIVM+G S+M GYLK+P+AT
Sbjct: 354 ENQQMELKARQGLSILGLTEVDVRNKETQESVPRDGKTMGEIVMKGSSIMKGYLKNPKAT 413
Query: 415 SKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474
+ K G +GDVG++HPDG++EIKDRSKD+IISGGENISS E+E+++Y +P V E AV
Sbjct: 414 YEAFKHGWLNSGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENIIYKYPKVLETAV 473
Query: 475 VGRPDPFWQEIPCAFVSLKTGTDSG-----GMMTTEKDIIQYCRARIPRYMVPKTVVFID 529
V P P W E PCAFV L+ G + ++T E+D+I+YCR +P +M P+ VVF+D
Sbjct: 474 VAMPHPTWGETPCAFVVLEKGETNNEDREDKLVTKERDLIEYCRENLPHFMCPRKVVFLD 533
Query: 530 ELPKTATGKVQKYVLGDIANSM 551
ELPK GK+ K L DIA +
Sbjct: 534 ELPKNGNGKILKPKLRDIAKGL 555
>gi|297850474|ref|XP_002893118.1| adenosine monophosphate binding protein 1 AMPBP1 [Arabidopsis
lyrata subsp. lyrata]
gi|297338960|gb|EFH69377.1| adenosine monophosphate binding protein 1 AMPBP1 [Arabidopsis
lyrata subsp. lyrata]
Length = 555
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 253/554 (45%), Positives = 363/554 (65%), Gaps = 13/554 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ +PAN PLTP+ F++R+A D S++Y YTW QT RC+++AS+LS G
Sbjct: 1 MEGTIKSPANYVPLTPISFLDRSAVVYADRVSVVYGSVKYTWRQTRDRCVRIASALSQLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I+ G VVSV+APNIPAM ELHF VPM+GA+ T+N R D+ ++++L+HS +K++F DH
Sbjct: 61 ISTGDVVSVLAPNIPAMVELHFGVPMAGALLCTLNIRHDSALVAVLLRHSGTKVIFADHQ 120
Query: 121 SSSLLLEVVSLFPPHS-KTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ + K P LVL+ + ++ S S R + + YE+++A G
Sbjct: 121 FLQIAQGACEILSKKGDKVPILVLVPE--PLTQSVSGKKR--SEEDIMEYEDVVAMGKSD 176
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F +RP + DP+ +NYT GTTS+PKGVV ++ ++ ++ +++ + LWT PM
Sbjct: 177 FEVIRPTDECDPISVNYTSGTTSSPKGVVYSHRGAYLNSLAAVLLNEMHSSPTYLWTNPM 236
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW WG +G TN+CLR A +F + +H VTHM GAP +LN++ ++PE++Q
Sbjct: 237 FHCNGWCLLWGVTAIGGTNICLRNVTAKAIFDNVSQHKVTHMGGAPTILNMIINAPESEQ 296
Query: 300 LDRP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
P V +T +PPPA V+ + E LGF + H YG TE G C WKP+W+ LP E
Sbjct: 297 KSLPGKVSFITGAAPPPAHVIYKMEELGFSMFHSYGLTETYGPGTICTWKPEWDSLPREE 356
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A +KARQGV IG+ E+ + DP T ++ DG T GE+V RG ++M GYLK+PEAT +
Sbjct: 357 QAKMKARQGVNHIGIEEIQVKDPVTMRTLPADGVTMGEVVFRGNTVMNGYLKNPEATKEA 416
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
K G +++GD+G+ HPDGY+E+KDRSKD+IISGGENISS E+ES L++HP V EAAVV R
Sbjct: 417 FKGGWFWSGDLGVKHPDGYIELKDRSKDIIISGGENISSIEVESTLFTHPCVLEAAVVAR 476
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD +W E CAFV LK G+ M + +++I YCR R+P YM P+++VF ++LPKT+TG
Sbjct: 477 PDEYWGETACAFVKLKDGS-----MASAEELISYCRDRLPHYMAPRSIVF-EDLPKTSTG 530
Query: 538 KVQKYVLGDIANSM 551
KVQK+VL A ++
Sbjct: 531 KVQKFVLRTKAKAL 544
>gi|297838249|ref|XP_002887006.1| acyl-activating enzyme 11 [Arabidopsis lyrata subsp. lyrata]
gi|297332847|gb|EFH63265.1| acyl-activating enzyme 11 [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 272/562 (48%), Positives = 366/562 (65%), Gaps = 25/562 (4%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD L AN+ PLTP+ F++RA+ + SIIY T +TW QTY RC +LA+SL S
Sbjct: 1 MDNLALCEANNVPLTPITFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLLSLN 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I VVS++APN+PA+YE+HF+VPM+GA+ N INTRLDA+TI+IIL+H+E K++FVDH
Sbjct: 61 ITRNDVVSILAPNVPAIYEMHFSVPMTGAVLNPINTRLDAKTIAIILRHAEPKILFVDHE 120
Query: 121 SSSLLLEVVSLFP-----PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAK 175
+ L+ EV+SL P PH P+++ I EI S+++P + D YE ++ K
Sbjct: 121 FAPLIQEVLSLLPTDESQPH---PRIIFIN---EIDSTTNPFSK----DL--DYEGLIRK 168
Query: 176 GDPQ----FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQS 231
G+P S ++ DP+ LNYT GTT+ PKGVV ++ ++ A+ +I W +
Sbjct: 169 GEPTPSLYASMFLVHNEHDPISLNYTSGTTADPKGVVVSHRGAYLSALSLIIGWQMGIFP 228
Query: 232 VLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL 291
V LWTLP+FH NGW+ W A G TNVC+R AP ++ I HGVTHM P V L
Sbjct: 229 VYLWTLPIFHCNGWTLPWSVAARGGTNVCIRHVTAPEIYKNIELHGVTHMSCVPTVFRFL 288
Query: 292 SSSPEAKQLDR--PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPK 349
Q + PV++LT GS PPA ++ + E LGF V HGYG TE G + C W+ +
Sbjct: 289 LEGDRTNQSHKSPPVQVLTGGSSPPAVLIKKVEQLGFQVMHGYGLTEATGPVLFCEWQDE 348
Query: 350 WNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLK 409
WNKLP ++ L+ RQGVR + L +VD+ + +T SV RDG+T GEIV++G LM GYLK
Sbjct: 349 WNKLPEHQQMQLQQRQGVRHLTLADVDVKNTKTLESVPRDGKTMGEIVIKGSILMKGYLK 408
Query: 410 DPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMV 469
+P+ATS+ K G TGD+G++HPDGY+EIKDRSKD+IISGGENISS E+E VLY H V
Sbjct: 409 NPKATSEAFKHGWLNTGDIGVIHPDGYVEIKDRSKDIIISGGENISSIEVEKVLYMHQQV 468
Query: 470 NEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFID 529
EAAVV P P W E PCAFV LK G + ++T E D+I+YCR +P +M P+ VVF
Sbjct: 469 LEAAVVAMPHPLWGETPCAFVVLKNGEEE--LVTNEGDLIKYCRENMPHFMCPRKVVFFQ 526
Query: 530 ELPKTATGKVQKYVLGDIANSM 551
ELPK + GK+ K L D+A ++
Sbjct: 527 ELPKNSNGKIPKSKLRDVAKAL 548
>gi|116788879|gb|ABK25037.1| unknown [Picea sitchensis]
Length = 569
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 265/558 (47%), Positives = 357/558 (63%), Gaps = 12/558 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L PAN LTPL FI+RAA S+I+ YTW QTY RC +LAS+L+
Sbjct: 9 IDDLPKCPANYTALTPLWFIQRAALVYPKRKSVIHGARQYTWDQTYERCRRLASALAKRS 68
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I PG V V+APNIPA YE HF +PM+GA+ N+IN RLDARTI+ +L+HS + V VD
Sbjct: 69 IGPGTTVGVLAPNIPAAYEAHFGIPMAGAVLNSINIRLDARTIAFLLEHSRAVAVLVDQD 128
Query: 121 SSSLLLEVVSLFPPHSKT----PKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG 176
LL E + L + P LV+I D+ + R + YE+ L +G
Sbjct: 129 FFMLLQEALGLMAKKHGSGFEPPFLVVIGDETCDEGNLKRALRSGAVE----YEDFLQEG 184
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
DP F W P + + L YT GTTS+PKGVV ++ ++ ++ + + W + V LWT
Sbjct: 185 DPGFEWQPPDDEWQSIALGYTSGTTSSPKGVVLSHRGAYVASLGAALAWEMKGSGVYLWT 244
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSP 295
LPMFH NGW + WG A TN+CLR+ A ++A I +H VTH C AP+VLN +++ P
Sbjct: 245 LPMFHCNGWCYAWGMAAFCGTNICLRQVTARAIYASIAEHKVTHFCAAPVVLNTVVNCDP 304
Query: 296 EAK-QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLP 354
+ + + R + ++TAGS PPA VL + E GF V+H YG +E G +V CAWK +W+ LP
Sbjct: 305 QDRVPIPRGISVMTAGSAPPASVLAKMEEQGFRVTHTYGLSETYGPSVVCAWKEEWDSLP 364
Query: 355 ARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEAT 414
+RA + ARQGVR I L +D+V+P++ + V DG T GEIVMRG +M GYL++PEA
Sbjct: 365 PTDRARMNARQGVRYISLEGLDVVNPDSMVPVPADGSTVGEIVMRGNMMMKGYLRNPEAN 424
Query: 415 SKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474
+ + G +++GD+ + HPDGY+EIKDRSKD+IISGGENISS E+E+ LY HP V EA+V
Sbjct: 425 RESFRGGWFHSGDLAVKHPDGYIEIKDRSKDIIISGGENISSVEVENALYGHPRVLEASV 484
Query: 475 VGRPDPFWQEIPCAFVSLK-TGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPK 533
V RPD W E PCAF++LK +G + +DI+ YCRAR+P YMVP++VVF LPK
Sbjct: 485 VARPDERWGETPCAFITLKGSGDPNEDESRIGQDIMNYCRARLPGYMVPRSVVF-GPLPK 543
Query: 534 TATGKVQKYVLGDIANSM 551
TATGKVQK++L A M
Sbjct: 544 TATGKVQKHILRSKAKQM 561
>gi|242042375|ref|XP_002468582.1| hypothetical protein SORBIDRAFT_01g048390 [Sorghum bicolor]
gi|241922436|gb|EER95580.1| hypothetical protein SORBIDRAFT_01g048390 [Sorghum bicolor]
Length = 583
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 264/557 (47%), Positives = 355/557 (63%), Gaps = 16/557 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD+L PAN PL+P+GF+ RA D S+IY +TW QTY RC +LAS+L S G
Sbjct: 1 MDQLPKRPANYVPLSPVGFLPRANAVYGDRASVIYGRVRFTWRQTYHRCRRLASALLSLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ G VVSV+APN+PAMYE+HFAVPM+GA+ NTINTRLDA ++ IL+HS +KL FVD+
Sbjct: 61 VRRGDVVSVLAPNVPAMYEMHFAVPMAGAVLNTINTRLDAGAVATILRHSGAKLFFVDYD 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
L + + L TP + L+ +I S + R+ + YE ++A DP
Sbjct: 121 YVRLASDALRLLAADG-TPAVPLVAVIDDIDSPTGA--RLGELE----YEALVAHADPDA 173
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+ + D + LNYT GTTSAPKGVV ++ ++ L+ W V + V LWTLPMF
Sbjct: 174 DLPPLEDEWDAVTLNYTSGTTSAPKGVVYSHRGAYLSTTSLLLQWGVTTEPVYLWTLPMF 233
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL-----SSSP 295
H NGW+FTWG A G NVC+R ++ I +H VTHMC AP+V ++L +
Sbjct: 234 HCNGWTFTWGMAARGGVNVCIRDARPADIYRAIARHRVTHMCCAPVVFSILLEGQGAGDG 293
Query: 296 EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
A+QL+ PV +LT G+PPPA +L R E +GF V+H YG TE G ++C W+ +W++LP
Sbjct: 294 AARQLEAPVHVLTGGAPPPAALLERVERIGFKVTHAYGLTEATGPALACEWRGQWDRLPL 353
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
ERA LKARQGV + L + D+ + ET +SV RDG+T GEIV+RG S+M GYL +PEA
Sbjct: 354 PERARLKARQGVSVLSLADADVKNAETMVSVPRDGKTVGEIVLRGSSVMKGYLNNPEANE 413
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
+ G + TGDVG++H DGY+EIKDRSKDVIISGGENI S E+E VL+ HP V +AAVV
Sbjct: 414 NAFRGGWFLTGDVGVVHQDGYIEIKDRSKDVIISGGENICSKEVEEVLFRHPAVADAAVV 473
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
P P+W E PCAFV + +E D++ +CR R+ R+MVPK V + LP+ A
Sbjct: 474 AMPHPYWGETPCAFVVRRNSAAE----LSEDDVLAFCRKRMARFMVPKKVQVVGALPRNA 529
Query: 536 TGKVQKYVLGDIANSMS 552
GKV+K L + A ++
Sbjct: 530 LGKVEKVKLREAARKLA 546
>gi|346990428|gb|AEO52695.1| benzoyl-CoA/cinnamoyl-CoA ligase [Clarkia breweri]
Length = 583
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 266/556 (47%), Positives = 353/556 (63%), Gaps = 9/556 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSS-F 59
MD L AN PLTPL F++RAA + D S+IY +TW QTY RC +LA++L++
Sbjct: 1 MDVLPKCSANYVPLTPLTFLKRAAFSYADRTSLIYEHLRFTWRQTYHRCSRLAAALTNIL 60
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
+ VVSV+APNIPA+YE+HFAVPM+ A+ NTINTRLDA T+S IL+HS +K++FVD
Sbjct: 61 NVRKNDVVSVLAPNIPAVYEMHFAVPMARAVLNTINTRLDAHTVSTILRHSGTKILFVD- 119
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+L + +LV+I D+ S+ + + E A D Q
Sbjct: 120 --CQFVLLARQALALLNHPIRLVIINDETLALSAPIGAGEVEYEHLIS--ETGFADVDDQ 175
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
V + DP+ LNYT GTTS PKGVV ++ ++ + ++ W + + V LWTLPM
Sbjct: 176 IMSV--DDEWDPIALNYTSGTTSEPKGVVYSHRGAYLSTLSLILGWEMGSEPVYLWTLPM 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW+FTWG A G TNVC+R A ++ I H VTHMC API+ N+L
Sbjct: 234 FHCNGWTFTWGIAARGGTNVCMRNPTAEGIYRNIAVHKVTHMCCAPIIFNILLEEENRIP 293
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L V ILT G+PPPA +L ESLGF V+H YG TE G + C W+ KWN L + +RA
Sbjct: 294 LTSAVNILTGGAPPPAALLQSIESLGFHVTHAYGLTEATGPALLCEWQSKWNGLSSGDRA 353
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKARQG+ + + +VD+ DP SV DG T GEI++RG +M GY KDP+ATS K
Sbjct: 354 RLKARQGINVLTVADVDVKDPNNMKSVAHDGTTMGEIMLRGSGIMKGYYKDPKATSDAFK 413
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGDVG++HPDGY+EIKDRSKDVIISGGENISS E+E VLY HP V EAAVV P
Sbjct: 414 GGWFFTGDVGVIHPDGYVEIKDRSKDVIISGGENISSIELEEVLYKHPRVLEAAVVAMPH 473
Query: 480 PFWQEIPCAFVSLKTGTDS-GGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
P W E PCAF+++K + G TE +I+ +C+ +P +MVPK V F+D LPKT+TGK
Sbjct: 474 PRWGESPCAFIAVKKNPNGFRGDEVTEAEIVSFCKKNVPNFMVPKKVEFLDSLPKTSTGK 533
Query: 539 VQKYVLGDIANSMSMS 554
+QK+ L +A ++ ++
Sbjct: 534 IQKFQLRALAKALVVT 549
>gi|18394877|ref|NP_564116.1| acyl activating enzyme 1 [Arabidopsis thaliana]
gi|378548264|sp|F4HUK6.1|AAE1_ARATH RecName: Full=Probable acyl-activating enzyme 1, peroxisomal;
AltName: Full=AMP-binding protein 1; Short=AtAMPBP1
gi|332191865|gb|AEE29986.1| acyl activating enzyme 1 [Arabidopsis thaliana]
Length = 556
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/554 (45%), Positives = 361/554 (65%), Gaps = 14/554 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ +PAN PLTP+ F++R+A D SI+Y YTW QT RC+++AS+LS G
Sbjct: 3 MEGTIKSPANYVPLTPISFLDRSAVVYADRVSIVYGSVKYTWRQTRDRCVRIASALSQLG 62
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I+ G VVSV+APN+PAM ELHF VPM+GA+ T+N R D+ ++++L+HS +K++F DH
Sbjct: 63 ISTGDVVSVLAPNVPAMVELHFGVPMAGALLCTLNIRHDSSLVAVLLRHSGTKVIFADHQ 122
Query: 121 SSSLLLEVVSLFPPHS-KTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ + K P LVLI + S S R ++ + YE+++A G
Sbjct: 123 FLQIAEGACEILSNKGDKVPILVLIPEPLTQSVS-----RKKRSEEMMEYEDVVAMGKSD 177
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F +RP + D + +NYT GTTS+PKGVV ++ ++ ++ +++ + LWT PM
Sbjct: 178 FEVIRPTDECDAISVNYTSGTTSSPKGVVYSHRGAYLNSLAAVLLNEMHSSPTYLWTNPM 237
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW WG +G TN+CLR A +F I +H VTHM GAP +LN++ ++PE++Q
Sbjct: 238 FHCNGWCLLWGVTAIGGTNICLRNVTAKAIFDNISQHKVTHMGGAPTILNMIINAPESEQ 297
Query: 300 LDRP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
P V +T +PPPA V+ + E LGF + H YG TE G C WKP+W+ LP E
Sbjct: 298 KPLPGKVSFITGAAPPPAHVIFKMEELGFSMFHSYGLTETYGPGTICTWKPEWDSLPREE 357
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A +KARQGV +GL E+ + DP T ++ DG T GE+V RG ++M GYLK+PEAT +
Sbjct: 358 QAKMKARQGVNHLGLEEIQVKDPVTMRTLPADGVTMGEVVFRGNTVMNGYLKNPEATKEA 417
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
K G +++GD+G+ HPDGY+E+KDRSKD+IISGGENISS E+ES L++HP V EAAVV R
Sbjct: 418 FKGGWFWSGDLGVKHPDGYIELKDRSKDIIISGGENISSIEVESTLFTHPCVLEAAVVAR 477
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD +W E CAFV LK G+ + + +++I YCR R+P YM P+++VF ++LPKT+TG
Sbjct: 478 PDEYWGETACAFVKLKDGSKA-----SAEELISYCRDRLPHYMAPRSIVF-EDLPKTSTG 531
Query: 538 KVQKYVLGDIANSM 551
KVQK+VL A ++
Sbjct: 532 KVQKFVLRTKAKAL 545
>gi|20799711|gb|AAM28618.1|AF503760_1 adenosine monophosphate binding protein 1 AMPBP1 [Arabidopsis
thaliana]
Length = 554
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/554 (45%), Positives = 361/554 (65%), Gaps = 14/554 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ +PAN PLTP+ F++R+A D SI+Y YTW QT RC+++AS+LS G
Sbjct: 1 MEGTIKSPANYVPLTPISFLDRSAVVYADRVSIVYGSVKYTWRQTRDRCVRIASALSQLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I+ G VVSV+APN+PAM ELHF VPM+GA+ T+N R D+ ++++L+HS +K++F DH
Sbjct: 61 ISTGDVVSVLAPNVPAMVELHFGVPMAGALLCTLNIRHDSSLVAVLLRHSGTKVIFADHQ 120
Query: 121 SSSLLLEVVSLFPPHS-KTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ + K P LVLI + S S R ++ + YE+++A G
Sbjct: 121 FLQIAEGACEILSNKGDKVPILVLIPEPLTQSVS-----RKKRSEEMMEYEDVVAMGKSD 175
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F +RP + D + +NYT GTTS+PKGVV ++ ++ ++ +++ + LWT PM
Sbjct: 176 FEVIRPTDECDAISVNYTSGTTSSPKGVVYSHRGAYLNSLAAVLLNEMHSSPTYLWTNPM 235
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW WG +G TN+CLR A +F I +H VTHM GAP +LN++ ++PE++Q
Sbjct: 236 FHCNGWCLLWGVTAIGGTNICLRNVTAKAIFDNISQHKVTHMGGAPTILNMIINAPESEQ 295
Query: 300 LDRP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
P V +T +PPPA V+ + E LGF + H YG TE G C WKP+W+ LP E
Sbjct: 296 KPLPGKVSFITGAAPPPAHVIFKMEELGFSMFHSYGLTETYGPGTICTWKPEWDSLPREE 355
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A +KARQGV +GL E+ + DP T ++ DG T GE+V RG ++M GYLK+PEAT +
Sbjct: 356 QAKMKARQGVNHLGLEEIQVKDPVTMRTLPADGVTMGEVVFRGNTVMNGYLKNPEATKEA 415
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
K G +++GD+G+ HPDGY+E+KDRSKD+IISGGENISS E+ES L++HP V EAAVV R
Sbjct: 416 FKGGWFWSGDLGVKHPDGYIELKDRSKDIIISGGENISSIEVESTLFTHPCVLEAAVVAR 475
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD +W E CAFV LK G+ + + +++I YCR R+P YM P+++VF ++LPKT+TG
Sbjct: 476 PDEYWGETACAFVKLKDGSKA-----SAEELISYCRDRLPHYMAPRSIVF-EDLPKTSTG 529
Query: 538 KVQKYVLGDIANSM 551
KVQK+VL A ++
Sbjct: 530 KVQKFVLRTKAKAL 543
>gi|225431902|ref|XP_002276533.1| PREDICTED: medium-chain-fatty-acid--CoA ligase [Vitis vinifera]
Length = 567
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 262/560 (46%), Positives = 360/560 (64%), Gaps = 16/560 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL F+ERAA + S+I+ YTW QTY+RC +LAS+LS +
Sbjct: 7 IDDLPKNAANYTALTPLWFLERAAVVHPNRKSVIHGSLQYTWLQTYQRCRRLASALSKYS 66
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G V++IAPNIPAMYE HF VPMSGA+ N +N RL+A TI+ +L+HS + +V VD
Sbjct: 67 IGAGSTVAIIAPNIPAMYEAHFGVPMSGAVVNCVNIRLNAPTIAFLLEHSSAAVVMVDQE 126
Query: 121 SSSLLLEVVSLFPPHSKT----PKLVLITDDKEISSSSSPPPRIPPA--DFVDTYENMLA 174
L E + ++ SK P L++I D+ S P + A V YE L
Sbjct: 127 FFPLAEEALKIWSGKSKNDFKPPLLIVIADE------SCDPKGLEYALRKGVIEYEQFLE 180
Query: 175 KGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLL 234
GDP+F+W P+ + + L YT GTT++PKGVV ++ +++A+ + W + + +V L
Sbjct: 181 TGDPEFAWKPPQDEWQSIALGYTSGTTASPKGVVLHHRGAYVMALSGALVWGMNEGAVYL 240
Query: 235 WTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS 294
WTLPMFH NGW FTW A + TN+CLR+ ++ I GVTH+C AP+VLN + ++
Sbjct: 241 WTLPMFHCNGWCFTWTLAALCGTNICLRQVATKAIYQAIANDGVTHLCAAPVVLNSIVNA 300
Query: 295 PEAKQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWN 351
P+++ L R V ++TAG+ PP VL GF V+H YG +E G + CAWKP+W+
Sbjct: 301 PKSETILPLPRVVHVMTAGAAPPPSVLFAMSQQGFRVTHTYGLSETYGPSTVCAWKPEWD 360
Query: 352 KLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDP 411
+LP +A L ARQGVR IGL +D+V V DG T GEIVMRG ++M GYLK+P
Sbjct: 361 ELPPETQARLNARQGVRYIGLEGLDVVSTTDMKPVPADGTTIGEIVMRGNTVMKGYLKNP 420
Query: 412 EATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNE 471
+A + +G +++GD+G+ HPDGY+++KDRSKD+IISGGENISS EIE+ +Y HP V E
Sbjct: 421 KANEETFANGWFHSGDLGVKHPDGYIQLKDRSKDIIISGGENISSVEIENAVYLHPAVLE 480
Query: 472 AAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDEL 531
A+VV RPD W E PCAFV+LK G D +DI+++CR+R+P Y +PK+VVF L
Sbjct: 481 ASVVARPDDRWGESPCAFVTLKPGVDRSDERRLAEDIMKFCRSRLPAYWIPKSVVF-GPL 539
Query: 532 PKTATGKVQKYVLGDIANSM 551
PKTATGK+QK++L A M
Sbjct: 540 PKTATGKIQKHLLRARAKEM 559
>gi|15218840|ref|NP_176764.1| acyl activating enzyme 12 [Arabidopsis thaliana]
gi|75313811|sp|Q9SS00.1|AAE12_ARATH RecName: Full=Probable acyl-activating enzyme 12, peroxisomal
gi|6227014|gb|AAF06050.1|AC009513_6 Similar to gb|X94625 amp-binding protein from Brassica napus and is
a member of the PF|00501 AMP-binding enzymes
[Arabidopsis thaliana]
gi|332196316|gb|AEE34437.1| acyl activating enzyme 12 [Arabidopsis thaliana]
Length = 578
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 261/562 (46%), Positives = 356/562 (63%), Gaps = 18/562 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD L AN+ PLTP+ F++RA+ + SIIY T +TW QTY RC +LA+SL S
Sbjct: 1 MDNLALCEANNVPLTPITFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLISLN 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I VVSV+APN PAMYE+HFAVPM+GA+ N INTRLDA +I+ IL+H++ K++F+
Sbjct: 61 IGKNDVVSVVAPNTPAMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFIYRS 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ- 179
L E++ L L +I P R+ + YE ++ +G+P
Sbjct: 121 FEPLAREILQLLSSEDSNLNLPVI-----FIHEIDFPKRVSSEE--SDYECLIQRGEPTP 173
Query: 180 ---FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
+ + DP+ LNYT GTT+ PKGVV ++ ++ + ++I W + V LWT
Sbjct: 174 LLLARMFCIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWT 233
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSS 294
LPMFH NGW+FTWG A G T+VC+R AP ++ I H VTHMC P V N+L +S
Sbjct: 234 LPMFHCNGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNS 293
Query: 295 PEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLP 354
+ PV +LT GSPPPA ++ + + LGF V H YG TE G + C W+ +WN+LP
Sbjct: 294 LDLSHRSGPVHVLTGGSPPPAALVKKVQRLGFQVMHAYGLTEATGPVLFCEWQDEWNRLP 353
Query: 355 ARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEAT 414
++ LKARQG+ +GLTEVD+ + ET SV RDG+T GEIVM+G S+M GYLK+P+AT
Sbjct: 354 ENQQMELKARQGLSILGLTEVDVRNKETQESVPRDGKTMGEIVMKGSSIMKGYLKNPKAT 413
Query: 415 SKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474
+ K G +GDVG++HPDG++EIKDRSKD+IISGGENISS E+E+++Y +P V E AV
Sbjct: 414 YEAFKHGWLNSGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENIIYKYPKVLETAV 473
Query: 475 VGRPDPFWQEIPCAFVSLKTGTDSG-----GMMTTEKDIIQYCRARIPRYMVPKTVVFID 529
V P P W E PCAFV L+ G + ++T E+D+I+YCR +P +M P+ VVF+D
Sbjct: 474 VAMPHPTWGETPCAFVVLEKGETNNEDREDKLVTKERDLIEYCRENLPHFMCPRKVVFLD 533
Query: 530 ELPKTATGKVQKYVLGDIANSM 551
ELPK GK+ K L DIA +
Sbjct: 534 ELPKNGNGKILKPKLRDIAKGL 555
>gi|115452559|ref|NP_001049880.1| Os03g0305100 [Oryza sativa Japonica Group]
gi|108707723|gb|ABF95518.1| AMP-binding enzyme family protein, expressed [Oryza sativa Japonica
Group]
gi|113548351|dbj|BAF11794.1| Os03g0305100 [Oryza sativa Japonica Group]
Length = 574
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 261/566 (46%), Positives = 361/566 (63%), Gaps = 13/566 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL F+ERAA D ++++ YTW++TYRRC +LAS+L+
Sbjct: 14 IDDLPRNDANYTALTPLWFLERAAVVHPDRAAVVHGPVRYTWAETYRRCRRLASALAQRS 73
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ PG V+VIAPN+PA+YE HF VPMSGA+ N +N RL+A TI+ +L HS +++V VD
Sbjct: 74 VGPGCTVAVIAPNVPALYEAHFGVPMSGAVVNCVNIRLNAETIAFLLDHSVAEVVMVDQE 133
Query: 121 SSSLLLEVVSLFPPHSK----TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG 176
+L E + + K P L++I D + P + YE L G
Sbjct: 134 FFTLAEESLKILAEKKKWSFRPPILIVIGD----PTCDPKPLQYALGRGAIEYEEFLKTG 189
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
DP+F+W PK + + L YT GTTS+PKGVV ++ +++A+ + W +P+ +V LWT
Sbjct: 190 DPEFAWKPPKDEWQSIALGYTSGTTSSPKGVVLHHRGAYVMALGVAMVWGMPEGAVYLWT 249
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
LPMFH NGW +TW A + TN+CLR+ + +++ I HGVTHMC AP+V N L ++P
Sbjct: 250 LPMFHCNGWCYTWAMAAMCGTNICLRQVSSKAIYSGIVNHGVTHMCAAPVVFNNLINAPA 309
Query: 297 AKQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKL 353
++ L R V I+ AG+ P +L GF V+H YG +E G + CAWKP+W++L
Sbjct: 310 SETFLPLPRVVNIMVAGAAPTPSLLAALSIRGFRVTHTYGLSETYGPSTVCAWKPEWDRL 369
Query: 354 PARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
P ER+ L RQGVR L +D+VDP+T V DG++ GEIVMRG ++M GYLK+P+A
Sbjct: 370 PLEERSRLHCRQGVRYGALEGLDVVDPKTMAPVAADGKSYGEIVMRGNAVMKGYLKNPKA 429
Query: 414 TSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
++ G Y++GD+G+ HPDGY+E+KDR KD+IISGGENISS E+E VLY+HP V EA+
Sbjct: 430 NAEAFAGGWYHSGDLGVKHPDGYIEVKDRMKDIIISGGENISSLEVEKVLYAHPAVLEAS 489
Query: 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPK 533
VV R D W E PCAFV+LK G DS DI+++CR R+P Y VPK+VVF LPK
Sbjct: 490 VVARADEQWGESPCAFVTLKEGADSSDEAAVAGDIMRFCRERMPGYWVPKSVVF-GPLPK 548
Query: 534 TATGKVQKYVLGDIANSMS-MSHSRM 558
TATGK++K+ L A + + SRM
Sbjct: 549 TATGKIKKHELRTKAKELGPVKKSRM 574
>gi|222624777|gb|EEE58909.1| hypothetical protein OsJ_10548 [Oryza sativa Japonica Group]
Length = 659
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 261/566 (46%), Positives = 361/566 (63%), Gaps = 13/566 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL F+ERAA D ++++ YTW++TYRRC +LAS+L+
Sbjct: 99 IDDLPRNDANYTALTPLWFLERAAVVHPDRAAVVHGPVRYTWAETYRRCRRLASALAQRS 158
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ PG V+VIAPN+PA+YE HF VPMSGA+ N +N RL+A TI+ +L HS +++V VD
Sbjct: 159 VGPGCTVAVIAPNVPALYEAHFGVPMSGAVVNCVNIRLNAETIAFLLDHSVAEVVMVDQE 218
Query: 121 SSSLLLEVVSLFPPHSK----TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG 176
+L E + + K P L++I D + P + YE L G
Sbjct: 219 FFTLAEESLKILAEKKKWSFRPPILIVIGD----PTCDPKPLQYALGRGAIEYEEFLKTG 274
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
DP+F+W PK + + L YT GTTS+PKGVV ++ +++A+ + W +P+ +V LWT
Sbjct: 275 DPEFAWKPPKDEWQSIALGYTSGTTSSPKGVVLHHRGAYVMALGVAMVWGMPEGAVYLWT 334
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
LPMFH NGW +TW A + TN+CLR+ + +++ I HGVTHMC AP+V N L ++P
Sbjct: 335 LPMFHCNGWCYTWAMAAMCGTNICLRQVSSKAIYSGIVNHGVTHMCAAPVVFNNLINAPA 394
Query: 297 AKQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKL 353
++ L R V I+ AG+ P +L GF V+H YG +E G + CAWKP+W++L
Sbjct: 395 SETFLPLPRVVNIMVAGAAPTPSLLAALSIRGFRVTHTYGLSETYGPSTVCAWKPEWDRL 454
Query: 354 PARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
P ER+ L RQGVR L +D+VDP+T V DG++ GEIVMRG ++M GYLK+P+A
Sbjct: 455 PLEERSRLHCRQGVRYGALEGLDVVDPKTMAPVAADGKSYGEIVMRGNAVMKGYLKNPKA 514
Query: 414 TSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
++ G Y++GD+G+ HPDGY+E+KDR KD+IISGGENISS E+E VLY+HP V EA+
Sbjct: 515 NAEAFAGGWYHSGDLGVKHPDGYIEVKDRMKDIIISGGENISSLEVEKVLYAHPAVLEAS 574
Query: 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPK 533
VV R D W E PCAFV+LK G DS DI+++CR R+P Y VPK+VVF LPK
Sbjct: 575 VVARADEQWGESPCAFVTLKEGADSSDEAAVAGDIMRFCRERMPGYWVPKSVVF-GPLPK 633
Query: 534 TATGKVQKYVLGDIANSMS-MSHSRM 558
TATGK++K+ L A + + SRM
Sbjct: 634 TATGKIKKHELRTKAKELGPVKKSRM 659
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 31 PSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
P++++ YTW++TYRRC +LAS+L+ + PG + P
Sbjct: 39 PAVVHGPVRYTWAETYRRCRRLASALAQRSVGPGCTSAFCCPT 81
>gi|13937177|gb|AAK50082.1|AF372942_1 At1g20560/F2D10_4 [Arabidopsis thaliana]
gi|18700260|gb|AAL77740.1| At1g20560/F2D10_4 [Arabidopsis thaliana]
Length = 556
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/554 (45%), Positives = 361/554 (65%), Gaps = 14/554 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ +PAN PLTP+ F++R+A D SI+Y YTW QT RC+++AS+LS G
Sbjct: 3 MEGTIKSPANYVPLTPISFLDRSAVVYADRVSIVYGSVKYTWRQTRDRCVRIASALSQLG 62
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I+ G VVSV+APN+PAM ELHF VPM+GA+ T+N R D+ ++++L+HS +K++F DH
Sbjct: 63 ISTGDVVSVLAPNVPAMVELHFGVPMAGALLCTLNIRHDSSLVAVLLRHSGTKVIFADHQ 122
Query: 121 SSSLLLEVVSLFPPHS-KTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ + K P LVLI + S S R ++ + YE+++A G
Sbjct: 123 FLQIADGACEILSNKGDKVPILVLIPEPLTQSVS-----RKKRSEEMMEYEDVVAMGKSD 177
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F +RP + D + +NYT GTTS+PKGVV ++ ++ ++ +++ + LWT PM
Sbjct: 178 FEVIRPTDECDAISVNYTSGTTSSPKGVVYSHRGAYLNSLAAVLLNEMHSSPTYLWTNPM 237
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW WG +G TN+CLR A +F I +H VTHM GAP +LN++ ++PE++Q
Sbjct: 238 FHCNGWCLLWGVTAIGGTNICLRNVTAKAIFDNISQHKVTHMGGAPTILNMIINAPESEQ 297
Query: 300 LDRP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
P V +T +PPPA V+ + E LGF + H YG TE G C WKP+W+ LP E
Sbjct: 298 KPLPGKVSFITGAAPPPAHVIFKMEELGFSMFHSYGLTETYGPGTICTWKPEWDSLPREE 357
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A +KARQGV +GL E+ + DP T ++ DG T GE+V RG ++M GYLK+PEAT +
Sbjct: 358 QAKMKARQGVNHLGLEEIQVKDPVTMRTLPADGVTMGEVVFRGNTVMNGYLKNPEATKEA 417
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
K G +++GD+G+ HPDGY+E+KDRSKD+IISGGENISS E+ES L++HP V EAAVV R
Sbjct: 418 FKGGWFWSGDLGVKHPDGYIELKDRSKDIIISGGENISSIEVESTLFTHPCVLEAAVVAR 477
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD +W E CAFV LK G+ + + +++I YCR R+P YM P+++VF ++LPKT+TG
Sbjct: 478 PDEYWGETACAFVKLKDGSKA-----SAEELISYCRDRLPHYMAPRSIVF-EDLPKTSTG 531
Query: 538 KVQKYVLGDIANSM 551
KVQK+VL A ++
Sbjct: 532 KVQKFVLRTKAKAL 545
>gi|15215766|gb|AAK91428.1| At1g65890/F12P19_6 [Arabidopsis thaliana]
gi|16974331|gb|AAL31150.1| At1g65890/F12P19_6 [Arabidopsis thaliana]
Length = 578
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 261/562 (46%), Positives = 356/562 (63%), Gaps = 18/562 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD L AN+ PLTP+ F++RA+ + SIIY T +TW QTY RC +LA+SL S
Sbjct: 1 MDNLALCEANNVPLTPITFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLISLN 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I VVSV+APN PAMYE+HFAVPM+GA+ N INTRLDA +I+ IL+H++ K++F+
Sbjct: 61 IGKNDVVSVVAPNTPAMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFIYRS 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ- 179
L E++ L L +I P R+ + YE ++ +G+P
Sbjct: 121 FEPLAREILQLLSSEDSNLNLPVI-----FIHEIDFPKRVSSEE--SDYECLIQRGEPTP 173
Query: 180 ---FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
+ + DP+ LNYT GTT+ PKGVV ++ ++ + ++I W + V LWT
Sbjct: 174 LLLARMFCIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWT 233
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSS 294
LPMFH NGW+FTWG A G T+VC+R AP ++ I H VTHMC P V N+L +S
Sbjct: 234 LPMFHCNGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNS 293
Query: 295 PEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLP 354
+ PV +LT GSPPPA ++ + + LGF V H YG TE G + C W+ +WN+LP
Sbjct: 294 LDLSHRSGPVHVLTGGSPPPAALVKKVQRLGFQVMHAYGLTEATGPVLFCEWQDEWNRLP 353
Query: 355 ARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEAT 414
++ LKARQG+ +GLTEVD+ + ET SV RDG+T GEIVM+G S+M GYLK+P+AT
Sbjct: 354 ENQQMELKARQGLSILGLTEVDVRNKETQESVPRDGKTMGEIVMKGSSIMKGYLKNPKAT 413
Query: 415 SKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474
+ K G +GDVG++HPDG++EIKDRSKD+IISGGENISS E+E+++Y +P V E AV
Sbjct: 414 YEAFKHGWLNSGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENIIYKYPKVLETAV 473
Query: 475 VGRPDPFWQEIPCAFVSLKTGTDSG-----GMMTTEKDIIQYCRARIPRYMVPKTVVFID 529
V P P W E PCAFV L+ G + ++T E+D+I+YCR +P +M P+ VVF+D
Sbjct: 474 VAMPYPTWGETPCAFVVLEKGETNNEDREDKLVTKERDLIEYCRENLPHFMCPRKVVFLD 533
Query: 530 ELPKTATGKVQKYVLGDIANSM 551
ELPK GK+ K L DIA +
Sbjct: 534 ELPKNGNGKILKPKLRDIAKGL 555
>gi|255556324|ref|XP_002519196.1| AMP dependent ligase, putative [Ricinus communis]
gi|223541511|gb|EEF43060.1| AMP dependent ligase, putative [Ricinus communis]
Length = 564
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 265/563 (47%), Positives = 363/563 (64%), Gaps = 23/563 (4%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L AN LTPL F+ERAAT ++++ Y+W QTY RC +LAS+L++
Sbjct: 5 IDDLPKLQANYTALTPLWFLERAATVHPTRTAVVHGSERYSWLQTYHRCRRLASALNNRN 64
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD-- 118
I G V+VIAPNIPA+YE HF VPM+GA+ NT+N RLDA TI+ +L HS S +V VD
Sbjct: 65 IGAGSTVAVIAPNIPALYEAHFGVPMAGAVLNTVNIRLDAPTIAFLLGHSRSTVVMVDQE 124
Query: 119 --HLSSS---LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPA--DFVDTYEN 171
HL+ +L E + F P P L++I D+ S P ++ A YE
Sbjct: 125 YFHLAEGAFKILAEKENNFSP----PLLIVIADE------SCDPKQLQHALKRGAIEYEK 174
Query: 172 MLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQS 231
L GDP+F+W P+ + + L YT GTT++PKGVV ++ +++A+ + W + + +
Sbjct: 175 FLENGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVLSHRGAYLMALSCAMIWGLNEGA 234
Query: 232 VLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL 291
V LWTLPMFH NGW +TW A + TN+CLR+ A V++ I GVTH C AP+VLN +
Sbjct: 235 VYLWTLPMFHCNGWCYTWSLAALCGTNICLRQVTAKAVYSAIANQGVTHFCAAPVVLNTI 294
Query: 292 SSSPEAKQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKP 348
++P+ + L R V + TAG+ PP +L GF V+H YG +E G + CAWKP
Sbjct: 295 VNAPKEEAILPLPRVVHVNTAGAAPPPSLLFAMSEKGFRVTHTYGLSETYGPSTVCAWKP 354
Query: 349 KWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYL 408
+W+ LP ++A L ARQGVR IGL +D+VD +T V DG+T GEIVMRG +M GYL
Sbjct: 355 EWDSLPPIKQARLNARQGVRYIGLEGLDVVDTKTNKPVPADGKTMGEIVMRGNLVMKGYL 414
Query: 409 KDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPM 468
K+PEA + +G +++GD+ + HPDGY+EIKDR+KD+IISGGENISS E+E+VLY+HP
Sbjct: 415 KNPEANKEAFANGWFHSGDLAVKHPDGYIEIKDRNKDIIISGGENISSLEVENVLYTHPA 474
Query: 469 VNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFI 528
V E +VV R D W E PCAFV+LK GTD +DI+++C++++P Y VPK+VVF
Sbjct: 475 VFEVSVVAREDERWGESPCAFVTLKEGTDKSDEGRLAEDIMKFCKSKMPAYWVPKSVVF- 533
Query: 529 DELPKTATGKVQKYVLGDIANSM 551
LPKTATGK+QK+VL D A M
Sbjct: 534 GPLPKTATGKIQKHVLRDKAKKM 556
>gi|297834588|ref|XP_002885176.1| acyl-activating enzyme 7 [Arabidopsis lyrata subsp. lyrata]
gi|297331016|gb|EFH61435.1| acyl-activating enzyme 7 [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/560 (46%), Positives = 356/560 (63%), Gaps = 16/560 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L PAN LTPL F++RAA S+I+ YTW QTY RC +LAS+L+
Sbjct: 12 IDDLPKIPANYTALTPLWFLDRAAMVHPTRKSVIHGSREYTWRQTYDRCRRLASALADRS 71
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I PG V++IAPNIPAMYE HF VPM GA+ N +N RL+A+T++ +L HS+S ++ VD
Sbjct: 72 IGPGSTVAIIAPNIPAMYEAHFGVPMCGAVLNCVNIRLNAQTVAFLLSHSQSSVIMVDQE 131
Query: 121 SSSLLLEVVSLFPPHS----KTPKLVLITDDKEISSSSSPPP--RIPPADFVDTYENMLA 174
+L E + L + K P L++I D + PP I + YE+ LA
Sbjct: 132 LFTLAEESLRLMEEKAGSSFKRPLLIVIGDQ------TCPPESLNIALSKGAVEYEDFLA 185
Query: 175 KGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLL 234
GDP + W P + + L YT GTT++PKGVV ++ +++A+ + + W + + V L
Sbjct: 186 TGDPNYPWQPPADEWQSIALGYTSGTTASPKGVVLHHRGAYVMALSNPLIWGMQEGCVYL 245
Query: 235 WTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS 294
WTLPMFH NGW F W AV+ T++CLR+ A V++ I K+ VTH C AP+VLN + ++
Sbjct: 246 WTLPMFHCNGWCFPWSLAVLSGTSICLRQVSAKEVYSKIVKYKVTHFCAAPVVLNTIVNA 305
Query: 295 PEAKQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWN 351
P+ L V ++TAG+ PP VL GF V+H YG +E G + CAWKP+W+
Sbjct: 306 PKEDTILPLPHTVHVMTAGAAPPPSVLFSMNQKGFRVAHTYGLSETYGPSTVCAWKPEWD 365
Query: 352 KLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDP 411
LP +A L ARQGVR G+ ++D++D +TG V DG+T GEIV RG +M GYLK+P
Sbjct: 366 SLPPEAQAKLNARQGVRYTGMEQLDVIDTQTGKPVPADGKTAGEIVFRGNMVMKGYLKNP 425
Query: 412 EATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNE 471
EA + G +++GD+ + HPD Y+EIKDRSKDVIISGGENISS E+E+V+Y HP V E
Sbjct: 426 EANKETFAGGWFHSGDIAVKHPDNYIEIKDRSKDVIISGGENISSVEVENVVYHHPAVLE 485
Query: 472 AAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDEL 531
A+VV RPD WQE PCAFV+LK+G + +DI+++CR ++P Y VPK+VVF L
Sbjct: 486 ASVVARPDERWQESPCAFVTLKSGYEKQDHNKLAQDIMRFCREKLPAYWVPKSVVF-GPL 544
Query: 532 PKTATGKVQKYVLGDIANSM 551
PKTATGK+QK++L A M
Sbjct: 545 PKTATGKIQKHILRTKAKEM 564
>gi|255556322|ref|XP_002519195.1| AMP dependent ligase, putative [Ricinus communis]
gi|223541510|gb|EEF43059.1| AMP dependent ligase, putative [Ricinus communis]
Length = 565
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 255/556 (45%), Positives = 363/556 (65%), Gaps = 9/556 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL F++RAAT S+++ T YTW QTY+RC +LAS+L++
Sbjct: 6 IDELPKNAANYTALTPLLFLDRAATVHPSRVSLVHGSTHYTWLQTYKRCRRLASALTNHS 65
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ G V++IAPN+PAMYE HF VPM+GA+ N +N RL+A T++ +L HS+S++V VD
Sbjct: 66 VGFGSTVAIIAPNVPAMYEAHFGVPMAGAVVNCVNIRLNASTVAFLLGHSKSEVVMVDQE 125
Query: 121 SSSLLLEVVSLFPPHSKT--PKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP 178
SL E + + + P L+++ DK S + YE L GDP
Sbjct: 126 FFSLAEEALEILAKSESSFKPALLIVIADKSCDPKSL---KHALGRGAIEYEKFLESGDP 182
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
+F+W +P+ + + L YT GTT++PKGVV ++ +++++ + + W + + +V LWTLP
Sbjct: 183 EFAWKQPEDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSNPLIWGMNEGAVYLWTLP 242
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK 298
MFH NGW FTW A + TN+CLR+ A V++ I +GV+H CGAP+VLN + ++P+ +
Sbjct: 243 MFHCNGWCFTWSLAALCGTNICLRQVTAKAVYSAIANNGVSHFCGAPVVLNTIVNAPKEE 302
Query: 299 Q---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
L R V ++TAG+ PP VL GF V+H YG +E G + CAWKP+W+ P
Sbjct: 303 TILPLPRIVHVMTAGAAPPPSVLFAMSEKGFRVTHTYGLSETYGPSTVCAWKPEWDSQPP 362
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
+A L ARQGVR IGL +D+VDP+T V DG+T GEIVMRG +M GYLK+P+A
Sbjct: 363 IVQARLNARQGVRYIGLEGLDVVDPKTMKPVPADGKTIGEIVMRGNIVMKGYLKNPKANE 422
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
+ +G +++GD+ + HPD Y+EIKDRSKD+IISGGENISS E+E++LY+HP V EA+VV
Sbjct: 423 EAFANGWFHSGDLAVKHPDNYMEIKDRSKDIIISGGENISSLEVENILYTHPAVYEASVV 482
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
RPD W E PCAFV+LK G + +++I++ R+++P Y VPK+VVF LPKTA
Sbjct: 483 ARPDEQWGESPCAFVTLKPGVNRSDERYLAEELIKFSRSKMPAYWVPKSVVF-GPLPKTA 541
Query: 536 TGKVQKYVLGDIANSM 551
TGK+QK+VL A M
Sbjct: 542 TGKIQKHVLRARAKEM 557
>gi|326505982|dbj|BAJ91230.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 659
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 266/553 (48%), Positives = 360/553 (65%), Gaps = 26/553 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTY-TWSQTYRRCLQLASSLSS-FGINPGHV 66
AN PLTPL FIERAA D +++Y + TW + RC+++A++L++ FG+ G V
Sbjct: 111 ANYAPLTPLSFIERAAAVYGDRAAVVYGEARRRTWREVRERCVRVAAALATRFGVARGDV 170
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL- 125
V+V++PN+PAMYELHFAVPM+GA+ T NTR DA +S +LKHS +K+ V+ SSLL
Sbjct: 171 VAVLSPNVPAMYELHFAVPMAGAVLCTFNTRHDAAMVSALLKHSGAKVFLVE---SSLLD 227
Query: 126 -----LEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
L+ ++ P + P LV+++DD S AD+ YE ++ +F
Sbjct: 228 IGKAALKRLADQPNAASIPFLVIMSDDAGSGEDSGCA-----ADY--DYEGLIKNAPSKF 280
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
P ++LDP+ LNYT GTTS PKGVV ++ ++ + +++ + + LWT+PMF
Sbjct: 281 DVRWPANELDPITLNYTSGTTSRPKGVVYNHRGAYLNTIGTVLAYDITPMPTYLWTVPMF 340
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGW WG A+ G TNVCLR F A +F I ++GVTHM GAP VLN++ ++P A +
Sbjct: 341 HCNGWHLPWGVAMQGGTNVCLRHFTAGVIFDSIARNGVTHMGGAPTVLNMIVNAPAADRR 400
Query: 301 DRP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
P VR++T G+PPP VL E LGF+V H YG TE G C W P+W+ LPA ER
Sbjct: 401 LLPGTVRVMTGGAPPPPRVLAGMEELGFVVYHIYGLTETHGPATVCTWMPEWDTLPAEER 460
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A LKARQG I + EVD+ DP T SV RDG+ GE++ RG ++M GY +D +AT + M
Sbjct: 461 ARLKARQGFHHIAMEEVDVKDPATMESVPRDGEAAGEVMFRGNTVMSGYYRDIDATKEAM 520
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
G +TGD+ + HPDGY+++KDR+KD+IISGGENISS E+ESV++SHP V EAAVV RP
Sbjct: 521 AGGWLHTGDLAVRHPDGYIQLKDRAKDIIISGGENISSIEVESVIFSHPAVLEAAVVARP 580
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
D W E PCAFV LK G + TE II +CR R+P YM PKTVVF ++LPKT+TGK
Sbjct: 581 DEHWGETPCAFVKLKDGARA-----TEAGIIGFCRERMPHYMAPKTVVF-EDLPKTSTGK 634
Query: 539 VQKYVLGDIANSM 551
QK+VL + A +M
Sbjct: 635 TQKFVLREKARAM 647
>gi|380042374|gb|AFD33351.1| acyl-activating enzyme 7 [Cannabis sativa]
Length = 597
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 264/555 (47%), Positives = 360/555 (64%), Gaps = 18/555 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ L AN PL+P+GF+ER++ A D S+IY TYTW QTY+RCL+LASSL+ G
Sbjct: 53 MEGLVQCSANHVPLSPIGFLERSSKAYRDNTSLIYGSITYTWLQTYQRCLKLASSLTQLG 112
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD-H 119
I+PG VV+ + N+P +YELHFAVPM+G I T+N R D+ +S +L HSE+KL+FV+
Sbjct: 113 ISPGDVVATFSYNLPEIYELHFAVPMAGGILCTLNARHDSAMVSTLLAHSEAKLIFVEPQ 172
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
L + L + L K P LVL+TD + +SSS Y N+L G
Sbjct: 173 LLETALGALDLLAQKDIKPPILVLLTDFESFTSSS-----------YHNYNNLLENGSYD 221
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F RPKS+ DP+ +NYT GTT+APK VV ++ ++ ++ +++ + + V LW++PM
Sbjct: 222 FEVRRPKSEWDPISINYTSGTTAAPKAVVYTHRGAYLNSIATVLLHGMGTRPVYLWSVPM 281
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK- 298
FH NGW WGAA GATN+C+RK +F I H VTH AP VLN++ +SP+
Sbjct: 282 FHCNGWCLPWGAAAQGATNICIRKVFPKAIFDNIHLHKVTHFGAAPTVLNMIVNSPKDNI 341
Query: 299 --QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
L V I+T GSPPP V+ R E +GF V+H YG TE G +C KP+W+ LP
Sbjct: 342 HLPLPHMVEIMTGGSPPPPQVMARMEEMGFRVNHIYGLTETYGPATNCVCKPEWDALPPE 401
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
ER +LKARQG+ + + E+D+ D T SVK DG+T GE++ RG ++M GY KD +AT +
Sbjct: 402 ERYALKARQGLNHLAMEEMDVKDSVTMESVKADGKTIGEVMFRGNTVMSGYFKDLKATEE 461
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
+ G + +GDVG+ H DGY+++KDR KDV+ISGGEN+S E+E+VLYSH V EAAVV
Sbjct: 462 AFEGGWFCSGDVGVKHEDGYIQLKDRKKDVVISGGENVSPVEVETVLYSHEPVLEAAVVA 521
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
RPD W E PCAFV LK G D+ + + II++CR R+P YM PKTVVF ++LPKT+T
Sbjct: 522 RPDKLWGETPCAFVPLKEGFDNNNV--SVDHIIKFCRDRLPHYMAPKTVVF-EDLPKTST 578
Query: 537 GKVQKYVLGDIANSM 551
GK+QKY L + A +M
Sbjct: 579 GKIQKYFLKEKARAM 593
>gi|448746987|ref|ZP_21728651.1| AMP-dependent synthetase/ligase [Halomonas titanicae BH1]
gi|445565497|gb|ELY21607.1| AMP-dependent synthetase/ligase [Halomonas titanicae BH1]
Length = 542
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 257/544 (47%), Positives = 345/544 (63%), Gaps = 18/544 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+PL FIER+A+ D P++++ T TWS+T+ RC QLAS+L GI PG V+
Sbjct: 14 ANHVPLSPLTFIERSASIYPDYPAVVHGSTRRTWSETWSRCRQLASALEKRGIQPGQTVA 73
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PNIPAM+E HF VP++G + NT+N RLDA IS +L+H E+K + VD + ++ +
Sbjct: 74 AMLPNIPAMFEAHFGVPLAGCVLNTLNIRLDAEAISYMLEHGEAKAILVDPEFAEVIQQA 133
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
V+ + P L++ D E + I YE +L +GD F++ P +
Sbjct: 134 VAKL---THKP-LIIDVADVEFLGETQGIGEI-------EYEALLNEGDTNFAYQLPGDE 182
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + LNYT GTT PKGVV ++ ++ AV ++++W +P + LWTLPMFH NGW F
Sbjct: 183 WDAISLNYTSGTTGKPKGVVYHHRGAYLNAVSNIMEWAMPHHPIYLWTLPMFHCNGWCFP 242
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRI 306
W A NVCLR+ D + LI + VTH GAPI+LN L + P + Q D PV++
Sbjct: 243 WTIAANAGVNVCLRRVDPKKIMQLIAEEKVTHFSGAPIILNGLVNLPAEDKHQFDHPVKV 302
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
TAG+ PPA V+ E LG V+H YG TE+ G CAW+ W++LP RA +KARQG
Sbjct: 303 TTAGAAPPASVIAGVEKLGIEVTHVYGLTEVYGPVTVCAWREAWDELPLEARAKIKARQG 362
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
VR L + + DP T V +DGQT GEI+MRG ++M GYLK+PEAT + ++ G Y+TG
Sbjct: 363 VRYHMLEALCVADPLTMEPVPKDGQTMGEILMRGNNVMKGYLKNPEATEQALEGGWYHTG 422
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+ + HPDGY+EIKDRSKD+IISGGENIS+ E+E +Y HP V EAAVV +PD W E P
Sbjct: 423 DLAVWHPDGYIEIKDRSKDIIISGGENISTIEVEDAIYGHPAVEEAAVVAKPDEKWGETP 482
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546
CAFV LK G TE DII +CR + Y VPKTV+F ELPKT+TGK+QK+VL +
Sbjct: 483 CAFVKLKVGYGE----VTEADIIAHCREHLAGYKVPKTVIF-SELPKTSTGKIQKFVLRE 537
Query: 547 IANS 550
A
Sbjct: 538 EAKQ 541
>gi|346991512|ref|ZP_08859584.1| acyl-CoA synthetase [Ruegeria sp. TW15]
Length = 542
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 260/550 (47%), Positives = 350/550 (63%), Gaps = 19/550 (3%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L PAN PL+PL ++ER A D PS++Y + Y+W++TY R +LAS+L+ G+
Sbjct: 10 HLDKTPANFTPLSPLSYLERTAAVYPDYPSVVYGERRYSWAETYARSRRLASALTMRGVG 69
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G VS+IA NIP +YE HF VPM+GA+ N INTRLDA I+ IL H+E+K++ VD S
Sbjct: 70 VGDTVSIIAANIPELYEAHFGVPMAGAVLNAINTRLDAPIIAFILNHAEAKVLLVDPEFS 129
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
VV L LV+ +D R+ D TYE++LA+GDP+F W
Sbjct: 130 G----VVKLALEQVDHDLLVIDIEDDSFDGGE----RL--GDL--TYESLLAEGDPEFEW 177
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P + D + LNYT GTT PKGVV ++ + A +++ W +P+ SV LWTLPMFH
Sbjct: 178 SLPADEWDAITLNYTSGTTGNPKGVVYHHRGAALNATSNILTWGMPQHSVYLWTLPMFHC 237
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA-KQLD 301
NGW F W A T+VCLR ++ R+ GVTH CGAPIVLN+L+++P+ +
Sbjct: 238 NGWCFPWTMAANAGTSVCLRAVRDEPIYRAFREEGVTHFCGAPIVLNMLANAPDHLRDFT 297
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+ ++ +TAG+PPPA V+ E +G V+H YG TE G +V CAWK +WN+ A +RA+L
Sbjct: 298 QQIKAMTAGAPPPAKVIEAMEGMGVEVTHVYGLTETYGPSVVCAWKDEWNEKGAEDRAAL 357
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K RQGV+ + L+ + + DPET V DG+T GEI M+G +M GYLK+ EAT K K G
Sbjct: 358 KVRQGVKYVALSGLMVADPETMEPVPSDGETMGEIFMQGNIVMKGYLKNAEATDKAFKGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GD+G+MHPDGY+ +KDRSKD+IISGGENISS E+E LY HP V EAAVV RPD
Sbjct: 418 WFASGDLGVMHPDGYIALKDRSKDIIISGGENISSVEVEDTLYKHPAVMEAAVVARPDEK 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK ++ E +II +CR + + PKTVVF LPKT+TGK+QK
Sbjct: 478 WGETPCAFVELKPQAEA-----NEAEIIAFCRDHMAHFKAPKTVVF-GALPKTSTGKIQK 531
Query: 542 YVLGDIANSM 551
++L D A +
Sbjct: 532 FILRDRAREL 541
>gi|359787153|ref|ZP_09290219.1| acyl-CoA synthetase [Halomonas sp. GFAJ-1]
gi|359295535|gb|EHK59800.1| acyl-CoA synthetase [Halomonas sp. GFAJ-1]
Length = 543
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 258/549 (46%), Positives = 350/549 (63%), Gaps = 18/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P AN L+PL FIER+A+ D P++++ T TWS+T+ RC QLAS+L GI P
Sbjct: 10 LSPTAANHVALSPLTFIERSASVYPDFPAVVHGSTRRTWSETWTRCRQLASALEKRGIQP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM+E HF VP++G + NT+N RLDA IS +L H E+K + VD +
Sbjct: 70 GQTVAAMLPNIPAMFEAHFGVPLAGCVLNTLNIRLDAEAISYMLSHGEAKAILVDPEFAG 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + V+L + P L++ D E + I YE +LA+GDP++++
Sbjct: 130 VINDAVALL---DEKP-LIIDVADVEFLGETQGIGEI-------EYEALLAEGDPEYAYQ 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ ++ AV ++++W +P V LWTLPMFH N
Sbjct: 179 LPSDEWQAISLNYTSGTTGKPKGVVYHHRGAYLNAVSNILEWAMPHHPVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLS--SSPEAKQLD 301
GW F W A +VCLRK D + LI VTH GAPI+LN L ++ + ++ D
Sbjct: 239 GWCFPWTIAANAGVSVCLRKVDPKRINDLIVDEKVTHFSGAPIILNGLVNLAADQKREFD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV++ TAG+ PPA V+ E LG V+H YG TE+ G CAW+ +WN+LP ERA +
Sbjct: 299 HPVKVTTAGAAPPASVIAGVEKLGIEVTHVYGLTEVYGPVTVCAWREEWNELPLEERAKI 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L + + DP + V +DGQT GEI+MRG ++M GYLK+P+AT+ ++ G
Sbjct: 359 KARQGVRYHMLEALCVADPVSMEPVAKDGQTIGEILMRGNNVMKGYLKNPDATANALEGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
Y+TGD+ + H DGY+EIKDRSKD+IISGGENIS+ E+E +YSHP V EAAVV +PD
Sbjct: 419 WYHTGDLAVWHADGYIEIKDRSKDIIISGGENISTIEVEDAIYSHPAVEEAAVVAKPDEK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK G TE DII +CR + Y VPKTV+F ELPKT+TGK+QK
Sbjct: 479 WGETPCAFVKLKIGYGE----VTEADIIAHCREHLAGYKVPKTVIF-SELPKTSTGKIQK 533
Query: 542 YVLGDIANS 550
+VL + A
Sbjct: 534 FVLREEAKQ 542
>gi|225457528|ref|XP_002270022.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Vitis vinifera]
Length = 566
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 263/555 (47%), Positives = 361/555 (65%), Gaps = 17/555 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+P+ F+ER+A+ D +I+Y +TW T RC +LAS+++ GI+ G VV+
Sbjct: 18 ANHVPLSPISFLERSASVYRDRVAIVYGRVKFTWRDTLERCTRLASAITHLGISRGDVVA 77
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL---SSSLL 125
+APNIPAMYELHF VPM+GA+ T+N R D+ +S +LKHSE+K++FVD+ ++
Sbjct: 78 ALAPNIPAMYELHFGVPMAGAVLCTLNIRHDSAMVSTLLKHSEAKMIFVDYQLLDTAQGA 137
Query: 126 LEVVSLFPPHSKTPKLVLITD-DKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
LE++S +K P+LVLI + DK + S+ P + D YE ++A G F
Sbjct: 138 LEILS--KTRTKLPRLVLIPECDKLQPTISNSGPTVA-GDL--EYETLIAMGKTDFDIRW 192
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
P + DP+ LNYT GTTS PKGV+ ++ + ++ +++ + V LWT+PMFH NG
Sbjct: 193 PNDEWDPIALNYTSGTTSRPKGVIYSHRGAHLNSLAAVLLNEMGSMPVYLWTVPMFHCNG 252
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP- 303
W TWG A G TNVCLR A +F I +H VTHM GAP VLN++ ++P Q P
Sbjct: 253 WCLTWGVAAQGGTNVCLRNVTAKGIFDSISQHRVTHMGGAPTVLNMIINAPVGDQRPLPG 312
Query: 304 -VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
V ++T G+PPP VL + LGF V H YG TE G C WKP+W+ LP ++A +
Sbjct: 313 KVAVMTGGAPPPPQVLFNMKELGFGVFHSYGLTETYGPGTVCTWKPEWDLLPPDKQAKIN 372
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
ARQG+ +G+ EVDI DP T SV D +T GE++ RG ++M GYLKD +AT + K G
Sbjct: 373 ARQGLHHLGMEEVDIKDPVTMKSVPPDAKTIGEVMFRGNTVMNGYLKDIKATEESFKGGW 432
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
+ +GD+G+ HPDGY+E+KDRSKD+IISGGENIS+ E+E+VL+SHP + EAAVVGRPD W
Sbjct: 433 FRSGDLGVKHPDGYIELKDRSKDIIISGGENISTIEVEAVLFSHPAILEAAVVGRPDDHW 492
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E PCAFV LK G ++ +II++CR ++P YM PKTVVF D LPKT+TGK QKY
Sbjct: 493 GETPCAFVKLKEGCNANA-----NEIIKFCRNKLPHYMAPKTVVFYD-LPKTSTGKTQKY 546
Query: 543 VLGDIANSMSMSHSR 557
+L + A +M R
Sbjct: 547 ILKEKAKAMGSLSKR 561
>gi|346990424|gb|AEO52693.1| cinnamic acid:CoA ligase [Petunia x hybrida]
Length = 570
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 267/569 (46%), Positives = 367/569 (64%), Gaps = 32/569 (5%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD L AN PLTPL F+ RA + + SIIY +TW QTY+RC +LASSL S
Sbjct: 1 MDELPKCGANYVPLTPLTFLTRAFKSYANRTSIIYAGARFTWEQTYKRCCRLASSLQSLN 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH- 119
I VVSV+APN+PA YE+HFAVPM+GA+ NTINTRLD I+IILKHSE+KL+FVD+
Sbjct: 61 IVKNDVVSVLAPNVPATYEMHFAVPMAGAVLNTINTRLDPMNIAIILKHSEAKLLFVDYE 120
Query: 120 ------LSSSLLLEVVSLFPPHSKT---PKLVLITDDKEISSSSSPPPRIPPADFVDTYE 170
+ LL+ + +SK P+++LI D P RI D ++ YE
Sbjct: 121 YLEKARKALELLMSTNFITAQNSKKISMPQVILIDD-------LYSPTRIQQQDQLE-YE 172
Query: 171 NMLAKGDPQFSWVRPKS----DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWV 226
++ +G+P+++ P++ + DP+VLNYT GTTS PKGVV ++ F+ +++++ W
Sbjct: 173 QLVHQGNPEYA---PENIVDDEWDPIVLNYTSGTTSEPKGVVYSHRGAFLSTLNTIMGWE 229
Query: 227 VPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPI 286
+ + V LW+LPMFH NGW+ TWG A G TNVC+R A +++ I H VTHMC AP
Sbjct: 230 MGTEPVYLWSLPMFHINGWTLTWGIAARGGTNVCIRNTTAQEIYSNITLHKVTHMCCAPT 289
Query: 287 VLN-LLSSSP-EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSC 344
V N LL + P E +++ PV+++ G+PPP ++ + E LGF V H YG TE G + C
Sbjct: 290 VFNILLEAKPHERREITTPVQVMVGGAPPPTTLIGKIEELGFHVVHCYGITEAGGTTLVC 349
Query: 345 AWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLM 404
W+ +WNKL ++A+LKARQG+ + L +VD+ + +T SV +G+T GEI +RG S+M
Sbjct: 350 EWQSEWNKLSREDQANLKARQGISVLALEDVDVKNSKTMQSVPHNGKTMGEICLRGSSIM 409
Query: 405 LGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLY 464
GY K+ +A S+ K+G + TGDV ++H DGYLEIKDR KD+IISGGENISS E+E+ +
Sbjct: 410 KGYFKNDKANSQVFKNGWFLTGDVAVIHQDGYLEIKDRCKDIIISGGENISSIEVENAIL 469
Query: 465 SHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKT 524
HP V EAAVV P P W E PCAFV +KT E DII +C+ +P +MVPK
Sbjct: 470 KHPSVIEAAVVAMPHPRWGETPCAFV-IKTKNPE----IKEADIIVHCKKELPGFMVPKH 524
Query: 525 VVFIDELPKTATGKVQKYVLGDIANSMSM 553
V F++ELPKT TGKV+K L ++A S +
Sbjct: 525 VQFLEELPKTGTGKVKKLQLREMAKSFGI 553
>gi|356495772|ref|XP_003516747.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Glycine max]
Length = 555
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 260/550 (47%), Positives = 364/550 (66%), Gaps = 21/550 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI--NPGHV 66
AN P+TP+ F+ERAA A D S+++ D TYTW+QT++RC++LASS+S G+ +P HV
Sbjct: 9 ANYVPVTPISFLERAAVAYRDNISVVFGDITYTWAQTHQRCIKLASSISQLGVCLSPRHV 68
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFV-----DHLS 121
V+V+APN+PAMYELHFAVPMSGA+ T+NTR D+ +S +LK +E+KLVFV D
Sbjct: 69 VAVLAPNVPAMYELHFAVPMSGAVLCTLNTRHDSEMVSTLLKQTEAKLVFVYYQLLDIAQ 128
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
++L + + +K P LVLI S P P P A TYE+++AKG +F
Sbjct: 129 AALEILSKTTTTTTTKLPLLVLI------SECGHPSP--PHAKGTLTYEDLIAKGTLEFE 180
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
RPK +LDP+ ++ T GTT+ PK V+ ++ ++ A+ S+I + V LW +PMFH
Sbjct: 181 VRRPKDELDPITISSTSGTTANPKSVIYSHRGVYLNALVSIILNEMRSMPVYLWCVPMFH 240
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD 301
NGW W A G TNVCL A +F I +H VTHM GAP +LN++ +SP K L
Sbjct: 241 CNGWCIPWSIAAQGGTNVCLSSVTAEAIFDNIFRHKVTHMGGAPTILNMIINSPLRKPLS 300
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V ++T G+PPP V+ + E+LGF V+H YG TE G AWKP+W+ P +A L
Sbjct: 301 GKVAVMTGGAPPPPDVIFKMENLGFNVTHAYGSTEAYGPAAINAWKPEWDNQPRDAKAKL 360
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K RQGVR +G+ ++D+ DP T SV D +T GE++ RG ++M GYLK+ +AT + K G
Sbjct: 361 KTRQGVRHVGMEDLDVKDPHTMKSVPADAKTIGEVMFRGNTVMCGYLKNLKATQEAFKGG 420
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GD+G+ HPDGY+E++DRSKD II GGE++SS E+E+V++SHP V EA+VVGRPD +
Sbjct: 421 WFRSGDMGVKHPDGYIELRDRSKDTIICGGESVSSIELEAVIFSHPAVFEASVVGRPDDY 480
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK G + T +II +C+ R+P +M P+TV+F D LPKT+TGK QK
Sbjct: 481 WGETPCAFVKLKEGCSA-----TADEIILFCQNRLPPFMAPRTVLFAD-LPKTSTGKTQK 534
Query: 542 YVLGDIANSM 551
++L + A +M
Sbjct: 535 FLLREKAKAM 544
>gi|387813621|ref|YP_005429103.1| AMP-dependent synthetase/ligase [Marinobacter hydrocarbonoclasticus
ATCC 49840]
gi|381338633|emb|CCG94680.1| putative AMP-dependent synthetase/ligase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 542
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 265/551 (48%), Positives = 352/551 (63%), Gaps = 19/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+P AN +P+ FIER A+ D P+II+ TW++TY RCL+LAS+L GI
Sbjct: 9 LEPRDANYAVQSPIDFIERTASVYPDYPAIIHGAIRRTWAETYDRCLRLASALKGRGIGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM E HF +PM GA+ NT+N RLDA I+ +L+H E+K+V D
Sbjct: 69 GDTVAVMLPNIPAMVECHFGIPMIGAVLNTLNVRLDAEAIAFMLEHGEAKVVIADREFGQ 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + V H + LV+ DD E + +D YE L +GDPQF W
Sbjct: 129 VIKDAVR----HLEHKPLVIDVDDPEYGEG------VQVSDL--DYEAFLQEGDPQFQWS 176
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P ++ D + LNYT GTT PKGVV ++ +I A+ + W + V LWTLPMFH N
Sbjct: 177 FPDNEWDAISLNYTSGTTGNPKGVVYHHRGAYINALGNQTVWSMDMHPVYLWTLPMFHCN 236
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAKQ-LD 301
GW F W + T+VCLR+ D + LIR H VTHMCGAPIVLN LL++SPEAK +D
Sbjct: 237 GWCFPWTITAMAGTHVCLRRVDPEKILQLIRDHQVTHMCGAPIVLNALLNASPEAKAGID 296
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ +TAG+ PPA V+ E +G V+H YG TE+ G CAWK +W++LP +RA +
Sbjct: 297 HEVKSMTAGAAPPAQVIGSIEEMGIKVTHVYGLTEVYGPVTVCAWKSEWDELPLHDRAKI 356
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L + DP T V +DG+T GEI +RG ++M GYLK+P AT + + G
Sbjct: 357 KARQGVRYHTLGGTMVADPNTMQPVPKDGKTIGEIFLRGNTVMKGYLKNPTATEEAFRGG 416
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + H DGY+EIKDR KD+IISGGENIS+ E+E LY HP V EAAVV RPD
Sbjct: 417 WFHTGDLAVWHEDGYMEIKDRLKDIIISGGENISTIEVEDTLYRHPAVLEAAVVARPDEK 476
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK ++G + +E DII +CR + R+ VPKTVVF ELPKT+TGK+QK
Sbjct: 477 WGETPCAFITLK--PEAGDV--SEDDIINFCREHLARFKVPKTVVFT-ELPKTSTGKIQK 531
Query: 542 YVLGDIANSMS 552
+VL D A ++
Sbjct: 532 FVLRDQAKDLN 542
>gi|254509793|ref|ZP_05121860.1| acyl-CoA synthase [Rhodobacteraceae bacterium KLH11]
gi|221533504|gb|EEE36492.1| acyl-CoA synthase [Rhodobacteraceae bacterium KLH11]
Length = 542
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 257/551 (46%), Positives = 354/551 (64%), Gaps = 19/551 (3%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L PAN PL+PL +IER A D PS++Y + YTW+ TY RC +LAS+L G+
Sbjct: 10 HLDKTPANFTPLSPLSYIERTAAIYPDYPSVVYGERRYTWADTYARCRRLASALVRRGVG 69
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G VS+IA NIPA+YE HF VPM+GA+ N INTRLDA I+ IL H+E+K++ VD S
Sbjct: 70 AGDTVSIIAANIPALYEAHFGVPMAGAVLNAINTRLDAPIITFILNHAEAKVLLVDPEFS 129
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ + ++ LV+ +D + R+ AD TYE +LA+GDP+F+W
Sbjct: 130 GVVKQALA----QVDHDVLVIDIEDPDFDGGE----RL--ADL--TYEALLAEGDPEFNW 177
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P + D + LNYT GTT PKGVV ++ + A +++ W +P+ S+ LWTLPMFH
Sbjct: 178 SLPGDEWDAITLNYTSGTTGNPKGVVYHHRGAALNATSNILTWGMPQHSIYLWTLPMFHC 237
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA-KQLD 301
NGW F W A T+VCLR ++ R GVTH CGAPIVLN+L+++P+ +
Sbjct: 238 NGWCFPWTMAANAGTSVCLRAVRDVPIYRAFRDEGVTHFCGAPIVLNMLANAPDHLRDFS 297
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+ ++++TAG+PPPA V+ E +G V+H YG TE G +V CAWK +WN+ +RA+L
Sbjct: 298 QQIKVMTAGAPPPAKVIEAMEGMGIEVTHVYGLTETYGPSVVCAWKDEWNEQDPEDRAAL 357
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K RQGV+ + L+ + + DP+T V DG+T GEI M+G +M GYLK+P+AT K G
Sbjct: 358 KIRQGVKYVALSGLMVADPKTLQPVPADGETMGEIFMQGNIVMKGYLKNPDATDKAFNGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GD+G+MHPDGY+ +KDRSKD+IISGGENISS E+E +LY HP V EAAVV RPD
Sbjct: 418 WFASGDLGVMHPDGYIALKDRSKDIIISGGENISSVEVEDILYKHPAVMEAAVVARPDEK 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK ++ + +II +CR + + PKTVVF LPKT+TGK+QK
Sbjct: 478 WGETPCAFVELKPQAEA-----SADEIIAFCRDNMAHFKAPKTVVF-GALPKTSTGKIQK 531
Query: 542 YVLGDIANSMS 552
+ L D A ++
Sbjct: 532 FKLRDQARDLT 542
>gi|255539206|ref|XP_002510668.1| AMP dependent ligase, putative [Ricinus communis]
gi|223551369|gb|EEF52855.1| AMP dependent ligase, putative [Ricinus communis]
Length = 551
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 258/555 (46%), Positives = 366/555 (65%), Gaps = 21/555 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ + AN PL+P+ F+ER+A A D SI+Y D YTW +T++RC++LAS+L G
Sbjct: 1 MEGMIKCSANYVPLSPISFLERSAIAYRDSISIVYGDVKYTWRETHQRCIKLASALVHLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
IN G VV+ +APNIPA+YELHF VPM+GA+ T+N R D+ +S++L+HSE+K++FVDH
Sbjct: 61 INRGDVVAALAPNIPALYELHFGVPMAGAVLCTLNVRHDSAMVSVLLRHSEAKVIFVDHQ 120
Query: 121 SSSLL---LEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD 177
+ LE++S +K P VL+ + + P I + ++ +E++LA G
Sbjct: 121 FLQIAQGALEILSKLG--TKLPMFVLVQECGQ-------PTPISSSGHLE-FESLLAMGK 170
Query: 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
F RP + DP+ LNYT GTTS+PKGV+ ++ ++ ++ +++ + + LW +
Sbjct: 171 LDFEVRRPNDECDPISLNYTSGTTSSPKGVIYSHRGAYLNSLAAVLLNDMVSMPIYLWCV 230
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
PMFH NGW TWG A G T+VCLR +F I ++ VTHM GAP VLN++ ++P +
Sbjct: 231 PMFHCNGWCLTWGVAAQGGTHVCLRSVSPKGIFENIARYKVTHMGGAPTVLNMIINAPAS 290
Query: 298 KQLDRP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
Q P V ++T +PPP VL E LGF V+H YG TE G C WKP+W LP
Sbjct: 291 DQKPLPGKVAVMTGAAPPPPRVLFAMEELGFNVTHSYGLTETYGPGTVCTWKPEWTSLPR 350
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
+A +KARQG++ +G+ EVDI DP T SV D +T GE++ RG ++M GYLK+ AT
Sbjct: 351 DVQAKIKARQGLQHLGIEEVDIKDPVTMKSVPPDAKTIGEVMFRGNTVMNGYLKNLRATE 410
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
+ K G + +GD+G+ HPDGY+E+KDRSKD+IISGGENIS+ E+ESVL+SHP V EAAVV
Sbjct: 411 EAFKGGWFRSGDLGVKHPDGYIELKDRSKDIIISGGENISTIEVESVLFSHPAVLEAAVV 470
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
G PD W E PCAFV LK G ++ + +++I+YCR +P YM P+TV+F ++LPKT+
Sbjct: 471 GSPDDHWGETPCAFVKLKDGCNA-----SAQELIKYCRDHLPHYMAPRTVLF-EDLPKTS 524
Query: 536 TGKVQKYVLGDIANS 550
TGKVQKYVL A++
Sbjct: 525 TGKVQKYVLRKKASA 539
>gi|414864658|tpg|DAA43215.1| TPA: putative AMP-dependent synthetase and ligase superfamily
protein [Zea mays]
Length = 644
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 266/553 (48%), Positives = 360/553 (65%), Gaps = 34/553 (6%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSS-FGINPGHVV 67
AN PL+P+ FIERAA P+++Y D +TW++T RCL++A++L++ FGI G VV
Sbjct: 104 ANHAPLSPISFIERAAAVYGARPAVVYGDRRHTWAETRGRCLRVAAALATRFGIARGDVV 163
Query: 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLE 127
+V++PN+PAMYELHFAVPM+GA+ T+NTR DA +S++LKHS +K+ V+ S LL+
Sbjct: 164 AVLSPNVPAMYELHFAVPMAGAVLCTLNTRHDAAMVSVLLKHSGAKVFLVE----SNLLD 219
Query: 128 V-----VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
V L +S VL+T I D YE+++ G +F
Sbjct: 220 VGRAAMKRLAESNSAAALPVLLT--------------ISDDTDSDDYEDLVRNGPARFDI 265
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P +LDP+ LNYT GTTS PKGVV ++ ++ + +++ + + LWT+PMFH
Sbjct: 266 RWPADELDPIALNYTSGTTSRPKGVVYSHRGAYLNTIATVLAYDITAMPTYLWTVPMFHC 325
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLS----SSPEAK 298
NGW+ WG A+ G TNVCLR F +F I +HGVTHM GAP VLN+++ ++ E K
Sbjct: 326 NGWNLPWGVAMQGGTNVCLRHFTGEVIFDSITRHGVTHMGGAPTVLNMMANARTATAERK 385
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
L PVR++T G+PPP VL E LGF+V YG TE G C W P+W+ LPA ER
Sbjct: 386 PLPWPVRVMTGGAPPPPRVLFAVEELGFVVYQIYGLTETYGPATVCTWMPEWDALPAEER 445
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A LKARQG + + +VD+++P T SV DGQT GE++ RG ++M GY KD +AT + M
Sbjct: 446 ARLKARQGFHHVAMQDVDVMNPSTMESVPHDGQTVGEVMFRGNTVMSGYYKDLKATKESM 505
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
G +TGD+ + HPDGY++IKDR+KD+IISGGENISS E+ESV++SHP V EAAVV RP
Sbjct: 506 AGGWLHTGDLAVRHPDGYIQIKDRAKDIIISGGENISSIEVESVIFSHPAVLEAAVVARP 565
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
D W E PCAFV LK G + TE +II +CR ++P YM PKTVVF ++LPKT+TGK
Sbjct: 566 DHHWGETPCAFVKLKDGASA-----TEAEIINFCREKLPHYMAPKTVVF-EDLPKTSTGK 619
Query: 539 VQKYVLGDIANSM 551
QK+VL D A +M
Sbjct: 620 TQKFVLRDKARAM 632
>gi|226508754|ref|NP_001147787.1| acyl-activating enzyme 11 [Zea mays]
gi|195613764|gb|ACG28712.1| acyl-activating enzyme 11 [Zea mays]
gi|414864595|tpg|DAA43152.1| TPA: putative AMP-dependent synthetase and ligase superfamily
protein [Zea mays]
Length = 578
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 267/558 (47%), Positives = 357/558 (63%), Gaps = 20/558 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD+L PAN PL+P+GF+ RA D S+IY +TW QTY RC +LAS+L S G
Sbjct: 1 MDQLPKRPANYVPLSPVGFLPRANAVYGDRTSVIYRGVRFTWRQTYARCRRLASALLSLG 60
Query: 61 I-NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
+ G VVSV+APN+PAMYE+HFAVPM+GA+ NTINTRLDA ++ IL+HS +KL FVD+
Sbjct: 61 VVRRGDVVSVLAPNVPAMYEMHFAVPMAGAVLNTINTRLDAAAVATILRHSGAKLFFVDY 120
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
L + + L + LV + DD + + R+ + YE +LA GDP
Sbjct: 121 DYVRLASDALRLL--DAADVPLVAVIDDIHSPTGA----RLGELE----YEALLAHGDPD 170
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
+ + D + L+YT GTTSAPKGVV ++ ++ L+ W VP + V LWTLPM
Sbjct: 171 ADLPPLQDEWDAVTLSYTSGTTSAPKGVVYSHRGAYLSTTSLLLQWGVPAEPVYLWTLPM 230
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL-----SSS 294
FH NGW+FTWG A G NVC+R ++ I +H VTHMC AP+V ++L S
Sbjct: 231 FHCNGWTFTWGMAARGGVNVCIRDARPADIYRAIARHRVTHMCCAPVVFSILLDGDGDSD 290
Query: 295 PEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLP 354
A+QL PV +LT G+PPPA +L R E +GF V+H YG TE G ++C W+ +W++LP
Sbjct: 291 GAARQLQAPVHVLTGGAPPPAALLERVERIGFNVTHAYGLTEATGPALACEWRDQWDRLP 350
Query: 355 ARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEAT 414
ERA LKARQGV + L + D+ + +T LSV RDG+T GEIV+RG S+M GYL +PEA
Sbjct: 351 LPERARLKARQGVSVLSLADADVKNADTMLSVPRDGRTVGEIVLRGSSVMKGYLNNPEAN 410
Query: 415 SKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474
+ G + TGDVG++HPDGY+EIKDRSKDVIISGGENI S E+E VL+ HP V +AAV
Sbjct: 411 ESAFRAGWFLTGDVGVVHPDGYIEIKDRSKDVIISGGENICSKELEEVLFRHPAVADAAV 470
Query: 475 VGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKT 534
V P P W E PCAFV + D ++ +E D++ +C R+ R+MVPK V + LP+
Sbjct: 471 VAMPHPRWGETPCAFVVPR---DKAAVL-SEGDVLAFCSKRMARFMVPKKVEVVGALPRN 526
Query: 535 ATGKVQKYVLGDIANSMS 552
A GKV+K L + A ++
Sbjct: 527 ALGKVEKVKLREAARKLA 544
>gi|186473716|ref|YP_001861058.1| AMP-dependent synthetase and ligase [Burkholderia phymatum STM815]
gi|184196048|gb|ACC74012.1| AMP-dependent synthetase and ligase [Burkholderia phymatum STM815]
Length = 550
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 255/551 (46%), Positives = 355/551 (64%), Gaps = 20/551 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+DR + AN PLTPLGF++R A + +I++ TW+QT RC + ASSL++ G
Sbjct: 10 LDRCE---ANHLPLTPLGFLDRVAQVHPNHLAIVHGQFKQTWAQTRERCYRFASSLAARG 66
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G VS+IAPN PA+ E HF VP++GA+ N IN RLD ++ IL+HSE KL+ VD
Sbjct: 67 ITRGDTVSIIAPNTPALLEAHFGVPLAGAVLNAINYRLDPEGVAFILRHSECKLLLVDRE 126
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
+SL E ++ +P V+ +D S P + D YE+++ +GDP +
Sbjct: 127 FASLAAEALTRL----DSPPTVIDIEDYMAPSG----PSVGETD----YESLIDQGDPSY 174
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+P ++ +P+ LNYT GTT PKGVV ++ +++++ + +W +P++ V LWTLPMF
Sbjct: 175 EGNKPNNEWEPIALNYTSGTTGDPKGVVASHRGTYLMSLLQMTNWAMPRKPVYLWTLPMF 234
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGW FTW T+VCLRK +A VFA I + + H+C APIVL ++S K+L
Sbjct: 235 HANGWCFTWAITAAAGTHVCLRKVNAENVFAEIENYPIDHLCAAPIVLAGIASGAAGKKL 294
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
RPVR+LTAGSPPP VL +GF V H +G TE++G VSC W+ W+ LP E+A
Sbjct: 295 SRPVRVLTAGSPPPVAVLKSVAEIGFDVDHVFGITEVSGTPVSCVWQDDWDTLPVPEQAR 354
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
+ARQGVR + ++ + DP T L V RDG+T GEI+MRG ++M+GYLK+P+AT +
Sbjct: 355 KRARQGVRAVVFEDLIVADPATLLPVPRDGRTAGEIMMRGNTVMMGYLKNPKATQHAFEG 414
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G + TGDV ++H DGY++I DRSKDVIISGGENISS E+E VL++HP V AAVV +PD
Sbjct: 415 GWFRTGDVAVVHEDGYVQITDRSKDVIISGGENISSVEVEDVLHTHPSVFLAAVVAQPDE 474
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV L+ +T ++I+ +CR R+ Y P+ VVF D LPKTATGKVQ
Sbjct: 475 KWGEVPCAFVELR----PDARQSTAEEIVAFCRERLAHYKCPRRVVFSD-LPKTATGKVQ 529
Query: 541 KYVLGDIANSM 551
K+ L ++A S
Sbjct: 530 KFRLRELARSQ 540
>gi|357112581|ref|XP_003558087.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Brachypodium
distachyon]
Length = 567
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 259/566 (45%), Positives = 361/566 (63%), Gaps = 13/566 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL F+ERAA A S+++ YTW+ TY RC +LAS+L+
Sbjct: 7 IDELPKNAANHTALTPLWFLERAALAHPGRASLVHGSLRYTWADTYSRCRRLASALARRS 66
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ G V+VIAPNIPA+YE HF VPM+GA+ N +N RL+A T++ +L+HS +++V VD
Sbjct: 67 VGHGSTVAVIAPNIPAIYEAHFGVPMAGAVVNCVNIRLNAPTVAFLLEHSSAEVVMVDQE 126
Query: 121 SSSLLLEVVSLFPPHSK----TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG 176
SL + + + K P LV+I D S+ R + YE L G
Sbjct: 127 FFSLAEDSLRIIADQKKGSFKQPLLVVIGDHTCDPSALQNALRKGAIE----YEKFLETG 182
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
DP+F+W P+ + + L YT GTTS PKGVV ++ +++++ ++ W + + +V LWT
Sbjct: 183 DPEFAWKPPQDEWKSIALGYTSGTTSNPKGVVLHHRGAYLMSLSGVLVWGMNEGAVYLWT 242
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
LPMFH NGW +TW A + TN+CLR+ A +F+ I GVTH C APIVLN + ++P
Sbjct: 243 LPMFHCNGWCYTWALAAICGTNICLRQVTAKAIFSAIASQGVTHFCAAPIVLNAIINAPP 302
Query: 297 AKQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKL 353
A L R V ++TAG+ PP VL LGF V+H YG +E G + CAWKP+W+ L
Sbjct: 303 ADTILPLPRVVDVMTAGAAPPPSVLASMSKLGFRVTHTYGLSETYGPSTVCAWKPEWDSL 362
Query: 354 PARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
PA ERA L ARQG+R +G+ +D+VDP++ V DG T GEIVMRG ++M GYLK+P+A
Sbjct: 363 PADERARLHARQGIRYVGMEGLDVVDPKSMAPVPADGSTLGEIVMRGNAVMKGYLKNPKA 422
Query: 414 TSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
++ ++G +++GD+G+ HPDGY+E+KDR+KD+IISGGENISS E+E +Y HP V EA+
Sbjct: 423 NAEAFENGWFHSGDLGVRHPDGYIEVKDRAKDIIISGGENISSLEVEKAVYLHPAVLEAS 482
Query: 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPK 533
VV R D W E PCAF++LK G D +I+ +CR R+P Y VPK+VVF LPK
Sbjct: 483 VVARSDEQWGESPCAFITLKDGVDGSNEAALAGNIMSFCRERLPGYWVPKSVVF-GPLPK 541
Query: 534 TATGKVQKYVLGDIANSMS-MSHSRM 558
TATGK++K+ L A + + SRM
Sbjct: 542 TATGKIKKHELRAKAKELGPVRKSRM 567
>gi|357481325|ref|XP_003610948.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
gi|355512283|gb|AES93906.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
Length = 548
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 261/546 (47%), Positives = 355/546 (65%), Gaps = 20/546 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTP+ F+ER+A D SIIY D TYTWSQT++RC++LASS+S G++P VV+
Sbjct: 9 ANYVPLTPISFLERSAIVYSDKVSIIYGDVTYTWSQTHQRCIKLASSISQLGVSPNDVVA 68
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL--- 125
V+A NIPA YEL FAVPMSGA+ T+NT D+ +S++L H ++K++FVDH +
Sbjct: 69 VLAHNIPATYELQFAVPMSGAVLCTLNTHQDSSMVSLLLNHCDAKILFVDHQLFDIAKGA 128
Query: 126 LEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRP 185
LE++S +K P LVLI D E +S SS YEN++A+G F RP
Sbjct: 129 LEILS--KSTTKLPILVLILDSDENTSVSSNTL---------IYENLIAEGKLDFEVRRP 177
Query: 186 KSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGW 245
K + D + ++YT GTTS PKGV+ ++ ++ ++ ++I + SV LW +PM+H NGW
Sbjct: 178 KDECDTISISYTSGTTSTPKGVIFSHRGAYLNSLATIIINEMKSTSVYLWCVPMYHCNGW 237
Query: 246 SFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVR 305
W A G TNVCLR +F I KH VTHM GAP +LN+L +SP K L V
Sbjct: 238 CVPWSIAAQGGTNVCLRNVTDKDIFDNIFKHNVTHMGGAPALLNMLINSPIRKPLSGKVV 297
Query: 306 ILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
+++ G+PPP + E LGF V+H YG TE G C WKP+W LP +A ++ RQ
Sbjct: 298 VMSGGAPPPPDIFSSAEELGFHVTHAYGMTETYGPASICTWKPEWASLPPDAQAKMRVRQ 357
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYT 425
GV+ +G+ E+DI DP T SV D +T GE++ RG ++M GYLKD +AT + G + T
Sbjct: 358 GVQHVGMDELDIKDPATMKSVPADAKTIGEVMFRGNNVMNGYLKDLKATQDAFEGGWFRT 417
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+G+ H DGY+E+ DR+ DV+ISGGENIS+ ++E V++SHP V EAAVVGRPD +W E
Sbjct: 418 GDMGVKHTDGYIEVTDRATDVVISGGENISTIQLEGVIFSHPAVFEAAVVGRPDEYWGET 477
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLG 545
PCAFV LK G ++ TE++IIQ C+ +P +M P+TVVF D LPKT+TGK QKYVL
Sbjct: 478 PCAFVKLKEGYNA-----TEEEIIQLCQKHLPSFMAPQTVVFGD-LPKTSTGKTQKYVLR 531
Query: 546 DIANSM 551
A +M
Sbjct: 532 GKAKAM 537
>gi|359393556|ref|ZP_09186609.1| Medium-chain-fatty-acid--CoA ligase [Halomonas boliviensis LC1]
gi|357970803|gb|EHJ93248.1| Medium-chain-fatty-acid--CoA ligase [Halomonas boliviensis LC1]
Length = 585
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 254/546 (46%), Positives = 346/546 (63%), Gaps = 18/546 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+PL FIER+A+ D P++++ T TWS+T+ RC QLAS+L GI PG V+
Sbjct: 56 ANHVPLSPLTFIERSASIYPDYPAVVHGSTRRTWSETWSRCRQLASALEKRGIQPGQTVA 115
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PNIPAM+E HF VP++G + NT+N RLDA IS +L+H E+K + VD + ++ +
Sbjct: 116 AMLPNIPAMFEAHFGVPLAGCVLNTLNIRLDAEAISYMLEHGEAKAILVDPEFAEVIQQA 175
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
V+ + P ++ + D + + + YE +L +GD F++ P +
Sbjct: 176 VAKL---THKPLIIDVADVEFLGETHGIGEL--------EYEALLNEGDADFAYQLPADE 224
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + LNYT GTT PKGVV ++ ++ AV ++++W +P + LWTLPMFH NGW F
Sbjct: 225 WDAISLNYTSGTTGKPKGVVYHHRGAYLNAVSNIMEWAMPHHPIYLWTLPMFHCNGWCFP 284
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRI 306
W A NVCLR+ D + LI + VTH GAPI+LN L + P + Q D PV++
Sbjct: 285 WTIAANAGVNVCLRRVDPKKIMQLIAEERVTHFSGAPIILNGLVNLPAEDKHQFDHPVKV 344
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
TAG+ PPA V+ E LG V+H YG TE+ G CAW+ W++LP RA +KARQG
Sbjct: 345 TTAGAAPPASVIAGVEKLGIEVTHVYGLTEVYGPVTVCAWRETWDELPLEARAKIKARQG 404
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
VR L + + DP T V +DGQT GEI+MRG ++M GYLK+PEAT + ++ G Y+TG
Sbjct: 405 VRYHMLEALCVADPLTLEPVPKDGQTMGEILMRGNNVMKGYLKNPEATEQALEGGWYHTG 464
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+ + HPDGY+EIKDRSKD+IISGGENIS+ E+E +Y HP V EAAVV +PD W E P
Sbjct: 465 DLAVWHPDGYIEIKDRSKDIIISGGENISTIEVEDAIYGHPAVEEAAVVAKPDEKWGETP 524
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546
CAFV LK G T+ DII +CR + Y VPKTV+F ELPKT+TGK+QK+VL +
Sbjct: 525 CAFVKLKVGYGE----VTDADIIAHCREHLAGYKVPKTVIF-SELPKTSTGKIQKFVLRE 579
Query: 547 IANSMS 552
A S
Sbjct: 580 EAKQHS 585
>gi|218192654|gb|EEC75081.1| hypothetical protein OsI_11224 [Oryza sativa Indica Group]
Length = 585
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 256/553 (46%), Positives = 354/553 (64%), Gaps = 12/553 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL F+ERAA D ++++ YTW++TYRRC +LAS+L+
Sbjct: 14 IDDLPRNDANYTALTPLWFLERAAVVHPDRAAVVHGPVRYTWAETYRRCRRLASALAQRS 73
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ PG V+VIAPN+PA+YE HF VPMSGA+ N +N RL+A TI+ +L HS +++V VD
Sbjct: 74 VGPGCTVAVIAPNVPALYEAHFGVPMSGAVVNCVNIRLNAETIAFLLDHSVAEVVMVDQE 133
Query: 121 SSSLLLEVVSLFPPHSK----TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG 176
+L E + + K P L++I D + P + YE L G
Sbjct: 134 FFTLAEESLKILAEKKKWSFRPPILIVIGD----PTCDPKPLQYALGRGAIEYEEFLKTG 189
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
DP+F+W PK + + L YT GTTS+PKGVV ++ +++A+ + W +P+ +V LWT
Sbjct: 190 DPEFAWKPPKDEWQSIALGYTSGTTSSPKGVVLHHRGAYVMALGVAMVWGMPEGAVYLWT 249
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
LPMFH NGW +TW A + TN+CLR+ + +++ I HGVTHMC AP+V N L ++P
Sbjct: 250 LPMFHCNGWCYTWAMAAMCGTNICLRQVSSKAIYSGIVNHGVTHMCAAPVVFNNLINAPA 309
Query: 297 AKQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKL 353
++ L R V I+ AG+ P +L GF V+H YG +E G + CAWKP+W++L
Sbjct: 310 SETFLPLPRVVNIMVAGAAPTPSLLAALSIRGFRVTHTYGLSETYGPSTVCAWKPEWDRL 369
Query: 354 PARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
P ER+ L RQGVR L +D+VDP+T V DG++ GEIVMRG ++M GYLK+P+A
Sbjct: 370 PLEERSRLHCRQGVRYGALEGLDVVDPKTMAPVAADGKSYGEIVMRGNAVMKGYLKNPKA 429
Query: 414 TSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
++ G Y++GD+G+ HPDGY+E+KDR KD+IISGGENISS E+E VLY+HP V EA+
Sbjct: 430 NAEAFAGGWYHSGDLGVKHPDGYIEVKDRMKDIIISGGENISSLEVEKVLYAHPAVLEAS 489
Query: 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPK 533
VV R D W E PCAFV+LK G DS DI+++CR R+P Y VPK+VVF LP
Sbjct: 490 VVARADEQWGESPCAFVTLKEGADSSDEAAVAGDIMRFCRERMPGYWVPKSVVF-GPLPM 548
Query: 534 TATGKVQKYVLGD 546
TATGK++K+ D
Sbjct: 549 TATGKIKKHETED 561
>gi|120555009|ref|YP_959360.1| acyl-CoA synthetase [Marinobacter aquaeolei VT8]
gi|120324858|gb|ABM19173.1| AMP-dependent synthetase and ligase [Marinobacter aquaeolei VT8]
Length = 542
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 264/551 (47%), Positives = 351/551 (63%), Gaps = 19/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+P AN +P+ FIER A+ D P+II+ TW++TY RCL+LAS+L GI
Sbjct: 9 LEPRDANYAVQSPIDFIERTASVYPDYPAIIHGAIRRTWAETYDRCLRLASALKGRGIGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM E HF +PM GA+ NT+N RLDA I+ +L+H E+K+V D
Sbjct: 69 GDTVAVMLPNIPAMVECHFGIPMIGAVLNTLNVRLDAEAIAFMLEHGEAKVVIADREFGQ 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + V H + LV+ DD E + +D YE L +GDPQF W
Sbjct: 129 VIKDAVR----HLEHKPLVIDVDDPEYGEG------VQVSDL--DYEAFLQEGDPQFQWS 176
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P ++ D + LNYT GTT PKGVV ++ +I A+ + W + V LWTLPMFH N
Sbjct: 177 FPDNEWDAISLNYTSGTTGNPKGVVYHHRGAYINALGNQTVWSMDMHPVYLWTLPMFHCN 236
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAKQ-LD 301
GW F W + T+VCLR+ D + LI H VTHMCGAPIVLN LL++SPEAK +D
Sbjct: 237 GWCFPWTITAMAGTHVCLRRVDPEKILQLIHDHQVTHMCGAPIVLNALLNASPEAKAGID 296
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ +TAG+ PPA V+ E +G V+H YG TE+ G CAWK +W++LP +RA +
Sbjct: 297 HEVKSMTAGAAPPAQVIGSIEEMGIKVTHVYGLTEVYGPVTVCAWKSEWDELPLHDRAKI 356
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L + DP T V +DG+T GEI +RG ++M GYLK+P AT + + G
Sbjct: 357 KARQGVRYHTLGGTMVADPNTMQPVPKDGKTIGEIFLRGNTVMKGYLKNPTATEEAFRGG 416
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + H DGY+EIKDR KD+IISGGENIS+ E+E LY HP V EAAVV RPD
Sbjct: 417 WFHTGDLAVWHEDGYMEIKDRLKDIIISGGENISTIEVEDTLYRHPAVLEAAVVARPDEK 476
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK ++G + +E DII +CR + R+ VPKTVVF ELPKT+TGK+QK
Sbjct: 477 WGETPCAFITLK--PEAGDV--SEDDIINFCREHLARFKVPKTVVFT-ELPKTSTGKIQK 531
Query: 542 YVLGDIANSMS 552
+VL D A ++
Sbjct: 532 FVLRDQAKDLN 542
>gi|15218839|ref|NP_176763.1| benzoyloxyglucosinolate 1 [Arabidopsis thaliana]
gi|75313812|sp|Q9SS01.1|AAE20_ARATH RecName: Full=Benzoate--CoA ligase, peroxisomal; AltName:
Full=Acyl-activating enzyme 20; AltName: Full=Protein
BENZOYLOXYGLUCOSINOLATE 1
gi|6227013|gb|AAF06049.1|AC009513_5 Similar to gb|X94625 amp-binding protein from Brassica napus and is
a member of the PF|00501 AMP-binding enzymes
[Arabidopsis thaliana]
gi|332196315|gb|AEE34436.1| benzoyloxyglucosinolate 1 [Arabidopsis thaliana]
Length = 580
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 261/564 (46%), Positives = 359/564 (63%), Gaps = 21/564 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD L AN+ PLTP+ F++RA+ + SIIY T +TW QTY RC +LA+SL S
Sbjct: 1 MDDLALCEANNVPLTPMTFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLISLN 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I+ VVSV+APN PA+YE+HFAVPM+GA+ N INTRLDA +I+ IL+H++ K++F+D
Sbjct: 61 ISKNDVVSVMAPNTPALYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFLDRS 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD-TYENMLAKGDPQ 179
+L E + L L +I + P R A F + YE ++ +G+P
Sbjct: 121 FEALARESLHLLSSEDSNLNLPVI-----FIHENDFPKR---ASFEELDYECLIQRGEPT 172
Query: 180 FSWV----RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLW 235
S V R + + DP+ LNYT GTT+ PKGVV ++ ++ + ++I W + V LW
Sbjct: 173 PSMVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLCTLSAIIGWEMGTCPVYLW 232
Query: 236 TLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SS 293
TLPMFH NGW+FTWG A G T+VC+R AP ++ I H VTHMC P V N+L +
Sbjct: 233 TLPMFHCNGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGN 292
Query: 294 SPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKL 353
S + PV +LT GSPPPA ++ + + LGF V H YG+TE G + C W+ +WN+L
Sbjct: 293 SLDLSPRSGPVHVLTGGSPPPAALVKKVQRLGFQVMHAYGQTEATGPILFCEWQDEWNRL 352
Query: 354 PARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
P ++ LKARQG+ +GL +VD+ + ET S RDG+T GEI+++G S+M GYLK+P+A
Sbjct: 353 PENQQMELKARQGISILGLADVDVKNKETQKSAPRDGKTMGEILIKGSSIMKGYLKNPKA 412
Query: 414 TSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
T + K G TGDVG++HPDG++EIKDRSKD+IISGGENISS E+E+VLY +P V E A
Sbjct: 413 TFEAFKHGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLYKYPKVLETA 472
Query: 474 VVGRPDPFWQEIPCAFVSLKTGTDS------GGMMTTEKDIIQYCRARIPRYMVPKTVVF 527
VV P P W E PCAFV L+ + T E+++I+YCR +P +M P+ VVF
Sbjct: 473 VVAMPHPTWGETPCAFVVLEKSETTIKEDRVDKFQTRERNLIEYCRENLPHFMCPRKVVF 532
Query: 528 IDELPKTATGKVQKYVLGDIANSM 551
++ELPK GK+ K L DIA +
Sbjct: 533 LEELPKNGNGKILKPKLRDIAKGL 556
>gi|352103599|ref|ZP_08959951.1| acyl-CoA synthetase [Halomonas sp. HAL1]
gi|350599284|gb|EHA15375.1| acyl-CoA synthetase [Halomonas sp. HAL1]
Length = 542
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 256/544 (47%), Positives = 344/544 (63%), Gaps = 18/544 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+PL FIER+A+ D P++++ T TW Q++ RC QLAS+L GI PG V+
Sbjct: 14 ANHVPLSPLTFIERSASIYPDYPAVVHGSTRRTWGQSWARCRQLASALQQRGIQPGQTVA 73
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PNIPAM+E HF VP++G + NT+N RLDA IS +L+H E+K + VD + ++ +
Sbjct: 74 AMLPNIPAMFEAHFGVPLAGCVLNTLNIRLDAEAISYMLEHGEAKAILVDPEFAEVIQQA 133
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
V+ + P L++ D E + I YE +L +GD F++ P +
Sbjct: 134 VAKL---THKP-LIIDVADVEFLGDTQGIGEI-------EYEALLNEGDANFAYQLPADE 182
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + LNYT GTT PKGVV ++ ++ AV ++++W +P + LWTLPMFH NGW F
Sbjct: 183 WDAISLNYTSGTTGKPKGVVYHHRGAYLNAVSNIMEWAMPHHPIYLWTLPMFHCNGWCFP 242
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRI 306
W A NVCLR+ D + LI + VTH GAPI+LN L + P + Q D PV++
Sbjct: 243 WTIAANAGVNVCLRRVDPKKIMQLIAEEKVTHFSGAPIILNGLVNLPAEDKCQFDHPVKV 302
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
TAG+ PPA V+ E LG V+H YG TE+ G CAW+ W++LP RA +KARQG
Sbjct: 303 TTAGAAPPASVISGVEKLGIEVTHVYGLTEVYGPVTVCAWREAWDELPLEARAKIKARQG 362
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
VR L + + DP T V +DGQT GEI+MRG ++M GYLK+PEAT + + G Y+TG
Sbjct: 363 VRYHMLEALCVADPLTMEPVPKDGQTMGEILMRGNNVMKGYLKNPEATEQALDGGWYHTG 422
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+ + HPDGY+EIKDRSKD+IISGGENIS+ E+E +Y HP V EAAVV +PD W E P
Sbjct: 423 DLAVWHPDGYIEIKDRSKDIIISGGENISTIEVEDAIYGHPAVEEAAVVAKPDEKWGETP 482
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546
CAFV LK G TE DII +CR + Y VPKTV+F ELPKT+TGK+QK+VL +
Sbjct: 483 CAFVKLKVGYGE----VTEADIIAHCREHLAGYKVPKTVIF-SELPKTSTGKIQKFVLRE 537
Query: 547 IANS 550
A +
Sbjct: 538 EAKN 541
>gi|326489302|dbj|BAK01634.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 567
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 258/566 (45%), Positives = 363/566 (64%), Gaps = 13/566 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL F+ERAA A S+++ YTW+ TYRRC +LAS+L+
Sbjct: 7 IDDLPRNAANYTALTPLWFLERAALAHPARASVVHGAVRYTWADTYRRCRRLASALARRS 66
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ G V+VIAPNIPA+YE HF VPM+GA+ N +N RL+A T++ +L+HS +++V VD
Sbjct: 67 VAHGSTVAVIAPNIPAIYEAHFGVPMAGAVVNCVNIRLNAPTVAFLLEHSSAEVVMVDQE 126
Query: 121 SSSLLLEVVSLFPPHSKT----PKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG 176
SL + + + K P +++I D S+ R + YE L G
Sbjct: 127 FFSLAEDSLRIIADQKKCSFKKPLVIVIGDHTCDPSALQDALRTGAIE----YEKFLETG 182
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
DP+F+W P+ + + L YT GTTS+PKGVV ++ +++++ + W + +V LWT
Sbjct: 183 DPEFAWKPPQDEWKSIALGYTSGTTSSPKGVVLHHRGAYLMSLSGALVWKMNDGAVYLWT 242
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
LPMFH NGW +TW A + T++CLR+ A +F+ I GVTH CGAP+VLN + ++P
Sbjct: 243 LPMFHCNGWCYTWTLAAICGTSICLRQVTAKAIFSAIANQGVTHFCGAPVVLNTIINAPP 302
Query: 297 AKQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKL 353
L R V ++TAG+ PP VL LGF VSH YG +E G + CAWKP+W+ L
Sbjct: 303 VDTILPLPRVVDVMTAGAAPPPSVLAAMSKLGFRVSHTYGLSETYGPSTVCAWKPEWDIL 362
Query: 354 PARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
P ERA L++RQG+R +GL +D+VDP++ V DG T GEIVMRG ++M GYLK+P+A
Sbjct: 363 PDDERARLQSRQGIRYVGLEGLDVVDPKSMAPVPADGSTLGEIVMRGNAVMKGYLKNPKA 422
Query: 414 TSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
++ ++G +++GD+G+ HPDGY+E+KDR+KD+IISGGENISS E+E +Y HP V EA+
Sbjct: 423 NAEAFENGWFHSGDLGVRHPDGYIEVKDRAKDIIISGGENISSLEVEKAVYMHPAVLEAS 482
Query: 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPK 533
VV R D W E PCAFV+LK G DS ++I++CR R+P Y VPK+VVF LPK
Sbjct: 483 VVARADEQWGESPCAFVTLKDGVDSSDEAAMAANVIKFCRERLPGYWVPKSVVF-GPLPK 541
Query: 534 TATGKVQKYVLGDIANSMS-MSHSRM 558
TATGK++K+ L A + + SRM
Sbjct: 542 TATGKIKKHELRAKAKELGPVRKSRM 567
>gi|15228909|ref|NP_188316.1| acyl-activating enzyme 7 [Arabidopsis thaliana]
gi|75304477|sp|Q8VZF1.1|AEE7_ARATH RecName: Full=Acetate/butyrate--CoA ligase AAE7, peroxisomal;
AltName: Full=AMP-binding protein 7; Short=AtAMPBP7;
AltName: Full=Acetyl-CoA synthetase; AltName:
Full=Acyl-activating enzyme 7; AltName: Full=Butyryl-CoA
synthetase; AltName: Full=Protein ACETATE NON-UTILIZING
1
gi|20799723|gb|AAM28624.1|AF503766_1 adenosine monophosphate binding protein 7 AMPBP7 [Arabidopsis
thaliana]
gi|18086379|gb|AAL57649.1| AT3g16910/K14A17_3 [Arabidopsis thaliana]
gi|19699128|gb|AAL90930.1| AT3g16910/K14A17_3 [Arabidopsis thaliana]
gi|332642362|gb|AEE75883.1| acyl-activating enzyme 7 [Arabidopsis thaliana]
Length = 569
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 257/558 (46%), Positives = 355/558 (63%), Gaps = 12/558 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L PAN LTPL F++RAA S+I+ YTW QTY RC +LAS+L+
Sbjct: 9 IDDLPKIPANYTALTPLWFLDRAAVVHPTRKSVIHGSREYTWRQTYDRCRRLASALADRS 68
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I PG V++IAPNIPAMYE HF VPM GA+ N +N RL+A T++ +L HS+S ++ VD
Sbjct: 69 IGPGSTVAIIAPNIPAMYEAHFGVPMCGAVLNCVNIRLNAPTVAFLLSHSQSSVIMVDQE 128
Query: 121 SSSLLLEVVSLFPPHS----KTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG 176
+L + + L + K P L++I D S + R ++ YE+ LA G
Sbjct: 129 FFTLAEDSLRLMEEKAGSSFKRPLLIVIGDHTCAPESLN---RALSKGAIE-YEDFLATG 184
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
DP + W P + + L YT GTT++PKGVV ++ +I+A+ + + W + +V LWT
Sbjct: 185 DPNYPWQPPADEWQSIALGYTSGTTASPKGVVLHHRGAYIMALSNPLIWGMQDGAVYLWT 244
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
LPMFH NGW F W AV+ T++CLR+ A V+++I K+ VTH C AP+VLN + ++P+
Sbjct: 245 LPMFHCNGWCFPWSLAVLSGTSICLRQVTAKEVYSMIAKYKVTHFCAAPVVLNAIVNAPK 304
Query: 297 AKQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKL 353
L V ++TAG+ PP VL GF V+H YG +E G + CAWKP+W+ L
Sbjct: 305 EDTILPLPHTVHVMTAGAAPPPSVLFSMNQKGFRVAHTYGLSETYGPSTVCAWKPEWDSL 364
Query: 354 PARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
P +A L ARQGVR G+ ++D++D +TG V DG+T GEIV RG +M GYLK+PEA
Sbjct: 365 PPETQAKLNARQGVRYTGMEQLDVIDTQTGKPVPADGKTAGEIVFRGNMVMKGYLKNPEA 424
Query: 414 TSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
+ G +++GD+ + HPD Y+EIKDRSKDVIISGGENISS E+E+V+Y HP V EA+
Sbjct: 425 NKETFAGGWFHSGDIAVKHPDNYIEIKDRSKDVIISGGENISSVEVENVVYHHPAVLEAS 484
Query: 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPK 533
VV RPD WQE PCAFV+LK+ + +DI+++CR ++P Y VPK+VVF LPK
Sbjct: 485 VVARPDERWQESPCAFVTLKSDYEKHDQNKLAQDIMKFCREKLPAYWVPKSVVF-GPLPK 543
Query: 534 TATGKVQKYVLGDIANSM 551
TATGK+QK++L A M
Sbjct: 544 TATGKIQKHILRTKAKEM 561
>gi|149374522|ref|ZP_01892296.1| acyl-CoA synthase [Marinobacter algicola DG893]
gi|149361225|gb|EDM49675.1| acyl-CoA synthase [Marinobacter algicola DG893]
Length = 542
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 258/550 (46%), Positives = 349/550 (63%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+P AN L+P+ FIER A+ D P++I+ YTW QTY RC +LAS+LSS GI
Sbjct: 9 LEPVGANHSVLSPIDFIERTASVYPDYPAVIHGAIRYTWGQTYERCRRLASALSSRGIGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM E HF VPM GA+ NT+N RLDA I+ +L+H+E+K+V D
Sbjct: 69 GDTVAAMLPNIPAMVECHFGVPMIGAVLNTLNVRLDAEAIAFMLEHAEAKVVVADREFGG 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + VS + LV+ DD E I +D YE L +GDP+F W
Sbjct: 129 VVRDAVSRL----DSKPLVIDVDDPEYGEG------IQMSDL--DYEAFLQEGDPEFQWN 176
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+++ D + LNYT GTT PKGVV ++ ++ ++ + W + + V LWTLPMFH N
Sbjct: 177 LPENEWDAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNQAVWSMGQHPVYLWTLPMFHCN 236
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W + T+VCLR+ D + LIR H VTHMCGAPIVLN L + PE+ + +D
Sbjct: 237 GWCFPWTVTAMAGTHVCLRRVDPEKILQLIRDHQVTHMCGAPIVLNALLNVPESAKAGID 296
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ +TAG+ PPA V+ E +G ++H YG TE+ G CAWK +W++ ERA++
Sbjct: 297 HEVKAMTAGAAPPAQVIGAIEEMGIAITHVYGLTEVYGPVTVCAWKAEWDEKTLDERATI 356
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L + DP T V DG+T GEI +RG ++M GYLK+P+AT + + G
Sbjct: 357 KARQGVRYHTLAGTMVGDPSTMEPVPNDGKTIGEIFLRGNTVMKGYLKNPKATEEAFRGG 416
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + H DGY+EIKDR KD+IISGGENIS+ E+E LY HP V EAAVV RPD
Sbjct: 417 WFHTGDLAVWHEDGYMEIKDRLKDIIISGGENISTIEVEDTLYRHPAVLEAAVVARPDAK 476
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK +E+D+I +CR R+ R+ VPKT+VF D LPKT+TGK+QK
Sbjct: 477 WGETPCAFITLKPEASE----VSEEDLIDFCRERLARFKVPKTIVFTD-LPKTSTGKIQK 531
Query: 542 YVLGDIANSM 551
+VL D A +
Sbjct: 532 FVLRDQAKEL 541
>gi|449432900|ref|XP_004134236.1| PREDICTED: acetate/butyrate--CoA ligase AAE7, peroxisomal-like
[Cucumis sativus]
gi|449503854|ref|XP_004162208.1| PREDICTED: acetate/butyrate--CoA ligase AAE7, peroxisomal-like
[Cucumis sativus]
Length = 567
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 252/558 (45%), Positives = 359/558 (64%), Gaps = 12/558 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL FIERAA S+++ Y W QTY+RC +LAS+LS+
Sbjct: 7 IDDLPKNHANYTALTPLWFIERAALVHPSRLSVVHGSRRYNWRQTYQRCRRLASALSNRS 66
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G V++IAPNIPA+YE HF VPM+GA+ N +N RL+A+TIS +L HS S +V VD
Sbjct: 67 IGAGDTVAIIAPNIPAIYEAHFGVPMAGAVLNCVNIRLNAQTISFLLGHSASAVVMVDQE 126
Query: 121 SSSLLLEVVSLFPP----HSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG 176
L E +++ H K P L++I D+ + + + YE L G
Sbjct: 127 FFPLAEEALNILAAKGDGHYKPPLLIVIGDE----NCDPEALKYALSKGAIEYEKFLEIG 182
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
+P+++W P+ + + L YT GTT++PKGVV ++ +++++ + + W + + ++ LWT
Sbjct: 183 NPEYAWKPPEDEWQSITLGYTSGTTASPKGVVLSHRGAYVMSLSAGLVWGMNEGAIYLWT 242
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
LPMFH NGW +TW A + T++CLR+ A V++ I KH VTH C AP+VLN + ++P+
Sbjct: 243 LPMFHCNGWCYTWALAALCGTSICLRQVTAKAVYSAIAKHKVTHFCAAPVVLNTIVNAPK 302
Query: 297 AKQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKL 353
L V ++TAG+ PP VL GF ++H YG +E G + CAWKP+W+ L
Sbjct: 303 EDTILPLPHVVHVMTAGAAPPPSVLYAMSQKGFRITHTYGLSETYGPSTICAWKPEWDSL 362
Query: 354 PARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
P +A + ARQGVR +GL +D+V+ +T V DG+T GEIVMRG ++M GYLK+P+A
Sbjct: 363 PPEAQARMNARQGVRYVGLEGLDVVNTQTMQPVPSDGKTVGEIVMRGNAVMKGYLKNPKA 422
Query: 414 TSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
+ +G +++GD+G+ HPDGY+EIKDRSKD+IISGGENISS EIE+ LY HP + E +
Sbjct: 423 NKEAFANGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSVEIENTLYQHPAILEVS 482
Query: 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPK 533
VV R D W E PCAFV+LK+ D G +DI+++C++++P Y VPK+VVF ELPK
Sbjct: 483 VVARADERWGESPCAFVTLKSKIDKGDEQRMAEDIMKFCKSKMPAYWVPKSVVF-GELPK 541
Query: 534 TATGKVQKYVLGDIANSM 551
TATGKVQK++L A M
Sbjct: 542 TATGKVQKHLLRAKAKEM 559
>gi|297832382|ref|XP_002884073.1| AMP-dependent synthetase and ligase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297329913|gb|EFH60332.1| AMP-dependent synthetase and ligase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 596
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/556 (47%), Positives = 353/556 (63%), Gaps = 11/556 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ L +PAN PL+P+ F+ER+A D S+++ +TW QTY+RCL+LAS+L+ G
Sbjct: 44 MEGLLRSPANFSPLSPITFLERSAKVYRDRTSLVFGSVKHTWFQTYQRCLRLASALTHLG 103
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I+ G VV+ +APN+PAM+ELHFAVPM+G I +NTRLD T+S++L HSE+K++FVDH
Sbjct: 104 ISRGDVVAALAPNVPAMHELHFAVPMAGLILCPLNTRLDPSTLSVLLAHSEAKILFVDHQ 163
Query: 121 SSSLLLEVVSLFPPHSKTPK---LVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD 177
+ + L +T K LVLI+ + S F YE +L G+
Sbjct: 164 LLEIAHGALDLLAKSDRTRKSLKLVLISQSND-DGYDSSSSFASKYSFDYEYETLLKSGN 222
Query: 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
+F ++P+ + DP+ +NYT GTTS PKGVV ++ ++ ++ ++ + V LWT+
Sbjct: 223 TEFEIIKPRCEWDPISINYTSGTTSRPKGVVYSHRGAYLNSLATVFLHQMSVYPVYLWTV 282
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP-- 295
PMFH NGW WG A G TN+CLRK +F I H VTHM GAP VLN++ +SP
Sbjct: 283 PMFHCNGWCLIWGVAAQGGTNICLRKVSPKLIFKNIAMHKVTHMGGAPTVLNMIVNSPVT 342
Query: 296 EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
E K L V I+T GSPP +L + E LGF VSH YG TE G C WKP+W+ L
Sbjct: 343 EHKPLPHRVEIMTGGSPPLPQILAKMEELGFNVSHLYGLTETYGPGTHCVWKPEWDSLSL 402
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
ER LK+RQGV+ +GL +D+ DP T +V DG T GE++ RG ++M GY KD EAT
Sbjct: 403 EERTKLKSRQGVQHLGLEGLDVKDPVTMETVPDDGVTMGEVMFRGNTVMSGYFKDLEATR 462
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
K + +++GD+ + HPDGY+EIKDR KDVIISGGENISS E+E VL SH V EAAVV
Sbjct: 463 KAFEGDWFHSGDLAVKHPDGYIEIKDRLKDVIISGGENISSVEVERVLCSHQAVLEAAVV 522
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
RPD W + PC FV LK G D+ ++II +CR +P YM PKT+VF D +PKT+
Sbjct: 523 ARPDNHWGQTPCGFVKLKDGFDT----IKPEEIIGFCRDHLPHYMAPKTIVFAD-IPKTS 577
Query: 536 TGKVQKYVLGDIANSM 551
TGKVQKY+L A+ M
Sbjct: 578 TGKVQKYLLRKKADEM 593
>gi|242037043|ref|XP_002465916.1| hypothetical protein SORBIDRAFT_01g048050 [Sorghum bicolor]
gi|241919770|gb|EER92914.1| hypothetical protein SORBIDRAFT_01g048050 [Sorghum bicolor]
Length = 546
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 260/547 (47%), Positives = 354/547 (64%), Gaps = 25/547 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSS-FGINPGHVV 67
AN PL+P+ FIERAA P+++Y D +TW++T RCL++A++L++ FG+ G VV
Sbjct: 10 ANHAPLSPISFIERAAAVYGARPAVVYGDRRHTWAETRGRCLRVAAALATRFGVARGDVV 69
Query: 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLE 127
+V++PN+PAMYELHFAVPM+GA+ T NTR DA +S++LKHS +K+ V+ S LL+
Sbjct: 70 AVLSPNVPAMYELHFAVPMAGAVLCTFNTRHDAAMVSVLLKHSGAKVFLVE----SNLLD 125
Query: 128 VVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP-QFSWVRPK 186
V + E +S++ P D L + P +F P
Sbjct: 126 V-----------GRAALKRLGESNSAALPVLLTISDDTDSDDYEDLVRNAPDRFDIRWPA 174
Query: 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
+LDP+ LNYT GTTS PKGVV ++ ++ + +++ + + LWT+PMFH NGW+
Sbjct: 175 DELDPISLNYTSGTTSRPKGVVYSHRGAYLNTIATVLAYDITAMPTYLWTVPMFHCNGWN 234
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDRPV 304
WG A+ G TNVCLR F A +F I +HGVTHM GAP VLN+++++P A + L PV
Sbjct: 235 LPWGVAMQGGTNVCLRHFTAGVIFDSIARHGVTHMGGAPTVLNMIANAPPADRMPLPGPV 294
Query: 305 RILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
R++T G+PPP VL E LGF+V H YG TE G C W P+W+ LPA RA LKAR
Sbjct: 295 RVMTGGAPPPPRVLFAVEELGFVVYHIYGLTETYGPATVCTWMPEWDALPAEHRARLKAR 354
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYY 424
QG I + + D+ +P T V DG+T GE++ RG ++M GY KD +AT + M G +
Sbjct: 355 QGFHHIAMQDADVKNPTTMECVPHDGETVGEVMFRGNTVMSGYYKDLKATKESMAGGWLH 414
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
TGD+ + HPDGY+E+KDR+KD+IISGGENISS E+ESV++SHP V EAAVV RPD W E
Sbjct: 415 TGDLAVRHPDGYIELKDRAKDIIISGGENISSIEVESVIFSHPAVLEAAVVARPDDHWGE 474
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
PCAFV LK G + TE +II +CR R+P YM PKTVVF +++PKT+TGK QK+VL
Sbjct: 475 TPCAFVKLKDGASA-----TEAEIISFCRERLPHYMAPKTVVF-EDMPKTSTGKTQKFVL 528
Query: 545 GDIANSM 551
D A +M
Sbjct: 529 RDKARAM 535
>gi|449455591|ref|XP_004145536.1| PREDICTED: probable acyl-activating enzyme 1, peroxisomal-like
[Cucumis sativus]
gi|449512665|ref|XP_004164110.1| PREDICTED: probable acyl-activating enzyme 1, peroxisomal-like
[Cucumis sativus]
Length = 555
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 258/557 (46%), Positives = 361/557 (64%), Gaps = 18/557 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD AN PLTP+ F+ER+A D S++Y YTW T +RC +LAS+L G
Sbjct: 1 MDGSHRCSANYVPLTPISFLERSAAVYGDRISLVYGRVQYTWRDTLQRCTRLASALVRTG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G VV+ + PNIPAMYELHFAVPM+GA+ ++NTR DA +S +L HSE+K++ VD+
Sbjct: 61 IARGDVVAALVPNIPAMYELHFAVPMAGAVLCSLNTRHDAAMVSTLLSHSEAKIIVVDYQ 120
Query: 121 SSSLLLEVV-SLFPPHSKTPKLVLITDDKEISSSSSPPPRIP-PADFVD--TYENMLAKG 176
++ + ++ K P++V+I + + PP RI P ++ +E+ LA G
Sbjct: 121 LEHIVTGAIKAMSERKEKLPRVVIIQEYDQ------PPSRIDRPGSALEYLEFESFLASG 174
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
F RP+ +LDP+ LNYT GTTS PKGV+ ++ ++ ++ +++ + V LWT
Sbjct: 175 KLNFEIRRPRDELDPIALNYTSGTTSRPKGVIFSHRGAYLNSLSAVLLNDMCSLPVYLWT 234
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP- 295
+PMFH NGW TWG A TN+C R A +F I H VTHM GAP V N++ ++P
Sbjct: 235 VPMFHCNGWCLTWGVAAQSGTNICQRNVTAKEIFDNISLHKVTHMGGAPTVSNMIINAPI 294
Query: 296 -EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLP 354
E K L R V +++ G+PPP+ VL + ++LGF + H YG TE G C+WKP+W+ LP
Sbjct: 295 SEQKPLPREVTMMSGGAPPPSHVLYKLKALGFRIVHSYGLTETYGPATVCSWKPEWDSLP 354
Query: 355 ARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEAT 414
++A L +RQG++ IGL D+ DP T SV DG+T GE+++RG ++M GYLKD +AT
Sbjct: 355 QDKQAKLNSRQGLQHIGLEAADVKDPVTMESVPADGKTMGEVMLRGNTVMSGYLKDLKAT 414
Query: 415 SKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474
+ G + +GD+G+ HPDGY+E+KDRSKD+IISGGENIS+ E+ESVL+SHP V +AAV
Sbjct: 415 REAFNGGWFRSGDLGVKHPDGYIELKDRSKDIIISGGENISTIEVESVLFSHPSVLDAAV 474
Query: 475 VGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKT 534
VGRPD W E PCAFV LK G + TE +II++CR +P YM P++VVF D LPKT
Sbjct: 475 VGRPDDHWGETPCAFVKLKDGCSA-----TEGEIIKFCREHLPHYMAPRSVVFRD-LPKT 528
Query: 535 ATGKVQKYVLGDIANSM 551
+TGK QK++L A +M
Sbjct: 529 STGKTQKFILKKEAKAM 545
>gi|225431900|ref|XP_002276434.1| PREDICTED: medium-chain-fatty-acid--CoA ligase [Vitis vinifera]
Length = 567
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 256/553 (46%), Positives = 357/553 (64%), Gaps = 16/553 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL +ERAA + S+I+ YTW QTY+RC +LAS+LS +
Sbjct: 7 IDDLPKNAANYTALTPLWLLERAAVVHPNRKSVIHGSLQYTWLQTYQRCRRLASALSKYS 66
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G V++IAPNIPA YE HF VPMSGA+ N +N RL+A TI+ +L+HS + +V VD
Sbjct: 67 IGAGSTVAIIAPNIPAKYEAHFGVPMSGAVVNCVNIRLNAPTIAFLLEHSSAAVVMVDQE 126
Query: 121 SSSLLLEVVSLFPPHSKT----PKLVLITDDKEISSSSSPPPRIPPA--DFVDTYENMLA 174
L E + ++ SK P L++I D+ S P + A V YE L
Sbjct: 127 FFPLAEEALKIWSDKSKNDFKPPLLIVIADE------SCDPKALEYALRKGVIEYEQFLE 180
Query: 175 KGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLL 234
GDP+F+W P+ + + L YT GTT++PKGVV ++ +I+A+ + W + + +V L
Sbjct: 181 TGDPEFAWKPPQDEWQSIALGYTSGTTASPKGVVLHHRGAYIMALTGALVWGMNEGAVYL 240
Query: 235 WTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS 294
WTLPMFH NGW FTW A + TN+CLR+ + ++ I GVTH+C AP+VLN + ++
Sbjct: 241 WTLPMFHCNGWCFTWTLAALCGTNICLRQVETKAIYQAIANDGVTHLCAAPVVLNSIVNA 300
Query: 295 PEAKQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWN 351
P+++ L R V ++TAG+ PP VL GF V+H YG +E G + CAWKP+W+
Sbjct: 301 PKSETILPLPRVVHVMTAGAAPPPSVLFAMSQQGFRVTHTYGLSETYGPSTVCAWKPEWD 360
Query: 352 KLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDP 411
+LP +A L ARQGV+ IGL +D+V V DG T GEIVMRG ++M GYLK+P
Sbjct: 361 ELPPETQARLNARQGVQYIGLEGLDVVSTTDMKPVPADGTTIGEIVMRGNTVMKGYLKNP 420
Query: 412 EATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNE 471
+A + +G +++GD+G+ HPDGY+++KDRSKD+IISGGENISS E+E+ +Y HP V E
Sbjct: 421 KANEETFANGWFHSGDLGVKHPDGYIQLKDRSKDIIISGGENISSVEVENAVYLHPAVLE 480
Query: 472 AAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDEL 531
A+VV RPD W E PCAFV+LK G D +DI+++CR+++P Y +PK+VVF L
Sbjct: 481 ASVVARPDDRWGESPCAFVTLKPGVDRSDERRLAEDIMKFCRSKLPAYWIPKSVVF-GPL 539
Query: 532 PKTATGKVQKYVL 544
PKTATGK+QK++L
Sbjct: 540 PKTATGKIQKHLL 552
>gi|147854579|emb|CAN82780.1| hypothetical protein VITISV_017128 [Vitis vinifera]
Length = 567
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 257/553 (46%), Positives = 356/553 (64%), Gaps = 16/553 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL +ERAA + S+I+ YTW QTY+RC +LAS+LS +
Sbjct: 7 IDDLPKNAANYTALTPLWLLERAAVVHPNRKSVIHGSLQYTWLQTYQRCRRLASALSKYS 66
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G V++IAPNIPAMYE HF VPMSGA+ N +N RL+A TI+ +L+HS + +V VD
Sbjct: 67 IGAGSTVAIIAPNIPAMYEAHFGVPMSGAVVNCVNIRLNAPTIAFLLEHSSAAVVMVDQE 126
Query: 121 SSSLLLEVVSLFPPHSKT----PKLVLITDDKEISSSSSPPPRIPPA--DFVDTYENMLA 174
L E + ++ SK P L++I D+ S P + A V YE L
Sbjct: 127 FFPLAEEALKIWSGKSKNDFKPPLLIVIADE------SCDPKGLEYALRKGVIEYEQFLE 180
Query: 175 KGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLL 234
GDP+F+W P+ + + L YT GTT++PKGVV ++ +I+A+ + W + + +V L
Sbjct: 181 TGDPEFAWKPPQDEWQSIALGYTSGTTASPKGVVLHHRGAYIMALTGALVWGMNEGAVYL 240
Query: 235 WTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS 294
WTLPMFH NGW FTW A + TN+CLR+ ++ I GVTH+C AP+VLN + ++
Sbjct: 241 WTLPMFHCNGWCFTWTLAALCGTNICLRQVATKAIYQAIANDGVTHLCAAPVVLNSIVNA 300
Query: 295 PEAKQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWN 351
P+++ L R V ++TAG+ PP VL GF V+H YG +E G + CAWKP+W+
Sbjct: 301 PKSETILPLPRVVHVMTAGAAPPPSVLFAMSQQGFRVTHTYGLSETYGPSTVCAWKPEWD 360
Query: 352 KLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDP 411
+LP +A L ARQGV IGL +D+V V DG T GEIVMRG ++M GYLK+P
Sbjct: 361 ELPPETQARLNARQGVXYIGLEGLDVVSTTDMKPVPADGTTIGEIVMRGNTVMKGYLKNP 420
Query: 412 EATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNE 471
+A + +G +++GD+G+ HPDGY+++KDRSKD+IISGGENISS E+E+ +Y HP V E
Sbjct: 421 KANEETFANGWFHSGDLGVKHPDGYIQLKDRSKDIIISGGENISSVEVENAVYLHPAVLE 480
Query: 472 AAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDEL 531
A+VV RPD W E PCAFV+LK G D +DI+++CR+++P Y +PK+VVF L
Sbjct: 481 ASVVARPDDRWGESPCAFVTLKPGVDRSDERRLAEDIMKFCRSKLPAYWIPKSVVF-GPL 539
Query: 532 PKTATGKVQKYVL 544
PKTATGK+QK++L
Sbjct: 540 PKTATGKIQKHLL 552
>gi|389876703|ref|YP_006370268.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Tistrella
mobilis KA081020-065]
gi|388527487|gb|AFK52684.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Tistrella
mobilis KA081020-065]
Length = 545
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 256/552 (46%), Positives = 349/552 (63%), Gaps = 24/552 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PLTPL +ER A D ++I+ D +T+ + Y RC +LAS+L++ GI
Sbjct: 14 LDRNPANYQPLTPLSLLERTADVHPDRVAVIHGDQRWTYRELYARCRRLASALAARGIGY 73
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS++APN PAM E H+ VPM+GA+ N +N RLD ++ ILKH+E+K++F D S
Sbjct: 74 GDTVSIMAPNTPAMLEAHYGVPMTGAVLNELNIRLDPEALAFILKHAETKVLFTDREFSG 133
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQFS 181
++ + L LV+ DD P I DF+ YE +LA+GDP ++
Sbjct: 134 VIKATLELL----DDKPLVIDIDD----------PAITHGDFLGEIEYEALLAEGDPDYA 179
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + + L YT GTT PKGVV ++ ++ V++++ W +PK SV LWTLPMFH
Sbjct: 180 WEMPADEWQSISLGYTSGTTGDPKGVVYSHRGAWMNGVNNILTWDLPKGSVYLWTLPMFH 239
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQ 299
+GW F + T VCLR+ +A +F I HGVTH+CGAP VL LL ++P +
Sbjct: 240 CSGWCFPYTMVAAAGTQVCLRRVEAKAIFDAIETHGVTHLCGAPTVLGLLVNAPAEVKRN 299
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
D ++++TA S PP+ V+ E++GF ++H YG TE+ G V C WKP+W+ P ERA
Sbjct: 300 FDHKIQMMTAASAPPSSVIAGMEAMGFEITHVYGLTEVYGPVVVCEWKPEWDAKPLEERA 359
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+KARQGVR + + DPET V DGQT GE++MRG M GYLK+ AT K
Sbjct: 360 RIKARQGVRYALQQGLTVADPETLEPVPADGQTMGEVMMRGNITMKGYLKNKSATDKAFA 419
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+G+MHPDGY+E+KDRSKD+IISGGENISS E+E VLYSHP V EAAVV RPD
Sbjct: 420 GGWFHSGDLGVMHPDGYIELKDRSKDIIISGGENISSIEVEEVLYSHPAVMEAAVVARPD 479
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E PCAF++LK G+ TE +I ++C + R+ +PKT VF D LPKT+TGKV
Sbjct: 480 EKWGETPCAFITLKPGS-----TVTETEIREHCAKHLARFKLPKTFVFTD-LPKTSTGKV 533
Query: 540 QKYVLGDIANSM 551
QK+VL + A +
Sbjct: 534 QKFVLRERARGL 545
>gi|398861342|ref|ZP_10616975.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM79]
gi|398233450|gb|EJN19382.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM79]
Length = 550
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 257/550 (46%), Positives = 345/550 (62%), Gaps = 23/550 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L +PAN PLTPLGF++RAA D +II+ + TW+QT RC +LASSL GI
Sbjct: 10 LDQSPANHVPLTPLGFLDRAALVHPDRVAIIHGELQRTWAQTRARCYRLASSLIGRGIQL 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD---HL 120
G VS+++PN PAM E HF +P+SGA NTIN RLDA I+ IL+HSE KL+ VD
Sbjct: 70 GDTVSILSPNTPAMVEAHFGIPLSGATLNTINHRLDADGIAFILRHSECKLLLVDCEYMA 129
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
+S LE + L P L++I D + P YE +LA+GDPQF
Sbjct: 130 VASAALEQLEL------RPALIIIRDHLATVCVDADAP---------DYEALLAEGDPQF 174
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
V P ++ P+ LNYT GTT PKGVV ++ +++ + + +W +P+ LWTLPMF
Sbjct: 175 KGVWPTTEWLPIALNYTSGTTGDPKGVVVSHRGTYLMTLLQMTNWSLPQAPRYLWTLPMF 234
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGW FTW A T++CLRK A VF I +H H C AP V+ +++++P+ L
Sbjct: 235 HANGWCFTWAIAAAAGTHICLRKVSAENVFDAISRHKADHFCAAPTVMAMIANAPKPPVL 294
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
VR+LTAGSPPPA VL S+GF V H YG TE+AG +SC W+ W++L A E+A
Sbjct: 295 SHSVRVLTAGSPPPATVLDAVVSMGFQVDHVYGITEVAGTPISCVWQDGWDELSAPEKAG 354
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
++ RQG R + + D ET V DGQT GE+++RG ++M+GYLK+ AT K +
Sbjct: 355 MRVRQGSRAAAFEGLMVADSETLAPVPHDGQTTGELLLRGNTVMMGYLKNEAATQKAFEG 414
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGDV ++HP+GY++I DR KDVIISGGENISS EIE +L+ H V AAVV +PD
Sbjct: 415 GWFHTGDVAVVHPNGYMQITDRCKDVIISGGENISSVEIEDILHGHTSVLHAAVVAQPDD 474
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAF+ LK S TE ++I +C+AR+ RY P V+F+ ELPKTATGK+Q
Sbjct: 475 KWGEVPCAFIELK----SESQQPTEAELIAFCKARLARYKCPSRVIFM-ELPKTATGKIQ 529
Query: 541 KYVLGDIANS 550
K++L A S
Sbjct: 530 KFILRQQAGS 539
>gi|399545600|ref|YP_006558908.1| medium-chain-fatty-acid--CoA ligase [Marinobacter sp. BSs20148]
gi|399160932|gb|AFP31495.1| Medium-chain-fatty-acid--CoA ligase [Marinobacter sp. BSs20148]
Length = 542
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 262/551 (47%), Positives = 351/551 (63%), Gaps = 19/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P AN TP+ FI R A+ D P+II+ TW++T+ RCL+LAS+L GI
Sbjct: 9 LTPVDANYAVQTPIDFITRTASVYPDYPAIIHGAIRRTWAETHERCLRLASALVGRGIKK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM E HF VPM+GA+ N +N RLDA I+ +L+H+E+K++ VD
Sbjct: 69 GDTVAVMLPNIPAMVECHFGVPMTGAVMNALNVRLDAEVIAFMLEHAEAKVILVDREFGE 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++L+ VS K P L++ DD E + +D YE L +GDP++ W
Sbjct: 129 VILDAVSRL---DKKP-LIIDVDDPEYGEG------VKVSDL--DYEAFLQEGDPEYQWD 176
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++ ++ + W + V LWTLPMFH N
Sbjct: 177 MPTDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNTAVWSMAMHPVYLWTLPMFHCN 236
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W + T+VCLR+ D + LIR+H VTHMCGAPIVLN L + P A + +D
Sbjct: 237 GWCFPWTITAMAGTHVCLRRVDPEKILQLIREHRVTHMCGAPIVLNALLNVPPASKAGID 296
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ + AG+PPPA V+ E +G ++H YG TE+ G CAWK +WN LP ERA++
Sbjct: 297 HVVKAMVAGAPPPAQVIGAVEEMGIALTHTYGLTEVYGPVTVCAWKDRWNDLPLEERAAI 356
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L I DP T +DG+T GEI +RG ++M GYLK+P+AT + + G
Sbjct: 357 KSRQGVRYHTLGGTMIADPGTMKPTPKDGKTIGEIFLRGNTVMKGYLKNPKATEEAFRGG 416
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + H DGY+EIKDR KD+IISGGENIS+ EIE+VLY HP V EAAVV RPD
Sbjct: 417 WFHTGDLAVWHEDGYMEIKDRLKDIIISGGENISTIEIENVLYRHPAVMEAAVVARPDEK 476
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+LK D+G + TE +II +CR + R+ VPKTVVF D LPKT+TGKVQK
Sbjct: 477 WGETPCAFVTLK--PDAGNV--TEAEIIDFCRKHMARFKVPKTVVFSD-LPKTSTGKVQK 531
Query: 542 YVLGDIANSMS 552
++L D A +
Sbjct: 532 FLLRDQAKEIE 542
>gi|407788516|ref|ZP_11135644.1| acyl-CoA synthetase [Celeribacter baekdonensis B30]
gi|407197286|gb|EKE67355.1| acyl-CoA synthetase [Celeribacter baekdonensis B30]
Length = 553
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 258/556 (46%), Positives = 351/556 (63%), Gaps = 20/556 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN L+PL FIER A ++IYND TW +TY RC + AS+L+ GI
Sbjct: 12 LDMTAANFTQLSPLSFIERTAAIYPKKTAVIYNDLHRTWEETYLRCCKFASALTKRGIEK 71
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS+IA NIP M+E HF+VPM+GA+ N INTRLDA I+ IL H+E+K+V VD S
Sbjct: 72 GDTVSIIAANIPEMFEAHFSVPMTGAVLNAINTRLDAEAIAFILNHAEAKVVIVDPEFSE 131
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + + LV+ +D SS +I TY+ LA+GD W
Sbjct: 132 VMERALHM----AGGDILVIDIED----SSFEGGKKIGAL----TYDAFLAEGDENDDWS 179
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P S+ D + LNYT GTT PKGVV ++ ++ A+ ++ W +P+ LWTLPMFH N
Sbjct: 180 LPGSEWDAISLNYTSGTTGNPKGVVYHHRGAYLNALSNINTWDMPRHFTYLWTLPMFHCN 239
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W A T+VCLR TV+ LI+ VTH CGA IVL LL ++P+ + ++
Sbjct: 240 GWCFPWSVAAHAGTSVCLRAVRDSTVYELIKSQKVTHFCGAAIVLGLLGNAPDEMKAGIE 299
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V++LT G+PPPA V+ + ES GF V+HGYG TE G +V C+W +W+ LP ERA +
Sbjct: 300 HEVKVLTGGAPPPAIVIEKMESAGFDVTHGYGLTETYGASVFCSWHSEWDALPLSERARI 359
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGV+ + L ++ + +P+T + V DG+T GE+ +RG ++M GYLK+ AT + G
Sbjct: 360 KARQGVKNMALDDLMVAEPDTMVPVPSDGETVGEVFVRGNNVMKGYLKNISATDAAFRGG 419
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GD+ + HPDGY+EIKDRSKD+IISGGENISS E+E VLY HP V AAVV +PD
Sbjct: 420 WFASGDLAVRHPDGYIEIKDRSKDIIISGGENISSIEVEDVLYKHPSVMLAAVVAKPDEK 479
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF+ LK G TTE +II++CRA + R+ KTVVF LPKT+TGK+QK
Sbjct: 480 WGETPCAFIELKAGA-----TTTEAEIIEFCRANMARFKAVKTVVFA-TLPKTSTGKIQK 533
Query: 542 YVLGDIANSMSMSHSR 557
+VL D A +M+ + +
Sbjct: 534 FVLRDQARAMAQAEAE 549
>gi|83311600|ref|YP_421864.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Magnetospirillum magneticum AMB-1]
gi|82946441|dbj|BAE51305.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Magnetospirillum magneticum AMB-1]
Length = 734
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/551 (46%), Positives = 355/551 (64%), Gaps = 20/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PLTPLGF+ER+A+ D S+++ D +TW QTY RC +L S+L++ G+
Sbjct: 201 LDKNPANYVPLTPLGFLERSASVYPDRISVVHGDLRFTWKQTYDRCRRLGSALAARGVGV 260
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+A N PA YE F VPM+G + +N RLDA I+ +L+H E+K++ D +
Sbjct: 261 GDTVAVMAANTPAAYEAAFGVPMTGGVLCALNIRLDAEAIAFMLQHGEAKVLLTDREFAP 320
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ + +SL + +V+ DD +++ YE +A GDP+++WV
Sbjct: 321 TIKKALSLL----EAKPIVIDIDDAAVTTGEMLGEM--------EYEAFIAGGDPEYAWV 368
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ +I A+ ++++W + V LWTLPMFH N
Sbjct: 369 WPSDEWDAIALNYTSGTTGNPKGVVYHHRGAYINALGNVVNWGMTGHPVYLWTLPMFHCN 428
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W A + TNVCLR+ D +FA I KH VTHMCGAPIV+ +L ++PE + L
Sbjct: 429 GWCFPWTLAALAGTNVCLRRVDGGHMFAAIEKHKVTHMCGAPIVMGMLINAPEKDRRPLP 488
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV +TA +PPPA V+ R ES GF ++H YG TE+ G CAWK +W++LP ERA +
Sbjct: 489 HPVEFMTAAAPPPAAVIGRLESQGFKITHVYGLTEVYGPATVCAWKEEWDELPLDERAKM 548
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR + + + DP + + V +DG T GE+ RG +M GYLK+P AT++ G
Sbjct: 549 KSRQGVRYVNEEAMMVADPVSLVPVPKDGATMGEVFYRGNVVMKGYLKNPSATNEAFSGG 608
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G+ H DGY+E+KDRSKD+IISGGENIS+ E+E VLY HP V EAAVV RPD
Sbjct: 609 WFHTGDLGVWHADGYIELKDRSKDIIISGGENISTIEVEGVLYQHPSVGEAAVVARPDEK 668
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF+ LK G + T ++I+ +CR R+ Y P+TVVF + LPKT+TGKVQK
Sbjct: 669 WGETPCAFIGLKDGATA-----TAEEIMAFCRERLAHYKCPRTVVFTN-LPKTSTGKVQK 722
Query: 542 YVLGDIANSMS 552
YVL ++A ++
Sbjct: 723 YVLREMAKKLN 733
>gi|429333402|ref|ZP_19214099.1| acyl-CoA synthetase [Pseudomonas putida CSV86]
gi|428761981|gb|EKX84198.1| acyl-CoA synthetase [Pseudomonas putida CSV86]
Length = 540
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 252/550 (45%), Positives = 348/550 (63%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+P P N LTPL FIER A D P++I+ W +TY+RC +LAS+L+ GI
Sbjct: 8 LQPAPVNHVALTPLSFIERTAAVYGDYPAVIHGSIRRNWQETYQRCRRLASALAGRGIGQ 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM E HF VPM GA+ N +N RLDA I+ +L+H E+K++ D
Sbjct: 68 GDTVAVMLPNIPAMLEAHFGVPMIGAVLNALNVRLDAEAIAFMLEHGEAKVLITDREFHK 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + L + P LV+ DD E + + D YE LA+GDPQF+W
Sbjct: 128 VIGAALQLM----EHPPLVVDVDDPEYGEGCA----VSELD----YEAFLAEGDPQFAWQ 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + LNYT GTT PKGVV ++ ++ ++ + + W + V LWTLPMFH N
Sbjct: 176 WPEDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNQMTWAMGNHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + T+V LR+ D + LIR+H V+H+CGAPIVLN L + P++ + +D
Sbjct: 236 GWCYPWTVTALAGTHVFLRRVDPQKILTLIREHQVSHLCGAPIVLNALINMPDSAKAAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA V+ E +G V+H YG TE+ G CAW +W++ P +ERA +
Sbjct: 296 HPVNAMVAGAAPPAKVIGAVEEMGIKVTHVYGLTEVYGPVTVCAWHAEWDEKPLQERARI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L + + DP+T V RDG T GEI MRG ++M GYLK+PEAT++ + G
Sbjct: 356 KSRQGVRYATLEGLMVADPQTLEPVARDGNTLGEIFMRGNTVMKGYLKNPEATAEAFRGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + HPDGY+EIKDR KD+IISGGENIS+ E+E LY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVCHPDGYVEIKDRLKDIIISGGENISTIEVEDTLYRHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCA++SLK G + T E +II +CR + + +PKTV+F D LPKT+TGK+QK
Sbjct: 476 WGETPCAWISLKPGFED----TREAEIIAFCREHLAGFKLPKTVIFRD-LPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
Y+L D A ++
Sbjct: 531 YLLRDWAKAL 540
>gi|413957080|gb|AFW89729.1| putative AMP-dependent synthetase and ligase superfamily protein
[Zea mays]
Length = 577
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 261/556 (46%), Positives = 350/556 (62%), Gaps = 15/556 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD+L PAN PL+P+GF+ RA D S++Y +TW QTY RC +LAS+L S G
Sbjct: 1 MDQLPKRPANYVPLSPVGFLARANAVYADRASVVYGGVRFTWRQTYERCRRLASALLSLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH- 119
+ G VVSV+APN+PAMYE+HFAVPM+GA+ N INTRLDA ++ IL+HS +KL FVD+
Sbjct: 61 VRRGDVVSVLAPNVPAMYEMHFAVPMAGAVLNAINTRLDAAAVATILRHSGAKLFFVDYD 120
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ L T LV + DD + + + R+ + YE ++A GDP
Sbjct: 121 YVRLAGDALRLLAAAAGGTVPLVAVVDDIDSPTGA----RLGELE----YEALVAHGDPD 172
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
+ D + LNYT GTTSAPKGVV ++ ++ L+ W V V LWTLPM
Sbjct: 173 ADLPPLADEWDAVTLNYTSGTTSAPKGVVYSHRGAYLSTTSLLLQWGVATDPVYLWTLPM 232
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL---SSSPE 296
FH NGW+FTWG A G NVC+R ++ I +H VTHMC AP+V ++L +
Sbjct: 233 FHCNGWTFTWGMAARGGVNVCIRDARRADIYRAIARHRVTHMCCAPVVFSILLDGDGDGD 292
Query: 297 AKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
+QL+ PV +LT G+PPPA +L R E +GF V+H YG TE G ++C W+ +W++LP
Sbjct: 293 GRQLEAPVHVLTGGAPPPAALLERVERIGFKVTHAYGLTEATGPALACEWRDQWDRLPLP 352
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
ERA LKARQG+ + L + D+ + +T SV RDG++ GEIV+RG S+M GYL +PEA
Sbjct: 353 ERARLKARQGISVLSLADADVKNVDTMASVPRDGKSLGEIVLRGSSVMKGYLNNPEANDG 412
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
+ G + TGDVG++HPDGY+EIKDRSKDVIISGGENI S E+E VL+ HP V +AAVV
Sbjct: 413 AFRGGWFLTGDVGVVHPDGYIEIKDRSKDVIISGGENICSKEVEEVLFRHPAVADAAVVA 472
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
P P W E PCAFV + G G +E D++ +C R+ R+MVPK V I LP+ A
Sbjct: 473 MPHPRWGETPCAFVVPRDGKAHG---LSEDDVLAFCARRMARFMVPKKVEVIGALPRNAL 529
Query: 537 GKVQKYVLGDIANSMS 552
GKV+K L + A ++
Sbjct: 530 GKVEKVKLREAARKLA 545
>gi|357478905|ref|XP_003609738.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
gi|355510793|gb|AES91935.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
Length = 566
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 259/557 (46%), Positives = 356/557 (63%), Gaps = 11/557 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL F+ERAA SII+ YTW QTY+RC + AS+LS+
Sbjct: 7 IDDLPKNAANYTSLTPLWFLERAAQVHPTRKSIIHGSRHYTWRQTYQRCRRFASALSNRS 66
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G+ V+VIAPNIPA+YE HF +PM+GA+ N +N RL+A TI+ +L H + +V VD
Sbjct: 67 IALGNTVAVIAPNIPALYEAHFGIPMAGAVINPVNIRLNASTIAFLLGHCTASVVIVDQE 126
Query: 121 SSSLLLEVVSLFPPHSKT---PKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD 177
SL E + ++ +KT P L++I D+ S R + YE+ L GD
Sbjct: 127 FFSLAEEALKIWSDKTKTFKSPILIVIGDENCDPKSL----RYALSKGAVEYEDFLRSGD 182
Query: 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
P+++W P+ + + L YT GTT++PKGVV ++ +++++ + W + + +V LWTL
Sbjct: 183 PEYNWKPPEDEWQSIALGYTSGTTASPKGVVLHHRGAYLMSLSGALIWGMNEGAVYLWTL 242
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
PMFH NGW +TW A + TN+CLR+ A V+ I K+ VTH C AP+VLN + ++P
Sbjct: 243 PMFHCNGWCYTWTLAALFGTNICLRQVSAKAVYEAIVKYKVTHFCAAPVVLNSIINAPAE 302
Query: 298 KQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLP 354
+ L V + TAG+ PP VL GF V+H YG +E G +V CAWKP+W+ LP
Sbjct: 303 ETILPLPHVVHVNTAGAAPPPSVLSGMSERGFRVTHTYGLSETYGPSVYCAWKPEWDSLP 362
Query: 355 ARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEAT 414
RA L ARQGV+ I L +D+V+ +T V DG+T GEIVMRG ++M GYLK+P+A
Sbjct: 363 PESRARLHARQGVKYIALEGLDVVNTKTMQPVPADGKTVGEIVMRGNAVMKGYLKNPKAN 422
Query: 415 SKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474
+ +G Y++GD+ + HPDGY+EIKDRSKD+IISG ENISS E+E+ LYSHP + E +V
Sbjct: 423 EESFANGWYHSGDLAVKHPDGYIEIKDRSKDIIISGAENISSVEVENALYSHPAILETSV 482
Query: 475 VGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKT 534
V RPD W E PCAFV+LK G D +DI+++CRA++P Y VPK+VVF LPKT
Sbjct: 483 VARPDEKWGESPCAFVTLKPGVDRSNEQRLVEDILKFCRAKMPTYWVPKSVVF-GPLPKT 541
Query: 535 ATGKVQKYVLGDIANSM 551
ATGKVQK++L A M
Sbjct: 542 ATGKVQKHLLRAKAKEM 558
>gi|399911736|ref|ZP_10780050.1| acyl-CoA synthetase [Halomonas sp. KM-1]
Length = 543
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 252/542 (46%), Positives = 347/542 (64%), Gaps = 18/542 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN L+PL FIER+A+ D P++I+ D +W +T+ RC +LAS+L GI PG V+
Sbjct: 15 ANFVALSPLTFIERSASIYPDYPAVIHGDICRSWRETWSRCRRLASALEKRGIQPGETVA 74
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
V+ PN+PAM+E HF VP++G + NT+N RLDA I+ +L+H E++ V VD + ++ +
Sbjct: 75 VMLPNVPAMFEAHFGVPLAGCVLNTLNIRLDAEAIAYMLEHGEAQAVLVDPEFAGVIEDA 134
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
VS LV+ DD + + YE +LA+GDP++++ P+ +
Sbjct: 135 VSRL----AIKPLVIDVDDALYEGETRHIGEL-------EYEALLAEGDPEYAYQLPEDE 183
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
+ LNYT GTT PKGVV ++ ++ AV ++++W +P V LWTLPMFH NGW F
Sbjct: 184 WQAISLNYTSGTTGKPKGVVYHHRGAYLNAVSNILEWAMPHHPVYLWTLPMFHCNGWCFP 243
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRI 306
W A T+VCLR+ D + LI VTH GAPIVLN L + P + ++ D PV++
Sbjct: 244 WTIAANAGTSVCLRRVDPKKIMDLIADEQVTHFSGAPIVLNGLVNLPAEQKREFDHPVKV 303
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
TAG+ PPA V+ E LG V+H YG TE+ G CAW+ W++LP ERA +KARQG
Sbjct: 304 TTAGAAPPASVIAGVEKLGIEVTHVYGLTEVYGPVTVCAWREAWDELPLEERARIKARQG 363
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
VR L + + DP T V +DG+T GEI+MRG ++M GYLK+ AT + ++ G Y+TG
Sbjct: 364 VRYHMLEALCVADPNTLEPVPKDGETIGEILMRGNNVMKGYLKNEAATEQALEGGWYHTG 423
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+ + H DGY+EIKDRSKD+IISGGENIS+ E+E +YSHP V EAAVV +PD W E P
Sbjct: 424 DLAVWHADGYIEIKDRSKDIIISGGENISTIEVEDAIYSHPAVEEAAVVAKPDEKWGETP 483
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546
CAFV LK G TE DII++CR + R+ VPKTV+F ELPKT+TGK+QK+VL +
Sbjct: 484 CAFVKLKVGYGE----VTEADIIEHCRQHLARFKVPKTVIFT-ELPKTSTGKIQKFVLRE 538
Query: 547 IA 548
A
Sbjct: 539 EA 540
>gi|260432681|ref|ZP_05786652.1| acyl-CoA synthetase [Silicibacter lacuscaerulensis ITI-1157]
gi|260416509|gb|EEX09768.1| acyl-CoA synthetase [Silicibacter lacuscaerulensis ITI-1157]
Length = 542
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 263/552 (47%), Positives = 351/552 (63%), Gaps = 23/552 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN L+PL +IER A D P+++Y D Y+W+QTY RC +LAS+L++ G+
Sbjct: 11 LDKCPANFTALSPLSYIERTAAVYPDYPAVVYGDRRYSWAQTYARCRRLASALAARGVGT 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS+IA NIP MYE HF VPM+GA+ N INTRLDA I+ IL H+ESK++ VD
Sbjct: 71 GDTVSIIAANIPEMYEAHFGVPMAGAVLNAINTRLDAPIIAFILNHAESKVLLVD----- 125
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD--TYENMLAKGDPQFS 181
P S K L D +I P + + TY+++LA+GDP+F
Sbjct: 126 ---------PEFSGVVKQALEQVDHDILVIDIEDPSFDGGEKLGALTYDDLLAEGDPEFD 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + D + LNYT GTT PKGVV ++ + A +++ W +P+ SV LWTLPMFH
Sbjct: 177 WSLPADEWDAITLNYTSGTTGNPKGVVYHHRGAALNATSNILTWGMPQHSVYLWTLPMFH 236
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA-KQL 300
NGW F W A T+VCLR ++ R VTH CGAPIVLN+L+++P+ K
Sbjct: 237 CNGWCFPWTMAANAGTSVCLRAVRDAPIYRAFRDEKVTHFCGAPIVLNMLANAPDHLKDF 296
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
++++TAG+PPPA V+ E +G V+H YG TE G +V CAWK +WN PA ERA+
Sbjct: 297 GHEIKVMTAGAPPPAAVIAAMEGMGIEVTHVYGLTETYGPSVVCAWKDEWNDKPAEERAA 356
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
LK RQGV+ + L+ + + DPET V DG+T GEI M+G +M GYLK+PEAT K +
Sbjct: 357 LKVRQGVKYVALSGLMVADPETLEPVPADGETMGEIFMQGNIVMKGYLKNPEATRKAFRG 416
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G + +GD+G+MHPDGY+ +KDRSKD+IISGGENISS E+E +LY HP V EAAVV +PD
Sbjct: 417 GWFASGDLGVMHPDGYIALKDRSKDIIISGGENISSVEVEDILYKHPAVMEAAVVAKPDE 476
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E PCAFV LK G ++ TE D+I +CR + + PKTVVF LPKT+TGK+Q
Sbjct: 477 KWGETPCAFVELKPGAEA-----TEADLIAFCRDHMAHFKAPKTVVF-GPLPKTSTGKIQ 530
Query: 541 KYVLGDIANSMS 552
K+ L + A ++
Sbjct: 531 KFKLREQARALG 542
>gi|325277762|ref|ZP_08143323.1| acyl-CoA synthetase [Pseudomonas sp. TJI-51]
gi|324097100|gb|EGB95385.1| acyl-CoA synthetase [Pseudomonas sp. TJI-51]
Length = 540
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/550 (46%), Positives = 347/550 (63%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+P N LTPL FIER A D P++I+ W +TY+RC +LAS+L GI
Sbjct: 8 LQPAAVNHVALTPLSFIERTAAVYGDYPAVIHGAIRRNWQETYQRCRRLASALVGRGIGR 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM E HF VPM+GA+ NT+N RLDA I+ +L+H E+K++ D +
Sbjct: 68 GDTVAVMLPNIPAMLEAHFGVPMTGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDREFHT 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ ++L + P LV+ DD E + + D YE +LA+GDP F+W
Sbjct: 128 VIAAALALL----EHPPLVVDVDDPEYGEGRA----VSTLD----YEALLAEGDPAFAWD 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ ++ A+ + + W + + V LWTLPMFH N
Sbjct: 176 WPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNAIGNQMTWAMGHRPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + T+V LR+ D V LIR+H V+H+CGAPIVLN L + PEA + ++
Sbjct: 236 GWCYPWTITALAGTHVFLRRVDPQKVLNLIREHRVSHLCGAPIVLNALVNMPEAAKAAIE 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV+ + AG+ PPA V+ E +G V+H YG TE+ G CAW +W+ L ERA +
Sbjct: 296 HPVQAMVAGAAPPAKVIGAVEQMGIKVTHTYGLTEVYGPVTVCAWHEEWDALTLEERAQI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L + + DP++ V RDG T GEI MRG ++M GYLK+PEAT++ + G
Sbjct: 356 KARQGVRYPTLDGLMVADPQSLEPVPRDGNTLGEIFMRGNTVMKGYLKNPEATAEAFRGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + H DGY+EIKDR KD+IISGGENIS+ E+E LY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVWHADGYVEIKDRLKDIIISGGENISTIEVEDALYKHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+LK G + T E DI +CR + + VPKTVVF ELPKT+TGK+QK
Sbjct: 476 WGETPCAFVALKPGRED----TREADISSWCREHLAGFKVPKTVVF-GELPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
Y+L D A ++
Sbjct: 531 YLLRDRARTL 540
>gi|351729965|ref|ZP_08947656.1| AMP-dependent synthetase and ligase [Acidovorax radicis N35]
Length = 566
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 252/549 (45%), Positives = 354/549 (64%), Gaps = 18/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ PAN PLTPLGF++R+A + ++++ T TW+QT R +LAS+L+ G+
Sbjct: 18 LERTPANHLPLTPLGFLDRSALVHPEGIAVVHAGTKQTWAQTRDRAYRLASALAQRGVRR 77
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+++APN PAM E H +P+ GA+ N IN RLDA I+ IL+H E+ ++ VD ++
Sbjct: 78 GDTVAILAPNTPAMLEAHLGIPLCGAVINAINCRLDAEGIAFILQHGEAHILLVDSEFAA 137
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L + V+ P LV+ D + + PA YE +LA+GDP F +
Sbjct: 138 LADKAVAGL----DQPPLVVAVHDAGLLAQ--------PAFGAMDYEALLAEGDPAFEGL 185
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + DP+ LNYT GTT PKGVV ++ +++++ + DW +P++ V LWTLPMFH N
Sbjct: 186 WPEDEWDPIALNYTSGTTGDPKGVVPSHRGAYLMSLLQMTDWAMPRRPVYLWTLPMFHAN 245
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW FTW T+VCLRK A +F I +HGV H C AP VL +L+++PE ++ L
Sbjct: 246 GWCFTWAITAAAGTHVCLRKVTAKAIFEAIAEHGVDHFCAAPTVLAMLANAPEHERIALP 305
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
RPVR+LTAGSPPPA +L ++GF V H YG TE++G VSC +P W LP RA L
Sbjct: 306 RPVRVLTAGSPPPAAILQAIAAMGFDVDHVYGITEVSGTPVSCVRQPGWAALPEAGRAQL 365
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
+ARQGV L + +++P+T V DG T GEI++RG ++M GYLK+P AT+K G
Sbjct: 366 QARQGVHAAALEHMRVLNPDTLEPVPADGVTAGEIMLRGNTVMKGYLKNPGATAKAFAGG 425
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ ++HPDGY++I DRSKDVIISGGENISS E+E VL+ HP V AAVV +PD
Sbjct: 426 WFHTGDIAVLHPDGYVQITDRSKDVIISGGENISSVEVEDVLHRHPAVLLAAVVAQPDER 485
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK D+ G ++ + ++I CR + R+ P+ +VF + LPKTATGK+QK
Sbjct: 486 WGEVPCAFVELK--PDAVGTVSAD-ELIALCREDLARFKCPRQIVF-EVLPKTATGKIQK 541
Query: 542 YVLGDIANS 550
+ L +IA S
Sbjct: 542 FRLREIAGS 550
>gi|358448387|ref|ZP_09158891.1| acyl-CoA synthetase [Marinobacter manganoxydans MnI7-9]
gi|357227484|gb|EHJ05945.1| acyl-CoA synthetase [Marinobacter manganoxydans MnI7-9]
Length = 542
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 261/551 (47%), Positives = 344/551 (62%), Gaps = 19/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P AN +P+ FIER AT + P++I+ Y W+QTY RC +LAS+L GI
Sbjct: 9 LAPVDANYAVQSPVDFIERTATVYPEYPAVIHGAIRYNWAQTYERCRRLASALKGRGIGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM E HF VPM GA+ NT+N RLDA I+ +L H E+K+V D
Sbjct: 69 GDTVAVMLPNIPAMVEAHFGVPMIGAVLNTLNVRLDAEAIAFMLDHGEAKVVIADREFGE 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + VS T LV+ DD E + +D YE L +GDP F W
Sbjct: 129 VIRDAVSRL----DTKPLVIDVDDPEYGEG------VQVSDL--DYEAFLQEGDPAFQWS 176
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+++ D + LNYT GTT PKGVV ++ +I A+ + W + V LWTLPMFH N
Sbjct: 177 FPENEWDAISLNYTSGTTGNPKGVVYHHRGAYINAIGNQTVWSMDMHPVYLWTLPMFHCN 236
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W + T+VCLR+ D + LIR H VTHMCGAPIVLN L + PE+ + +D
Sbjct: 237 GWCFPWTITAMAGTHVCLRRVDPEKILQLIRDHQVTHMCGAPIVLNALLNVPESAKAGID 296
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ +TAG+ PPA V+ E +G V+H YG TE+ G CAWK +W+ LP +RA
Sbjct: 297 HDVKSMTAGAAPPAQVIGAIEEMGIQVTHVYGLTEVYGPVTVCAWKSEWDALPLHDRARK 356
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L + DP T V +DG+T GEI +RG ++M GYLK+P+AT + + G
Sbjct: 357 KARQGVRYHTLAGTMVGDPNTMEPVPKDGKTIGEIFLRGNTVMKGYLKNPKATEEAFRGG 416
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + H DGY+EIKDR KD+IISGGENIS+ E+E LY HP V EAAVV RPD
Sbjct: 417 WFHTGDLAVWHEDGYMEIKDRLKDIIISGGENISTIEVEDTLYRHPAVLEAAVVARPDEK 476
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+LK ++G +E+DII +CR + R+ VPKT+VF ELPKT+TGK+QK
Sbjct: 477 WGETPCAFVTLK--PEAG--QVSEEDIINFCREHLARFKVPKTIVF-SELPKTSTGKIQK 531
Query: 542 YVLGDIANSMS 552
+VL D A +
Sbjct: 532 FVLRDQAKELD 542
>gi|385330780|ref|YP_005884731.1| acyl-CoA synthetase [Marinobacter adhaerens HP15]
gi|311693930|gb|ADP96803.1| acyl-CoA synthetase [Marinobacter adhaerens HP15]
Length = 542
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 261/551 (47%), Positives = 345/551 (62%), Gaps = 19/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P AN +P+ FIER AT + P++I+ Y W+QTY RC +LAS+L GI
Sbjct: 9 LAPVDANYAVQSPVDFIERTATVYPEYPAVIHGAIRYNWAQTYERCRRLASALKGRGIGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM E HF VPM GA+ NT+N RLDA I+ +L H E+K+V D
Sbjct: 69 GDTVAVMLPNIPAMVEAHFGVPMIGAVLNTLNVRLDAEAIAFMLDHGEAKVVIADREFGE 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + VS T LV+ DD E + +D YE L +GDP F W
Sbjct: 129 VIRDAVSRL----DTKPLVIDVDDPEYGEG------VQVSDL--DYEAFLQEGDPTFQWS 176
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+++ D + LNYT GTT PKGVV ++ +I A+ + W + V LWTLPMFH N
Sbjct: 177 FPENEWDAISLNYTSGTTGNPKGVVYHHRGAYINAIGNQTVWSMDMHPVYLWTLPMFHCN 236
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W + T+VCLR+ D + LIR H VTHMCGAPIVLN L + PE+ + +D
Sbjct: 237 GWCFPWTITAMAGTHVCLRRVDPEKILQLIRDHQVTHMCGAPIVLNALLNVPESAKAGID 296
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ +TAG+ PPA V+ E +G V+H YG TE+ G CAWK +W+ LP +RA
Sbjct: 297 HDVKSMTAGAAPPAQVIGAIEEMGIQVTHVYGLTEVYGPVTVCAWKSEWDALPLHDRARK 356
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L + DP T V +DG+T GEI +RG ++M GYLK+P+AT + + G
Sbjct: 357 KARQGVRYHTLAGTMVGDPNTMEPVPKDGKTIGEIFLRGNTVMKGYLKNPKATEEAFRGG 416
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + H DGY+EIKDR KD+IISGGENIS+ E+E LY HP V EAAVV RPD
Sbjct: 417 WFHTGDLAVWHEDGYMEIKDRLKDIIISGGENISTIEVEDTLYRHPAVLEAAVVARPDEK 476
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+LK ++G + +E+DII +CR + R+ VPKT+VF ELPKT+TGK+QK
Sbjct: 477 WGETPCAFVTLK--PEAGDV--SEEDIINFCREHLARFKVPKTIVF-SELPKTSTGKIQK 531
Query: 542 YVLGDIANSMS 552
+VL D A +
Sbjct: 532 FVLRDQAKELD 542
>gi|195616080|gb|ACG29870.1| AMP-binding protein [Zea mays]
Length = 567
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/566 (45%), Positives = 360/566 (63%), Gaps = 13/566 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL F+ERAA S+++ YTW+ TY RC +LAS+L+
Sbjct: 7 IDDLPRNDANYTALTPLWFLERAALTHPARASVVHGPVRYTWADTYSRCRRLASALARRS 66
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ G V+VIAPNIPA+YE HF VPM+GA+ N +N RL+A T++ +L+HS +++V VD
Sbjct: 67 VGHGSTVAVIAPNIPAIYEAHFGVPMAGAVVNCVNIRLNAATVAFLLEHSSAEVVMVDQE 126
Query: 121 SSSLLLEVVSLFPPHSK----TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG 176
+L + + + K P L++I D ++ R D YE L G
Sbjct: 127 FFTLAEDSLRIIADKKKGTFKQPLLIVIGDATCDPTALQDALRKGAID----YEAFLESG 182
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
DP+F+W P+ + + L YT GTTS PKGVV ++ +++++ + W + + +V LWT
Sbjct: 183 DPEFAWRPPQDEWKSIALGYTSGTTSNPKGVVLHHRGAYLMSLSGALIWGMNEGAVYLWT 242
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
LPMFH NGW +TW A + T++CLR+ A +F+ I GVTH CGAP+VLN + ++P
Sbjct: 243 LPMFHCNGWCYTWTLAALCGTSICLRQVSAKAIFSAIANEGVTHFCGAPVVLNTIINAPP 302
Query: 297 AKQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKL 353
A L R V ++TAG+ PP VL LGF ++H YG +E G + CAWKP+W++L
Sbjct: 303 ADTILPLPRVVNVMTAGAAPPPSVLAAMSKLGFRITHTYGLSETYGPSTVCAWKPEWDRL 362
Query: 354 PARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
PA ERA L ARQGVR +GL +D+VDP+T V DG T GEIVMRG +M GYLK+PEA
Sbjct: 363 PADERARLHARQGVRYVGLEGLDVVDPKTMAPVPADGTTMGEIVMRGNGVMKGYLKNPEA 422
Query: 414 TSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
++ ++G +++GD+G+ H DGY+E++DR+KD+IISGGENISS E+E +Y HP V EA+
Sbjct: 423 NAEAFENGWFHSGDLGVRHGDGYVEVRDRAKDIIISGGENISSLEVEKAVYLHPAVLEAS 482
Query: 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPK 533
VV R D W E PCAFV+LK D +DI+++CR ++P Y VPK+VVF LPK
Sbjct: 483 VVARADERWGESPCAFVTLKDAVDRSDEAALARDIMRFCREKLPGYWVPKSVVF-GPLPK 541
Query: 534 TATGKVQKYVLGDIANSMS-MSHSRM 558
TATGK++K+ L A + + SRM
Sbjct: 542 TATGKIKKHELRAKAKELGPVGKSRM 567
>gi|212275534|ref|NP_001130745.1| putative AMP-dependent synthetase and ligase superfamily protein
[Zea mays]
gi|194690002|gb|ACF79085.1| unknown [Zea mays]
gi|195613958|gb|ACG28809.1| AMP-binding protein [Zea mays]
gi|414866443|tpg|DAA45000.1| TPA: putative AMP-dependent synthetase and ligase superfamily
protein [Zea mays]
Length = 567
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/566 (45%), Positives = 360/566 (63%), Gaps = 13/566 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL F+ERAA S+++ YTW+ TY RC +LAS+L+
Sbjct: 7 IDDLPRNDANYTALTPLWFLERAALTHPARASVVHGPVRYTWADTYSRCRRLASALARRS 66
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ G V+VIAPNIPA+YE HF VPM+GA+ N +N RL+A T++ +L+HS +++V VD
Sbjct: 67 VGHGSTVAVIAPNIPAIYEAHFGVPMAGAVVNCVNIRLNAATVAFLLEHSSAEVVMVDQE 126
Query: 121 SSSLLLEVVSLFPPHSK----TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG 176
+L + + + K P L++I D ++ R D YE L G
Sbjct: 127 FFTLAEDSLRIIADKKKGTFEQPLLIVIGDATCDPTTLQDALRKGAID----YEAFLESG 182
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
DP+F+W P+ + + L YT GTTS PKGVV ++ +++++ + W + + +V LWT
Sbjct: 183 DPEFAWRPPQDEWKSIALGYTSGTTSNPKGVVLHHRGAYLMSLSGALIWGMNEGAVYLWT 242
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
LPMFH NGW +TW A + T++CLR+ A +F+ I GVTH CGAP+VLN + ++P
Sbjct: 243 LPMFHCNGWCYTWTLAALCGTSICLRQVSAKAIFSAIANEGVTHFCGAPVVLNTIINAPP 302
Query: 297 AKQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKL 353
A L R V ++TAG+ PP VL LGF ++H YG +E G + CAWKP+W++L
Sbjct: 303 ADTILPLPRVVNVMTAGAAPPPSVLAAMSKLGFRITHTYGLSETYGPSTVCAWKPEWDRL 362
Query: 354 PARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
PA ERA L ARQGVR +GL +D+VDP+T V DG T GEIVMRG +M GYLK+PEA
Sbjct: 363 PADERARLHARQGVRYVGLEGLDVVDPKTMTPVPADGTTMGEIVMRGNGVMKGYLKNPEA 422
Query: 414 TSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
++ ++G +++GD+G+ H DGY+E++DR+KD+IISGGENISS E+E +Y HP V EA+
Sbjct: 423 NAEAFENGWFHSGDLGVRHGDGYVEVRDRAKDIIISGGENISSLEVEKAVYLHPAVLEAS 482
Query: 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPK 533
VV R D W E PCAFV+LK D +DI+++CR ++P Y VPK+VVF LPK
Sbjct: 483 VVARADERWGESPCAFVTLKDAVDRSDEAALARDIMRFCREKLPGYWVPKSVVF-GPLPK 541
Query: 534 TATGKVQKYVLGDIANSMS-MSHSRM 558
TATGK++K+ L A + + SRM
Sbjct: 542 TATGKIKKHELRAKAKELGPVGKSRM 567
>gi|7670021|dbj|BAA94975.1| AMP-binding protein [Arabidopsis thaliana]
Length = 571
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/560 (45%), Positives = 355/560 (63%), Gaps = 14/560 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L PAN LTPL F++RAA S+I+ YTW QTY RC +LAS+L+
Sbjct: 9 IDDLPKIPANYTALTPLWFLDRAAVVHPTRKSVIHGSREYTWRQTYDRCRRLASALADRS 68
Query: 61 INPGHVV--SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD 118
I PG V ++IAPNIPAMYE HF VPM GA+ N +N RL+A T++ +L HS+S ++ VD
Sbjct: 69 IGPGSTVFVAIIAPNIPAMYEAHFGVPMCGAVLNCVNIRLNAPTVAFLLSHSQSSVIMVD 128
Query: 119 HLSSSLLLEVVSLFPPHS----KTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLA 174
+L + + L + K P L++I D S + R ++ YE+ LA
Sbjct: 129 QEFFTLAEDSLRLMEEKAGSSFKRPLLIVIGDHTCAPESLN---RALSKGAIE-YEDFLA 184
Query: 175 KGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLL 234
GDP + W P + + L YT GTT++PKGVV ++ +I+A+ + + W + +V L
Sbjct: 185 TGDPNYPWQPPADEWQSIALGYTSGTTASPKGVVLHHRGAYIMALSNPLIWGMQDGAVYL 244
Query: 235 WTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS 294
WTLPMFH NGW F W AV+ T++CLR+ A V+++I K+ VTH C AP+VLN + ++
Sbjct: 245 WTLPMFHCNGWCFPWSLAVLSGTSICLRQVTAKEVYSMIAKYKVTHFCAAPVVLNAIVNA 304
Query: 295 PEAKQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWN 351
P+ L V ++TAG+ PP VL GF V+H YG +E G + CAWKP+W+
Sbjct: 305 PKEDTILPLPHTVHVMTAGAAPPPSVLFSMNQKGFRVAHTYGLSETYGPSTVCAWKPEWD 364
Query: 352 KLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDP 411
LP +A L ARQGVR G+ ++D++D +TG V DG+T GEIV RG +M GYLK+P
Sbjct: 365 SLPPETQAKLNARQGVRYTGMEQLDVIDTQTGKPVPADGKTAGEIVFRGNMVMKGYLKNP 424
Query: 412 EATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNE 471
EA + G +++GD+ + HPD Y+EIKDRSKDVIISGGENISS E+E+V+Y HP V E
Sbjct: 425 EANKETFAGGWFHSGDIAVKHPDNYIEIKDRSKDVIISGGENISSVEVENVVYHHPAVLE 484
Query: 472 AAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDEL 531
A+VV RPD WQE PCAFV+LK+ + +DI+++CR ++P Y VPK+VVF L
Sbjct: 485 ASVVARPDERWQESPCAFVTLKSDYEKHDQNKLAQDIMKFCREKLPAYWVPKSVVF-GPL 543
Query: 532 PKTATGKVQKYVLGDIANSM 551
PKTATGK+QK++L A M
Sbjct: 544 PKTATGKIQKHILRTKAKEM 563
>gi|356521803|ref|XP_003529540.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
Length = 568
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/556 (46%), Positives = 351/556 (63%), Gaps = 9/556 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL F+ERAAT S+I+ YTW QTY RC + AS+LS+
Sbjct: 9 IDDLPKNAANYTALTPLWFLERAATVHPTRNSLIHGSRRYTWQQTYHRCRRFASALSNHS 68
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G+ V+VIAPNIPA+YE HF +PMSGA+ N +N RL+A T++ +L H + V VD
Sbjct: 69 IGLGNTVAVIAPNIPALYEAHFGIPMSGAVLNPVNIRLNASTVAFLLGHCTAAAVIVDQE 128
Query: 121 SSSLLLEVVSLFPPHSKT--PKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP 178
SL E + ++ +KT P L+++ D+ + + YE+ L GDP
Sbjct: 129 FFSLAEEALKIWSEKAKTFSPPLLIVISDENCDPKAL---KYALGKGAIEYEDFLQSGDP 185
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
+++W P+ + + L YT GTT++PKGVV ++ +++++ + W + + +V LWTLP
Sbjct: 186 EYAWKPPEDEWQSIALGYTSGTTASPKGVVLHHRGAYLMSLSGALIWGMTEGAVYLWTLP 245
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK 298
MFH NGW +TW A + TN+CLR+ A V+ I K+ VTH C AP+VLN L ++P
Sbjct: 246 MFHCNGWCYTWTLAALCGTNICLRQVTAKAVYGAIAKYKVTHFCAAPVVLNTLINAPAED 305
Query: 299 Q---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
L V + TAG+ PP VL GF V+H YG +E G +V CAWKP+W LP
Sbjct: 306 TILPLPHVVHVNTAGAAPPPSVLSGMSERGFRVTHTYGLSETYGPSVYCAWKPEWESLPP 365
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
+A L ARQGVR IGL + +V+ +T V DG+T GEIVMRG S+M GYLK+P+A
Sbjct: 366 ENQARLNARQGVRYIGLEGLAVVNTKTMEPVPADGKTVGEIVMRGNSVMKGYLKNPKANE 425
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
+ +G +++GD+ + HPDGY+EIKDRSKD+IISG ENISS EIE+ LYSHP + EAAVV
Sbjct: 426 ETFANGWFHSGDLAVKHPDGYIEIKDRSKDIIISGAENISSVEIENTLYSHPSILEAAVV 485
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
R D W E PCAFV+LK G D +DI+++ RA++P Y VPK+VVF LPKTA
Sbjct: 486 ARADEKWGESPCAFVTLKPGVDKSNEQRIIEDILKFSRAKMPAYWVPKSVVF-GALPKTA 544
Query: 536 TGKVQKYVLGDIANSM 551
TGK+QK++L A M
Sbjct: 545 TGKIQKHILRAKAKEM 560
>gi|443468437|ref|ZP_21058654.1| Long-chain-fatty-acid--CoA ligase [Pseudomonas pseudoalcaligenes
KF707]
gi|442897582|gb|ELS24483.1| Long-chain-fatty-acid--CoA ligase [Pseudomonas pseudoalcaligenes
KF707]
Length = 540
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/550 (46%), Positives = 345/550 (62%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N L+PL FIER A P++I+ W++TY RC +LAS+L+ GI
Sbjct: 8 LAPAAVNHIALSPLSFIERTAAVYPHYPAVIHGSIRRNWAETYSRCRRLASALAGRGIGQ 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM E HF VPM GA+ NT+N RLDA I+ +L+H E+K++ D
Sbjct: 68 GDTVAVMLPNIPAMLEAHFGVPMIGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDREFHD 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + P LV+ DD E + + D YE +LA+GDP+F+W
Sbjct: 128 VIHAAIGML----DQPPLVIDVDDPEYGEGQA----VSDLD----YEALLAEGDPEFAWQ 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + LNYT GTT PKGVV ++ ++ A+ + + W + Q V LWTLPMFH N
Sbjct: 176 WPRDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWNMGNQPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + +V LR+ D + LIR H V+H+CGAPIVLN L + P++ + +D
Sbjct: 236 GWCYPWTVTALAGVHVFLRRVDPQKILNLIRDHQVSHLCGAPIVLNALVNMPDSAKAAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA V+ E +G V+H YG TE+ G CAW +W++LP ERA +
Sbjct: 296 HPVNAMVAGAAPPAKVIGAVEEMGIRVTHVYGLTEVYGPVTVCAWHEEWDELPLEERARI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L V + DP+T V RDGQT GEI MRG ++M GYLK+P ATS+ + G
Sbjct: 356 KSRQGVRYPTLEGVMVADPKTLEPVPRDGQTIGEIFMRGNTVMKGYLKNPSATSEAFEGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + HPDGY+EI+DR KD+IISGGENIS+ E+E VLY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVWHPDGYVEIRDRLKDIIISGGENISTIELEGVLYRHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+LK T E DII +CR + + VPKTVVF +LPKT+TGK+QK
Sbjct: 476 WGETPCAFVTLKADHAD----TREADIIGFCREHLASFKVPKTVVFT-QLPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL D+A ++
Sbjct: 531 YVLRDMAKNL 540
>gi|356564634|ref|XP_003550556.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
Length = 569
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/556 (45%), Positives = 352/556 (63%), Gaps = 9/556 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL F+ERAAT S+I+ YTW QTY RC + AS+LS+
Sbjct: 10 IDHLPKNAANYTALTPLWFLERAATVHPTRNSLIHGSRHYTWQQTYHRCRRFASALSNHS 69
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G+ V+VIAPNIPA+YE HF +PM+GA+ N +N RL+A TI+ +L H + V VD
Sbjct: 70 IGLGNTVAVIAPNIPAVYEAHFGIPMAGAVLNPLNIRLNASTIAFLLGHCTAAAVIVDQE 129
Query: 121 SSSLLLEVVSLFPPHSKT--PKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP 178
SL E + ++ +KT P L+++ D+ + + YE+ L GDP
Sbjct: 130 FFSLAEEALKIWSEKAKTFSPPLLIVIGDENCDPKAL---KYALGKGAVDYEDFLQSGDP 186
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
+++W P+ + + L YT GTT++PKGVV ++ +++++ + W + + +V LWTLP
Sbjct: 187 EYAWKPPEDEWQSISLGYTSGTTASPKGVVLHHRGAYLMSLSGALIWGMTEGAVYLWTLP 246
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK 298
MFH NGW +TW A + TN+CLR+ V+ I K+ V+H C AP+VLN + ++P
Sbjct: 247 MFHCNGWCYTWTLAALCGTNICLRQVTPKAVYEAIAKYKVSHFCAAPVVLNTIVNAPAED 306
Query: 299 Q---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
L V + TAG+ PP VL GF V+H YG +E G +V CAWKP+W LP
Sbjct: 307 TILPLPHVVHVNTAGAAPPPSVLSGMSERGFRVTHTYGLSETYGPSVYCAWKPEWESLPP 366
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
RA L ARQGVR +GL +D+V+ +T V DG+T GEIVMRG S+M GYLK+P+A
Sbjct: 367 ENRARLNARQGVRYVGLEGLDVVNTKTMEPVPADGKTVGEIVMRGNSVMKGYLKNPKANE 426
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
+ +G +++GD+ + HPDGY+EIKDRSKD+IISG ENISS EIE+ LYSHP + EAAVV
Sbjct: 427 ETFANGWFHSGDLAVKHPDGYIEIKDRSKDIIISGAENISSVEIENTLYSHPAILEAAVV 486
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
R D W E PCAFV+LK G D +DI+++C+A++P Y VPK+VVF LPKTA
Sbjct: 487 ARADEKWGESPCAFVTLKPGVDKSNGQRIIEDILKFCKAKMPAYWVPKSVVF-GALPKTA 545
Query: 536 TGKVQKYVLGDIANSM 551
TGK+QK++L A M
Sbjct: 546 TGKIQKHILRAKAKEM 561
>gi|431802966|ref|YP_007229869.1| acyl-CoA synthetase [Pseudomonas putida HB3267]
gi|430793731|gb|AGA73926.1| acyl-CoA synthetase [Pseudomonas putida HB3267]
Length = 540
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 256/550 (46%), Positives = 346/550 (62%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N LTPL FIER A D P++I+ W QTY+RC +LAS+L GI
Sbjct: 8 LMPAAVNHVALTPLSFIERTAAVYGDYPAVIHGAIRRNWQQTYQRCRRLASALVGRGIGR 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM E HF VPM+GA+ NT+N RLDA I+ +L+H E+K++ D +
Sbjct: 68 GDTVAVMLPNIPAMLEAHFGVPMTGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDREFHT 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ ++L + P LV+ DD E + + D YE LA+GDP F+W
Sbjct: 128 VIEAALALL----EHPPLVVDVDDPEYGEGRA----VSELD----YEAFLAEGDPDFAWE 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ ++ A+ + + W + + V LWTLPMFH N
Sbjct: 176 WPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMVWGMGHRPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + T+V LR+ D + LIR+H V+H+CGAPIVLN L + PEA + ++
Sbjct: 236 GWCYPWTITALAGTHVFLRRVDPQKILTLIREHRVSHLCGAPIVLNALVNMPEAAKAAIE 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV+ + AG+ PPA V+ E +G V+H YG TE+ G CAW +W++L ERA +
Sbjct: 296 HPVQAMVAGAAPPAKVIGAVEEMGIQVTHTYGLTEVYGPVTVCAWHDEWDELSLEERARI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L + + DP+T V RDG T GEI MRG ++M GYLK+PEAT++ + G
Sbjct: 356 KSRQGVRYPTLDGLMVADPQTLEPVPRDGNTLGEIFMRGNTVMKGYLKNPEATAEAFRGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + H DGY+EIKDR KD+IISGGENIS+ E+E LY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVWHTDGYVEIKDRLKDIIISGGENISTIEVEDALYKHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK G + T E DI +CR + + VPKTVVF ELPKT+TGK+QK
Sbjct: 476 WGETPCAFIALKPGRED----TREADITSWCREHLAGFKVPKTVVF-GELPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL D A ++
Sbjct: 531 YVLRDRAKAL 540
>gi|380042372|gb|AFD33350.1| acyl-activating enzyme 6 [Cannabis sativa]
Length = 569
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 262/560 (46%), Positives = 352/560 (62%), Gaps = 16/560 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL F+ERAAT S+++ YTW QTYRRC Q AS+L++
Sbjct: 9 IDDLPKNAANYTALTPLWFLERAATIHPTRDSVVHGSRRYTWLQTYRRCRQFASALTTHS 68
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G V+VIAPNI A+YE HF VPM+GA+ N +N RL+A TI +L HS + V VD
Sbjct: 69 IALGSTVAVIAPNIHALYEAHFGVPMAGAVLNAVNIRLNASTIGFLLGHSLAAAVIVDQE 128
Query: 121 SSSLLLEVVSLFPP----HSKTPKLVLITDDKEISSSSSPPPRIPPA--DFVDTYENMLA 174
L E + + H K P LV+I D+ S P + A YE L
Sbjct: 129 FFPLAEEALKILAEERKSHYKPPLLVVIGDE------SCDPKNLEYALKRGAIEYEKFLE 182
Query: 175 KGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLL 234
GDP+FSW P+ + + L YT GTT++PKGVV ++ +++++ + + W + + ++ L
Sbjct: 183 GGDPEFSWEPPEDEWQSIALGYTSGTTASPKGVVLSHRGSYLMSLSAAVVWGMNEGAIYL 242
Query: 235 WTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS 294
WTLPMFH NGW +TWG A + TN+CLR+ A V++ I ++GVTH C AP+VLN + ++
Sbjct: 243 WTLPMFHCNGWCYTWGMAAMCGTNICLRQVTAKGVYSAIAEYGVTHFCAAPVVLNTIVNA 302
Query: 295 PEAKQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWN 351
P L V ++TAG+ PP VL GF V+H YG +E G + CAWKP+W+
Sbjct: 303 PAEDAILPLPHLVHVMTAGAAPPPSVLFAMSEKGFKVAHTYGLSETYGPSTICAWKPEWD 362
Query: 352 KLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDP 411
LP ++A L ARQGVR I L +D+VD +T SV DG T GEIVMRG ++M GYLK+P
Sbjct: 363 SLPPIKQARLNARQGVRYIALEGLDVVDTKTMKSVPADGTTMGEIVMRGNAVMKGYLKNP 422
Query: 412 EATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNE 471
+A + +G +++GD+ + HPDGY+EIKDRSKD+IISGGENISS E+E+ LY P V E
Sbjct: 423 KANKESFANGWFHSGDLAVKHPDGYIEIKDRSKDIIISGGENISSLEVENPLYLPPAVLE 482
Query: 472 AAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDEL 531
VV RPD W E PCAFV+LK D+ +DII++CR++ P Y VPK+VVF L
Sbjct: 483 VFVVARPDERWGESPCAFVTLKPNIDNSNEQGLAEDIIKFCRSKKPAYWVPKSVVF-GPL 541
Query: 532 PKTATGKVQKYVLGDIANSM 551
PKTATGK+QK+VL A M
Sbjct: 542 PKTATGKIQKHVLRTKAKEM 561
>gi|218192653|gb|EEC75080.1| hypothetical protein OsI_11221 [Oryza sativa Indica Group]
Length = 567
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 258/568 (45%), Positives = 359/568 (63%), Gaps = 17/568 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L AN LTPL F+ERAA A S+++ YTW+ TYRRC +LAS+L+
Sbjct: 7 IDDLPRGGANYTALTPLWFLERAALAHPARASVVHGPVRYTWADTYRRCRRLASALARRS 66
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ G V+VIAPNIPA+YE HF VPM+GA+ N +N RL+A T++ +L+HS +++V VD
Sbjct: 67 VGHGSTVAVIAPNIPAVYEAHFGVPMAGAVVNCVNIRLNAPTVAFLLEHSSAEVVMVDQE 126
Query: 121 SSSLLLEVVSLFPPHSK----TPKLVLITDDKEISSSSSPPPRIPPA--DFVDTYENMLA 174
SL + + + K P L++I D + P + A YE L
Sbjct: 127 FFSLAEDSLRIIAEQKKGAFKQPLLIVIGDQ------TCDPVSLKSALSKGAIEYEEFLE 180
Query: 175 KGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLL 234
GDP+F+W P+ + + L YT GTTS PKGVV ++ +++++ + W + + +V L
Sbjct: 181 TGDPEFAWKPPQDEWKSIALGYTSGTTSNPKGVVLHHRGAYLMSLSGALVWGMNEGAVYL 240
Query: 235 WTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS 294
WTLPMFH NGW +TW A + T++CLR+ A +F+ I GVTH CGAP+VLN + ++
Sbjct: 241 WTLPMFHCNGWCYTWTLAALCGTSICLRQVTAKAIFSAIANQGVTHFCGAPVVLNTIVNA 300
Query: 295 PEAKQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWN 351
P A L R V ++TAG+ PP VL LGF ++H YG +E G + CAWKP+W+
Sbjct: 301 PPADAILPLPRVVNVMTAGAAPPPSVLASMSKLGFRITHTYGLSETYGPSTVCAWKPEWD 360
Query: 352 KLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDP 411
+LP ERA L ARQG+R +GL +D+VDP+T V DG T GEIVMRG +M GYLK+P
Sbjct: 361 ELPDDERARLHARQGIRYVGLEGLDVVDPKTMAPVPADGSTLGEIVMRGNGVMKGYLKNP 420
Query: 412 EATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNE 471
A ++ ++G +++GD+G+ H DGY+E+KDR+KD+IISGGENISS E+E +Y HP V E
Sbjct: 421 RANAEAFENGWFHSGDLGVKHTDGYIEVKDRAKDIIISGGENISSLEVEKAVYQHPAVLE 480
Query: 472 AAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDEL 531
A+VV R D W E PCAFV+ K G DS DI+++CR R+P Y VPK+VVF L
Sbjct: 481 ASVVARADEQWGESPCAFVTPKDGADSSDEAALAGDIMRFCRERLPGYWVPKSVVF-GPL 539
Query: 532 PKTATGKVQKYVLGDIANSMS-MSHSRM 558
PKTATGK++K+ L A + + SRM
Sbjct: 540 PKTATGKIKKHELRAKAKELGPVRKSRM 567
>gi|392381899|ref|YP_005031096.1| putative AMP-binding enzyme [Azospirillum brasilense Sp245]
gi|356876864|emb|CCC97653.1| putative AMP-binding enzyme [Azospirillum brasilense Sp245]
Length = 551
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/553 (44%), Positives = 346/553 (62%), Gaps = 22/553 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN+ PL+PL F+ R A ++I+ TW++TY RC++LAS+L+ GI
Sbjct: 13 LDQNAANTVPLSPLSFLRRTAAVYPQRIAVIHGPVRRTWAETYERCVRLASALAKRGIGL 72
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+APN P +E HF VPM+GA+ N +N RLDA ++ IL+H E+K++ D S
Sbjct: 73 GDTVAVMAPNTPESFEAHFGVPMTGAVLNALNIRLDAEALAFILEHGEAKVLLTDREFSG 132
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFV--DTYENMLAKGDPQFS 181
++ + V + P K +V+ DD P+ + + TYE L GDP +
Sbjct: 133 VISKAVHMLEP--KRRPIVIDIDD----------PQAKGGELIGEQTYEQFLETGDPAYE 180
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + + LNYT GTT PKGVV ++ ++ A+ +++ W +P V LWTLPMFH
Sbjct: 181 WPMPADEWQAIALNYTSGTTGNPKGVVYHHRGAYLNAMGNVLTWAMPHHPVYLWTLPMFH 240
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQ 299
NGW F W + TNVC+R A ++ + GVTHMCGAPI++ L+ ++PE ++
Sbjct: 241 CNGWCFPWTVTAMAGTNVCVRTITAKGIYDALADLGVTHMCGAPIIMGLIVNAPEDQKRE 300
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+ R V+++TAG+ PPA V+ + E +GF V+H YG TE+ G CAW WN LP ERA
Sbjct: 301 IPRGVKMMTAGAAPPAAVIEKIERMGFDVTHVYGLTEVYGPVTICAWHEHWNDLPLEERA 360
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+LKARQGV L + + DP T ++DG T GEI MRG ++M GYLK+P AT +
Sbjct: 361 ALKARQGVNYATLEGLMVADPNTLQPTRKDGVTMGEIFMRGNTVMKGYLKNPRATQEAFS 420
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+G+ H DGY+E+KDRSKD+IISGGENIS+ E+ESVLY HP + EAAVV RPD
Sbjct: 421 GGWFHTGDLGVWHADGYIELKDRSKDIIISGGENISTIEVESVLYKHPDIVEAAVVARPD 480
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E PCAFV++K G TE ++I YCR + + P+TVVF LPKT+TGK+
Sbjct: 481 EKWGETPCAFVTVKEGKQ-----LTEAEVIAYCREHLAHFKCPRTVVFT-ALPKTSTGKI 534
Query: 540 QKYVLGDIANSMS 552
QKYVL D A +++
Sbjct: 535 QKYVLRDQARALN 547
>gi|215769242|dbj|BAH01471.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624776|gb|EEE58908.1| hypothetical protein OsJ_10547 [Oryza sativa Japonica Group]
Length = 567
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 258/568 (45%), Positives = 358/568 (63%), Gaps = 17/568 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L AN LTPL F+ERAA A S+++ YTW+ TYRRC +LAS+L
Sbjct: 7 IDDLPRGGANYTALTPLWFLERAALAHPARASVVHGPVRYTWADTYRRCRRLASALERRS 66
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ G V+VIAPNIPA+YE HF VPM+GA+ N +N RL+A T++ +L+HS +++V VD
Sbjct: 67 VGHGSTVAVIAPNIPAVYEAHFGVPMAGAVVNCVNIRLNAPTVAFLLEHSSAEVVMVDQE 126
Query: 121 SSSLLLEVVSLFPPHSK----TPKLVLITDDKEISSSSSPPPRIPPA--DFVDTYENMLA 174
SL + + + K P L++I D + P + A YE L
Sbjct: 127 FFSLAEDSLRIIAEQKKGAFKQPLLIVIGDQ------TCDPVSLKSALSKGAIEYEEFLE 180
Query: 175 KGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLL 234
GDP+F+W P+ + + L YT GTTS PKGVV ++ +++++ + W + + +V L
Sbjct: 181 TGDPEFAWKPPQDEWKSIALGYTSGTTSNPKGVVLHHRGAYLMSLSGALVWGMNEGAVYL 240
Query: 235 WTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS 294
WTLPMFH NGW +TW A + T++CLR+ A +F+ I GVTH CGAP+VLN + ++
Sbjct: 241 WTLPMFHCNGWCYTWTLAALCGTSICLRQVTAKAIFSAIANQGVTHFCGAPVVLNTIVNA 300
Query: 295 PEAKQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWN 351
P A L R V ++TAG+ PP VL LGF ++H YG +E G + CAWKP+W+
Sbjct: 301 PPADAILPLPRVVNVMTAGAAPPPSVLASMSKLGFRITHTYGLSETYGPSTVCAWKPEWD 360
Query: 352 KLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDP 411
+LP ERA L ARQG+R +GL +D+VDP+T V DG T GEIVMRG +M GYLK+P
Sbjct: 361 ELPDDERARLHARQGIRYVGLEGLDVVDPKTMAPVPADGSTLGEIVMRGNGVMKGYLKNP 420
Query: 412 EATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNE 471
A ++ ++G +++GD+G+ H DGY+E+KDR+KD+IISGGENISS E+E +Y HP V E
Sbjct: 421 RANAEAFENGWFHSGDLGVKHTDGYIEVKDRAKDIIISGGENISSLEVEKAVYQHPAVLE 480
Query: 472 AAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDEL 531
A+VV R D W E PCAFV+ K G DS DI+++CR R+P Y VPK+VVF L
Sbjct: 481 ASVVARADEQWGESPCAFVTPKDGADSSDEAALAGDIMRFCRERLPGYWVPKSVVF-GPL 539
Query: 532 PKTATGKVQKYVLGDIANSMS-MSHSRM 558
PKTATGK++K+ L A + + SRM
Sbjct: 540 PKTATGKIKKHELRAKAKELGPVRKSRM 567
>gi|380042378|gb|AFD33353.1| acyl-activating enzyme 9 [Cannabis sativa]
Length = 561
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 259/548 (47%), Positives = 353/548 (64%), Gaps = 11/548 (2%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+P+ F++R+A D PS++Y + YTWSQT+ RC +LAS++S GI+ GHVV+
Sbjct: 9 ANYVPLSPISFLKRSAIVYSDRPSVVYGNVQYTWSQTFERCKRLASAISHLGISSGHVVA 68
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
V+APNIPAMYELHF VPM+GAI T+N R D+ +S++L+HSE+K+ FVD+ +
Sbjct: 69 VLAPNIPAMYELHFGVPMAGAILCTLNIRHDSAMVSVLLRHSEAKVFFVDYQFLHIAQGA 128
Query: 129 VSLFPPH-SKTPKLVLI--TDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRP 185
+ + SK P LVLI DD ++S+ S A YE +L+ G+ F + P
Sbjct: 129 IDMLSKKGSKPPLLVLIPECDDDQLSTDISSSSNAISASVKLEYEQLLSTGNLDFEVIIP 188
Query: 186 KSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGW 245
K + DP+ LNYT GTTS+PKGV+ ++ ++ ++ ++ + V LW +PMFH NGW
Sbjct: 189 KDEWDPISLNYTSGTTSSPKGVIYSHRGAYLNSLAGVLLNEMHSMVVYLWCVPMFHCNGW 248
Query: 246 SFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLDRP 303
WG A G TNVCLR A +F I KH VTHM GAP VLN++ +S+ E K L
Sbjct: 249 CLPWGIAAQGGTNVCLRNVTAKGIFDSIAKHKVTHMGGAPTVLNMIINASATERKPLPSK 308
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
V I+T +PPP +L + E +GF V+H YG TE G C WKP+W+ LP +A LK+
Sbjct: 309 VSIMTGAAPPPPSLLFKMEEMGFNVTHSYGLTETYGPGTVCTWKPEWDSLPRDAQAKLKS 368
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQGV+ +G+ E+D+ DP T SV + + GE++ RG +M GYLK+ +AT + G +
Sbjct: 369 RQGVQHLGIEELDVKDPVTLKSVPANAKIIGEVMFRGNPVMNGYLKNVKATQEAFDGGWF 428
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
TGD+G+ HPDGY+E+KDRSKD+II GGENIS E+E VLYS P V EAAVV RPD W
Sbjct: 429 RTGDLGVKHPDGYVELKDRSKDIIIFGGENISPIEVEFVLYSPPAVFEAAVVPRPDDPWG 488
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E PCAFV++K G + GG +I +CR+ +P YM P+TV F D LPKT +GK QK+V
Sbjct: 489 ETPCAFVNVKRGCNVGG-----DEIFNFCRSCLPHYMAPRTVFFQD-LPKTFSGKGQKFV 542
Query: 544 LGDIANSM 551
D SM
Sbjct: 543 FRDKGKSM 550
>gi|339487949|ref|YP_004702477.1| acyl-CoA synthetase [Pseudomonas putida S16]
gi|338838792|gb|AEJ13597.1| acyl-CoA synthetase [Pseudomonas putida S16]
Length = 540
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 257/550 (46%), Positives = 345/550 (62%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N LTPL FIER A D P++I+ W QTY+RC +LAS+L GI
Sbjct: 8 LMPAAVNHVALTPLSFIERTAAVYGDYPAVIHGAIRRNWQQTYQRCRRLASALVGRGIGR 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM E HF VPM+GA+ NT+N RLDA I+ +L+H E+K++ D +
Sbjct: 68 GDTVAVMLPNIPAMLEAHFGVPMTGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDREFHT 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ ++L + P LV+ DD E + + D YE LA+GDP F+W
Sbjct: 128 VIEAALALL----EHPPLVVDVDDPEYGEGRA----VSELD----YEAFLAEGDPDFAWE 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ ++ A+ + + W + + V LWTLPMFH N
Sbjct: 176 WPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMVWGMGHRPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + T+V LR+ D + LIR+H V+H+CGAPIVLN L + PEA + ++
Sbjct: 236 GWCYPWTITALAGTHVFLRRVDPQKILTLIREHRVSHLCGAPIVLNALVNMPEAAKAAIE 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV+ + AG+ PPA V+ E +G V+H YG TE+ G CAW +W+ L ERA +
Sbjct: 296 HPVQAMVAGAAPPAKVIGAVEEMGIQVTHTYGLTEVYGPVTVCAWHDEWDDLSLEERARI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L + + DP+T V RDG T GEI MRG ++M GYLK+PEAT++ + G
Sbjct: 356 KSRQGVRYPTLDGLMVADPQTLEPVPRDGNTLGEIFMRGNTVMKGYLKNPEATAEAFRGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + H DGY+EIKDR KD+IISGGENIS+ E+E LY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVWHTDGYVEIKDRLKDIIISGGENISTIEVEDALYKHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+LK G + T E DI +CR + + VPKTVVF ELPKT+TGK+QK
Sbjct: 476 WGETPCAFVALKPGRED----TREADITSWCREHLAGFKVPKTVVF-GELPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL D A ++
Sbjct: 531 YVLRDRAKAL 540
>gi|217074538|gb|ACJ85629.1| unknown [Medicago truncatula]
gi|388493070|gb|AFK34601.1| unknown [Medicago truncatula]
Length = 566
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 258/557 (46%), Positives = 355/557 (63%), Gaps = 11/557 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL F+ERAA SII+ YTW QTY+RC + AS+LS+
Sbjct: 7 IDDLPKNAANYTSLTPLWFLERAAQVHPTRKSIIHGSRHYTWRQTYQRCRRFASALSNRS 66
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G+ V+VIAPNIPA+YE HF +PM+GA+ N +N RL+A TI+ +L H + +V VD
Sbjct: 67 IALGNTVAVIAPNIPALYEAHFGIPMAGAVINPVNIRLNASTIAFLLGHCTASVVIVDQE 126
Query: 121 SSSLLLEVVSLFPPHSKT---PKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD 177
SL E + ++ +KT P L++I D+ S R + YE+ L GD
Sbjct: 127 FFSLAEEALKIWSDKTKTFKSPILIVIGDENCDPKSL----RYALSKGAVEYEDFLRSGD 182
Query: 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
P+++W P+ + + L YT GTT++PKGVV ++ +++++ + W + + +V LWTL
Sbjct: 183 PEYNWKPPEDEWQSIALGYTSGTTASPKGVVLHHRGAYLMSLSGALIWGMNEGAVYLWTL 242
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
PMFH NGW +TW A + TN+CLR+ A V+ I K+ VTH C AP+VLN + ++P
Sbjct: 243 PMFHCNGWCYTWTLAALFGTNICLRQVSAKAVYEAIVKYKVTHFCAAPVVLNSIINAPAE 302
Query: 298 KQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLP 354
+ L V + TAG+ PP VL GF V+H YG +E G +V CAWKP+W+ LP
Sbjct: 303 ETILPLPHVVHVNTAGAAPPPSVLSGMSERGFRVTHTYGLSETYGPSVYCAWKPEWDPLP 362
Query: 355 ARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEAT 414
RA L ARQGV+ I L +D+V+ +T V DG+T GEIVMRG ++M GYLK+P+A
Sbjct: 363 PESRARLHARQGVKYIALEGLDVVNTKTMQPVPADGKTVGEIVMRGNAVMKGYLKNPKAN 422
Query: 415 SKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474
+ +G Y++GD+ + HPDGY+EIKDRSKD+IISG ENISS E+E+ LYSHP + E +V
Sbjct: 423 EESFANGWYHSGDLAVKHPDGYIEIKDRSKDIIISGAENISSVEVENALYSHPAILETSV 482
Query: 475 VGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKT 534
V RPD W E PCAFV+LK G D +DI+++CR ++P Y VPK+VVF LPKT
Sbjct: 483 VARPDEKWGESPCAFVTLKPGVDRSNEQRLVEDILKFCRTKMPTYWVPKSVVF-GPLPKT 541
Query: 535 ATGKVQKYVLGDIANSM 551
ATGKVQK++L A M
Sbjct: 542 ATGKVQKHLLRAKAKEM 558
>gi|338997524|ref|ZP_08636219.1| acyl-CoA synthetase [Halomonas sp. TD01]
gi|338765498|gb|EGP20435.1| acyl-CoA synthetase [Halomonas sp. TD01]
Length = 543
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 253/549 (46%), Positives = 344/549 (62%), Gaps = 18/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
+ P AN PL+PL FIER+A D P++++ T TW++T+ RC QLAS+L G+ P
Sbjct: 10 MPPTIANHVPLSPLTFIERSAAVYPDYPAVVHGTTRRTWAETWTRCRQLASALEKRGLQP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM+E HF VP++G + NT+N RLDA IS +L H E+K + VD +
Sbjct: 70 GQTVAAMLPNIPAMFEAHFGVPLAGCVLNTLNIRLDAEAISYMLAHGEAKAILVDPEFAQ 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + V+L L++ D E + + YE +LA+G+ +++
Sbjct: 130 VINDAVALL----DDKPLIIDVFDLEFLGETQGIGEV-------EYEALLAEGEADYAYT 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
PK + + LNYT GTT PKGVV ++ ++ AV ++++W +P V LWTLPMFH N
Sbjct: 179 LPKDEWQAISLNYTSGTTGKPKGVVYHHRGAYLNAVSNILEWAMPHHPVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLD 301
GW F W A +VCLRK D + LI VTH GAPIVLN L + P + ++ D
Sbjct: 239 GWCFPWTIAANAGVSVCLRKVDPKRINDLIVDEKVTHFSGAPIVLNGLVNLPADQKREFD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV++ TAG+ PPA V+ E LG V+H YG TE+ G CAW+ WN+LP RA +
Sbjct: 299 HPVKVTTAGAAPPASVIAGVEKLGIEVTHVYGLTEVYGPVTVCAWREAWNELPLESRAKI 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L + + DP + V +DG+T GEI+MRG ++M GYLK+ EAT K ++ G
Sbjct: 359 KARQGVRYHMLEALCVADPLSLEPVAKDGETIGEILMRGNNVMKGYLKNAEATEKALEGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
Y+TGD+ + H DGY+EIKDRSKD+IISGGENIS+ E+E +YSHP V EAAVV +PD
Sbjct: 419 WYHTGDLAVWHADGYIEIKDRSKDIIISGGENISTIEVEDAIYSHPAVEEAAVVAKPDEK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK G TE DII +CR + + VPKTV+F ELPKT+TGK+QK
Sbjct: 479 WGETPCAFVKLKIGYGE----ITEADIIAHCREHLASFKVPKTVIF-SELPKTSTGKIQK 533
Query: 542 YVLGDIANS 550
+VL + A
Sbjct: 534 FVLREEAKQ 542
>gi|224084042|ref|XP_002307202.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
gi|222856651|gb|EEE94198.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
Length = 570
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 256/579 (44%), Positives = 366/579 (63%), Gaps = 40/579 (6%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ L AN PL+P+ F+ER+AT D S++Y +TW++T++RCL+LAS+LS G
Sbjct: 1 MEGLVRCKANYAPLSPISFLERSATVYRDRTSVVYGSLKFTWAETHQRCLKLASALSQLG 60
Query: 61 INPGHVVS--------------------------VIAPNIPAMYELHFAVPMSGAIFNTI 94
I+ G VVS +APN+PAMYELHFAVPM+GA+F T+
Sbjct: 61 ISRGDVVSLFFCLFYFFFQQWGLSAAFHRLLQVAALAPNVPAMYELHFAVPMAGAVFCTL 120
Query: 95 NTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSS 154
NTR D+ +SI+LKHSE+K++FVDH + + L P +V++ + ++SS +
Sbjct: 121 NTRHDSNMVSILLKHSEAKIIFVDHQLLDIARGALDLLEKTGTKPPMVVLISESDVSSPT 180
Query: 155 SPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAF 214
+ YE++LA G F +P+S+ DP+ +NYT GTTS PKGVV ++
Sbjct: 181 GF------SSSSYEYESLLANGHSGFEIRQPESEWDPISVNYTSGTTSRPKGVVYSHRGA 234
Query: 215 FIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIR 274
++ + +L + V LWT+PMFH NGW TWG A G NVCLRK +F I
Sbjct: 235 YLNTLATLFLHGIGTTPVYLWTVPMFHCNGWCLTWGMAAQGGANVCLRKVSPKDIFDSID 294
Query: 275 KHGVTHMCGAPIVLNLL--SSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGY 332
+H VTHM GAP VL+++ S+ + K L V I+T G+PPP + + E LGF VSH Y
Sbjct: 295 QHKVTHMAGAPTVLSMIVNSAVSDKKPLPHKVEIMTGGAPPPPQIFFKMEKLGFGVSHLY 354
Query: 333 GKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQT 392
G TE G C+WKP+W+ LP ER+ +KARQGV+ +GL +VD+ D T SV DG+T
Sbjct: 355 GLTETYGPGTYCSWKPEWDSLPLNERSKMKARQGVQHLGLEDVDVKDTFTMESVPADGKT 414
Query: 393 RGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGE 452
GEI++RG ++M GYLKD +AT + G + +GD+ + H DGY+E+KDR+KD++I+GGE
Sbjct: 415 IGEIMLRGNTVMSGYLKDSKATEDAFRGGWFRSGDLAVKHSDGYIEVKDRAKDIVITGGE 474
Query: 453 NISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYC 512
N+ + E+E+VLY+HP + E AVVGRPD W + PCAFV L+ G D +DII++C
Sbjct: 475 NVCTLEVETVLYNHPAILEVAVVGRPDDLWGQTPCAFVKLREGFD-----VDAQDIIKFC 529
Query: 513 RARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSM 551
R R+P YM PKTV+F ++LP+ +TGKVQK++L + A ++
Sbjct: 530 RDRLPHYMAPKTVIF-EDLPRNSTGKVQKFILREKAKAL 567
>gi|167033374|ref|YP_001668605.1| acyl-CoA synthetase [Pseudomonas putida GB-1]
gi|166859862|gb|ABY98269.1| AMP-dependent synthetase and ligase [Pseudomonas putida GB-1]
Length = 540
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 255/550 (46%), Positives = 346/550 (62%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N LTPL FIER A + P++I+ W +TY+RCL+LAS+L+ GI
Sbjct: 8 LMPAAVNHVALTPLSFIERTAAVYGNYPAVIHGAIRRNWQETYQRCLRLASALAGRGIGR 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PN PAM E HF VPM GA+ NT+N RLDA I+ +L+H E+K++ D +
Sbjct: 68 GDTVAVMLPNTPAMLEAHFGVPMIGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDREFHA 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ ++L + P LV+ DD E + + D YE +LA+GDP F+W
Sbjct: 128 VIEAALALL----EHPPLVIDVDDPEYGEGRA----VSELD----YEALLAEGDPDFAWE 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ ++ A+ + + W + + V LWTLPMFH N
Sbjct: 176 WPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAMGHRPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + T+V LR+ D + LIR+H V+H+CGAPIVLN L + PEA + ++
Sbjct: 236 GWCYPWTITALAGTHVFLRRVDPQKILTLIREHRVSHLCGAPIVLNALVNMPEAAKAAIE 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV+ + AG+ PPA V+ E +G V+H YG TE+ G CAW +W+ L ERA +
Sbjct: 296 HPVQAMVAGAAPPAKVIGAVEEMGIKVTHTYGLTEVYGPVTVCAWHDEWDALSLDERARI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L + + DP+T V RDG T GEI MRG ++M GYLK+PEAT++ + G
Sbjct: 356 KSRQGVRYPTLDGLMVADPQTLQPVPRDGNTLGEIFMRGNTVMKGYLKNPEATAEAFRGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + H DGY+EIKDR KD+IISGGENIS+ E+E LY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVWHADGYVEIKDRLKDIIISGGENISTIEVEDALYKHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+LK G + T E DI +CR + + VPKTVVF ELPKT+TGK+QK
Sbjct: 476 WGETPCAFVALKPGRED----TRETDITSWCREHLAGFKVPKTVVF-GELPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL D A ++
Sbjct: 531 YVLRDRAKAL 540
>gi|429214206|ref|ZP_19205370.1| acyl-CoA synthetase [Pseudomonas sp. M1]
gi|428155801|gb|EKX02350.1| acyl-CoA synthetase [Pseudomonas sp. M1]
Length = 540
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 253/550 (46%), Positives = 345/550 (62%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N LTPL FIER A+ D ++I+ TW +TY+RC +LAS+L+ GI
Sbjct: 8 LAPASVNHTALTPLSFIERTASVYPDRTAVIHGSLRRTWRETYQRCRRLASALAWRGIGR 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PN P M E HFA+PM GA+ NT+N RLDA I+ +L+H E+K++ D
Sbjct: 68 GDTVAVMLPNTPQMLEAHFAIPMIGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDREFHD 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + P LV+ DD E P +D YE +LA+GDP+++W
Sbjct: 128 VIRAALGML----DHPPLVIDVDDPEYGEGE-------PVSSLD-YEALLAEGDPEYAWA 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + D + LNYT GTT PKGVV ++ ++ ++ + + W + + V LWTLPMFH N
Sbjct: 176 WPRDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNQMTWSMGQHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + T+VCLR+ D + LIR+H V+HMCGAPIVLN L + P++ + +D
Sbjct: 236 GWCYPWTVTALAGTHVCLRRVDPQKILTLIREHRVSHMCGAPIVLNALINMPDSAKAAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA V+ E +G V+H YG TE+ G CAW +W++LP ERA +
Sbjct: 296 HPVHAMVAGAAPPAKVIGAVEEMGIRVTHVYGLTEVYGPVTVCAWHEEWDELPLDERARI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L V + DP+T V RDGQ+ GEI MRG ++M GYLK+P AT + G
Sbjct: 356 KSRQGVRYPTLEGVMVADPKTLEPVPRDGQSVGEIFMRGNTVMKGYLKNPSATEEAFAGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + HPDGY+EI+DR KD+IISGGENIS+ E+E VL+ HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVWHPDGYVEIRDRLKDIIISGGENISTIEVEGVLFRHPAVLEAAVVARPDER 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+LK G T +I +CR + + VPKTVVF ELPKT+TGKVQK
Sbjct: 476 WGETPCAFVTLKAGHAD----TEAAQVIAFCREHLAGFKVPKTVVFT-ELPKTSTGKVQK 530
Query: 542 YVLGDIANSM 551
+VL D A +
Sbjct: 531 FVLRDWAQKL 540
>gi|409427828|ref|ZP_11262317.1| acyl-CoA synthetase [Pseudomonas sp. HYS]
Length = 540
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 251/550 (45%), Positives = 344/550 (62%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P P N L+PL FIER A P++I+ W QTY RC +LAS+L+ GI
Sbjct: 8 LAPAPVNHVALSPLSFIERTAAVYGQYPAVIHGAIRRNWQQTYERCRRLASALAGRGIGQ 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM E HF VPM GA+ N +N RLDA I+ +L+H E+K++ D
Sbjct: 68 GDTVAVMLPNIPAMLEAHFGVPMIGAVLNALNVRLDAEAIAFMLEHGEAKVLITDREFHK 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ ++L K P LV+ DD E + + D YE LA+GDP F+W
Sbjct: 128 VVEAALALM----KYPPLVIDVDDPEYGEGQA----VSDLD----YEAFLAEGDPAFAWH 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + LNYT GTT PKGVV ++ ++ A+ + + W + V LWTLPMFH N
Sbjct: 176 WPEDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAMGNHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + T+V LR+ D + LIR+H V+H+CGAPIVLN L + P++ + +D
Sbjct: 236 GWCYPWTVTALAGTHVFLRRVDPQKILTLIREHQVSHLCGAPIVLNALINMPDSAKAAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA V+ E +G V+H YG TE+ G CAW +W++ P ERA +
Sbjct: 296 HPVNAMVAGAAPPAKVIGAVEEMGIKVTHVYGLTEVYGPVTVCAWHAEWDEQPLAERARI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L + + DP+T V+RDG T GEI MRG ++M GYLK+PEAT++ + G
Sbjct: 356 KSRQGVRYPTLEGLMVADPQTLEPVQRDGNTLGEIFMRGNTVMKGYLKNPEATAEAFRGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + H DGY+EIKDR KD+IISGGENIS+ E+E LY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVWHADGYVEIKDRLKDIIISGGENISTIEVEDTLYKHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCA+++LK G + T E +II +CR + + +PKTVVF ELPKT+TGK+QK
Sbjct: 476 WGETPCAYITLKAGCEG----TREAEIIAFCREHLAGFKLPKTVVF-SELPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
Y+L D A ++
Sbjct: 531 YLLRDWAKAL 540
>gi|356529030|ref|XP_003533100.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
Length = 571
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 260/561 (46%), Positives = 355/561 (63%), Gaps = 14/561 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL F+ERAA S+++ YTW QTY+RC + AS+LS
Sbjct: 7 IDDLPKNNANHTALTPLWFLERAALVHPTRTSVVHGSRHYTWHQTYQRCRRFASALSKHS 66
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I GH V+VIAPNIPA+YE HF +PM+GA+ NTIN RL+A I+ +L HS + V VD
Sbjct: 67 IGLGHTVAVIAPNIPAIYEAHFGIPMAGAVLNTINIRLNAPAIAFLLAHSSAVAVIVDQE 126
Query: 121 SSSLLLEVVSLFPPHSKT---PKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD 177
++ E + ++ SK+ P L++I DD+ + A YE L GD
Sbjct: 127 FFTVAEESLKIWSEKSKSFKPPILIVIGDDENCHPKALTHAL---AKGAVEYEKFLESGD 183
Query: 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
P+F W P+ + + L YT GTT++PKGVV ++ +++++ + W + + +V LWTL
Sbjct: 184 PEFKWKPPQDEWQSIALGYTSGTTASPKGVVLHHRGAYLMSLSGALHWGMNEGAVYLWTL 243
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPE 296
PMFH NGW + W A + TN+CLR+ A V+A I K+ VTH C AP+VLN ++++SPE
Sbjct: 244 PMFHCNGWCYPWTLAALCGTNICLRQVTAKAVYAAIAKYKVTHFCAAPVVLNSIVNASPE 303
Query: 297 AKQLDRP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLP 354
L P V + TAG+ PP V+ GF V+H YG +E G + CAWKP+W LP
Sbjct: 304 EAILPLPHVVHVNTAGAAPPPSVIGAMSERGFRVTHTYGLSETYGPSTICAWKPEWESLP 363
Query: 355 ARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEAT 414
+R+ L ARQGVR I L +++++ ET V DG + GEIVMRG ++M GYLK+ +A
Sbjct: 364 IEQRSRLSARQGVRYIALEGLEVMNTETMKPVPADGASVGEIVMRGNAVMKGYLKNRKAN 423
Query: 415 SKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474
+ DG +++GD+ + HPDGY+EIKDRSKD+IISGGENISS E+E+VL+SHP V EA+V
Sbjct: 424 MEAFADGWFHSGDLAVKHPDGYIEIKDRSKDIIISGGENISSVEVENVLFSHPAVLEASV 483
Query: 475 VGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEK----DIIQYCRARIPRYMVPKTVVFIDE 530
V RPD W E PCAFV+LK G T EK DI+++CR+++P Y VPK+VVF
Sbjct: 484 VARPDEKWGESPCAFVTLKPAGMDGAASTNEKILAEDIVKFCRSKMPAYWVPKSVVF-GP 542
Query: 531 LPKTATGKVQKYVLGDIANSM 551
LPKTATGK QK +L A M
Sbjct: 543 LPKTATGKTQKQLLRTKAKEM 563
>gi|357144806|ref|XP_003573420.1| PREDICTED: acetyl-coenzyme A synthetase-like [Brachypodium
distachyon]
Length = 1037
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 251/556 (45%), Positives = 361/556 (64%), Gaps = 17/556 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDT-----TYTWSQTYRRCLQLASSLSSFGINP 63
AN PLTP+ F+ R+A D P+I+ D T TW +T RCL+LA++++ G+
Sbjct: 9 ANHAPLTPISFLIRSALVYPDRPAIVSADAGGAAPTRTWRETRARCLRLAAAIAGLGVQR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
HVV+V+A NIPAMYELHFAVPM+GA+ +N+RLDA S++L+HSE+KL+FVD
Sbjct: 69 HHVVAVLAQNIPAMYELHFAVPMAGAVICALNSRLDAAMASVLLRHSEAKLLFVDAALLP 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP--QFS 181
+ E + L P + ++ + ++++PPP A YE ++A G P F+
Sbjct: 129 VAAEALRLVSSAGANPPIAVLITELLDDNNTNPPPSSSSALIEHEYEALMAGGSPAEDFT 188
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
P+ + P+ LNYT GTTS PKGV+ ++ ++ ++ +++ + V LWT+PMFH
Sbjct: 189 IRWPEDENWPIALNYTSGTTSRPKGVIYSHRGAYLNSIAAVLLNDMAAMPVYLWTVPMFH 248
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS-----PE 296
NGW WG A G NVCLR+ V A + +HGVTH+ GAP VL+++++S PE
Sbjct: 249 CNGWCLAWGVAAQGGANVCLRRVTGAAVLAAVARHGVTHLGGAPTVLSMIANSADNTPPE 308
Query: 297 AKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
++ + V ++T G+PP VL R ESLGF+V H YG TE G C WKP+WN LPA
Sbjct: 309 PRKKKKKVVVMTGGAPPAPAVLHRMESLGFLVIHSYGLTETYGPATVCTWKPEWNSLPAA 368
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
ERA++K+RQG+ IGL E DI DP T SV DG+T GE++ RG ++M GY KDP AT++
Sbjct: 369 ERAAIKSRQGLHHIGL-ESDIKDPSTMRSVPPDGETMGEVMFRGNTVMSGYYKDPAATAE 427
Query: 417 CMKDGRYYTGDVGMMHP-DGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
G +GD+ + P DGY++IKDR KD++ISGGEN+S+ E+E+ L++HP V EAAVV
Sbjct: 428 SFAGGWLRSGDLAVRTPGDGYVKIKDRKKDIVISGGENVSTVEVEAALFAHPAVAEAAVV 487
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
GR D FW E PCAFV +K G G E +++++CR R+P +M P+TVVF++ELP+TA
Sbjct: 488 GRADEFWGETPCAFVVVKEGM---GEKVGEGEVVEFCRRRLPAFMAPRTVVFLEELPRTA 544
Query: 536 TGKVQKYVLGDIANSM 551
TGKV+K+ L ++A ++
Sbjct: 545 TGKVKKFELREMARAL 560
>gi|254237073|ref|ZP_04930396.1| hypothetical protein PACG_03110 [Pseudomonas aeruginosa C3719]
gi|392982144|ref|YP_006480731.1| acyl-CoA synthetase [Pseudomonas aeruginosa DK2]
gi|419756705|ref|ZP_14283050.1| acyl-CoA synthetase [Pseudomonas aeruginosa PADK2_CF510]
gi|424938926|ref|ZP_18354689.1| probable AMP-binding enzyme [Pseudomonas aeruginosa NCMG1179]
gi|126169004|gb|EAZ54515.1| hypothetical protein PACG_03110 [Pseudomonas aeruginosa C3719]
gi|346055372|dbj|GAA15255.1| probable AMP-binding enzyme [Pseudomonas aeruginosa NCMG1179]
gi|384396460|gb|EIE42878.1| acyl-CoA synthetase [Pseudomonas aeruginosa PADK2_CF510]
gi|392317649|gb|AFM63029.1| acyl-CoA synthetase [Pseudomonas aeruginosa DK2]
Length = 540
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 251/550 (45%), Positives = 349/550 (63%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N LTPL FIER A+ PS+I+ + W+QTY+RC +LAS+L+ GI
Sbjct: 8 LAPAAVNHIALTPLSFIERTASVYPHYPSVIHGNIRRDWAQTYQRCRRLASALAGRGIGQ 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIP M E H+ VPM GA+ NT+N RLDA I+ +L+H E+K++ D+
Sbjct: 68 GDTVAVMLPNIPEMLEAHYGVPMIGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDYEFHE 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + P LV+ +D E P +D YE +LA+GDPQF+W
Sbjct: 128 VIHAAIGML----DHPPLVVDVNDPEYGEGR-------PVGELD-YEALLAEGDPQFAWE 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + LNYT GTT PKGVV ++ ++ A+ + + W + + V LWTLPMFH N
Sbjct: 176 WPRDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWSMGQHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + +VCLR+ D V LIR+H V+H+CGAPIVLN L + P++ + +D
Sbjct: 236 GWCYPWTVTALAGVHVCLRRVDPQKVLTLIREHQVSHLCGAPIVLNALINMPDSAKAAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA V+ E +G V+H YG TE+ G CAW +W+ LP RA++
Sbjct: 296 HPVHAMVAGAAPPAKVIGAVEEMGIRVTHVYGLTEVYGPVTVCAWHGEWDDLPLERRAAI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L V + DP+T V RDGQ+ GEI MRG ++M GYLK+P AT + G
Sbjct: 356 KSRQGVRYPTLEGVMVADPKTLEPVPRDGQSIGEIFMRGNTVMKGYLKNPSATEEAFAGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + HPDGY+EI+DR KD+IISGGENIS+ E+E VLY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVCHPDGYIEIRDRLKDIIISGGENISTIELEGVLYRHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK +D G+ E +I+ +CR + + +P+TVVF ELPKT+TGK+QK
Sbjct: 476 WGETPCAFITLK--SDHQGL--AESEIVAFCREHLAAFKIPRTVVF-SELPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL + A ++
Sbjct: 531 YVLREWAAAL 540
>gi|116052235|ref|YP_788921.1| acyl-CoA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
gi|421172533|ref|ZP_15630299.1| acyl-CoA synthetase [Pseudomonas aeruginosa CI27]
gi|115587456|gb|ABJ13471.1| putative AMP-binding enzyme [Pseudomonas aeruginosa UCBPP-PA14]
gi|404537467|gb|EKA47063.1| acyl-CoA synthetase [Pseudomonas aeruginosa CI27]
Length = 540
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 250/550 (45%), Positives = 350/550 (63%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N LTPL FIER A+ P++I+ + W+QTY+RC +LAS+L+ GI
Sbjct: 8 LAPAAVNHIALTPLSFIERTASVYPHYPAVIHGNIRRDWAQTYQRCRRLASALAGRGIGQ 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIP M E H+ VPM GA+ NT+N RLDA I+ +L+H E+K++ D+
Sbjct: 68 GDTVAVMLPNIPEMLEAHYGVPMIGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDYEFHE 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + P LV+ +D E P +D YE +LA+GDPQF+W
Sbjct: 128 VIHAAIGML----DHPPLVVDVNDPEYGEGR-------PVGELD-YEALLAEGDPQFAWE 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + LNYT GTT PKGVV ++ ++ A+ + + W + + V LWTLPMFH N
Sbjct: 176 WPRDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWSMGQHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + +VCLR+ D V LIR+H V+H+CGAPIVLN L + P++ + +D
Sbjct: 236 GWCYPWTVTALAGVHVCLRRVDPQKVLTLIREHQVSHLCGAPIVLNALINMPDSAKAAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA V+ E +G V+H YG TE+ G CAW +W++LP RA++
Sbjct: 296 HPVHAMVAGAAPPAKVIGAVEEMGIRVTHVYGLTEVYGPVTVCAWHGEWDELPLERRAAI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L V + DP+T V RDGQ+ GEI MRG ++M GYLK+P AT + G
Sbjct: 356 KSRQGVRYPTLEGVMVADPKTLEPVPRDGQSIGEIFMRGNTVMKGYLKNPSATEEAFAGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + HPDGY+EI+DR KD+IISGGENIS+ E+E VLY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVCHPDGYIEIRDRLKDIIISGGENISTIELEGVLYRHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK +D G+ E +I+ +CR + + +P+TVVF ELPKT+TGK+QK
Sbjct: 476 WGETPCAFITLK--SDHQGL--AESEIVAFCREHLAAFKIPRTVVF-SELPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL + A ++
Sbjct: 531 YVLREWAAAL 540
>gi|8886956|gb|AAF80642.1|AC069251_35 F2D10.4 [Arabidopsis thaliana]
Length = 581
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 253/579 (43%), Positives = 361/579 (62%), Gaps = 39/579 (6%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ +PAN PLTP+ F++R+A D SI+Y YTW QT RC+++AS+LS G
Sbjct: 3 MEGTIKSPANYVPLTPISFLDRSAVVYADRVSIVYGSVKYTWRQTRDRCVRIASALSQLG 62
Query: 61 INPGHV-------------------------VSVIAPNIPAMYELHFAVPMSGAIFNTIN 95
I+ G V VSV+APN+PAM ELHF VPM+GA+ T+N
Sbjct: 63 ISTGDVLIPCYLEIFSVHRSKLSLLRFLILKVSVLAPNVPAMVELHFGVPMAGALLCTLN 122
Query: 96 TRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHS-KTPKLVLITDDKEISSSS 154
R D+ ++++L+HS +K++F DH + + K P LVLI + S S
Sbjct: 123 IRHDSSLVAVLLRHSGTKVIFADHQFLQIAEGACEILSNKGDKVPILVLIPEPLTQSVS- 181
Query: 155 SPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAF 214
R ++ + YE+++A G F +RP + D + +NYT GTTS+PKGVV ++
Sbjct: 182 ----RKKRSEEMMEYEDVVAMGKSDFEVIRPTDECDAISVNYTSGTTSSPKGVVYSHRGA 237
Query: 215 FIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIR 274
++ ++ +++ + LWT PMFH NGW WG +G TN+CLR A +F I
Sbjct: 238 YLNSLAAVLLNEMHSSPTYLWTNPMFHCNGWCLLWGVTAIGGTNICLRNVTAKAIFDNIS 297
Query: 275 KHGVTHMCGAPIVLNLLSSSPEAKQLDRP--VRILTAGSPPPAPVLLRTESLGFIVSHGY 332
+H VTHM GAP +LN++ ++PE++Q P V +T +PPPA V+ + E LGF + H Y
Sbjct: 298 QHKVTHMGGAPTILNMIINAPESEQKPLPGKVSFITGAAPPPAHVIFKMEELGFSMFHSY 357
Query: 333 GKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQT 392
G TE G C WKP+W+ LP E+A +KARQGV +GL E+ + DP T ++ DG T
Sbjct: 358 GLTETYGPGTICTWKPEWDSLPREEQAKMKARQGVNHLGLEEIQVKDPVTMRTLPADGVT 417
Query: 393 RGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGE 452
GE+V RG ++M GYLK+PEAT + K G +++GD+G+ HPDGY+E+KDRSKD+IISGGE
Sbjct: 418 MGEVVFRGNTVMNGYLKNPEATKEAFKGGWFWSGDLGVKHPDGYIELKDRSKDIIISGGE 477
Query: 453 NISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYC 512
NISS E+ES L++HP V EAAVV RPD +W E CAFV LK G+ + + +++I YC
Sbjct: 478 NISSIEVESTLFTHPCVLEAAVVARPDEYWGETACAFVKLKDGSKA-----SAEELISYC 532
Query: 513 RARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSM 551
R R+P YM P+++VF ++LPKT+TGKVQK+VL A ++
Sbjct: 533 RDRLPHYMAPRSIVF-EDLPKTSTGKVQKFVLRTKAKAL 570
>gi|410620979|ref|ZP_11331834.1| fatty-acyl-CoA synthase [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410159541|dbj|GAC27208.1| fatty-acyl-CoA synthase [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 544
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 254/556 (45%), Positives = 357/556 (64%), Gaps = 30/556 (5%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L AN L+P+ FI+RAA D ++++ DT W+QTY+RC Q+AS+L+ +GI
Sbjct: 10 ENLDKQRANFTALSPMTFIDRAAKVYPDRTAVVHGDTRRNWAQTYQRCQQMASALNKYGI 69
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
GH VS+IAPNIP +ELHFAVPM GA+ N+INTRLD++T + IL+H+E+K++FVD
Sbjct: 70 GKGHTVSLIAPNIPEHFELHFAVPMCGAVLNSINTRLDSQTFAFILQHAEAKVLFVDREF 129
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDD-----KEISSSSSPPPRIPPADFVDTYENMLAKG 176
S ++ + + + P + LV+ DD E+ S + YE LA G
Sbjct: 130 SEMVAKALDMIPNNY----LVIDIDDLYWQGGELIGSIN-------------YEAFLATG 172
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
+ + W P+ + D + LNYT GTT PKGVV ++ ++ A+ + + W + + + LWT
Sbjct: 173 ELSYHWQPPQDEWDAITLNYTSGTTGDPKGVVYHHRGAYLNAISNAMSWGMHQHPIYLWT 232
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
LPMFH NGW F W A++ NVCLR A T+F LI++ V + CGAPIVLN+L + +
Sbjct: 233 LPMFHCNGWCFPWTVALMAGVNVCLRHVRADTIFDLIKQEKVGYFCGAPIVLNMLKLADD 292
Query: 297 AKQ--LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLP 354
+ + ++ V ++TAG+PPPA V+ ESLGF V+H YG TE G +V CAW W++LP
Sbjct: 293 SVKSGIEHKVNVMTAGAPPPAAVIQGMESLGFKVTHVYGLTETYGPSVVCAWHDDWSELP 352
Query: 355 ARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEAT 414
++A LK+RQGVR L + + DP T V +DG T GEI M+G +M GYLK+P T
Sbjct: 353 LEKQAQLKSRQGVRAPMLDGLMVADPVTLKPVPQDGLTMGEIFMQGNLVMKGYLKNPTTT 412
Query: 415 SKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474
+K + G +++GD+ + H DGY+EIKDRSKD+IISGGENISS EIE VLY HP + EAAV
Sbjct: 413 NKAFEGGWFHSGDLAVWHADGYIEIKDRSKDIIISGGENISSIEIEDVLYRHPSIQEAAV 472
Query: 475 VGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKT 534
V W E PCAFV+LK G + T ++II +CR +PR+ P VVF ELPKT
Sbjct: 473 VAMEHVKWGETPCAFVTLKLGQSA-----TAREIINFCRDHMPRFKAPTRVVFA-ELPKT 526
Query: 535 ATGKVQKYVLGDIANS 550
+TGK++K+ L D+AN+
Sbjct: 527 STGKIKKFELRDMANN 542
>gi|8778599|gb|AAF79607.1|AC027665_8 F5M15.12 [Arabidopsis thaliana]
Length = 579
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 253/579 (43%), Positives = 361/579 (62%), Gaps = 39/579 (6%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ +PAN PLTP+ F++R+A D SI+Y YTW QT RC+++AS+LS G
Sbjct: 1 MEGTIKSPANYVPLTPISFLDRSAVVYADRVSIVYGSVKYTWRQTRDRCVRIASALSQLG 60
Query: 61 INPGHV-------------------------VSVIAPNIPAMYELHFAVPMSGAIFNTIN 95
I+ G V VSV+APN+PAM ELHF VPM+GA+ T+N
Sbjct: 61 ISTGDVLIPCYLEIFSVHRSKLSLLRFLILKVSVLAPNVPAMVELHFGVPMAGALLCTLN 120
Query: 96 TRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHS-KTPKLVLITDDKEISSSS 154
R D+ ++++L+HS +K++F DH + + K P LVLI + S S
Sbjct: 121 IRHDSSLVAVLLRHSGTKVIFADHQFLQIAEGACEILSNKGDKVPILVLIPEPLTQSVS- 179
Query: 155 SPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAF 214
R ++ + YE+++A G F +RP + D + +NYT GTTS+PKGVV ++
Sbjct: 180 ----RKKRSEEMMEYEDVVAMGKSDFEVIRPTDECDAISVNYTSGTTSSPKGVVYSHRGA 235
Query: 215 FIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIR 274
++ ++ +++ + LWT PMFH NGW WG +G TN+CLR A +F I
Sbjct: 236 YLNSLAAVLLNEMHSSPTYLWTNPMFHCNGWCLLWGVTAIGGTNICLRNVTAKAIFDNIS 295
Query: 275 KHGVTHMCGAPIVLNLLSSSPEAKQLDRP--VRILTAGSPPPAPVLLRTESLGFIVSHGY 332
+H VTHM GAP +LN++ ++PE++Q P V +T +PPPA V+ + E LGF + H Y
Sbjct: 296 QHKVTHMGGAPTILNMIINAPESEQKPLPGKVSFITGAAPPPAHVIFKMEELGFSMFHSY 355
Query: 333 GKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQT 392
G TE G C WKP+W+ LP E+A +KARQGV +GL E+ + DP T ++ DG T
Sbjct: 356 GLTETYGPGTICTWKPEWDSLPREEQAKMKARQGVNHLGLEEIQVKDPVTMRTLPADGVT 415
Query: 393 RGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGE 452
GE+V RG ++M GYLK+PEAT + K G +++GD+G+ HPDGY+E+KDRSKD+IISGGE
Sbjct: 416 MGEVVFRGNTVMNGYLKNPEATKEAFKGGWFWSGDLGVKHPDGYIELKDRSKDIIISGGE 475
Query: 453 NISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYC 512
NISS E+ES L++HP V EAAVV RPD +W E CAFV LK G+ + + +++I YC
Sbjct: 476 NISSIEVESTLFTHPCVLEAAVVARPDEYWGETACAFVKLKDGSKA-----SAEELISYC 530
Query: 513 RARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSM 551
R R+P YM P+++VF ++LPKT+TGKVQK+VL A ++
Sbjct: 531 RDRLPHYMAPRSIVF-EDLPKTSTGKVQKFVLRTKAKAL 568
>gi|418588083|ref|ZP_13152099.1| acyl-CoA synthetase [Pseudomonas aeruginosa MPAO1/P1]
gi|375041136|gb|EHS33852.1| acyl-CoA synthetase [Pseudomonas aeruginosa MPAO1/P1]
Length = 540
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 250/550 (45%), Positives = 349/550 (63%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N LTPL FIER A+ P++I+ + W+QTY+RC +LAS+L+ GI
Sbjct: 8 LAPAAVNHIALTPLSFIERTASVYPHYPAVIHGNIRRDWAQTYQRCRRLASALAGRGIGQ 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIP M E H+ VPM GA+ NT+N RLDA I+ +L+H E+K++ D+
Sbjct: 68 GDTVAVMLPNIPEMLEAHYGVPMIGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDYEFHE 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + P LV+ +D E P +D YE +LA+GDPQF+W
Sbjct: 128 VIHAAIGML----DHPPLVVDVNDPEYGEGR-------PVGELD-YEALLAEGDPQFAWE 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + LNYT GTT PKGVV ++ ++ A+ + + W + + V LWTLPMFH N
Sbjct: 176 WPRDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWSMGQHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + +VCLR+ D V LIR+H V+H+CGAPIVLN L + P++ + +D
Sbjct: 236 GWXYPWTVTALAGVHVCLRRVDPQKVLTLIREHQVSHLCGAPIVLNALINMPDSAKAAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA V+ E +G V+H YG TE+ G CAW +W+ LP RA++
Sbjct: 296 HPVHAMVAGAAPPAKVIGAVEEMGIRVTHVYGLTEVYGPVTVCAWHGEWDDLPLERRAAI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L V + DP+T V RDGQ+ GEI MRG ++M GYLK+P AT + G
Sbjct: 356 KSRQGVRYPTLEGVMVADPKTLEPVPRDGQSIGEIFMRGNTVMKGYLKNPSATEEAFAGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + HPDGY+EI+DR KD+IISGGENIS+ E+E VLY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVCHPDGYIEIRDRLKDIIISGGENISTIELEGVLYRHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK +D G+ E +I+ +CR + + +P+TVVF ELPKT+TGK+QK
Sbjct: 476 WGETPCAFITLK--SDHQGL--AESEIVAFCREHLAAFKIPRTVVF-SELPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL + A ++
Sbjct: 531 YVLREWAAAL 540
>gi|296387251|ref|ZP_06876750.1| acyl-CoA synthetase [Pseudomonas aeruginosa PAb1]
gi|416887472|ref|ZP_11922747.1| acyl-CoA synthetase [Pseudomonas aeruginosa 152504]
gi|334833179|gb|EGM12333.1| acyl-CoA synthetase [Pseudomonas aeruginosa 152504]
Length = 540
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 250/550 (45%), Positives = 350/550 (63%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N LTPL FIER A+ P++I+ + W+QTY+RC +LAS+L+ GI
Sbjct: 8 LAPAAVNHIALTPLSFIERTASVYPHYPAVIHGNIRRDWAQTYQRCRRLASALAGRGIGQ 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIP M E H+ VPM GA+ NT+N RLDA I+ +L+H E+K++ D+
Sbjct: 68 GDTVAVMLPNIPEMLEAHYGVPMIGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDYEFHE 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + P LV+ +D E P +D YE +LA+GDPQF+W
Sbjct: 128 VIHAAIGML----DHPPLVVDVNDPEYGEGR-------PVGELD-YEALLAEGDPQFAWE 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + LNYT GTT PKGVV ++ ++ A+ + + W + + V LWTLPMFH N
Sbjct: 176 WPRDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWSMGQHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + +VCLR+ D V LIR+H V+H+CGAPIVLN L + P++ + +D
Sbjct: 236 GWCYPWTVTALAGVHVCLRRVDPQKVLTLIREHQVSHLCGAPIVLNALINMPDSAKAAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA V+ E +G V+H YG TE+ G CAW +W++LP RA++
Sbjct: 296 HPVHAMVAGAAPPAKVIGAVEEMGIRVTHVYGLTEVYGPVTVCAWHGEWDELPLERRAAI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L V + DP+T V RDGQ+ GEI MRG ++M GYLK+P AT + G
Sbjct: 356 KSRQGVRYPTLEGVMVADPKTLEPVPRDGQSIGEIFMRGNTVMKGYLKNPSATGEAFAGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + HPDGY+EI+DR KD+IISGGENIS+ E+E VLY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVCHPDGYIEIRDRLKDIIISGGENISTIELEGVLYRHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK +D G+ E +I+ +CR + + +P+TVVF ELPKT+TGK+QK
Sbjct: 476 WGETPCAFITLK--SDHQGL--AESEIVAFCREHLAAFKIPRTVVF-SELPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL + A ++
Sbjct: 531 YVLREWAAAL 540
>gi|15227878|ref|NP_179356.1| putative AMP-binding protein [Arabidopsis thaliana]
gi|75313402|sp|Q9SEY5.1|AAE2_ARATH RecName: Full=Probable acyl-activating enzyme 2; AltName:
Full=AMP-binding protein 2; Short=AtAMPBP2
gi|20799713|gb|AAM28619.1|AF503761_1 adenosine monophosphate binding protein 2 AMPBP2 [Arabidopsis
thaliana]
gi|20198258|gb|AAM15484.1| putative amp-binding protein [Arabidopsis thaliana]
gi|26452396|dbj|BAC43283.1| putative acyl-CoA synthetase [Arabidopsis thaliana]
gi|29028964|gb|AAO64861.1| At2g17650 [Arabidopsis thaliana]
gi|330251567|gb|AEC06661.1| putative AMP-binding protein [Arabidopsis thaliana]
Length = 603
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 262/558 (46%), Positives = 353/558 (63%), Gaps = 12/558 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
++ L +PAN PL+P+ F+ER+A D S+++ +TW QTY+RCL+LAS+L++ G
Sbjct: 48 IEGLLRSPANFSPLSPITFLERSAKVYRDRTSLVFGSVKHTWFQTYQRCLRLASALTNLG 107
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I+ G VV+ +APN+PAM+ELHFAVPM+G I +NTRLD T+S++L HSE+K++FVDH
Sbjct: 108 ISRGDVVAALAPNVPAMHELHFAVPMAGLILCPLNTRLDPSTLSVLLAHSEAKILFVDHQ 167
Query: 121 SSSLLLEVVSLFPPHSKTPK---LVLITDDKEISSSSSPPPRIPPA--DFVDTYENMLAK 175
+ + L KT K LVLI+ + S + F YE +L
Sbjct: 168 LLEIAHGALDLLAKSDKTRKSLKLVLISQSNDDDDSDEDSSSTFASKYSFDYEYETLLKS 227
Query: 176 GDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLW 235
GD +F ++P+ + DP+ +NYT GTTS PKGVV ++ ++ ++ ++ + V LW
Sbjct: 228 GDSEFEIIKPRCEWDPISINYTSGTTSRPKGVVYSHRGAYLNSLATVFLHQMSVYPVYLW 287
Query: 236 TLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SS 293
T+PMFH NGW WG A G TN+CLRK +F I H VTHM GAP VLN++ +
Sbjct: 288 TVPMFHCNGWCLVWGVAAQGGTNICLRKVSPKMIFKNIAMHKVTHMGGAPTVLNMIVNYT 347
Query: 294 SPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKL 353
E K L V I+T GSPP +L + E LGF VSH YG TE G C WKP+W+ L
Sbjct: 348 VTEHKPLPHRVEIMTGGSPPLPQILAKMEELGFNVSHLYGLTETYGPGTHCVWKPEWDSL 407
Query: 354 PARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
ER LKARQGV+ +GL +D+ DP T +V DG T GE++ RG ++M GY KD EA
Sbjct: 408 SLEERTKLKARQGVQHLGLEGLDVKDPLTMETVPDDGLTMGEVMFRGNTVMSGYFKDIEA 467
Query: 414 TSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
T K + +++GD+ + +PDGY+EIKDR KDVIISGGENISS E+E VL SH V EAA
Sbjct: 468 TRKAFEGDWFHSGDLAVKYPDGYIEIKDRLKDVIISGGENISSVEVERVLCSHQAVLEAA 527
Query: 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPK 533
VV RPD W + PC FV LK G D+ ++II +CR +P YM PKT+VF D +PK
Sbjct: 528 VVARPDHHWGQTPCGFVKLKEGFDT----IKPEEIIGFCRDHLPHYMAPKTIVFGD-IPK 582
Query: 534 TATGKVQKYVLGDIANSM 551
T+TGKVQKY+L A+ M
Sbjct: 583 TSTGKVQKYLLRKKADEM 600
>gi|398806745|ref|ZP_10565645.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Polaromonas
sp. CF318]
gi|398087297|gb|EJL77890.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Polaromonas
sp. CF318]
Length = 550
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 261/550 (47%), Positives = 348/550 (63%), Gaps = 21/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTPL F++R A +I++ TW++T RC +LAS+L+ GI
Sbjct: 10 LAKTAANHVPLTPLNFLDRTADVYPQRTAIVHGSFRQTWAETRERCYRLASALARAGIQA 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS+IAPN PAM E HF VP+SGA+ N IN RLDA I+ IL+H E KL+ VD +S
Sbjct: 70 GDTVSIIAPNTPAMLEAHFGVPLSGAVLNAINCRLDADGIAFILRHGECKLLLVDREFAS 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT-YENMLAKGDPQFSW 182
L+ + P P V+ +D E + ++ DT YE+ LA GDP F
Sbjct: 130 LVRRALQGLP----HPPRVIDINDLEAPTGTA---------LGDTDYESFLAGGDPAFPG 176
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P + P+ LNYT GTT PKGVV ++ +++++ + DW +P+ V LWTLPMFH
Sbjct: 177 RWPADEWSPIALNYTSGTTGDPKGVVPSHRGTYLMSLLQMTDWALPRAPVYLWTLPMFHA 236
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQL 300
NGW FTW T+VCLRK A VFA I +HGV H C APIVL ++ +P + + L
Sbjct: 237 NGWCFTWAVTAAAGTHVCLRKVTAANVFAAIEEHGVDHFCAAPIVLAGIAGTPGDQRRPL 296
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
R VR+LTAGSPPPA VL ++GF V H +G TEI+G +SCAW+ W++LPA +++
Sbjct: 297 PRRVRVLTAGSPPPAAVLEAVGAMGFEVDHVFGITEISGTAISCAWQDGWDELPASQQSR 356
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
LKARQGVR L V + DP+T + V RDG + GE+++RG ++M+GYLK+P AT+K
Sbjct: 357 LKARQGVRAAALEAVRVADPDTLVPVPRDGASSGELLIRGNTVMMGYLKNPGATAKAFSG 416
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGDV +MH DG+L+I DRSKDVIISGGENISS E+E VLY V AAVV +PD
Sbjct: 417 GWFHTGDVAVMHADGHLQITDRSKDVIISGGENISSVEVEEVLYQLTGVLHAAVVAQPDG 476
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV LK + TE D++ +CR R+ + P+ V+F D LPKTATGK+Q
Sbjct: 477 KWGEVPCAFVELKAAAPA----ITEADVMAFCRERLAHFKCPRRVIFTD-LPKTATGKIQ 531
Query: 541 KYVLGDIANS 550
K+ L +A S
Sbjct: 532 KFRLRALAGS 541
>gi|421157821|ref|ZP_15617160.1| acyl-CoA synthetase [Pseudomonas aeruginosa ATCC 25324]
gi|404550230|gb|EKA58997.1| acyl-CoA synthetase [Pseudomonas aeruginosa ATCC 25324]
Length = 540
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 250/550 (45%), Positives = 349/550 (63%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N LTPL FIER A+ P++I+ + W+QTY+RC +LAS+L+ GI
Sbjct: 8 LAPAAVNHIALTPLSFIERTASVYPHYPAVIHGNIRRDWAQTYQRCRRLASALAGRGIGQ 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIP M E H+ VPM GA+ NT+N RLDA I+ +L+H E+K++ D+
Sbjct: 68 GDTVAVMLPNIPEMLEAHYGVPMIGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDYEFHE 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + P LV+ +D E P +D YE +LA+GDPQF+W
Sbjct: 128 VIHAAIGML----DHPPLVVDVNDPEYGEGR-------PVGELD-YEALLAEGDPQFAWE 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + LNYT GTT PKGVV ++ ++ A+ + + W + + V LWTLPMFH N
Sbjct: 176 WPRDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWSMGQHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + +VCLR+ D V LIR+H V+H+CGAPIVLN L + P++ + +D
Sbjct: 236 GWCYPWTVTALAGVHVCLRRVDPQKVLTLIREHQVSHLCGAPIVLNALINMPDSAKAAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA V+ E +G V+H YG TE+ G CAW +W+ LP RA++
Sbjct: 296 HPVHAMVAGAAPPAKVIGAVEEMGIRVTHVYGLTEVYGPVTVCAWHGEWDALPLERRAAI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L V + DP+T V RDGQ+ GEI MRG ++M GYLK+P AT + G
Sbjct: 356 KSRQGVRYPTLEGVMVADPKTLEPVPRDGQSIGEIFMRGNTVMKGYLKNPSATEEAFAGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + HPDGY+EI+DR KD+IISGGENIS+ E+E VLY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVCHPDGYIEIRDRLKDIIISGGENISTIELEGVLYRHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK +D G+ E +I+ +CR + + +P+TVVF ELPKT+TGK+QK
Sbjct: 476 WGETPCAFITLK--SDHQGL--AESEIVAFCREHLAAFKIPRTVVF-SELPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL + A ++
Sbjct: 531 YVLREWAAAL 540
>gi|15599393|ref|NP_252887.1| acyl-CoA synthetase [Pseudomonas aeruginosa PAO1]
gi|107103715|ref|ZP_01367633.1| hypothetical protein PaerPA_01004786 [Pseudomonas aeruginosa PACS2]
gi|218889473|ref|YP_002438337.1| acyl-CoA synthetase [Pseudomonas aeruginosa LESB58]
gi|254242879|ref|ZP_04936201.1| hypothetical protein PA2G_03649 [Pseudomonas aeruginosa 2192]
gi|313109646|ref|ZP_07795590.1| putative AMP-binding enzyme [Pseudomonas aeruginosa 39016]
gi|355639085|ref|ZP_09050927.1| hypothetical protein HMPREF1030_00013 [Pseudomonas sp. 2_1_26]
gi|386056808|ref|YP_005973330.1| acyl-CoA synthetase [Pseudomonas aeruginosa M18]
gi|386068299|ref|YP_005983603.1| acyl-CoA synthetase [Pseudomonas aeruginosa NCGM2.S1]
gi|416861852|ref|ZP_11914763.1| acyl-CoA synthetase [Pseudomonas aeruginosa 138244]
gi|418593752|ref|ZP_13157583.1| acyl-CoA synthetase [Pseudomonas aeruginosa MPAO1/P2]
gi|420137378|ref|ZP_14645361.1| acyl-CoA synthetase [Pseudomonas aeruginosa CIG1]
gi|421165678|ref|ZP_15623993.1| acyl-CoA synthetase [Pseudomonas aeruginosa ATCC 700888]
gi|421180920|ref|ZP_15638453.1| acyl-CoA synthetase [Pseudomonas aeruginosa E2]
gi|421518748|ref|ZP_15965422.1| acyl-CoA synthetase [Pseudomonas aeruginosa PAO579]
gi|9950409|gb|AAG07585.1|AE004836_4 probable AMP-binding enzyme [Pseudomonas aeruginosa PAO1]
gi|126196257|gb|EAZ60320.1| hypothetical protein PA2G_03649 [Pseudomonas aeruginosa 2192]
gi|218769696|emb|CAW25456.1| probable AMP-binding enzyme [Pseudomonas aeruginosa LESB58]
gi|310882092|gb|EFQ40686.1| putative AMP-binding enzyme [Pseudomonas aeruginosa 39016]
gi|334836529|gb|EGM15336.1| acyl-CoA synthetase [Pseudomonas aeruginosa 138244]
gi|347303114|gb|AEO73228.1| acyl-CoA synthetase [Pseudomonas aeruginosa M18]
gi|348036858|dbj|BAK92218.1| acyl-CoA synthetase [Pseudomonas aeruginosa NCGM2.S1]
gi|354832161|gb|EHF16161.1| hypothetical protein HMPREF1030_00013 [Pseudomonas sp. 2_1_26]
gi|375046339|gb|EHS38902.1| acyl-CoA synthetase [Pseudomonas aeruginosa MPAO1/P2]
gi|403249867|gb|EJY63340.1| acyl-CoA synthetase [Pseudomonas aeruginosa CIG1]
gi|404348230|gb|EJZ74579.1| acyl-CoA synthetase [Pseudomonas aeruginosa PAO579]
gi|404540831|gb|EKA50217.1| acyl-CoA synthetase [Pseudomonas aeruginosa ATCC 700888]
gi|404544622|gb|EKA53765.1| acyl-CoA synthetase [Pseudomonas aeruginosa E2]
gi|453043038|gb|EME90773.1| acyl-CoA synthetase [Pseudomonas aeruginosa PA21_ST175]
Length = 540
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 250/550 (45%), Positives = 349/550 (63%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N LTPL FIER A+ P++I+ + W+QTY+RC +LAS+L+ GI
Sbjct: 8 LAPAAVNHIALTPLSFIERTASVYPHYPAVIHGNIRRDWAQTYQRCRRLASALAGRGIGQ 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIP M E H+ VPM GA+ NT+N RLDA I+ +L+H E+K++ D+
Sbjct: 68 GDTVAVMLPNIPEMLEAHYGVPMIGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDYEFHE 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + P LV+ +D E P +D YE +LA+GDPQF+W
Sbjct: 128 VIHAAIGML----DHPPLVVDVNDPEYGEGR-------PVGELD-YEALLAEGDPQFAWE 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + LNYT GTT PKGVV ++ ++ A+ + + W + + V LWTLPMFH N
Sbjct: 176 WPRDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWSMGQHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + +VCLR+ D V LIR+H V+H+CGAPIVLN L + P++ + +D
Sbjct: 236 GWCYPWTVTALAGVHVCLRRVDPQKVLTLIREHQVSHLCGAPIVLNALINMPDSAKAAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA V+ E +G V+H YG TE+ G CAW +W+ LP RA++
Sbjct: 296 HPVHAMVAGAAPPAKVIGAVEEMGIRVTHVYGLTEVYGPVTVCAWHGEWDDLPLERRAAI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L V + DP+T V RDGQ+ GEI MRG ++M GYLK+P AT + G
Sbjct: 356 KSRQGVRYPTLEGVMVADPKTLEPVPRDGQSIGEIFMRGNTVMKGYLKNPSATEEAFAGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + HPDGY+EI+DR KD+IISGGENIS+ E+E VLY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVCHPDGYIEIRDRLKDIIISGGENISTIELEGVLYRHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK +D G+ E +I+ +CR + + +P+TVVF ELPKT+TGK+QK
Sbjct: 476 WGETPCAFITLK--SDHQGL--AESEIVAFCREHLAAFKIPRTVVF-SELPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL + A ++
Sbjct: 531 YVLREWAAAL 540
>gi|152987190|ref|YP_001346286.1| acyl-CoA synthetase [Pseudomonas aeruginosa PA7]
gi|452877421|ref|ZP_21954711.1| acyl-CoA synthetase [Pseudomonas aeruginosa VRFPA01]
gi|150962348|gb|ABR84373.1| probable AMP-binding enzyme [Pseudomonas aeruginosa PA7]
gi|452185832|gb|EME12850.1| acyl-CoA synthetase [Pseudomonas aeruginosa VRFPA01]
Length = 540
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 249/550 (45%), Positives = 350/550 (63%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N LTPL FIER A+ P++I+ + W+QTY+RC +LAS+L+ GI
Sbjct: 8 LAPASVNHIALTPLSFIERTASVYPHYPAVIHGNIRRDWAQTYQRCRRLASALAGRGIGQ 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIP M E H+ VPM GA+ NT+N RLDA I+ +L+H E+K++ D+
Sbjct: 68 GDTVAVMLPNIPEMLEAHYGVPMIGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDYEFHE 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + P LV+ +D E P +D YE +LA+GDPQF+W
Sbjct: 128 VIHAAIGML----DHPPLVVDVNDPEYGEGR-------PVGELD-YEALLAEGDPQFAWE 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + LNYT GTT PKGVV ++ ++ A+ + + W + + V LWTLPMFH N
Sbjct: 176 WPRDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWSMGQHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + +VCLR+ D + LIR+H V+H+CGAPIVLN L + P++ + +D
Sbjct: 236 GWCYPWTVTALAGVHVCLRRVDPQKILTLIREHQVSHLCGAPIVLNALINMPDSAKAAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA V+ E +G V+H YG TE+ G CAW +W++LP RA++
Sbjct: 296 HPVHAMVAGAAPPAKVIGAVEEMGIRVTHVYGLTEVYGPVTVCAWHGEWDELPLERRAAI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L V + DP+T V RDGQ+ GEI MRG ++M GYLK+P AT + G
Sbjct: 356 KSRQGVRYPTLEGVMVADPKTLEPVPRDGQSIGEIFMRGNTVMKGYLKNPSATEEAFAGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + HPDGY+EI+DR KD+IISGGENIS+ E+E VLY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVCHPDGYIEIRDRLKDIIISGGENISTIELEGVLYRHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK +D G+ E +I+ +CR + + +P+TVVF ELPKT+TGK+QK
Sbjct: 476 WGETPCAFITLK--SDHQGI--AESEIVAFCREHLAAFKIPRTVVF-SELPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL + A ++
Sbjct: 531 YVLREWAAAL 540
>gi|357120835|ref|XP_003562130.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Brachypodium
distachyon]
Length = 658
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 267/556 (48%), Positives = 358/556 (64%), Gaps = 31/556 (5%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTT----YTWSQTYRRCLQLASSLSS-FGINP 63
AN PLTP+ FIERAA D +++Y + +TW + RC+++ASSL++ FG+N
Sbjct: 110 ANYVPLTPISFIERAAAVYGDRAAVVYGEEARRRQWTWKEVRGRCVRVASSLATRFGVNR 169
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+V+ PN+PAMYELHFAVPM+GA+ T NTR DA +S +LKHS +K+ FVD SS
Sbjct: 170 GDVVAVLCPNVPAMYELHFAVPMAGAVLCTFNTRHDAAMVSALLKHSGAKVFFVD---SS 226
Query: 124 LL------LEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD 177
LL L ++ + P LV I+DD + S + YE ++
Sbjct: 227 LLGVGKAALRRLADQSGAASLPILVTISDDADSGDSDRRG---------NEYEVLIKNAP 277
Query: 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
F P ++LDP+ LNYT GTTS PKGV+ ++A ++ + +++ + + LWT+
Sbjct: 278 SGFDIRWPLNELDPIALNYTSGTTSRPKGVIYNHRATYLNTIATVLAYNITTMPTYLWTV 337
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS--P 295
PMFH NGW WG A+ G TN+CL F A +F I +H VTHM GAP VLN++ ++
Sbjct: 338 PMFHCNGWHLPWGVAMQGGTNICLHHFTAKVIFDNIARHRVTHMGGAPTVLNMIINAVIA 397
Query: 296 EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
+ K L V ++T G+PPP VL E LGFIV H YG TE G +C W P+W+ LPA
Sbjct: 398 DRKPLPGTVSVMTGGAPPPPHVLNGMEDLGFIVHHVYGLTETHGPTTACTWMPEWDVLPA 457
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
ERA LKARQGV IG+ +VD+ P+T SV DGQT GE++ RG ++M GY KD AT
Sbjct: 458 GERAQLKARQGVNHIGMQDVDVKSPDTMKSVPHDGQTVGEVMFRGNTIMSGYYKDINATK 517
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
+ M G +TGD+ + HPDGY+E+KDR+KD+IISGGENISS E+ES+++SHP V EAAVV
Sbjct: 518 ESMAGGWLHTGDLAVRHPDGYIELKDRAKDIIISGGENISSIEVESMIFSHPAVLEAAVV 577
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
RPD W E PCAFV LK G ++ TE +II +CR R+P YM PKTVVF ++LPKT+
Sbjct: 578 ARPDDHWGETPCAFVKLKDGANA-----TEAEIIGFCRERLPHYMAPKTVVF-EDLPKTS 631
Query: 536 TGKVQKYVLGDIANSM 551
TGK QK+VL + A +M
Sbjct: 632 TGKTQKFVLREKARAM 647
>gi|389685417|ref|ZP_10176741.1| AMP-binding domain protein [Pseudomonas chlororaphis O6]
gi|388551070|gb|EIM14339.1| AMP-binding domain protein [Pseudomonas chlororaphis O6]
Length = 540
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 251/550 (45%), Positives = 340/550 (61%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N L+PL FIER A D P++I+ TW+QTY RC +LAS+L+ GI
Sbjct: 8 LAPTAVNHIALSPLSFIERTAAVYPDYPAVIHGSIRRTWAQTYSRCRRLASALAGRGIGK 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V+V+ PNIPAM E HF VPM GA+ N +N RLDA I+ +L H E+K++ D
Sbjct: 68 NDTVAVMLPNIPAMLEAHFGVPMIGAVLNALNVRLDAEAIAFMLAHGEAKVLIADREFHE 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ V++ P LV+ DD E P +D YE LA+GDP F+W
Sbjct: 128 VIHAAVAML----DQPPLVIDLDDPEYGEGQ-------PVSELD-YEAFLAEGDPAFAWQ 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ ++ A+ + + W + V LWTLPMFH N
Sbjct: 176 WPDDEWQAIALNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAMGNHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + +V LR+ D + LIR+H VTH+CGAPIVLN L + P++ + +D
Sbjct: 236 GWCYPWTVTALAGVHVFLRRVDPQKILNLIREHQVTHLCGAPIVLNALVNMPDSAKAAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA V+ E +G V+H YG TE+ G CAW W++LP +RA +
Sbjct: 296 HPVNAMVAGAAPPAKVIGAVEEMGIKVTHVYGLTEVYGPVTLCAWHAAWDELPLEQRAQI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L V + DP+T RDGQT GEI MRG ++M GYLK+P AT++ + G
Sbjct: 356 KSRQGVRYPTLEGVMVADPKTLEPTPRDGQTIGEIFMRGNTVMKGYLKNPSATAEAFEGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G+ HPDGY+EI+DR KD+IISGGENIS+ E+E VLY HP V EAAVV RPD
Sbjct: 416 WFHTGDLGVTHPDGYVEIRDRLKDIIISGGENISTIELEGVLYRHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK +E II +CR + + VP+TVVF +LPKT+TGK+QK
Sbjct: 476 WGETPCAFITLKADHQQ----VSEAQIIAFCREHLAGFKVPRTVVF-SQLPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
+VL D+A ++
Sbjct: 531 FVLRDMAKNL 540
>gi|399522347|ref|ZP_10763011.1| fatty-acyl-CoA synthase [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399109781|emb|CCH39572.1| fatty-acyl-CoA synthase [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 539
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 253/544 (46%), Positives = 345/544 (63%), Gaps = 20/544 (3%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
N L+PL FIER A P++++ W++TY RC +LAS+L+ GI G V+V
Sbjct: 14 NHVALSPLSFIERTAAVYPHYPAVVHGSIRRNWAETYARCRRLASALAGRGIGQGDTVAV 73
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+ PNIPAM E+HF VPM GA+ NT+N RLDA IS +L+H E+K+V D ++ +
Sbjct: 74 MLPNIPAMLEVHFGVPMIGAVLNTLNVRLDAEAISFMLQHGEAKVVIADREFFDVIHAAI 133
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDL 189
+ P LV+ DD E + + D YE LA+GDP+F+W P +
Sbjct: 134 GML----DHPPLVIDVDDPEYGEGQA----VSDLD----YEAFLAEGDPEFAWQWPTDEW 181
Query: 190 DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249
+ LNYT GTT PKGVV ++ F+ A+ + + W + V LWTLPMFH NGW + W
Sbjct: 182 QAISLNYTSGTTGNPKGVVYHHRGAFLNAMGNQMTWAMGNHPVYLWTLPMFHCNGWCYPW 241
Query: 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP-EAKQ-LDRPVRIL 307
+ +V LR+ D + LIR VTH+CGAPIVLN L + P EAK +D PV+ +
Sbjct: 242 TITALAGVHVFLRRVDPAKILTLIRDEQVTHLCGAPIVLNALVNMPAEAKAAIDHPVKAM 301
Query: 308 TAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AG+ PPA V+ E +G V+H YG TE+ G CAW +W++LP ERA++KARQGV
Sbjct: 302 VAGAAPPAKVIGAVEEMGIAVTHVYGLTEVYGPVTLCAWHAEWDELPLEERATIKARQGV 361
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGD 427
R L V + DP+T V RDGQT GEI MRG ++M GYLK+P AT++ + G ++TGD
Sbjct: 362 RYPTLEGVMVADPKTLEPVPRDGQTIGEIFMRGNTVMKGYLKNPSATAEAFEGGWFHTGD 421
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+G+ H DGY+EI+DR KD+IISGGENIS+ E+E VLY HP V EAAVV RPD W E PC
Sbjct: 422 LGVCHADGYVEIRDRLKDIIISGGENISTIEVEGVLYRHPAVLEAAVVARPDEKWGETPC 481
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDI 547
AF++LKTG + ++ +I+ +CR + + VPKTVVF +LPKT+TGK+QK+VL D+
Sbjct: 482 AFITLKTGQQA-----SDSEIMSFCREHLAGFKVPKTVVFT-QLPKTSTGKIQKFVLRDM 535
Query: 548 ANSM 551
A ++
Sbjct: 536 AKAL 539
>gi|407782410|ref|ZP_11129623.1| acyl-CoA synthetase [Oceanibaculum indicum P24]
gi|407206140|gb|EKE76102.1| acyl-CoA synthetase [Oceanibaculum indicum P24]
Length = 541
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 253/552 (45%), Positives = 347/552 (62%), Gaps = 23/552 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
+ N AN PL+PL F+ER A+ D +++ TW + YRR +LAS+L+ GI
Sbjct: 9 MDKNAANYTPLSPLSFLERTASVYPDRIGVVHGTLKRTWREIYRRSRRLASALAQHGIGK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+APN+P M E HF VPM+GA+ N +NTRLDA TI+ IL+H E+K++ D +
Sbjct: 69 GDTVAVMAPNVPEMVECHFGVPMAGAVLNALNTRLDAATIAFILEHGEAKVLITDREFAG 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQFS 181
+ + + LV+ DD P P + + + YE +A GDP F+
Sbjct: 129 TIAAALK----QVRVRPLVIDIDD---------PLYDGPGEHLGSLDYEAFIADGDPDFA 175
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + D + LNYT GTT PKGVV ++ ++ A+ +++ W +P+ +V LWTLPMFH
Sbjct: 176 WHLPADEWDAISLNYTSGTTGDPKGVVYHHRGAYLNALGNVLAWNMPRHAVYLWTLPMFH 235
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD 301
NGW F W T+VCLR+ +A ++ HGVTH+CGAPIV+ LL ++ ++ D
Sbjct: 236 CNGWCFPWTVTAQAGTHVCLRRVEAKAIYDAFADHGVTHLCGAPIVMGLLVNAKPEERRD 295
Query: 302 RP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
P V ++TA +PPPA ++ E+LG V+H YG TE+ G V CAW+P+W+ LP E+A
Sbjct: 296 FPQQVEMMTAAAPPPASIIQGMEALGIKVTHVYGLTEVYGPVVVCAWQPEWDTLPVEEQA 355
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+KARQGV L + + DPET V D T GE+ MRG +M GYLK+P AT K +
Sbjct: 356 RIKARQGVNYPVLEGLMVADPETLAPVPADAATMGEVFMRGNVVMKGYLKNPAATEKAFR 415
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+G++HPDGY+E+KDRSKD+IISGGENIS+ E+E VLY HP V EAAVV RPD
Sbjct: 416 GGWFHTGDLGVLHPDGYVELKDRSKDIIISGGENISTIEVEGVLYRHPAVMEAAVVARPD 475
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E PCAFV+ K G TE +II +CR + + VPKTV+F D LPKT+TGKV
Sbjct: 476 EKWGETPCAFVNPKPGQS-----VTEAEIIAFCRQHLAGFKVPKTVIFGD-LPKTSTGKV 529
Query: 540 QKYVLGDIANSM 551
QK+VL D A +
Sbjct: 530 QKFVLRDKAREL 541
>gi|91786587|ref|YP_547539.1| AMP-dependent synthetase and ligase [Polaromonas sp. JS666]
gi|91695812|gb|ABE42641.1| AMP-dependent synthetase and ligase [Polaromonas sp. JS666]
Length = 550
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 263/549 (47%), Positives = 346/549 (63%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PLTPL F++R A +II+ TW++T RC +LAS+L GI
Sbjct: 10 LDRNAANHVPLTPLNFLDRTADVFPHRTAIIHGTFRQTWAETRDRCYRLASALVKLGIQA 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS+IAPN PAM E HF VP+SGA+ N IN RLDA I+ IL+H E KL+ VD S
Sbjct: 70 GDTVSIIAPNTPAMLEAHFGVPLSGAVLNAINCRLDADGIAFILRHGECKLLLVDREFSP 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L VV S P+++ I D + + ++ I D YE+ LA GDP F
Sbjct: 130 L---VVKALQGVSNPPRVIDINDLEAPAGAA-----IGETD----YESFLAGGDPAFPGR 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + P+ LNYT GTT PKGVV ++ +++++ + DW +P+ V LWTLPMFH N
Sbjct: 178 WPTDEWTPIALNYTSGTTGDPKGVVPSHRGTYLMSLLQMTDWALPRAPVYLWTLPMFHAN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW FTW T+VCLRK A VF I HGV H C APIV+ ++S+PEA++ P
Sbjct: 238 GWCFTWAITAAAGTHVCLRKVTAANVFTAISDHGVDHFCAAPIVMAGIASTPEAERRPLP 297
Query: 304 VRIL--TAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R+ TAGSPPPA VL ++GF V H +G TEI+G VSCAW+ +W++LPA ++ L
Sbjct: 298 RRVRVLTAGSPPPAAVLEAVRAMGFDVDHVFGITEISGTPVSCAWQTEWDELPADQQGRL 357
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
+ARQGVR L + + DP+T V RDG GEI++RG ++M+GYLK+P AT+K G
Sbjct: 358 QARQGVRAAALENLRVADPDTLEPVPRDGVATGEILIRGNTVMMGYLKNPGATAKAFAGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGDV ++HPDGY++I DRSKD+IISGGENISS E+E VLY V AAVV +PD
Sbjct: 418 WFHTGDVAVVHPDGYMQITDRSKDIIISGGENISSVEVEEVLYRLAGVLNAAVVAQPDDK 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK + TE D+I +CR R+ + P+ VVF ELPKTATGK+QK
Sbjct: 478 WGEVPCAFVELKPDAP----LLTEVDVISFCRDRLAHFKCPRRVVFA-ELPKTATGKIQK 532
Query: 542 YVLGDIANS 550
+ L ++A S
Sbjct: 533 FRLRELAGS 541
>gi|170695568|ref|ZP_02886712.1| AMP-dependent synthetase and ligase [Burkholderia graminis C4D1M]
gi|170139555|gb|EDT07739.1| AMP-dependent synthetase and ligase [Burkholderia graminis C4D1M]
Length = 550
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 253/549 (46%), Positives = 348/549 (63%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ NPAN PLTPL F++R A +II+ + TW+ T RC +LAS+L GI P
Sbjct: 10 LEKNPANHVPLTPLTFLDRTADVYPQRTAIIHGEFRQTWATTRERCYRLASALVQLGIEP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS+IAPN PAM E HF VP+SGA+ N IN RLDA I+ IL+H E KL+ VD ++
Sbjct: 70 GDTVSIIAPNTPAMLEAHFGVPLSGAVLNAINCRLDADGIAFILRHGECKLLLVDREFAA 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L+ + + P P+L+ I D + ++ I D YE++LA GDP F+
Sbjct: 130 LVEKALQSVP---NPPRLIDINDHEAPDGAA-----IGETD----YESLLASGDPAFAGR 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + P+ LNYT GTT PKGVV ++ +++++ + +W +P+ + LWTLPMFH N
Sbjct: 178 GPVDEWTPIALNYTSGTTGDPKGVVPSHRGTYLMSLLQMTNWPLPRAPIYLWTLPMFHAN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW FTW T+VCLRK +A + + I+KHGV H C APIVL ++S P++++ L
Sbjct: 238 GWCFTWAITAAAGTHVCLRKVNAANILSAIQKHGVDHFCAAPIVLAGIASMPQSERQPLP 297
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R VR+LTAGSP PA VL ++GF V H +G TEI+G +SCAW +W+ LP ++ L
Sbjct: 298 RRVRVLTAGSPAPAAVLEAVGAMGFDVDHVFGITEISGTPISCAWHDEWDTLPPEQQGKL 357
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR ++ + D T V D Q+ GE+++RG ++M+GYLK+ +AT K G
Sbjct: 358 KARQGVRAAAFEKMSVADLATLEPVPADSQSCGEVLVRGNTVMMGYLKNADATEKAFAGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ ++HPDGY++I DRSKDVIISGGENISS E+E V+Y V AAVV +PD
Sbjct: 418 WFHTGDLAVVHPDGYIQITDRSKDVIISGGENISSVEVEEVIYRMSGVLNAAVVAQPDDT 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF+ LK TE+D+I +CR R+ + P+ VVF ELPKTATGK+QK
Sbjct: 478 WGETPCAFIELK----PDAAYITEQDVISFCRERLAHFKCPRRVVF-GELPKTATGKIQK 532
Query: 542 YVLGDIANS 550
+ L + A S
Sbjct: 533 FRLREQAGS 541
>gi|421151816|ref|ZP_15611416.1| acyl-CoA synthetase [Pseudomonas aeruginosa ATCC 14886]
gi|451987165|ref|ZP_21935324.1| Long-chain-fatty-acid--CoA ligase [Pseudomonas aeruginosa 18A]
gi|404526541|gb|EKA36749.1| acyl-CoA synthetase [Pseudomonas aeruginosa ATCC 14886]
gi|451755161|emb|CCQ87847.1| Long-chain-fatty-acid--CoA ligase [Pseudomonas aeruginosa 18A]
Length = 540
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 248/550 (45%), Positives = 346/550 (62%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N LTPL FIER A+ P++I+ + W+QTY+RC +LAS+L+ GI
Sbjct: 8 LAPAAVNHIALTPLSFIERTASVYPHYPAVIHGNIRRDWAQTYQRCRRLASALAGRGIGQ 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIP M E H+ VPM GA+ NT+N RLDA I+ +L+H E+K++ D+
Sbjct: 68 GDTVAVMLPNIPEMLEAHYGVPMIGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDYEFHE 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + P LV+ +D E P +D YE +LA+GDPQF+W
Sbjct: 128 VIHAAIGML----DHPPLVVDVNDPEYGEGR-------PVGELD-YEALLAEGDPQFAWE 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + LNYT GTT PKGVV ++ ++ A+ + + W + + V LWTLPMFH N
Sbjct: 176 WPRDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWSMGQHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + +VCLR+ D V LIR+H V+H+CGAPIVLN L + P++ + +D
Sbjct: 236 GWCYPWTVTALAGVHVCLRRVDPQKVLTLIREHQVSHLCGAPIVLNALINMPDSAKAAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA V+ E +G V+H YG TE+ G CAW +W+ LP RA++
Sbjct: 296 HPVHAMVAGAAPPAKVIGAVEEMGIRVTHVYGLTEVYGPVTVCAWHGEWDDLPLERRAAI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L V + DP+T V RDGQ+ GEI MRG ++M GYLK+P AT + G
Sbjct: 356 KSRQGVRYPTLEGVMVADPKTLEPVPRDGQSIGEIFMRGNTVMKGYLKNPSATEEAFAGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + HPDGY+EI+DR KD+IISGGENIS+ E+E VLY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVCHPDGYIEIRDRLKDIIISGGENISTIELEGVLYRHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK+ E +I+ +CR + + +P+TVVF ELPKT+TGK+QK
Sbjct: 476 WGETPCAFITLKSNHQG----LAESEIVAFCREHLAAFKIPRTVVF-SELPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL + A ++
Sbjct: 531 YVLREWAAAL 540
>gi|126667866|ref|ZP_01738832.1| acyl-CoA synthase [Marinobacter sp. ELB17]
gi|126627682|gb|EAZ98313.1| acyl-CoA synthase [Marinobacter sp. ELB17]
Length = 542
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 260/551 (47%), Positives = 349/551 (63%), Gaps = 19/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P AN TP+ FI R A+ D P+II+ TW++T+ R L+LAS+L GI
Sbjct: 9 LTPVDANYAVQTPIDFITRTASVYPDYPAIIHGAIRRTWAETHERSLRLASALVGRGIKK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM E HF VPM+GA+ N +N RLDA I+ +L+H+E+K++ VD
Sbjct: 69 GDTVAVMLPNIPAMVECHFGVPMTGAVMNALNVRLDAEVIAYMLEHAEAKVILVDREFGE 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++LE VS K P L++ DD E + +D YE L +GDP++ W
Sbjct: 129 VILEAVSRL---DKKP-LIIDVDDPEYGEG------VKVSDL--DYEAFLQEGDPEYQWD 176
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++ ++ + W + V LWTLPMFH N
Sbjct: 177 MPTDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNTAVWSMAMHPVYLWTLPMFHCN 236
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W + T+VCLR+ D + LIR+H VTHMCGAPIVLN L + P A + +D
Sbjct: 237 GWCFPWTITAMAGTHVCLRRVDPEKILQLIREHRVTHMCGAPIVLNALLNVPPASKAGID 296
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ + AG+PPPA V+ E +G ++H YG TE+ G CAWK +WN LP ERA++
Sbjct: 297 HVVKAMVAGAPPPAQVIGAVEEMGIALTHTYGLTEVYGPVTVCAWKDRWNDLPLAERAAI 356
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L I DP T +DG+T GEI +RG ++M GYLK+P+AT + + G
Sbjct: 357 KSRQGVRYHTLGGTMIADPGTMKPTPKDGKTIGEIFLRGNTVMKGYLKNPKATEEAFRGG 416
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + H DGY+EIKDR KD+IISGGENIS+ EIE+VLY HP V EAAVV RPD
Sbjct: 417 WFHTGDLAVWHEDGYMEIKDRLKDIIISGGENISTIEIENVLYRHPAVMEAAVVARPDEK 476
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+LK D+G + TE +I +CR + R+ VPKTVVF D LPKT+TGKVQK
Sbjct: 477 WGETPCAFVTLK--PDAGNV--TEAAMIDFCRKHMARFKVPKTVVFSD-LPKTSTGKVQK 531
Query: 542 YVLGDIANSMS 552
++L + A +
Sbjct: 532 FLLREQAKEIK 542
>gi|148547442|ref|YP_001267544.1| acyl-CoA synthetase [Pseudomonas putida F1]
gi|397695070|ref|YP_006532951.1| acyl-CoA synthetase [Pseudomonas putida DOT-T1E]
gi|421521612|ref|ZP_15968264.1| acyl-CoA synthetase [Pseudomonas putida LS46]
gi|148511500|gb|ABQ78360.1| AMP-dependent synthetase and ligase [Pseudomonas putida F1]
gi|397331800|gb|AFO48159.1| acyl-CoA synthetase [Pseudomonas putida DOT-T1E]
gi|402754527|gb|EJX15009.1| acyl-CoA synthetase [Pseudomonas putida LS46]
Length = 540
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 252/550 (45%), Positives = 345/550 (62%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N LTPL FIER A + P++I+ W +TY+RC +LAS+L+ GI
Sbjct: 8 LMPAAVNHVALTPLSFIERTAAVYGNYPAVIHGAIRRNWQETYQRCRRLASALAGRGIGR 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PN P M E HF VPM+GA+ NT+N RLDA I+ +L+H E+K++ D +
Sbjct: 68 GDTVAVMLPNTPTMLEAHFGVPMTGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDREFHA 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ ++L + P LV+ DD E + + D YE +L +GDP+F+W
Sbjct: 128 VIEGALALL----EHPPLVVDVDDPEYGEGRA----VSQLD----YEALLNEGDPEFAWE 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ ++ A+ + + W + + V LWTLPMFH N
Sbjct: 176 WPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAMGHRPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + T+V LR+ D + LIR+H V+H+CGAPIVLN L + PEA + ++
Sbjct: 236 GWCYPWTITALAGTHVFLRRVDPQKILTLIREHKVSHLCGAPIVLNALVNMPEAAKAAIE 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV+ + AG+ PPA V+ E +G V+H YG TE+ G CAW +W+ L ERA +
Sbjct: 296 HPVQAMVAGAAPPAKVIGAVEEMGIKVTHTYGLTEVYGPVTVCAWHDEWDALSLEERARI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L + + DP+T V RDG T GEI MRG ++M GYLK+PEAT++ + G
Sbjct: 356 KSRQGVRYPTLDGLMVADPQTLQPVPRDGNTLGEIFMRGNTVMKGYLKNPEATAEAFRGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + H DGY+EIKDR KD+IISGGENIS+ E+E LY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVWHADGYIEIKDRLKDIIISGGENISTIEVEDALYKHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+LK G + T E DI +CR + + VPKTVVF ELPKT+TGK+QK
Sbjct: 476 WGETPCAFVALKPGRED----TREADITSWCREHLAGFKVPKTVVF-GELPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL D A ++
Sbjct: 531 YVLRDRAKAL 540
>gi|386011805|ref|YP_005930082.1| Acyl-CoA synthetase [Pseudomonas putida BIRD-1]
gi|313498511|gb|ADR59877.1| Acyl-CoA synthetase [Pseudomonas putida BIRD-1]
Length = 540
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 252/550 (45%), Positives = 345/550 (62%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N LTPL FIER A + P++I+ W +TY+RC +LAS+L+ GI
Sbjct: 8 LMPAAVNHVALTPLSFIERTAAVYGNYPAVIHGAIRRNWQETYQRCRRLASALAGRGIGR 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PN P M E HF VPM+GA+ NT+N RLDA I+ +L+H E+K++ D +
Sbjct: 68 GDTVAVMLPNTPTMLEAHFGVPMTGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDREFHA 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ ++L + P LV+ DD E + + D YE +L +GDP+F+W
Sbjct: 128 VIEGALALL----EHPPLVVDVDDPEYGEGRA----VSQLD----YEALLNEGDPEFAWE 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ ++ A+ + + W + + V LWTLPMFH N
Sbjct: 176 WPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAMGHRPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + T+V LR+ D + LIR+H V+H+CGAPIVLN L + PEA + ++
Sbjct: 236 GWCYPWTITALAGTHVFLRRVDPQKILTLIREHKVSHLCGAPIVLNALVNMPEAAKAAIE 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV+ + AG+ PPA V+ E +G V+H YG TE+ G CAW +W+ L ERA +
Sbjct: 296 HPVQAMVAGAAPPAKVIGAVEQMGIKVTHTYGLTEVYGPVTVCAWHDEWDALSLEERARI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L + + DP+T V RDG T GEI MRG ++M GYLK+PEAT++ + G
Sbjct: 356 KSRQGVRYPTLDGLMVADPQTLQPVPRDGDTLGEIFMRGNTVMKGYLKNPEATAEAFRGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + H DGY+EIKDR KD+IISGGENIS+ E+E LY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVWHADGYIEIKDRLKDIIISGGENISTIEVEDALYKHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+LK G + T E DI +CR + + VPKTVVF ELPKT+TGK+QK
Sbjct: 476 WGETPCAFVALKPGRED----TREADITSWCREHLAGFKVPKTVVF-GELPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL D A ++
Sbjct: 531 YVLRDRAKAL 540
>gi|452965784|gb|EME70802.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Magnetospirillum sp. SO-1]
Length = 541
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 256/552 (46%), Positives = 350/552 (63%), Gaps = 20/552 (3%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L NPAN PLTPLGF+ER+A+ D S+I+ + +TW QTY RC +L S+L++ G+
Sbjct: 7 HLDKNPANYVPLTPLGFLERSASVYPDRVSVIHGELRFTWKQTYERCRRLGSALAARGVG 66
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G V+V+A N PA YE F VPM+G + +N RLDA I+ +L H E+K++ D +
Sbjct: 67 VGDTVAVMAANTPAAYEAAFGVPMTGGVLCALNIRLDAEAIAFMLDHGEAKVLLTDREFA 126
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
+ + +SL +K P +V+ DD ++S YE +A GDP ++W
Sbjct: 127 PTIRKALSLV---AKKP-IVIDIDDAAVTSGEMLGEM--------EYEAFIAGGDPDYAW 174
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
V P + D + LNYT GTT PKGVV ++ +I A+ ++++W + V LWTLPMFH
Sbjct: 175 VWPADEWDAIALNYTSGTTGNPKGVVYHHRGAYINALGNVVNWGMTGHPVYLWTLPMFHC 234
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--L 300
NGW F W A + TNVCLR+ D +FA I H VTHMCGAPIV+ +L ++PE + L
Sbjct: 235 NGWCFPWTLAALAGTNVCLRRVDGGHMFAAIETHKVTHMCGAPIVMGMLINAPEKDRRPL 294
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
PV +TA +PPPA V+ R ES GF ++H YG TE+ G CAW +W++LP ERA
Sbjct: 295 PHPVEFMTAAAPPPAAVIGRLESQGFKITHVYGLTEVYGPATVCAWHEEWDELPLDERAR 354
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
+K+RQGVR + + + DP T + V +DG T GE+ RG +M GYLK+P AT +
Sbjct: 355 MKSRQGVRYVNEEAMMVADPVTLVPVPQDGVTMGEVFYRGNVVMKGYLKNPAATQEAFSG 414
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+G+ H DGY+E+KDRSKD+IISGGENIS+ E+E VLY HP V EAAVV RPD
Sbjct: 415 GWFHTGDLGVWHADGYIELKDRSKDIIISGGENISTIEVEGVLYQHPAVGEAAVVARPDE 474
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E PCAF+ LK G + T +II +CR R+ Y P+TVVF LPKT+TGKVQ
Sbjct: 475 KWGETPCAFIGLKEGATA-----TADEIIAFCRQRLAHYKCPRTVVFTS-LPKTSTGKVQ 528
Query: 541 KYVLGDIANSMS 552
K+VL ++A ++
Sbjct: 529 KFVLREMAKKIN 540
>gi|390573408|ref|ZP_10253583.1| AMP-dependent synthetase and ligase [Burkholderia terrae BS001]
gi|389934633|gb|EIM96586.1| AMP-dependent synthetase and ligase [Burkholderia terrae BS001]
Length = 550
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 252/549 (45%), Positives = 345/549 (62%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ N AN PLTPL F++R A + +I++ D TW++T RC + AS+L GI P
Sbjct: 10 LEKNAANHVPLTPLTFLDRTADVYPNRTAIVHGDFRQTWAKTRERCYRFASALVQLGIEP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS+IAPN PAM E HF VP+SGA+ N IN RLDA I+ IL+H E KL+ VD +
Sbjct: 70 GDTVSIIAPNTPAMLEAHFGVPLSGAVLNAINCRLDADGIAFILRHGECKLLLVDRELAP 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L+ + + P P V+ +D E PA YE++LA GDP F+
Sbjct: 130 LVEKALQSVP----NPPRVIDINDHEAPDG--------PAIGETDYESLLASGDPAFAGR 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
RP + P+ LNYT GTT PKGVV ++ +++++ + +W +P+ + LWTLPMFH N
Sbjct: 178 RPVDEWTPIALNYTSGTTGDPKGVVPSHRGTYLMSLLQMTNWPLPRAPIYLWTLPMFHAN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLD 301
GW FTW T+VCLRK +A + + I +HGV H C APIVL ++S P E + L
Sbjct: 238 GWCFTWAITAAAGTHVCLRKVNAANILSAIAEHGVDHFCAAPIVLAGIASVPQSELQPLP 297
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
VR+LTAGSP PA VL ++GF V H +G TEI+G +SCAW +W+ LP ++ L
Sbjct: 298 HRVRVLTAGSPAPAAVLEAVGAMGFDVDHVFGITEISGTPISCAWHDEWDTLPPEQQGKL 357
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L ++ + D T V D ++ GE+++RG ++M+GY K+PEAT+K G
Sbjct: 358 KARQGVRAAALEKMSVADAATLEPVPADCKSCGEVLVRGNTVMMGYFKNPEATAKAFGGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ ++HPDGY++I DRSKDVIISGGENISS E+E V+Y P V AAVV +PD
Sbjct: 418 WFHTGDLAVVHPDGYIQITDRSKDVIISGGENISSVEVEEVIYRMPGVLNAAVVAQPDDK 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF+ LK S TE+D+I +CR R+ + P+ V+F ELPKTATGK+QK
Sbjct: 478 WGETPCAFIELKPDAPS----ITEEDVISFCRQRLAHFKCPRRVIF-GELPKTATGKIQK 532
Query: 542 YVLGDIANS 550
+ L + + S
Sbjct: 533 FRLREQSGS 541
>gi|395443704|ref|YP_006383957.1| acyl-CoA synthetase [Pseudomonas putida ND6]
gi|388557701|gb|AFK66842.1| acyl-CoA synthetase [Pseudomonas putida ND6]
Length = 540
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 252/550 (45%), Positives = 345/550 (62%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N LTPL FIER A + P++I+ W +TY+RC +LAS+L+ GI
Sbjct: 8 LMPAAVNHVALTPLSFIERTAAVYGNYPAVIHGAIRRNWQETYQRCRRLASALAGRGIGR 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PN P M E HF VPM+GA+ NT+N RLDA I+ +L+H E+K++ D +
Sbjct: 68 GDTVAVMLPNTPTMLEAHFGVPMTGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDREFHA 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ ++L + P LV+ DD E + + D YE +L +GDP+F+W
Sbjct: 128 VIEGALALL----EHPPLVVDVDDPEYGEGRA----VSQLD----YEALLNEGDPEFAWE 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ ++ A+ + + W + + V LWTLPMFH N
Sbjct: 176 WPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAMGHRPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + T+V LR+ D + LIR+H V+H+CGAPIVLN L + PEA + ++
Sbjct: 236 GWCYPWTITALAGTHVFLRRVDPQKILTLIREHKVSHLCGAPIVLNALVNMPEAAKAAIE 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV+ + AG+ PPA V+ E +G V+H YG TE+ G CAW +W+ L ERA +
Sbjct: 296 HPVQAMVAGAAPPAKVIGAVEEMGIKVTHTYGLTEVYGPVTVCAWHDEWDTLSLEERARI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L + + DP+T V RDG T GEI MRG ++M GYLK+PEAT++ + G
Sbjct: 356 KSRQGVRYPTLDGLMVADPQTLQPVPRDGNTLGEIFMRGNTVMKGYLKNPEATAEAFRGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + H DGY+EIKDR KD+IISGGENIS+ E+E LY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVWHADGYIEIKDRLKDIIISGGENISTIEVEDALYKHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+LK G + T E DI +CR + + VPKTVVF ELPKT+TGK+QK
Sbjct: 476 WGETPCAFVALKPGRED----TREADITSWCREHLAGFKVPKTVVF-GELPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL D A ++
Sbjct: 531 YVLRDRAKAL 540
>gi|421619426|ref|ZP_16060380.1| acyl-CoA synthetase [Pseudomonas stutzeri KOS6]
gi|409778457|gb|EKN58156.1| acyl-CoA synthetase [Pseudomonas stutzeri KOS6]
Length = 549
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 253/551 (45%), Positives = 345/551 (62%), Gaps = 19/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N L+PL FIER A+ D P++I+ TW+ TY RC +LAS+L+ GI
Sbjct: 8 LAPAAVNYVALSPLSFIERTASVYPDYPAVIHGSIRRTWADTYTRCRRLASALAGRGIGK 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIP+M E HFAVPM GA+ NT+N RLDA I+ +L+H E++++ D +S
Sbjct: 68 GDTVAVMLPNIPSMLEAHFAVPMIGAVLNTLNVRLDAEAIAFMLQHGEARVLIADREFAS 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ V + P LV+ DD E P +D YE +LA+GDP F+W
Sbjct: 128 VVRAAVGML----DHPPLVIDVDDPEYGEGE-------PVSNLD-YEALLAEGDPAFAWQ 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + LNYT GTT PKGVV ++ ++ A+ + + W + V LWTLPMFH N
Sbjct: 176 WPEDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAMGNHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + +V LR+ D + LIR+H VTH+CGAPIVLN L + P + + +D
Sbjct: 236 GWCYPWTVTALAGVHVFLRRVDPQKILGLIREHQVTHLCGAPIVLNALVNMPASAKAAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV+ + AG+ PPA V+ E +G V+H YG TE+ G CAW +W++ P ERA +
Sbjct: 296 HPVQAMVAGAAPPAKVIGAVEEMGIKVTHVYGLTEVYGPVTICAWHAEWDERPLEERAEI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L + + DP+T RDGQT GEI MRG ++M GYLK+P AT++ + G
Sbjct: 356 KARQGVRYPTLEGLMVADPKTLEPTPRDGQTIGEIFMRGNTVMKGYLKNPSATAEAFEGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + HPDGY+EIKDR KD+IISGGENIS+ E+E VLY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVCHPDGYVEIKDRLKDIIISGGENISTIELEGVLYRHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK + E II +CR + + VP+TVVF + LPKT+TGK+QK
Sbjct: 476 WGETPCAFINLKADHQA----VDEDAIIAFCREHLAAFKVPRTVVF-EVLPKTSTGKIQK 530
Query: 542 YVLGDIANSMS 552
YVL + A +S
Sbjct: 531 YVLRERARDLS 541
>gi|254282584|ref|ZP_04957552.1| AMP-binding protein [gamma proteobacterium NOR51-B]
gi|219678787|gb|EED35136.1| AMP-binding protein [gamma proteobacterium NOR51-B]
Length = 544
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 254/551 (46%), Positives = 350/551 (63%), Gaps = 23/551 (4%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L+ N AN PL+PL F+ R+A D +I++ TW++ Y RC +LA +LSS GI
Sbjct: 11 ELEQNRANYAPLSPLSFLARSAEVYPDKTAIVHQSLRRTWAEVYLRCCRLAGALSSRGIG 70
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G V+++APN+P +E HF VPM+GA+ N IN RLDA T+S ILKH E+K V VD S
Sbjct: 71 GGDTVALMAPNLPETFEAHFGVPMAGAVLNAINVRLDAETVSFILKHGEAKAVLVDREFS 130
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFV--DTYENMLAKGDPQF 180
++ +S + P LV+ DD P + + YE +L++GDP F
Sbjct: 131 EVVQRALSGL---DQKP-LVIDIDD----------PFFEGGELIGEKDYEALLSEGDPNF 176
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+W P+ + + + LNYT GTT PKGVV ++ ++ A+ +L+ W + V LWTLPMF
Sbjct: 177 AWQMPEDEWEAITLNYTSGTTGDPKGVVYHHRGAYLNAISNLVCWDMGHHPVYLWTLPMF 236
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSS--SPEAK 298
H NGW F W A T+VCLR + +F IR+ V H C APIVLNLL++ S
Sbjct: 237 HCNGWCFPWTLAASAGTSVCLRHVRSDHIFDAIRRERVDHFCAAPIVLNLLNNAVSDMKS 296
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
+D V+++TAG+ PPA V+ E +GF V+H YG TE G +V CAW+ W++ A E+
Sbjct: 297 GIDHEVKVMTAGAAPPASVIAGMEQMGFQVTHVYGLTETYGPSVVCAWQDNWDEKSAAEK 356
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A LK+RQGVR + +VDPET V RDG+T GE+VMRG +M GYLK+P+ T+K
Sbjct: 357 ARLKSRQGVRAPMQEGLMVVDPETLEPVPRDGETLGEVVMRGNLVMKGYLKNPDTTAKSF 416
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
G +++GD+ + HPDGY+EIKDRSKD+IISGGENISS E+E VL+ HP V EAAVV
Sbjct: 417 SGGWFHSGDLAVWHPDGYIEIKDRSKDIIISGGENISSIEVEDVLFRHPSVLEAAVVAMQ 476
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
D W E+PCAF++LK+ + TE++II +CR ++ + +PK V+F D LPKT+TGK
Sbjct: 477 DGKWGEVPCAFITLKSDKEE----VTEQNIIDFCRDKLASFKMPKKVIFTD-LPKTSTGK 531
Query: 539 VQKYVLGDIAN 549
+QKYVL +AN
Sbjct: 532 IQKYVLRQLAN 542
>gi|242035977|ref|XP_002465383.1| hypothetical protein SORBIDRAFT_01g037610 [Sorghum bicolor]
gi|241919237|gb|EER92381.1| hypothetical protein SORBIDRAFT_01g037610 [Sorghum bicolor]
Length = 568
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 257/574 (44%), Positives = 356/574 (62%), Gaps = 28/574 (4%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL F+ERAA S+++ YTW+ TY RC +LAS+L+
Sbjct: 7 IDDLPRNDANYTALTPLWFLERAALTHPARASVVHGPVRYTWADTYTRCRRLASALARRS 66
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ G V+VIAPNIPA+YE HF VPM+GA+ N +N RL+A T++ +L+HS +++V VD
Sbjct: 67 VGHGSTVAVIAPNIPAIYEAHFGVPMAGAVVNCVNIRLNAATVAFLLEHSSAEVVMVDQE 126
Query: 121 SSSLLLEVVSLFPPHSK----TPKLVLITDDKEISSSSSPPPRIPPADFVDT-------Y 169
+L + + + K P L++I D P P D Y
Sbjct: 127 FFTLAEDSLRIIADQKKGAFKQPLLIVIGD-----------PTCDPTTLQDALRKGAIEY 175
Query: 170 ENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPK 229
E L GDP+F+W P+ + + L YT GTTS PKGVV ++ +++++ + W + +
Sbjct: 176 EAFLESGDPEFAWKPPQDEWKSIALGYTSGTTSNPKGVVLHHRGAYLMSLSGALIWGMNE 235
Query: 230 QSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN 289
+V LWTLPMFH NGW +TW A + T++CLR+ A +F+ I GVTH CGAP+VLN
Sbjct: 236 GAVYLWTLPMFHCNGWCYTWTLAALCGTSICLRQVSAKAIFSAIANQGVTHFCGAPVVLN 295
Query: 290 LLSSSPEAKQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAW 346
+ ++P A L R V ++TAG+ PP VL LGF ++H YG +E G + CAW
Sbjct: 296 TIVNAPPADTILPLPRVVDVMTAGAAPPPSVLAAMSKLGFRITHTYGLSETYGPSTVCAW 355
Query: 347 KPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLG 406
KP+W+ LPA ERA L ARQGVR +GL +D+VDP+T V DG T GEIVMRG +M G
Sbjct: 356 KPEWDSLPADERARLHARQGVRYVGLEGLDVVDPQTMAPVPADGTTMGEIVMRGNGVMKG 415
Query: 407 YLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSH 466
YLK+P A ++ ++G +++GD+G+ H DGY+E++DR+KD+IISGGENISS E+E +Y H
Sbjct: 416 YLKNPRANAEAFENGWFHSGDLGVRHGDGYVEVRDRAKDIIISGGENISSLEVEKAVYLH 475
Query: 467 PMVNEAAVVGRPDPFWQEIPCAFVSLK-TGTDSGGMMTTEKDIIQYCRARIPRYMVPKTV 525
P V EA+VV R D W E PCAFV+LK D +DI+ +CR R+P Y VPK+V
Sbjct: 476 PAVLEASVVARADEQWGESPCAFVTLKDAAVDRSDEAALARDIMAFCRERLPGYWVPKSV 535
Query: 526 VFIDELPKTATGKVQKYVLGDIANSMS-MSHSRM 558
VF LPKTATGK++K+ L A + + SRM
Sbjct: 536 VF-GPLPKTATGKIKKHELRAKAKELGPVRKSRM 568
>gi|346642882|ref|YP_259269.2| acyl-CoA synthetase [Pseudomonas protegens Pf-5]
gi|341580027|gb|AAY91436.2| AMP-binding domain protein [Pseudomonas protegens Pf-5]
Length = 540
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 251/550 (45%), Positives = 339/550 (61%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N L+PL FIER A D P++I+ TW+QTY RC +LAS+L+ GI
Sbjct: 8 LAPTAVNHIALSPLSFIERTAAVYPDYPAVIHGSIRRTWAQTYSRCRRLASALAGRGIGK 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V+V+ PNIPAM E HF VPM GA+ N +N RLDA I+ +L H E+K++ D
Sbjct: 68 NDTVAVMLPNIPAMLEAHFGVPMIGAVLNALNVRLDAEAIAFMLAHGEAKVLIADREFHE 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ V++ P LV+ DD E P +D YE LA+GDP+F+W
Sbjct: 128 VIHAAVAML----DHPPLVIDLDDPEYGEGQ------PVSDL--DYEAFLAEGDPEFAWQ 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ ++ A+ + + W + V LWTLPMFH N
Sbjct: 176 WPDDEWQAIALNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAMGNHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + +V LR+ D + LIR+H VTH+CGAPIVLN L + P+ + +D
Sbjct: 236 GWCYPWTVTALAGVHVFLRRVDPQKILDLIREHQVTHLCGAPIVLNALVNMPDTAKAAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA V+ E +G V+H YG TE+ G CAW W++LP +RA +
Sbjct: 296 HPVNAMVAGAAPPAKVIGAVEEMGIKVTHVYGLTEVYGPVTLCAWHAAWDELPLEQRAQI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L V + DP+T RDGQT GEI MRG ++M GYLK+P AT++ + G
Sbjct: 356 KSRQGVRYPTLEGVMVADPKTLEPTPRDGQTIGEIFMRGNTVMKGYLKNPTATAEAFEGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G+ HPDGY+EI+DR KD+IISGGENIS+ E+E VLY HP V EAAVV RPD
Sbjct: 416 WFHTGDLGVTHPDGYVEIRDRLKDIIISGGENISTIELEGVLYRHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK E +II +CR + + VP+TVVF LPKT+TGK+QK
Sbjct: 476 WGETPCAFITLKADHQD----VREAEIIAFCREHLAGFKVPRTVVF-SPLPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
+VL D+A ++
Sbjct: 531 FVLRDMAKNL 540
>gi|226944611|ref|YP_002799684.1| acyl-CoA synthetase [Azotobacter vinelandii DJ]
gi|226719538|gb|ACO78709.1| acyl-activating enzyme [Azotobacter vinelandii DJ]
Length = 540
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 250/550 (45%), Positives = 345/550 (62%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L + N PL+PL FIER+A + P++I+ TW++TY RC +LAS+L+ GI
Sbjct: 8 LSRSEVNHIPLSPLSFIERSAAVHPNRPAVIHGSIRRTWAETYTRCRRLASALAGRGIGK 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIP M E HF VPM GA+ NT+N RLDA I+ +L+H E+K++ D
Sbjct: 68 GDTVAVMLPNIPQMLEAHFGVPMIGAVLNTLNVRLDAEAIAFMLQHGEAKVLIADREYQE 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + P L++ DD E +P +D YE +LA+GDP F+W
Sbjct: 128 VIHAAIGML----DHPPLLIDVDDPEYGEG------LPISDL--EYEALLAEGDPAFAWQ 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ ++ A+ + + W + V LWTLPMFH N
Sbjct: 176 WPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMVWAMGNHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + +V LR+ D + LI +H VTH+CGAPIVLN L + P++ + +D
Sbjct: 236 GWCYPWTVTALAGAHVFLRRVDPQKILTLIHEHRVTHLCGAPIVLNALVNMPDSAKAAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA V+ E +G V+H YG TE+ G CAW +W++LP ERA +
Sbjct: 296 HPVHAMVAGAAPPAKVIGAVEEMGIKVTHVYGLTEVYGPVTVCAWHEEWDELPLDERARI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L V + DP+T V RDG T GEI MRG ++M GYLK+P AT++ + G
Sbjct: 356 KARQGVRYPTLEGVMVADPQTLEPVPRDGDTIGEIFMRGNTVMKGYLKNPSATAEAFEGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + HPDGY+EIKDR KD++ISGGENIS+ E+E VLY H V EAAVV RPD
Sbjct: 416 WFHTGDLAVWHPDGYVEIKDRLKDIVISGGENISTIEVEGVLYRHHGVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+LK G + T+E +II +CR + + +P+ VVF ELPKT+TGK+QK
Sbjct: 476 WGETPCAFVTLKAGHER----TSEAEIIAFCREHLAGFKIPRRVVF-SELPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL D A ++
Sbjct: 531 YVLRDRARAL 540
>gi|146308832|ref|YP_001189297.1| acyl-CoA synthetase [Pseudomonas mendocina ymp]
gi|145577033|gb|ABP86565.1| AMP-dependent synthetase and ligase [Pseudomonas mendocina ymp]
Length = 539
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 252/544 (46%), Positives = 344/544 (63%), Gaps = 20/544 (3%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
N L+PL FIER A P++++ W++TY RC +LAS+L+ GI G V+V
Sbjct: 14 NHVALSPLSFIERTAAVYPHYPAVVHGSIRRNWAETYARCRRLASALAGRGIGQGDTVAV 73
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+ PNIPAM E HF VPM GA+ NT+N RLDA I+ +L+H E+K+V D ++ +
Sbjct: 74 MLPNIPAMLEAHFGVPMIGAVLNTLNVRLDAEAIAFMLQHGEAKVVIADREFFDVIHAAI 133
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDL 189
+ P LV+ DD E + + D YE LA+GDP+F+W P +
Sbjct: 134 GML----DHPPLVIDVDDPEYGEGQA----VSELD----YEAFLAEGDPEFAWQWPTDEW 181
Query: 190 DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249
+ LNYT GTT PKGVV ++ F+ A+ + + W + V LWTLPMFH NGW + W
Sbjct: 182 QAISLNYTSGTTGNPKGVVYHHRGAFLNAMGNQMTWNMGNHPVYLWTLPMFHCNGWCYPW 241
Query: 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP-EAKQ-LDRPVRIL 307
+ +V LR+ D + LIR VTH+CGAPIVLN L + P EAK +D PV+ +
Sbjct: 242 TITALAGVHVFLRRVDPAKILTLIRDEQVTHLCGAPIVLNALVNMPAEAKAAIDHPVKAM 301
Query: 308 TAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AG+ PPA V+ E +G V+H YG TE+ G CAW +W++LP +RA++KARQGV
Sbjct: 302 VAGAAPPAKVIGAVEEMGIHVTHVYGLTEVYGPVTLCAWHAEWDELPLEQRATIKARQGV 361
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGD 427
R L V + DP+T V RDGQT GEI MRG ++M GYLK+P AT++ + G ++TGD
Sbjct: 362 RYPTLEGVMVADPKTLEPVPRDGQTIGEIFMRGNTVMKGYLKNPSATAEAFEGGWFHTGD 421
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+G+ H DGY+EI+DR KD+IISGGENIS+ E+E VLY HP V EAAVV RPD W E PC
Sbjct: 422 LGVCHADGYVEIRDRLKDIIISGGENISTIEVEGVLYRHPAVLEAAVVARPDEKWGETPC 481
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDI 547
AF++LKTG + +E +I+ +CR + + VPKTVVF +LPKT+TGK+QK+VL D+
Sbjct: 482 AFITLKTGQQA-----SETEIMTFCREHLAGFKVPKTVVFT-QLPKTSTGKIQKFVLRDM 535
Query: 548 ANSM 551
A ++
Sbjct: 536 AKAL 539
>gi|398811475|ref|ZP_10570273.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Variovorax
sp. CF313]
gi|398080560|gb|EJL71367.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Variovorax
sp. CF313]
Length = 555
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 255/553 (46%), Positives = 346/553 (62%), Gaps = 23/553 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PL+PL F++RAA D +I++ + +W+QT RC +LAS+LS GI
Sbjct: 10 LDRTAANFVPLSPLRFLDRAADVYPDRTAIVHGELRRSWAQTRERCYRLASALSKRGIRR 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
VS++APN PAM E HF VP+SGA+ N IN+RLD ++ IL+HSES+L+ VD +
Sbjct: 70 ADTVSIMAPNTPAMLEAHFGVPLSGAVLNAINSRLDVEGLAFILRHSESRLLLVDREFGA 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQFS 181
L + V+L P LV I D + P + V YE +L++GDP F
Sbjct: 130 LAKQAVALL---DNPPFLVDINDHEA-----------PDGEAVGDLDYETLLSEGDPDFD 175
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
V P + +P+ LNYT GTT PKGVV ++ +++++ L DW VPK V LWTLPMFH
Sbjct: 176 GVWPTDECEPIALNYTSGTTGDPKGVVPSHRGTYLMSLLQLTDWAVPKAPVYLWTLPMFH 235
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD 301
NGW FTW T+VC+RK A ++ + H H C AP V+ LL ++ + ++
Sbjct: 236 ANGWCFTWAITAAAGTHVCMRKVTAAGIYKALADHKADHFCAAPTVMGLLVNARDEERRP 295
Query: 302 RP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
P VR+LTAGSPPPA VL +GF V H YG TE++G VSCAW+P W+ L A ER
Sbjct: 296 LPGRVRVLTAGSPPPAAVLEAAAVMGFDVDHVYGITEVSGTPVSCAWQPAWDGLSAAERG 355
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L+ARQGVR L + +VDPET V DG T GE+V+RG ++M GYLK+ +T K +
Sbjct: 356 RLQARQGVRAAALEGLQVVDPETMRPVPFDGTTAGELVIRGNTVMKGYLKNTASTQKAFE 415
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G + TGD+ ++H DGY++I DRSKDVIISGGENISS E+E +L+ HP + AAVV +PD
Sbjct: 416 GGWFRTGDIAVVHADGYVQITDRSKDVIISGGENISSVEVEDILHRHPSILYAAVVAQPD 475
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+PCAF+ LK +S G+ E ++I +CR R+ + P+ VVF LPKTATGK+
Sbjct: 476 EKWGEVPCAFIELK--PESLGLQ--ESEVIAFCRERLAHFKCPRKVVFT-ALPKTATGKI 530
Query: 540 QKYVLGDIANSMS 552
QK+ L ++A S S
Sbjct: 531 QKFRLRELAGSQS 543
>gi|330505036|ref|YP_004381905.1| acyl-CoA synthetase [Pseudomonas mendocina NK-01]
gi|328919322|gb|AEB60153.1| acyl-CoA synthetase [Pseudomonas mendocina NK-01]
Length = 539
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 252/544 (46%), Positives = 344/544 (63%), Gaps = 20/544 (3%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
N L+PL FIER A P++++ W++TY RC +LAS+L+ GI G V+V
Sbjct: 14 NHVALSPLSFIERTAAVYPHYPAVVHGSIRRNWAETYARCRRLASALAGRGIGQGDTVAV 73
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+ PNIPAM E HF VPM GA+ NT+N RLDA I+ +L+H E+K+V D ++ +
Sbjct: 74 MLPNIPAMLEAHFGVPMIGAVLNTLNVRLDAEAIAFMLQHGEAKVVIADREFFDVIHAAI 133
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDL 189
+ P LV+ DD E + + D YE LA+GDP+F+W P +
Sbjct: 134 GML----DHPPLVIDVDDPEYGEGQA----VSDLD----YEAFLAEGDPEFAWQWPTDEW 181
Query: 190 DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249
+ LNYT GTT PKGVV ++ F+ A+ + + W + V LWTLPMFH NGW + W
Sbjct: 182 QAISLNYTSGTTGNPKGVVYHHRGAFLNAMGNQMTWNMGNHPVYLWTLPMFHCNGWCYPW 241
Query: 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP-EAKQ-LDRPVRIL 307
+ +V LR+ D + LIR VTH+CGAPIVLN L + P EAK +D PV+ +
Sbjct: 242 TITALAGVHVFLRRVDPAKILTLIRDEQVTHLCGAPIVLNALVNMPAEAKAAIDHPVKAM 301
Query: 308 TAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AG+ PPA V+ E +G V+H YG TE+ G CAW +W++LP ERA++KARQGV
Sbjct: 302 VAGAAPPAKVIGAVEEMGIAVTHVYGLTEVYGPVTLCAWHAEWDELPLEERATIKARQGV 361
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGD 427
R L V + DP+T V RDGQT GEI MRG ++M GYLK+P AT++ + G ++TGD
Sbjct: 362 RYPTLEGVMVADPKTLEPVPRDGQTIGEIFMRGNTVMKGYLKNPSATAEAFEGGWFHTGD 421
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+G+ H DGY+EI+DR KD+IISGGENIS+ E+E VLY HP V EAAVV RPD W E PC
Sbjct: 422 LGVCHADGYVEIRDRLKDIIISGGENISTIEVEGVLYRHPAVLEAAVVARPDEKWGETPC 481
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDI 547
AF++LKTG + ++ +I+ +CR + + VPKTVVF +LPKT+TGK+QK+VL D+
Sbjct: 482 AFITLKTGQQA-----SDSEIMTFCREHLAGFKVPKTVVFT-QLPKTSTGKIQKFVLRDM 535
Query: 548 ANSM 551
A ++
Sbjct: 536 AKAL 539
>gi|418530411|ref|ZP_13096334.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni ATCC
11996]
gi|371452130|gb|EHN65159.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni ATCC
11996]
Length = 548
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 260/551 (47%), Positives = 341/551 (61%), Gaps = 17/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PN AN LTPLGFI R A + +I++ D +W+QTY RC QLASSL GI
Sbjct: 9 LAPNTANHAALTPLGFIARTAEVYPERLAIVHGDLRQSWAQTYARCRQLASSLQKIGIGK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V+V+ PN P M E HF VPM+GA+ NT+NTRLDA T++ +L H E+K + VD ++
Sbjct: 69 NDTVAVMLPNTPPMVEAHFGVPMAGAVLNTLNTRLDAETLAFMLDHGEAKALIVDPEFAA 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L+ + L P V+ +D ++ I YE+ +A+GD F W
Sbjct: 129 LMARALKL--RKGTEPIHVIQVEDSVYGEAAEQIGVI-------DYESFVAQGDAGFDWQ 179
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ A+ ++++W +PK +V LWTLPMFH N
Sbjct: 180 WPGDEWDAIALNYTSGTTGNPKGVVYHHRGAHNNAISNVLEWDMPKHAVYLWTLPMFHCN 239
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW F W A A NVCLR+ DA VF IR HGVTH CGAPIV +LL ++P A + P
Sbjct: 240 GWCFPWTVAARAAVNVCLRRVDAQAVFDAIRNHGVTHYCGAPIVHSLLVNAPAAMKQGVP 299
Query: 304 --VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ + AG+ PPA ++ E++GF ++H YG TE G CA WN L ERA L
Sbjct: 300 AGVKAMVAGAAPPASMIEGMEAMGFDITHVYGLTETYGPATVCAKHESWNALDIGERARL 359
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
+RQGVR ++DPET V RDGQT GEI+ +G M GYLK+P+AT + + G
Sbjct: 360 NSRQGVRYHLQRSAAVLDPETMQPVPRDGQTMGEIMFQGNIAMKGYLKNPQATQEAFRGG 419
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+ + HPDGY++IKDRSKD+IISGGENISS E+E VLY HP V AAVV +PDP
Sbjct: 420 WFHSGDLAVQHPDGYIQIKDRSKDIIISGGENISSIEVEDVLYRHPAVLAAAVVAKPDPK 479
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF+ LK G + TTE+DII +C+ + Y VP+ VVF ELPKT+TGK+QK
Sbjct: 480 WGETPCAFIELKAGAE-----TTEQDIIAHCKKHLAGYKVPRAVVF-GELPKTSTGKIQK 533
Query: 542 YVLGDIANSMS 552
+ L A S S
Sbjct: 534 FELRKQAGSAS 544
>gi|115360767|ref|YP_777904.1| AMP-dependent synthetase/ligase [Burkholderia ambifaria AMMD]
gi|115286095|gb|ABI91570.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria AMMD]
Length = 550
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 252/551 (45%), Positives = 346/551 (62%), Gaps = 19/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ N AN PLTPL F++R A + +II+ D TW++T RC + AS+L GI P
Sbjct: 10 LEKNAANHVPLTPLTFLDRTADVFPNRTAIIHGDFRQTWAKTRERCYRFASALVRLGIEP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS+IAPN PAM E HF VP+SGA+ N IN RLDA I+ IL+H E KL+ VD +
Sbjct: 70 GDTVSIIAPNTPAMLEAHFGVPLSGAVLNAINCRLDADGIAFILRHGECKLLLVDRELAP 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L+ + + P P+++ I D + P I D YE++LA GDP+F+
Sbjct: 130 LVAKALQSVP---HPPRVIDINDHEAPDG-----PAIGETD----YESLLASGDPEFAGR 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
RP + P+ LNYT GTT PKGVV +++ +++++ + +W +P+ + LWTLPMFH N
Sbjct: 178 RPADEWTPIALNYTSGTTGDPKGVVPSHRSTYVMSLLQMTNWPLPRAPIYLWTLPMFHAN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLD 301
GW FTW T+VCLRK +A + + I KHGV H C APIVL ++S P E + L
Sbjct: 238 GWCFTWAITSAAGTHVCLRKVNAANILSAIAKHGVDHFCAAPIVLAGIASVPPSELQPLP 297
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R VR+LTAGSP PA VL ++GF V H YG TEIAG +SCAW +W+ LP+ ++ +
Sbjct: 298 RRVRVLTAGSPAPAAVLEAVGAVGFDVDHVYGITEIAGTPISCAWHDEWDTLPSDQQGKM 357
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR + + D T V D + GE+++RG ++M+GY K+ +AT+K G
Sbjct: 358 KARQGVRAAAFENMSVADLATLEPVPADSTSCGEVLVRGNTVMMGYFKNADATAKAFAGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ ++HPDGY++I DRSKDVIISGGENISS E+E V+Y V AAVV +PD
Sbjct: 418 WFHTGDLAVVHPDGYIQITDRSKDVIISGGENISSVEVEEVIYRMAGVLNAAVVAQPDDK 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF+ LK TE+D+I +CR R+ + P+ V+F ELPKTATGK+QK
Sbjct: 478 WGETPCAFIELKPDASP----ITEQDVILFCRERLAHFKCPRRVIF-GELPKTATGKIQK 532
Query: 542 YVLGDIANSMS 552
+ L + A S +
Sbjct: 533 FRLREQAGSQA 543
>gi|26990265|ref|NP_745690.1| acyl-CoA synthetase [Pseudomonas putida KT2440]
gi|24985214|gb|AAN69154.1|AE016549_3 AMP-binding domain protein [Pseudomonas putida KT2440]
Length = 540
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 251/550 (45%), Positives = 344/550 (62%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N LTPL FIER A + P++I+ W +TY+RC +LAS+L+ GI
Sbjct: 8 LMPAAVNHVALTPLSFIERTAAVYGNYPAVIHGAIRRNWQETYQRCRRLASALAGRGIGR 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PN P M E HF VPM+GA+ NT+N RLDA I+ +L+H E+K++ D +
Sbjct: 68 GDTVAVMLPNTPTMLEAHFGVPMTGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDREFHA 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ ++L + P LV+ DD E + + D YE +L +GDP+F+W
Sbjct: 128 VIEGALALL----EHPPLVVDVDDPEYGEGRA----VSQLD----YEALLNEGDPEFAWE 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ ++ A+ + + W + + V LWTLPMFH N
Sbjct: 176 WPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAMGHRPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + T+V LR+ D + LIR+H V+H+CGAPIVLN L + PEA + ++
Sbjct: 236 GWCYPWTITALAGTHVFLRRVDPQKILTLIREHKVSHLCGAPIVLNALVNMPEAAKAAIE 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV+ + AG+ PPA V+ E +G V+H YG TE+ G CAW +W+ L ERA +
Sbjct: 296 HPVQAMVAGAAPPAKVIGAVEQMGIKVTHTYGLTEVYGPVTVCAWHDEWDALSLEERARI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L + + DP+T V RDG T GEI MRG ++M GYLK+PEAT++ + G
Sbjct: 356 KSRQGVRYPTLDGLMVADPQTLQPVPRDGDTLGEIFMRGNTVMKGYLKNPEATAEAFRGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + H DGY+EIKDR KD+IISGGENIS+ E+E LY H V EAAVV RPD
Sbjct: 416 WFHTGDLAVWHADGYIEIKDRLKDIIISGGENISTIEVEDALYKHSAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+LK G + T E DI +CR + + VPKTVVF ELPKT+TGK+QK
Sbjct: 476 WGETPCAFVALKPGRED----TREADITSWCREHLAGFKVPKTVVF-GELPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL D A ++
Sbjct: 531 YVLRDRAKAL 540
>gi|330826137|ref|YP_004389440.1| o-succinylbenzoate--CoA ligase [Alicycliphilus denitrificans K601]
gi|329311509|gb|AEB85924.1| o-succinylbenzoate--CoA ligase [Alicycliphilus denitrificans K601]
Length = 548
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 258/551 (46%), Positives = 340/551 (61%), Gaps = 17/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PL+PL FIER A D +I++ TW QTY RC +LASSL + GI
Sbjct: 9 LPRNEANHAPLSPLSFIERTAEVYPDRLAIVHGGLRQTWGQTYARCRRLASSLRAAGIGK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V+V+ PN P M E HF VPM+GA+ N +NTRLD TI+ +L H E++ V VD +
Sbjct: 69 NDTVAVMLPNTPPMVEAHFGVPMAGAVLNALNTRLDPETIAFMLDHGEARAVIVDPEFAP 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ ++L SK P L++ +D +++ R+ TYE LA GDPQF+W
Sbjct: 129 VMARALALR--QSKAPLLLIDVEDAVYGAAAE---RLG----TQTYEEFLAAGDPQFAWE 179
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ I A+ ++++W +PK SV LWTLPMFH N
Sbjct: 180 LPGDEWDAIALNYTSGTTGNPKGVVYHHRGAAINAISNVLEWDMPKHSVYLWTLPMFHCN 239
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW F W A NVCLR+ +A +F +R HGVTH CGAPIV LL ++P A + P
Sbjct: 240 GWCFPWTVAARAGVNVCLRRVEAQAIFDAMRSHGVTHYCGAPIVHGLLVNAPAAMKEGVP 299
Query: 304 --VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ + AG+ PPA ++ E LGF ++H YG TE+ G CA WN L ERA L
Sbjct: 300 AGVKAMVAGAAPPASMIEGMEKLGFDLTHVYGLTEVYGPATVCAKHDAWNALDVGERARL 359
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGVR ++DPET V RDG+T GEI+ RG M GYLK+P AT + G
Sbjct: 360 NARQGVRYHLQRAAAVLDPETMQPVPRDGETMGEIMFRGNIAMKGYLKNPAATGDAFRGG 419
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+ + +PDGY++IKDRSKD+IISGGENISS E+E VLY HP V AAVV +PDP
Sbjct: 420 WFHSGDLAVQYPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPDVLAAAVVAKPDPK 479
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK G + T +DI+ +C+ + + VP+ VVF ELPKT+TGK+QK
Sbjct: 480 WGETPCAFVELKAGAQA-----TPEDIVAHCKKHLAGFKVPRAVVF-GELPKTSTGKIQK 533
Query: 542 YVLGDIANSMS 552
+ L A S +
Sbjct: 534 FELRRQAGSAA 544
>gi|402701949|ref|ZP_10849928.1| acyl-CoA synthetase [Pseudomonas fragi A22]
Length = 540
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 248/550 (45%), Positives = 346/550 (62%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+PN N L+PL FIER A+ D P++I+ TW QTY+RC +LAS+L++ GI
Sbjct: 8 LEPNAVNHIALSPLSFIERTASVYPDYPAVIHGSIRRTWLQTYQRCRRLASALAARGIGK 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM E HFAVPM GA+ N +N RLDA I+ +L H E++++ D +
Sbjct: 68 GDTVAVMLPNIPAMLEAHFAVPMLGAVLNALNVRLDAEAIAFMLAHGEARVLIADREFHA 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ V++ P L++ DD + P +D YE +L +GDP + W
Sbjct: 128 VIHAAVAML----DHPPLIIDVDDPQYGEGQ-------PVSTLD-YEALLTEGDPDYPWQ 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ ++ ++ + + W + V LWTLPMFH N
Sbjct: 176 WPADEWQAIALNYTSGTTGNPKGVVYHHRGAYLNSLGNQMVWAIGNHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + +V LR+ D + +LI++H VTHMCGAPIVLN L++ P + + +D
Sbjct: 236 GWCYPWIITALAGVHVFLRRVDPQRILSLIQEHQVTHMCGAPIVLNALTNLPLSARVAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV ++ AG+ PPA V+ E +G V+H YG TE+ G CAW +W+ P ERA +
Sbjct: 296 HPVSVMVAGAAPPAQVIGAVEEMGIKVTHVYGLTEVYGPVTICAWHEQWDARPLAERAQI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L V + DP+T + RDG+T GEI MRG ++M GYLK+P AT++ + G
Sbjct: 356 KSRQGVRYPTLEGVMVADPKTLVPTPRDGETMGEIFMRGNTVMKGYLKNPSATAQAFEGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + HPDGY+EI+DR KD+IISGGENIS+ E+E VLY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVCHPDGYMEIRDRLKDIIISGGENISTIEVEGVLYRHPGVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK E DII +CR + + VP+TVVF LPKT+TGKVQK
Sbjct: 476 WGETPCAFITLKDDHQQ----VLELDIIAFCRQHLAGFKVPRTVVFT-LLPKTSTGKVQK 530
Query: 542 YVLGDIANSM 551
Y+L D+A ++
Sbjct: 531 YLLRDMAKAL 540
>gi|375262558|ref|YP_005024788.1| acyl-CoA synthetase [Vibrio sp. EJY3]
gi|369842986|gb|AEX23814.1| acyl-CoA synthetase [Vibrio sp. EJY3]
Length = 539
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 248/552 (44%), Positives = 346/552 (62%), Gaps = 20/552 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L P N LTPL F+ER AT + P++I+ WS+TY+RC QLAS+LS GI
Sbjct: 6 NDLTPCAVNHIALTPLSFLERTATVYPEYPAVIHGSIRRNWSETYQRCRQLASALSGRGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
G VSV+ PNIPAM E HF VPM GA+ NT+N RLDA TI+ +LKHSE+K++ D
Sbjct: 66 GKGDTVSVMLPNIPAMLEAHFGVPMIGAVLNTLNVRLDAETIAFMLKHSEAKVLVCDREF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
+++ E ++L P L++ +D E + +D YE LA+GDP +
Sbjct: 126 HAVITEALTLI----DNPPLIIDVNDPEYGGEEAT------SDL--DYEAFLAEGDPNYE 173
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P+ + + LNYT GTT PKGVV ++ ++ ++ + + W + V LWTLPMFH
Sbjct: 174 WQWPEDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNQMTWSMGHHPVYLWTLPMFH 233
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW + W + +V LR+ D V LIR+H V+H+CGAPIVLN L + PE +
Sbjct: 234 CNGWCYPWTITALAGVHVFLRRVDPQKVLTLIREHKVSHLCGAPIVLNALVNMPEEAKAA 293
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+D PV + AG+ PPA V+ E +G ++H YG TE+ G CAW W++ ERA
Sbjct: 294 IDHPVNAMVAGAAPPAKVIGDVEKMGINITHVYGLTEVYGPVTVCAWHESWDEFSLEERA 353
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+LK+RQGVR L V + D +T V +DG+T GE+ MRG ++M GYLK+P AT++ +
Sbjct: 354 TLKSRQGVRYPTLEGVMVADTQTLKPVAKDGKTIGEVFMRGNTVMKGYLKNPSATAEAFE 413
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+G+ HP+GY+EIKDR KD+IISGGENIS+ E+E VLY HP + E +VV +PD
Sbjct: 414 GGWFHTGDLGVCHPNGYIEIKDRLKDIIISGGENISTIELEDVLYKHPDILEVSVVAKPD 473
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E PCAF++LK T+E +I+ YCR + + +PKT+VF + LPKT+TGKV
Sbjct: 474 ERWGESPCAFITLKQNR-----FTSENEILDYCREHLAGFKIPKTIVFTN-LPKTSTGKV 527
Query: 540 QKYVLGDIANSM 551
QKY+L D A +
Sbjct: 528 QKYILRDWAKEI 539
>gi|311108374|ref|YP_003981227.1| AMP-binding protein [Achromobacter xylosoxidans A8]
gi|310763063|gb|ADP18512.1| AMP-binding enzyme family protein 24 [Achromobacter xylosoxidans
A8]
Length = 545
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 250/549 (45%), Positives = 353/549 (64%), Gaps = 23/549 (4%)
Query: 7 NPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHV 66
N AN LTPL FIERAA + +I++ +W QTY RC QLAS L+ G+ PG
Sbjct: 16 NSANHLALTPLTFIERAAKVYPERTAIVHGALRQSWRQTYARCRQLASGLARLGVRPGDT 75
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V+V+APNIPA+YE HF V M+GA+ N +NTRLDA T++ IL+H + ++ D + ++
Sbjct: 76 VAVMAPNIPALYEAHFGVAMAGAVLNALNTRLDAETLAFILEHGAATVLLTDREYAPVMA 135
Query: 127 EVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD--TYENMLAKGDPQFSWVR 184
+ ++ S+ P V+ DD E P + + +YE +LA GD Q +
Sbjct: 136 QALA----KSRRPIRVVDIDDPEYGG---------PGELIGEMSYEALLASGDAQAGFPW 182
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
P + + LNYT GTT +PKGV+ ++ ++ A+ + + + + +V LWTLPMFH NG
Sbjct: 183 PADEWQSLCLNYTSGTTGSPKGVLYHHRGAYLNAMGNALACDMRQHAVYLWTLPMFHCNG 242
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLDR 302
WSF W A++ TNVCLR+ +A VF I+ HGV + C AP+VL +L +SP ++ R
Sbjct: 243 WSFPWTIALLAGTNVCLRRVEAGAVFDAIQAHGVDYFCAAPVVLGMLINSPPEIKRRASR 302
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
PV++LT GSPPPA V+ + LG V+H YG TE G ++SCAW W+ LP E+A+LK
Sbjct: 303 PVQVLTGGSPPPAAVIAAMDELGIDVTHLYGLTESYGPSISCAWHEAWSDLPLEEQAALK 362
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
AR GVR + +V ++DP T V DG T GEI+MRG +LM GYLK+P+AT++ G
Sbjct: 363 ARIGVRKHTMEQVRVLDPATLDPVPPDGVTVGEIMMRGNTLMKGYLKNPQATAEAFAGGW 422
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
++TGD+ ++HPDGY++IKDR+KD++ISGGENIS+ E+E VLY+HP V EAAVV RPD W
Sbjct: 423 FHTGDLAVVHPDGYMQIKDRAKDIVISGGENISTVEVEDVLYAHPAVLEAAVVARPDAKW 482
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E PCAFV+LK G + + ++ +CR R+ + VP+T VF LPKTATGK+QKY
Sbjct: 483 GETPCAFVTLKDGCAA-----SADELTGFCRTRLAGFKVPRTFVF-GPLPKTATGKIQKY 536
Query: 543 VLGDIANSM 551
+L + A +
Sbjct: 537 LLREQARQL 545
>gi|423094996|ref|ZP_17082792.1| AMP-binding domain protein [Pseudomonas fluorescens Q2-87]
gi|397887202|gb|EJL03685.1| AMP-binding domain protein [Pseudomonas fluorescens Q2-87]
Length = 540
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/550 (46%), Positives = 341/550 (62%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P+ N L+PL FIER A+ P++I+ W QTY RC +LA +LS GI
Sbjct: 8 LAPSAVNHMALSPLSFIERTASVYGQYPAVIHGSIRRNWQQTYERCRRLADALSGRGIGK 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM E HF VPM GA+ NT+N RLDA+ I+ +L+H E+K++ D
Sbjct: 68 GDTVAVMLPNIPAMLEAHFGVPMIGAVLNTLNVRLDAQAIAFMLEHGEAKVLIADREFHG 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ E +SL P LV+ DD E + I P D YE L +GDP F+W
Sbjct: 128 VVQEALSLL----SKPPLVVDVDDPEFGEGRA----ISPLD----YEAFLEEGDPAFAWP 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ ++ A+ + + W + V LWTLPMFH N
Sbjct: 176 WPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAMGNHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + T+V LR+ D + LI +H V+H+CGAPIVLN L + P+A + +D
Sbjct: 236 GWCYPWTVTALAGTHVFLRRVDPQKILTLIGEHRVSHLCGAPIVLNALVNLPDASRVTID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA V+ E++G ++H YG TE+ G CAW +W++ ERA +
Sbjct: 296 HPVSAMVAGAAPPAKVIEAVEAMGIKITHVYGLTEVYGPVTVCAWHAQWDERSVDERARI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L + + DP+T V DG GEI MRG ++M GYLK+P+AT + K G
Sbjct: 356 KSRQGVRYPTLEGLMVADPQTLQPVACDGTRIGEIFMRGNTVMKGYLKNPQATQEAFKGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + HPDGY+EIKDR KD+IISGGENIS+ E+E+VLY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVRHPDGYVEIKDRLKDIIISGGENISTIEVENVLYRHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK G E DII +CR + + +PKTVVF ELPKT+TGK+QK
Sbjct: 476 WGETPCAFITLKPGHQD----ILEADIILFCREHLAGFKLPKTVVF-SELPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL D A ++
Sbjct: 531 YVLRDWAKAL 540
>gi|407715530|ref|YP_006836810.1| AMP-dependent synthetase and ligase [Cycloclasticus sp. P1]
gi|407255866|gb|AFT66307.1| AMP-dependent synthetase and ligase [Cycloclasticus sp. P1]
Length = 541
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/550 (44%), Positives = 356/550 (64%), Gaps = 20/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN L+PL F++RAA + + I+ + TW++TY RC++LAS+L+S G+
Sbjct: 8 LDKNPANYVSLSPLTFLKRAADVYPNKIACIHGEQKITWAETYLRCVKLASALASRGVKK 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS + PNIPAM+ELHFAVPM GA+ ++INTRLD ++++ L H+ESK VF+D +
Sbjct: 68 GDTVSTMLPNIPAMFELHFAVPMLGAVLHSINTRLDVKSVAFQLDHAESKAVFID----A 123
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+V++ ++ LV+ +D S + I + YE ++A+G+ F W
Sbjct: 124 EFADVMATAVKEAEVSPLVIDVEDATFGSRQA----IGEVE----YEMLVAEGNETFQWS 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + LNYT GTT PKGVV ++ ++ A+++++ W + + LWTLPMFH N
Sbjct: 176 LPEDEWQSITLNYTSGTTGNPKGVVYHHRGAYLNALNNIVTWDMGNHPIYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W A TNVCLR T+F LI+ + H CGAP VL +L ++PE Q ++
Sbjct: 236 GWCFPWSLAASAGTNVCLRSVLPKTIFKLIKSEKIDHFCGAPTVLTMLINTPEKHQQGIE 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+++TAG+ PPA V+ + E + F V+H YG TE G CAW +W++LP+ E+A+L
Sbjct: 296 HEVKVMTAGAAPPAAVIQKMEEMSFSVTHVYGLTETYGPCTVCAWHDEWDELPSDEQAAL 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
+ARQGVR+ L ++ + DPET + +DG + GE+ MRG ++M GYLK+P A+ + K G
Sbjct: 356 RARQGVRSAMLEDLMVADPETLEPMPKDGVSMGEVFMRGNNVMKGYLKNPSASDEAFKGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+ + H DGY++IKDRSKD+IISGGENIS+ E+ESVLY HP + EAAVV + D
Sbjct: 416 WFHSGDLAVWHEDGYIDIKDRSKDIIISGGENISTLEVESVLYRHPAILEAAVVAKYDDV 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+LK G ++ TEK+II +CR + Y PK VVF LPKT+TGK+QK
Sbjct: 476 WGEKPCAFVTLKEGENA-----TEKEIISFCRKNLAHYKAPKYVVF-GGLPKTSTGKIQK 529
Query: 542 YVLGDIANSM 551
+ L + AN +
Sbjct: 530 FTLREQANEI 539
>gi|398845829|ref|ZP_10602843.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM84]
gi|398253179|gb|EJN38322.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM84]
Length = 540
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 252/550 (45%), Positives = 345/550 (62%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N LTPL FIER A + P++I+ W +TY+RC +LAS+L+ G+
Sbjct: 8 LMPAAVNHVALTPLSFIERTAAVYGNYPAVIHGAIRRDWRETYQRCRRLASALAGRGVGR 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM E HF VPM GA+ NT+N RLDA I+ +L H E+K++ D +
Sbjct: 68 GDTVAVMLPNIPAMLEAHFGVPMIGAVLNTLNVRLDAEAIAFMLHHGEAKVLITDREFHT 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ ++L + P LV+ DD E + + D YE +LA+GDP+F+W
Sbjct: 128 VIEAALALL----EHPPLVVDVDDPEYGEGRA----VSDLD----YEALLAEGDPEFAWE 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ ++ A+ + + W + + V LWTLPMFH N
Sbjct: 176 WPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNAIGNQMTWGMGHRPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + T+V LR+ D + LIR+H V+H+CGAPIVLN L + PEA + ++
Sbjct: 236 GWCYPWTITALAGTHVFLRRVDPQKILTLIREHRVSHLCGAPIVLNALVNMPEAAKAAIE 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV+ + AG+ PPA V+ E +G V+H YG TE+ G CAW +W LP +RA +
Sbjct: 296 HPVQAMVAGAAPPAKVIGAVEEMGIHVTHTYGLTEVYGPVTVCAWHDEWQDLPLEDRARI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L + + DP+T V RDG T GEI MRG ++M GYLK+PEAT++ + G
Sbjct: 356 KSRQGVRYPTLDGLMVADPQTLEPVPRDGNTLGEIFMRGNTVMKGYLKNPEATAEAFRGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + H DGY+EIKDR KD+IISGGENIS+ E+E L+ H V EAAVV R D
Sbjct: 416 WFHTGDLAVWHADGYVEIKDRLKDIIISGGENISTIEVEDTLFKHHAVLEAAVVARADEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+LK G + T E DII +CR + + VPKTVVF ELPKT+TGK+QK
Sbjct: 476 WGETPCAFVALKPGHEH----TRESDIIGWCREHMAGFKVPKTVVF-GELPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL D A ++
Sbjct: 531 YVLRDRAKAL 540
>gi|386829256|ref|ZP_10116363.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Beggiatoa
alba B18LD]
gi|386430140|gb|EIJ43968.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Beggiatoa
alba B18LD]
Length = 542
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 250/547 (45%), Positives = 356/547 (65%), Gaps = 19/547 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PL+PL F+ERAA + ++++ +T YTW++TY RC +LAS+L GI
Sbjct: 10 LDKNNANYVPLSPLTFLERAAYVHPNHIAVVHGNTRYTWAETYARCRRLASALHKRGIKE 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+APN+PA++E F VPM GA+ NT+NTRLD I+ +L+H E+K++ D S
Sbjct: 70 GDTVAVMAPNVPAIFEASFGVPMIGAVLNTLNTRLDPEMIAFMLQHGEAKILITDKEFSP 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + P +++ DD+ S S + YE++L +GDP F W
Sbjct: 130 IISRALHFL----EKPPIIIDIDDEMAKSGSLLGEK--------DYESLLTEGDPNFQWQ 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
PK + + LNYT GTT PKGVV ++ ++ +V ++I W +PK +V LWTLPMFH N
Sbjct: 178 LPKDEWQAITLNYTSGTTGNPKGVVYHHRGAYLNSVSNIISWELPKHAVYLWTLPMFHCN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW F W A V TNVCLR+ +A ++ L+ VTH CGAPIV N+L ++P A ++
Sbjct: 238 GWCFPWTMAAVAGTNVCLRRIEADLIYDLVANEQVTHYCGAPIVHNMLLNAPRAVREKKH 297
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ + A + PPA VL E GF ++H YG TE G +V C W +W+ LP +RA L
Sbjct: 298 HLVKGMIAAAAPPAAVLEGMEKNGFKITHVYGLTETYGPSVVCEWHNEWDSLPIEDRARL 357
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGVR+ L + + DP T V DG+T GEI MRG ++M+GYLK+P+AT + G
Sbjct: 358 NARQGVRSHVLEGLMVADPTTLEPVPSDGKTLGEIFMRGNNVMMGYLKNPKATDEAFSGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G+MHPDGY+EIKDRSKD+IISGGENIS+ E+E VLY HP + EAAVV +PD
Sbjct: 418 WFHSGDLGVMHPDGYIEIKDRSKDIIISGGENISTIEVEDVLYRHPAILEAAVVAKPDEK 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++L+ D+G T ++II++CR+++ Y +P+ VVF +LPKT+TGK+QK
Sbjct: 478 WGETPCAFITLR--EDAG--TVTAQEIIEFCRSQMAHYKIPRHVVF-GQLPKTSTGKIQK 532
Query: 542 YVLGDIA 548
++L D A
Sbjct: 533 FILRDKA 539
>gi|357112583|ref|XP_003558088.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Brachypodium
distachyon]
Length = 574
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/566 (44%), Positives = 355/566 (62%), Gaps = 13/566 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL F+ERAA A D S+++ YTW++TYRRC +LAS+L+
Sbjct: 14 IDDLPRNDANYTALTPLWFLERAALAQPDRASVVHGPVRYTWAETYRRCRRLASALAQRS 73
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ G+ V+VIAPN+PA YE HF VPM GA+ N +N RL+A TI+ +L HS +++V VD
Sbjct: 74 VGHGNTVAVIAPNVPATYEAHFGVPMCGAVVNCVNIRLNAETIAFLLDHSMAEVVMVDQE 133
Query: 121 SSSLLLEVVSLFPPHSKT----PKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG 176
+L E + + K P L+++ D S R + YE L G
Sbjct: 134 FFTLAEESLKIVAERKKQEFRLPILLVVGDPTCNPKSLQYALRHGATE----YEEFLKTG 189
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
DP+F+W PK + + L YT GTTS+PKGVV ++ +++A+ + W +P+ ++ LWT
Sbjct: 190 DPEFNWKPPKDEWQSIALGYTSGTTSSPKGVVLHHRGAYLMALSVAMVWGMPEGAIYLWT 249
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
LPMFH NGW +TW A + T++CLR+ ++ I K GVTH C AP+V+N L ++P
Sbjct: 250 LPMFHCNGWCYTWALAALCGTSICLRQVSTKAIYTGIAKQGVTHFCAAPVVMNNLINAPA 309
Query: 297 AKQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKL 353
++ L R V ++ AG+ P +L GF V+H YG +E G + CAWKP+W+ L
Sbjct: 310 SETFLPLPRVVNVMLAGAAPTPSLLAALSIRGFRVTHTYGLSETYGPSTVCAWKPEWDNL 369
Query: 354 PARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
P ER+ L RQG+R L +D+VDP+T V DG++ GEIVMRG ++M GYLK+P+A
Sbjct: 370 PLEERSLLHCRQGIRYTALEGLDVVDPKTMAPVPADGKSYGEIVMRGNAVMKGYLKNPKA 429
Query: 414 TSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
++ G Y++GD+G+ HPDGY+E+KDR KD+IISGGENIS+ EIE VLY HP V EA+
Sbjct: 430 NAEAFAHGWYHSGDLGVKHPDGYIEVKDRMKDIIISGGENISTLEIEKVLYMHPDVLEAS 489
Query: 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPK 533
VV R D W E PCAFV+LK DS +I+++CR R+P Y VPK+V+F LPK
Sbjct: 490 VVARADERWGESPCAFVTLKESADSSDEAALAGNIMKFCRERMPGYWVPKSVIF-GPLPK 548
Query: 534 TATGKVQKYVLGDIANSMS-MSHSRM 558
TATGK++K+ L A + + SRM
Sbjct: 549 TATGKIKKHELRAKAKELGPVKKSRM 574
>gi|171315908|ref|ZP_02905137.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
gi|171098911|gb|EDT43701.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
Length = 550
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 251/551 (45%), Positives = 342/551 (62%), Gaps = 19/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ N AN PLTPL F++R A + +II+ D TW++T RC + AS+L GI P
Sbjct: 10 LEKNAANHVPLTPLTFLDRTADVFPNRTAIIHGDFRQTWAKTRERCYRFASALVRLGIEP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS+IAPN PAM E HF VP+SGA+ N IN RLDA I+ IL+H E KL+ VD +
Sbjct: 70 GDTVSIIAPNTPAMLEAHFGVPLSGAVLNAINCRLDADGIAFILRHGECKLLLVDRELAP 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L+ + + P P+++ I D + P I D YE++LA GDP+F+
Sbjct: 130 LVAKALQSVP---HPPRVIDINDHEAPDG-----PAIGETD----YESLLASGDPEFAGR 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
RP + P+ LNYT GTT PKGVV ++ +++++ + +W +P+ + LWTLPMFH N
Sbjct: 178 RPADEWTPIALNYTSGTTGDPKGVVPSHRGTYVMSLLQMTNWPLPRAPIYLWTLPMFHAN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLD 301
GW FTW T+VCLRK +A + + I +HGV H C APIVL ++S P E + L
Sbjct: 238 GWCFTWAITAAAGTHVCLRKVNAANILSAIAEHGVDHFCAAPIVLAGIASVPPSELQPLP 297
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R VR+LTAGSP PA VL ++GF V H YG TEIAG +SCAW +W+ LP ++ L
Sbjct: 298 RRVRVLTAGSPAPAAVLEAVGAMGFDVDHVYGITEIAGTPISCAWHDEWDTLPPEQQGRL 357
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR + + D V D GE+++RG ++M+GY K+ +AT+K G
Sbjct: 358 KARQGVRAAAFENMTVADLAALEPVPADSACCGEVLVRGNTVMMGYFKNADATAKAFAGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ ++HPDGY++I DRSKDVIISGGENISS E+E V+Y V AAVV +PD
Sbjct: 418 WFHTGDLAVVHPDGYIQITDRSKDVIISGGENISSVEVEEVIYRMSGVLNAAVVAQPDDK 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF+ LK TE+D+I +CR R+ + P+ V+F ELPKTATGK+QK
Sbjct: 478 WGETPCAFIELKPDASH----ITEQDVISFCRERLAHFKCPRRVIF-GELPKTATGKIQK 532
Query: 542 YVLGDIANSMS 552
+ L + A S +
Sbjct: 533 FRLREQAGSQA 543
>gi|170697406|ref|ZP_02888498.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria
IOP40-10]
gi|170137737|gb|EDT05973.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria
IOP40-10]
Length = 550
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 251/551 (45%), Positives = 344/551 (62%), Gaps = 19/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ N AN PLTPL F++R A + +II+ D TW++T RC + AS+L GI P
Sbjct: 10 LEKNAANHVPLTPLTFLDRTADVFPNRTAIIHGDFRQTWAKTRERCYRFASALVRMGIEP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS+IAPN PAM E HF VP+SGA+ N IN RLDA I+ IL+H E KL+ VD +
Sbjct: 70 GDTVSIIAPNTPAMLEAHFGVPLSGAVLNAINCRLDADGIAFILRHGECKLLLVDRELAP 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L+ + + P P+++ I D + P I D YE++LA GDP+F+
Sbjct: 130 LVKKALQSVP---HPPRVIDINDHEAPDG-----PAIGETD----YESLLASGDPEFAGR 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
RP + P+ LNYT GTT PKGVV ++ +++++ + +W +P+ + LWTLPMFH N
Sbjct: 178 RPADEWTPIALNYTSGTTGDPKGVVPSHRGTYVMSLLQMTNWPLPRAPIYLWTLPMFHAN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLD 301
GW FTW T+VCLRK +A + + I +HGV H C APIVL ++S P E + L
Sbjct: 238 GWCFTWAITAAAGTHVCLRKVNAANILSAITEHGVDHFCAAPIVLAGIASVPPSELQPLP 297
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R VR+LTAGSP PA VL ++GF V H YG TEIAG +SCAW +W+ LP ++ +
Sbjct: 298 RRVRVLTAGSPAPAAVLEAVGAMGFDVDHVYGITEIAGTPISCAWHDEWDTLPPDQQGRM 357
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR + + D T V D + GE+++RG ++M+GY K+ +AT+K G
Sbjct: 358 KARQGVRAAAFESMSVTDLATLEPVPADSTSCGEVLVRGNTVMMGYFKNADATAKAFGGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ ++HPDGY++I DRSKDVIISGGENISS E+E V+Y V AAVV +PD
Sbjct: 418 WFHTGDLAVVHPDGYIQITDRSKDVIISGGENISSVEVEEVIYRMAGVLNAAVVAQPDDK 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF+ LK TE+D+I +CR R+ + P+ V+F ELPKTATGK+QK
Sbjct: 478 WGETPCAFIELKPDASH----ITEQDVILFCRERLAHFKCPRRVIF-GELPKTATGKIQK 532
Query: 542 YVLGDIANSMS 552
+ L + A S +
Sbjct: 533 FRLREQAGSQA 543
>gi|172065065|ref|YP_001815777.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MC40-6]
gi|171997307|gb|ACB68224.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MC40-6]
Length = 550
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 252/551 (45%), Positives = 342/551 (62%), Gaps = 19/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ N AN PLTPL F++R A + +II+ D TW++T RC + AS+L GI P
Sbjct: 10 LEKNAANHVPLTPLTFLDRTADVFPNRTAIIHGDFRQTWAKTRERCYRFASALVRMGIEP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS+IAPN PAM E HF VP+SGA+ N IN RLDA I+ IL+H E KL+ VD +
Sbjct: 70 GDTVSIIAPNTPAMLEAHFGVPLSGAVLNAINCRLDADGIAFILRHGECKLLLVDRELAP 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L+ + + P P V+ +D E P I D YE++LA GDP+F+
Sbjct: 130 LVKKALQSVP----NPPRVIDINDHEAPDG----PAIGETD----YESLLASGDPEFAGR 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
RP + P+ LNYT GTT PKGVV ++ +++++ + +W +P+ + LWTLPMFH N
Sbjct: 178 RPADEWTPIALNYTSGTTGDPKGVVPSHRGTYVMSLLQMTNWPLPRAPIYLWTLPMFHAN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLD 301
GW FTW T+VCLRK +A + + I KHGV H C APIVL ++S P E + L
Sbjct: 238 GWCFTWAITAAAGTHVCLRKVNAANILSAIAKHGVDHFCAAPIVLAGIASVPPSELQPLP 297
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R VR+LTAGSP PA VL ++GF V H YG TEIAG +SCAW +W+ L ++ +
Sbjct: 298 RRVRVLTAGSPAPAAVLEAAGAMGFDVDHVYGITEIAGTPISCAWHDEWDTLAPDQQGRM 357
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR + + D T V D + GE+++RG ++M+GY K+ +AT+K G
Sbjct: 358 KARQGVRAAAFENMSVADLATLEPVPVDSTSCGEVLVRGNTVMMGYFKNADATAKAFAGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ ++HPDGY++I DRSKDVIISGGENISS E+E V+Y V AAVV +PD
Sbjct: 418 WFHTGDLAVVHPDGYIQITDRSKDVIISGGENISSVEVEEVIYRMAGVLNAAVVAQPDDK 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF+ LK TE+D+I +CR R+ + P+ V+F ELPKTATGK+QK
Sbjct: 478 WGETPCAFIELKPDASP----ITEQDVILFCRERLAHFKCPRRVIF-GELPKTATGKIQK 532
Query: 542 YVLGDIANSMS 552
+ L + A S +
Sbjct: 533 FRLREQAGSQA 543
>gi|326521182|dbj|BAJ96794.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 579
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/565 (44%), Positives = 356/565 (63%), Gaps = 11/565 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL F+ERAA A D S+++ YTW++TYRRC +LAS+L+
Sbjct: 19 IDDLPRNDANYTALTPLWFLERAALAQPDRASVVHGPVRYTWAETYRRCRRLASALARRS 78
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ G V+V+APN+PA+YE HF VPMSGA+ N IN RL+A TI+ +L HS +++V VD
Sbjct: 79 VGHGSTVAVVAPNVPAVYEAHFGVPMSGAVVNCINIRLNAETIAFLLDHSVAEVVMVDQE 138
Query: 121 SSSLL---LEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD 177
+L L++VS + P ++++ D S + YE+ L GD
Sbjct: 139 FFTLAEESLKIVSEKKKQNFRPPVLIVIADPTCEPKSL---QYALGQGAIEYEDFLKTGD 195
Query: 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
P+F+W PK + + L YT GTTS+PKGVV ++ +++A+ + W +P+ +V LWTL
Sbjct: 196 PEFNWKPPKDEWQSIALGYTSGTTSSPKGVVLHHRGAYLMALSVAMVWGMPEGAVYLWTL 255
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
PMFH NGW +TW A T++CLR+ ++ I K GVTH C AP+V+N L ++P +
Sbjct: 256 PMFHCNGWCYTWALAAFCGTSICLRQVSTKAIYTGIAKQGVTHFCAAPVVMNNLINAPAS 315
Query: 298 KQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLP 354
+ L R V ++ AG+ P +L GF V+H YG +E G + C WK +W+ LP
Sbjct: 316 ETFLPLPRVVNVMVAGAAPTPSLLAALSVRGFRVTHTYGLSETYGPSTVCVWKSEWDNLP 375
Query: 355 ARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEAT 414
ER+ L RQG+R L +D+VDP+T + V +G++ GEIVMRG ++M GYLK+P+A
Sbjct: 376 LEERSRLHCRQGIRYTALEGLDVVDPKTMVPVPANGKSYGEIVMRGNAVMKGYLKNPKAN 435
Query: 415 SKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474
++ G Y++GD+G+ HPDGY+E+KDR KD+IISGGENIS+ E+E V+Y HP V EA+V
Sbjct: 436 AEAFAHGWYHSGDLGVKHPDGYIEVKDRMKDIIISGGENISTLEVEKVVYMHPAVLEASV 495
Query: 475 VGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKT 534
V R D W E PCAFV+LK G + DI+++CR R+P Y VPK+VVF LPKT
Sbjct: 496 VARADDRWGESPCAFVTLKEGAGGSDEVALANDIMRFCRERMPGYWVPKSVVF-GPLPKT 554
Query: 535 ATGKVQKYVLGDIANSMS-MSHSRM 558
ATGK++K+ L A + + SRM
Sbjct: 555 ATGKIKKHELRAKAKELGPVKKSRM 579
>gi|149375957|ref|ZP_01893724.1| acyl-CoA synthase [Marinobacter algicola DG893]
gi|149359837|gb|EDM48294.1| acyl-CoA synthase [Marinobacter algicola DG893]
Length = 542
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/550 (45%), Positives = 342/550 (62%), Gaps = 18/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+P AN+ LTPL F+ R A+ + P++I+ T W QTY RC +LAS+L+ G+
Sbjct: 9 LEPTDANNATLTPLDFLARTASVYPEYPAVIHGATRRNWQQTYERCRRLASALADRGVGK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIP M E HF +PM GA+ N +NTRLDA+ I+ +L+H E+K++ D
Sbjct: 69 GDTVAAMLPNIPPMLECHFGIPMLGAVLNALNTRLDAKAIAFMLEHGEAKVLIADREFGD 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ E V + P V+ +D E S + + ++ D Y+ +A GDP F W
Sbjct: 129 VINEAVGML----DNPPQVIDVNDPEFSGAGT---QVSDLD----YDAFVASGDPAFDWQ 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + L YT GTT PKGVV ++ + A+ + W + V LWTLPMFH N
Sbjct: 178 MPADEWDAISLCYTSGTTGNPKGVVYHHRGAYENAMGNQAVWSMGMHPVYLWTLPMFHCN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W T+VCLRK + + LI +H V+HMCGAPIVLN L + EA +
Sbjct: 238 GWCFPWTITAFAGTHVCLRKVEPEKILQLISEHKVSHMCGAPIVLNTLLGASEAAKSSFS 297
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ +TAG+ PPA V+ E++GF V+H YG TE+ G CAWK +W+ LP +RA +
Sbjct: 298 HTVQAMTAGAAPPAKVIEAIENMGFRVTHVYGLTEVYGPVTVCAWKSEWDDLPVEDRARI 357
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L + + DPET +V +DG T GEI +RG ++M GYLK+P+AT + + G
Sbjct: 358 KARQGVRYHTLAGMMVGDPETMEAVPKDGNTIGEIFLRGNTVMKGYLKNPKATEEAFRGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + H DGY EIKDR KD+IISGGENIS+ E+E VLY HP + EAAVV RPD
Sbjct: 418 WFHTGDLAVWHADGYAEIKDRLKDIIISGGENISTIEVEDVLYRHPDILEAAVVARPDEK 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+LK +E DII +CR R+ ++ VPKT+VF ELPKT+TGK+QK
Sbjct: 478 WGETPCAFVTLKPEAGE----VSEDDIIAFCRERMAKFKVPKTIVF-SELPKTSTGKIQK 532
Query: 542 YVLGDIANSM 551
+VL D A +
Sbjct: 533 FVLRDDAKKL 542
>gi|299533871|ref|ZP_07047238.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni S44]
gi|298718155|gb|EFI59145.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni S44]
Length = 548
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 258/551 (46%), Positives = 341/551 (61%), Gaps = 17/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PN AN LTPLGFI R A + +I++ D +W+QTY RC QLASSL GI
Sbjct: 9 LAPNTANHAALTPLGFIARTAEVYPERLAIVHGDLRQSWAQTYARCRQLASSLQKIGIGK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V+V+ PN P M E HF VPM+GA+ NT+NTRLDA T++ +L H E+K + VD +
Sbjct: 69 NDTVAVMLPNTPPMVEAHFGVPMAGAVLNTLNTRLDAETLAFMLDHGEAKALIVDPEFAP 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L+ + L S P V+ +D ++ +I D YE+ +A+GD F W
Sbjct: 129 LMARALKL--RQSTVPIYVIEVEDPVYGEAAE---QIGAID----YESFVAQGDAGFDWQ 179
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ A+ ++++W +PK +V LWTLPMFH N
Sbjct: 180 LPGDEWDAIALNYTSGTTGNPKGVVYHHRGAHNNAISNVLEWDMPKHAVYLWTLPMFHCN 239
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW F W A A NVCLR+ DA +F IR HGV+H CGAPIV +LL ++P A + P
Sbjct: 240 GWCFPWTVAARAAVNVCLRRVDAQAIFDAIRNHGVSHYCGAPIVHSLLVNAPAAMKQGVP 299
Query: 304 --VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ + AG+ PPA ++ E++GF ++H YG TE G CA WN L ERA L
Sbjct: 300 AGVKAMVAGAAPPASMIEGMEAMGFDITHVYGLTETYGPATVCAKHESWNALDIGERARL 359
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
+RQGVR ++DPET V DGQT GEI+ +G M GYLK+P+AT + + G
Sbjct: 360 NSRQGVRYHLQRSAAVLDPETMQPVPHDGQTMGEIMFQGNIAMKGYLKNPQATQEAFRGG 419
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+ + HPDGY++IKDRSKD+IISGGENISS E+E VLY HP V AAVV +PDP
Sbjct: 420 WFHSGDLAVQHPDGYIQIKDRSKDIIISGGENISSIEVEDVLYRHPAVLAAAVVAKPDPK 479
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF+ LK G + TT +DII +C+ + Y VP+ VVF ELPKT+TGK+QK
Sbjct: 480 WGETPCAFIELKAGAE-----TTAEDIIAHCKKHLAGYKVPRAVVF-GELPKTSTGKIQK 533
Query: 542 YVLGDIANSMS 552
+ L A S S
Sbjct: 534 FELRKQAGSAS 544
>gi|125537833|gb|EAY84228.1| hypothetical protein OsI_05608 [Oryza sativa Indica Group]
Length = 571
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 254/552 (46%), Positives = 366/552 (66%), Gaps = 14/552 (2%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDT--TYTWSQTYRRCLQLASSLSSFGINPGHV 66
AN PLTP+ F++RAA D P+I+ + + T TW +T RCL+L ++L++ G++ HV
Sbjct: 9 ANHAPLTPITFLDRAALVYPDRPAIVASSSGLTRTWRETRDRCLRLTAALAALGVHRHHV 68
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V+V A NIPAM ELHF +PM+GA+ T+N+RLDA S++L+HSE+KL+FVD +
Sbjct: 69 VAVFAQNIPAMCELHFGIPMAGAVICTLNSRLDAAMASVLLRHSEAKLIFVDCALLDVAH 128
Query: 127 EVVSLFPPHSKTPK-LVLITDDKEISSSSSPPPRIPPADFVDTYENML--AKGDPQFSWV 183
+ + TP LVLI++ + S + ++P YE+++ A P+F+
Sbjct: 129 DAIRRISQSGATPPVLVLISELLDDPSDA----KLPSGRVDYEYEHLVGNAGSSPEFAVR 184
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + +P+ LNYT GTTS PKGV+ ++ ++ ++ +++ + V LWT+PMFH N
Sbjct: 185 WPADENEPIALNYTSGTTSRPKGVIYSHRGAYLNSLAAVLLNDMASTPVYLWTVPMFHCN 244
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLD 301
GW WG A G TNVC+R+ A T+F + +HGVTHM GAP VL+++ +++ E + +
Sbjct: 245 GWCMAWGVAAQGGTNVCVRRVTAATIFDAVARHGVTHMGGAPTVLSMIVNATAEEQRPVA 304
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R V ++T G+PPP VL R E GF+V H YG TE G C W+P+W+ LPA ERA +
Sbjct: 305 RRVTVMTGGAPPPPKVLHRMEEQGFLVIHSYGLTETYGPATVCTWRPEWDALPAEERARI 364
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGV GL EVD+ DP T SV RDG+T GE+++RG ++M GY KD AT++ + G
Sbjct: 365 KSRQGVHHHGL-EVDVKDPATMRSVPRDGKTMGEVMLRGNTVMSGYYKDGAATAEALAGG 423
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GD+ + H DGY+++ DRSKD+IISGGENIS+ E+E+ L+SHP V EAAVVGRPD +
Sbjct: 424 WFRSGDLAVRHEDGYVKVLDRSKDIIISGGENISTIEVEAALFSHPAVEEAAVVGRPDDY 483
Query: 482 WQEIPCAFVSLKTGTDSGGMM-TTEKDIIQYCRARIPRYMVPKTVVFIDE-LPKTATGKV 539
W E PCAFV L+ G + E++++ YCRAR+PRYM P+TVV ++E LPKTATGKV
Sbjct: 484 WGETPCAFVKLRPGAAAAAKAGVVEEELMAYCRARLPRYMAPRTVVVVEEGLPKTATGKV 543
Query: 540 QKYVLGDIANSM 551
QK+ L A +M
Sbjct: 544 QKFELRARAKAM 555
>gi|163793174|ref|ZP_02187150.1| acyl-CoA synthase [alpha proteobacterium BAL199]
gi|159181820|gb|EDP66332.1| acyl-CoA synthase [alpha proteobacterium BAL199]
Length = 541
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/545 (46%), Positives = 352/545 (64%), Gaps = 20/545 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN LTPL F++RAAT D +I++ + +T++Q Y+R +LAS+L + GI G VS
Sbjct: 15 ANHASLTPLDFLDRAATTYPDRVAIVHGEHRWTYAQKYQRARRLASALVARGIGVGDTVS 74
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
V+ PN PAM E H+ VPMSGA+ N INTRLDA TI+ IL H+ESKLV VD ++++ E
Sbjct: 75 VLLPNTPAMLEAHYGVPMSGAVLNAINTRLDAPTIAFILDHAESKLVIVDREFTAVMAEA 134
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
V+ P ++ + D ++ P + A+ YE +LA GDP+F+WV P +
Sbjct: 135 VA---ASRSKPPVIWVND--PLAEHGEP---LGEAE----YEELLAAGDPEFAWVGPTDE 182
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
+ LNYT GTT PKGVV ++ F+ A + I + + +++ LWTLPMFH NGW+FT
Sbjct: 183 WQAIALNYTSGTTGNPKGVVFHHRGAFLNASGNAIAFGLNRETRYLWTLPMFHCNGWTFT 242
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLDRPVRI 306
W V T+VCLRK D +F I + V+HMCGAPIVL +L +PE ++ D V I
Sbjct: 243 WAVTAVCGTHVCLRKVDPTLIFPSIADNLVSHMCGAPIVLTMLIHAPETVRRRFDHTVSI 302
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
T G+ PP+ V+ E +GF V+H YG TE G + CAW P+W+ L +A ARQG
Sbjct: 303 ATGGAAPPSAVIAGMERMGFKVTHLYGLTETYGPSTICAWPPEWDALEPDAKARKMARQG 362
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
V+ + + +VD ETG V DGQT GE+ +RG ++M GYLK+P+AT + + +G ++TG
Sbjct: 363 VQYPTIEGMRVVDTETGRDVPLDGQTIGELWLRGNTVMKGYLKNPKATGEALAEGWFHTG 422
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+ ++HPDGY E+KDRSKD+IISGGENISS E+E VL+ HP V EAAVV R D W E P
Sbjct: 423 DLAVLHPDGYAEVKDRSKDIIISGGENISSLEVEDVLFRHPGVMEAAVVARSDERWGETP 482
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546
CAFV++K G T +++I YCR + R+ PKTVVF ELPKT+TGK+QK+VL +
Sbjct: 483 CAFVTVKPGAS-----LTAEEVIAYCRENMARFKAPKTVVF-GELPKTSTGKIQKFVLRE 536
Query: 547 IANSM 551
A ++
Sbjct: 537 RAEAL 541
>gi|115443839|ref|NP_001045699.1| Os02g0119200 [Oryza sativa Japonica Group]
gi|41052614|dbj|BAD08123.1| putative adenosine monophosphate binding protein [Oryza sativa
Japonica Group]
gi|41053251|dbj|BAD07619.1| putative adenosine monophosphate binding protein [Oryza sativa
Japonica Group]
gi|113535230|dbj|BAF07613.1| Os02g0119200 [Oryza sativa Japonica Group]
Length = 571
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 254/552 (46%), Positives = 366/552 (66%), Gaps = 14/552 (2%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDT--TYTWSQTYRRCLQLASSLSSFGINPGHV 66
AN PLTP+ F++RAA D P+I+ + + T TW +T RCL+L ++L++ G++ HV
Sbjct: 9 ANHAPLTPITFLDRAALVYPDRPAIVASSSGLTRTWRETRDRCLRLTAALAALGVHRHHV 68
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V+V A NIPAM ELHF +PM+GA+ T+N+RLDA S++L+HSE+KL+FVD +
Sbjct: 69 VAVFAQNIPAMCELHFGIPMAGAVICTLNSRLDAAMASVLLRHSEAKLIFVDCALLDVAH 128
Query: 127 EVVSLFPPHSKTPK-LVLITDDKEISSSSSPPPRIPPADFVDTYENML--AKGDPQFSWV 183
+ + TP LVLI++ + S + ++P YE+++ A P+F+
Sbjct: 129 DAIRRISQSGATPPVLVLISELLDDPSDA----KLPSGRVDYEYEHLVGNAGSSPEFAVR 184
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + +P+ LNYT GTTS PKGV+ ++ ++ ++ +++ + V LWT+PMFH N
Sbjct: 185 WPADENEPIALNYTSGTTSRPKGVIYSHRGAYLNSLAAVLLNDMASTPVYLWTVPMFHCN 244
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLD 301
GW WG A G TNVC+R+ A T+F + +HGVTHM GAP VL+++ +++ E + +
Sbjct: 245 GWCMAWGVAAQGGTNVCVRRVTAATIFDAVARHGVTHMGGAPTVLSMIVNATAEEQRPVA 304
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R V ++T G+PPP VL R E GF+V H YG TE G C W+P+W+ LPA ERA +
Sbjct: 305 RRVTVMTGGAPPPPKVLHRMEEQGFLVIHSYGLTETYGPATVCTWRPEWDALPAEERARI 364
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGV GL EVD+ DP T SV RDG+T GE+++RG ++M GY KD AT++ + G
Sbjct: 365 KSRQGVHHHGL-EVDVKDPATMRSVPRDGKTMGEVMLRGNTVMSGYYKDGAATAEALAGG 423
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GD+ + H DGY+++ DRSKD+IISGGENIS+ E+E+ L+SHP V EAAVVGRPD +
Sbjct: 424 WFRSGDLAVRHEDGYVKVLDRSKDIIISGGENISTIEVEAALFSHPAVEEAAVVGRPDDY 483
Query: 482 WQEIPCAFVSLKTGTDSGGMM-TTEKDIIQYCRARIPRYMVPKTVVFIDE-LPKTATGKV 539
W E PCAFV L+ G + E++++ YCRAR+PRYM P+TVV ++E LPKTATGKV
Sbjct: 484 WGETPCAFVKLRPGAAAAAKAGVVEEELMAYCRARLPRYMAPRTVVVVEEGLPKTATGKV 543
Query: 540 QKYVLGDIANSM 551
QK+ L A +M
Sbjct: 544 QKFELRARAKAM 555
>gi|414171951|ref|ZP_11426862.1| hypothetical protein HMPREF9695_00508 [Afipia broomeae ATCC 49717]
gi|410893626|gb|EKS41416.1| hypothetical protein HMPREF9695_00508 [Afipia broomeae ATCC 49717]
Length = 549
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 258/550 (46%), Positives = 346/550 (62%), Gaps = 21/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PL+PL F+ R+A D S +Y D ++TW+QTY RC + AS L GI
Sbjct: 12 LDKNAANYVPLSPLSFLARSAAVYPDHVSTVYEDRSFTWAQTYERCKRFASFLVKRGIQR 71
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM E HFAVPM+G + N +N RLDA +I+ L H +K++ VD S
Sbjct: 72 GDTVAVMLPNIPAMNEAHFAVPMAGGVLNALNIRLDAASIAFQLDHGGAKIILVDPEFSG 131
Query: 124 LLLEVVSLFPPHSKTPK-LVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ + + L K PK LV+ DD + RI + YE +A GDP F+W
Sbjct: 132 VISDALGLM----KGPKPLVIDVDDAAFAGGK----RIGEIE----YEAAVASGDPDFAW 179
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
+P+ + D + L YT GTT PKGVV Y+ ++ AV +++ + + LWTLPMFH
Sbjct: 180 HQPQDEWDAIALGYTSGTTGNPKGVVTHYRGAYLNAVSNILAGNLGTHPIYLWTLPMFHC 239
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--L 300
NGW F W AV NVCLRK D +F LI+ HGVTHMCGAPIV N L ++P+A +
Sbjct: 240 NGWCFPWTIAVSAGINVCLRKVDPAKIFELIKAHGVTHMCGAPIVYNTLINAPDAPKGSA 299
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
+PV L AG+ PP VL ES+G ++H YG TE+ G CA +P W+ LPA +RA
Sbjct: 300 AKPVVGLIAGAAPPVAVLEGAESIGIKLTHVYGLTEVYGPASVCAEQPGWDDLPADQRAQ 359
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
LK RQGV V ++DP+T V RDG+T GE+++RG +M GYL + +AT + +
Sbjct: 360 LKRRQGVPYPLEEAVTVLDPDTMQPVPRDGETIGEVMIRGNIVMKGYLNNEKATKEAFEG 419
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+G++ DGY+ IKDRSKD+IISGGENISS E+E VLY HP V AAVV +PDP
Sbjct: 420 GWFHTGDLGVLDKDGYVIIKDRSKDIIISGGENISSVEVEDVLYKHPAVLFAAVVAKPDP 479
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV LK G + TE +I+ YC++ +P + PK+VVF +PKT+TGK+Q
Sbjct: 480 KWGEVPCAFVELKDGATA-----TEAEILSYCKSILPGFKSPKSVVF-GAIPKTSTGKIQ 533
Query: 541 KYVLGDIANS 550
K+ L D ANS
Sbjct: 534 KFALRDQANS 543
>gi|319762045|ref|YP_004125982.1| AMP-dependent synthetase/ligase [Alicycliphilus denitrificans BC]
gi|317116606|gb|ADU99094.1| AMP-dependent synthetase and ligase [Alicycliphilus denitrificans
BC]
Length = 548
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 256/551 (46%), Positives = 339/551 (61%), Gaps = 17/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PL+PL FIER A D +I++ TW QTY RC +LASSL + GI
Sbjct: 9 LPRNEANHAPLSPLSFIERTAEVYPDRLAIVHGGLRQTWGQTYARCRRLASSLRAAGIGK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V+V+ PN P M E HF VPM+GA+ N +NTRLD TI+ +L H E++ V VD +
Sbjct: 69 NDTVAVMLPNTPPMVEAHFGVPMAGAVLNALNTRLDPETIAFMLDHGEARAVIVDPEFAP 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ ++L SK P L++ +D +++ R+ TYE LA GDPQF+W
Sbjct: 129 VMARALAL--RQSKAPLLLIDVEDAVYGAAAE---RLG----TQTYEEFLAAGDPQFAWE 179
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ I A+ ++++W +PK SV LWTLPMFH N
Sbjct: 180 LPGDEWDAIALNYTSGTTGNPKGVVYHHRGAAINAISNVLEWDMPKHSVYLWTLPMFHCN 239
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW F W A NVCLR+ +A +F +R HGVTH CGAPIV LL ++P A + P
Sbjct: 240 GWCFPWTVAARAGVNVCLRRVEAQAIFDAMRSHGVTHYCGAPIVHGLLVNAPAAMKEGVP 299
Query: 304 --VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ + AG+ PPA ++ E LGF ++H YG TE+ G CA WN L ERA L
Sbjct: 300 AGVKAMVAGAAPPASMIEGMEKLGFDLTHVYGLTEVYGPATVCARHDAWNALDVGERARL 359
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGVR ++DPET V RDG+T GEI+ RG M GYLK+P AT + G
Sbjct: 360 NARQGVRYHLQRAAAVLDPETMQPVPRDGETMGEIMFRGNIAMKGYLKNPAATGDAFRGG 419
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+ + + DGY++IKDRSKD+IISGGENISS E+E VLY HP V AAVV +PDP
Sbjct: 420 WFHSGDLAVQYLDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPDVLAAAVVAKPDPK 479
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK G + T +DI+ +C+ + + VP+ +VF ELPKT+TGK+QK
Sbjct: 480 WGETPCAFVELKAGAQA-----TPEDIVAHCKKHLAGFKVPRAMVF-GELPKTSTGKIQK 533
Query: 542 YVLGDIANSMS 552
+ L A S +
Sbjct: 534 FELRRQAGSAA 544
>gi|386817691|ref|ZP_10104909.1| AMP-dependent synthetase and ligase [Thiothrix nivea DSM 5205]
gi|386422267|gb|EIJ36102.1| AMP-dependent synthetase and ligase [Thiothrix nivea DSM 5205]
Length = 547
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 252/551 (45%), Positives = 347/551 (62%), Gaps = 18/551 (3%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L+ AN L+PL F+ERAA+ + ++++ + TW++TYRRC QLAS+LS GI
Sbjct: 10 HLEQVAANYEALSPLTFLERAASVFPERIAVVHGEVRRTWAETYRRCCQLASALSQRGIG 69
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G VS+I PN+P +E HF VPM GA+ N+INTRLDA +++ ILKH+E+K++ + +
Sbjct: 70 VGDTVSIICPNLPEHFEAHFGVPMVGAVLNSINTRLDAASVAFILKHAEAKVLITEREMA 129
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD-TYENMLAKGDPQFS 181
+++ +SL V+ DD P + A D TYE +A G P F+
Sbjct: 130 AVVNHALSLLEDDEYPLPFVIDIDD---------PTFVGGALLGDVTYEQFIAAGIPGFA 180
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W RP + + + LNYT GTT PKGVV ++ + AV +++ W +P +V LWTLPMFH
Sbjct: 181 WRRPDDEWNAISLNYTSGTTGDPKGVVYHHRGAHLNAVSNVLSWGMPNGAVYLWTLPMFH 240
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A V TNVCLR A + A I+ V HMCGAPIVL+++ +P ++
Sbjct: 241 CNGWCFPWTVAAVAGTNVCLRHVRADQILAAIKAEKVDHMCGAPIVLSMMMGAPAEQKAG 300
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+ V+++TAG+PPPA V+ E +GF V+ YG TE G V W+ W+ LP ERA
Sbjct: 301 ISHQVKVMTAGAPPPAAVIQGMEEMGFDVTQVYGLTETYGPCVVSEWQHDWDGLPIAERA 360
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKARQGVR + + DP T V+RDG+T GEI MRG +M GYLK+P T+
Sbjct: 361 RLKARQGVRVQLQEGLMVADPATLEPVERDGETIGEIFMRGNIVMKGYLKNPATTAAAFA 420
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+ + HPDGY+EIKDRSKD+IISGGENISS E+E LY HP V + AVV R D
Sbjct: 421 GGWFHSGDLAVWHPDGYVEIKDRSKDIIISGGENISSIELEDTLYRHPAVQDVAVVARQD 480
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+PCAF+ LK G + +E+D+I YCR + R+ VPK VVF+D LP+T+TGKV
Sbjct: 481 EKWGEVPCAFIKLKDGAN-----LSEEDVIAYCRENMARFKVPKKVVFVD-LPRTSTGKV 534
Query: 540 QKYVLGDIANS 550
QK++L + A +
Sbjct: 535 QKFILREWAQA 545
>gi|89092399|ref|ZP_01165353.1| probable AMP-binding enzyme [Neptuniibacter caesariensis]
gi|89083487|gb|EAR62705.1| probable AMP-binding enzyme [Oceanospirillum sp. MED92]
Length = 544
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 252/545 (46%), Positives = 342/545 (62%), Gaps = 24/545 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN LTPL FIERAAT D ++IY D TWSQTY RC++LAS+L G+
Sbjct: 13 LDKNAANYAALTPLSFIERAATVYPDRTAVIYGDLQRTWSQTYERCIRLASALRKRGVGE 72
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIP M ELHFAVPM+GA+ NT NTRLDA TI+ +L H E+++V D S+
Sbjct: 73 GDTVAVMLPNIPEMLELHFAVPMTGAVLNTQNTRLDAETIAFMLDHGEARVVITDREFSN 132
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD--TYENMLAKGDPQFS 181
++ V + S P LV + D P+ + + TYE +LA+GD
Sbjct: 133 VMERAVRMA---SVDPLLVDVDD-----------PQFTGGELIGSLTYEQLLAEGDINDH 178
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P+ + + LNYT GTT PKGVV ++ + A ++I +P +V LWTLPMFH
Sbjct: 179 WSPPEDEWQAITLNYTSGTTGNPKGVVYHHRGAHLNATSNIIGQNLPPHAVYLWTLPMFH 238
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL- 300
NGW + W V T+VCLR VF LI+ GVTH CGAP+VLN+L ++PE ++
Sbjct: 239 CNGWCYPWSVTAVAGTHVCLRHLLPEKVFELIQACGVTHFCGAPVVLNMLLNAPEESKML 298
Query: 301 -DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
D PV + T G+ PPA ++ E +G V H YG TE G +V CA + +W+++ ++A
Sbjct: 299 VDHPVTVTTGGAAPPAAIIEGMEKIGIKVVHAYGLTESYGPSVFCAHQDEWDQMVLEDKA 358
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+ ARQGVR L ++ + DPET V RDG+T GE+ MRG ++M GYLK+P A+
Sbjct: 359 AKMARQGVRAPALEQLMVGDPETMAPVPRDGKTMGEVFMRGNNVMKGYLKNPSASDAAFS 418
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+ + H DGY+E+KDRSKDVIISGGENIS+ E+E +LY HP + EAAVV +PD
Sbjct: 419 GGWFHSGDLAVWHEDGYIEVKDRSKDVIISGGENISTIEVEDMLYRHPAILEAAVVAKPD 478
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+PCAFV+LK G + TE +II++ R+ + + PK VVF LPKT+TGKV
Sbjct: 479 EHWGEVPCAFVTLKDGQSA-----TEAEIIEFTRSNMAHFKCPKKVVFA-PLPKTSTGKV 532
Query: 540 QKYVL 544
QK+ L
Sbjct: 533 QKFAL 537
>gi|224099191|ref|XP_002311397.1| predicted protein [Populus trichocarpa]
gi|222851217|gb|EEE88764.1| predicted protein [Populus trichocarpa]
Length = 566
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 248/556 (44%), Positives = 354/556 (63%), Gaps = 9/556 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L NPAN LTPL F+ERAAT SI++ YTW +TY+RC + AS+LS+
Sbjct: 7 IDDLPKNPANYMSLTPLWFLERAATVHPTRTSIVHESVQYTWQETYQRCCRFASALSNRS 66
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ G V+VIAPN+PA+YE HF VPM+GA+ N +N RL+A+ I+ +L HS+S++V VD
Sbjct: 67 LGLGRTVAVIAPNVPALYEAHFGVPMAGAVVNCVNIRLNAQAIAFLLGHSKSEVVMVDQE 126
Query: 121 SSSLLLEVVSLFPPHSKT--PKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP 178
+L+ E + ++ + K P L+++ DK S YE L GDP
Sbjct: 127 FFTLVEEALKIWEGNEKNFKPPLLVVIGDKSCDPKSL---EYALGRGAIEYEKFLESGDP 183
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
+F W P+ + + L YT GTTS+PKGVV ++ +++ + + + W + + ++ LWTLP
Sbjct: 184 EFDWKPPEDEWQSIALGYTSGTTSSPKGVVLSHRGAYLMCLSNPVIWGMDEGAIYLWTLP 243
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEA 297
MFH NGW FTW A + ++CLR+ A +++ I GV+H C AP+VLN ++++S E
Sbjct: 244 MFHCNGWCFTWTLAALCVKSICLRQVTAKAIYSAIAYAGVSHFCAAPVVLNTIINASKEE 303
Query: 298 KQLDRP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
L P V ++TAG+ PP VL GF V+H YG +E G + CAWKP+W+ LP
Sbjct: 304 TILPLPRLVHVMTAGAAPPPSVLFSMSEKGFRVTHTYGLSETYGPSTVCAWKPEWDSLPP 363
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
++A L ARQGVR +GL +D+VD +T V DG+T GEIVMRG +M GYLK+P+A
Sbjct: 364 IKQARLNARQGVRYVGLERLDVVDTKTMKPVPADGKTMGEIVMRGNVVMKGYLKNPKANE 423
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
+ +G +++GD+G+ +PDGY+EIKDRSKD+IISGGENISS E+E+VLY HP + E +VV
Sbjct: 424 EAFANGWFHSGDLGVKNPDGYIEIKDRSKDIIISGGENISSLEVENVLYMHPAIYEVSVV 483
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
R W E PCAFV+LK + DI+++ R+ +P Y VP+++VF LPKTA
Sbjct: 484 ARLHERWGESPCAFVTLKPEMEKSDKQQLIDDIMKFSRSNMPAYWVPRSIVF-GPLPKTA 542
Query: 536 TGKVQKYVLGDIANSM 551
TGK+QK+VL A M
Sbjct: 543 TGKIQKHVLRAKAREM 558
>gi|344344385|ref|ZP_08775248.1| o-succinylbenzoate--CoA ligase [Marichromatium purpuratum 984]
gi|343804055|gb|EGV21958.1| o-succinylbenzoate--CoA ligase [Marichromatium purpuratum 984]
Length = 552
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/548 (45%), Positives = 346/548 (63%), Gaps = 19/548 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+P AN L+PL FIER A ++++ W++TYRRC QLAS+L GI
Sbjct: 13 LEPRAANHESLSPLNFIERTAAIYPRKLAMVHGTIRRDWAETYRRCRQLASALERRGIGR 72
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS++APNIPA +E HF VPM+GA+ N+INTRLDA I+ IL+H+E+ V VD +
Sbjct: 73 GDTVSIVAPNIPAHFEAHFGVPMTGAVLNSINTRLDAPAIAFILEHAEASAVLVDCECA- 131
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
EVV + LV+ D + + + +P I YE+ LA+GD W
Sbjct: 132 ---EVVGRALARIEREILVIDIADPDFTDAQAPIGEI-------DYESFLAEGDSDHQWS 181
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ ++ A+++++ W +P +V LWTLPMFH N
Sbjct: 182 VPDDEWRAITLNYTSGTTGDPKGVVYHHRGAYLGAINNVLSWGLPNHAVYLWTLPMFHCN 241
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP-EAKQ-LD 301
GW F W A + NVCLR A T+ I + GVTH+CGAPIVL +++ P EAK +
Sbjct: 242 GWCFPWTMAAMAGVNVCLRHVRAHTIVETIAREGVTHLCGAPIVLKMINEVPTEAKAAIT 301
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+ VR++TAG+PPP+ V+ E++GF V+H YG TE G V+CAW +W++L ERA L
Sbjct: 302 QSVRVMTAGAPPPSSVIAGMEAMGFEVTHVYGLTETYGPCVACAWNDEWDELALDERARL 361
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR + + DP T +++DG T GEI++RG +M GYLK+PE T + G
Sbjct: 362 KARQGVRMPMQAAIMVADPATLQPIRQDGVTLGEIMIRGNLVMKGYLKNPETTRRAFDRG 421
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+ + HPDGY+EIKDRSKD+IISGGENISS E+E VL+ HP+V + AVV + D
Sbjct: 422 WFHSGDLAVWHPDGYVEIKDRSKDIIISGGENISSIEVEEVLFGHPLVQDVAVVAKRDEK 481
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAF++L + +E+ +I YCRAR+ + PK VVF LP+T TGK+QK
Sbjct: 482 WGEVPCAFITLVADVE-----LSEQAVIDYCRARMAHFKAPKHVVFAT-LPRTPTGKLQK 535
Query: 542 YVLGDIAN 549
Y+L AN
Sbjct: 536 YLLRQWAN 543
>gi|264677333|ref|YP_003277239.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
gi|262207845|gb|ACY31943.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
Length = 548
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 256/549 (46%), Positives = 340/549 (61%), Gaps = 17/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PN AN LTPLGFI R A + +I++ D W+QTY RC QLASSL GI
Sbjct: 9 LTPNTANHAALTPLGFIARTAEVYPERLAIVHGDLRQNWAQTYARCRQLASSLQKIGIGK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V+V+ PN P M E HF VPM+GA+ NT+NTRLDA T++ +L H E++ + VD +
Sbjct: 69 NDTVAVMLPNTPPMVEAHFGVPMAGAVLNTLNTRLDAETLAFMLDHGEARALIVDPEFAP 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L+ + L S P V+ +D ++ +I D YE+ +A+GD F W
Sbjct: 129 LMARALKL--RQSTVPIYVIQVEDPVYGEAAE---QIGAID----YESFVAQGDAGFDWQ 179
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ A+ ++++W +PK +V LWTLPMFH N
Sbjct: 180 LPGDEWDAIALNYTSGTTGNPKGVVYHHRGAHNNAISNVLEWDMPKHAVYLWTLPMFHCN 239
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW F W A A N+CLR+ DA +F IR HGV+H CGAPIV +LL ++P A + P
Sbjct: 240 GWCFPWTVAARAAVNICLRRVDAQAIFDAIRNHGVSHYCGAPIVHSLLVNAPAAMKQGVP 299
Query: 304 --VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ + AG+ PPA ++ E++GF ++H YG TE G CA WN L ERA L
Sbjct: 300 AGVKAMVAGAAPPASMIEGMEAMGFDITHVYGLTETYGPATVCAKHESWNALDIGERARL 359
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
+RQGVR ++DPET V RDGQT GEI+ +G M GYLK+P+AT + + G
Sbjct: 360 NSRQGVRYHLQRSAAVLDPETMQPVPRDGQTMGEIMFQGNIAMKGYLKNPQATQEAFRGG 419
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+ + HPDGY++IKDRSKD+IISGGENISS E+E VLY HP V AAVV +PDP
Sbjct: 420 WFHSGDLAVQHPDGYIQIKDRSKDIIISGGENISSIEVEDVLYRHPAVLAAAVVAKPDPK 479
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF+ LK G + TT +DII +C+ + Y VP+ VVF ELPKT+TGK+QK
Sbjct: 480 WGETPCAFIELKAGAE-----TTAEDIIAHCKKHLAGYKVPRAVVF-GELPKTSTGKIQK 533
Query: 542 YVLGDIANS 550
+ L A S
Sbjct: 534 FELRKQAGS 542
>gi|22758279|gb|AAN05507.1| Putative AMP-binding protein [Oryza sativa Japonica Group]
gi|108706040|gb|ABF93835.1| AMP-dependent synthetase and ligase family protein, putative,
expressed [Oryza sativa Japonica Group]
gi|125542276|gb|EAY88415.1| hypothetical protein OsI_09875 [Oryza sativa Indica Group]
gi|125606385|gb|EAZ45421.1| hypothetical protein OsJ_30070 [Oryza sativa Japonica Group]
Length = 548
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 256/548 (46%), Positives = 354/548 (64%), Gaps = 25/548 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTP+ FI+RAA D +++ + YTW + RC++LA++L++ G VV+
Sbjct: 10 ANHAPLTPISFIQRAAAVYGDRAAVVCGERRYTWREARGRCVRLAAALAARG----DVVA 65
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD-HL--SSSLL 125
V++PN+PAMYELHFAVPM+GA+ T N R DA IS +L HS +K+ FV+ HL
Sbjct: 66 VLSPNVPAMYELHFAVPMAGAVLCTFNARHDAAMISTLLSHSGAKVFFVESHLLDVGRAA 125
Query: 126 LEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRP 185
L ++ + P L+ I+DD + S VD YE+++ +F P
Sbjct: 126 LRRLAGSTSAASLPVLLTISDDGAGARDSG---------CVD-YEDLVRDAPSEFDIRWP 175
Query: 186 KSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGW 245
++DP+ LNYT GTTS PKGVV ++ ++ + +++ + + LWT+PMFH NGW
Sbjct: 176 VDEMDPITLNYTSGTTSRPKGVVYNHRGAYLNTIATVLAYDITAMPTYLWTVPMFHCNGW 235
Query: 246 SFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLDRP 303
+ WG A+ G TN+CLR F A +F I +HGVTHM GAP VLN+++++P A + L P
Sbjct: 236 NLPWGVAMQGGTNICLRHFTAKVIFDSIARHGVTHMGGAPTVLNMIANAPAADRRALPGP 295
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
VR++T G+ PP VLL E LGF++ H YG TE G C W P+W+ LPA ERA LKA
Sbjct: 296 VRVMTGGAAPPPRVLLAVEELGFVLYHIYGLTETYGPATVCTWMPEWDALPAEERARLKA 355
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQG I + +V + + T +V DGQT GE++ RG ++M GY KD AT + M G
Sbjct: 356 RQGFHHIAVQDVAVKNSATMENVPYDGQTVGEVMFRGNTVMSGYYKDIGATKESMAGGWL 415
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
++GD+ + HPDGY+++KDR+KD+IISGGENISS E+ESV++SHP V EAAVV RPD +W
Sbjct: 416 HSGDLAVRHPDGYIQLKDRAKDIIISGGENISSIEVESVIFSHPAVLEAAVVARPDDYWG 475
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E PCAFV LK G ++ TE +II +CR R+P YM PKTVVF D+LPKT+TGK QK+V
Sbjct: 476 ETPCAFVKLKDGANA-----TEGEIISFCRERLPHYMAPKTVVF-DDLPKTSTGKTQKFV 529
Query: 544 LGDIANSM 551
L + A +M
Sbjct: 530 LREKARAM 537
>gi|410091589|ref|ZP_11288146.1| acyl-CoA synthetase [Pseudomonas viridiflava UASWS0038]
gi|409761130|gb|EKN46229.1| acyl-CoA synthetase [Pseudomonas viridiflava UASWS0038]
Length = 553
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 257/549 (46%), Positives = 344/549 (62%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN LTPL F+ER A D P++++ W+QTYRRC QLAS LS G+
Sbjct: 8 LSKGPANHMALTPLSFLERTAATYPDYPAVVHGAIRRDWAQTYRRCRQLASGLSQLGVQG 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM E+HF VPM GA+ NT+N RLDA I+ +L H E+K++ D
Sbjct: 68 GDTVAVMLPNIPAMLEVHFGVPMLGAVLNTLNVRLDASAIAFMLGHGEAKVLIADREFHV 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ +++ + P L++ DD E + + D YE +LA GDP+F W
Sbjct: 128 VVHAALAML----EHPPLLIDVDDPEYGEGRA----LSELD----YEALLAVGDPEFEWQ 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + P+ LNYT GTT PKGVV ++ F+ A+ + + W + V LWTLPMFH N
Sbjct: 176 WPEDEWAPISLNYTSGTTGDPKGVVYHHRGAFLNAIGNQMAWGMGLHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD-- 301
GW + W T+V LR+ D + LI +H V+H+CGAPIVLN L++ P A +
Sbjct: 236 GWCYPWTITAQAGTHVFLRRVDPQKIITLISEHKVSHLCGAPIVLNALANLPNAAAVSFG 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V +TAG+ PPA V+ E++G ++H YG TE G CAWK +W++LP E ASL
Sbjct: 296 HGVNAMTAGAAPPARVIASVEAMGICITHAYGLTETYGPVTVCAWKAEWDELPPDECASL 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L +V + DP T V +DGQT GEI MRG ++M GYL +P AT K + G
Sbjct: 356 KARQGVRYPTLEDVMVADPHTHQPVPKDGQTIGEIYMRGNTVMKGYLGNPAATDKAFEGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+ + H DGYLEI+DRSKD+IISGGENIS+ E+E VLY HP V EAAVV RPD
Sbjct: 416 WFHSGDLAVWHADGYLEIRDRSKDIIISGGENISTIEVEGVLYRHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+LKTG D T + I+++CR + + VPKTVVF LPKT+TGK+QK
Sbjct: 476 WGETPCAFVTLKTGCDQ----VTGEQIMRFCREHLAGFKVPKTVVFT-PLPKTSTGKIQK 530
Query: 542 YVLGDIANS 550
++L D A +
Sbjct: 531 FLLRDWAKN 539
>gi|410615676|ref|ZP_11326693.1| fatty-acyl-CoA synthase [Glaciecola psychrophila 170]
gi|410164802|dbj|GAC40582.1| fatty-acyl-CoA synthase [Glaciecola psychrophila 170]
Length = 588
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 250/554 (45%), Positives = 346/554 (62%), Gaps = 20/554 (3%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L AN L+PL FI+R A + ++++ + W++TY+RC Q+AS+LS +GI
Sbjct: 52 HLDKKSANFTALSPLTFIDRTAKVYPNHTAVVHGNIRRNWAETYQRCQQMASALSKYGIG 111
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G VS+IAPNIP +ELHFAVPM GA+ N+INTRLD+ + + IL+H+E+K++FVD S
Sbjct: 112 VGDTVSLIAPNIPEHFELHFAVPMCGAVLNSINTRLDSESFAFILEHAEAKVLFVDKEFS 171
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ + + + P LV+ DD I D YE L GD ++W
Sbjct: 172 GMVTKALDMLP----NDFLVIDIDDVNWQDGE----LIGSTD----YEAFLETGDQHYNW 219
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P + D + LNYT GTT PKGVV ++ ++ AV + + W + + V LWTLPMFH
Sbjct: 220 QPPSDEWDAISLNYTSGTTGDPKGVVYHHRGAYLNAVSNAMSWGMQQHPVYLWTLPMFHC 279
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQL 300
NGW F W A++ NVCLR A +F LI+ V + CGAPIVLN+L + S +
Sbjct: 280 NGWCFPWTVALMAGVNVCLRHVQADAIFDLIKSEEVNYFCGAPIVLNMLNLADSSLKSGI 339
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
+ V+++TAG+PPPA V+ E+LGF V+H YG TE G +V CAW W+K + +A
Sbjct: 340 EHKVKVMTAGAPPPAQVIEGMEALGFEVTHVYGLTETYGPSVVCAWHDDWSKQSPKNQAR 399
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
LK+RQGVR L + + DP+T + + +DG+T GEI M+G +M GYLK+P+ T K K
Sbjct: 400 LKSRQGVRAPMLDGLMVADPDTLIPIPQDGKTIGEIFMQGNLVMKGYLKNPKTTEKAFKG 459
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G + +GD+ + HPDGY+EIKDRSKD+IISGGENISS EIE VLY HP+V EAAVV
Sbjct: 460 GWFQSGDLAVWHPDGYIEIKDRSKDIIISGGENISSIEIEDVLYRHPLVQEAAVVAMKHE 519
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E PCAFV+LK TE+D+I +CRA + + P VVF ELPKT+TGK +
Sbjct: 520 KWGETPCAFVTLKLAE-----TCTEQDLIDFCRAHMAHFKAPTRVVF-GELPKTSTGKTR 573
Query: 541 KYVLGDIANSMSMS 554
K+ L +IA++ + S
Sbjct: 574 KFELREIADNNTAS 587
>gi|302761206|ref|XP_002964025.1| hypothetical protein SELMODRAFT_81559 [Selaginella moellendorffii]
gi|300167754|gb|EFJ34358.1| hypothetical protein SELMODRAFT_81559 [Selaginella moellendorffii]
Length = 573
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/570 (44%), Positives = 350/570 (61%), Gaps = 38/570 (6%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHV-- 66
AN PL+PL F+ERAA P++IYN +TWSQ +RC +LAS+L GI PG V
Sbjct: 6 ANYAPLSPLVFLERAAQIHPQRPAVIYNSRRFTWSQELQRCRRLASALRRRGIGPGDVEK 65
Query: 67 -----------------VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKH 109
V+V+APN+PAMYE+ F VPM+ A+ N +N RLD RT++ + +
Sbjct: 66 KFFLFCKIHGFFFLFCKVAVVAPNVPAMYEVQFGVPMASAVLNCVNIRLDQRTVATLFHY 125
Query: 110 SESKLVFVD----HLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADF 165
S K V VD HL S L + + + P +V+I D+ +S PP
Sbjct: 126 SGVKAVLVDEEFLHLISGALRDWTAKAGTLFQAPFVVVIRDEFFQGMENSWPPG------ 179
Query: 166 VDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDW 225
YE+ L +GDP F W RP+ + + + ++YT GTT++PKGV+ ++ ++ A+ + W
Sbjct: 180 SSDYEDFLREGDPSFEWTRPEDETETISVSYTSGTTASPKGVMLTHRGAYLSALSECVTW 239
Query: 226 VVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAP 285
+ + LWTLP+FH NGW F W A + TN+CLR+ A +FA I +H VT+ C AP
Sbjct: 240 EMKHGCIYLWTLPLFHCNGWCFPWAVAALAGTNICLRQVTAKGIFAAIAEHNVTNFCAAP 299
Query: 286 IVLNLLSSSPEAKQLDR----PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVN 341
VLN + S+ R VRI+TAG+ PPA VL + E+LGF V+H YG TE G
Sbjct: 300 TVLNTIISAATGSTFSRLQHRQVRIMTAGAAPPATVLAKIEALGFHVTHVYGLTETYGPC 359
Query: 342 VSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGG 401
C W P+W+ L E+A LKARQGV+ +GL + +++ ET V +DG T GE+ MRG
Sbjct: 360 TVCEWNPEWDNLSPDEQARLKARQGVKYVGLDGLQVLNSETLEPVAKDGVTIGEVCMRGN 419
Query: 402 SLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIES 461
+ GYL +PEAT + + G +++GD+ + HPDGY+EIKDR+KD+IISGGENISS E+ES
Sbjct: 420 MVFKGYLNNPEATLESFRGGWFHSGDLAVWHPDGYIEIKDRAKDIIISGGENISSLEVES 479
Query: 462 VLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMV 521
+LY HP V EAAVV RPD W E PCAFVSLK G S E++I+ +CR +P++MV
Sbjct: 480 ILYRHPAVLEAAVVARPDEKWGESPCAFVSLKYGVRS-----NEEEILSFCRQHLPKFMV 534
Query: 522 PKTVVFIDELPKTATGKVQKYVLGDIANSM 551
PK+VV + L KTATGK+QK VL A ++
Sbjct: 535 PKSVVILAALDKTATGKIQKQVLRSKARAL 564
>gi|357120831|ref|XP_003562128.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Brachypodium
distachyon]
Length = 568
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/560 (46%), Positives = 357/560 (63%), Gaps = 37/560 (6%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDT-TYTWSQTYRRCLQLASSLSS-FGINPGHV 66
AN PLTP+ FIERAA +++Y +T TW +T RC+++A++L++ + G V
Sbjct: 18 ANYAPLTPISFIERAAVVYGGRAAVVYGETRQQTWKETRERCVRVAAALATRLAVARGDV 77
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V+V++ N+PAMYELHFAVPM+GA+ T+NTR DA +S +L+HS +K+ FV+ S LL
Sbjct: 78 VAVLSRNVPAMYELHFAVPMAGAVLCTLNTRHDAAMVSTLLEHSGAKVFFVE----SSLL 133
Query: 127 EVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIP-------------PADFVDTYENML 173
+V L + D K + + S P +P + YE ++
Sbjct: 134 DV--------GRAALKRLADSK--TGAGSLPVLVPISDDGASSGDDDDGSSCTADYEGLI 183
Query: 174 AKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVL 233
F P ++LDP+ LNYT GTTS PKGVV ++ ++ V +++ + + +
Sbjct: 184 ENAPSGFDIRWPLNELDPIALNYTSGTTSRPKGVVYSHRGAYLNTVATVLAYDITAMATY 243
Query: 234 LWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSS 293
LWT+PMFH NGW+ WG A+ G TN+CLR+F A +F I H V+HM GAP VLN++ +
Sbjct: 244 LWTVPMFHGNGWNLPWGVAMQGGTNICLRRFTAKVIFDNIVLHRVSHMGGAPTVLNMIIN 303
Query: 294 SPEA--KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWN 351
+P A K L PVR++TAG+PPP V++ E LGF+V YG TE G C W P+W+
Sbjct: 304 APTADRKPLPGPVRVMTAGAPPPQRVIMGMEELGFMVYQMYGLTETYGPATVCTWMPEWD 363
Query: 352 KLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDP 411
LPA ERA LKARQG I + +VD+ +T SV DG+T GE++ RG ++M GY KD
Sbjct: 364 ALPAEERARLKARQGFHHIAMQDVDVKKLDTMESVPSDGKTMGEVMFRGNTVMRGYYKDI 423
Query: 412 EATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNE 471
+AT + M G +TGD+ + +PDGY+++KDR+KD+IISGGENISS E+ESV++ HP V E
Sbjct: 424 DATKESMIGGWLHTGDLAVRNPDGYIQLKDRAKDIIISGGENISSIEVESVIFRHPAVLE 483
Query: 472 AAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDEL 531
AAVV RPD W E PCAFV LKTGT+S TE +II +CR R+P YM PKTVVF ++L
Sbjct: 484 AAVVSRPDDHWGETPCAFVKLKTGTNS-----TEAEIIDFCRERLPHYMAPKTVVF-EDL 537
Query: 532 PKTATGKVQKYVLGDIANSM 551
PKT+TGK QK+VL + A M
Sbjct: 538 PKTSTGKTQKFVLRERARVM 557
>gi|192291495|ref|YP_001992100.1| acyl-CoA synthetase [Rhodopseudomonas palustris TIE-1]
gi|192285244|gb|ACF01625.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
TIE-1]
Length = 549
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/549 (46%), Positives = 343/549 (62%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PL+PL F+ER A + S++Y YTW +T RC + AS L+ GI
Sbjct: 12 LDKTPANFVPLSPLSFLERTANVYPEMTSVVYEGRHYTWKETRARCRRFASWLTRSGIGR 71
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PN+PAM E+HFAVPM+GA+ N +N RLDA I+ L H +K++ VD SS
Sbjct: 72 GDTVAVMLPNVPAMVEVHFAVPMAGAVLNALNIRLDAAAIAFQLDHGGAKIILVDPEFSS 131
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ E + L +K LV+ DDK S RI + YE +A GDP F+
Sbjct: 132 VVAEALKLM---TKPKPLVIDVDDKMYPGSH----RIGELE----YEYAVASGDPTFAGH 180
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
RP+ + D + L YT GTT PKGVV ++ ++ AV +++ + + V LWTLPMFH N
Sbjct: 181 RPEEEWDAISLGYTSGTTGNPKGVVTHHRGAYLNAVSNILAGNLGQHPVYLWTLPMFHCN 240
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W A NVCLRK D +F LI KHGVTHMCGAPIV N L ++PEA +
Sbjct: 241 GWCFPWTLAAAAGINVCLRKVDPAKIFELIPKHGVTHMCGAPIVYNALINAPEAPKGAAT 300
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+PV L AG+ PP VL E++G ++H YG TE+ G CA +P W++LP ERA L
Sbjct: 301 KPVVGLIAGAAPPMAVLAGAETIGIKLTHVYGLTEVYGPASVCAEQPGWDELPVAERAKL 360
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K RQGV V +++PET V RDG+T GE++ RG +M GYLK+ +AT + + G
Sbjct: 361 KRRQGVPYPMQEAVTVLNPETMQEVPRDGETIGEVMFRGNIVMKGYLKNEKATKEALAGG 420
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++ DGY+ IKDRSKD+IISGGEN+SS E+E VLY HP + AAVV +PDP
Sbjct: 421 WFHTGDLGVLDADGYVIIKDRSKDIIISGGENVSSVEVEDVLYKHPAILFAAVVAKPDPK 480
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK G + TE +II YCR +P + PK++VF +PKT+TGK+QK
Sbjct: 481 WGEVPCAFVELKDGASA-----TEAEIIAYCREHLPGFKTPKSIVF-SAIPKTSTGKIQK 534
Query: 542 YVLGDIANS 550
++L D S
Sbjct: 535 FMLRDQVKS 543
>gi|395652300|ref|ZP_10440150.1| acyl-CoA synthetase [Pseudomonas extremaustralis 14-3 substr.
14-3b]
Length = 540
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 247/550 (44%), Positives = 338/550 (61%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+P N L+PL FIER A+ D P++I+ TW+QTY RC +LAS+L+ GI
Sbjct: 8 LEPTNVNHIALSPLSFIERTASVYPDYPAVIHGSIRATWAQTYSRCRRLASALAGRGIGK 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V+V+ PNIPAM E HF VPM GA+ N +N RLDA I+ +L H E+K++ D
Sbjct: 68 NDTVAVMLPNIPAMLEAHFGVPMIGAVLNALNVRLDAEAIAFMLAHGEAKVLIADREFHD 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + P LV+ DD E P +D YE LA+GDP F+W
Sbjct: 128 VVHAAIGML----DHPPLVIDVDDPEYGEGQ------PVSDL--DYEAFLAEGDPDFAWQ 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + LNYT GTT PKGVV ++ ++ ++ + + W V V LWTLPMFH N
Sbjct: 176 WPEDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNQMIWAVGNHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + +V LR+ D + LI +H VTH+CGAPIVLN L + P++ + +D
Sbjct: 236 GWCYPWIITALAGVHVFLRRVDPQKILNLIHEHQVTHLCGAPIVLNALVNMPDSAKAAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA V+ E +G V H YG TE+ G CAW +W++LP ERA +
Sbjct: 296 HPVNAMVAGAAPPAKVIGAVEEMGIKVIHVYGLTEVYGPVTLCAWHSEWDELPLDERAQI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L V + DP+T DG T GEI MRG ++M GYLK+P AT++ + G
Sbjct: 356 KARQGVRYPTLEGVMVADPKTLEPTPHDGHTIGEIFMRGNTVMKGYLKNPTATAEAFEGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + HPDGY+EI+DR KD+IISGGENIS+ E+E VLY HP + EAAVV RPD
Sbjct: 416 WFHTGDLAVTHPDGYVEIRDRLKDIIISGGENISTIELEGVLYRHPAILEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+LK + E D+I +CR + + VP+TVVF +LPKT+TGK+QK
Sbjct: 476 WGETPCAFVTLKADHQN----IREADVISFCREHLAGFKVPRTVVFT-QLPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
++L D+A +
Sbjct: 531 FMLRDMAKKL 540
>gi|319794296|ref|YP_004155936.1| AMP-dependent synthetase and ligase [Variovorax paradoxus EPS]
gi|315596759|gb|ADU37825.1| AMP-dependent synthetase and ligase [Variovorax paradoxus EPS]
Length = 550
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/547 (44%), Positives = 344/547 (62%), Gaps = 17/547 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN PLTPLGF++RAA A + ++++ D + TW++T RC +LAS+L GI
Sbjct: 10 LERCAANHVPLTPLGFLDRAALAHPNRVAVVHGDLSRTWAETRERCHRLASALMMRGIEA 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VSV+APN PAM E HF +P++GA+ N IN RLDA I+ IL+H E KL+ VD ++
Sbjct: 70 GDTVSVLAPNTPAMLEAHFGIPLAGAVLNAINHRLDAEGIAFILRHGECKLLLVDREFAA 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ + L P ++ I D PP P + YE++LA GDP+F+
Sbjct: 130 TVAAALKLL---DHAPAVIDINDHLA-------PPGEPIGE--TDYESLLANGDPEFAGR 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + P+ LNYT GTT PKGVV ++ +++++ + +W +P+ LWTLPMFH N
Sbjct: 178 WPGDEWQPIALNYTSGTTGDPKGVVASHRGTYLMSLLQITNWAMPRAPKYLWTLPMFHAN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW FTW T+VCLR+ A V I +H + H+C AP+V+ +L+ + + +L RP
Sbjct: 238 GWCFTWAVTASAGTHVCLRRVSAEAVLEAIDRHEIDHLCAAPVVMAMLADAAKDTRLPRP 297
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
VR+LTAGSPPP VL ++GF V H +G TE++G VSCAW+ W+ L E+ +L+
Sbjct: 298 VRVLTAGSPPPLAVLNAVLAMGFDVEHVFGITEVSGTPVSCAWQDGWDDLAPAEQGALRV 357
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQGVR + + D +T V DG++ GE+++RG ++M+GY K+ AT K + DG +
Sbjct: 358 RQGVRAAMFEGLMVGDADTLEPVVPDGKSAGELMLRGNTVMMGYFKNEAATRKALADGWF 417
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
TGDV ++H +GY +I DRSKDVIISGGENISS EIE V++ HP V AAVV +PD W
Sbjct: 418 RTGDVAVLHANGYAQITDRSKDVIISGGENISSVEIEDVVHGHPAVLHAAVVAQPDEKWG 477
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E+PC F+ LKTG + TE++II +CR R+ + P+ V+F LPKTATGK+QK+
Sbjct: 478 EVPCVFIELKTGVAA----PTEQEIISFCRERLAHFKCPRRVIFT-PLPKTATGKIQKFR 532
Query: 544 LGDIANS 550
L + A S
Sbjct: 533 LREQAGS 539
>gi|83945302|ref|ZP_00957651.1| acyl-CoA synthase [Oceanicaulis sp. HTCC2633]
gi|83851472|gb|EAP89328.1| acyl-CoA synthase [Oceanicaulis sp. HTCC2633]
Length = 538
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 251/552 (45%), Positives = 350/552 (63%), Gaps = 24/552 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PL+P+ F+ R A A + ++I+ D W + Y R ++LAS+LS GI
Sbjct: 6 LDRNAANHVPLSPISFLTRTARAYPEKLAVIHGDIRRNWGEVYERSVRLASALSKRGIKK 65
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+APNIPA + HF VPMSGA+ N +N RLDA I+ ILKH E+K++ VD SS
Sbjct: 66 GDTVAVMAPNIPAFVDAHFGVPMSGAVLNALNIRLDAEAIAFILKHGEAKVILVDREFSS 125
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQFS 181
++ V P +V I D P + + YE L +GDP F
Sbjct: 126 VIARAVQEI---DAKPLIVDIDD-----------PLAEHGELIGEIEYEAFLKEGDPGFD 171
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
+ R + + D + LNYT GTT PKGVV ++ ++ AV + ++W +P V LWTLPMFH
Sbjct: 172 FHRAEDEWDAIALNYTSGTTGDPKGVVTHHRGAYLNAVGNAMEWDMPHFPVYLWTLPMFH 231
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A NVCLR+ + + + I +H VTH+CGAPIV++++ PE ++
Sbjct: 232 CNGWCFPWTLAAKAGVNVCLRRVEPFAILSAIAEHKVTHLCGAPIVMSMMIQLPEKERPD 291
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
D PV ++TAG+ PPA V+ E++G V+H YG TE+ G +++CAWKP+W++LP ++RA
Sbjct: 292 FDHPVAMMTAGASPPATVIAGMEAMGVTVTHTYGLTEVYGPSIACAWKPEWDELPLKDRA 351
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKARQG+ I ++ + +PET + DG++ GEI++RG ++M GYLK+P T K K
Sbjct: 352 RLKARQGLPYITQEDLMVANPETMEPLPWDGKSLGEIMIRGNAVMKGYLKNPATTQKSFK 411
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+ + HPDG++EIKDRSKD+IISGGENISS E+E VLYSHP V AAVV +PD
Sbjct: 412 GGWFHTGDLAVTHPDGHVEIKDRSKDIIISGGENISSVEVEDVLYSHPDVAAAAVVAKPD 471
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E PCAF+ LKTG + T+KDII + R + + P+ VVF ELPKTATGK+
Sbjct: 472 AKWGETPCAFIELKTGAN-----VTDKDIIAFAREHLAHFKAPRLVVF-GELPKTATGKI 525
Query: 540 QKYVLGDIANSM 551
QK++L + A M
Sbjct: 526 QKFMLRERAREM 537
>gi|89093400|ref|ZP_01166349.1| AMP-binding protein [Neptuniibacter caesariensis]
gi|89082379|gb|EAR61602.1| AMP-binding protein [Oceanospirillum sp. MED92]
Length = 549
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/553 (44%), Positives = 349/553 (63%), Gaps = 22/553 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN LTP+ FIERAA+ + + ++ D TW++TY RC Q AS+L + G+NP
Sbjct: 12 LDQNQANYSALTPITFIERAASVYPNRIATVHGDVRRTWAETYTRCKQFASALRAKGVNP 71
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS++APN+ +E HFAVPM GA+ N+IN RLD+ ++ ILKH+ESK++ D SS
Sbjct: 72 GDAVSIMAPNLAEHFEAHFAVPMCGAVLNSINIRLDSEAVAFILKHAESKVLITDREFSS 131
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQFS 181
++ + L + P ++ I D P +F+ Y++ LA GD F
Sbjct: 132 VVKGALELL---DEKPFVIDIDD-----------PYWSEGEFIGETKYDDFLATGDEHFV 177
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
+ + + + LNYT GTT PKGVV ++ ++ A+ + I W + + +V LWTLPMFH
Sbjct: 178 PHKVADEWNAITLNYTSGTTGNPKGVVYHHRGAYLNAISNSISWGMDQHAVYLWTLPMFH 237
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A + NVCLR A +F I++ V + CGAPIVLN+L+S+ + +
Sbjct: 238 CNGWCFPWTIAAMAGVNVCLRHVRADDIFNAIKREKVGYFCGAPIVLNMLNSADDELKTG 297
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
++ V+++TAG+ PPA V+ ESLGF V+H YG TE G +V CAW +W++ ++A
Sbjct: 298 IEHQVKVMTAGAAPPAAVIAGMESLGFSVTHVYGLTETYGPSVVCAWHDEWDEKSLDDKA 357
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKARQGVR L + + DP T V +DG+T GEI M+G +M GYLK+P+ T K +
Sbjct: 358 RLKARQGVRAPMLDGLMVADPVTMKPVPKDGETMGEIFMQGNLVMKGYLKNPDTTEKSFE 417
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+ + H DGY+EIKDRSKD+IISGGENISS E+E VLY HP+V EAAVV +
Sbjct: 418 GGWFHSGDLAVWHEDGYIEIKDRSKDIIISGGENISSIEVEDVLYRHPLVQEAAVVAKNH 477
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E PCAFV+LK G+D TEK+II +CR + + PK +VF D LPKT+TGK+
Sbjct: 478 EKWGETPCAFVALKEGSDRD---ITEKEIIDFCREHMAHFKAPKDIVFGD-LPKTSTGKI 533
Query: 540 QKYVLGDIANSMS 552
QK++L D AN +
Sbjct: 534 QKFLLRDRANGVE 546
>gi|414173434|ref|ZP_11428197.1| hypothetical protein HMPREF9695_01843 [Afipia broomeae ATCC 49717]
gi|410892086|gb|EKS39882.1| hypothetical protein HMPREF9695_01843 [Afipia broomeae ATCC 49717]
Length = 549
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/550 (46%), Positives = 343/550 (62%), Gaps = 21/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PL+PL F+ R+A+ D S +Y +TW+QTY RC + AS L+ GI
Sbjct: 12 LNKNAANYVPLSPLSFLARSASVYPDHTSAVYEGRRFTWAQTYERCKRFASFLAKRGIQR 71
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM E HFAVPM+G + N +N RLDA +I+ L H ++++ VD
Sbjct: 72 GDTVAAMLPNIPAMNEAHFAVPMAGGVLNALNIRLDAASIAFQLDHGGARIILVDPEFGG 131
Query: 124 LLLEVVSLFPPHSKTPK-LVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ + + L K PK LV+ DD + RI + YE +A GDP+F+W
Sbjct: 132 VISDALGLM----KGPKPLVIDVDDAAFAGGK----RIGELE----YEAAVASGDPEFAW 179
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
+ P + D + L YT GTT PKGVV Y+ ++ AV +++ + + LWTLPMFH
Sbjct: 180 LTPDDEWDAIALGYTSGTTGNPKGVVTHYRGAYLNAVSNILAGNLGTHPIYLWTLPMFHC 239
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQL 300
NGW F W A NVCLRK D +F LI+ HGVTHMCGAPIV N L ++P+A +
Sbjct: 240 NGWCFPWTIAASAGVNVCLRKVDPAKIFELIKIHGVTHMCGAPIVYNTLINAPDAPKSKS 299
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
+PV L AG+ PP VL E +G ++H YG TE+ G CA +P W++LPA +RA
Sbjct: 300 AKPVVGLIAGAAPPVAVLEGAEGIGIKLTHVYGLTEVYGPASVCAEQPGWDELPADQRAQ 359
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
LK RQGV V ++DPET V RDG+T GE++ RG +M GYLK+ +AT + +
Sbjct: 360 LKRRQGVPYPLQEAVTVLDPETMREVPRDGETIGEVMFRGNIVMKGYLKNEKATREAFEG 419
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+G++ DGY+ IKDRSKD+IISGGENISS E+E VLY HP V AAVV +PDP
Sbjct: 420 GWFHTGDLGVLDKDGYVIIKDRSKDIIISGGENISSVEVEDVLYKHPAVLFAAVVAKPDP 479
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV LK G + TE +I+ YC++ +P + PK+VVF +PKT+TGK+Q
Sbjct: 480 KWGEVPCAFVELKDGATA-----TEAEILSYCKSILPGFKSPKSVVF-GAIPKTSTGKIQ 533
Query: 541 KYVLGDIANS 550
K+ L D ANS
Sbjct: 534 KFALRDQANS 543
>gi|347535080|ref|YP_004842505.1| putative AMP-dependent synthetase and ligase [Flavobacterium
branchiophilum FL-15]
gi|345528238|emb|CCB68268.1| Protein of unknown function. Putative AMP-dependent synthetase and
ligase [Flavobacterium branchiophilum FL-15]
Length = 543
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/543 (46%), Positives = 350/543 (64%), Gaps = 20/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN L+PL FI+R A D +++Y TWS+TY RC++LAS+LS GI
Sbjct: 11 LDQNPANFTALSPLSFIKRTAFVYPDYTAVVYGKIRRTWSETYTRCMKLASALSKHGIKK 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS++APN+PA++E HF VPM+GA+ NT+N RLDA TI +L+H+ +K++ D S+
Sbjct: 71 GDTVSIMAPNVPAIFEAHFGVPMTGAVLNTLNIRLDAATIGFMLEHAGTKVLITDIEFSA 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+LE ++ + P L++ +D+ S D TYEN +A+GD F W
Sbjct: 131 TILEAIACL----EDPPLIINIEDEHAEGGSLI------GDL--TYENFIARGDDVFEWE 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P S+ + LNYT GTT PKGVV ++ ++ A +++I W +P+ +V LWTLPMFH N
Sbjct: 179 LPSSEWQAISLNYTSGTTGNPKGVVYHHRGAYLNAANNIITWSMPQHAVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW F W A T++C+RK A +F I VTH CGAPIVL LL+++ EA K L
Sbjct: 239 GWCFPWTLAAQAGTSICIRKVKADVIFEAIENEKVTHFCGAPIVLGLLTNASEADKKPLQ 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V ++TAG+ PPA ++ E++GF ++H YG TE G V CAW+ +W+ LP E+A L
Sbjct: 299 NTVYVMTAGAAPPAAIIEGVEAMGFKITHVYGLTETYGPAVVCAWQSEWDDLPISEKADL 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGV+ + L +V + +P+T V DG T GEI ++G +M GYLK+ AT + G
Sbjct: 359 KARQGVKYLFLEDVMVANPDTLEPVPADGTTIGEIFIKGNIVMKGYLKNEPATQEAFAGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + + DGY++IKDRSKD+IISGGENIS+ E+ESVLY HP V EAAVV RPD
Sbjct: 419 WFHTGDLAVWYADGYVQIKDRSKDIIISGGENISTIEVESVLYRHPAVLEAAVVARPDQK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E CAF++LK + TE ++IQYC+ + + PKTV+F ELPKT+TGK+QK
Sbjct: 479 WGETVCAFITLKP-----NQLLTELEVIQYCKQHLAGFKTPKTVIF-SELPKTSTGKIQK 532
Query: 542 YVL 544
YVL
Sbjct: 533 YVL 535
>gi|226508348|ref|NP_001147480.1| LOC100281089 [Zea mays]
gi|195611660|gb|ACG27660.1| AMP-binding protein [Zea mays]
gi|238011192|gb|ACR36631.1| unknown [Zea mays]
gi|413955967|gb|AFW88616.1| putative AMP-dependent synthetase and ligase superfamily protein
[Zea mays]
Length = 582
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 253/568 (44%), Positives = 353/568 (62%), Gaps = 14/568 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL F+ERAA A S+++ YTW+ TYRRC +LAS+L+
Sbjct: 19 IDDLPRNDANYTALTPLWFLERAALAHPGRASVVHGPVRYTWADTYRRCRRLASALARLS 78
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ G V+VIAPN+PA+YE HF VPMSGA+ N +N RL+A TI+ +L+HS +++V VD
Sbjct: 79 VGHGSTVAVIAPNVPAVYEAHFGVPMSGAVVNCVNIRLNAETIAFLLEHSVAEVVMVDQE 138
Query: 121 SSSLLLEVVSLFPPHS----KTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG 176
+L E + + + P ++++ D S + YE L G
Sbjct: 139 FCTLAEESLKIIGKKKTSAFRRPPILIVIGDPTCDPKSL---QHALGKGAIEYEEFLKTG 195
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
DP+FSW PK + + L YT GTTS+PKGVV ++ +++A+ I W +P+ +V LWT
Sbjct: 196 DPEFSWKPPKDEWQSIALGYTSGTTSSPKGVVLHHRGAYLMALSVAIVWGMPEGAVYLWT 255
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
LPMFH NGW +TW A T++CLR+ ++ I K GVTH C AP+VLN L ++P
Sbjct: 256 LPMFHCNGWCYTWALAAFCGTSICLRQVSTKAIYEGITKQGVTHFCAAPVVLNNLINAPA 315
Query: 297 AKQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKL 353
++ L R V + AG+ P +L GF V+H YG +E G + CAWKP+W++L
Sbjct: 316 SETFLPLPRVVSVNVAGAAPTPSLLGALSIRGFRVTHTYGLSETYGPSTVCAWKPEWDEL 375
Query: 354 PARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
P ER+ L RQGVR I + +D+VDP+T V DG++ GEIV+RG ++M GYLK+P A
Sbjct: 376 PLEERSRLHCRQGVRYIAMEGLDVVDPKTMAPVPADGKSYGEIVLRGNAVMKGYLKNPRA 435
Query: 414 TSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
++ G Y++GD+G+ HPDGY+E++DR KDVIISGGENISS E+E VL +HP V E +
Sbjct: 436 NAEAFAGGWYHSGDLGVKHPDGYVEVRDRMKDVIISGGENISSLEVEKVLCAHPAVLEVS 495
Query: 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGM--MTTEKDIIQYCRARIPRYMVPKTVVFIDEL 531
VV R D W E PCAFV+LK G + G DI+++CR R+P Y VPK+V+F L
Sbjct: 496 VVARADERWGESPCAFVTLKDGAAADGSDEAALANDIMRFCRERMPGYWVPKSVIF-GPL 554
Query: 532 PKTATGKVQKYVLGDIANSMS-MSHSRM 558
PKTATGK++K+ L A + + SRM
Sbjct: 555 PKTATGKIKKHELRARAKELGPVKKSRM 582
>gi|365896698|ref|ZP_09434760.1| putative AMP-binding enzyme [Bradyrhizobium sp. STM 3843]
gi|365422552|emb|CCE07302.1| putative AMP-binding enzyme [Bradyrhizobium sp. STM 3843]
Length = 547
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/544 (47%), Positives = 342/544 (62%), Gaps = 21/544 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PLTPL F+ R+A D S +Y ++TW+QTY RC Q AS L++ GI
Sbjct: 10 LDKTPANYVPLTPLSFLARSAAVYPDHVSTVYEGKSFTWAQTYTRCRQFASYLAARGIGE 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM ELHFAVPM+GA+ NT+N RLDA +I+ L H +K++ VD S
Sbjct: 70 GATVAAMLPNIPAMNELHFAVPMAGAVLNTLNIRLDAPSIAFQLDHGGAKIILVDPEFSG 129
Query: 124 LLLEVVSLFPPHSKTPK-LVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ E + L PK V+ DD S RI + YE LA GDP F
Sbjct: 130 VITEALKLM----TGPKPFVIDVDDAAFKGGS----RIGEIE----YEAALALGDPAFEP 177
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
RP + D + L+YT GTT PKGVV ++ ++ AV +++ + + V LWTLPMFH
Sbjct: 178 RRPNDEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGNLGQHPVYLWTLPMFHC 237
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQL 300
NGW F W A NVCLRK + +F LIR+HGVTHMCGAPIV N+L ++P+A +
Sbjct: 238 NGWCFPWTIAAAAGINVCLRKVEPTKIFELIREHGVTHMCGAPIVYNVLINAPDAPKGKR 297
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
++PV L AG+ PP VL E++G ++H YG TE+ G CA +P W+ L A ERA
Sbjct: 298 EKPVVGLIAGAAPPVAVLEGAENIGIKLTHVYGLTEVYGPASVCAEQPGWDDLSAAERAR 357
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
+K RQGV V ++DPET V RDG+T GE++ RG +M GYLK+ +AT++
Sbjct: 358 MKRRQGVPYPLEEAVTVLDPETMREVPRDGETIGEVMFRGNIVMKGYLKNEKATTEAFAG 417
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+G++ GY+ IKDRSKD+IISGGEN+SS E+E +LY HP V AAVV +PDP
Sbjct: 418 GWFHTGDLGVLDAHGYVIIKDRSKDIIISGGENVSSVEVEDILYKHPAVLFAAVVAKPDP 477
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAF+ LK G ++ TE +II YCR R+ + PK VVF +PKT+TGK+Q
Sbjct: 478 KWGEVPCAFIELKEGAEA-----TEAEIIAYCRERMSGFKTPKVVVF-GPIPKTSTGKIQ 531
Query: 541 KYVL 544
KY+L
Sbjct: 532 KYLL 535
>gi|242037047|ref|XP_002465918.1| hypothetical protein SORBIDRAFT_01g048090 [Sorghum bicolor]
gi|241919772|gb|EER92916.1| hypothetical protein SORBIDRAFT_01g048090 [Sorghum bicolor]
Length = 554
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/554 (46%), Positives = 346/554 (62%), Gaps = 14/554 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD AN PLTPL F+ERAA D +++ ++W +T RCL AS+L+ G
Sbjct: 1 MDGSMWGAANYVPLTPLSFLERAAIVYGDRTAVVCGGRRFSWRETRERCLAGASALAHLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
++ VV+VIA N+PAMYELHF+VPM+G + T+NTR DA +S++LKHSE+K+ V+
Sbjct: 61 VDRRDVVAVIASNVPAMYELHFSVPMTGGVLCTLNTRHDAAMVSVLLKHSEAKVFLVESQ 120
Query: 121 SSSLLLEVVSLFP-PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
++ + + L SK P ++ I+D + SS V YE +L
Sbjct: 121 FLAVARDALRLLADAKSKLPLVITISDAAASTGGSSSND-----GTVMEYEALLRSATRG 175
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F P +L+P+ LNYT GTTS PKGV+ ++ F+ ++ +++ + V LWT+PM
Sbjct: 176 FDIRWPDDELEPISLNYTSGTTSRPKGVIYSHRGAFLNSLATVLGNEMVTMPVYLWTVPM 235
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW W A G T+VC+ +F I +HGVT+M GAP VLN++ ++P A+Q
Sbjct: 236 FHCNGWCMVWATAAQGGTSVCIGSVIPRVIFDHIVRHGVTNMGGAPTVLNMIVNAPAAEQ 295
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
L R VRI T G+PPP VL + + LGF V HGYG TE G C WKP+WN LP E
Sbjct: 296 KPLPRRVRISTGGAPPPPQVLAKMDELGFDVVHGYGLTETYGPATVCVWKPEWNALPPLE 355
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
RA +KA QGV L EV I DP T ++ DG GE+++RG ++M GY KD AT +
Sbjct: 356 RARIKALQGVAHTMLQEVAIKDPATMETLPSDGCAVGEVMLRGNTVMSGYYKDAAATEEA 415
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
++ G TGD+G+ H DGY++IKDRSKD+IISGGENISS E+ESVL+ HP V +AAVV R
Sbjct: 416 VRGGWLRTGDLGVRHRDGYIQIKDRSKDIIISGGENISSIEVESVLFGHPAVLDAAVVAR 475
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD W E PCAFV+LK G + T DII +CRAR+P YM P+TVVF D LPKT+TG
Sbjct: 476 PDDHWGETPCAFVTLKNGATA-----TADDIIGFCRARLPHYMAPRTVVFSD-LPKTSTG 529
Query: 538 KVQKYVLGDIANSM 551
K QKY+L + A +M
Sbjct: 530 KTQKYLLREKATAM 543
>gi|330809084|ref|YP_004353546.1| acid--thiol ligase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423696754|ref|ZP_17671244.1| AMP-binding domain protein [Pseudomonas fluorescens Q8r1-96]
gi|327377192|gb|AEA68542.1| putative acid--thiol ligase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388004112|gb|EIK65439.1| AMP-binding domain protein [Pseudomonas fluorescens Q8r1-96]
Length = 540
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/550 (44%), Positives = 336/550 (61%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N LTPL FIER A+ D P++I+ TW+ TY RC +LAS+L+ GI
Sbjct: 8 LAPTGVNHIALTPLSFIERTASVYPDYPAVIHGSIRRTWADTYSRCRRLASALAGRGIGK 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V+V+ PNIPAM E HF VPM GA+ N +N RLDA I+ +L H E+K++ D
Sbjct: 68 NDTVAVMLPNIPAMLEAHFGVPMIGAVLNALNVRLDAEAIAFMLAHGEAKVLIADREFHD 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + P LV+ DD E A+ YE LA+GDP F+W
Sbjct: 128 VVQAAIGML----DHPPLVIDLDDPEYGEGQ--------ANSELDYEAFLAEGDPNFAWQ 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ ++ ++ + + W + V LWTLPMFH N
Sbjct: 176 WPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNQMTWAMGNHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + +V LR+ D + LIR+H +TH+CGAPIVLN L + P++ + +D
Sbjct: 236 GWCYPWTVTALAGVHVFLRRVDPQKILNLIREHQITHLCGAPIVLNALVNMPDSAKAAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA V+ E +G V+H YG TE+ G CAW W++LP +RA +
Sbjct: 296 HPVSAMVAGAAPPAKVIGAVEEMGIKVTHVYGLTEVYGPVTLCAWHAAWDELPLEQRAQI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L + + DP T DGQT GEI MRG ++M GYLK+P AT++ + G
Sbjct: 356 KARQGVRYPTLEGLMVADPRTLEPTPHDGQTIGEIFMRGNTVMKGYLKNPSATAEAFEGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + H DGY+EI+DR KD+IISGGENIS+ E+E VLY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVTHADGYVEIRDRLKDIIISGGENISTIELEGVLYRHPAVLEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK+ + E +II +CR + + VP+TVVF +LPKT+TGK+QK
Sbjct: 476 WGETPCAFITLKSDREE----VHEAEIISFCREHLAGFKVPRTVVFT-QLPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
+VL D+A ++
Sbjct: 531 FVLRDMAKNL 540
>gi|163854347|ref|YP_001628645.1| AMP-dependent synthetase/ligase [Bordetella petrii DSM 12804]
gi|163258075|emb|CAP40374.1| AMP-dependent synthetase and ligase family protein [Bordetella
petrii]
Length = 552
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 250/553 (45%), Positives = 352/553 (63%), Gaps = 20/553 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L N AN PLTPLGF++ AA P++++ + + +W T +RC Q+A++L ++G+
Sbjct: 7 DELPRNAANHVPLTPLGFLQWAAEVYPQRPALVHGNRSQSWRATQQRCRQMAAALRAWGV 66
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
G VV+V+APNIPA+YE HF VPM+GA+ N +NTRLDA T++ IL+H + ++ D
Sbjct: 67 QRGDVVAVLAPNIPALYEAHFGVPMAGAVLNALNTRLDAATLAFILEHGRATVLLFDSEY 126
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
+SL+ +V+ + P+ V I D + + + A+ YE LA P +
Sbjct: 127 ASLVQDVLGRL---AAPPRTVRIEDAEYTGEHGT----LGDAE----YETWLAAQPPDAA 175
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + + LNYT GTT PKGVV ++ ++ A +++ +P +V LWTLPMFH
Sbjct: 176 WDWPADEWQSICLNYTSGTTGNPKGVVYHHRGAYLNATGNVLACGMPPHAVYLWTLPMFH 235
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A + TNVCLR+ + +F IR++ V + C AP+VLN+L ++P Q
Sbjct: 236 CNGWCFPWTLAALAGTNVCLRRVEPAAIFDAIRRYRVGYFCAAPVVLNMLINAPSQVQHR 295
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
V+ LT G+ PPA V+ E LG V+H YG TE G +VSCAW +W++LP ERA
Sbjct: 296 ATHRVQALTGGAAPPAAVIEAMEQLGVGVTHLYGLTETYGPSVSCAWHDEWDELPLAERA 355
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+LKAR GVR + + V +VD V DG T GEIV+RG +LM GYL +P AT++
Sbjct: 356 ALKARIGVRKLNVEHVQVVDDRL-QPVPADGATLGEIVLRGNTLMKGYLHNPGATAEAFA 414
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+G++HPDGY+EIKDR+KD+IISGGENIS+ E+ESVLY HP + EAAVV RPD
Sbjct: 415 GGWFHSGDLGVVHPDGYIEIKDRAKDIIISGGENISTVEVESVLYRHPDILEAAVVARPD 474
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
P W E PCAFV+LK G T D++++CR + R+ VP+TVVF LPKTATGK+
Sbjct: 475 PTWGETPCAFVTLKDGAHC-----TADDVLRHCREHLARFKVPRTVVF-GPLPKTATGKI 528
Query: 540 QKYVLGDIANSMS 552
QK+VL A ++
Sbjct: 529 QKFVLRGQAAALG 541
>gi|260770299|ref|ZP_05879232.1| acyl-CoA synthase [Vibrio furnissii CIP 102972]
gi|260615637|gb|EEX40823.1| acyl-CoA synthase [Vibrio furnissii CIP 102972]
Length = 539
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/544 (45%), Positives = 338/544 (62%), Gaps = 20/544 (3%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
N LTPL F+ER A + P++I+ TW++TY+RC QLAS+L+ G+ G VSV
Sbjct: 14 NHIALTPLSFLERTAAIYPNYPAVIHGTIRRTWAETYQRCRQLASALAGRGVGKGDTVSV 73
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+ PNIPAM E HF VPM GA+ NT+N RLDA TI+ +L H E+K++ D ++ +
Sbjct: 74 MLPNIPAMLEAHFGVPMIGAVLNTLNIRLDAETIAFMLNHCEAKVLICDREFHDVIAHAL 133
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDL 189
+L TP LV+ DD E + YE LA+GDP + W P+ +
Sbjct: 134 ALM----DTPPLVIDVDDPEYGEGQATSEL--------DYETFLAEGDPAYEWQWPEDEW 181
Query: 190 DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249
+ LNYT GTT PKGVV ++ ++ ++ + + W + V LWTLPMFH NGW + W
Sbjct: 182 QAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNQMTWSMGNHPVYLWTLPMFHCNGWCYPW 241
Query: 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDRPVRIL 307
+ +V LR+ D + LIR+H V+H+CGAPIVLN L + PE + +D PV +
Sbjct: 242 TVTALAGVHVFLRRVDPQKILTLIREHQVSHLCGAPIVLNGLINMPEDAKAAIDHPVNAM 301
Query: 308 TAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AG+ PPA V+ E +G V+H YG TE+ G CAW W+ L ERA+LK+RQGV
Sbjct: 302 VAGAAPPAKVIGDIEKMGIKVTHVYGLTEVYGPVTVCAWHEAWDSLNLEERATLKSRQGV 361
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGD 427
R L V + D +T V +DG+T GEI MRG ++M GYLK+P+AT++ G ++TGD
Sbjct: 362 RYPTLEGVMVADIQTFQPVTKDGKTIGEIFMRGNTVMKGYLKNPDATAEAFDGGWFHTGD 421
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+G+ HP+GY+EIKDR KD+IISGGENIS+ E+E VLY HP + E +VV +PD W E PC
Sbjct: 422 LGVCHPNGYIEIKDRLKDIIISGGENISTIELEDVLYKHPAILEVSVVAKPDARWGESPC 481
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDI 547
AF++LK TE++II YC + + VPKT+VF + LPKT+TGKVQKYVL D
Sbjct: 482 AFITLKETE-----YATEQEIIDYCHEHLAGFKVPKTIVFAN-LPKTSTGKVQKYVLRDW 535
Query: 548 ANSM 551
A ++
Sbjct: 536 AKAI 539
>gi|365891345|ref|ZP_09429777.1| putative AMP-binding enzyme [Bradyrhizobium sp. STM 3809]
gi|365332722|emb|CCE02308.1| putative AMP-binding enzyme [Bradyrhizobium sp. STM 3809]
Length = 547
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/549 (46%), Positives = 342/549 (62%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PLTPL F+ R+A D S +Y ++TW QTY RC + AS L+ GI
Sbjct: 10 LDKNPANYVPLTPLSFLARSAAVYPDHVSTVYEGRSFTWRQTYERCRRFASYLAGRGIGT 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM E HFAVPM+GA+ NT+N RLDA +I+ L H ++K++ VD S
Sbjct: 70 GDTVAAMLPNIPAMNEAHFAVPMTGAVLNTLNIRLDASSIAFQLDHGQAKIILVDPEFSG 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ E + L S V+ DD S S RI + YE ++A GDP F
Sbjct: 130 VISEALKLM---SGPKPFVIDVDDASYSGGS----RIGEIE----YEAVVAAGDPSFEPR 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
RP + D + ++YT GTT PKGVV ++ ++ AV +++ + + V LWTLPMFH N
Sbjct: 179 RPADEWDAIAMSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGGLGQHPVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW F W A NVCLRK + +F LI+ HGVTHMCGAPIV N+L ++P+A + +
Sbjct: 239 GWCFPWTMAAAAGVNVCLRKVEPTKIFELIKTHGVTHMCGAPIVYNVLINAPDAPKGKRE 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+PV L AG+ PP VL ES+G ++H YG TE+ G CA +P W+ LPA ERA L
Sbjct: 299 KPVVGLIAGAAPPVAVLEGAESIGIKLTHVYGLTEVYGPASVCAEQPGWDDLPAPERARL 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K RQGV V +++PET V RDG+T GE++ RG +M GYLK+ +AT G
Sbjct: 359 KRRQGVPYPLQEAVTVLNPETMQEVPRDGETIGEVMFRGNIVMKGYLKNEKATQDAFAGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++ GY+ IKDRSKD+IISGGENISS E+E +LY HP V AAVV +PDP
Sbjct: 419 WFHTGDLGVLDEHGYVIIKDRSKDIIISGGENISSVEVEDILYKHPAVLFAAVVAKPDPK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK G + TE +II YCR+ + + PK VVF +PKT+TGK+QK
Sbjct: 479 WGEVPCAFVELKDGAQA-----TEAEIIAYCRSHMSGFKTPKVVVF-GPIPKTSTGKIQK 532
Query: 542 YVLGDIANS 550
++L + NS
Sbjct: 533 FLLRNEVNS 541
>gi|221068479|ref|ZP_03544584.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
gi|220713502|gb|EED68870.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
Length = 548
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/551 (46%), Positives = 340/551 (61%), Gaps = 17/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PN AN LTPLGFI R A + +I++ D W++TY RC QLASSL GI
Sbjct: 9 LTPNTANHAALTPLGFIARTAEVYPERLAIVHGDLRQNWARTYARCRQLASSLQKIGIGK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V+V+ PN P M E HF VPM+GA+ NT+NTRLDA T++ +L H E+K + VD +
Sbjct: 69 NDTVAVMLPNTPPMVEAHFGVPMAGAVLNTLNTRLDAETLAFMLDHGEAKALIVDPEFAP 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L+ + L S P V+ +D ++ +I D YE+ +A+GD F W
Sbjct: 129 LMARALKL--RQSTAPIYVIQVEDPVYGEAAE---QIGVTD----YESFVAQGDAGFDWQ 179
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ A+ ++++W +PK +V LWTLPMFH N
Sbjct: 180 WPGDEWDAIALNYTSGTTGNPKGVVYHHRGAHNNAISNVLEWDMPKHAVYLWTLPMFHCN 239
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW F W A A NVCLR+ DA +F IR HGV+H CGAPIV +LL ++P + P
Sbjct: 240 GWCFPWTVAARAAVNVCLRRVDAQAIFDAIRNHGVSHYCGAPIVHSLLVNAPAVMKQGVP 299
Query: 304 --VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ + AG+ PPA ++ E++GF ++H YG TE G CA WN L ERA L
Sbjct: 300 AGVKAMVAGAAPPASMIEGMEAMGFDITHVYGLTETYGPATVCAKHEGWNALDIGERARL 359
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
+RQGVR ++DPET V RDGQT GEI+ +G M GYLK+P+AT + + G
Sbjct: 360 NSRQGVRYHLQRSAAVLDPETMQPVPRDGQTMGEIMFQGNIAMKGYLKNPQATQEAFRGG 419
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+ + HPDGY++IKDRSKD+IISGGENISS E+E VLY HP V AAVV +PDP
Sbjct: 420 WFHSGDLAVQHPDGYIQIKDRSKDIIISGGENISSIEVEDVLYRHPAVLAAAVVAKPDPK 479
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF+ LK G + TT +DI+ +C+ + Y VP+ VVF ELPKT+TGK+QK
Sbjct: 480 WGETPCAFIELKAGAE-----TTAEDIMAHCKKHLAGYKVPRAVVF-GELPKTSTGKIQK 533
Query: 542 YVLGDIANSMS 552
+ L A S S
Sbjct: 534 FELRKQAGSAS 544
>gi|398878996|ref|ZP_10634099.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM67]
gi|398197542|gb|EJM84519.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM67]
Length = 540
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 247/550 (44%), Positives = 340/550 (61%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P+ N L+PL F+ER A D P++I+ TW+QTY RC +LAS+L+ GI
Sbjct: 8 LGPSAVNHIALSPLSFLERTANVYPDYPAVIHGSIRRTWAQTYTRCRRLASALAGRGIGK 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V+V+ PNIP M E+HF VPM GA+ N +N RLDA I+ +L+H E+K++ D +
Sbjct: 68 DDTVAVMLPNIPEMLEVHFGVPMIGAVLNPLNVRLDAEAIAFMLQHGEAKVLITDREFHN 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + P LV+ +D E + + D YE +LA+GDP F+W
Sbjct: 128 VIHAAIGML----DHPPLVIDVNDPEYGEGQA----VSDLD----YEALLAEGDPAFAWQ 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P ++ + LNYT GTT PKGVV ++ ++ A+ + + W + V LWTLPMFH N
Sbjct: 176 WPANEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAMGNHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + +V LR+ D + LIR+H VTH+CGAPIVLN L + PE+ + +D
Sbjct: 236 GWCYPWTITALAGVHVFLRRVDPQKILTLIREHQVTHLCGAPIVLNALVNMPESAKAAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA V+ E +G V+H YG TE G CAW +W++LP ERA +
Sbjct: 296 HPVNAMVAGAAPPAKVIGAVEEMGIKVTHVYGLTETYGPVTLCAWHAEWDELPLEERAQI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L V + D +T RDGQT GE+ MRG ++M GYLK+P AT++ + G
Sbjct: 356 KSRQGVRYPTLEGVMVGDSKTLEPTPRDGQTIGEVFMRGNTVMKGYLKNPTATAEAFEGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + HPDGY+EIKDR KD+IISGGENIS+ E+E VLY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVCHPDGYVEIKDRLKDIIISGGENISTIELEGVLYRHPGVMEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK E DII +CR + + VP+TV+F LPKT+TGK+QK
Sbjct: 476 WGETPCAFITLKADHQD----VREADIISFCREHLAGFKVPRTVIFT-LLPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL D A ++
Sbjct: 531 YVLRDRAKAL 540
>gi|108707722|gb|ABF95517.1| AMP-binding enzyme family protein, expressed [Oryza sativa Japonica
Group]
Length = 587
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/588 (43%), Positives = 359/588 (61%), Gaps = 37/588 (6%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L AN LTPL F+ERAA A S+++ YTW+ TYRRC +LAS+L
Sbjct: 7 IDDLPRGGANYTALTPLWFLERAALAHPARASVVHGPVRYTWADTYRRCRRLASALERRF 66
Query: 61 I--------------------NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDA 100
+ N + V+VIAPNIPA+YE HF VPM+GA+ N +N RL+A
Sbjct: 67 LPCYVSMETEWFFLLMLMGNGNLPNPVAVIAPNIPAVYEAHFGVPMAGAVVNCVNIRLNA 126
Query: 101 RTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK----TPKLVLITDDKEISSSSSP 156
T++ +L+HS +++V VD SL + + + K P L++I D +
Sbjct: 127 PTVAFLLEHSSAEVVMVDQEFFSLAEDSLRIIAEQKKGAFKQPLLIVIGDQ------TCD 180
Query: 157 PPRIPPA--DFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAF 214
P + A YE L GDP+F+W P+ + + L YT GTTS PKGVV ++
Sbjct: 181 PVSLKSALSKGAIEYEEFLETGDPEFAWKPPQDEWKSIALGYTSGTTSNPKGVVLHHRGA 240
Query: 215 FIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIR 274
+++++ + W + + +V LWTLPMFH NGW +TW A + T++CLR+ A +F+ I
Sbjct: 241 YLMSLSGALVWGMNEGAVYLWTLPMFHCNGWCYTWTLAALCGTSICLRQVTAKAIFSAIA 300
Query: 275 KHGVTHMCGAPIVLNLLSSSPEAKQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHG 331
GVTH CGAP+VLN + ++P A L R V ++TAG+ PP VL LGF ++H
Sbjct: 301 NQGVTHFCGAPVVLNTIVNAPPADAILPLPRVVNVMTAGAAPPPSVLASMSKLGFRITHT 360
Query: 332 YGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQ 391
YG +E G + CAWKP+W++LP ERA L ARQG+R +GL +D+VDP+T V DG
Sbjct: 361 YGLSETYGPSTVCAWKPEWDELPDDERARLHARQGIRYVGLEGLDVVDPKTMAPVPADGS 420
Query: 392 TRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGG 451
T GEIVMRG +M GYLK+P A ++ ++G +++GD+G+ H DGY+E+KDR+KD+IISGG
Sbjct: 421 TLGEIVMRGNGVMKGYLKNPRANAEAFENGWFHSGDLGVKHTDGYIEVKDRAKDIIISGG 480
Query: 452 ENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQY 511
ENISS E+E +Y HP V EA+VV R D W E PCAFV+ K G DS DI+++
Sbjct: 481 ENISSLEVEKAVYQHPAVLEASVVARADEQWGESPCAFVTPKDGADSSDEAALAGDIMRF 540
Query: 512 CRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMS-MSHSRM 558
CR R+P Y VPK+VVF LPKTATGK++K+ L A + + SRM
Sbjct: 541 CRERLPGYWVPKSVVF-GPLPKTATGKIKKHELRAKAKELGPVRKSRM 587
>gi|398882650|ref|ZP_10637616.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM60]
gi|398198317|gb|EJM85275.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM60]
Length = 540
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 247/550 (44%), Positives = 340/550 (61%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P+ N L+PL F+ER A D P++I+ TW+QTY RC +LAS+L+ GI
Sbjct: 8 LVPSAVNHIALSPLSFLERTANVYPDYPAVIHGSIRRTWAQTYTRCRRLASALAGRGIGK 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V+V+ PNIP M E+HF VPM GA+ N +N RLDA I+ +L+H E+K++ D +
Sbjct: 68 DDTVAVMLPNIPEMLEVHFGVPMIGAVLNPLNVRLDAEAIAFMLQHGEAKVLITDREFHN 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + P LV+ +D E + + D YE +LA+GDP F+W
Sbjct: 128 VIHAAIGML----DHPPLVIDVNDPEYGEGQA----VSDLD----YEALLAEGDPAFAWQ 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P ++ + LNYT GTT PKGVV ++ ++ A+ + + W + V LWTLPMFH N
Sbjct: 176 WPANEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAMGNHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + +V LR+ D + LIR+H VTH+CGAPIVLN L + PE+ + +D
Sbjct: 236 GWCYPWTITALAGVHVFLRRVDPQKILTLIREHQVTHLCGAPIVLNALVNMPESAKAAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA V+ E +G V+H YG TE G CAW +W++LP ERA +
Sbjct: 296 HPVNAMVAGAAPPAKVIGAVEEMGIKVTHVYGLTETYGPVTLCAWHAEWDELPLEERAQI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L V + D +T RDGQT GE+ MRG ++M GYLK+P AT++ + G
Sbjct: 356 KSRQGVRYPTLEGVMVGDSKTLEPTPRDGQTIGEVFMRGNTVMKGYLKNPTATAEAFESG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + HPDGY+EIKDR KD+IISGGENIS+ E+E VLY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVCHPDGYVEIKDRLKDIIISGGENISTIELEGVLYRHPGVMEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK E DII +CR + + VP+TV+F LPKT+TGK+QK
Sbjct: 476 WGETPCAFITLKADHQD----VREADIISFCREHLAGFKVPRTVIFT-LLPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL D A ++
Sbjct: 531 YVLRDRAKAL 540
>gi|374705361|ref|ZP_09712231.1| AMP-binding protein [Pseudomonas sp. S9]
Length = 544
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 256/548 (46%), Positives = 350/548 (63%), Gaps = 20/548 (3%)
Query: 7 NPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHV 66
+ AN L+PL F+ERAA + ++I TW +TY+RC++ AS+L+ G+ G
Sbjct: 14 DAANFQALSPLSFLERAAFVYPNKLALINGALRQTWGETYKRCVRFASALAQRGVGLGDT 73
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V+VIAPN AM+E HFAVPM GA+ N INTRLDA TI+ IL+H E+K++ VD S +
Sbjct: 74 VAVIAPNGQAMFEAHFAVPMCGAVLNAINTRLDAETIAFILQHGEAKVLLVDKEFSETVQ 133
Query: 127 EVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK 186
+ ++ P +V I D + + S I D YE +L +GDP +SW P
Sbjct: 134 RALGQM---AERPLVVGIDDAEYLEGS-----LIGELD----YEALLVEGDPDYSWSLPA 181
Query: 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
+ + LNYT GTT PKGVV ++ + A+ + + W + + V LWTLPMFH NGW
Sbjct: 182 DEWQAIALNYTSGTTGNPKGVVYHHRGAHLNALSNAMCWDMTRFPVCLWTLPMFHCNGWF 241
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP-EAKQLD-RPV 304
F W A T+VCLR A ++ + +HGV H CGAPIVLN+L+++P E K L +PV
Sbjct: 242 FPWALAAYIGTSVCLRHVRADAIYPALAEHGVDHFCGAPIVLNMLANAPAELKALKTQPV 301
Query: 305 RILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
+ LTAG+ PPA V+ E+L F V+H YG TE G +V+C WK +W++ ERA LK+R
Sbjct: 302 KFLTAGAAPPAAVIEAMEALDFKVTHVYGLTETYGPSVACEWKSEWDEASPEERAKLKSR 361
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYY 424
QGVR L E+ + DPET V +DG+T GEI MRG +M GYLK+P AT++ G ++
Sbjct: 362 QGVRAPLLDELMVADPETLQPVPKDGETIGEIFMRGNVVMKGYLKNPTATAEAFAGGWFH 421
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
+GD+ + H DGY+EIKDRSKD+IISGGENISS E+E +LY HP V EAAVV W E
Sbjct: 422 SGDLAVWHADGYVEIKDRSKDIIISGGENISSIELEGILYRHPHVLEAAVVAMDSEKWGE 481
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
PCAF++LK G +S TE+ ++++C+A + R+ VP VVF ELPKT+TGKVQK+VL
Sbjct: 482 TPCAFITLKPGAES-----TEESMLRFCQAHMARFKVPGKVVFC-ELPKTSTGKVQKFVL 535
Query: 545 GDIANSMS 552
+ A +S
Sbjct: 536 REQARKLS 543
>gi|375132193|ref|YP_005048601.1| acyl-CoA synthetase [Vibrio furnissii NCTC 11218]
gi|315181368|gb|ADT88281.1| acyl-CoA synthetase [Vibrio furnissii NCTC 11218]
Length = 539
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/544 (45%), Positives = 338/544 (62%), Gaps = 20/544 (3%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
N LTPL F+ER A + P++I+ TW++TY+RC QLAS+L+ G+ G VSV
Sbjct: 14 NHIALTPLSFLERTAAIYPNYPAVIHGTIRRTWAETYQRCRQLASALAGRGVGKGDTVSV 73
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+ PNIPAM E HF VPM GA+ NT+N RLDA TI+ +L H E+K++ D ++ +
Sbjct: 74 MLPNIPAMLEAHFGVPMIGAVLNTLNIRLDAETIAFMLNHCEAKVLICDREFHDVIAHAL 133
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDL 189
+L TP LV+ DD E + YE LA+GDP + W P+ +
Sbjct: 134 ALM----DTPPLVIDVDDPEYGEGQATSEL--------DYEAFLAEGDPAYEWQWPEDEW 181
Query: 190 DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249
+ LNYT GTT PKGVV ++ ++ ++ + + W + V LWTLPMFH NGW + W
Sbjct: 182 QAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNQMTWSMGNHPVYLWTLPMFHCNGWCYPW 241
Query: 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDRPVRIL 307
+ +V LR+ D + LIR+H V+H+CGAPIVLN L + PE + +D PV +
Sbjct: 242 TVTALAGVHVFLRRVDPQKILTLIREHQVSHLCGAPIVLNGLINMPEDAKAAIDHPVNAM 301
Query: 308 TAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AG+ PPA V+ E +G V+H YG TE+ G CAW W+ L ERA+LK+RQGV
Sbjct: 302 VAGAAPPAKVIGDIEKMGIKVTHVYGLTEVYGPVTVCAWHEAWDSLNLEERATLKSRQGV 361
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGD 427
R L V + D +T V +DG+T GEI MRG ++M GYLK+P+AT++ G ++TGD
Sbjct: 362 RYPTLEGVMVADIQTFQPVTKDGKTIGEIFMRGNTVMKGYLKNPDATAEAFDGGWFHTGD 421
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+G+ HP+GY+EIKDR KD+IISGGENIS+ E+E VLY HP + E +VV +PD W E PC
Sbjct: 422 LGVCHPNGYIEIKDRLKDIIISGGENISTIELEDVLYKHPAILEVSVVAKPDARWGESPC 481
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDI 547
AF++LK TE++II YC + + VPKT+VF + LPKT+TGKVQKYVL D
Sbjct: 482 AFITLKETE-----YATEQEIIDYCHEHLAGFKVPKTIVFAN-LPKTSTGKVQKYVLRDW 535
Query: 548 ANSM 551
A ++
Sbjct: 536 AKAI 539
>gi|414166869|ref|ZP_11423099.1| hypothetical protein HMPREF9696_00954 [Afipia clevelandensis ATCC
49720]
gi|410892147|gb|EKS39942.1| hypothetical protein HMPREF9696_00954 [Afipia clevelandensis ATCC
49720]
Length = 548
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 256/550 (46%), Positives = 341/550 (62%), Gaps = 21/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PL+PL F+ R+A+ D S +Y T+TW+QT+ RC + AS L++ GI
Sbjct: 11 LDKNAANYVPLSPLSFLVRSASVYPDHTSAVYEGRTFTWAQTFERCKRFASFLAARGIRR 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM ELHFAVPM+G + N +N RLDA I+ L H +K++ VD S
Sbjct: 71 GDTVAAMLPNIPAMNELHFAVPMAGGVLNALNIRLDAAAIAFQLDHGGAKIILVDPEFSG 130
Query: 124 LLLEVVSLFPPHSKTPK-LVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ + ++L K PK LV+ DD RI + YE +A GDP+F+W
Sbjct: 131 VITDALALM----KGPKPLVIDVDDAAFDGGK----RIGEIE----YEAAVASGDPEFTW 178
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
++P+ + D + L YT GTT PKGVV Y+ ++ AV +++ + + LWTLPMFH
Sbjct: 179 LKPEDEWDAIALGYTSGTTGNPKGVVTHYRGAYLNAVSNILAGGLGTHPIYLWTLPMFHC 238
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQL 300
NGW F W A NVCLRK D +F LI KHGVTHMCGAPIV N L ++P A +
Sbjct: 239 NGWCFPWTIAASAGVNVCLRKVDPAKIFELIPKHGVTHMCGAPIVYNTLINAPGAPKGKA 298
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
PV L AG+ PP VL ES+G ++H YG TE+ G CA +P W+ LPA +RA
Sbjct: 299 ATPVVGLIAGAAPPVAVLEGAESIGIKLTHVYGLTEVYGPASVCAEQPGWDDLPAEQRAQ 358
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
LK RQGV V ++DPET V RD +T GE++ RG +M GYLK+ AT + +
Sbjct: 359 LKRRQGVPYPLQEAVTVLDPETMQEVPRDAETIGEVMFRGNIVMKGYLKNEAATREAFEG 418
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+G++ GY+ IKDRSKD+IISGGENISS E+E VLY HP V AAVV +PDP
Sbjct: 419 GWFHTGDLGVLDEFGYVIIKDRSKDIIISGGENISSVEVEDVLYKHPAVLFAAVVAKPDP 478
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV LK G + TE +I+ YC++ +P + PK VVF +PKT+TGK+Q
Sbjct: 479 KWGEVPCAFVELKDGASA-----TEAEILAYCKSVLPGFKSPKAVVF-GAIPKTSTGKIQ 532
Query: 541 KYVLGDIANS 550
K+ L D NS
Sbjct: 533 KFALRDQVNS 542
>gi|399155937|ref|ZP_10756004.1| acyl-CoA synthetase [SAR324 cluster bacterium SCGC AAA001-C10]
Length = 540
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/556 (44%), Positives = 352/556 (63%), Gaps = 32/556 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PL+P+ F++R A S+IY +TW +TY RC +LAS+LS GI
Sbjct: 9 LPQNSANYTPLSPITFLKRTAFVHPHRTSVIYGKHRWTWVETYIRCCRLASALSKRGIGK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VSV+APNIPA++E HF V M+GA+ NT+N R++A T++ I +H+E+K++ D
Sbjct: 69 GDTVSVMAPNIPAIFEAHFGVLMTGAVLNTLNIRMEAETLANIFEHAETKVLLTDR---- 124
Query: 124 LLLEVVSLFP----PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD--TYENMLAKGD 177
FP SK + +L+ D + P +++ YE L++GD
Sbjct: 125 ------EFFPQIKVALSKVKRDILVIDIDD--------PETDSGEYLGMLEYEAFLSEGD 170
Query: 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
P+F V P+ D + LNYT GTT PKGVV + +++A +++ W +P + V LWTL
Sbjct: 171 PEFEAVLPEDDWQAVSLNYTSGTTGIPKGVVYHTRGAYLLATGNVLAWEMPHRPVYLWTL 230
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
PMFH NGW F W ++G T+VCLRK A ++ I +H VTH CGAPIV+N++S++P+
Sbjct: 231 PMFHCNGWCFPWTITMLGGTHVCLRKVTAKNIYNSIAEHHVTHFCGAPIVMNMISNAPKE 290
Query: 298 KQLDRP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
+Q + P V I+TA +PPP V+ + E GF V+H YG TE+ G V C W+ WN+
Sbjct: 291 EQRELPHRVEIMTAAAPPPPTVIAQMEEAGFNVTHVYGLTEVYGPAVVCEWQEAWNEKDK 350
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
+A LK RQGVR L + + +PET V DG+T GE++M+G +M GY K+P+AT+
Sbjct: 351 TTQAQLKGRQGVRYHVLEGLTVANPETLEPVPADGETMGEVLMQGNIVMKGYFKNPKATA 410
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
+ G +++GD+G++HPDGY+E+KDRSKD+IISGGENISS EIE+VLY + EAAVV
Sbjct: 411 QAFAGGWFHSGDIGVIHPDGYIELKDRSKDIIISGGENISSVEIENVLYQQEDILEAAVV 470
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
RPD W E+PCAFVSLKTG E+ +I++CR ++ + +PK VVF ELPKT+
Sbjct: 471 ARPDEKWGEVPCAFVSLKTGCS-----LNEQKVIEFCRTKLSGFKIPKYVVFC-ELPKTS 524
Query: 536 TGKVQKYVLGDIANSM 551
TGK++K +L + A +
Sbjct: 525 TGKIRKSILREQAKKL 540
>gi|89092343|ref|ZP_01165297.1| AMP-binding protein [Neptuniibacter caesariensis]
gi|89083431|gb|EAR62649.1| AMP-binding protein [Oceanospirillum sp. MED92]
Length = 542
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 243/551 (44%), Positives = 345/551 (62%), Gaps = 24/551 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN LTPL F+ERAA + + ++ D W++TY RC QL S+L GI
Sbjct: 12 LDQNQANFAALTPLSFVERAAFVYPEHTATVHGDVRRNWAETYTRCRQLGSALQKRGIGQ 71
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VSVIAPN+P ++E HF VPM+GA+ N +N RLDA I+ IL+H+ESK+V V+ S
Sbjct: 72 GDTVSVIAPNLPEVFESHFGVPMAGAVLNAVNIRLDAEAIAFILQHAESKVVIVEREFSD 131
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQFS 181
++ + + + + T LV+ DD P + + + YE +A+GDP+F+
Sbjct: 132 VVQKALRI----AGTSPLVIDIDD----------PTYEGGELIGSMDYEAFIAEGDPEFA 177
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + D + LNYT GTT PKGVV ++ ++ A+ +++ W + + LWTLPMFH
Sbjct: 178 WQPPADEWDAITLNYTSGTTGNPKGVVYHHRGAYLNAMSNIVSWDMGRHPNYLWTLPMFH 237
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A T+V LR ++ LIRK VTH CGAPIVLN+L+++P+ +
Sbjct: 238 CNGWCFPWSIAAAAGTSVSLRHVRDQDIYDLIRKEKVTHFCGAPIVLNMLNNAPDEMKAG 297
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
++ ++++TAG+ PPA V+ E +G V+H YG TE G +V CAW KW+ ++A
Sbjct: 298 IEHEIKVMTAGAAPPAAVIQGMEEMGIEVTHVYGLTETYGPSVVCAWHDKWDDNSLEDKA 357
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LK+RQGV+ L + + +PET V +DG+T GEI MRG +M GYLK+P T + +
Sbjct: 358 RLKSRQGVKAPMLEGLMVANPETLEPVPQDGETMGEIFMRGNLVMKGYLKNPSTTDESFE 417
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+ + H DGY+EIKDRSKD+IISGGENISS E+E VLY HP V EAAVV + D
Sbjct: 418 GGWFHSGDLAVWHEDGYIEIKDRSKDIIISGGENISSIEVEDVLYRHPAVMEAAVVAKSD 477
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+PCAF+ K G + T ++I ++CR + R+ PK +VF ELPKT+TGK+
Sbjct: 478 EKWGEVPCAFIKTKEGVE-----VTAEEIKEFCRNNMARFKAPKAIVF-GELPKTSTGKI 531
Query: 540 QKYVLGDIANS 550
QK+VL + A S
Sbjct: 532 QKFVLREKAES 542
>gi|402568162|ref|YP_006617506.1| medium-chain-fatty-acid--CoA ligase AlkK [Burkholderia cepacia GG4]
gi|402249359|gb|AFQ49812.1| medium-chain-fatty-acid--CoA ligase AlkK [Burkholderia cepacia GG4]
Length = 551
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 265/549 (48%), Positives = 342/549 (62%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PLTPL F++R A +I++ TW QT RC +LAS+L GI
Sbjct: 10 LDRNEANHMPLTPLHFLDRCAEQFPSRVAIVHGTLQQTWEQTRSRCRRLASALVQRGIGR 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VSV+APNIPA+ E HF VP+SGA+ NTIN RLDA IS IL+HSE K++ VD ++
Sbjct: 70 GDTVSVLAPNIPAVIEAHFGVPLSGAVLNTINCRLDAEGISFILRHSECKVLLVDRKFAN 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L + + P + P +V I D + + P P I + YE +LA+GD F+ V
Sbjct: 130 LACKALE---PLDEKPLVVDIADLE-----APPGPSIGQLE----YEALLAEGDSDFAGV 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTTS PKGVV ++ +++++ LIDW +P +V LWTLPMFH N
Sbjct: 178 WPVDEWDAIALNYTSGTTSDPKGVVASHRGTYLMSMLQLIDWCMPNGAVYLWTLPMFHAN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLD 301
GW FTW V T+VCLRK +FA I + GV H C APIVL++++S+P + K L
Sbjct: 238 GWCFTWAITAVCGTHVCLRKVTVENIFAAIHESGVDHFCAAPIVLSMMASAPAVDDKPLP 297
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
VRI TAGSPPPA VL GF V H YG TE G +VSC +P+W LP E+A L
Sbjct: 298 HLVRIRTAGSPPPATVLKTIGERGFKVDHVYGITESLGTSVSCTIRPEWESLPIEEQARL 357
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQG R GL + + DP T V DG+T GE+++RG LM GYLK+ AT G
Sbjct: 358 KARQGNRAAGLEGLRVADPVTLEPVPFDGKTHGELLLRGNVLMKGYLKNETATRDAFAGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ TGDV +MH DGY++I DRSKDVIISGGENISS E+E +L+ H V AAVV +PD
Sbjct: 418 WFRTGDVAVMHSDGYIQITDRSKDVIISGGENISSVEVEDILHRHAAVLAAAVVAQPDAR 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV L+ G M TE+++I++CR + Y P VV+ ELP+T TGKVQK
Sbjct: 478 WGEVPCAFVELR----PGAMAPTEQELIEFCRKHLAHYKCPARVVYC-ELPRTGTGKVQK 532
Query: 542 YVLGDIANS 550
+ L + A S
Sbjct: 533 FKLREQAGS 541
>gi|39935847|ref|NP_948123.1| acyl-CoA synthetase [Rhodopseudomonas palustris CGA009]
gi|39649701|emb|CAE28222.1| possible AMP-binding enzyme [Rhodopseudomonas palustris CGA009]
Length = 549
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 255/549 (46%), Positives = 343/549 (62%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PL+PL F+ER A + S++Y YTW +T RC + AS L+ GI
Sbjct: 12 LDKTPANFVPLSPLSFLERTANVYPEMTSVVYEGRHYTWKETRARCRRFASWLTRSGIGR 71
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PN+PAM E+HFAVPM+GA+ N +N RLDA I+ L H +K++ VD SS
Sbjct: 72 GDTVAVMLPNVPAMVEVHFAVPMAGAVLNALNIRLDAAAIAFQLDHGGAKIILVDPEFSS 131
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ E + L +K LV+ DDK S RI + YE +A GDP F+
Sbjct: 132 VVAEALKLM---TKPKPLVIDVDDKMYPGSH----RIGELE----YEYAVASGDPTFAGH 180
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
RP+ + D + L YT GTT PKGVV ++ ++ AV +++ + + V LWTLP+FH N
Sbjct: 181 RPEDEWDAISLGYTSGTTGNPKGVVTHHRGAYLNAVSNILAGNLGQHPVYLWTLPIFHCN 240
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL--D 301
GW F W A NVCLRK D +F LI KHGVTHMCGAPIV N L ++PEA +
Sbjct: 241 GWCFPWTLAAAAGINVCLRKVDPAKIFELIPKHGVTHMCGAPIVYNALINAPEAPKGVPT 300
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+PV L AG+ PP VL E++G ++H YG TE+ G CA +P W++LP ERA L
Sbjct: 301 KPVVGLIAGAAPPMAVLAGAETIGIKLTHVYGLTEVYGPASVCAEQPGWDELPVAERAKL 360
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K RQGV V +++PET V RDG+T GE++ RG +M GYLK+ +AT + + G
Sbjct: 361 KRRQGVPYPMQEAVTVLNPETMQEVPRDGETIGEVMFRGNIVMKGYLKNEKATKEALAGG 420
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++ DGY+ IKDRSKD+IISGGEN+SS E+E VLY HP + AAVV +PDP
Sbjct: 421 WFHTGDLGVLDADGYVIIKDRSKDIIISGGENVSSVEVEDVLYKHPAILFAAVVAKPDPK 480
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK G + TE +II YCR +P + PK++VF +PKT+TGK+QK
Sbjct: 481 WGEVPCAFVELKDGASA-----TEAEIIAYCREHLPGFKTPKSIVF-SSIPKTSTGKIQK 534
Query: 542 YVLGDIANS 550
++L D S
Sbjct: 535 FMLRDQVKS 543
>gi|297180336|gb|ADI16554.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [uncultured
bacterium HF4000_009C18]
Length = 542
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 244/558 (43%), Positives = 349/558 (62%), Gaps = 32/558 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ N AN PLTPL F+ER + SIIY YTW QTY RC++ AS+L+ GI
Sbjct: 8 LEKNNANFIPLTPLSFLERTKDIYPNYESIIYKKRVYTWKQTYDRCIKFASALTKHGIKL 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS++APN P ++E H+++PM+GA+ N INTRLD++T+S ILKH+++K + VD +
Sbjct: 68 GDTVSIMAPNTPELFEAHYSIPMTGAVLNAINTRLDSKTVSYILKHADAKALIVDCQFHN 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT-------YENMLAKG 176
++ + + L++ DDK+ AD D YE+ L +G
Sbjct: 128 IVKKAMEGLDKKI----LIIDIDDKQ-------------ADLKDAGNFGQFEYESFLNEG 170
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
D + W +PK + + LNYT GTT PKGVV ++ ++++ S + W +P + L+T
Sbjct: 171 DVNYIWKKPKDEWQAISLNYTSGTTGNPKGVVYHHRGAYLMSTGSAVAWNMPNRLNFLYT 230
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP- 295
+PMFH NGW + W A++ A +C+R A +F LI +H VTH GAPI+LN++ ++P
Sbjct: 231 VPMFHCNGWCYPWTLAMLHARVICIRNIRAKEIFNLITQHKVTHFGGAPIILNMIVNAPK 290
Query: 296 -EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLP 354
E K L V +LTA +PPP+ + + ESLGF V H YG TE G + C W +W+ L
Sbjct: 291 NEQKPLKHKVYVLTAAAPPPSIIFKKMESLGFEVMHVYGLTETYGHILQCVWNKEWDNLT 350
Query: 355 ARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEAT 414
E+A + ARQGVR +V+++DPET SV RDG+T GEI++RG +M GY KD EAT
Sbjct: 351 EDEKAEINARQGVRYPNTEDVEVMDPETMQSVPRDGKTMGEIMIRGNVVMKGYFKDKEAT 410
Query: 415 SKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474
K MK G +++GD+ + HP+GY++IKDRSKD+IISGGENISS EIE+ + H V+ AAV
Sbjct: 411 EKSMKGGWFHSGDLAVTHPNGYIQIKDRSKDIIISGGENISSIEIENTVAKHSSVSLAAV 470
Query: 475 VGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKT 534
V +PD W EIPCAFV L + TE++II++C+ + + +PK +VF ELPKT
Sbjct: 471 VAKPDEKWGEIPCAFVELTPEKKA-----TEEEIIKFCKETLAGFKIPKKIVF-GELPKT 524
Query: 535 ATGKVQKYVLGDIANSMS 552
+TGK++K+ L A MS
Sbjct: 525 STGKIKKFELRKKAKEMS 542
>gi|72383783|ref|YP_293137.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
gi|72123126|gb|AAZ65280.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
Length = 559
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 255/551 (46%), Positives = 333/551 (60%), Gaps = 23/551 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN PLTPL F++R A D +II+ T +WS T RC +LAS+L GI
Sbjct: 10 LERTNANHVPLTPLHFLDRCAEQYPDRDAIIHGHLTQSWSTTRERCRRLASALVKRGIGK 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS++APN PAM E H +P+SGA+ N IN RLDA + IL+H E+K++FVD S+
Sbjct: 70 GDTVSILAPNTPAMVEAHHGIPLSGAVLNAINCRLDADGVRFILRHGEAKVLFVDREFSA 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQFS 181
L + +P LV+ D P P + + YE L +GDP F
Sbjct: 130 LAAAAIDGL----DSPPLVIDILD----------PLAPAGELIGEFEYEQFLQQGDPAFP 175
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
+ P+ + D + LNYT GTTS PKGVV ++ +++++ L DW +P+ LWTLP+FH
Sbjct: 176 GLYPEDEWDAIALNYTSGTTSDPKGVVPSHRGAYLMSLLQLTDWGMPRGPKYLWTLPLFH 235
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQ 299
NGW F W T+VCLRK +A +F I H V H C APIVL L+++ E +
Sbjct: 236 ANGWCFAWAVTAAAGTHVCLRKVNAANIFHAIEAHSVDHFCAAPIVLASLATATDYERRS 295
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
PVRI TAGSPPPA VL LGF V H YG TE +G VS P WN + + E+A
Sbjct: 296 FSHPVRIRTAGSPPPASVLKAVSELGFDVEHVYGITEASGTPVSSFVNPAWNDMSSDEKA 355
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L ARQG R L + + DP+T +V RDG+T+GE+++RG +M GYLK+PEAT +
Sbjct: 356 RLMARQGNRAAALEGLYVADPDTMSAVPRDGKTQGELMLRGNIVMKGYLKNPEATQRAFS 415
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G + TGDV ++HPDGY++I DRSKDVIISGGENISS E+E VL+ HP V AAVV +P
Sbjct: 416 GGWFRTGDVAVVHPDGYIQITDRSKDVIISGGENISSVEVEDVLHQHPSVLIAAVVAQPH 475
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
P W E PCAF+ LK G E++II +CRAR+ Y P VV+ LPKT TGK+
Sbjct: 476 PKWGESPCAFIELKDGVSE----PAEEEIIAFCRARLAHYKCPVRVVY-GPLPKTGTGKI 530
Query: 540 QKYVLGDIANS 550
QKY L +IA S
Sbjct: 531 QKYRLREIACS 541
>gi|239820865|ref|YP_002948050.1| AMP-dependent synthetase and ligase [Variovorax paradoxus S110]
gi|239805718|gb|ACS22784.1| AMP-dependent synthetase and ligase [Variovorax paradoxus S110]
Length = 550
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/550 (44%), Positives = 340/550 (61%), Gaps = 20/550 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+DR + AN PLTPLGF+ERAA A + ++++ D T TW+QT RC +LAS+L + G
Sbjct: 10 LDRCE---ANHVPLTPLGFLERAALAHPNRVAVVHGDLTRTWAQTRERCHRLASALVARG 66
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ G VSV+APN PAM E HF VP++GA+ N IN RLD I+ IL+H E KL+ VD
Sbjct: 67 VQRGDTVSVLAPNTPAMLESHFGVPLAGAVLNAINHRLDPEGIAFILRHGECKLLMVDRE 126
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
++ + + L P ++ I D + P RI D YE++LA GDP F
Sbjct: 127 FAATVAAALELL---DNPPAVIDIEDHL-----APPGERIGETD----YESLLASGDPAF 174
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
P + P+ LNYT GTT PKGVV ++ +++++ + +W +P+ LWTLPMF
Sbjct: 175 PGRWPSDEWQPIALNYTSGTTGDPKGVVASHRGTYLMSLLQITNWAMPRAPKYLWTLPMF 234
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGW FTW T+VCLR+ A V I H V H+C AP+V+ +LS S + +L
Sbjct: 235 HANGWCFTWAVTAAAGTHVCLRRVSAEAVLEAIDTHQVDHLCAAPVVMAMLSDSAQNIRL 294
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
R VR+LTAGSPPP VL ++GF V H +G TE+ G VSCAW+ W+ L E+
Sbjct: 295 SRSVRVLTAGSPPPLAVLNAVLAMGFDVEHVFGITEVCGTPVSCAWQDGWDDLAPAEQGK 354
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
L+ RQGVR + + D +T V RDG T GE+++RG ++M+GY K+ AT K + +
Sbjct: 355 LRVRQGVRAAMFEGLMVGDADTLAPVPRDGTTAGELMLRGNTVMMGYFKNEAATRKALAN 414
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G + TGDV ++H +GY +I DRSKDVIISGGENISS E+E V++ HP V AAVV +PD
Sbjct: 415 GWFRTGDVAVLHGNGYAQITDRSKDVIISGGENISSVEVEDVVHGHPAVLHAAVVAQPDE 474
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PC F+ L+ G + +E++II +CR R+ + P+ V+F LPKTATGK+Q
Sbjct: 475 RWGEVPCVFIELRAGVAA----PSEQEIISFCRERLAHFKCPRRVIFT-PLPKTATGKIQ 529
Query: 541 KYVLGDIANS 550
K+ L + A S
Sbjct: 530 KFRLREQAGS 539
>gi|316934058|ref|YP_004109040.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
DX-1]
gi|315601772|gb|ADU44307.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
DX-1]
Length = 549
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 254/549 (46%), Positives = 342/549 (62%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PL+PL F+ER A + S++Y YTW +T RC + AS L GI
Sbjct: 12 LDKTPANFVPLSPLSFLERTANVYPELTSVVYEGRHYTWKETRARCRRFASWLVRSGIGR 71
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PN+PAM E+HFAVPM+GA+ N +N RLD+ I+ L H +K++ VD +
Sbjct: 72 GDTVAVMLPNVPAMVEVHFAVPMAGAVLNALNIRLDSAAIAFQLDHGGAKIILVDPEFAG 131
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ E ++L +K LV+ DDK S RI + YE +A GDP F+
Sbjct: 132 VVAEALTLM---TKPKPLVIDVDDKMYPGSH----RIGELE----YEYAVASGDPTFAGH 180
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
RP+ + D + L YT GTT PKGVV ++ ++ AV +++ + + V LWTLPMFH N
Sbjct: 181 RPEDEWDAISLGYTSGTTGNPKGVVTHHRGAYLNAVSNILAGNLGQHPVYLWTLPMFHCN 240
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W A NVCLRK D +F LI KHGVTHMCGAPIV N L ++PEA +
Sbjct: 241 GWCFPWTLAAAAGINVCLRKVDPAKIFELIPKHGVTHMCGAPIVYNALINAPEALKGAAA 300
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+PV L AG+ PP VL E++G ++H YG TE+ G CA +P W+ LP ERA L
Sbjct: 301 KPVVGLIAGAAPPMAVLAGAETIGIKLTHVYGLTEVYGPASVCAEQPGWDDLPVAERAKL 360
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K RQGV V ++DPET V RDG+T GE++ RG +M GYLK+ +AT + + G
Sbjct: 361 KRRQGVPYPMQEAVTVLDPETMQEVPRDGETIGEVMFRGNIVMKGYLKNEKATKEALAGG 420
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++ DGY+ IKDRSKD+IISGGEN+SS E+E VLY HP + AAVV +PDP
Sbjct: 421 WFHTGDLGVLDADGYVIIKDRSKDIIISGGENVSSVEVEDVLYKHPAILFAAVVAKPDPK 480
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK G+ + TE +II YCR +P + PK++VF +PKT+TGK+QK
Sbjct: 481 WGEVPCAFVELKDGSSA-----TEAEIIAYCREHLPGFKTPKSIVF-SSIPKTSTGKIQK 534
Query: 542 YVLGDIANS 550
++L D S
Sbjct: 535 FMLRDQVKS 543
>gi|146340775|ref|YP_001205823.1| acyl-CoA synthetase [Bradyrhizobium sp. ORS 278]
gi|146193581|emb|CAL77598.1| putative AMP-binding enzyme [Bradyrhizobium sp. ORS 278]
Length = 547
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 254/549 (46%), Positives = 341/549 (62%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PLTPL F+ R+A D S +Y ++TW QTY RC + AS L+ GI
Sbjct: 10 LDKNPANYVPLTPLSFLARSAAVYPDHVSTVYEGRSFTWRQTYERCRRFASYLAGRGIGT 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM E HFAVPM+GA+ NT+N RLDA +I+ L H+++K++ VD S
Sbjct: 70 GDTVAAMLPNIPAMNEAHFAVPMTGAVLNTLNIRLDAPSIAFQLDHAQAKIILVDPEFSG 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ E + L S V+ DD + S RI + YE +A GDP F
Sbjct: 130 VISEALKLM---SGAKPFVIDVDDASYAGGS----RIGEIE----YEAAVATGDPSFEPR 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
RP + D + ++YT GTT PKGVV ++ ++ AV +++ + + V LWTLPMFH N
Sbjct: 179 RPTDEWDAIAMSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGGLGQHPVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW F W A NVCLRK + +F LI+ HGVTHMCGAPIV N+L ++P+A + D
Sbjct: 239 GWCFPWTMAAAAGVNVCLRKVEPTKIFELIKTHGVTHMCGAPIVYNVLINAPDAPKGKRD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
RPV L AG+ PP VL ES+G ++H YG TE+ G CA +P W+ LPA ERA +
Sbjct: 299 RPVVGLIAGAAPPVAVLEGAESIGIKLTHVYGLTEVYGPASVCAEQPGWDDLPAPERARM 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K RQGV V +++PET V RDG+T GE++ RG +M GYLK+ +AT G
Sbjct: 359 KRRQGVPYPLQEAVTVLNPETMQEVPRDGETIGEVMFRGNIVMKGYLKNEKATQDAFAGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++ GY+ IKDRSKD+IISGGENISS E+E +LY HP V AAVV +PDP
Sbjct: 419 WFHTGDLGVLDEHGYVIIKDRSKDIIISGGENISSVEVEDILYKHPAVLFAAVVAKPDPK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAF+ LK G + E +II YCR+ + + PK VVF +PKT+TGK+QK
Sbjct: 479 WGEVPCAFIELKDGAQA-----KEAEIIAYCRSHMSGFKTPKVVVF-GPIPKTSTGKIQK 532
Query: 542 YVLGDIANS 550
++L + NS
Sbjct: 533 FLLRNEVNS 541
>gi|241765990|ref|ZP_04763913.1| AMP-dependent synthetase and ligase [Acidovorax delafieldii 2AN]
gi|241364039|gb|EER59283.1| AMP-dependent synthetase and ligase [Acidovorax delafieldii 2AN]
Length = 548
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 253/544 (46%), Positives = 333/544 (61%), Gaps = 17/544 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+PLGFIER A D +I++ TW+QTY RC QLASSL GI V+
Sbjct: 14 ANFAPLSPLGFIERTAEVYPDRLAIVHGTLRQTWAQTYARCRQLASSLQRAGIGKNDTVA 73
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
V+ PN P M E HF VPM+GA+ N +NTRLD I+ +L H E+K V VD + ++ +
Sbjct: 74 VMLPNTPPMVEAHFGVPMAGAVLNALNTRLDPEAIAFMLDHGEAKAVIVDPEFAGVMAKA 133
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
++L S+TP L++ +D +S TYE +A GDPQF+W P +
Sbjct: 134 LAL--RQSQTPLLLIDVEDALYGPASQKLGST-------TYEAFVAGGDPQFAWELPADE 184
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + LNYT GTT PKGVV ++ A+ ++++W +PK +V LWTLPMFH NGW F
Sbjct: 185 WDAIALNYTSGTTGNPKGVVYHHRGAATNAISNVLEWDMPKHAVYLWTLPMFHCNGWCFP 244
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP--VRI 306
W A NVCLR+ +A +F IR HGVTH CGAPIV LL ++P A + P V+
Sbjct: 245 WTVAARAGVNVCLRRVEAQAIFDAIRHHGVTHYCGAPIVHGLLVNAPAAMKEGVPAGVKA 304
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
+ AG+ PPA ++ E +GF ++H YG TE+ G CA WN L ERA L ARQG
Sbjct: 305 MVAGAAPPASMIEGMEKMGFDLTHVYGLTEVYGPATVCARHDAWNDLDIGERARLNARQG 364
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
VR ++D ET V DG+T GEI+ RG M GYLK+P+AT + G +++G
Sbjct: 365 VRYHLQRAARVLDSETMRPVPWDGETMGEIMFRGNIAMKGYLKNPKATEEAFAGGWFHSG 424
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+ + +PDGY++IKDRSKD+IISGGENISS E+E VLY HP V AAVV +PD W E P
Sbjct: 425 DLAVQYPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPDVLAAAVVAKPDAKWGETP 484
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546
CAFV LK G TT +DI+ +C+ + + VP+ VVF ELPKT+TGK+QK+ L
Sbjct: 485 CAFVELKAGAQ-----TTVEDIVAHCKKHLAGFKVPRAVVF-GELPKTSTGKIQKFELRK 538
Query: 547 IANS 550
A S
Sbjct: 539 QAGS 542
>gi|372270730|ref|ZP_09506778.1| AMP-binding protein [Marinobacterium stanieri S30]
Length = 545
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 244/551 (44%), Positives = 338/551 (61%), Gaps = 24/551 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN L+PL FI R A ++++ W++TY RC +LAS+L GI
Sbjct: 13 LDQNPANFAALSPLSFIARTAAVYPQRTAVVHQGVRRNWAETYSRCRRLASALEKRGIGK 72
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+APN+P ++E HF VPM+GA+ N +N RLDA I+ IL+H E+K+V VD S
Sbjct: 73 GDTVAVMAPNLPEVFEAHFGVPMAGAVLNALNIRLDAEAIAFILQHGEAKVVIVDREFSE 132
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQFS 181
+ + + ++ +V+ DD P + + YE ++ GDP +
Sbjct: 133 TIARAIKI----ARINPIVIDIDD----------PSFEGGELIGEMDYEAFISAGDPDYE 178
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + D + LNYT GTT PKGVV ++ ++ AV +++ W + V LWTLPMFH
Sbjct: 179 WQLPADEWDAITLNYTSGTTGDPKGVVYHHRGAYLNAVSNVLSWNMGDAPVYLWTLPMFH 238
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A +VCLR A ++ LIR V CGAPIVLN+L+++ + +
Sbjct: 239 CNGWCFPWSIAAAAGVSVCLRHVRADDIYNLIRDEKVNFFCGAPIVLNMLNNADDELKAG 298
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
++ V ++TAG+ PPA V+ E++GF V+H YG TE G V CAW +WN E+A
Sbjct: 299 IEHQVNVMTAGAAPPASVIEGMENMGFNVTHVYGLTETYGPCVVCAWHEEWNDSTPTEKA 358
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LK+RQGV+ L ++ + +P+T V +DG+T GEI MRG +M GYLK+P T K
Sbjct: 359 RLKSRQGVKAPMLEDLMVANPDTMEPVAKDGETIGEIFMRGNLVMKGYLKNPTTTDKSFA 418
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+ + H DGY+EIKDRSKD+IISGGENISS E+E VLY HP V EAAVV + D
Sbjct: 419 GGWFHSGDLAVWHEDGYIEIKDRSKDIIISGGENISSIEVEDVLYRHPQVMEAAVVAQQD 478
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+PCAFV+LK G D +E+DIIQ+CR + R+ PK VVF D LPKT+TGK+
Sbjct: 479 EKWGEVPCAFVTLKAGAD-----VSEQDIIQFCRDSMARFKAPKRVVFCD-LPKTSTGKI 532
Query: 540 QKYVLGDIANS 550
QK+VL AN+
Sbjct: 533 QKFVLRSQANA 543
>gi|242035975|ref|XP_002465382.1| hypothetical protein SORBIDRAFT_01g037600 [Sorghum bicolor]
gi|241919236|gb|EER92380.1| hypothetical protein SORBIDRAFT_01g037600 [Sorghum bicolor]
Length = 581
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/568 (44%), Positives = 353/568 (62%), Gaps = 14/568 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+D L N AN LTPL F+ERAA A S+++ YTW+ TYRRC +LAS+L+
Sbjct: 18 IDDLPRNDANYTALTPLWFLERAALAQPGRASVVHGPVRYTWADTYRRCRRLASALARRS 77
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ G V+VIAPN+PA+YE HF VPMSGA+ N +N RL+A TI+ +L+HS +++V VD
Sbjct: 78 VGHGSTVAVIAPNVPAVYEGHFGVPMSGAVVNCVNIRLNAETIAFLLEHSVAEVVMVDQE 137
Query: 121 SSSLLLEVVSLFPPHSKT---PKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD 177
+L E + + + P ++++ D S + YE L GD
Sbjct: 138 FFTLAEESLKIIAKKKTSAFRPPILIVIGDPTCDPKSL---QYALGKGAIEYEEFLKTGD 194
Query: 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
P+F+W PK + + L YT GTTS+PKGVV ++ +++A+ I W +P+ +V LWTL
Sbjct: 195 PEFNWKPPKDEWQSIALGYTSGTTSSPKGVVLHHRGAYLMALSVAIVWGMPEGAVYLWTL 254
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
PMFH NGW +TW A T++CLR+ ++ I K GVTH C AP+VLN L ++P +
Sbjct: 255 PMFHCNGWCYTWALAAFCGTSICLRQVSTKAIYEGITKQGVTHFCAAPVVLNNLINAPAS 314
Query: 298 KQ---LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLP 354
+ L V + AG+ P +L GF V+H YG +E G + CAWKP+W++LP
Sbjct: 315 ETFLPLPHVVNVNVAGAAPTPSLLAALSIRGFRVTHTYGLSETYGPSTVCAWKPEWDELP 374
Query: 355 ARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEAT 414
ER+ L RQG+R I + +D+VDP+T V DG++ GEIV+RG ++M GYLK+P+A
Sbjct: 375 LEERSRLHCRQGIRYIAMEGLDVVDPKTMAPVPADGKSYGEIVLRGNAVMKGYLKNPKAN 434
Query: 415 SKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474
++ G Y++GD+G+ HPDGY+E++DR KDVIISGGENISS E+E V+ +HP V EA+V
Sbjct: 435 AEAFAGGWYHSGDLGVKHPDGYVEVRDRMKDVIISGGENISSLEVEKVVCTHPAVLEASV 494
Query: 475 VGRPDPFWQEIPCAFVSLKTG-TDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPK 533
V R D W E PCAFV+LK G D DI+++CR R+P Y VPK+V+F LPK
Sbjct: 495 VARADERWGESPCAFVTLKDGAADGSDEAALANDIMRFCRERMPGYWVPKSVIF-GPLPK 553
Query: 534 TATGKVQKYVLGDIANSMS---MSHSRM 558
TATGK++K+ L A + + SRM
Sbjct: 554 TATGKIKKHELRAKAKELGPVIVKKSRM 581
>gi|407938358|ref|YP_006853999.1| AMP-dependent synthetase and ligase [Acidovorax sp. KKS102]
gi|407896152|gb|AFU45361.1| AMP-dependent synthetase and ligase [Acidovorax sp. KKS102]
Length = 548
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 255/552 (46%), Positives = 337/552 (61%), Gaps = 17/552 (3%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L N AN L+PL FIER A D +I++ D TW+QTY RC QLAS+L++ GI
Sbjct: 8 HLPRNEANFAALSPLSFIERTAEVYPDRLAIVHGDLRQTWAQTYARCRQLASALTNAGIG 67
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
V+V+ PN P M E HF VPM+GA+ NT+NTRLD I+ +L H E+K V VD S
Sbjct: 68 KNDTVAVMLPNTPPMVEAHFGVPMAGAVLNTLNTRLDPEAIAFMLDHGEAKAVIVDPEFS 127
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
+ + ++L + TP V+ D P + D YE +A GD F W
Sbjct: 128 GTMAKALALRT--ANTPIRVVEVQDALYG------PAVQSLGGTD-YEAFVASGDAAFVW 178
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P + D + LNYT GTT PKGVV ++ A+ ++++W +PK +V LWTLPMFH
Sbjct: 179 SLPADEWDAIALNYTSGTTGNPKGVVYHHRGAATNAISNVLEWDMPKHAVYLWTLPMFHC 238
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
NGW F W A NVCLR+ DA +F IR HGVTH CGAPIV LL ++PEA +
Sbjct: 239 NGWCFPWTIAARAGVNVCLRRVDAQAIFDAIRTHGVTHYCGAPIVHGLLVNAPEAMKAGV 298
Query: 303 P--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
P V+ + AG+ PPA ++ E +GF ++H YG TE+ G CA W+ L ERA
Sbjct: 299 PAGVKAMVAGAAPPASMIEGMEKMGFDLTHVYGLTEVYGPATVCAKHEAWDALDIGERAR 358
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
L ARQGVR +V ++DPET V +DG+T GEI+ +G M GYLK+P+AT +
Sbjct: 359 LNARQGVRYHLERDVRVLDPETMQPVPQDGETMGEIMFKGNIAMKGYLKNPKATDEAFAG 418
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +++GD+ + +PDGY++IKDRSKD+IISGGENISS E+E VLY HP V AAVV +PDP
Sbjct: 419 GWFHSGDLAVQYPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPDVLAAAVVAKPDP 478
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E PCAFV LK G TT +DI+ +C+ + + VP+ VVF ELPKT+TGK+Q
Sbjct: 479 KWGETPCAFVELKAGA-----QTTPEDIVAHCKKHLAGFKVPRAVVF-GELPKTSTGKIQ 532
Query: 541 KYVLGDIANSMS 552
K+ L A S +
Sbjct: 533 KFELRKQAGSAA 544
>gi|167045698|gb|ABZ10345.1| putative AMP-binding enzyme [uncultured marine bacterium
HF4000_APKG2098]
Length = 542
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 240/551 (43%), Positives = 347/551 (62%), Gaps = 18/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PLTP+ FIER + +++Y +YTW Q Y R ++ AS+L GI
Sbjct: 8 LDKNKANYVPLTPISFIERTKDIYPNYEAVVYKKRSYTWKQVYDRSIKFASALEKHGIKS 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G +S++A N P ++E H++VPM+GA+ N INTRLD++T+ ILKH+++K + VD
Sbjct: 68 GDTISIMAANTPELFEAHYSVPMTGAVLNAINTRLDSKTVGYILKHADAKALIVDRQFHG 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + F K +LI D + + +I + YE+ L KGD + W
Sbjct: 128 VVKKALESFG------KKILIIDIVDKQADLKDSEKIGEIE----YESFLEKGDVNYVWK 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
RPK + + LNYT GTT PKGVV ++ ++++ S W +P + L+T+PMFH N
Sbjct: 178 RPKDEWQAISLNYTSGTTGNPKGVVYHHRGSYLMSTGSAAAWNMPNRLNFLYTVPMFHCN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W A++ A +C+R A VF LI +H VTH GAPI+LN+L+S+P+ +Q L
Sbjct: 238 GWCYPWTLAMLHARVICIRNIRAKEVFDLITEHKVTHFGGAPIILNMLASAPKEEQKPLK 297
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V +LTA +PPP+ + + ++LGF V H YG TE G + CAW +W+ L E+A +
Sbjct: 298 HKVYVLTAAAPPPSIIFKKMKNLGFEVMHVYGLTETYGHILQCAWNKEWDDLNEDEKADI 357
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGVR L +VD++DPET + RDG+T GEI++RG +M GY KD EAT K MK G
Sbjct: 358 NARQGVRYPNLEDVDVMDPETMKPLPRDGKTIGEIMIRGNVVMKGYFKDKEATEKAMKGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+ +M+P+GY++IKDRSKD+IISGGENISS EIE+ + H V+ AAVV +PD
Sbjct: 418 WFHSGDLAVMYPNGYIQIKDRSKDIIISGGENISSIEIENTVAKHSSVSLAAVVAKPDEK 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W EIPCAFV L + TE++II++CR + + +PK +VF ELPKT+TGK++K
Sbjct: 478 WGEIPCAFVELAPEKKA-----TEEEIIKFCRETLAGFKIPKKIVF-GELPKTSTGKIKK 531
Query: 542 YVLGDIANSMS 552
+ L A MS
Sbjct: 532 FELRKKAKEMS 542
>gi|365883826|ref|ZP_09422938.1| putative AMP-binding enzyme [Bradyrhizobium sp. ORS 375]
gi|365287705|emb|CCD95469.1| putative AMP-binding enzyme [Bradyrhizobium sp. ORS 375]
Length = 547
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 255/549 (46%), Positives = 340/549 (61%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PLTPL F+ R+A D S +Y ++TW QTY RC + AS L GI
Sbjct: 10 LDKTPANYVPLTPLSFLARSAAVYPDHVSTVYEGRSFTWRQTYERCRRFASYLVGRGIGT 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM E HFAVPM+GA+ NT+N RLDA +I+ L H ++K++ VD S
Sbjct: 70 GDTVAAMLPNIPAMNEAHFAVPMTGAVLNTLNIRLDAPSIAFQLDHGQAKIILVDPEFSG 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ E + L S V+ DD + S RI + YE +A GDP F
Sbjct: 130 VISEALKLM---SGAKPFVIDVDDASYTGGS----RIGEIE----YEAAVAAGDPSFEPR 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
RP + D + ++YT GTT PKGVV ++ ++ AV +++ + + V LWTLPMFH N
Sbjct: 179 RPTDEWDAIAMSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGGLGQHPVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW F W A NVCLRK + +F LI+ HGVTHMCGAPIV N+L ++P+A + +
Sbjct: 239 GWCFPWTMAAAAGVNVCLRKVEPTRIFELIKAHGVTHMCGAPIVYNVLINAPDAPKGKRE 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+PV L AG+ PP VL ES+G ++H YG TE+ G CA +P W+ LPA ERA L
Sbjct: 299 KPVVGLIAGAAPPVAVLEGAESIGIKLTHVYGLTEVYGPASVCAEQPGWDDLPAPERARL 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K RQGV V ++DPET V RDG+T GE++ RG +M GYLK+ +AT + G
Sbjct: 359 KRRQGVPYPLQEAVTVLDPETMQEVPRDGETIGEVMFRGNIVMKGYLKNEKATQEAFAGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++ GY+ IKDRSKD+IISGGENISS E+E +LY HP V AAVV +PDP
Sbjct: 419 WFHTGDLGVLDEHGYVIIKDRSKDIIISGGENISSVEVEDILYKHPAVLFAAVVAKPDPK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK G + TE +II YCR+ + + PK VVF +PKT+TGK+QK
Sbjct: 479 WGEVPCAFVELKDGAQA-----TEAEIIAYCRSHMSGFKTPKVVVF-GPIPKTSTGKIQK 532
Query: 542 YVLGDIANS 550
++L + NS
Sbjct: 533 FLLRNEVNS 541
>gi|358637272|dbj|BAL24569.1| acetyl-CoA synthetase [Azoarcus sp. KH32C]
Length = 546
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/551 (44%), Positives = 347/551 (62%), Gaps = 16/551 (2%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN PL+PL F++R A ++I+ Y++ + RC++LAS+L + G+
Sbjct: 9 LERRAANCVPLSPLSFLKRTAAVYPHKTAVIHGARRYSYRELLERCVRLASALRAAGVAD 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VSV+APN+PAM E H+ VPM+GA+ NTINTRLDA ++ IL H+ S+++ D ++
Sbjct: 69 GDTVSVLAPNVPAMLEAHYGVPMAGAVLNTINTRLDAASVGFILGHARSRILIADAEYAA 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L+ + ++ P ++ I D + + + PP D+ YE+ LA GDP F+W
Sbjct: 129 LVEQALAGL---EARPTVIGIADVGQSPACARPPL----GDY--EYEDFLAGGDPGFAWT 179
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT APKGVV ++ ++ A+ + + + + SV LWTLPMFH N
Sbjct: 180 LPADEWATIALNYTSGTTGAPKGVVYHHRGAYLNAMGNALAFQLSPDSVYLWTLPMFHCN 239
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQLD 301
GWS TW + G T+VCLR+ +A VF LI +H VTH+CGAP+VLN+LS +PE A+
Sbjct: 240 GWSHTWAVTLAGGTHVCLRRVEAAAVFDLIARHRVTHLCGAPVVLNMLSHAPERPAQPFR 299
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV I T G+ PP V+ R E++GF V+H YG TE G CAW+P+W L + R +
Sbjct: 300 PPVAIATGGAAPPGAVIERMEAMGFRVTHLYGLTETYGPAALCAWQPQWAALDLQSRTAR 359
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGV +V ++D +G + DG + GEI +RG ++M GYL + AT G
Sbjct: 360 LARQGVPIHTQEDVVVLDRNSGEPIPCDGNSIGEICIRGNTVMKGYLDNATATEDAFAGG 419
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ ++H DGY+EIKDR+KDVIISGGENIS+ E+E LY HP+V EAAVV RPD
Sbjct: 420 WFHTGDLAVVHADGYIEIKDRAKDVIISGGENISTLEVEEALYRHPLVLEAAVVARPDEK 479
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+LK GT +E D+I +CR + + P+TVVF D LPKTATGK+QK
Sbjct: 480 WGETPCAFVTLKPGTAP----ISEADLIAWCREHLAHFKCPRTVVFAD-LPKTATGKIQK 534
Query: 542 YVLGDIANSMS 552
+ L + A ++
Sbjct: 535 FQLRERARTLQ 545
>gi|226954310|ref|ZP_03824774.1| AMP-dependent synthetase/ligase [Acinetobacter sp. ATCC 27244]
gi|226834936|gb|EEH67319.1| AMP-dependent synthetase/ligase [Acinetobacter sp. ATCC 27244]
Length = 547
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/555 (43%), Positives = 352/555 (63%), Gaps = 19/555 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L NPAN L+PL ++ERAA + +II+ TW Q+Y+RC Q A L+ GI
Sbjct: 6 DELPKNPANFVALSPLRYLERAAYIYPNQAAIIHGKRQITWQQSYQRCRQFAHQLTRLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 QKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAEAKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
+ E ++ H +V+ D E ++P + YE+ +A+GDP+F
Sbjct: 126 RPIAEEALT----HLHQDMIVIDVFDNEYEGE-----QLPLGQY--EYESWIAQGDPEFE 174
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W+ P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+FH
Sbjct: 175 WLLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPLFH 234
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A G TN+CLR+ D +F I +H V + CGAPIVL++L ++P+ ++
Sbjct: 235 CNGWCFAWSIAASGGTNICLRRVDPTLIFQYIAEHKVDYFCGAPIVLSMLINTPQEQRTA 294
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
D V ++ AG+ PP ++ ++G V+H YG TE G + CA + W++L +E+A
Sbjct: 295 FDHHVEVMVAGAAPPVAIIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSELSIQEQA 354
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L +RQGV + ++DPET V DG+T GEI+ RG +M GYLK+P+AT + +
Sbjct: 355 QLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPQATEEAFQ 414
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +PD
Sbjct: 415 GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYRHPAVMTAAVVAKPD 474
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
P WQE+PCAF+ LK G+ T+ ++II +C+ + R+ VPK VV I E+PKT+TGK+
Sbjct: 475 PRWQEVPCAFIELKQGS-----TTSAEEIILHCQKELARFKVPKDVV-ITEIPKTSTGKL 528
Query: 540 QKYVLGDIANSMSMS 554
QK++L + A + S
Sbjct: 529 QKFILREWAKERATS 543
>gi|222111655|ref|YP_002553919.1| AMP-dependent synthetase and ligase [Acidovorax ebreus TPSY]
gi|221731099|gb|ACM33919.1| AMP-dependent synthetase and ligase [Acidovorax ebreus TPSY]
Length = 548
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 249/546 (45%), Positives = 338/546 (61%), Gaps = 17/546 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+PL FIER A D +I++ + TW QTY RC +LASSL GI V+
Sbjct: 14 ANHAPLSPLSFIERTAEVYPDRLAIVHGELRQTWGQTYARCRRLASSLRRAGIGKNDTVA 73
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
V+ PN P M E HF VPM+GA+ N +NTRLD TI+ +L H E+K V VD + ++ +
Sbjct: 74 VMLPNTPPMVEAHFGVPMAGAVLNALNTRLDPETIAFMLDHGEAKAVIVDPEFAPVMAKA 133
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
++L S+ P L++ +D ++ + TYE+ LA+GD QF+W P +
Sbjct: 134 LALR--QSQAPLLLIDVEDAVYGPAAQRLGTL-------TYEDFLAQGDAQFAWELPGDE 184
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + LNYT GTT PKGVV ++ AV ++++W +PK +V LWTLPMFH NGW F
Sbjct: 185 WDAIALNYTSGTTGNPKGVVYHHRGAHTNAVSNVLEWDMPKHAVYLWTLPMFHCNGWCFP 244
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP--VRI 306
W A NVCLR+ +A +F IR HGVTH CGAPIV LL ++P A + P V+
Sbjct: 245 WTVAARAGVNVCLRRVEAQAIFDAIRNHGVTHYCGAPIVHGLLVNAPAAMKEGVPAGVKA 304
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
+ AG+ PPA ++ E +GF ++H YG TE+ G CA W+ L ERA L ARQG
Sbjct: 305 MVAGAAPPASMIEGMEQMGFDLTHVYGLTEVYGPATVCAKHAAWDALDIGERARLNARQG 364
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
VR +++P+T V DG+T GEI+ RG M GYLK+P+AT + + G +++G
Sbjct: 365 VRYHLQRAAMVLNPDTMEPVPHDGETMGEIMFRGNIAMKGYLKNPKATEEAFRGGWFHSG 424
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+ + +PDGY++IKDRSKD+IISGGENISS E+E VLY HP V AAVV +PDP W E P
Sbjct: 425 DLAVQYPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPDVLAAAVVAKPDPKWGETP 484
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546
CAFV LK G + T +DI+ +C+ + + VP+ VVF ELPKT+TGK+QK+ L
Sbjct: 485 CAFVELKAGAQA-----TPEDIVAHCKKHLAGFKVPRAVVF-GELPKTSTGKIQKFELRK 538
Query: 547 IANSMS 552
A S +
Sbjct: 539 QAGSAA 544
>gi|367476745|ref|ZP_09476120.1| putative AMP-binding enzyme [Bradyrhizobium sp. ORS 285]
gi|365270941|emb|CCD88588.1| putative AMP-binding enzyme [Bradyrhizobium sp. ORS 285]
Length = 547
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 254/549 (46%), Positives = 341/549 (62%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PLTPL F+ R+A D S +Y ++TW QTY RC + AS L+ GI
Sbjct: 10 LDKNPANYVPLTPLSFLARSAAVYPDHVSTVYEGRSFTWRQTYERCRRFASYLAGRGIGV 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM E HFAVPM+GA+ NT+N RLDA +I+ L H +++++ VD S
Sbjct: 70 GDTVAAMLPNIPAMNEAHFAVPMTGAVLNTLNIRLDAPSIAFQLDHGQARIILVDPEFSG 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ E + L S V+ DD + S RI + YE +A GDP F
Sbjct: 130 VISEALRLM---SGPKPFVIDVDDASYTGGS----RIGEIE----YEAAVAAGDPAFEPR 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
RP + D + ++YT GTT PKGVV ++ ++ AV +++ + + V LWTLPMFH N
Sbjct: 179 RPADEWDAIAMSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGGLGQHPVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW F W A NVCLRK + +F LI+ HGVTHMCGAPIV N+L ++P+A + +
Sbjct: 239 GWCFPWTMAAAAGVNVCLRKVEPTKIFELIKAHGVTHMCGAPIVYNVLINAPDAPKGRRE 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+PV L AG+ PP VL ES+G ++H YG TE+ G CA +P W+ LPA ERA L
Sbjct: 299 KPVVGLIAGAAPPVAVLEGAESIGIKLTHVYGLTEVYGPASVCAEQPGWDDLPAPERARL 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K RQGV V +++PET V RDG+T GE++ RG +M GYLK+ +AT G
Sbjct: 359 KRRQGVPYPLQEAVTVLNPETMQEVPRDGETIGEVMFRGNIVMKGYLKNEKATQDAFAGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++ GY+ IKDRSKD+IISGGENISS E+E +LY HP V AAVV +PDP
Sbjct: 419 WFHTGDLGVLDEHGYVIIKDRSKDIIISGGENISSVEVEDILYKHPAVLFAAVVAKPDPK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK G + TE +II YCR+ + + PK VVF +PKT+TGK+QK
Sbjct: 479 WGEVPCAFVELKDGAQA-----TEAEIIAYCRSHMSGFKTPKVVVF-GPIPKTSTGKIQK 532
Query: 542 YVLGDIANS 550
++L + NS
Sbjct: 533 FLLRNEVNS 541
>gi|121595441|ref|YP_987337.1| AMP-dependent synthetase and ligase [Acidovorax sp. JS42]
gi|120607521|gb|ABM43261.1| AMP-dependent synthetase and ligase [Acidovorax sp. JS42]
Length = 545
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 249/546 (45%), Positives = 338/546 (61%), Gaps = 17/546 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+PL FIER A D +I++ + TW QTY RC +LASSL GI V+
Sbjct: 11 ANHTPLSPLSFIERTAEVYPDRLAIVHGELRQTWGQTYARCRRLASSLRRAGIGKNDTVA 70
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
V+ PN P M E HF VPM+GA+ N +NTRLD TI+ +L H E+K V VD + ++ +
Sbjct: 71 VMLPNTPPMVEAHFGVPMAGAVLNALNTRLDPETIAFMLDHGEAKAVIVDPEFAPVMAKA 130
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
++L S+ P L++ +D ++ + TYE+ LA+GD QF+W P +
Sbjct: 131 LALR--QSQAPLLLIDVEDAVYGPAAQRLGTL-------TYEDFLAQGDAQFAWELPGDE 181
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + LNYT GTT PKGVV ++ AV ++++W +PK +V LWTLPMFH NGW F
Sbjct: 182 WDAIALNYTSGTTGNPKGVVYHHRGAHTNAVSNVLEWDMPKHAVYLWTLPMFHCNGWCFP 241
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP--VRI 306
W A NVCLR+ +A +F IR HGVTH CGAPIV LL ++P A + P V+
Sbjct: 242 WTVAARAGVNVCLRRVEAQAIFDAIRNHGVTHYCGAPIVHGLLVNAPAAMKEGVPAGVKA 301
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
+ AG+ PPA ++ E +GF ++H YG TE+ G CA W+ L ERA L ARQG
Sbjct: 302 MVAGAAPPASMIEGMEQMGFDLTHVYGLTEVYGPATVCAKHAAWDALDIGERARLNARQG 361
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
VR +++P+T V DG+T GEI+ RG M GYLK+P+AT + + G +++G
Sbjct: 362 VRYHLQRAAMVLNPDTMEPVPHDGETMGEIMFRGNIAMKGYLKNPKATEEAFRGGWFHSG 421
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+ + +PDGY++IKDRSKD+IISGGENISS E+E VLY HP V AAVV +PDP W E P
Sbjct: 422 DLAVQYPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPDVLAAAVVAKPDPKWGETP 481
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546
CAFV LK G + T +DI+ +C+ + + VP+ VVF ELPKT+TGK+QK+ L
Sbjct: 482 CAFVELKAGAQA-----TPEDIVAHCKKHLAGFKVPRAVVF-GELPKTSTGKIQKFELRK 535
Query: 547 IANSMS 552
A S +
Sbjct: 536 QAGSAA 541
>gi|398936245|ref|ZP_10666913.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM41(2012)]
gi|398168370|gb|EJM56390.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM41(2012)]
Length = 540
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/550 (44%), Positives = 338/550 (61%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P N L+PL FIER A+ D P++I+ TW+QTY RC +LAS+L+ GI
Sbjct: 8 LGPAAVNHIALSPLSFIERTASVYPDYPAVIHGSIRRTWAQTYTRCRRLASALAGRGIGK 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V+V+ PNIP M E+HF VPM GA+ N +N RLDA I+ +L+H E+K++ D
Sbjct: 68 NDTVAVMLPNIPEMLEVHFGVPMIGAVLNPLNVRLDAEAIAFMLQHGEAKVLITDREFHD 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + P LV+ +D E + + D YE +LA+GDP F+W
Sbjct: 128 VIHAAIGML----DHPPLVIDVNDPEYGEGQA----VSDLD----YEALLAEGDPAFAWQ 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P ++ + LNYT GTT PKGVV ++ ++ ++ + + W + V LWTLPMFH N
Sbjct: 176 WPANEWQAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNQMTWAMGNHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + +V LR+ D + LIR+H VTH+C APIVLN L + PE+ + +D
Sbjct: 236 GWCYPWIITAMAGVHVFLRRVDPQKILTLIREHQVTHLCAAPIVLNALVNMPESAKAAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA V+ E +G V+H YG TE G CAW +W++LP ERA +
Sbjct: 296 HPVNAMVAGAAPPAKVIGAVEEMGIKVTHVYGLTETYGPVTLCAWHAEWDELPLDERAQI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L V + D +T RDGQT GEI MRG ++M GYLK+P AT++ + G
Sbjct: 356 KSRQGVRYPTLEGVMVGDSKTLEPTPRDGQTIGEIFMRGNTVMKGYLKNPTATAEAFEGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + HP+GY+EIKDR KD+IISGGENIS+ E+E VLY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVCHPNGYVEIKDRLKDIIISGGENISTIELEGVLYRHPAVMEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK E DII +CR + + VP+TV+F LPKT+TGK+QK
Sbjct: 476 WGETPCAFITLKADHQD----VREADIISFCREHLAGFKVPRTVIFT-LLPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL D A ++
Sbjct: 531 YVLRDRAKAL 540
>gi|338974499|ref|ZP_08629859.1| putative AMP-binding enzyme [Bradyrhizobiaceae bacterium SG-6C]
gi|338232372|gb|EGP07502.1| putative AMP-binding enzyme [Bradyrhizobiaceae bacterium SG-6C]
Length = 548
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 256/550 (46%), Positives = 338/550 (61%), Gaps = 21/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PL+PL F+ R+A+ + S +Y T+TW+QT+ RC + AS L++ GI
Sbjct: 11 LDKNAANYVPLSPLSFLVRSASVYPNHTSAVYEGRTFTWAQTFERCKRFASFLAARGIRR 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM ELHFAVPM+G + N +N RLDA I+ L H +K++ VD SS
Sbjct: 71 GDTVAAMLPNIPAMNELHFAVPMAGGVLNALNIRLDAAAIAFQLDHGGAKIILVDPEFSS 130
Query: 124 LLLEVVSLFPPHSKTPK-LVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ + + K PK LV+ DD RI + YE +A GDP F+W
Sbjct: 131 VISDAMG----QMKGPKPLVVDVDDAAFDGGK----RIGEIE----YEAAVASGDPDFAW 178
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
+ P + D + L YT GTT PKGVV Y+ ++ AV +++ + + LWTLPMFH
Sbjct: 179 LTPNDEWDAIALGYTSGTTGNPKGVVTHYRGAYLNAVSNILAGGLGTHPIYLWTLPMFHC 238
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQL 300
NGW F W A NVCLRK D +F LI KHGVTHMCGAPIV N L ++P A +
Sbjct: 239 NGWCFPWTIAASAGVNVCLRKVDPAKIFELIPKHGVTHMCGAPIVYNTLINAPGAPKGKA 298
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
PV L AG+ PP VL ES+G ++H YG TE+ G CA +P W+ LPA +RA
Sbjct: 299 ATPVVGLIAGAAPPVAVLEGAESIGIKLTHVYGLTEVYGPASVCAEQPGWDDLPAEQRAQ 358
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
LK RQGV V ++DPET V RDG+T GE++ RG +M GYLK+ AT + +
Sbjct: 359 LKRRQGVPYPLQEAVTVLDPETMQEVPRDGETIGEVMFRGNIVMKGYLKNEAATKEAFEG 418
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+G++ GY+ IKDRSKD+IISGGENISS E+E VLY HP V AAVV +PDP
Sbjct: 419 GWFHTGDLGVLDEFGYVIIKDRSKDIIISGGENISSVEVEDVLYKHPAVLFAAVVAKPDP 478
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV LK G + TE +I+ YC++ +P + PK VVF +PKT+TGK+Q
Sbjct: 479 KWGEVPCAFVELKDGASA-----TEAEILAYCKSVLPGFKSPKAVVF-GAIPKTSTGKIQ 532
Query: 541 KYVLGDIANS 550
K+ L D NS
Sbjct: 533 KFALRDQVNS 542
>gi|392382561|ref|YP_005031758.1| putative AMP-binding enzyme [Azospirillum brasilense Sp245]
gi|356877526|emb|CCC98366.1| putative AMP-binding enzyme [Azospirillum brasilense Sp245]
Length = 544
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 243/546 (44%), Positives = 344/546 (63%), Gaps = 19/546 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTPL F+ R+A D +++Y +W + R LAS++S G+ PG VVS
Sbjct: 15 ANHVPLTPLDFLRRSAMVYPDKTAVVYGPLRRSWLEVEHRARALASAVSRAGVRPGEVVS 74
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
V+A N PAM E HF VP +GA+ N INTRLD ++ IL+H+ES+L VD S++
Sbjct: 75 VLAFNTPAMLEAHFGVPGAGAVLNAINTRLDPPAVAFILEHAESRLFLVDRGLSAVARAA 134
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
+ + P++V I D + P D YE+ L GDP+ W RP+ +
Sbjct: 135 LERM---TAPPRVVWIDDPAAQDAD-------PVGDL--EYEDFLKTGDPEAPWRRPEDE 182
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
+ + LNYT GTT PKGV+ ++ + A+ ++I + + SV LWTLPMFH NGW++
Sbjct: 183 WESIALNYTSGTTGNPKGVLYHHRGAHLNALGNVITFGLRPDSVYLWTLPMFHCNGWTYP 242
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLDR-PVR 305
W VGAT+VCLR D +F LI + VTH+CGAP+VL +L +P+A + D PV+
Sbjct: 243 WAVTAVGATHVCLRAVDPAAIFRLIAEEKVTHLCGAPVVLTMLIHAPDAVKRAFDHGPVQ 302
Query: 306 ILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
+ T G+ PP+ V+ E +GF ++H YG TE G + CAW+ W +LP ERA ARQ
Sbjct: 303 VATGGAAPPSAVIAGMERMGFRLTHLYGMTECYGPSTGCAWQEAWAELPLEERAVKMARQ 362
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYT 425
GV + ++E ++DP+TG V DG+T GE+ +RG ++M GYLK+P AT + ++DG +T
Sbjct: 363 GVPNVTMSEQTVLDPDTGREVPADGETLGELALRGNTVMKGYLKNPAATDEALRDGWLHT 422
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+ ++HPD Y+EIKDR+KD+IISGGENI+S E+E VLY HP V EAAVV RPD W E
Sbjct: 423 GDLAVLHPDRYVEIKDRAKDIIISGGENIASLEVEEVLYKHPHVMEAAVVARPDAKWGET 482
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLG 545
PCAFV+LK G++ +E ++I +CR + + P+TVVF LPKT+TGK+QK+VL
Sbjct: 483 PCAFVTLKPGSEG---RVSEAEVIGWCRDHLAHFKTPRTVVF-GALPKTSTGKIQKFVLR 538
Query: 546 DIANSM 551
+ A +
Sbjct: 539 EQARGL 544
>gi|456063797|ref|YP_007502767.1| AMP-dependent synthetase and ligase [beta proteobacterium CB]
gi|455441094|gb|AGG34032.1| AMP-dependent synthetase and ligase [beta proteobacterium CB]
Length = 550
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 250/551 (45%), Positives = 345/551 (62%), Gaps = 15/551 (2%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ NPAN P+TPL F+ER+A + +II+ + TWSQTY RC +LAS+L GI
Sbjct: 9 LERNPANFTPITPLLFLERSAAVYPNRLAIIHGELRQTWSQTYDRCRRLASALQKHGIGL 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PN P M E HF +PM+GA+ N +NTRLD +++ +L H E+++V VD S
Sbjct: 69 GDTVAVMLPNTPPMVEAHFGIPMAGAVLNALNTRLDPESVAFMLNHGEARVVIVDPEFSG 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + L S LV+ ++KE ++ TYE L++GDPQF+W
Sbjct: 129 VMKKALELAKKESGREFLVIDVEEKEFDVPGEKLGKL-------TYEKFLSEGDPQFAWQ 181
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ I AV +++DW + K + LWTLPMFH N
Sbjct: 182 VPADEWQAICLNYTSGTTGNPKGVVYHHRGAAINAVSNILDWDINKHPIYLWTLPMFHCN 241
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW F W A NVCLR+ DA +FA I+ HGVTH C APIV NLL ++P+ + P
Sbjct: 242 GWCFPWTVAARAGINVCLRRVDAQHIFAAIKDHGVTHYCAAPIVHNLLVNAPDELKEGVP 301
Query: 304 --VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ L AG+ PPA ++ E LGF ++H YG TE+ G C + +WN++ ERA L
Sbjct: 302 TGVKGLIAGAAPPASIIEGMEKLGFDLTHVYGLTEVYGPAAVCVKQDEWNEVDIGERARL 361
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGVR + ++DPET V DG+T GEI+ +G M GYLK+ +AT + + G
Sbjct: 362 NARQGVRYHMQQAIAVLDPETLEPVPADGETMGEIMFKGNIAMKGYLKNEKATKEAFEGG 421
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+ +M+PDGY+++KDRSKD+IISGGENISS E+E VLY HP V AAVV +PDP
Sbjct: 422 WFHSGDLAVMNPDGYVKMKDRSKDIIISGGENISSVEVEDVLYRHPAVIAAAVVAKPDPK 481
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF+ +K GM T DII +C+ + + VP+ +VF ELPKT+TGK+QK
Sbjct: 482 WGETPCAFLEIKP-----GMEVTPADIITHCKQHLAGFKVPRAIVFC-ELPKTSTGKIQK 535
Query: 542 YVLGDIANSMS 552
+ L A S S
Sbjct: 536 FELRKQAGSAS 546
>gi|71281260|ref|YP_270909.1| AMP-binding protein [Colwellia psychrerythraea 34H]
gi|71147000|gb|AAZ27473.1| AMP-binding protein [Colwellia psychrerythraea 34H]
Length = 541
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/551 (45%), Positives = 343/551 (62%), Gaps = 24/551 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+PN AN LTP+ F+ERAA D + + D +TW + ++RC + AS+L+ GI
Sbjct: 11 LEPNEANYMALTPISFLERAAFVYPDKTATVNGDIRHTWLEVFQRCSRFASALAKRGIGR 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VSVIAPNI +E+HF VPMSGA+ N+INTRLDA I+ IL H+E+K++ D S
Sbjct: 71 GDTVSVIAPNISEHFEVHFGVPMSGAVLNSINTRLDAEAIAFILVHAETKVLITDKEFSP 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD--TYENMLAKGDPQFS 181
++ + + + P LV+ DD P + TY+ +L +GD F
Sbjct: 131 IVKKALRMIP----HKPLVIDIDD----------PNFNEGQLIGSLTYDQLLEEGDSDFE 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
+RPK++ D + LNYT GTT PKGVV Y+ ++ AV +++ W + + V LWTLPMFH
Sbjct: 177 SIRPKNEWDAISLNYTSGTTGDPKGVVYHYRGAYLNAVSNVMSWSMGEHPVYLWTLPMFH 236
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLS-SSPEAK-Q 299
NGW F W A T+V LR A +F LIR V + CGAPIVLN+L+ + P K
Sbjct: 237 CNGWCFPWSIAATAGTSVSLRHVRAEPIFNLIRSEKVGYFCGAPIVLNMLNGAEPSLKAD 296
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
++ PV+++TAG+PPPA V+ E+ GF V+H YG TE G +V CAW +WN+ ++A
Sbjct: 297 INHPVKVMTAGAPPPASVIEGMEASGFKVTHTYGLTETYGPSVVCAWHDEWNEESPEKQA 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LK+RQGVR+ L ++ + DPET + +DG++ GEI MRG +M GYLK+P T
Sbjct: 357 KLKSRQGVRSPMLDQLMVADPETLEPMPKDGESVGEIFMRGNLVMKGYLKNPSTTQAAFD 416
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++GD+ + H DGY+EIKDRSKDVIISGGENISS E+E +LY HP V E AVV + D
Sbjct: 417 GGWLHSGDIAVWHSDGYIEIKDRSKDVIISGGENISSVEVEDILYRHPKVQEVAVVAKKD 476
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E PCAF+ T + TE+++I +CR + + PKT++F ELPKT+TGK+
Sbjct: 477 DKWGETPCAFI-----TPMPNVEITEQEMISFCRDNMAHFKAPKTIIF-GELPKTSTGKI 530
Query: 540 QKYVLGDIANS 550
QK+VL AN
Sbjct: 531 QKFVLRQQANE 541
>gi|115450551|ref|NP_001048876.1| Os03g0133500 [Oryza sativa Japonica Group]
gi|108706039|gb|ABF93834.1| AMP-dependent synthetase and ligase family protein, putative,
expressed [Oryza sativa Japonica Group]
gi|113547347|dbj|BAF10790.1| Os03g0133500 [Oryza sativa Japonica Group]
gi|215694765|dbj|BAG89956.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192027|gb|EEC74454.1| hypothetical protein OsI_09874 [Oryza sativa Indica Group]
Length = 550
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 254/554 (45%), Positives = 348/554 (62%), Gaps = 18/554 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ P+ AN PLTP+ F+ERAA D +++ Y+W +T RCL AS+L+ G
Sbjct: 1 MEGCMPSDANYAPLTPVSFLERAAVVYGDRTAVVSGGREYSWRETRERCLAGASALARLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ VV+VIA NIPAMYELHF+VPM+G + T+NTR DA +S++L+HSE+K+ V+
Sbjct: 61 VGRRDVVAVIAANIPAMYELHFSVPMAGGVLCTLNTRHDAAMVSVLLRHSEAKVFLVESQ 120
Query: 121 SSSLLLEVVSLFP-PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
++ + + L +K P ++ I+D + SSS YE +L
Sbjct: 121 FLAVAHDALRLLADAKAKFPLVIAISDTGDSSSSDG---------GGLEYEALLRDAPRG 171
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F P + DP+ LNYT GTTS PKGV+ ++ ++ ++ +L+ + V LWT+PM
Sbjct: 172 FEIRWPADERDPISLNYTSGTTSRPKGVIYSHRGAYLNSLAALLCNDMTSMPVYLWTVPM 231
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EA 297
FH NGW W A G TN+C+R +F I +HGVT+M GAP VLN++ ++P E
Sbjct: 232 FHCNGWCMAWATAAQGGTNICVRNVVPKVIFEQIVRHGVTNMGGAPTVLNMIVNAPASER 291
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
+ L R V I T G+PPP VL + E LGF V HGYG TE G C W+P+W+ LP E
Sbjct: 292 RPLPRRVLISTGGAPPPPQVLAKMEELGFNVQHGYGLTETYGPATRCVWRPEWDALPLAE 351
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
RA +KA QGV+ L +VDI DP T SV DG+ GE+++RG ++M GY KD AT +
Sbjct: 352 RARIKALQGVQHQMLQDVDIKDPVTMASVPSDGRAVGEVMLRGNTVMSGYYKDAAATEEA 411
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
M+ G TGD+G+ HPDGY+++KDR+KD+IISGGENISS E+ESVL+ H V +AAVV R
Sbjct: 412 MRGGWLRTGDLGVRHPDGYIQLKDRAKDIIISGGENISSIEVESVLFGHHAVLDAAVVAR 471
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD W E CAFV+LK G + T +II +CRAR+PRYM P+TVVF D LPKT+TG
Sbjct: 472 PDDHWGETACAFVTLKDGASA-----TAHEIIAFCRARLPRYMAPRTVVFGD-LPKTSTG 525
Query: 538 KVQKYVLGDIANSM 551
K QK++L + A +M
Sbjct: 526 KTQKFLLREKARAM 539
>gi|92117535|ref|YP_577264.1| acyl-CoA synthetase [Nitrobacter hamburgensis X14]
gi|91800429|gb|ABE62804.1| AMP-dependent synthetase and ligase [Nitrobacter hamburgensis X14]
Length = 547
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 253/552 (45%), Positives = 342/552 (61%), Gaps = 21/552 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L N AN PL+PL F+ER+A PS +Y +TW++TY RC + AS LSS G+
Sbjct: 8 DGLDKNSANFIPLSPLSFLERSAVVYPGLPSAVYEGRVFTWAETYERCRRFASFLSSRGV 67
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
G V+ + PNIPAM E+HFAVPM+GA+ N +N RL+A +++ +L H +K++ VD
Sbjct: 68 KRGDTVAAMLPNIPAMNEVHFAVPMTGAVLNALNIRLEAASLAFMLDHGGAKVILVDPEF 127
Query: 122 SSLLLEVVSLFPPHSKTPK-LVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S ++ E ++L PK V+ DD S RI + YE +A GDP F
Sbjct: 128 SGVIAEALALM----TCPKPFVIDVDDAAFSGGE----RIGAIE----YEAAVAAGDPGF 175
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
V P+ + D + L+YT GTT PKGVV ++ ++ A+ +++ + + LWTLPMF
Sbjct: 176 VAVFPQDEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAISNVLAGGLGQHPSYLWTLPMF 235
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGW F W A NVCLRK D +F LI+KHGVTHMCGAPIV N L ++P A +
Sbjct: 236 HCNGWCFPWAIAATAGVNVCLRKVDPVRIFELIQKHGVTHMCGAPIVYNTLINAPGAPKG 295
Query: 301 D--RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
+ RP+ L AG+ PP VL ES+G ++H YG TE G CA +P W LPA +R
Sbjct: 296 NAARPIVGLIAGAAPPVAVLEGAESIGIKLTHVYGLTETYGPASVCAEQPGWGALPADQR 355
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A LK RQGV + ++DPET V RDG+T GE++ RG +M GYLK+ AT++
Sbjct: 356 AQLKRRQGVCYPLQEAITVLDPETMREVPRDGETIGEVMFRGNIVMKGYLKNETATNEAF 415
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
G ++TGD+G++ GY+ IKDRSKD+IISGGENISS E+E +LY HP V AAVV +P
Sbjct: 416 AGGWFHTGDLGVLDEQGYVIIKDRSKDIIISGGENISSVEVEDILYKHPAVLLAAVVAKP 475
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
D W E+PCAFV LK G + TE +II +CR R+P + PK VVF +PKT+TGK
Sbjct: 476 DAKWGEVPCAFVELKDGARA-----TEAEIIAHCRERMPGFKTPKAVVF-GTIPKTSTGK 529
Query: 539 VQKYVLGDIANS 550
+QK++L + NS
Sbjct: 530 IQKFLLRNQVNS 541
>gi|375137115|ref|YP_004997765.1| acyl-CoA synthetase [Acinetobacter calcoaceticus PHEA-2]
gi|325124560|gb|ADY84083.1| acyl-CoA synthetase [Acinetobacter calcoaceticus PHEA-2]
Length = 545
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 251/551 (45%), Positives = 343/551 (62%), Gaps = 22/551 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L PAN L+PL ++ERAA D SII+ +W +TY+RC Q AS L GI
Sbjct: 6 DELPRTPANFVALSPLRYLERAAYIYPDQASIIHGKRQISWKETYQRCCQFASQLKQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PNIPAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+ESK++ VD
Sbjct: 66 EKNDTVSVLLPNIPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAESKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D E + F+ + YE +A+GD
Sbjct: 126 VNLAREALSLIPNQHI---IVIDVADTEYEGENQ---------FLGSFEYEEWIAQGDIN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
FSW P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FSWHLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI H V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAAHKVDYFCGAPIVLSMILNLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
D V ++ AG+ PP ++ ++G V+H YG TE G + CA + WN+L E
Sbjct: 294 ANFDHHVEVMVAGAAPPVAIIEGMRNMGINVNHVYGLTETYGPSALCASQSGWNELSIAE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + ++DPET V DGQT GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLDPETMEPVPNDGQTMGEIMFRGNIVMKGYLKNPKATQEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LK GT + T ++II +C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDARWQEVPCAFIELKMGTTA-----TPEEIIAHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIA 548
K+QK++L + A
Sbjct: 528 KLQKFILREWA 538
>gi|255561371|ref|XP_002521696.1| AMP dependent ligase, putative [Ricinus communis]
gi|223539087|gb|EEF40683.1| AMP dependent ligase, putative [Ricinus communis]
Length = 480
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 238/495 (48%), Positives = 333/495 (67%), Gaps = 30/495 (6%)
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V+++APN+PAMYELHFAVPM+G + T+NTR D+ +S++L+HSE+ ++FVD+ LL
Sbjct: 3 VAILAPNVPAMYELHFAVPMAGGVLCTLNTRYDSNMVSVLLEHSEANIIFVDYQ----LL 58
Query: 127 EVVS-----LFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT---YENMLAKGDP 178
+V S L K+P +VLI++ +S P F YE++LA G+
Sbjct: 59 DVASKALDLLTKRERKSPIMVLISESDGLS----------PTGFTSNTYEYESLLATGNK 108
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
F RPKS+ DP+ +NYT GTTS PKGVV ++ ++ ++ +++ V LWT+P
Sbjct: 109 GFEIRRPKSEWDPITVNYTSGTTSRPKGVVFSHRGAYLNSLATVLLHGTGAMPVYLWTVP 168
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--E 296
MFH+NGW TWG A G TN+C+RK +F I +H VTHM GAP VLN++ +SP +
Sbjct: 169 MFHSNGWCLTWGMAAQGGTNICIRKVTPNAIFDSIGQHNVTHMGGAPTVLNMIVNSPVSD 228
Query: 297 AKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
+ L V I+T G+PPP ++ + E LGF VSH YG TE G CAWKP+W+ LP
Sbjct: 229 RRTLPHKVEIMTGGAPPPPQIIFKMEELGFGVSHLYGLTETYGPGTYCAWKPEWDSLPPD 288
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
ERA +KARQG+ +GL +VD+ DP T SV DG+T GE+V RG ++M GYLKD +AT +
Sbjct: 289 ERAKVKARQGIHHLGLEDVDVRDPMTQESVPADGKTIGEVVFRGNTIMSGYLKDLKATEE 348
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
+ G + +GD+ + HPDGY+E+KDR KD+IISGGENIS+ E+E+VLYSHP + EAAVV
Sbjct: 349 AFQGGWFRSGDLAVKHPDGYIEVKDRLKDIIISGGENISTVEVETVLYSHPAIFEAAVVA 408
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
RPD W + PCAFV LK G + +E+DII++CR R+P YM P+TV+F ++LP+T+T
Sbjct: 409 RPDDHWGQTPCAFVKLKE-----GFVVSEQDIIKFCRDRLPHYMAPRTVIF-EDLPRTST 462
Query: 537 GKVQKYVLGDIANSM 551
GKVQK++L + A +M
Sbjct: 463 GKVQKFILREKAKTM 477
>gi|171060260|ref|YP_001792609.1| AMP-dependent synthetase and ligase [Leptothrix cholodnii SP-6]
gi|170777705|gb|ACB35844.1| AMP-dependent synthetase and ligase [Leptothrix cholodnii SP-6]
Length = 547
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/551 (44%), Positives = 342/551 (62%), Gaps = 19/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ NPAN L+PL FIERAA ++I+ + TW+QT+ RC +LAS+L G+
Sbjct: 11 LERNPANFVALSPLSFIERAAAVYPQRVAVIHGELRQTWAQTFERCRRLASALRQAGVGR 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PN+PAM+E HF VP +GA+ NT+NTRLDA I+ +L+H E+K++ D +
Sbjct: 71 GDTVAAMLPNVPAMFEAHFGVPATGAVLNTLNTRLDAEAIAFMLQHGEAKVLLTDREFAG 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ ++L H + ++I + E++ + I YE LA GD +W
Sbjct: 131 VIEPALALLGEH----RPLVIEVEDELAPAGKALGEI-------GYEAFLAGGDAAQAWT 179
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++ A ++I W +P+ LWTLPMFH N
Sbjct: 180 LPDDEWDAIALNYTSGTTGNPKGVVTHHRGAYLNAASNVIGWSLPQHPTYLWTLPMFHCN 239
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW F W A+V T+VCLR+ D ++ LIR H VTH+CGAPIV ++L +P A + +
Sbjct: 240 GWCFPWTMALVAGTSVCLRRVDPALIYTLIRAHRVTHLCGAPIVYSMLIHAPAALREGIT 299
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V L AG+ PPA V+ E+ G ++H YG TE+ G CA + W+ LP ERA L
Sbjct: 300 HTVNGLIAGAAPPAAVIEGCEAAGINLTHVYGLTEVYGPAAVCAKQESWDALPLAERAML 359
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
+RQGV V ++DP T V DG T GEI RG +M GYLK+P+AT++ G
Sbjct: 360 NSRQGVPYPLQQAVAVLDPATMQPVPADGVTMGEIFFRGNVVMKGYLKNPDATAEAFAGG 419
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ ++HPDGY++IKDRSKD+IISGGENISS E+E L+ HP V AAVV +PD
Sbjct: 420 WFHTGDLAVLHPDGYVKIKDRSKDIIISGGENISSLEVEDTLHRHPAVMLAAVVAQPDAK 479
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAF+ LK GM +E ++I +CR+ + R+ VPK +VF ELPKT+TGK+QK
Sbjct: 480 WGEVPCAFIELKP-----GMQVSEAELIDFCRSHLARFKVPKRIVF-SELPKTSTGKLQK 533
Query: 542 YVLGDIANSMS 552
+VL A S S
Sbjct: 534 FVLRGQAQSAS 544
>gi|6227012|gb|AAF06048.1|AC009513_4 Similar to gb|X94625 amp-binding protein from Brassica napus and is
a member of the PF|00501 AMP-binding enzymes
[Arabidopsis thaliana]
Length = 551
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 260/566 (45%), Positives = 338/566 (59%), Gaps = 54/566 (9%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD L AN+ PLTP+ F++RA+ + SIIY T +TW QTY RC +
Sbjct: 1 MDNLALFEANNVPLTPITFLKRASECYPNRTSIIYGQTRFTWPQTYDRCCRFD------- 53
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+APNIPAMYE+HFAVPM+GA+ N INTRLDA+TI+IIL+H++ K +FVD+
Sbjct: 54 ---------LAPNIPAMYEMHFAVPMTGAVLNPINTRLDAKTIAIILRHAQPKCLFVDYT 104
Query: 121 SSSLLLEVVSLFPPHSKT--PKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP 178
+ L+ EV+ L P + P ++ I + + SS YE ++ KGD
Sbjct: 105 FAPLIQEVLRLLPFDASKLHPLIISIIEIDSTTKRSS---------MELDYEGLIRKGDL 155
Query: 179 QFS----WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLL 234
S R ++ DP+ LNYT GTTS PKGV+ + W + V L
Sbjct: 156 TLSSSASLFRVHNEHDPISLNYTSGTTSEPKGVI--------------LGWEMGMCPVYL 201
Query: 235 WTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS 294
WTLPMFH NGW+ TW A G TNVC+R A ++ I HGVTHM P V +L
Sbjct: 202 WTLPMFHGNGWAHTWSVAARGGTNVCIRNVTAVEIYKNIGLHGVTHMSCVPTVFRILLEG 261
Query: 295 PEAKQLDR--PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNK 352
Q + PVR+LT GS PPA +L + E LGF V H YG TE +G + C W+ +WN+
Sbjct: 262 SRTNQSHKSLPVRVLTGGSSPPAALLEKVERLGFQVMHVYGLTEASGAALYCEWQDEWNR 321
Query: 353 LPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPE 412
LP ++ LKARQGVR I L EVD+ + +T SV RDG T GEIV++G +M GYLK+P+
Sbjct: 322 LPKHQQMKLKARQGVRNITLDEVDVKNTKTRESVPRDGITMGEIVLKGNIVMKGYLKNPK 381
Query: 413 ATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEA 472
ATS+ K G TGD+G++HPDG++EIKDRSKD+IISGGENISS E+E VLY H V EA
Sbjct: 382 ATSEVFKHGWLNTGDIGVIHPDGHIEIKDRSKDIIISGGENISSIEVERVLYEHQKVLEA 441
Query: 473 AVVGRPDPFWQEIPCAFVSLKTGTDS-----GGMMTTEKDIIQYCRARIPRYMVPKTVVF 527
AVV P P W E PCAFV L G + +T E D+I+YCR +P +M P+ VVF
Sbjct: 442 AVVAMPHPLWGETPCAFVVLNQGETNQRDREKESVTKEGDLIKYCRENMPHFMCPRKVVF 501
Query: 528 IDELPKTATGKVQK--YVLGDIANSM 551
++ELPK GK+ K L DIA +
Sbjct: 502 LEELPKNGNGKILKPNLSLRDIAKGL 527
>gi|452962746|gb|EME67854.1| Acyl-CoA synthetase/AMP-acid ligase II [Magnetospirillum sp. SO-1]
Length = 542
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 243/550 (44%), Positives = 338/550 (61%), Gaps = 20/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN LTPL F+ERAA D ++++ TW++T+ RC +LA++L GI P
Sbjct: 11 LDRNAANFVALTPLTFLERAAAVWPDRLAVVHGPVRRTWAETFARCRRLAATLIQRGIGP 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+++ N P +E HF VP++GA+ N +NTRLDA I+ IL H+E+K++ D S+
Sbjct: 71 GDTVALMGANTPETFEAHFGVPLTGAVLNAVNTRLDADAIAFILDHAEAKILITDREFSA 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + ++ P V+ DD + + TYE L + + W
Sbjct: 131 VVKKALAAL----GRPLTVIDIDDPQFKGGELLGEK--------TYEEFLDEAGAEAPWT 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ ++ AV + + W + +V LWTLPMFH N
Sbjct: 179 MPTDEWQAIALNYTSGTTGNPKGVVYHHRGAYLNAVSNALSWQMGDNTVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W AVV T+VCLR + A IR VT+ CGAPIVLN+++++P A + +
Sbjct: 239 GWCFPWTMAVVAGTSVCLRHVRVDAIMAAIRDETVTNFCGAPIVLNMINNAPAALKDGIS 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+++TAG+ PPAPV+ E +G+ V+H YG TE G V C W +WN L E+A +
Sbjct: 299 HAVKVMTAGAAPPAPVIAGMERMGWEVTHVYGLTECYGPTVQCVWHDRWNGLSIEEKAQI 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L + + DP T RDG+T GEI MRG ++M GYLK+ +AT + G
Sbjct: 359 KARQGVRGPMLEGLMVADPVTLEPAPRDGRTVGEIFMRGNNVMKGYLKNAKATEEAFAGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + HPDGY+EIKDRSKD+IISGGENISS E+E LY+HP V EAAVV RPD
Sbjct: 419 WFHTGDLAVRHPDGYIEIKDRSKDIIISGGENISSIEVEDTLYAHPAVLEAAVVARPDEK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK G ++ TE DII +CR R+ + VP+T+VF LPKT+TGKVQK
Sbjct: 479 WGETPCAFIALKDGAEA-----TEADIIAFCRERMAHFKVPRTIVF-GGLPKTSTGKVQK 532
Query: 542 YVLGDIANSM 551
++L A +
Sbjct: 533 FMLRQKAKEL 542
>gi|294649363|ref|ZP_06726794.1| o-succinylbenzoate--CoA ligase [Acinetobacter haemolyticus ATCC
19194]
gi|292824733|gb|EFF83505.1| o-succinylbenzoate--CoA ligase [Acinetobacter haemolyticus ATCC
19194]
Length = 547
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/555 (43%), Positives = 352/555 (63%), Gaps = 19/555 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L NPAN L+PL ++ERAA + +II+ TW Q+Y+RC Q A L+ GI
Sbjct: 6 DELPKNPANFVALSPLRYLERAAYIYPNQAAIIHGKRQITWQQSYQRCRQFAHQLTQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 QKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAEAKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
+ E ++L H +++ D + S +I + YE+ +A+GDP+F
Sbjct: 126 RPIAEEALTLI--HQD----IIVID---VFDSEYEGEQIALGQY--EYESWIAQGDPEFE 174
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W+ P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+FH
Sbjct: 175 WLLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPLFH 234
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A G TN+CLR+ D +F I +H V + CGAPIVL++L ++P ++
Sbjct: 235 CNGWCFAWSIAASGGTNICLRRVDPALIFKYIAEHKVDYFCGAPIVLSMLINAPLEQKVA 294
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
D V ++ AG+ PP ++ ++G V+H YG TE G + CA + W++L +E+A
Sbjct: 295 FDHHVEVMVAGAAPPVAIIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSELSIQEQA 354
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L +RQGV + ++DPET V DG+T GEI+ RG +M GYLK+P+AT + K
Sbjct: 355 QLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPQATEEAFK 414
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +PD
Sbjct: 415 GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYRHPAVMTAAVVAKPD 474
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
P WQE+PCAF+ LK G+ T+ ++II +C+ + R+ VPK VV I E+PKT+TGK+
Sbjct: 475 PRWQEVPCAFIELKQGS-----TTSPEEIILHCQKELARFKVPKDVV-ITEIPKTSTGKL 528
Query: 540 QKYVLGDIANSMSMS 554
QK++L + A + S
Sbjct: 529 QKFILREWAKERATS 543
>gi|424743211|ref|ZP_18171524.1| AMP-binding enzyme [Acinetobacter baumannii WC-141]
gi|422943472|gb|EKU38488.1| AMP-binding enzyme [Acinetobacter baumannii WC-141]
Length = 545
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/553 (44%), Positives = 343/553 (62%), Gaps = 22/553 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L PAN L+PL ++ERAA + SII+ +W +TY+RC Q AS L GI
Sbjct: 6 DELPRTPANFVALSPLRYLERAAYIYPNQASIIHGKRQISWKETYQRCCQFASQLKQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PNIPAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+ESK++ VD
Sbjct: 66 EKNDTVSVLLPNIPAMVEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAESKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D E + F+ + YE +A+GD
Sbjct: 126 VNLAREALSLIPDQHI---IVIDVADDEYEGENQ---------FIGSFEYEEWIAQGDIN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F+W P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FTWHLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI +H V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAEHKVDYFCGAPIVLSMIINLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
D V ++ AG+ PP ++ ++G V+H YG TE G + CA + WN+L E
Sbjct: 294 TNFDHHVEVMVAGAAPPVAIIEGMRNMGINVNHVYGLTETYGPSALCASQSGWNELSIAE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + ++DPET V DGQT GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGQTMGEIMFRGNIVMKGYLKNPQATQEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVFHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LK G + T ++II +C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDARWQEVPCAFIELKMGATA-----TPEEIIAHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIANS 550
K+QK++L + A
Sbjct: 528 KLQKFILREWAKE 540
>gi|381166879|ref|ZP_09876092.1| putative AMP-binding enzyme [Phaeospirillum molischianum DSM 120]
gi|380683931|emb|CCG40904.1| putative AMP-binding enzyme [Phaeospirillum molischianum DSM 120]
Length = 545
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 256/550 (46%), Positives = 346/550 (62%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PL+PLGF+ERAA+ D S+I++ +TW QTY RC +LAS+L+ G+
Sbjct: 11 LDKNPANFVPLSPLGFLERAASVFPDRISVIHDQRRFTWRQTYDRCRRLASALAQRGVGV 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+APNIPA +E F VPM GA+ +N RLDA I+ +L+H +K++ D S
Sbjct: 71 GDTVAVMAPNIPAAFEATFGVPMLGAVLCALNIRLDAEAIAFMLEHGGAKVLLTDREFSP 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + +SL K P LV+ +D + +S + V YE L+ GDP + W
Sbjct: 131 VITKALSLL----KAPPLVIDINDPDTASGT--------LIGVCDYETFLSSGDPAYVWR 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + + LNYT GTT PKGVV ++ +I A+ + + W + V LWTLPMFH N
Sbjct: 179 WPTDEWEAIALNYTSGTTGNPKGVVYHHRGAYINALGNAVTWGMSGHPVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W + T+VCLR+ + +FA I H VTHMCGAPIV+ +L+++PE ++ L
Sbjct: 239 GWCFPWTITALAGTHVCLRRIEGRAIFAAIETHKVTHMCGAPIVMGMLTNTPEKERRPLP 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V +TA +PPPA V+ R E GF ++H YG TE+ G CAW +WN LP ERA
Sbjct: 299 HEVAFMTAAAPPPAAVIERLEGQGFRITHVYGLTEVYGPVTVCAWHDEWNDLPQEERARK 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR + V I DP + V +DG T GE+ RG +M GY K+P AT++ G
Sbjct: 359 KARQGVRYVNQEAVMIADPLSLEPVPQDGNTMGEVFFRGNVVMKGYFKNPVATAEAFSGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G+ HPDGY+E+KDRSKD+IISGGENIS+ E+ESVLY HP V EAAVV RPD
Sbjct: 419 WFHTGDLGVWHPDGYIELKDRSKDIIISGGENISTIEVESVLYQHPAVAEAAVVARPDER 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF+ LK G TE +II + R ++ Y P+T++F LPKT+TGKVQK
Sbjct: 479 WGETPCAFIGLK----EGAAPVTEDEIIAFTRTKLAHYKCPRTIIFT-ALPKTSTGKVQK 533
Query: 542 YVLGDIANSM 551
YVL ++A M
Sbjct: 534 YVLREMAKKM 543
>gi|392378308|ref|YP_004985468.1| putative AMP-binding enzyme [Azospirillum brasilense Sp245]
gi|356879790|emb|CCD00716.1| putative AMP-binding enzyme [Azospirillum brasilense Sp245]
Length = 556
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 259/555 (46%), Positives = 346/555 (62%), Gaps = 23/555 (4%)
Query: 1 MDR-LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSF 59
DR L P+PAN PL+PL F++RAA D P+I + T T++Q + R + A +L
Sbjct: 12 FDRGLAPDPANHVPLSPLSFLKRAAKVYPDKPAIRHGRRTITYAQFHDRVRRFAGALLRA 71
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
G+ G VSV+APN+PA+ E H+AVP++GA+ N +NTRLDA I+ IL HSE+KL+ VD
Sbjct: 72 GVRRGDTVSVLAPNVPALLEAHYAVPLAGAVLNALNTRLDAAAIAFILDHSETKLLIVDR 131
Query: 120 LSSSLLLEVVSLFPPHSKTP-KLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP 178
S + ++ ++ P LV I D++ P P V+ YE+ LA DP
Sbjct: 132 ELSPVAKAALA----RTERPITLVEIADEQA--------PDAPSLGAVE-YEDFLAAADP 178
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
W P + + LNYT GTT PKGVV ++ ++ A+ + V +SV LWTLP
Sbjct: 179 A-PWHGPDDEWQAIALNYTSGTTGNPKGVVYHHRGAYLNALGNAFTLNVRPESVFLWTLP 237
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK 298
MFH NGW+++W G T+VCLR+ + +F I + GVTH+CGAPIVLN+L +P A
Sbjct: 238 MFHCNGWTYSWAVTAAGGTHVCLRRVEPAAIFDAIAELGVTHLCGAPIVLNMLIHAPAAV 297
Query: 299 QLDRPVRIL--TAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
+ P R++ T G+ PP+ VL +LGF V H YG TE G CA + W L A
Sbjct: 298 RRPAPRRVIVGTGGAAPPSAVLAGMATLGFEVVHMYGLTECYGPATVCAPQDGWEDLDAD 357
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
A ARQGV + + + ++D ETG V D QT GEI +RG ++M GYLK+P AT +
Sbjct: 358 GLALQFARQGVNHVAVEDATVLDRETGRPVPADAQTIGEIALRGNTVMKGYLKNPAATKE 417
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
+KDG + TGD+G++HPDGY+E+KDRSKD+IISGGENISS E+E LY HP V EAAVV
Sbjct: 418 ALKDGWFRTGDLGVLHPDGYIEVKDRSKDIIISGGENISSLEVEEALYRHPAVLEAAVVA 477
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
RPD W E PCAFV++K G + +E DIIQ+CR RI Y VP+TVVF D LPKT+T
Sbjct: 478 RPDDRWGESPCAFVTVKPGAER----PSESDIIQWCRDRIAHYKVPRTVVFSD-LPKTST 532
Query: 537 GKVQKYVLGDIANSM 551
GK+QK VL D A +
Sbjct: 533 GKIQKTVLRDAAREL 547
>gi|91977191|ref|YP_569850.1| acyl-CoA synthetase [Rhodopseudomonas palustris BisB5]
gi|91683647|gb|ABE39949.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
BisB5]
Length = 549
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 254/550 (46%), Positives = 338/550 (61%), Gaps = 21/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PL+PL F+ER A D S++Y YTW +T RC + AS L GI
Sbjct: 12 LDKTPANYVPLSPLSFLERTANVYPDLTSVVYEGRHYTWKETRARCRRFASWLVRNGIGR 71
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PN+PAM E HFAVPM+GA+ N +N RLDA I+ L+H +K++ VD ++
Sbjct: 72 GDTVAAMLPNVPAMVEAHFAVPMAGAVLNGLNIRLDAPAIAFQLEHGGAKIILVDPEFAA 131
Query: 124 LLLEVVSLFPPHSKTPK-LVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ + + K PK LV+ DDK S RI + YE +A GDP F+
Sbjct: 132 VIADALK----QMKGPKPLVIDVDDKMFPGSH----RIGELE----YEYAVASGDPSFAG 179
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
RPK + D + L YT GTT PKGVV ++ ++ AV +++ + V LWTLPMFH
Sbjct: 180 ERPKDEWDAIALGYTSGTTGNPKGVVTHHRGAYLNAVSNILAANLGAHPVYLWTLPMFHC 239
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--L 300
NGW F W A NVCLRK D +F LIR+HGVTHM GAPIV N L ++PEA +
Sbjct: 240 NGWCFPWTMAAAAGVNVCLRKVDPAKIFDLIRRHGVTHMAGAPIVYNALINAPEAPKGAA 299
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
RPV L AG+ PP VL ES+G ++H YG TE+ G CA +P W+ L +RA
Sbjct: 300 ARPVVGLIAGAAPPVAVLAGGESIGIKLTHVYGLTEVYGPASVCAEQPGWDDLSVADRAQ 359
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
LK RQGV V ++DPET V RDG+T GE++ RG +M GYLK+ +AT + +
Sbjct: 360 LKRRQGVPYPLQEAVTVLDPETMQEVPRDGETIGEVMFRGNIVMKGYLKNEKATKEALAG 419
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+G++ P GY+ IKDRSKD+IISGGEN+SS E+E VLY HP + AAVV +PDP
Sbjct: 420 GWFHTGDLGVLDPHGYVIIKDRSKDIIISGGENVSSVEVEDVLYKHPAILFAAVVAKPDP 479
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV LK G + TE +II YCR +P + PK+++F +PKT+TGK+Q
Sbjct: 480 KWGEVPCAFVELKEGASA-----TEAEIISYCREHLPGFKTPKSIMF-SAIPKTSTGKIQ 533
Query: 541 KYVLGDIANS 550
K++L D S
Sbjct: 534 KFMLRDQVKS 543
>gi|365093300|ref|ZP_09330366.1| AMP-dependent synthetase and ligase [Acidovorax sp. NO-1]
gi|363414474|gb|EHL21623.1| AMP-dependent synthetase and ligase [Acidovorax sp. NO-1]
Length = 548
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 253/552 (45%), Positives = 337/552 (61%), Gaps = 17/552 (3%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L N AN L+PL FIER A D +I++ + TW+QTY RC QLAS+L+ GI
Sbjct: 8 HLPRNEANFAALSPLSFIERTAEVYPDRLAIVHGELRQTWAQTYARCRQLASALTKAGIG 67
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
V+V+ PN P M E HF VPM+GA+ NT+NTRLD I+ +L H E+K V VD S
Sbjct: 68 KNDTVAVMLPNTPPMVEAHFGVPMAGAVLNTLNTRLDPEAIAFMLDHGEAKAVIVDPEFS 127
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
L + ++L + TP V+ D P + D Y+ +A GD F+W
Sbjct: 128 GTLAKALALRT--APTPLRVIEVQDALYG------PAVQSLGGTD-YDAFVASGDAAFAW 178
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P + D + LNYT GTT PKGVV ++ A+ ++++W +PK +V LWTLPMFH
Sbjct: 179 SLPADEWDAIALNYTSGTTGNPKGVVYHHRGAATNAISNVLEWDMPKHAVYLWTLPMFHC 238
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
NGW F W A NVCLR+ DA +F IR HGVTH CGAPIV LL ++P+A +
Sbjct: 239 NGWCFPWTIAARAGVNVCLRRVDAQAIFDAIRNHGVTHYCGAPIVHGLLVNAPDAMKAGI 298
Query: 303 P--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
P V+ + AG+ PPA ++ E +GF ++H YG TE+ G CA W+ L ERA
Sbjct: 299 PAGVKAMVAGAAPPASMIEGMEKMGFDLTHVYGLTEVYGPATVCAKHEAWDGLDIGERAR 358
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
L ARQGVR +V ++DPET L V +DG+T GEI+ +G M GYLK+P+AT +
Sbjct: 359 LNARQGVRYHLERDVRVLDPETMLPVPQDGETMGEIMFKGNIAMKGYLKNPKATEEAFAG 418
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +++GD+ + +PDGY++IKDRSKD+IISGGENISS E+E VLY HP V AAVV +PD
Sbjct: 419 GWFHSGDLAVQYPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPDVLAAAVVAKPDA 478
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E PCAFV LK G TT +DI+ +C+ + + VP+ VVF ELPKT+TGK+Q
Sbjct: 479 KWGETPCAFVELKAGA-----QTTPEDIVAHCKKHLAGFKVPRAVVF-GELPKTSTGKIQ 532
Query: 541 KYVLGDIANSMS 552
K+ L A S +
Sbjct: 533 KFELRKQAGSAA 544
>gi|262374305|ref|ZP_06067581.1| dicarboxylate-CoA ligase PimA [Acinetobacter junii SH205]
gi|262310863|gb|EEY91951.1| dicarboxylate-CoA ligase PimA [Acinetobacter junii SH205]
Length = 547
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/551 (44%), Positives = 347/551 (62%), Gaps = 19/551 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L PAN L+PL ++ERAA +II+ TW QTY+RC Q A L + GI
Sbjct: 6 DELPRTPANFVALSPLRYLERAAYIYPHQAAIIHGARQITWQQTYQRCRQFAHQLKNLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L H+ES+++ VD
Sbjct: 66 QKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLTHAESRVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
+L E ++L +V+ D+E + +I + YE+ LA+GDP+F
Sbjct: 126 KTLAEEALTLI----NQDIIVIDVFDEEYDAE-----QIALGQY--EYESWLAQGDPEFE 174
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W+ P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+FH
Sbjct: 175 WLLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPLFH 234
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A G TN+CLR+ D+ +F I +H V + CGAPIVL++L ++P ++
Sbjct: 235 CNGWCFAWSIAASGGTNICLRRVDSALIFKYISEHKVDYFCGAPIVLSMLINAPTDQRTS 294
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
D V ++ AG+ PP ++ ++G V+H YG TE G + CA + W+ L +E+A
Sbjct: 295 FDHHVEVMVAGAAPPVAIIEGMRNIGINVNHVYGLTETYGPSALCAAQAGWSDLSIQEQA 354
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L +RQGV + ++DPET V DG+T GEI+ RG +M GYLK+P+AT + K
Sbjct: 355 QLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPQATEEAFK 414
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +PD
Sbjct: 415 GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYRHPAVLTAAVVAKPD 474
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
P WQE+PCAF+ LK G + + +DII +C+ + R+ VPK VV I E+PKT+TGK+
Sbjct: 475 PRWQEVPCAFIELKQGISA-----SAEDIILHCQKELARFKVPKDVV-ITEIPKTSTGKL 528
Query: 540 QKYVLGDIANS 550
QK++L + A
Sbjct: 529 QKFILREWAKE 539
>gi|160900471|ref|YP_001566053.1| AMP-dependent synthetase/ligase [Delftia acidovorans SPH-1]
gi|160366055|gb|ABX37668.1| AMP-dependent synthetase and ligase [Delftia acidovorans SPH-1]
Length = 548
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 251/554 (45%), Positives = 337/554 (60%), Gaps = 21/554 (3%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L+ N AN PL+PLGFI R A + ++++ W +TY RC QLASSL G+
Sbjct: 8 HLERNSANHAPLSPLGFIARTAEVYPERLAVVHGTLRRNWGETYARCRQLASSLHKAGVG 67
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
V+V+ PN P M E HF VPM+GA+ N +NTRLDA TI+ +L H E+K++ VD +
Sbjct: 68 KNDTVAVMLPNTPPMVEAHFGVPMAGAVLNALNTRLDAETIAFMLDHGEAKVLIVDPEFT 127
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQF 180
++ + + L P LV+ +D P A+ V + Y++ +A GD F
Sbjct: 128 GVVAKALKL--RQRSAPLLVIQVEDALYG---------PAAEQVGSLDYDDFVAGGDAGF 176
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
W P + D + LNYT GTT PKGVV ++ I A+ ++++W +PK +V LWTLPMF
Sbjct: 177 DWQLPADEWDAIALNYTSGTTGNPKGVVYHHRGAAINAISNVLEWDMPKHAVYLWTLPMF 236
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGW F W A NVCLR+ +A +F IR HGVTH CGAPIV LL ++P A +
Sbjct: 237 HCNGWCFPWTVAARAGVNVCLRRVEAQAIFDAIRNHGVTHYCGAPIVHGLLVNAPAAMKE 296
Query: 301 DRP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
P V+ + AG+ PPA ++ E LGF ++H YG TE+ G CA W+ L ER
Sbjct: 297 GVPAGVKAMVAGAAPPASMIEGMEQLGFDITHVYGLTEVYGPATVCAKHAAWDALDIGER 356
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A L +RQGVR ++DPET V DGQT GEI+ +G M GYLK+P+AT +
Sbjct: 357 ARLNSRQGVRYHLQRSASVLDPETMEPVPHDGQTMGEIMFQGNIAMKGYLKNPQATDEAF 416
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
+ G ++TGD+ + HPDGY++IKDRSKD+IISGGENISS E+E VLY HP V AAVV +P
Sbjct: 417 RGGWFHTGDLAVQHPDGYIQIKDRSKDIIISGGENISSIEVEDVLYRHPAVLAAAVVAKP 476
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
DP W E PCAF+ LK G TT +DI+ +C+ + Y VP+ VVF ELPKT+TGK
Sbjct: 477 DPKWGETPCAFIELKAGA-----QTTAEDIVAHCKKHLAGYKVPRAVVF-GELPKTSTGK 530
Query: 539 VQKYVLGDIANSMS 552
+QK+ L A S+
Sbjct: 531 IQKFELRRQAGSVQ 544
>gi|171463917|ref|YP_001798030.1| AMP-dependent synthetase and ligase [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171193455|gb|ACB44416.1| AMP-dependent synthetase and ligase [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 550
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 251/551 (45%), Positives = 346/551 (62%), Gaps = 15/551 (2%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN P+TPL F+ER+A + +II+ TWSQTY RC +LAS+L GI
Sbjct: 9 LDRNPANYTPITPLLFLERSAEIYPNKTAIIHGKLRQTWSQTYERCRRLASALQKHGIGL 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PN P M E+HF +PM+GA+ N +NTRLDA +I+ +L H E+K+V VD S
Sbjct: 69 GDTVAVMLPNTPPMVEVHFGIPMAGAVLNALNTRLDAESIAFMLNHGEAKVVIVDPEFSV 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + + S LV+ +KE ++ TYE L++GDP F+W
Sbjct: 129 VMKKALEIAKKDSGREFLVIDVGEKEFDVPGEKLGKL-------TYEQFLSEGDPSFAWQ 181
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ I AV +++DW + K V LWTLPMFH N
Sbjct: 182 VPADEWQAICLNYTSGTTGNPKGVVYHHRGAAINAVSNVLDWDINKHPVYLWTLPMFHCN 241
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW F W A NVCLR+ DA +FA I++HGVTH C APIV NLL ++P+ + P
Sbjct: 242 GWCFPWTIAARAGVNVCLRRVDAQHIFAAIKEHGVTHYCAAPIVHNLLVNAPDELKAGVP 301
Query: 304 --VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ L AG+ PPA ++ E LGF ++H YG TE+ G C + +WN L +RA L
Sbjct: 302 TGVKGLIAGAAPPASIIEGMEKLGFDLTHVYGLTEVYGPASVCVKQDEWNDLDIGKRARL 361
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGVR + ++DPET V DG+T GEI+ +G M GYLK+ +AT + + G
Sbjct: 362 NARQGVRYHMQQAIAVLDPETMKPVPADGETMGEIMFKGNIAMKGYLKNEKATQEAFEGG 421
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+ +M+PDGY+++KDRSKD+IISGGENISS E+E VLY HP VN AAVV +PDP
Sbjct: 422 WFHSGDLAVMNPDGYVKMKDRSKDIIISGGENISSVEVEDVLYRHPAVNAAAVVAKPDPK 481
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF+ +K G+D T ++II +C+ + + VP+ +VF ELPKT+TGK+QK
Sbjct: 482 WGETPCAFLEIKPGSD-----VTPEEIIAHCKQHLAGFKVPRAIVFC-ELPKTSTGKIQK 535
Query: 542 YVLGDIANSMS 552
+ L A S +
Sbjct: 536 FELRKQAGSAT 546
>gi|333913231|ref|YP_004486963.1| o-succinylbenzoate--CoA ligase [Delftia sp. Cs1-4]
gi|333743431|gb|AEF88608.1| o-succinylbenzoate--CoA ligase [Delftia sp. Cs1-4]
Length = 548
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 251/554 (45%), Positives = 337/554 (60%), Gaps = 21/554 (3%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L+ N AN PL+PLGFI R A + ++++ W +TY RC QLASSL G+
Sbjct: 8 HLERNSANHAPLSPLGFIARTAEVYPERLAVVHGTLRRNWGETYSRCRQLASSLHKAGVG 67
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
V+V+ PN P M E HF VPM+GA+ N +NTRLDA TI+ +L H E+K++ VD +
Sbjct: 68 KNDTVAVMLPNTPPMVEAHFGVPMAGAVLNALNTRLDAETIAFMLDHGEAKVLIVDPEFT 127
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQF 180
++ + + L P LV+ +D P A+ V + Y++ +A GD F
Sbjct: 128 GVVAKALKL--RQRSAPLLVIQVEDALYG---------PAAEQVGSLDYDDFVAGGDAGF 176
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
W P + D + LNYT GTT PKGVV ++ I A+ ++++W +PK +V LWTLPMF
Sbjct: 177 DWQLPADEWDAIALNYTSGTTGNPKGVVYHHRGAAINAISNVLEWDMPKHAVYLWTLPMF 236
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGW F W A NVCLR+ +A +F IR HGVTH CGAPIV LL ++P A +
Sbjct: 237 HCNGWCFPWTVAARAGVNVCLRRVEAQAIFDAIRNHGVTHYCGAPIVHGLLVNAPAAMKE 296
Query: 301 DRP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
P V+ + AG+ PPA ++ E LGF ++H YG TE+ G CA W+ L ER
Sbjct: 297 GVPAGVKAMVAGAAPPASMIEGMEQLGFDITHVYGLTEVYGPATVCAKHAAWDALDIGER 356
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A L +RQGVR ++DPET V DGQT GEI+ +G M GYLK+P+AT +
Sbjct: 357 ARLNSRQGVRYHLQRSASVLDPETMEPVPHDGQTMGEIMFQGNIAMKGYLKNPQATDEAF 416
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
+ G ++TGD+ + HPDGY++IKDRSKD+IISGGENISS E+E VLY HP V AAVV +P
Sbjct: 417 RGGWFHTGDLAVQHPDGYIQIKDRSKDIIISGGENISSIEVEDVLYRHPAVLAAAVVAKP 476
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
DP W E PCAF+ LK G TT +DI+ +C+ + Y VP+ VVF ELPKT+TGK
Sbjct: 477 DPKWGETPCAFIELKAGA-----QTTAEDIVAHCKKHLAGYKVPRAVVF-GELPKTSTGK 530
Query: 539 VQKYVLGDIANSMS 552
+QK+ L A S+
Sbjct: 531 IQKFELRRQAGSVQ 544
>gi|411009242|ref|ZP_11385571.1| AMP-binding protein [Aeromonas aquariorum AAK1]
Length = 540
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/545 (45%), Positives = 344/545 (63%), Gaps = 24/545 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ NPAN LTP+ F+ RAA D P++I+ +W+QT RRC QLAS+L GI
Sbjct: 11 LEKNPANYQALTPISFLGRAARVYPDYPALIHGPLRQSWAQTERRCRQLASALRLRGIGE 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS++APN PAM+E HF VPMSGA+ NTINTRLDA +++ I +H++SK+V VD +
Sbjct: 71 GDTVSIVAPNTPAMFEAHFGVPMSGAVLNTINTRLDAESMAFIFQHAQSKVVLVDREFGT 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD--TYENMLAKGDPQFS 181
L+ + ++L P L+ I D P + V TYE LA+G+
Sbjct: 131 LVQKALALV---ENQPLLIAIDD-----------PLYQQGELVSELTYEGFLAEGNGDEP 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
P+ + + LNYT GTT PKGVV ++ + AV++++ W +PK SV LWTLPMFH
Sbjct: 177 GWLPQDEWQAISLNYTSGTTGNPKGVVYHHRGAHLNAVNNVLSWELPKHSVYLWTLPMFH 236
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQ 299
NGW F W A +VCLR A ++ + +H VTH C APIVLN+L+++ A +
Sbjct: 237 CNGWCFPWTLAATAGVSVCLRHVQAAAIYEALHEHKVTHFCAAPIVLNMLNNADPALKRG 296
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
LD P++ +TAG+ PPA V+ E++G V+H YG TE G V C + W A +
Sbjct: 297 LDHPIKAMTAGAAPPATVIAGMEAMGIAVTHVYGLTETYGPCVLCEPQRSWQGQDATTLS 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKARQGV + E+ +++P +G V RDG+T GEIV+RG +M GYLK+P A+++ M
Sbjct: 357 RLKARQGVASPLQGEMWVINPVSGEPVPRDGKTMGEIVLRGNVVMKGYLKNPVASAEAMA 416
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
+G + +GD+ + HPDGY+EIKDRSKD+IISGGENISS E+E VLY HP V+E AV+ PD
Sbjct: 417 EGGFRSGDLAVWHPDGYVEIKDRSKDIIISGGENISSLEVEDVLYRHPDVDEVAVIAMPD 476
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+PCAFV LK G + ++ ++I +CR ++ + PK ++F LPKT+TGKV
Sbjct: 477 EKWGEVPCAFVKLKEGRE-----LSQAELIAFCREQMAHFKAPKRIIFTP-LPKTSTGKV 530
Query: 540 QKYVL 544
QK++L
Sbjct: 531 QKFML 535
>gi|417553785|ref|ZP_12204854.1| AMP-binding enzyme [Acinetobacter baumannii Naval-81]
gi|417560352|ref|ZP_12211231.1| AMP-binding enzyme [Acinetobacter baumannii OIFC137]
gi|421201550|ref|ZP_15658709.1| AMP-binding enzyme [Acinetobacter baumannii OIFC109]
gi|421454379|ref|ZP_15903728.1| AMP-binding enzyme [Acinetobacter baumannii IS-123]
gi|421634124|ref|ZP_16074743.1| AMP-binding enzyme [Acinetobacter baumannii Naval-13]
gi|421805860|ref|ZP_16241736.1| AMP-binding enzyme [Acinetobacter baumannii WC-A-694]
gi|395522934|gb|EJG11023.1| AMP-binding enzyme [Acinetobacter baumannii OIFC137]
gi|395563582|gb|EJG25235.1| AMP-binding enzyme [Acinetobacter baumannii OIFC109]
gi|400213146|gb|EJO44103.1| AMP-binding enzyme [Acinetobacter baumannii IS-123]
gi|400390202|gb|EJP57249.1| AMP-binding enzyme [Acinetobacter baumannii Naval-81]
gi|408704842|gb|EKL50198.1| AMP-binding enzyme [Acinetobacter baumannii Naval-13]
gi|410408122|gb|EKP60097.1| AMP-binding enzyme [Acinetobacter baumannii WC-A-694]
Length = 542
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/553 (44%), Positives = 346/553 (62%), Gaps = 22/553 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L PAN L+PL ++ERAA D SII+ + +W QTY+RC Q AS L GI
Sbjct: 6 NELPRTPANFVALSPLRYLERAAYIYPDQASIIHGNRQISWKQTYQRCRQFASQLQQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 TKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D+E + F+ + YE +A+GD
Sbjct: 126 VNLAREALSLIPNQHI---IVIDVADEEYEGENQ---------FLGSFEYEEWIAQGDAN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FEWHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI KH V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGAPIVLSMIINLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++ V ++ AG+ PP V+ ++G V+H YG TE G + CA + W+ L E
Sbjct: 294 PIIEHYVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSITE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + ++DPET V DG+T GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPKATEEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LKTG + T ++II++C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDERWQEVPCAFIELKTGASA-----TPEEIIEHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIANS 550
K+QK++L + A
Sbjct: 528 KLQKFILREWAKE 540
>gi|402758531|ref|ZP_10860787.1| acyl-CoA synthetase [Acinetobacter sp. NCTC 7422]
Length = 547
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 244/558 (43%), Positives = 347/558 (62%), Gaps = 19/558 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L PAN L+PL ++ERAA +II+ D TW QTY+RC Q A L GI
Sbjct: 6 DELPKTPANFVALSPLRYLERAAYIYPQQAAIIHADRHITWQQTYQRCRQFAHQLIRLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PNIPAM E HFAVPM+GA+ NT+NTRLDA++I+ +L+H+E+K++ VD
Sbjct: 66 QKNDTVSVLLPNIPAMIEAHFAVPMAGAVLNTLNTRLDAKSIAFMLEHAEAKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
+ EV++L P +V+ D E +I + YE+ LA+GDP+F
Sbjct: 126 RQVAAEVLTLIP----QDIIVIDVFDAEFDGE-----QIALGQY--EYESWLAQGDPEFE 174
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W+ P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++ LWTLP+FH
Sbjct: 175 WLLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRATYLWTLPLFH 234
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A G TN+CLR+ D +F I H V + CGAPIVL++L ++P ++
Sbjct: 235 CNGWCFAWSIAASGGTNICLRRVDPTLIFKYIAAHKVDYFCGAPIVLSMLINTPNEQRTA 294
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+ V ++ AG+ PP ++ ++G V+H YG TE G + CA + W+ L +E+A
Sbjct: 295 FEHHVEVMVAGAAPPVAIIEGMHNIGINVNHVYGLTETYGPSALCASQAGWSDLSIQEQA 354
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L +RQGV + ++DPET V DGQT GEI+ RG +M GYLK+P+AT++ K
Sbjct: 355 QLHSRQGVPYPLQDSMRVLDPETMQPVPNDGQTMGEIMFRGNIVMKGYLKNPQATAEAFK 414
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+ + H DGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +PD
Sbjct: 415 GGWFHTGDLAVSHADGYAKITDRSKDIIISGGENISSLEVEDVLYRHPAVLTAAVVAKPD 474
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
WQE+PCAF+ LK GT + + +++I +C+ + R+ VPK VV I E+PKTATGK+
Sbjct: 475 ARWQEVPCAFIELKQGTSA-----SAEELIAHCQQELARFKVPKDVV-ITEIPKTATGKL 528
Query: 540 QKYVLGDIANSMSMSHSR 557
QK++L + A + S R
Sbjct: 529 QKFILREWAKERAASEFR 546
>gi|260551944|ref|ZP_05825806.1| acyl-CoA synthetase/AMP-acid ligase II [Acinetobacter sp. RUH2624]
gi|260405347|gb|EEW98842.1| acyl-CoA synthetase/AMP-acid ligase II [Acinetobacter sp. RUH2624]
Length = 542
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/553 (44%), Positives = 345/553 (62%), Gaps = 22/553 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L PAN L+PL ++ERAA D SII+ + +W +TY+RC Q AS L GI
Sbjct: 6 DELPRTPANFVALSPLRYLERAAYIYPDQASIIHGNRQISWKETYQRCRQFASQLQQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 TKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D+E + F+ + YE +A+GD
Sbjct: 126 VNLAREALSLIPNQHI---IVIDVADEEYEGENQ---------FLGSFEYEEWIAQGDAN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W+ P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FEWLLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI KH V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGAPIVLSMIINLPKQKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++ V ++ AG+ PP V+ ++G V+H YG TE G + CA + W+ L E
Sbjct: 294 PSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSITE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + ++DPET V DG+T GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPKATEEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LKTG T ++II +C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDERWQEVPCAFIELKTGA-----TVTPEEIIAHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIANS 550
K+QK++L + A
Sbjct: 528 KLQKFILREWAKE 540
>gi|148255483|ref|YP_001240068.1| acyl-CoA synthetase [Bradyrhizobium sp. BTAi1]
gi|146407656|gb|ABQ36162.1| putative AMP-binding enzyme [Bradyrhizobium sp. BTAi1]
Length = 547
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 253/549 (46%), Positives = 339/549 (61%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PLTPL F+ R+A D S +Y ++TW QTY RC + AS L+ GI+
Sbjct: 10 LDKNAANYVPLTPLSFLARSAAVYPDHVSTVYEGRSFTWRQTYERCRRFASYLAGRGISE 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM E HFAVPM+GA+ NT+N RLDA +I+ L H ++K++ VD S
Sbjct: 70 GDTVAAMLPNIPAMNEAHFAVPMTGAVLNTLNIRLDAPSIAFQLDHGQAKIILVDPEFSG 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ E + L S V+ DD + S RI + YE +A GDP F
Sbjct: 130 VISEALKLM---SGPKPFVIDVDDASYAGGS----RIGEIE----YEVAVAAGDPGFEPR 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
RP + D + ++YT GTT PKGVV ++ ++ AV +++ + + V LWTLPMFH N
Sbjct: 179 RPADEWDAIAMSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGGLGQHPVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR- 302
GW F W A NVCLRK D +F LI+ HGVTHMCGAPIV N+L ++P+A + R
Sbjct: 239 GWCFPWTMAAAAGINVCLRKVDPTKIFELIKTHGVTHMCGAPIVYNVLINAPDAPKGKRE 298
Query: 303 -PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV L AG+ PP VL E++G ++H YG TE+ G CA +P W+ LP ERA L
Sbjct: 299 TPVIGLIAGAAPPVAVLEGAENIGIKLTHVYGLTEVYGPASVCAEQPGWDDLPPAERAQL 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K RQGV V +++PET V RDG+T GE++ RG +M GYLK+ +AT G
Sbjct: 359 KRRQGVPYPLQEAVTVLNPETMQEVPRDGETIGEVMFRGNIVMKGYLKNEKATQDAFAGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++ GY+ IKDRSKD+IISGGENISS E+E +LY HP V AAVV +PDP
Sbjct: 419 WFHTGDLGVLDAHGYVIIKDRSKDIIISGGENISSVEVEDILYKHPAVLFAAVVAKPDPK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAF+ LK G + TE +II YCR+ + + PK VVF +PKT+TGK+QK
Sbjct: 479 WGEVPCAFIELKDGAQA-----TEAEIIAYCRSHMSGFKTPKVVVF-GPIPKTSTGKIQK 532
Query: 542 YVLGDIANS 550
++L + NS
Sbjct: 533 FLLRNEVNS 541
>gi|384260474|ref|YP_005415660.1| AMP-dependent synthetase and ligase [Rhodospirillum photometricum
DSM 122]
gi|378401574|emb|CCG06690.1| AMP-dependent synthetase and ligase [Rhodospirillum photometricum
DSM 122]
Length = 640
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/543 (44%), Positives = 337/543 (62%), Gaps = 19/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ PAN PLTPLG+++RAA ++++ YTW++T R +L S+L+ G+
Sbjct: 106 LERTPANYVPLTPLGYLDRAAQTYPTRLAVVHGARRYTWAETRERARRLGSALAGLGVGV 165
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ N P +YE HF VPM+GA+ N +N RL+A I+ IL H E++++ D S+
Sbjct: 166 GDTVAVMGANTPELYEAHFGVPMTGAVLNALNVRLNAEEIAFILNHGEARVLLTDTEFSA 225
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L E + L + P V+ D E + + R+ D YE+ LA GDP +S
Sbjct: 226 TLREALPLV----ERPLTVIDIVDSEYTGAGE---RLGQTD----YESFLASGDPTYSGR 274
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ + A+ ++I W +P+ +V LWTLPMFH N
Sbjct: 275 WPDDEWDAIALNYTSGTTGNPKGVVYHHRGAALNALSNIITWGMPQGAVYLWTLPMFHCN 334
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLD 301
GW F W A V TNVCLR+ A T+F I + VTH CGAPIVL L +S + + D
Sbjct: 335 GWCFPWTMAAVIGTNVCLRRVSAATIFKAIAEEKVTHFCGAPIVLGFLINASVQDRRTFD 394
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V ++TA +PPPA VL R + GF+V+H YG TE G + C WK +WN LP E+A L
Sbjct: 395 HTVNVMTAAAPPPAVVLERMQREGFLVTHVYGLTETYGPSTVCFWKDEWNDLPIDEQARL 454
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR + + + DPET DG+T GE+ RG M GYLK+PEAT++ + G
Sbjct: 455 KARQGVRYVAQDGLMVADPETLEPAPADGETMGEVFFRGNITMKGYLKNPEATTESFRGG 514
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++HPDGY+++KDRSKD+IISGGENISS E+ES L+ HP V AAVV +PD
Sbjct: 515 WFHTGDLGVLHPDGYIQLKDRSKDIIISGGENISSIEVESALHRHPDVVSAAVVAKPDEK 574
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P A++ L+ G TE ++I +CR + Y P+ ++F LPKT+TGK+QK
Sbjct: 575 WGETPRAYIELRDGA-----TVTEAELIAFCREALAHYKCPREIIF-GPLPKTSTGKIQK 628
Query: 542 YVL 544
++L
Sbjct: 629 FIL 631
>gi|193076378|gb|ABO11042.2| putative AMP-dependent synthetase/ligase [Acinetobacter baumannii
ATCC 17978]
Length = 542
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/553 (44%), Positives = 345/553 (62%), Gaps = 22/553 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L PAN L+PL ++ERAA D SII+ + +W QTY+RC Q AS L GI
Sbjct: 6 NELPRTPANFVALSPLRYLERAAYIYPDQASIIHGNRQISWKQTYQRCRQFASQLQQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 TKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D+E + F+ + YE +A+GD
Sbjct: 126 VNLAREALSLIPNQHI---IVIDVADEEYEGENQ---------FLGSFEYEEWIAQGDAN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FEWHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI KH V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGAPIVLSMIINLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++ V ++ AG+ PP V+ ++G V+H YG TE G + CA + W+ L E
Sbjct: 294 PIIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSITE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + ++DPET V DG+T GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPKATEEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LKTG T ++II++C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDERWQEVPCAFIELKTGAS-----VTPEEIIEHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIANS 550
K+QK++L + A
Sbjct: 528 KLQKFILREWAKE 540
>gi|184156914|ref|YP_001845253.1| acyl-CoA synthetase [Acinetobacter baumannii ACICU]
gi|332874009|ref|ZP_08441944.1| CoA ligase [Acinetobacter baumannii 6014059]
gi|384130590|ref|YP_005513202.1| Putative AMP-dependent synthetase/ligase [Acinetobacter baumannii
1656-2]
gi|384141874|ref|YP_005524584.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii MDR-ZJ06]
gi|385236182|ref|YP_005797521.1| acyl-CoA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|387125172|ref|YP_006291054.1| acyl-CoA synthetase [Acinetobacter baumannii MDR-TJ]
gi|407931518|ref|YP_006847161.1| acyl-CoA synthetase [Acinetobacter baumannii TYTH-1]
gi|416146691|ref|ZP_11601354.1| acyl-CoA synthetase [Acinetobacter baumannii AB210]
gi|417548789|ref|ZP_12199870.1| AMP-binding enzyme [Acinetobacter baumannii Naval-18]
gi|417564663|ref|ZP_12215537.1| AMP-binding enzyme [Acinetobacter baumannii OIFC143]
gi|417570653|ref|ZP_12221510.1| AMP-binding enzyme [Acinetobacter baumannii OIFC189]
gi|417577381|ref|ZP_12228226.1| long-chain-fatty-acid--CoA ligase [Acinetobacter baumannii
Naval-17]
gi|417871225|ref|ZP_12516168.1| acyl-CoA synthetase [Acinetobacter baumannii ABNIH1]
gi|417875895|ref|ZP_12520695.1| acyl-CoA synthetase [Acinetobacter baumannii ABNIH2]
gi|417879611|ref|ZP_12524168.1| acyl-CoA synthetase [Acinetobacter baumannii ABNIH3]
gi|417882301|ref|ZP_12526603.1| acyl-CoA synthetase [Acinetobacter baumannii ABNIH4]
gi|421201774|ref|ZP_15658929.1| acyl-CoA synthetase [Acinetobacter baumannii AC12]
gi|421535300|ref|ZP_15981562.1| acyl-CoA synthetase [Acinetobacter baumannii AC30]
gi|421630546|ref|ZP_16071249.1| AMP-binding enzyme [Acinetobacter baumannii OIFC180]
gi|421656339|ref|ZP_16096647.1| AMP-binding enzyme [Acinetobacter baumannii Naval-72]
gi|421662306|ref|ZP_16102474.1| AMP-binding enzyme [Acinetobacter baumannii OIFC110]
gi|421688401|ref|ZP_16128101.1| AMP-binding enzyme [Acinetobacter baumannii IS-143]
gi|421693906|ref|ZP_16133538.1| AMP-binding enzyme [Acinetobacter baumannii WC-692]
gi|421702319|ref|ZP_16141803.1| acyl-CoA synthetase [Acinetobacter baumannii ZWS1122]
gi|421706058|ref|ZP_16145478.1| acyl-CoA synthetase [Acinetobacter baumannii ZWS1219]
gi|421791490|ref|ZP_16227666.1| AMP-binding enzyme [Acinetobacter baumannii Naval-2]
gi|424053657|ref|ZP_17791188.1| hypothetical protein W9G_02849 [Acinetobacter baumannii Ab11111]
gi|424064594|ref|ZP_17802078.1| hypothetical protein W9M_02583 [Acinetobacter baumannii Ab44444]
gi|425753778|ref|ZP_18871646.1| AMP-binding enzyme [Acinetobacter baumannii Naval-113]
gi|445465138|ref|ZP_21449916.1| AMP-binding enzyme [Acinetobacter baumannii OIFC338]
gi|445481403|ref|ZP_21455847.1| AMP-binding enzyme / PF13193 domain multi-domain protein
[Acinetobacter baumannii Naval-78]
gi|183208508|gb|ACC55906.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii ACICU]
gi|322506810|gb|ADX02264.1| Putative AMP-dependent synthetase/ligase [Acinetobacter baumannii
1656-2]
gi|323516679|gb|ADX91060.1| acyl-CoA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|332737750|gb|EGJ68642.1| CoA ligase [Acinetobacter baumannii 6014059]
gi|333366072|gb|EGK48086.1| acyl-CoA synthetase [Acinetobacter baumannii AB210]
gi|342224511|gb|EGT89541.1| acyl-CoA synthetase [Acinetobacter baumannii ABNIH2]
gi|342226046|gb|EGT91022.1| acyl-CoA synthetase [Acinetobacter baumannii ABNIH1]
gi|342227709|gb|EGT92622.1| acyl-CoA synthetase [Acinetobacter baumannii ABNIH3]
gi|342238042|gb|EGU02484.1| acyl-CoA synthetase [Acinetobacter baumannii ABNIH4]
gi|347592367|gb|AEP05088.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii MDR-ZJ06]
gi|385879664|gb|AFI96759.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii MDR-TJ]
gi|395551101|gb|EJG17110.1| AMP-binding enzyme [Acinetobacter baumannii OIFC189]
gi|395556419|gb|EJG22420.1| AMP-binding enzyme [Acinetobacter baumannii OIFC143]
gi|395570602|gb|EJG31264.1| long-chain-fatty-acid--CoA ligase [Acinetobacter baumannii
Naval-17]
gi|398328659|gb|EJN44782.1| acyl-CoA synthetase [Acinetobacter baumannii AC12]
gi|400389088|gb|EJP52160.1| AMP-binding enzyme [Acinetobacter baumannii Naval-18]
gi|404561144|gb|EKA66380.1| AMP-binding enzyme [Acinetobacter baumannii IS-143]
gi|404569745|gb|EKA74830.1| AMP-binding enzyme [Acinetobacter baumannii WC-692]
gi|404667143|gb|EKB35064.1| hypothetical protein W9G_02849 [Acinetobacter baumannii Ab11111]
gi|404672677|gb|EKB40481.1| hypothetical protein W9M_02583 [Acinetobacter baumannii Ab44444]
gi|407194491|gb|EKE65631.1| acyl-CoA synthetase [Acinetobacter baumannii ZWS1122]
gi|407194693|gb|EKE65830.1| acyl-CoA synthetase [Acinetobacter baumannii ZWS1219]
gi|407900099|gb|AFU36930.1| acyl-CoA synthetase [Acinetobacter baumannii TYTH-1]
gi|408505728|gb|EKK07447.1| AMP-binding enzyme [Acinetobacter baumannii Naval-72]
gi|408697399|gb|EKL42913.1| AMP-binding enzyme [Acinetobacter baumannii OIFC180]
gi|408715109|gb|EKL60239.1| AMP-binding enzyme [Acinetobacter baumannii OIFC110]
gi|409986853|gb|EKO43044.1| acyl-CoA synthetase [Acinetobacter baumannii AC30]
gi|410402995|gb|EKP55098.1| AMP-binding enzyme [Acinetobacter baumannii Naval-2]
gi|425497672|gb|EKU63777.1| AMP-binding enzyme [Acinetobacter baumannii Naval-113]
gi|444770195|gb|ELW94352.1| AMP-binding enzyme / PF13193 domain multi-domain protein
[Acinetobacter baumannii Naval-78]
gi|444779270|gb|ELX03264.1| AMP-binding enzyme [Acinetobacter baumannii OIFC338]
Length = 542
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/553 (44%), Positives = 345/553 (62%), Gaps = 22/553 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L PAN L+PL ++ERAA D SII+ + +W QTY+RC Q AS L GI
Sbjct: 6 NELPRTPANFVALSPLRYLERAAYIYPDQASIIHGNRQISWKQTYQRCRQFASQLQQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 VKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D+E + F+ + YE LA+GD
Sbjct: 126 VNLAREALSLIPNQHI---IVIDVADEEYEGENQ---------FLGSFEYEEWLAQGDAN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI KH V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGAPIVLSMIINLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++ V ++ AG+ PP V+ ++G V+H YG TE G + CA + W+ L E
Sbjct: 294 PSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSITE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + ++DPET V DG+T GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPKATEEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LKTG T ++II++C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDERWQEVPCAFIELKTGAS-----VTPEEIIEHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIANS 550
K+QK++L + A
Sbjct: 528 KLQKFILREWAKE 540
>gi|421625754|ref|ZP_16066600.1| AMP-binding enzyme [Acinetobacter baumannii OIFC098]
gi|408697848|gb|EKL43354.1| AMP-binding enzyme [Acinetobacter baumannii OIFC098]
Length = 542
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/553 (44%), Positives = 345/553 (62%), Gaps = 22/553 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L PAN L+PL ++ERAA D SII+ + +W QTY+RC Q AS L GI
Sbjct: 6 NELPRTPANFVALSPLRYLERAAYIYPDQASIIHGNRQISWKQTYQRCRQFASQLQQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 VKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D+E + F+ + YE LA+GD
Sbjct: 126 VNLAREALSLIPNQHI---IVIDVADEEYEGENQ---------FLGSFEYEEWLAQGDAN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI KH V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGAPIVLSMIINLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++ V ++ AG+ PP V+ ++G V+H YG TE G + CA + W+ L E
Sbjct: 294 PSIEHHVEVMVAGAAPPVTVIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSITE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + ++DPET V DG+T GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPKATEEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LKTG T ++II++C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDERWQEVPCAFIELKTGAS-----VTPEEIIEHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIANS 550
K+QK++L + A
Sbjct: 528 KLQKFILREWAKE 540
>gi|403673157|ref|ZP_10935460.1| acyl-CoA synthetase [Acinetobacter sp. NCTC 10304]
gi|417546031|ref|ZP_12197117.1| AMP-binding enzyme [Acinetobacter baumannii OIFC032]
gi|421652004|ref|ZP_16092369.1| AMP-binding enzyme [Acinetobacter baumannii OIFC0162]
gi|421666158|ref|ZP_16106250.1| AMP-binding enzyme [Acinetobacter baumannii OIFC087]
gi|421671183|ref|ZP_16111165.1| AMP-binding enzyme [Acinetobacter baumannii OIFC099]
gi|424061123|ref|ZP_17798613.1| hypothetical protein W9K_02236 [Acinetobacter baumannii Ab33333]
gi|425747297|ref|ZP_18865307.1| AMP-binding enzyme [Acinetobacter baumannii WC-348]
gi|445459599|ref|ZP_21447622.1| AMP-binding enzyme [Acinetobacter baumannii OIFC047]
gi|400383919|gb|EJP42597.1| AMP-binding enzyme [Acinetobacter baumannii OIFC032]
gi|404666805|gb|EKB34735.1| hypothetical protein W9K_02236 [Acinetobacter baumannii Ab33333]
gi|408507125|gb|EKK08827.1| AMP-binding enzyme [Acinetobacter baumannii OIFC0162]
gi|410383480|gb|EKP36013.1| AMP-binding enzyme [Acinetobacter baumannii OIFC099]
gi|410388083|gb|EKP40522.1| AMP-binding enzyme [Acinetobacter baumannii OIFC087]
gi|425494185|gb|EKU60400.1| AMP-binding enzyme [Acinetobacter baumannii WC-348]
gi|444773793|gb|ELW97884.1| AMP-binding enzyme [Acinetobacter baumannii OIFC047]
Length = 542
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/553 (44%), Positives = 345/553 (62%), Gaps = 22/553 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L PAN L+PL ++ERAA D SII+ + +W QTY+RC Q AS L GI
Sbjct: 6 NELPRTPANFVALSPLRYLERAAYIYPDQASIIHGNRQISWKQTYQRCRQFASQLQQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 VKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D+E + F+ + YE LA+GD
Sbjct: 126 VNLAREALSLIPNQHI---IVIDVADEEYKGENQ---------FLGSFEYEEWLAQGDAN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI KH V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGAPIVLSMIINLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++ V ++ AG+ PP V+ ++G V+H YG TE G + CA + W+ L E
Sbjct: 294 PSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSITE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + ++DPET V DG+T GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPKATEEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LKTG T ++II++C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDERWQEVPCAFIELKTGAS-----VTPEEIIEHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIANS 550
K+QK++L + A
Sbjct: 528 KLQKFILREWAKE 540
>gi|421789508|ref|ZP_16225766.1| AMP-binding enzyme [Acinetobacter baumannii Naval-82]
gi|410398639|gb|EKP50850.1| AMP-binding enzyme [Acinetobacter baumannii Naval-82]
Length = 542
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/553 (44%), Positives = 345/553 (62%), Gaps = 22/553 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L PAN L+PL ++ERAA D SII+ + +W QTY+RC Q AS L GI
Sbjct: 6 NELPRTPANFVALSPLRYLERAAYIYPDQASIIHGNRQISWRQTYQRCRQFASQLQQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 VKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D+E + F+ + YE LA+GD
Sbjct: 126 VNLAREALSLIPNQHI---IVIDVADEEYEGENQ---------FLGSFEYEEWLAQGDAN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI KH V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGAPIVLSMIINLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++ V ++ AG+ PP V+ ++G V+H YG TE G + CA + W+ L E
Sbjct: 294 PSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSITE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + ++DPET V DG+T GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPKATEEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LKTG T ++II++C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDERWQEVPCAFIELKTGAS-----VTPEEIIEHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIANS 550
K+QK++L + A
Sbjct: 528 KLQKFILREWAKE 540
>gi|114705007|ref|ZP_01437915.1| acyl-CoA synthase [Fulvimarina pelagi HTCC2506]
gi|114539792|gb|EAU42912.1| acyl-CoA synthase [Fulvimarina pelagi HTCC2506]
Length = 542
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 249/547 (45%), Positives = 344/547 (62%), Gaps = 23/547 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN L+P+ FIERAA+ + ++++ TW +T+ R ++A++L GI PG VS
Sbjct: 15 ANYVQLSPIAFIERAASVYPNYTAVVHGKIRRTWGETFNRVKKMANALKKRGIGPGKTVS 74
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
VI N P M+ELHFAVPM+G + NTINTRLDA T+ IL H+E+ + VD + +
Sbjct: 75 VILANTPEMFELHFAVPMTGGVLNTINTRLDAATVGFILNHAEADIFMVDPEFADVAKGA 134
Query: 129 VSLFPPHSKTPKLVLITD--DKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK 186
V K + +L+ D D+ + P + TY+++LA+GD + +P
Sbjct: 135 VE------KAGRELLVVDVPDEMYEGDNGPIGAM-------TYDDLLAEGDADAEYWKPD 181
Query: 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
+ + LNYT GTT PKGVV ++ ++ A+ + DW + V LWTLPMFH NGW
Sbjct: 182 DEWSAISLNYTSGTTGDPKGVVYHHRGAYLNALSNAHDWGIKPHPVYLWTLPMFHCNGWC 241
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLDRPV 304
+ W A + T VCLR + LIR+ VTH CGAPIVLN L+S+P+ K L P+
Sbjct: 242 YCWTLAALAGTAVCLRAVREKPILDLIRQEKVTHFCGAPIVLNTLASAPDELKKDLPSPI 301
Query: 305 RILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
+TA +PPPA V+ R E++G V+H YG TE G V CAWK +W+ LP ERA++KAR
Sbjct: 302 YAMTAAAPPPAAVIKRVEAMGISVTHAYGLTETYGPAVVCAWKSEWDSLPDDERAAMKAR 361
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYY 424
QGVR L ++ + DP+T V +DG+T GEI G ++M GYLK+PEA K +++G +
Sbjct: 362 QGVRYTVLDDIMVADPDTMKPVPKDGETIGEIFFSGNNVMKGYLKNPEANKKSLRNGWFA 421
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
+GD+ +MH D Y+EIKDRSKD+IISGGENISS EIE VLY H + EAAVV RPD W E
Sbjct: 422 SGDLAVMHEDNYIEIKDRSKDIIISGGENISSIEIEGVLYKHDKIAEAAVVARPDEKWGE 481
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
PCAFV L+ G TE+++I+YC+ + R+ PKTV+F DELPKT+TGK+QK+VL
Sbjct: 482 TPCAFVVLRQGE-----TMTEEEVIEYCKENMARFKAPKTVIF-DELPKTSTGKIQKFVL 535
Query: 545 GDIANSM 551
A ++
Sbjct: 536 RKKAEAL 542
>gi|357120833|ref|XP_003562129.1| PREDICTED: LOW QUALITY PROTEIN: medium-chain-fatty-acid--CoA
ligase-like [Brachypodium distachyon]
Length = 556
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 254/553 (45%), Positives = 351/553 (63%), Gaps = 28/553 (5%)
Query: 6 PNPANSCPLTPLGFIERAATACDDCPSI-IYNDTTYTWSQTYRRCLQLASSLSS-FGINP 63
P AN PLTPL FIERAA ++ + D +TW + RC+++A++L++ G+N
Sbjct: 8 PCAANYAPLTPLSFIERAAAVYGGRTAVGLRGDARHTWKEARDRCVRVAAALATRLGVNR 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
VV+V++PN+PAMYELHFAVPM+GA+ T+NTR DA +S +LKHS SK+ FV+ SS
Sbjct: 68 RDVVAVLSPNVPAMYELHFAVPMAGAVLCTLNTRHDAAMVSALLKHSGSKVFFVE---SS 124
Query: 124 LL------LEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD 177
LL L ++ + P LV I+D+ SS D+ YE+++
Sbjct: 125 LLDVAKGALRRITDQLGTTSLPVLVTISDETNAGDSSR-------RDY--EYEDLIKYAP 175
Query: 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
F P ++ DP+ LNYT GTTS PKGV+ ++ ++ + +++ + + LWT+
Sbjct: 176 SGFDIRWPVNEPDPITLNYTSGTTSRPKGVIYNHRGAYLNTIATVLAYDITTMLTYLWTV 235
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP-- 295
PMFH NGW+ WG A+ G TN+CL F A +F I +H V+HM GAP VLN++ S+P
Sbjct: 236 PMFHGNGWNLPWGVAMQGGTNICLHHFTAKVIFNNIARHRVSHMGGAPTVLNMIISAPTG 295
Query: 296 EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
+ K L +R++T G+PPP V E LGF+V H YG TE G W P+W+ LPA
Sbjct: 296 DRKPLPXGLRVMTGGAPPPPRVFNEMEDLGFVVYHVYGLTETCGAATVRTWMPEWDALPA 355
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
ERA LKARQG + I + ++D+ + +T S DGQT GE++ RG ++M GY KD +AT
Sbjct: 356 HERALLKARQGFQHIAIQDIDVKNSKTMESQPYDGQTVGEVMFRGNTIMSGYYKDIDATK 415
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
+ M G +TGD+ + PDG ++IKDR+KD+IISGGENISST +ESV+ +HP V EA+VV
Sbjct: 416 ESMAGGWLHTGDLAVRQPDGCIQIKDRAKDIIISGGENISSTVVESVISNHPAVLEASVV 475
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
RPD W E PCAFV LK GT TE +II +CR R+P YM PKTVVF ++LPKT+
Sbjct: 476 ARPDDHWGETPCAFVKLKNGTS-----VTEAEIIGFCRDRLPHYMAPKTVVF-EDLPKTS 529
Query: 536 TGKVQKYVLGDIA 548
TGK QK+VLG+ A
Sbjct: 530 TGKTQKFVLGERA 542
>gi|456355422|dbj|BAM89867.1| putative AMP-binding enzyme [Agromonas oligotrophica S58]
Length = 547
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 251/549 (45%), Positives = 342/549 (62%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PLTPL F+ R+A D S +Y +++W QTY RC + AS L+ GI
Sbjct: 10 LDKTPANYVPLTPLSFLARSAAVYPDHVSTVYEGRSFSWRQTYERCRRFASYLAGRGIGV 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM E HFAVPM+GA+ NT+N RLDA +I+ L H +++++ VD S
Sbjct: 70 GDTVAAMLPNIPAMNEAHFAVPMAGAVLNTLNIRLDAPSIAFQLDHGQARIILVDPEFSG 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ E + L S V+ DD + S RI + YE +A GDP F
Sbjct: 130 VISEALKLM---SGPKPFVIDVDDASYAGGS----RIGEIE----YEAAVASGDPAFEPR 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
RP + D + ++YT GTT PKGVV ++ ++ AV +++ + + V LWTLPMFH N
Sbjct: 179 RPTDEWDAIAMSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGGLGQHPVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW F W A NVCLRK + +F LI+ H VTHMCGAPIV N+L ++P+A + +
Sbjct: 239 GWCFPWTMAAAAGVNVCLRKVEPTKIFELIKAHRVTHMCGAPIVYNVLINAPDAPKGKRE 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+PV L AG+ PP VL ES+G ++H YG TE+ G CA +P W+ LPA ERA L
Sbjct: 299 KPVVGLIAGAAPPVAVLEGAESIGIKLTHVYGLTEVYGPASVCAEQPGWDDLPAPERARL 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K RQGV V ++DPET V RDG+T GE++ RG +M GYLK+ +AT++ G
Sbjct: 359 KRRQGVPYPLQEAVTVLDPETMQEVPRDGETIGEVMFRGNIVMKGYLKNEKATAEAFAGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++ GY+ IKDRSKD+IISGGENISS E+E +LY HP V AAVV +PDP
Sbjct: 419 WFHTGDLGVLDEHGYVIIKDRSKDIIISGGENISSVEVEDILYKHPAVLFAAVVAKPDPK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK G + TE +II YCR+ + + PKT+VF +PKT+TGK+QK
Sbjct: 479 WGEVPCAFVELKDGAQA-----TEAEIIAYCRSHMSGFKTPKTIVF-GPIPKTSTGKIQK 532
Query: 542 YVLGDIANS 550
++L + +S
Sbjct: 533 FLLRNQVDS 541
>gi|445451424|ref|ZP_21444777.1| AMP-binding enzyme [Acinetobacter baumannii WC-A-92]
gi|444755095|gb|ELW79688.1| AMP-binding enzyme [Acinetobacter baumannii WC-A-92]
Length = 542
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/553 (44%), Positives = 345/553 (62%), Gaps = 22/553 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L PAN L+PL ++ERAA D SII+ + +W QTY+RC Q AS L GI
Sbjct: 6 NELPRTPANFVALSPLRYLERAAYIYPDQASIIHGNRQISWKQTYQRCRQFASQLQQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 VKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D+E + F+ + YE LA+GD
Sbjct: 126 LNLAREALSLIPNQHI---IVIDVADEEYKGENQ---------FLGSFEYEEWLAQGDAN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI KH V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGAPIVLSMIINLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++ + ++ AG+ PP V+ ++G V+H YG TE G + CA + W+ L E
Sbjct: 294 PSIEHHIEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSITE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + ++DPET V DG+T GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPKATEEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LKTG T ++II++C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDERWQEVPCAFIELKTGAS-----VTPEEIIEHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIANS 550
K+QK++L + A
Sbjct: 528 KLQKFILREWAKE 540
>gi|445486266|ref|ZP_21457324.1| AMP-binding enzyme [Acinetobacter baumannii AA-014]
gi|444769751|gb|ELW93919.1| AMP-binding enzyme [Acinetobacter baumannii AA-014]
Length = 542
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/553 (44%), Positives = 345/553 (62%), Gaps = 22/553 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L PAN L+PL ++ERAA D SII+ + +W QTY+RC Q AS L GI
Sbjct: 6 NELPRTPANFVALSPLRYLERAAYIYPDQASIIHGNRQISWKQTYQRCRQFASQLQQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 VKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D+E + F+ + YE LA+GD
Sbjct: 126 VNLAREALSLIPNQHI---IVIDVADEEYEGENQ---------FLGSFEYEEWLAQGDAN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI KH V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGAPIVLSMIINLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++ V ++ AG+ PP V+ ++G V+H YG TE G + CA + W+ L E
Sbjct: 294 PSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSITE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + ++DPET V DG+T GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLYSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPKATEEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LKTG T ++II++C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDERWQEVPCAFIELKTGAS-----VTPEEIIEHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIANS 550
K+QK++L + A
Sbjct: 528 KLQKFILREWAKE 540
>gi|399154433|ref|ZP_10754500.1| acyl-CoA synthetase [gamma proteobacterium SCGC AAA007-O20]
Length = 537
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/544 (45%), Positives = 342/544 (62%), Gaps = 20/544 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
+ NPAN PLTP+ F+ R A S+IY + YTWS++ RC+++ASSL+S G+ P
Sbjct: 1 MNKNPANFVPLTPISFLHRTADVYGQNTSVIYENRIYTWSESRERCVRIASSLNSHGVMP 60
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VSV+A N P M+E HF++PM+GA+ N+IN RLDA TI+ IL S +K++ VD
Sbjct: 61 GDTVSVLAFNTPEMFESHFSIPMAGAVLNSINVRLDAGTIAHILNDSNAKILLVDRE--- 117
Query: 124 LLLEVVS-LFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
L EV S S PK+VLI D + + S P + YE+++ GDP F W
Sbjct: 118 -LFEVASDALSISSSNPKVVLIND---VFAESKPNV----TENTIEYESLVENGDPSFKW 169
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
+P + P+ LNYT GTT PKGVV ++ +++++ ++I W +P V L+++PMFH
Sbjct: 170 QKPDDEWQPLSLNYTSGTTGQPKGVVYHHRGSYLMSMGTVIGWELPNHPVYLYSVPMFHC 229
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQL 300
NGW W A V T +CLR F VF L+ +H VTH GAPI+LN+L+++P+ K
Sbjct: 230 NGWGHAWTMAAVAGTVICLRAFSPEKVFDLLDRHKVTHFGGAPIMLNMLANAPKKIQKTF 289
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
DR ++++TAG+PPPA VL SLGF V H YG TE G + A + W A
Sbjct: 290 DREIKVMTAGAPPPAKVLESMMSLGFNVMHVYGLTETYGHILQAAPQTSWLSETPAGLAK 349
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
L +RQGVR +V ++D ETG V DG+T GEIV+R + M+GYL +P+AT + D
Sbjct: 350 LSSRQGVRFPMTEDVSVLDQETGEHVPPDGKTIGEIVIRCNTCMMGYLNNPQATKEVFAD 409
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
+++GD+ ++H DGY++IKDRSKD+IISGGENISS E+E+VLY HP V EAAVV PD
Sbjct: 410 DWFHSGDLAVIHNDGYIQIKDRSKDIIISGGENISSVEVENVLYQHPSVGEAAVVAMPDE 469
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV LK+ + +E ++I +C+ + + PK VVF LPKTATGK+Q
Sbjct: 470 TWGEVPCAFVELKS-----DQLVSENELIDFCKQNMATFKRPKKVVF-GPLPKTATGKIQ 523
Query: 541 KYVL 544
K+ L
Sbjct: 524 KHEL 527
>gi|358639292|dbj|BAL26589.1| acetyl-CoA synthetase [Azoarcus sp. KH32C]
Length = 546
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 254/552 (46%), Positives = 348/552 (63%), Gaps = 21/552 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PL+PL F+ER+A ++I+ D ++TW++ Y RC +LAS+L G+
Sbjct: 10 LGKNPANYVPLSPLSFLERSAYIYPKRVAVIHGDRSFTWAEHYERCRRLASALVQQGVKR 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PN+PAM E+HF VPM GA+ NT+NTRLDA I+ L H E+K++ D ++
Sbjct: 70 GDTVAVMLPNVPAMAEVHFGVPMVGAVLNTLNTRLDAEAIAFQLDHGEAKVLITDPEFAA 129
Query: 124 LLLEVVSLFPPHSKTPK-LVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ + L K PK LV+ T D E S+ R + YE++LA GDP+F+W
Sbjct: 130 IVSRALELM----KGPKPLVIDTLDPEYPSTE----RCGEIE----YEDLLAGGDPEFAW 177
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P + D + LNYT GTT PKGVV ++ ++ A ++I W +P+ +V LWTLPMFH
Sbjct: 178 SLPPDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNIISWGMPQHAVYLWTLPMFHC 237
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--L 300
NGW F W A NVCLRK D ++ LIRKH V+H+CGAPIV +L ++PE + +
Sbjct: 238 NGWCFPWTVAANAGVNVCLRKVDVALIYELIRKHKVSHLCGAPIVHGMLINAPEGMRAGI 297
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
D V L AG+ PPA ++ E +GF ++H YG TE G CA P+W+ LP RA
Sbjct: 298 DHKVSALIAGAAPPAAIIEGMERIGFDITHVYGLTETYGPAAVCAKHPEWDDLPIANRAE 357
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
RQGVR + +++PET V DG+T GE++ RG +M GYLK+ +AT +
Sbjct: 358 RNGRQGVRYHMQEAITVINPETMEPVPADGETMGEVMFRGNLVMKGYLKNEKATQEAFAG 417
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+G+M PDGY++IKDRSKDVIISGGENISS E+E VLY HP V AAVV +PDP
Sbjct: 418 GWFHTGDLGVMQPDGYVKIKDRSKDVIISGGENISSLEVEDVLYRHPAVMTAAVVAKPDP 477
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+P A++ +K G T +DII +CR + RY VPK + F LPKT+TGK+Q
Sbjct: 478 KWGEVPAAYIEIKEGAQ-----VTAEDIIAHCREHLARYKVPKYIEFC-VLPKTSTGKIQ 531
Query: 541 KYVLGDIANSMS 552
K+VL + A S S
Sbjct: 532 KFVLREQAKSAS 543
>gi|407364898|ref|ZP_11111430.1| acyl-CoA synthetase [Pseudomonas mandelii JR-1]
Length = 540
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/550 (44%), Positives = 338/550 (61%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P+ N L+PL FIER A+ P++I+ TW+QTY RC +LAS+L+ GI
Sbjct: 8 LGPSAVNHIALSPLSFIERTASVYPHYPAVIHGSIRRTWAQTYTRCRRLASALAGRGIGK 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V+V+ PNIP M E+HF VPM GA+ N +N RLDA I+ +L+H E+K++ D
Sbjct: 68 NDTVAVMLPNIPEMLEVHFGVPMIGAVLNPLNVRLDAEAIAFMLQHGEAKVLITDREFHD 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + P LV+ +D E + + D YE +LA+GDP ++W
Sbjct: 128 VIHAAIGML----DHPPLVIDVNDPEYGEGKA----VSDLD----YEALLAEGDPDYAWQ 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P ++ + LNYT GTT PKGVV ++ ++ ++ + + W + V LWTLPMFH N
Sbjct: 176 WPDNEWQAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNQMTWAMGNHPVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W + +V LR+ D + LIR+H +TH+C APIVLN L + PE+ + +D
Sbjct: 236 GWCYPWIITAMAGVHVFLRRVDPQKILTLIREHQITHLCAAPIVLNALVNMPESAKAAID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA V+ E +G V+H YG TE G CAW +W++LP ERA +
Sbjct: 296 HPVNAMVAGAAPPAKVIGAVEEMGIKVTHVYGLTETYGPVTLCAWHAEWDELPLDERAQI 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR L V + D +T RDGQT GEI MRG ++M GYLK+P AT++ + G
Sbjct: 356 KSRQGVRYPTLEGVMVGDSKTLEPTPRDGQTIGEIFMRGNTVMKGYLKNPTATAEAFEGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + HP+GY+EIKDR KD+IISGGENIS+ E+E VLY HP V EAAVV RPD
Sbjct: 416 WFHTGDLAVCHPNGYVEIKDRLKDIIISGGENISTIELEGVLYRHPGVMEAAVVARPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++LK E DII +CR + + VP+TV+F LPKT+TGK+QK
Sbjct: 476 WGETPCAFITLKADHQD----VREADIISFCREHLAGFKVPRTVIFT-LLPKTSTGKIQK 530
Query: 542 YVLGDIANSM 551
YVL D A ++
Sbjct: 531 YVLRDRAKAL 540
>gi|117621371|ref|YP_856708.1| AMP-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117562778|gb|ABK39726.1| AMP-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 540
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 244/545 (44%), Positives = 343/545 (62%), Gaps = 24/545 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ NPAN LTP+ F+ RAA D P++I+ +W+QT RRC QLAS+L GI
Sbjct: 11 LEKNPANYQALTPISFLGRAARVYPDYPALIHGPLRQSWAQTERRCCQLASALRRRGIGE 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS++APN PAM+E HF VPMSGA+ NTINTRLDA +++ I +H++SK+V VD +
Sbjct: 71 GDTVSIVAPNTPAMFEAHFGVPMSGAVLNTINTRLDAESMAFIFQHAQSKVVLVDREFGA 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQFS 181
L+ + ++L P L+ I D P + V YE LA+G
Sbjct: 131 LVQKALALV---ENQPLLIAIDD-----------PLYREGELVSDLDYEAFLAEGSGDEP 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
P+ + + LNYT GTT PKGVV ++ + AV++++ W +PK SV LWTLPMFH
Sbjct: 177 GWLPQDEWQAISLNYTSGTTGNPKGVVYHHRGAHLNAVNNVLSWELPKHSVYLWTLPMFH 236
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQ 299
NGW F W A ++CLR A ++ + +H V+H C APIVLN+L+++ A +
Sbjct: 237 CNGWCFPWTLAATAGVSICLRHVQAAAIYEALHEHKVSHFCAAPIVLNMLNNADPALKRG 296
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
LD P++++TAG+ PPA V+ E++G V+H YG TE G V C + W A +
Sbjct: 297 LDHPIKVMTAGAAPPATVIAGMEAMGIAVTHVYGLTETYGPCVLCEPQRSWQGQDATTLS 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKARQGV + E+ +++P +G V +DG+T GEIV+RG +M GYLK+P A+++ M
Sbjct: 357 RLKARQGVASPLQGEMRVINPVSGEPVPQDGKTMGEIVLRGNVVMKGYLKNPSASAEAMA 416
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
+G + +GD+ + HPDGY+EIKDRSKD+IISGGENISS E+E VLY HP V+E AV+ PD
Sbjct: 417 EGWFRSGDLAVWHPDGYVEIKDRSKDIIISGGENISSLEVEDVLYRHPDVDEVAVIAMPD 476
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+PCAFV LK G + T+ ++I +CR ++ + PK V+F LPKT+TGKV
Sbjct: 477 EKWGEVPCAFVKLKEGRE-----LTQAELIAFCREQMAHFKAPKRVIFTP-LPKTSTGKV 530
Query: 540 QKYVL 544
QK++L
Sbjct: 531 QKFML 535
>gi|299771536|ref|YP_003733562.1| acyl-CoA synthetase [Acinetobacter oleivorans DR1]
gi|298701624|gb|ADI92189.1| acyl-CoA synthetase [Acinetobacter oleivorans DR1]
Length = 545
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/551 (44%), Positives = 343/551 (62%), Gaps = 22/551 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L PAN L+PL ++ERAA + SII+ +W +TY+RC Q AS L GI
Sbjct: 6 DELPRTPANFVALSPLRYLERAAYIYPNQASIIHGKRQISWKETYQRCCQFASQLKQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PNIPAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+ESK++ VD
Sbjct: 66 EKNDTVSVLLPNIPAMVEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAESKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D E + F+ + YE +A+GD
Sbjct: 126 VNLAREALSLIPDQHI---IVIDVADDEYEGENQ---------FIGSFEYEEWIAQGDIN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FVWHLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI +H V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAEHKVDYFCGAPIVLSMIINLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
D V ++ AG+ PP ++ ++G V+H YG TE G + CA + WN+L E
Sbjct: 294 TNFDHHVEVMVAGAAPPVAIIEGMRNMGINVNHVYGLTETYGPSALCASQSGWNELSIAE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + +++PET V DGQT GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLNPETMQPVPNDGQTMGEIMFRGNIVMKGYLKNPQATQEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYRHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LK G + T ++II++C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDARWQEVPCAFIELKMGATA-----TPEEIIEHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIA 548
K+QK++L + A
Sbjct: 528 KLQKFILREWA 538
>gi|424056884|ref|ZP_17794401.1| hypothetical protein W9I_00210 [Acinetobacter nosocomialis Ab22222]
gi|425741607|ref|ZP_18859752.1| AMP-binding enzyme [Acinetobacter baumannii WC-487]
gi|407440417|gb|EKF46934.1| hypothetical protein W9I_00210 [Acinetobacter nosocomialis Ab22222]
gi|425492172|gb|EKU58442.1| AMP-binding enzyme [Acinetobacter baumannii WC-487]
Length = 542
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/553 (44%), Positives = 344/553 (62%), Gaps = 22/553 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L PAN L+PL ++ERAA D SII+ + +W +TY+RC Q AS L GI
Sbjct: 6 DELPRTPANFVALSPLRYLERAAYIYPDQASIIHGNRQISWKETYQRCRQFASQLQQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 TKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D+E + F+ + YE +A+GD
Sbjct: 126 VNLAREALSLIPNQHI---IVIDVADEEYEGENQ---------FLGSFEYEEWIAQGDAN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FEWHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI KH V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGAPIVLSMIINLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++ V ++ AG+ PP V+ ++G V+H YG TE G + CA + W+ L E
Sbjct: 294 PSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSITE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + ++DPET V DG+T GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPKATEEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LKTG T ++II +C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDERWQEVPCAFIELKTGA-----TVTPEEIIAHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIANS 550
K+QK++L + A
Sbjct: 528 KLQKFILREWAKE 540
>gi|239500702|ref|ZP_04660012.1| acyl-CoA synthetase [Acinetobacter baumannii AB900]
gi|421677635|ref|ZP_16117527.1| AMP-binding enzyme [Acinetobacter baumannii OIFC111]
gi|410393391|gb|EKP45745.1| AMP-binding enzyme [Acinetobacter baumannii OIFC111]
Length = 542
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/553 (44%), Positives = 344/553 (62%), Gaps = 22/553 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L PAN L+PL ++ERAA D SII+ + +W QTY+RC Q AS L GI
Sbjct: 6 NELPRTPANFVALSPLRYLERAAYIYPDQASIIHGNRQISWKQTYQRCRQFASQLQQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLD +TI+ +L+H+E+K++ VD
Sbjct: 66 VKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDTKTIAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D+E + F+ + YE LA+GD
Sbjct: 126 VNLAREALSLIPNQHI---IVIDVADEEYEGENQ---------FLGSFEYEEWLAQGDAN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI KH V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGAPIVLSMIINLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++ V ++ AG+ PP V+ ++G V+H YG TE G + CA + W+ L E
Sbjct: 294 PSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSITE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + ++DPET V DG+T GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPKATEEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LKTG T ++II++C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDERWQEVPCAFIELKTGAS-----VTPEEIIEHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIANS 550
K+QK++L + A
Sbjct: 528 KLQKFILREWAKE 540
>gi|262281008|ref|ZP_06058791.1| acyl-CoA synthetase /AMP-acid ligase II [Acinetobacter
calcoaceticus RUH2202]
gi|262257908|gb|EEY76643.1| acyl-CoA synthetase /AMP-acid ligase II [Acinetobacter
calcoaceticus RUH2202]
Length = 545
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 248/553 (44%), Positives = 342/553 (61%), Gaps = 22/553 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L PAN L+PL ++ERAA + SII+ +W +TY+RC Q AS L GI
Sbjct: 6 DELPRTPANFVALSPLRYLERAAYIYPNHASIIHGKRQISWKETYQRCCQFASQLKQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+ESK++ VD
Sbjct: 66 EKNDTVSVLLPNVPAMIEAHFAVPMTGAVLNTLNTRLDAKTIAFMLEHAESKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D E + F+ + YE +A+GD
Sbjct: 126 VNLAREALSLIPDQHI---IVIDVADDEYEGENQ---------FIGSFEYEEWIAQGDIN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P+ + D + L+YT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FVWHLPEDEWDAISLSYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI KH V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGAPIVLSMIINLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
D V ++ AG+ PP ++ ++G V+H YG TE G + CA + WN+L E
Sbjct: 294 TDFDHHVEVMVAGAAPPVAIIEGMRNMGISVNHVYGLTETYGPSALCASQSGWNELSIAE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + ++DPET V DGQT GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGQTMGEIMFRGNIVMKGYLKNPKATQEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS EIE VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEIEDVLYRHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LK G + T ++II +C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDARWQEVPCAFIELKMGATA-----TPEEIIAHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIANS 550
K+QK++L + A
Sbjct: 528 KLQKFILREWAKE 540
>gi|445439653|ref|ZP_21441778.1| AMP-binding enzyme [Acinetobacter baumannii OIFC021]
gi|444751885|gb|ELW76583.1| AMP-binding enzyme [Acinetobacter baumannii OIFC021]
Length = 542
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/553 (44%), Positives = 343/553 (62%), Gaps = 22/553 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L PAN L+PL ++ERAA D SII+ + +W +TY+RC Q AS L GI
Sbjct: 6 DELPRTPANFVALSPLRYLERAAYIYPDQASIIHGNRQISWKETYQRCRQFASQLQQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+N+RLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 TKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNSRLDAKTIAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D+E + F+ + YE +A+GD
Sbjct: 126 VNLAREALSLIPNQHI---IVIDVADEEYEGENQ---------FLGSFEYEEWIAQGDAN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FEWHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI KH V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGAPIVLSMIINLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
+ V ++ AG+ PP V+ ++G V+H YG TE G + CA + W+ L E
Sbjct: 294 PSIKHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSITE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + ++DPET V DG+T GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPKATEEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LKTG T ++II +C+ + R+ VPK VV I E+PKTATG
Sbjct: 474 PDERWQEVPCAFIELKTGA-----TVTPEEIIAHCQKELARFKVPKDVV-ITEIPKTATG 527
Query: 538 KVQKYVLGDIANS 550
K+QK++L + A
Sbjct: 528 KLQKFILREWAKE 540
>gi|145299087|ref|YP_001141928.1| acyl-CoA synthetase/AMP-acid ligase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418357552|ref|ZP_12960244.1| acyl-CoA synthetase/AMP-acid ligase [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|142851859|gb|ABO90180.1| acyl-CoA synthetase/AMP-acid ligase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356689141|gb|EHI53687.1| acyl-CoA synthetase/AMP-acid ligase [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 540
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/545 (44%), Positives = 346/545 (63%), Gaps = 24/545 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L +PAN LTP+ F+ RAA D P++I+ W+QT RRC QLAS+L GI
Sbjct: 11 LDKSPANFEALTPISFLARAARVYPDYPALIHGALRQNWAQTERRCRQLASALRRHGIGE 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS++APN PAM+E HF VPMSGA+ NT+NTRLDA +++ I +H++S++V VD +
Sbjct: 71 GDTVSIVAPNTPAMFEAHFGVPMSGAVLNTLNTRLDAESMAFIFQHAQSRVVLVDREFGA 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQFS 181
++ + ++L KT L++ DD P + + YE LA+G+
Sbjct: 131 VVRKALALV----KTQPLLIAIDD----------PLYREGELISELDYEQFLAQGNGDEP 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
P + + LNYT GTT PKGVV ++ + A+++++ W +PK SV LWTLPMFH
Sbjct: 177 CWLPDDEWQAISLNYTSGTTGNPKGVVYHHRGAHLNAINNVLSWELPKHSVYLWTLPMFH 236
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A +VCLR A +F +R+H +H C APIVLN+L+++ A +
Sbjct: 237 CNGWCFPWTLAATAGVSVCLRHVQARAIFDALREHKASHFCAAPIVLNMLNNADPALKYG 296
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L+ P++++TAG+ PPA V+ E++G V+H YG TE G V C + W A +
Sbjct: 297 LNHPIKVMTAGAAPPATVIAGMEAMGIAVTHVYGLTETYGPCVLCEPQRSWQGQDATALS 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKARQGV + E+ +++P +G SV +DG+T GEIV+RG +M GYLK+P+A+++ M
Sbjct: 357 RLKARQGVASPLQGEMRVINPVSGESVPQDGKTLGEIVLRGNVVMKGYLKNPDASAEAMA 416
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
+G + +GD+ + HPDGY+E+KDRSKD+IISGGENISS E+E VLY HP V+E AV+ PD
Sbjct: 417 EGWFRSGDLAVWHPDGYVEVKDRSKDIIISGGENISSLEVEDVLYRHPDVDEVAVIAMPD 476
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+PCAFV LK G + ++ ++I +CR ++P + PK ++F LPKT+TGKV
Sbjct: 477 EKWGEVPCAFVKLKEGRE-----LSQVELIAFCREQMPHFKAPKRIIFTP-LPKTSTGKV 530
Query: 540 QKYVL 544
QKY+L
Sbjct: 531 QKYML 535
>gi|293610404|ref|ZP_06692705.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427424227|ref|ZP_18914361.1| AMP-binding enzyme [Acinetobacter baumannii WC-136]
gi|292827636|gb|EFF86000.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425698967|gb|EKU68589.1| AMP-binding enzyme [Acinetobacter baumannii WC-136]
Length = 545
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 249/551 (45%), Positives = 341/551 (61%), Gaps = 22/551 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L PAN L+PL ++ERAA D SII+ +W +TY+RC Q AS L GI
Sbjct: 6 DELPRTPANFVALSPLRYLERAAYIYPDQASIIHGKRQISWKETYQRCCQFASQLKQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PNIPAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+ESK++ VD
Sbjct: 66 EKNDTVSVLLPNIPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAESKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D E + F+ + YE +A+GD
Sbjct: 126 VNLAREALSLIPNQHI---VVIDVADTEYEGENQ---------FLGSFEYEEWIAQGDIN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
FSW P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FSWHLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI H V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAAHKVDYFCGAPIVLSMILNLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
V ++ AG+ PP ++ ++G V+H YG TE G + CA + WN+L E
Sbjct: 294 TSFAHHVEVMVAGAAPPVAIIEGMRNMGINVNHVYGLTETYGPSALCASQSGWNELSIAE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + ++DPET V DGQT GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLDPETMEPVPNDGQTMGEIMFRGNIVMKGYLKNPKATQEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LK G + T ++II +C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDARWQEVPCAFIELKMGATA-----TPEEIIAHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIA 548
K+QK++L + A
Sbjct: 528 KLQKFILREWA 538
>gi|332856897|ref|ZP_08436306.1| CoA ligase [Acinetobacter baumannii 6013150]
gi|332867200|ref|ZP_08437465.1| CoA ligase [Acinetobacter baumannii 6013113]
gi|332726951|gb|EGJ58456.1| CoA ligase [Acinetobacter baumannii 6013150]
gi|332734139|gb|EGJ65271.1| CoA ligase [Acinetobacter baumannii 6013113]
Length = 547
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 246/551 (44%), Positives = 345/551 (62%), Gaps = 22/551 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L PAN L+PL ++ERAA D SII+ + +W QTY+RC Q AS L GI
Sbjct: 11 NELPRTPANFVALSPLRYLERAAYIYPDQASIIHGNRQISWKQTYQRCRQFASQLQQLGI 70
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 71 VKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDSEF 130
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D+E + F+ + YE LA+GD
Sbjct: 131 VNLAREALSLIPNQHI---IVIDVADEEYEGENQ---------FLGSFEYEEWLAQGDAN 178
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 179 FEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 238
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI K+ V + CGAPIVL+++ + P+ KQ
Sbjct: 239 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKYKVDYFCGAPIVLSMIINLPKEKQ 298
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++ V ++ AG+ PP V+ ++G V+H YG TE G + CA + W+ L E
Sbjct: 299 PSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSITE 358
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + +++PET V DG+T GEI+ RG +M GYLK+P+AT +
Sbjct: 359 QAQLHSRQGVPYPLQDSMRVLNPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPKATEEA 418
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 419 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 478
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LKTG T ++II++C+ + R+ VPK VV I E+PKT+TG
Sbjct: 479 PDERWQEVPCAFIELKTGAS-----VTPEEIIEHCQKELARFKVPKDVV-ITEIPKTSTG 532
Query: 538 KVQKYVLGDIA 548
K+QK++L + A
Sbjct: 533 KLQKFILREWA 543
>gi|421675912|ref|ZP_16115831.1| AMP-binding enzyme [Acinetobacter baumannii OIFC065]
gi|421692560|ref|ZP_16132211.1| AMP-binding enzyme [Acinetobacter baumannii IS-116]
gi|404559846|gb|EKA65097.1| AMP-binding enzyme [Acinetobacter baumannii IS-116]
gi|410381429|gb|EKP33995.1| AMP-binding enzyme [Acinetobacter baumannii OIFC065]
Length = 542
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/553 (44%), Positives = 345/553 (62%), Gaps = 22/553 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L PAN L+PL ++ERAA D SII+ + +W QTY+RC Q AS L GI
Sbjct: 6 NELPRTPANFVALSPLRYLERAAYIYPDQASIIHGNRQISWKQTYQRCRQFASQLQQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 VKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D+E + F+ + YE LA+GD
Sbjct: 126 VNLAREALSLIPNQHI---IVIDVADEEYEGENQ---------FLGSFEYEEWLAQGDAN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI K+ V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKYKVDYFCGAPIVLSMIINLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++ V ++ AG+ PP V+ ++G V+H YG TE G + CA + W+ L E
Sbjct: 294 PSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSITE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + ++DPET V DG+T GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPKATEEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LKTG T ++II++C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDERWQEVPCAFIELKTGAS-----VTPEEIIEHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIANS 550
K+QK++L + A
Sbjct: 528 KLQKFILREWAKE 540
>gi|169634343|ref|YP_001708079.1| acyl-CoA synthetase [Acinetobacter baumannii SDF]
gi|169153135|emb|CAP02214.1| putative AMP-dependent synthetase/ligase [Acinetobacter baumannii]
Length = 542
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/553 (44%), Positives = 344/553 (62%), Gaps = 22/553 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L PAN L+PL ++ERAA D SII+ + +W QTY+RC Q AS L GI
Sbjct: 6 NELPRTPANFVALSPLRYLERAAYIYPDQASIIHGNRQISWKQTYQRCRQFASQLQQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 VKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D+E + F+ + YE LA+GD
Sbjct: 126 VNLAREALSLIPNQHI---IVIDVADEEYEGENQ---------FLGSFEYEEWLAQGDAN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI KH V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGAPIVLSMIINLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++ V ++ AG+ PP V+ ++G V+H YG TE G + CA + W+ L E
Sbjct: 294 PSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSITE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + ++DPET V DG+T GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPKATEEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LKT T ++II++C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDERWQEVPCAFIELKTEAS-----VTPEEIIEHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIANS 550
K+QK++L + A
Sbjct: 528 KLQKFILREWAKE 540
>gi|114769345|ref|ZP_01446971.1| acyl-CoA synthase [Rhodobacterales bacterium HTCC2255]
gi|114550262|gb|EAU53143.1| acyl-CoA synthase [Rhodobacterales bacterium HTCC2255]
Length = 542
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/547 (43%), Positives = 346/547 (63%), Gaps = 19/547 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PLTPL F+ERAA+ D ++I+ + +S+ YRR ++LASSL+ GI
Sbjct: 9 LDQNPANYQPLTPLTFLERAASVFPDQIAVIHGNLRQNYSELYRRSVKLASSLNKIGIKR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G +SV+ PN PAM E H+ VPMSGAI ++INTRLDA TIS L H+E+K+ +D+ +
Sbjct: 69 GDTISVLLPNTPAMLEAHYGVPMSGAILHSINTRLDASTISFQLNHAETKVFIIDNEYMA 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L E + +++ DD E I +F+D +GD F+W+
Sbjct: 129 LAQEALKSI----DIKPIIIEYDDLEYLGKKEEFESINYEEFID-------QGDDAFNWL 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+++ D + +NYT GTT PKGVV ++ +++A + + +PK S+ LWTLPMFH N
Sbjct: 178 MPENEWDAISINYTSGTTGRPKGVVTHHRGAYLLAQGNALTISMPKHSIYLWTLPMFHCN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS--PEAKQLD 301
GW F W + + T+VCLR+ A ++ LI +H V+H+CGAPIV++++ ++ E ++L+
Sbjct: 238 GWCFPWTMSAISGTHVCLRQVRADKIWHLISEHKVSHLCGAPIVMSVIVNALQSEKRKLN 297
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V LTA +PPP +L GF V+H YG TE G V W+ W+KLP E+A L
Sbjct: 298 HTVEFLTAAAPPPEKILTGMNLSGFNVTHLYGLTETYGPAVVNDWQENWSKLPEEEQAKL 357
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR + L +D++DP T V RDG++ GE++ RG +M GY K+P+AT++ K G
Sbjct: 358 KSRQGVRYLPLEGLDVLDPATMKPVPRDGKSLGEVMFRGNVVMKGYFKNPKATNEAFKGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G+MHPDGYL++KDRSKD+IISGGENISS EIE VLYSH V AAVV P
Sbjct: 418 WFHSGDLGVMHPDGYLQLKDRSKDIIISGGENISSIEIEEVLYSHNSVEIAAVVAMPHEK 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV + + G E D++ +C+ + Y +PK + I +P+T+TGK+QK
Sbjct: 478 WGETPCAFVQI-----AEGHCINENDLMVWCKKFLASYKIPKKFI-IKNIPRTSTGKIQK 531
Query: 542 YVLGDIA 548
++L D A
Sbjct: 532 FLLRDEA 538
>gi|445400257|ref|ZP_21429907.1| AMP-binding enzyme [Acinetobacter baumannii Naval-57]
gi|444783639|gb|ELX07498.1| AMP-binding enzyme [Acinetobacter baumannii Naval-57]
Length = 542
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/553 (44%), Positives = 345/553 (62%), Gaps = 22/553 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L PAN L+PL ++ERAA D SII+ + +W QTY+RC Q AS L GI
Sbjct: 6 NELPRTPANFVALSPLRYLERAAYIYPDQASIIHGNRQISWKQTYQRCRQFASQLQQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 VKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D+E + F+ + YE LA+GD
Sbjct: 126 VNLAREALSLIPNQHI---IVIDVADEEYEGENQ---------FLGSFEYEEWLAQGDAS 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI K+ V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKYKVDYFCGAPIVLSMIINLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++ V ++ AG+ PP V+ ++G V+H YG TE G + CA + W+ L E
Sbjct: 294 PSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSITE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + ++DPET V DG+T GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPKATEEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LKTG T ++II++C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDERWQEVPCAFIELKTGAS-----VTPEEIIEHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIANS 550
K+QK++L + A
Sbjct: 528 KLQKFILREWAKE 540
>gi|86749801|ref|YP_486297.1| acyl-CoA synthetase [Rhodopseudomonas palustris HaA2]
gi|86572829|gb|ABD07386.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
HaA2]
Length = 549
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 254/550 (46%), Positives = 336/550 (61%), Gaps = 21/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PL+PL F+ER A D S++Y YTW +T RC + AS LS GI
Sbjct: 12 LDKTPANYVPLSPLSFLERTANVYPDHTSVVYEGRHYTWKETRARCRRFASWLSRSGIGR 71
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+++ PN+PAM E HFAVPM+GA+ N +N RLDA I+ L+H +K++ VD S+
Sbjct: 72 GDTVALMLPNVPAMVEAHFAVPMAGAVLNALNIRLDAPAIAFQLEHGGAKIILVDPEFSA 131
Query: 124 LLLEVVSLFPPHSKTPK-LVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ + + K PK LV+ DDK RI + YE +A GDP F
Sbjct: 132 VIADALK----QMKGPKPLVIDVDDKMFPGHH----RIGELE----YEYAVASGDPCFVG 179
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
RP+ + D + L YT GTT PKGVV ++ ++ AV +++ + V LWTLPMFH
Sbjct: 180 QRPQDEWDAIALGYTSGTTGNPKGVVTHHRGAYLNAVSNILAANLGSHPVYLWTLPMFHC 239
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--L 300
NGW F W A NVCLRK D +F LI +HGVTHM GAPIV N L ++PEA +
Sbjct: 240 NGWCFPWTIAAAAGVNVCLRKVDPAKIFDLIPRHGVTHMSGAPIVYNALINAPEAPKGAA 299
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
RPV L AG+ PP VL E +G ++H YG TE+ G CA +P W+ LP ERA
Sbjct: 300 ARPVVGLIAGAAPPVAVLAGAEQVGIKLTHVYGLTEVYGPASVCAEQPGWDDLPVAERAQ 359
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
LK RQGV V ++DPET V RDG+T GE++ RG +M GYLK+ +AT + +
Sbjct: 360 LKRRQGVPYPLQEAVTVLDPETMQEVPRDGETIGEVMFRGNIVMKGYLKNEKATKEALAG 419
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+G++ GY+ IKDRSKD+IISGGEN+SS E+E VLY HP + AAVV +PDP
Sbjct: 420 GWFHTGDLGVLDAHGYVIIKDRSKDIIISGGENVSSVEVEDVLYKHPAILFAAVVAKPDP 479
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV LK G + +E +II YCR +P + PKT+VF +PKT+TGK+Q
Sbjct: 480 KWGEVPCAFVELKDGASA-----SEAEIIAYCREHLPGFKTPKTIVF-SAIPKTSTGKIQ 533
Query: 541 KYVLGDIANS 550
K++L D S
Sbjct: 534 KFMLRDQVKS 543
>gi|359427997|ref|ZP_09219040.1| putative fatty-acid--CoA ligase [Acinetobacter sp. NBRC 100985]
gi|358236659|dbj|GAB00579.1| putative fatty-acid--CoA ligase [Acinetobacter sp. NBRC 100985]
Length = 547
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/551 (43%), Positives = 350/551 (63%), Gaps = 19/551 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L PAN L+PL ++ERAA + +II+ TW QTY+RC Q A LS+ GI
Sbjct: 6 DELPRTPANFVALSPLRYLERAAYIYPNQAAIIHGQRHITWQQTYQRCSQFAHQLSNLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPMSGA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 KKNDTVSVLLPNVPAMIEAHFAVPMSGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
++ E ++L T ++++I ++ +I + YE+ LA+G+P+F
Sbjct: 126 RAIAEEALTLV-----TRQIIVI----DVFDQEYEGEQIALGQY--EYESWLAEGNPEFD 174
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W+ P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+FH
Sbjct: 175 WLLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPLFH 234
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL- 300
NGW F W A G TN+CLR+ D +F I +H V + CGAPIVL++L ++P+ +++
Sbjct: 235 CNGWCFAWSIAASGGTNICLRRVDPALIFKYIAEHKVDYFCGAPIVLSMLINAPQEQKIA 294
Query: 301 -DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+ V ++ AG+ PP ++ ++G V+H YG TE G + CA + W+ L +E+A
Sbjct: 295 FEHHVEVMVAGAAPPVAIIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSIQEQA 354
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L +RQGV + ++DPET V DG+T GEI+ RG +M GYLK+P+AT K
Sbjct: 355 QLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPQATEDAFK 414
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +PD
Sbjct: 415 GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYRHPAVLTAAVVAKPD 474
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
WQE+PCAF+ LK G + + ++II +C+ + R+ VPK +V I E+PKT+TGK+
Sbjct: 475 ERWQEVPCAFIELKQGASA-----SSEEIIAHCQKELARFKVPKDIV-ITEIPKTSTGKL 528
Query: 540 QKYVLGDIANS 550
QK++L + A
Sbjct: 529 QKFILREWAKQ 539
>gi|169797158|ref|YP_001714951.1| acyl-CoA synthetase [Acinetobacter baumannii AYE]
gi|213156052|ref|YP_002318097.1| acyl-CoA synthetase [Acinetobacter baumannii AB0057]
gi|215484621|ref|YP_002326856.1| AMP-binding enzyme family protein [Acinetobacter baumannii
AB307-0294]
gi|301346224|ref|ZP_07226965.1| acyl-CoA synthetase [Acinetobacter baumannii AB056]
gi|301510744|ref|ZP_07235981.1| acyl-CoA synthetase [Acinetobacter baumannii AB058]
gi|301596040|ref|ZP_07241048.1| acyl-CoA synthetase [Acinetobacter baumannii AB059]
gi|417573677|ref|ZP_12224531.1| AMP-binding enzyme [Acinetobacter baumannii Canada BC-5]
gi|421642864|ref|ZP_16083375.1| AMP-binding enzyme [Acinetobacter baumannii IS-235]
gi|421645672|ref|ZP_16086136.1| AMP-binding enzyme [Acinetobacter baumannii IS-251]
gi|421657783|ref|ZP_16098031.1| AMP-binding enzyme [Acinetobacter baumannii Naval-83]
gi|421701242|ref|ZP_16140748.1| AMP-binding enzyme [Acinetobacter baumannii IS-58]
gi|421798709|ref|ZP_16234725.1| AMP-binding enzyme [Acinetobacter baumannii Canada BC1]
gi|169150085|emb|CAM87979.1| putative AMP-dependent synthetase/ligase [Acinetobacter baumannii
AYE]
gi|213055212|gb|ACJ40114.1| acyl-CoA synthase [Acinetobacter baumannii AB0057]
gi|213987663|gb|ACJ57962.1| AMP-binding enzyme family protein [Acinetobacter baumannii
AB307-0294]
gi|400209245|gb|EJO40215.1| AMP-binding enzyme [Acinetobacter baumannii Canada BC-5]
gi|404567844|gb|EKA72959.1| AMP-binding enzyme [Acinetobacter baumannii IS-58]
gi|408511430|gb|EKK13078.1| AMP-binding enzyme [Acinetobacter baumannii IS-235]
gi|408518300|gb|EKK19826.1| AMP-binding enzyme [Acinetobacter baumannii IS-251]
gi|408711572|gb|EKL56777.1| AMP-binding enzyme [Acinetobacter baumannii Naval-83]
gi|410412150|gb|EKP64010.1| AMP-binding enzyme [Acinetobacter baumannii Canada BC1]
Length = 542
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 246/551 (44%), Positives = 345/551 (62%), Gaps = 22/551 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L PAN L+PL ++ERAA D SII+ + +W QTY+RC Q AS L GI
Sbjct: 6 NELPRTPANFVALSPLRYLERAAYIYPDQASIIHGNRQISWKQTYQRCRQFASQLQQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 VKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDSEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D+E + F+ + YE LA+GD
Sbjct: 126 VNLAREALSLIPNQHI---IVIDVADEEYEGENQ---------FLGSFEYEEWLAQGDAN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI K+ V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKYKVDYFCGAPIVLSMIINLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++ V ++ AG+ PP V+ ++G V+H YG TE G + CA + W+ L E
Sbjct: 294 PSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSITE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + +++PET V DG+T GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLNPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPKATEEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LKTG T ++II++C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDERWQEVPCAFIELKTGAS-----VTPEEIIEHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIA 548
K+QK++L + A
Sbjct: 528 KLQKFILREWA 538
>gi|427427910|ref|ZP_18917952.1| Long-chain-fatty-acid--CoA ligase [Caenispirillum salinarum AK4]
gi|425882611|gb|EKV31290.1| Long-chain-fatty-acid--CoA ligase [Caenispirillum salinarum AK4]
Length = 547
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/551 (44%), Positives = 338/551 (61%), Gaps = 23/551 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN LTP+ F+ERAA D P++++ YTW QT R +L S+LS GI P
Sbjct: 11 LDKNDANFVALTPIQFLERAALVWPDRPAVVHGARRYTWKQTMERAKRLGSALSKRGIGP 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+A N P +YE HF VPM+GA+ N +N RLDA I+ IL H E+K V D S
Sbjct: 71 GDTVAVMAANTPELYEAHFGVPMTGAVINALNIRLDAEAIAFILDHGEAKFVITDREFSR 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFV--DTYENMLAKGDPQFS 181
+ E + P V+ DD E D + TYE +L +G+P F+
Sbjct: 131 TMKEALEKLG--RDIP--VIDIDDSEAGDV---------GDLIGEKTYEALLEEGEPDFA 177
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W PK + + + LNYT GTT PKGVV ++ ++ A+ +++ W +P + LWTLPMFH
Sbjct: 178 WRWPKDEWEAIALNYTSGTTGNPKGVVYHHRGAYLNAMSNVVTWSMPPHATYLWTLPMFH 237
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQ 299
NGW F W A++G T+VCLRK A +F I VTH CGAPIV+ + ++ ++ ++
Sbjct: 238 CNGWCFPWTLAIIGGTSVCLRKVTAKNIFDAIADEKVTHFCGAPIVMGFIVNAKDSDKRE 297
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
D+ V ++TA +PPPA VL R + GF V+H YG TE G CAWK +WN LP E+A
Sbjct: 298 FDQKVNVMTAAAPPPASVLERMQREGFNVTHVYGLTETYGPATVCAWKEEWNDLPVEEQA 357
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+ K+RQGVR + + ++DPET DG+T GE++MRG M GYLK+P+A+ +
Sbjct: 358 ARKSRQGVRYVVQEGLTVMDPETMQETPADGETIGEVMMRGNITMKGYLKNPKASQEAFA 417
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+G+MH DGY+++KDRSKD+IISGGENISS E+E VL+ HP VN AAVV +PD
Sbjct: 418 GGWFHTGDLGVMHDDGYIQLKDRSKDIIISGGENISSIEVEGVLHKHPAVNAAAVVAKPD 477
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E P A+V L G + +D+I +CR + + P+ V F+ ELPKT+TGK+
Sbjct: 478 DKWGETPLAYVEL-----CEGQAVSAEDLIAFCREHLAHFKCPREVRFV-ELPKTSTGKI 531
Query: 540 QKYVLGDIANS 550
QK+VL +A
Sbjct: 532 QKFVLRSMAKG 542
>gi|425744206|ref|ZP_18862266.1| AMP-binding enzyme [Acinetobacter baumannii WC-323]
gi|425491594|gb|EKU57875.1| AMP-binding enzyme [Acinetobacter baumannii WC-323]
Length = 547
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 243/551 (44%), Positives = 345/551 (62%), Gaps = 19/551 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L AN L+PL ++ERAA +II+ + TW TY+RC Q A L+ GI
Sbjct: 6 DELPRTAANFVALSPLRYLERAAYIYPQQAAIIHGERQITWQHTYQRCRQFAHQLAKLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PNIPAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+ESK++ VD
Sbjct: 66 QKNDTVSVLLPNIPAMIETHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAESKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
+ E + L P ++V+I ++ S +I + YE+ LA+G+P+F
Sbjct: 126 REVAAEALKLVPQ-----EIVVI----DVFDSEFEGEQIAIGQY--EYESWLAQGNPEFE 174
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W+ P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+FH
Sbjct: 175 WLLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPLFH 234
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A G TN+CLR+ D +F I ++ V + CGAPIVL++L ++P ++
Sbjct: 235 CNGWCFAWSIAASGGTNICLRRVDPVLIFKYIAQYKVDYFCGAPIVLSMLINAPSEQRTS 294
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
D V ++ AG+ PP ++ LG V+H YG TE G + CA + WN L +E+A
Sbjct: 295 FDHHVEVMVAGAAPPVAIIEGMHHLGVNVNHVYGLTETYGPSALCASQAGWNDLSIQEQA 354
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L +RQGV + ++DP+T V DGQT GEI+ RG +M GYLK+PEAT + K
Sbjct: 355 QLHSRQGVPYPLQDSMRVLDPKTMQPVPNDGQTMGEIMFRGNIVMKGYLKNPEATQEAFK 414
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +PD
Sbjct: 415 GGWFHTGDLAVSHPDGYAKITDRSKDIIISGGENISSLEVEDVLYRHPAVLTAAVVAKPD 474
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
WQE+PCAF+ LK G + T ++II +C+ ++ R+ VPK VV I E+PKT+TGK+
Sbjct: 475 QRWQEVPCAFIELKQGATA-----TPEEIIAHCQQQLARFKVPKDVV-IAEIPKTSTGKL 528
Query: 540 QKYVLGDIANS 550
QK++L + A
Sbjct: 529 QKFILREWAKQ 539
>gi|421808089|ref|ZP_16243946.1| AMP-binding enzyme [Acinetobacter baumannii OIFC035]
gi|410416268|gb|EKP68043.1| AMP-binding enzyme [Acinetobacter baumannii OIFC035]
Length = 542
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/553 (44%), Positives = 344/553 (62%), Gaps = 22/553 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L PAN L+PL ++ERAA D SII+ + +W QTY+RC Q AS L GI
Sbjct: 6 NELPRTPANFVALSPLRYLERAAYIYPDQASIIHGNRQISWKQTYQRCRQFASQLQQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PNIPAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 VKNDTVSVLLPNIPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D+E + F+ + YE LA+GD
Sbjct: 126 VNLAREALSLIPNQHI---IVIDVADEEYEGENQ---------FLGSFEYEEWLAQGDAN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI K+ V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKYKVDYFCGAPIVLSMIINLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++ V ++ AG+ PP V+ ++G V+H YG TE G + CA + W+ L E
Sbjct: 294 PSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSITE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + ++DPET V DG+T GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPKATEEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LK G T ++II++C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDERWQEVPCAFIELKNGAS-----VTPEEIIEHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIANS 550
K+QK++L + A
Sbjct: 528 KLQKFILREWAKE 540
>gi|154252530|ref|YP_001413354.1| AMP-dependent synthetase and ligase [Parvibaculum lavamentivorans
DS-1]
gi|154156480|gb|ABS63697.1| AMP-dependent synthetase and ligase [Parvibaculum lavamentivorans
DS-1]
Length = 542
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 253/550 (46%), Positives = 344/550 (62%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PLTP+ F++RAA ++++ +++ Y RC +LAS+LS GI
Sbjct: 10 LDRNAANHQPLTPMSFLKRAAEVYPGKLAVVHGSIRRDYAEFYARCRKLASALSERGIGL 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+VIAPNIPAM ELH+AVPM GA+ NT+N RLD I +L H E+K +FVD S+
Sbjct: 70 GDTVAVIAPNIPAMLELHYAVPMIGAVLNTMNIRLDGAIIGFMLDHGEAKALFVDREFSA 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L E +S +K V+ DD E P RI A+ YE+ LA+GD +F W
Sbjct: 130 LGKEALS----KAKVKPFVIDIDDAEYDG---PGDRIGEAE----YEDFLAQGDAKFDWS 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ +++A+ +++ + SV LWT+PMFH N
Sbjct: 179 LPADEWQAISLNYTSGTTGNPKGVVFHHRGAYLLAMGNIVTAGMTGNSVYLWTVPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLD 301
GW FTW +V+ T+VCLR+ A +F+ I +HGVTHM GAP V++ L ++ E K L
Sbjct: 239 GWCFTWSMSVIAGTHVCLRRVTAANIFSAIAEHGVTHMAGAPTVMSFLINATEEEKKPLP 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V A +PPPA + + E+ GF V H YG TE G V AW +W++L RA +
Sbjct: 299 HTVSYFAAAAPPPAATIRKLEAEGFNVIHVYGLTETYGPAVVNAWHDEWDELEVNARAQV 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGV L + + DPET V RDG+T GE++ RG +M GYLK+P+A+++ G
Sbjct: 359 KARQGVNYPVLEGISVRDPETMEEVPRDGETMGEVMFRGNVVMKGYLKNPKASAEAFAGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G+ HPD Y+++KDRSKD+IISGGENISS E+E VLY HP + EAAVV RPD
Sbjct: 419 WFHSGDLGVWHPDNYIQLKDRSKDIIISGGENISSLEVEDVLYKHPDIIEAAVVARPDEK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF++L+ G TEKD+I YCR + + PKTVVF D LPKT+TGKVQK
Sbjct: 479 WGETPCAFITLRKGAS-----LTEKDVIAYCREHLAHFKCPKTVVFTD-LPKTSTGKVQK 532
Query: 542 YVLGDIANSM 551
+ L + A +
Sbjct: 533 FKLREQAGEL 542
>gi|242095652|ref|XP_002438316.1| hypothetical protein SORBIDRAFT_10g012080 [Sorghum bicolor]
gi|241916539|gb|EER89683.1| hypothetical protein SORBIDRAFT_10g012080 [Sorghum bicolor]
Length = 579
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 268/560 (47%), Positives = 370/560 (66%), Gaps = 24/560 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDT------TYTWSQTYRRCLQLASSLSSFGIN 62
AN PLTP+ F+ER+A D P+I+ + +W +T RRCL+LA++L++ G+
Sbjct: 9 ANHAPLTPISFLERSALVYPDRPAIVSSGLGSASAPVKSWRETRRRCLRLAAALAALGVA 68
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
VV+V A N+PAM ELHF +PM+GA+ +N+RLDA S++L+HSE+K++FVD+
Sbjct: 69 AHDVVAVFAQNVPAMCELHFGIPMAGAVICALNSRLDATMASVLLQHSEAKVIFVDYALL 128
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAK-GDPQFS 181
+ + +SL P LV++ KE+ + SSPP A YE +++K G P F
Sbjct: 129 DVAKKALSLVSKTGAKPPLVVLI--KELLNESSPPDDGSQAFHHYEYEALISKDGSPDFR 186
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLI--DWVVPKQSVLLWTLPM 239
P + +P+ LNYT GTTS PKGVV ++ ++ ++ ++I + V V LWT+PM
Sbjct: 187 IRWPADENEPLALNYTSGTTSRPKGVVYTHRGAYLNSIATVIMNEMAVGTPPVYLWTVPM 246
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS----- 294
FH NGW WG A G TNVCLRK A VF I +H VTHM GAP VL+++ ++
Sbjct: 247 FHCNGWCLVWGVAATGGTNVCLRKVTAAAVFDGIARHRVTHMGGAPTVLSMIVNATAEER 306
Query: 295 ---PEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWN 351
P + +RPV + G+PPP VLLR E+LGF+V HGYG TE G CAWKP+W+
Sbjct: 307 RPLPLPSRRERPVIVKAGGAPPPPQVLLRMEALGFLVIHGYGMTETYGPATFCAWKPEWD 366
Query: 352 KLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDP 411
LP +RASL+ARQG+ +GL EVD+ DP T SV DG+T GEI++RG ++ GY KD
Sbjct: 367 ALPPEQRASLRARQGLHHLGL-EVDVKDPVTMRSVPADGRTMGEIMLRGNTVTSGYYKDA 425
Query: 412 EATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNE 471
AT++ + G +GD+ + H DGY++I DRSKD+IISGGENIS+ E+E+ L++HP V E
Sbjct: 426 AATAEALAGGWLRSGDLAVRHRDGYVKIMDRSKDIIISGGENISTIEVEAALFAHPAVAE 485
Query: 472 AAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDEL 531
AAVV RPD +W E PCAFV+L+ GTD+ G E+D+I +CRAR+PRYMVP+TVVF+ EL
Sbjct: 486 AAVVARPDEYWGETPCAFVTLRDGTDAVG----EEDVIAFCRARLPRYMVPRTVVFVPEL 541
Query: 532 PKTATGKVQKYVLGDIANSM 551
PKTATGKVQK +L + A +M
Sbjct: 542 PKTATGKVQKVLLRNQAKAM 561
>gi|423196721|ref|ZP_17183304.1| hypothetical protein HMPREF1171_01336 [Aeromonas hydrophila SSU]
gi|404632175|gb|EKB28804.1| hypothetical protein HMPREF1171_01336 [Aeromonas hydrophila SSU]
Length = 540
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/545 (45%), Positives = 341/545 (62%), Gaps = 24/545 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ NPAN LTP+ F+ RAA D P++I+ +W+QT RRC QLAS+L GI
Sbjct: 11 LEKNPANYEALTPISFLGRAARVYPDYPALIHGPLRQSWAQTERRCRQLASALRLHGIGE 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS++APN PAM+E HF VPMSGA+ NTINTRLDA +++ I +H++SK V VD +
Sbjct: 71 GDTVSIVAPNTPAMFEAHFGVPMSGAVLNTINTRLDAESMAFIFQHAQSKAVLVDREFGA 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQFS 181
L+ + ++L P L+ I D P + V YE LA+G+
Sbjct: 131 LVQKALALI---ELAPLLIAIDD-----------PLYREGELVSDLDYEAFLAEGNGDEP 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
P+ + + LNYT GTT PKGVV ++ + AV++++ W +PK SV LWTLPMFH
Sbjct: 177 GWLPQDEWQAISLNYTSGTTGNPKGVVYHHRGAHLNAVNNVLSWELPKHSVYLWTLPMFH 236
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQ 299
NGW F W A +VCLR A V+ + H VTH C APIVLN+L+++ A +
Sbjct: 237 CNGWCFPWTLAATAGVSVCLRHVQAAAVYEALHAHKVTHFCAAPIVLNMLNNADPALKRG 296
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
LD P++ +TAG+ PPA V+ E++G V+H YG TE G V C + W A +
Sbjct: 297 LDHPIKAMTAGAAPPATVIAGMEAMGTAVTHVYGLTETYGPCVLCEPQRSWQGQDATTLS 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKARQGV + E+ I++P +G V +DG+T GEIV+RG +M GYLK+P A+++ M
Sbjct: 357 RLKARQGVASPLQGEMRIINPVSGEPVPQDGKTMGEIVLRGNVVMKGYLKNPVASAEAMA 416
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
+G + +GD+ + HPDGY+EIKDRSKD+IISGGENISS E+E VLY HP V+E AV+ PD
Sbjct: 417 EGWFRSGDLAVWHPDGYVEIKDRSKDIIISGGENISSLEVEDVLYRHPDVDEVAVIAMPD 476
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+PCAFV LK G + T+ ++I +CR ++ + PK ++F LPKT+TGKV
Sbjct: 477 EKWGEVPCAFVKLKEGRE-----LTQAELIAFCREQMAHFKAPKRIIFTP-LPKTSTGKV 530
Query: 540 QKYVL 544
QK++L
Sbjct: 531 QKFML 535
>gi|23013752|ref|ZP_00053614.1| COG0318: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
[Magnetospirillum magnetotacticum MS-1]
Length = 541
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/552 (43%), Positives = 342/552 (61%), Gaps = 24/552 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN LTPL F+ERAA D ++I+ TW++T+ RC +LA++L+ GI
Sbjct: 10 LTKNDANFVALTPLTFLERAAAVWPDRLAVIHGPVRRTWAETFVRCRKLAAALAQRGIGL 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+++ N P +E HF VP++GA+ N INTRLDA ++ IL H+E+K++ D S
Sbjct: 70 GDTVALMGANTPETFEAHFGVPLTGAVLNAINTRLDADAVTFILNHAEAKILITDREFSP 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFV--DTYENMLAKGDPQFS 181
++ + ++ +T ++ I D P+ + + TYE +L + +
Sbjct: 130 VVKKALAAL---GRTIPVIDIDD-----------PQFKGGELLGEKTYEQLLDEAQSEAP 175
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + + LNYT GTT PKGVV ++ ++ AV + + W + +V LWTLPMFH
Sbjct: 176 WTMPSDEWQAIALNYTSGTTGNPKGVVYHHRGAYLNAVSNALSWQMGDGTVYLWTLPMFH 235
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQ 299
NGW F W AVV T+VCLR + + IR VT+ CGAPIVLN+++++P A +
Sbjct: 236 CNGWCFPWTMAVVAGTSVCLRHVRVDAIMSAIRDEKVTNFCGAPIVLNMINNAPAALKEG 295
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+ V+++TAG+ PPAPV+ E +G+ V+H YG TE G V C W KWN L E+A
Sbjct: 296 ISHAVKVMTAGAAPPAPVIAGMERMGWEVTHVYGLTECYGPTVQCVWHDKWNPLSIEEKA 355
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+KARQGVR L + I DP + +DG+T GEI MRG ++M GYLK+P AT +
Sbjct: 356 QIKARQGVRGPMLEGLMIADPLSLEPAPKDGKTVGEIFMRGNNVMKGYLKNPAATQEAFA 415
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+ + HPDGY+EIKDRSKD+IISGGENISS E+E +LY+HP V EAAVV RPD
Sbjct: 416 GGWFHTGDLAVWHPDGYVEIKDRSKDIIISGGENISSIEVEDILYAHPAVLEAAVVARPD 475
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E PCAF++LK G ++ +E DII +CR R+ + VP+T+VF LPKT+TGKV
Sbjct: 476 EKWGETPCAFIALKDGAEA-----SEADIISFCRERMAHFKVPRTIVF-GGLPKTSTGKV 529
Query: 540 QKYVLGDIANSM 551
QK++L A +
Sbjct: 530 QKFMLRQKAKEL 541
>gi|226941059|ref|YP_002796133.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Laribacter
hongkongensis HLHK9]
gi|226715986|gb|ACO75124.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Laribacter
hongkongensis HLHK9]
Length = 550
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/549 (42%), Positives = 347/549 (63%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PLTP+ F+ERAA + P++I+ YTWSQ + R +LAS+L+ G+
Sbjct: 13 LDKNPANYVPLTPVTFLERAAQVYPNKPAVIHGQRVYTWSQVFERSRRLASALAKHGVRK 72
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+++ PNIP M E HF +PM GA+ NT+N RLDA TI+ + H E++++ VD +S
Sbjct: 73 GSTVAILCPNIPEMVEAHFGIPMQGAVLNTMNYRLDAATIAFQIDHGEAEVLLVDSEFAS 132
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L E + + P +V I D + + RI TYE +LA+GDP + W
Sbjct: 133 LAREALH---KSGRRPLIVDIVDSE--YDTGDRVGRI-------TYEELLAEGDPGYEWP 180
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
+ + + D + LNYT GTT PKGVV ++ ++ A+ +++ + +V LW+LPMFH N
Sbjct: 181 QVEDEWDAITLNYTSGTTGNPKGVVYHHRGAYLNALGNIVATNMTPDTVTLWSLPMFHCN 240
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNL-LSSSPEAKQ-LD 301
GW F W A VG T+VCLR+ +A +F LI K+ V +MCGA +VL++ ++++ E ++
Sbjct: 241 GWCFNWSLAAVGGTSVCLRRVEAGLMFELIEKYKVNYMCGAAVVLSMFINAADEVRRPFP 300
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PVR + A +P P P++ E++GF ++H YG TE G +C WK ++N L ++ +
Sbjct: 301 LPVRFIAAAAPVPVPIIRAAEAIGFCITHVYGLTETYGPATACIWKDEYNALSDDDQGDI 360
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
+ RQGVR V ++ +T V DGQT GE++ RG +M GYLK+P AT + DG
Sbjct: 361 RKRQGVRYHVQEAVSVLKSDTMEPVPADGQTLGEVMFRGNVVMKGYLKNPSATEQAFADG 420
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++HPDGY+E+KDR+KD+IISGGENI + E+E+VLY HP V E AVV + D
Sbjct: 421 WFHTGDIGVLHPDGYIELKDRAKDIIISGGENIPTIEVEAVLYQHPSVLECAVVAKKDEK 480
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W EIPCA+++LK G + M +++Q+CR R+ Y VP+ VF LPKT+TGK+QK
Sbjct: 481 WGEIPCAYITLKFGAEEPSTM----ELMQFCRERLAHYKVPRLYVF-GPLPKTSTGKIQK 535
Query: 542 YVLGDIANS 550
+VL D AN
Sbjct: 536 FVLRDQANQ 544
>gi|417862740|ref|ZP_12507790.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Agrobacterium
tumefaciens F2]
gi|338820002|gb|EGP53976.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Agrobacterium
tumefaciens F2]
Length = 547
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 256/555 (46%), Positives = 336/555 (60%), Gaps = 18/555 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L+ PAN PLTPL F+ RAA D +II+ +TW Q RC QLAS+L GI
Sbjct: 8 DFLQRRPANFRPLTPLSFLLRAADVFPDRVAIIHGKERHTWRQYAHRCKQLASALMRTGI 67
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
G V++++PN PAM E HF VPMSG + NT+N RLDA I+ IL+H E+K+ VD
Sbjct: 68 RKGDAVAILSPNTPAMLEAHFGVPMSGGLLNTLNIRLDAEAIAFILEHCEAKVFLVDKQF 127
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
SS+ + ++L P +V I D S + RI TYE L +G +
Sbjct: 128 SSVAQDALALM---QSKPVVVDIED-----SLAEGGERIG----YYTYEEFLKRGHAEDP 175
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
P+ + + + LNYT GTT PKGV+ ++ ++I++ L+ + SV LWTLPMFH
Sbjct: 176 VYWPEDEFEALALNYTSGTTGNPKGVLYHHRGAYLISLGQLLHHKMDADSVYLWTLPMFH 235
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQ 299
NGW F+W A VG T+VCLRK +FA I H VTH+CGAP VL +L S +A ++
Sbjct: 236 CNGWCFSWAIAAVGGTHVCLRKVVPEDIFAAIETHNVTHLCGAPTVLGMLIDSGKAAGRK 295
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L RPV ++TAG+ PPA VL TE+LGFIV H YG TE+ V C W +W+ L R+
Sbjct: 296 LYRPVSVMTAGAAPPAAVLKETEALGFIVRHVYGSTEMHSVTTLCDWHREWDTLDPEARS 355
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
ARQGVRT + + DP T V +G GEI+ RG M GYLK+PEAT + K
Sbjct: 356 KKMARQGVRTAVTDAMMVADPITLEPVPHNGLAIGEILFRGSFGMKGYLKNPEATEEAFK 415
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G Y+TGD+ ++H DGY+EIKDR+KD+IISGGENISS EIE VL+ HP V+ AAVV
Sbjct: 416 GGWYHTGDLAVVHDDGYIEIKDRTKDIIISGGENISSIEIEDVLFKHPAVSYAAVVAMHS 475
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E PCAFV LK GT + TEK+++ +CRAR+ +Y VP V+F + +TATGKV
Sbjct: 476 DRWGERPCAFVELKPGTSN---QITEKELLDFCRARLAKYKVPDRVIF-GPIERTATGKV 531
Query: 540 QKYVLGDIANSMSMS 554
QK+ L + S
Sbjct: 532 QKFRLRHLVQETEKS 546
>gi|115524880|ref|YP_781791.1| acyl-CoA synthetase [Rhodopseudomonas palustris BisA53]
gi|115518827|gb|ABJ06811.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
BisA53]
Length = 549
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 252/549 (45%), Positives = 336/549 (61%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PLTPL F+ R A S++Y D + W++T RC +LAS L+ GI
Sbjct: 12 LDKNPANYVPLTPLSFLARTAAIYPTMTSMVYEDRRFNWAETSERCHRLASYLAGRGIGR 71
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V ++ PNIPAMYE HFAVPM GA+ N N RL+ +I+ L H +KLV VD +
Sbjct: 72 GDTVGLMLPNIPAMYEAHFAVPMLGAVINAFNIRLEPASIAFQLDHGGAKLVLVDPEFAG 131
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + ++L PK +LI D ++ PP RI + YE +A GDP F+
Sbjct: 132 VIEDAIALM----AGPKPILIDVD---DAAFGPPRRIGEIE----YEAAVAAGDPGFAAT 180
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + D + L YT GTT PKGVV ++ ++ AV +++ + + V LWTLPMFH N
Sbjct: 181 LPQDEWDAISLGYTSGTTGNPKGVVTHHRGAYLNAVSNILAAGLGQHPVYLWTLPMFHCN 240
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W A +VCLRK D +F LI KHGVTHM GAPIV N L ++P A +
Sbjct: 241 GWCFPWTLAAAAGVSVCLRKVDPAKIFELIPKHGVTHMAGAPIVYNTLINAPSAPKGAAA 300
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+PV L AG+ PP VL ES+G ++H YG TE+ G CA +P W+ LP ERA L
Sbjct: 301 KPVVGLIAGAAPPVAVLAGAESIGIKLTHVYGLTEVYGPAAVCAEQPGWDDLPLAERAQL 360
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K RQGV V ++DPET V RDG+T GE++ RG +M GYLK+ +AT + + G
Sbjct: 361 KRRQGVPYPLQEAVTVLDPETMTEVPRDGETIGEVMFRGNIVMKGYLKNEKATQEAFQGG 420
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++ GY+ IKDRSKD+IISGGEN+SS E+E VLY HP V AAVV +PDP
Sbjct: 421 WFHTGDLGVLDASGYVIIKDRSKDIIISGGENVSSVEVEDVLYKHPAVLFAAVVAKPDPK 480
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK GM TE +II +CR ++P + PK + F +PKT+TGK+QK
Sbjct: 481 WGEVPCAFVELKE-----GMSATEAEIIAFCRDQLPGFKTPKVIEFT-AIPKTSTGKIQK 534
Query: 542 YVLGDIANS 550
++L D S
Sbjct: 535 FMLRDQVKS 543
>gi|260556062|ref|ZP_05828281.1| O-succinylbenzoate-CoA ligase [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|260410117|gb|EEX03416.1| O-succinylbenzoate-CoA ligase [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|452955848|gb|EME61245.1| acyl-CoA synthetase [Acinetobacter baumannii MSP4-16]
Length = 542
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 246/551 (44%), Positives = 344/551 (62%), Gaps = 22/551 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L PAN L+PL ++ERAA D SII+ + +W QTY+RC Q AS L GI
Sbjct: 6 NELPRTPANFVALSPLRYLERAAYIYPDQASIIHGNRQISWKQTYQRCRQFASQLQQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 VKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D+E + F+ + YE LA+GD
Sbjct: 126 VNLAREALSLIPNQHI---IVIDVADEEYEGENQ---------FLGSFEYEEWLAQGDAN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+
Sbjct: 174 FEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W G TN+CLRK D V LI KH V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSITASGGTNICLRKVDPELVMQLIAKHKVDYFCGAPIVLSMIINLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++ V ++ AG+ PP V+ ++G V+H YG TE G + CA + W+ L E
Sbjct: 294 PSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSITE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + +++PET V DG+T GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLNPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPKATEEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LKTG T ++II++C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDERWQEVPCAFIELKTGAS-----VTPEEIIEHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIA 548
K+QK++L + A
Sbjct: 528 KLQKFILREWA 538
>gi|345872539|ref|ZP_08824472.1| o-succinylbenzoate--CoA ligase [Thiorhodococcus drewsii AZ1]
gi|343918787|gb|EGV29549.1| o-succinylbenzoate--CoA ligase [Thiorhodococcus drewsii AZ1]
Length = 544
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/548 (45%), Positives = 340/548 (62%), Gaps = 24/548 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+PL FIERAA+ D +++Y + +W +TYRR LAS+L G+ G VS
Sbjct: 17 ANYEPLSPLTFIERAASIYPDKTAVVYGEVRRSWGETYRRSRLLASALVRRGVRAGDTVS 76
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+++PN+P +E HF VPMSGA+ N+INTRLDA +++ IL+H+ES ++ D SS V
Sbjct: 77 IMSPNLPEHFEAHFGVPMSGAVLNSINTRLDASSVAFILEHAESNVLITDREMSS----V 132
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD--TYENMLAKGDPQFSWVRPK 186
VS KT +V+ DD P + + TYE LA+GD F W P
Sbjct: 133 VSKALAQMKTRPIVIDIDD----------PSFEGGELLGEMTYEQFLAEGDSDFDWKGPD 182
Query: 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
+ + + LNYT GTT PKGVV ++ ++ AV + + W +P ++V LWTLPMFH NGW
Sbjct: 183 DEWNAISLNYTSGTTGDPKGVVYHHRGAYLNAVSNALSWGMPNRAVYLWTLPMFHCNGWC 242
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP-EAKQ-LDRPV 304
F W A V +VC+R A + LI++ V H+CGAPIVL++L P E K+ L+ V
Sbjct: 243 FPWTVAAVSGVSVCVRHVRAVHLMELIKQEKVDHLCGAPIVLSMLVGVPAELKEGLNHTV 302
Query: 305 RILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
+++TAG+PPPA V+ E +GF V+H YG TE G V CAW W+ +ER+ LKAR
Sbjct: 303 KVMTAGAPPPASVIQGMEEMGFDVTHVYGLTETYGPCVVCAWNDDWDDKSMQERSRLKAR 362
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYY 424
QGVR + + DP T V RDG+T GEI MRG +M GYLK+P+ T + G ++
Sbjct: 363 QGVRVPMQEGLMVGDPVTLKPVPRDGETIGEIFMRGNVVMKGYLKNPKTTRASFQGGWFH 422
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
+GD+ + HPDGY+EIKDRSKD+IISGGENISS E+E L+ HP + + AVV D W E
Sbjct: 423 SGDLAVCHPDGYIEIKDRSKDIIISGGENISSIEVEETLFRHPSIQDVAVVAMSDEKWGE 482
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
+PCAF+SL TE+++++YCR + + VPK +VF D LP+T+TGKVQK++L
Sbjct: 483 VPCAFISLIPDA-----QMTEEEVVRYCRENMAHFKVPKKIVFKD-LPRTSTGKVQKFIL 536
Query: 545 GDIANSMS 552
A S
Sbjct: 537 RQWAKEES 544
>gi|423201670|ref|ZP_17188249.1| hypothetical protein HMPREF1167_01832 [Aeromonas veronii AER39]
gi|404616702|gb|EKB13655.1| hypothetical protein HMPREF1167_01832 [Aeromonas veronii AER39]
Length = 540
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 246/545 (45%), Positives = 342/545 (62%), Gaps = 24/545 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN LTP+ F+ RA D P++I+ +W +T RRC QLAS+L GI
Sbjct: 11 LAKTAANFEALTPISFLVRAERVYPDYPALIHGSLRQSWGETARRCRQLASALRLRGIGE 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS++APNIPAM+E HF VPMSGA+ NTINTRLDA +++ I +H++SK+V VD +
Sbjct: 71 GDTVSIVAPNIPAMFEAHFGVPMSGAVLNTINTRLDAESMAFIFQHAQSKVVLVDREFGA 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD--TYENMLAKGDPQFS 181
++ + + L + LV+ DD P V TYE +A G+
Sbjct: 131 VVRKALDLL----ECQPLVIAIDD----------PLYREGALVSELTYEAFIATGNGDEP 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
P+ + + LNYT GTT PKGVV ++ + AV++++ W +PK SV LWTLPMFH
Sbjct: 177 GWLPQDEWQAISLNYTSGTTGNPKGVVYHHRGAHLNAVNNVLSWELPKHSVYLWTLPMFH 236
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS-PEAKQ- 299
NGW F W A +VCLR A ++ + +H V+H C APIVLN+L+++ P KQ
Sbjct: 237 CNGWCFPWTLAATAGVSVCLRHVQASAIYEALHEHKVSHFCAAPIVLNMLNNADPALKQG 296
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
LD P++++TAG+ PPA V+ E++G V+H YG TE G V C + W A +
Sbjct: 297 LDHPIKVMTAGAAPPATVIAGMEAMGIAVTHVYGLTETYGPCVLCEPQRSWQGQDATALS 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKARQGV + E+ +++P TG V +DG+T GEIV+RG +M GYLK+P A+++ M
Sbjct: 357 RLKARQGVASPLQGEMRVINPVTGEPVAKDGKTMGEIVLRGNVVMKGYLKNPAASAEAMA 416
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
+G + +GD+ + HPDGY+EIKDRSKD+IISGGENISS E+E VLY HP V+EAAV+ PD
Sbjct: 417 EGWFRSGDLAVWHPDGYVEIKDRSKDIIISGGENISSLEVEDVLYRHPDVDEAAVIAMPD 476
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+PCAFV LK G + TT+ ++I +CR ++ + PK ++F LPKT+TGKV
Sbjct: 477 EKWGEVPCAFVKLKEGRE-----TTQAELIAFCREQMAHFKAPKRIIFTP-LPKTSTGKV 530
Query: 540 QKYVL 544
QK+VL
Sbjct: 531 QKFVL 535
>gi|406038015|ref|ZP_11045379.1| acyl-CoA synthetase [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 548
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/551 (43%), Positives = 343/551 (62%), Gaps = 19/551 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L PAN L+PL ++ERAA +II+ TW Q+Y+RC Q A L+ GI
Sbjct: 6 DELPRTPANFVALSPLRYLERAAYIYPHQAAIIHGKRQITWQQSYQRCRQFAHQLTQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L H+ESK++ VD
Sbjct: 66 QKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLAHAESKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
SL E ++L +V+ D+E +I + YE+ LAKG+P+F
Sbjct: 126 RSLAEEALTLI----SQDIIVIDVFDQEYEGE-----QIALGQY--EYESWLAKGNPEFE 174
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W+ P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+FH
Sbjct: 175 WLLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPLFH 234
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A G TN+CLR+ D +F I +H V + CGAPIVL++L ++P ++
Sbjct: 235 CNGWCFAWSIAASGGTNICLRRVDPVLIFKYIAEHKVDYFCGAPIVLSMLINTPAEQKTA 294
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+ V ++ AG+ PP ++ +G V+H YG TE G + CA + W+ L +E+A
Sbjct: 295 FNHHVEVMVAGAAPPVAIIEGMRHIGINVNHVYGLTETYGPSALCASQAGWSDLSIQEQA 354
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L +RQGV + ++DPET V DGQT GEI+ RG +M GYLK+P+AT + K
Sbjct: 355 QLHSRQGVPYPLQDSMRVLDPETMQPVPNDGQTMGEIMFRGNIVMKGYLKNPQATEEAFK 414
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +PD
Sbjct: 415 GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYRHPAVLTAAVVAKPD 474
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
WQE+PCAF+ LK G + + ++II +C+ + R+ VPK VV I E+PKT+TGK+
Sbjct: 475 ERWQEVPCAFIELKQGASA-----SAEEIIAHCQKELARFKVPKDVV-ITEIPKTSTGKL 528
Query: 540 QKYVLGDIANS 550
QK++L + A
Sbjct: 529 QKFILREWAKQ 539
>gi|332285154|ref|YP_004417065.1| AMP-binding protein [Pusillimonas sp. T7-7]
gi|330429107|gb|AEC20441.1| putative AMP-binding enzyme [Pusillimonas sp. T7-7]
Length = 543
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/545 (43%), Positives = 339/545 (62%), Gaps = 20/545 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L + AN LTP+ F++R+A D +++ +D T+++ YRRC +AS+LS+ GI
Sbjct: 9 LDKSAANYSSLTPISFLQRSAGIFPDKLAVVDDDMMLTYAEFYRRCRSMASALSNIGIKA 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS++ N + E H++VPM GA+ N +NTRLDA T+ IL+H ES+L+F D S
Sbjct: 69 GDTVSLLCFNTHELLESHYSVPMIGAVLNALNTRLDAATLRFILEHGESRLLFYDTEFES 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L+ +V + P LV I +S S +YE+M+A GDP ++W
Sbjct: 129 LVQQVAA---GMESPPLLVSIARLAGVSQGLSAL----------SYEDMIAAGDPDYAWA 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
+ + + D + LNYT GTT PKGVV ++ ++ A+ + + + + +V LWTLPMFH N
Sbjct: 176 KVEDEWDAIALNYTSGTTGNPKGVVYHHRGAYLAAMSNAMAFNMTASTVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS--PEAKQLD 301
GW++TW VG T+VCLRK A V + I+ H VTH+CGAPIVLN+L + L
Sbjct: 236 GWAYTWAITAVGGTHVCLRKVQADHVLSRIQDHKVTHLCGAPIVLNMLLNDFHKNGHTLA 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ T G+ PP+PV+ R + +GF ++H YG TE G + C W+ W L A
Sbjct: 296 ESVQFATGGAAPPSPVIRRAQEIGFDITHLYGLTESYGPSALCVWQNDWEALSTDALAQK 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGV T+ + E+ + +P+ G V DGQT GE++MRG +LM GYLK+ AT + +DG
Sbjct: 356 MARQGVGTLAIDELAVANPDDGGFVPADGQTLGELLMRGNTLMKGYLKNEAATDEAFRDG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ +MHPDGY+E+KDR+KD+IISGGENISS EIE VLY HPMV +AAVV D
Sbjct: 416 WFHTGDLAVMHPDGYVEVKDRAKDIIISGGENISSQEIEEVLYRHPMVLDAAVVAMTDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAF++LK T S E++ I +C+ + + PK +VF ELPKT+TGK++K
Sbjct: 476 WGEVPCAFITLKDDTQSA----NEQEFIDFCKQNMASFKTPKRIVF-GELPKTSTGKIRK 530
Query: 542 YVLGD 546
+L D
Sbjct: 531 NILRD 535
>gi|115436398|ref|NP_001042957.1| Os01g0342900 [Oryza sativa Japonica Group]
gi|21104706|dbj|BAB93295.1| putative adenosine monophosphate binding protein 1 AMPBP1 [Oryza
sativa Japonica Group]
gi|113532488|dbj|BAF04871.1| Os01g0342900 [Oryza sativa Japonica Group]
Length = 597
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 249/563 (44%), Positives = 356/563 (63%), Gaps = 20/563 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYND------TTYTWSQTYRRCLQLASSLSSF-GI 61
AN PLTP+ F+ER A D +I+ +D + TW T RCL+LA++L+ G+
Sbjct: 9 ANHAPLTPISFLERTALVYPDRLAIVASDGSAGVAVSRTWRDTRARCLRLAAALTGLLGV 68
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VV+V A NIPA+ ELHF VPM+GA+ T+N+RLDA +++L+HSE+K+VFVD
Sbjct: 69 QRHDVVAVFAQNIPAVCELHFGVPMAGAVICTLNSRLDAAMAAVLLRHSEAKVVFVDRAL 128
Query: 122 SSLLLEVVSLFPPH-SKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENML----AKG 176
+ + + L ++ P LVLI++ + + S P +I YE++L A
Sbjct: 129 LGVAQKALVLVAEAGARRPVLVLISELLDENERSPPDAKIKVTRVDYEYEHLLSAAAAGS 188
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
P F+ P + +P+ LNYT GTTS PKGV+ ++ ++ ++ ++I + + V LWT
Sbjct: 189 SPDFAIRWPADENEPIALNYTSGTTSRPKGVIYSHRGAYLSSLAAVIVNAMAETPVYLWT 248
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
+PMFH NGW WG A G TNVC+R+ A +F + +HGVTHM GAP VL+++ ++
Sbjct: 249 VPMFHCNGWCQVWGVAAQGGTNVCVRRVTAAAIFDSVARHGVTHMGGAPTVLSMIVNATA 308
Query: 297 AKQLDRP------VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKW 350
++ +P V ++T G+PPP VL R E GF+V H YG TE G C WKP+W
Sbjct: 309 DERRRQPGGRRRRVTVMTGGAPPPPQVLFRMEEQGFLVIHSYGLTETYGPATVCTWKPEW 368
Query: 351 NKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKD 410
+ L A ERA +K+RQG+ +GL D+ DP T SV DG+T GE+++RG ++M GY KD
Sbjct: 369 DALTAEERARIKSRQGLHHVGLEAADVKDPATMRSVPADGRTVGEVMLRGNTVMSGYYKD 428
Query: 411 PEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVN 470
AT++ + G +GD+ + DGY++I DRSKD+IISGGENIS+ E+E+ L+ HP V
Sbjct: 429 GGATAEALAGGWLRSGDLAVREEDGYIKILDRSKDIIISGGENISTVEVEAALFGHPAVE 488
Query: 471 EAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTT-EKDIIQYCRARIPRYMVPKTVVFI- 528
EAAVVGRPD +W E PCAFV L+ G GG E++++ +CRAR+PRYM P+TVV +
Sbjct: 489 EAAVVGRPDEYWGETPCAFVKLRGGGGGGGGGAAVEEELMAFCRARLPRYMAPRTVVVVE 548
Query: 529 DELPKTATGKVQKYVLGDIANSM 551
+ELPKTATGKVQK L + A +M
Sbjct: 549 EELPKTATGKVQKVALRERAKAM 571
>gi|226508458|ref|NP_001147584.1| LOC100281193 [Zea mays]
gi|195612332|gb|ACG27996.1| AMP binding protein [Zea mays]
gi|413935298|gb|AFW69849.1| putative AMP-dependent synthetase and ligase superfamily protein
[Zea mays]
Length = 586
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 260/565 (46%), Positives = 355/565 (62%), Gaps = 25/565 (4%)
Query: 9 ANSCPLTPLGFIERAATACDD-----CPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
AN PLTP+ F+ER A D TW QT RCL+LA++L+ G+
Sbjct: 9 ANHAPLTPISFLERTALVYPDRPAVVAAGHAAAPPPRTWRQTRDRCLRLAAALAGLGVAR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
VV+V A NIPA ELHF +PM+GA+ +N+RLDA S++L+HSE+K+VFVD
Sbjct: 69 RDVVAVFAQNIPAFCELHFGIPMAGAVICALNSRLDAGMASVLLQHSEAKVVFVDAALLG 128
Query: 124 LLLEVVSLFPPH----SKTPKLVLITDD-KEISSSSSPPPRIPPADFVDTYENMLAK--- 175
+ E + L S+ P +VLI + E S+++ +IP D YE +L
Sbjct: 129 VAREALRLISQQAGGASRVPAVVLINEALDEPPSAATGNDKIPGVDRCYEYEALLLSSSR 188
Query: 176 -GDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLL 234
GDP+F P + +P+ LNYT GTTS PKGVV ++ ++ ++ S++ + V L
Sbjct: 189 GGDPEFLIRWPDDENEPIALNYTSGTTSRPKGVVYTHRGAYLNSLSSVLLNDMTALPVYL 248
Query: 235 WTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--- 291
WT+PMFH NGW WG A G TNVCLRK ++ +FA + HGVTHM GAP VL+++
Sbjct: 249 WTVPMFHCNGWCLVWGVAAQGGTNVCLRKVNSGAIFAAVAAHGVTHMGGAPTVLSMVVNA 308
Query: 292 ---SSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKP 348
+P RPV ++T G+PP VL R E LGF+V H YG TE G C W+P
Sbjct: 309 TAEERAPLGAGRKRPVTVMTGGAPPAPQVLFRMEELGFLVIHSYGLTETYGPATVCTWRP 368
Query: 349 KWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYL 408
+W+ LPA ERA++KARQG+ +GL EVD+ DP T SV DG+T GE++ RG ++M GY
Sbjct: 369 EWDALPAAERAAIKARQGLHHLGL-EVDVKDPATMASVPADGRTMGEVMFRGNTVMGGYY 427
Query: 409 KDPEATSKCMKDGRYYTGDVGMMHP-DGYLEIKDRSKDVIISGGENISSTEIESVLYSHP 467
KD AT++ M G +GD+ + H DGY+ I DRSKD+IISGGENIS+ E+E+ L++HP
Sbjct: 428 KDAAATAEAMAGGWLRSGDLAVRHAGDGYVRILDRSKDIIISGGENISTIEVEAALFAHP 487
Query: 468 MVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVF 527
V EAAVVGRPD +W E PCAFV+L+ G + G + E +++ +C+AR+PRYM P+TVVF
Sbjct: 488 AVAEAAVVGRPDEYWGETPCAFVTLREG--AAGSVRAE-EVVAFCQARLPRYMAPRTVVF 544
Query: 528 IDELPKTATGKVQKYVLGDIANSMS 552
+ ELPKTATGKVQK+ L + A +M
Sbjct: 545 VAELPKTATGKVQKFALREQARAMG 569
>gi|421622250|ref|ZP_16063157.1| AMP-binding enzyme [Acinetobacter baumannii OIFC074]
gi|421796234|ref|ZP_16232301.1| AMP-binding enzyme [Acinetobacter baumannii Naval-21]
gi|408696306|gb|EKL41848.1| AMP-binding enzyme [Acinetobacter baumannii OIFC074]
gi|410399749|gb|EKP51933.1| AMP-binding enzyme [Acinetobacter baumannii Naval-21]
Length = 542
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/551 (44%), Positives = 344/551 (62%), Gaps = 22/551 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L PAN L+PL ++ERAA D SII+ + +W QTY+RC Q AS L GI
Sbjct: 6 NELPRTPANFVALSPLRYLERAAYIYPDQASIIHGNRQISWKQTYQRCRQFASQLQQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 VKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDSEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQ 179
+L E +SL P +V+ D+E + F+ + YE LA+GD
Sbjct: 126 VNLAREALSLIPNQHI---IVIDVADEEYEGENQ---------FLGSFEYEEWLAQGDAN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P+ + D + LNYT GTT PKGVV ++ ++ A +++ + ++V LW LP+
Sbjct: 174 FEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWMLPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V LI K+ V + CGAPIVL+++ + P+ KQ
Sbjct: 234 FHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKYKVDYFCGAPIVLSMIINLPKEKQ 293
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++ V ++ AG+ PP V+ ++G V+H YG TE G + CA + W+ L E
Sbjct: 294 PSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSITE 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + +++PET V DG+T GEI+ RG +M GYLK+P+AT +
Sbjct: 354 QAQLHSRQGVPYPLQDSMRVLNPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPKATEEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ + HPDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +
Sbjct: 414 FAGGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LKTG T ++II++C+ + R+ VPK VV I E+PKT+TG
Sbjct: 474 PDERWQEVPCAFIELKTGAS-----VTPEEIIEHCQKELARFKVPKDVV-ITEIPKTSTG 527
Query: 538 KVQKYVLGDIA 548
K+QK++L + A
Sbjct: 528 KLQKFILREWA 538
>gi|423014980|ref|ZP_17005701.1| AMP-dependent synthetase and ligase family protein [Achromobacter
xylosoxidans AXX-A]
gi|338782020|gb|EGP46398.1| AMP-dependent synthetase and ligase family protein [Achromobacter
xylosoxidans AXX-A]
Length = 550
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/552 (44%), Positives = 349/552 (63%), Gaps = 22/552 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PLTPLGF+E AA + P++++ D + W TY RC ++A++L+++ +
Sbjct: 12 LPRNAANHRPLTPLGFLEWAAAVYPERPALLHGDRSQNWRATYERCRRMAAALAAWDVRR 71
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+V+APN PA+YE HF VPM+GA+ N +NTRLDART++ IL+H + ++ D ++
Sbjct: 72 GDVVAVLAPNTPALYEAHFGVPMAGAVLNALNTRLDARTLAFILEHGGATVLLYDSEYAA 131
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT-YENMLAKGDPQFSW 182
L+ EV+ H + P + +D E + P D D YE LA W
Sbjct: 132 LVREVLG----HLRAPPRTVRIEDSEYAG--------PHGDLGDAEYEAWLAAQPADAPW 179
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P+ + D + LNYT GTT PKGV+ ++ ++ A +++ +P +V LWTLPMFH
Sbjct: 180 QGPQDEWDNLCLNYTSGTTGNPKGVLYHHRGAYLNATGNVLACGMPPHAVYLWTLPMFHC 239
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQL 300
NGW F W A + TNVCLR+ + +FA IR+H V C AP+VLN+L ++P +
Sbjct: 240 NGWCFPWTMAALAGTNVCLRRVEPAAIFAAIRRHQVGFFCAAPVVLNMLVNAPADVRHRA 299
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
V+ +T G+ PPA ++ E LG V+H YG TE G ++SCAW +W+ LP ERA+
Sbjct: 300 THRVQAMTGGAAPPAAIIEAMEQLGVGVTHLYGLTETYGPSISCAWHEEWDDLPLAERAA 359
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
LKAR GVR + + V ++D + V DG T GEI++RG +LM GYL + +AT++
Sbjct: 360 LKARIGVRKLNVEAVRVMDADL-RPVPADGATLGEIMLRGNTLMKGYLHNLDATAEAFAG 418
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +++GD+ ++HPDGY+EIKDR+KD+IISGGENIS+ EIESVLY HP V EAAVV RPD
Sbjct: 419 GWFHSGDLAVVHPDGYIEIKDRAKDIIISGGENISTVEIESVLYRHPDVLEAAVVARPDA 478
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E PCAFV+LK G G D+I YCR + R+ P+TV+F LPKT+TGK+Q
Sbjct: 479 VWGETPCAFVTLKEGAACGA-----DDLIAYCREHLARFKAPRTVLF-GALPKTSTGKIQ 532
Query: 541 KYVLGDIANSMS 552
K+VL + A +++
Sbjct: 533 KFVLREQAAALA 544
>gi|22758280|gb|AAN05508.1| Putative AMP-binding protein [Oryza sativa Japonica Group]
Length = 561
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 254/565 (44%), Positives = 348/565 (61%), Gaps = 29/565 (5%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ P+ AN PLTP+ F+ERAA D +++ Y+W +T RCL AS+L+ G
Sbjct: 1 MEGCMPSDANYAPLTPVSFLERAAVVYGDRTAVVSGGREYSWRETRERCLAGASALARLG 60
Query: 61 INPGHV-----------VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKH 109
+ V V+VIA NIPAMYELHF+VPM+G + T+NTR DA +S++L+H
Sbjct: 61 VGRRDVLSTRHGLIAGQVAVIAANIPAMYELHFSVPMAGGVLCTLNTRHDAAMVSVLLRH 120
Query: 110 SESKLVFVDHLSSSLLLEVVSLFP-PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT 168
SE+K+ V+ ++ + + L +K P ++ I+D + SSS
Sbjct: 121 SEAKVFLVESQFLAVAHDALRLLADAKAKFPLVIAISDTGDSSSSDG---------GGLE 171
Query: 169 YENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVP 228
YE +L F P + DP+ LNYT GTTS PKGV+ ++ ++ ++ +L+ +
Sbjct: 172 YEALLRDAPRGFEIRWPADERDPISLNYTSGTTSRPKGVIYSHRGAYLNSLAALLCNDMT 231
Query: 229 KQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVL 288
V LWT+PMFH NGW W A G TN+C+R +F I +HGVT+M GAP VL
Sbjct: 232 SMPVYLWTVPMFHCNGWCMAWATAAQGGTNICVRNVVPKVIFEQIVRHGVTNMGGAPTVL 291
Query: 289 NLLSSSP--EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAW 346
N++ ++P E + L R V I T G+PPP VL + E LGF V HGYG TE G C W
Sbjct: 292 NMIVNAPASERRPLPRRVLISTGGAPPPPQVLAKMEELGFNVQHGYGLTETYGPATRCVW 351
Query: 347 KPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLG 406
+P+W+ LP ERA +KA QGV+ L +VDI DP T SV DG+ GE+++RG ++M G
Sbjct: 352 RPEWDALPLAERARIKALQGVQHQMLQDVDIKDPVTMASVPSDGRAVGEVMLRGNTVMSG 411
Query: 407 YLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSH 466
Y KD AT + M+ G TGD+G+ HPDGY+++KDR+KD+IISGGENISS E+ESVL+ H
Sbjct: 412 YYKDAAATEEAMRGGWLRTGDLGVRHPDGYIQLKDRAKDIIISGGENISSIEVESVLFGH 471
Query: 467 PMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVV 526
V +AAVV RPD W E CAFV+LK G + T +II +CRAR+PRYM P+TVV
Sbjct: 472 HAVLDAAVVARPDDHWGETACAFVTLKDGASA-----TAHEIIAFCRARLPRYMAPRTVV 526
Query: 527 FIDELPKTATGKVQKYVLGDIANSM 551
F D LPKT+TGK QK++L + A +M
Sbjct: 527 FGD-LPKTSTGKTQKFLLREKARAM 550
>gi|406835433|ref|ZP_11095027.1| acyl-CoA synthetase [Schlesneria paludicola DSM 18645]
Length = 549
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/548 (43%), Positives = 339/548 (61%), Gaps = 13/548 (2%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P AN PLTPL F+ RAA + + I+ ++++ RC +LAS+L GI
Sbjct: 15 LDPVAANYAPLTPLSFLARAAAVYPERSAWIHGARRASYAEFATRCRRLASALIQRGIGV 74
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+APN+P M E H+ +PM+GA+ N +N RLDA I+ +L+H ++K++ D S+
Sbjct: 75 GDTVAVMAPNVPPMLEAHYGIPMTGAVLNALNIRLDAAAIAFMLEHGDAKILITDREYST 134
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ +SL + LV+ +D E + + + YE LA GD F+
Sbjct: 135 TIEAALSLLKEKGRE-LLVIDINDPEYTGAGKSLGEL-------DYEAFLATGDADFAPT 186
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PK VV ++ +++A+ +L+ W + V LWTLPMFH N
Sbjct: 187 APAHEWDAIALNYTSGTTGNPKAVVYHHRGAYLLAMGNLLAWNMTAAPVYLWTLPMFHCN 246
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW F W + V T+VCLRK D+ +F I +H VTH+CGAPIVLNLL ++PE + +
Sbjct: 247 GWCFPWTLSAVCGTHVCLRKVDSAAIFRAISEHRVTHLCGAPIVLNLLVNAPEKVRFEHT 306
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
+ I+TA S PP+ V+ E +GF V+H YG TE+ G C W P+W++LP ERA LK+
Sbjct: 307 IEIMTAASAPPSSVIAAMEGMGFHVTHVYGLTEVYGPATVCDWHPEWDQLPLEERARLKS 366
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQGV L + + DP T DG+T GE++MRG +M GYLK+ +AT + + G +
Sbjct: 367 RQGVNYAVLEGLMVADPTTMEPCPADGKTLGEVMMRGNIVMKGYLKNRQATEEAFRGGWF 426
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
+TGD+ + HPDGY+E+KDRSKD+II+GGEN+S+ E+E LY HP V + AVV RPD W
Sbjct: 427 HTGDLAVTHPDGYIELKDRSKDIIITGGENVSTIEVEDALYKHPAVMDVAVVARPDEKWG 486
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E PCAF+ LK + TT ++II +CR ++ + VPKTVVF LP+T+TGK+QK+V
Sbjct: 487 ETPCAFICLKPDAQA----TTSQEIIAFCRQQMAGFKVPKTVVF-GPLPRTSTGKIQKHV 541
Query: 544 LGDIANSM 551
L D A +
Sbjct: 542 LRDKARQL 549
>gi|237654190|ref|YP_002890504.1| acyl-CoA synthetase [Thauera sp. MZ1T]
gi|237625437|gb|ACR02127.1| AMP-dependent synthetase and ligase [Thauera sp. MZ1T]
Length = 546
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/553 (45%), Positives = 338/553 (61%), Gaps = 23/553 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PL+PL FIER A S+++ YTWSQTY RC +LAS+L + G+
Sbjct: 10 LDKNAANYVPLSPLSFIERTAMVYPTRTSVVHGTLIYTWSQTYERCRRLASALVAHGVKK 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PN+P+M+E HF VPM+GA+ NT+NTRLDA I+ +L+H E+K++ D +
Sbjct: 70 GDTVACMLPNVPSMFEAHFGVPMTGAVLNTLNTRLDADAIAFMLQHGEAKVLITDPEFAG 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQFS 181
++ + L P P +V D P P + + T YE+ LA G+P F
Sbjct: 130 VVRAALELLP--GDKPLVVDALD-----------PEYPGTERIGTVLYEDFLAGGNPDFQ 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P+ + D + LNYT GTT PKGVV ++ ++ A ++I W +P+ S LWTLPMFH
Sbjct: 177 WKLPEDEWDAIALNYTSGTTGNPKGVVYHHRGAYLNAASNIISWGMPQHSSYLWTLPMFH 236
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A NVCLRK D ++ LIR+H VTHMCGAPIV +L ++PE +
Sbjct: 237 CNGWCFPWTMAANAGVNVCLRKVDPALIYELIRRHKVTHMCGAPIVYGMLINAPEGLRAG 296
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
++ V L AG+ PPA ++ E +GF ++H YG TE G CA P+W+ LP RA
Sbjct: 297 IEHSVAGLIAGAAPPAAIIEGAEKIGFDITHVYGLTETYGPASVCAKHPEWDALPIDRRA 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
RQGVR + ++DP T V DG+T GEI+ RG +M GYLK+ +AT +
Sbjct: 357 ERNGRQGVRYHMQEAITVLDPVTMEPVPADGETMGEIMFRGNLVMKGYLKNEKATQESFA 416
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+ +MHPDGY++IKDRSKDVIISGGENISS E+E VLY HP V AAVV +PD
Sbjct: 417 GGWFHTGDLAVMHPDGYVKIKDRSKDVIISGGENISSLEVEEVLYRHPAVLTAAVVAKPD 476
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+P A++ +K G T DII +CR + RY VPK + F LPKT+TGK+
Sbjct: 477 EKWGEVPAAYIEVKEGAG-----VTADDIIAHCREHLARYKVPKFIEFC-VLPKTSTGKI 530
Query: 540 QKYVLGDIANSMS 552
QK+ L ++A S S
Sbjct: 531 QKFALREMAKSAS 543
>gi|423206726|ref|ZP_17193282.1| hypothetical protein HMPREF1168_02917 [Aeromonas veronii AMC34]
gi|404622278|gb|EKB19143.1| hypothetical protein HMPREF1168_02917 [Aeromonas veronii AMC34]
Length = 544
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/545 (44%), Positives = 341/545 (62%), Gaps = 24/545 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN LTP+ F+ RA D P++I++ +W +T RRC QLAS+L GI
Sbjct: 15 LAKTAANFEALTPISFLGRAERVYPDYPALIHDSLRQSWGETARRCRQLASALRLSGIGE 74
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS++APNIPAM+E HF VPMSGA+ NTINTRLDA +++ I +H++SK+V VD
Sbjct: 75 GDTVSIVAPNIPAMFEAHFGVPMSGAVLNTINTRLDAESMAFIFQHAQSKVVLVDREFGP 134
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD--TYENMLAKGDPQFS 181
++ + + L ++ LV+ DD P V TYE +A G+
Sbjct: 135 VVRKALDLL----ESQPLVIAIDD----------PLYREGALVSELTYEAFIATGNGDEP 180
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
P+ + + LNYT GTT PKGVV ++ + A+++++ W +PK V LWTLPMFH
Sbjct: 181 GWLPEDEWQAISLNYTSGTTGNPKGVVYHHRGAHLNAINNVLSWELPKHPVYLWTLPMFH 240
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQ 299
NGW F W A +VCLR A ++ + +H V+H C APIVLN+L+++ +A +
Sbjct: 241 CNGWCFPWTLAATAGVSVCLRHVQASAIYEALHEHRVSHFCAAPIVLNMLNNADQALKQG 300
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
LD P++++TAG+ PPA V+ E++G V+H YG TE G V C + W A +
Sbjct: 301 LDHPIKVMTAGAAPPATVIAGMEAMGIAVTHVYGLTETYGPCVLCEPQRSWQGQDATTLS 360
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKARQGV + E+ +V P +G V RDG+T GEIV+RG +M GYLK+P A+++ M
Sbjct: 361 RLKARQGVASPLQGEMRVVHPVSGEPVPRDGKTMGEIVLRGNVVMKGYLKNPAASAEAMA 420
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
DG + +GD+ + HPDGY+EIKDRSKD+IISGGENISS E+E VLY HP V+EAAV+ PD
Sbjct: 421 DGWFRSGDLAVWHPDGYVEIKDRSKDIIISGGENISSLEVEDVLYRHPDVDEAAVIAMPD 480
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+PCAFV LK G + TT+ ++I +CR ++ + PK ++F LPKT+TGKV
Sbjct: 481 EKWGEVPCAFVKLKEGRE-----TTQAELIAFCREQMAHFKAPKRIIFT-PLPKTSTGKV 534
Query: 540 QKYVL 544
QK+VL
Sbjct: 535 QKFVL 539
>gi|386395314|ref|ZP_10080092.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM1253]
gi|385735940|gb|EIG56136.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM1253]
Length = 549
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 249/549 (45%), Positives = 340/549 (61%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PL+PL F+ R+A D S +Y ++TW +T+ RC + AS L+ GI
Sbjct: 12 LDKTPANYVPLSPLSFLARSAAVYPDHVSTVYEGRSFTWRETHERCKRFASYLAGQGIGV 71
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM E+HFAVPM+GA+ N +N RLDA +I+ L H +K++ VD S
Sbjct: 72 GDTVAAMLPNIPAMNEVHFAVPMTGAVLNGLNIRLDAPSIAFQLDHGGAKIILVDPEFSG 131
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + +S S V+ DD RI + YE LA+GDP F+ +
Sbjct: 132 VITDALSQM---SGPKPFVIDVDDAAFKGGG----RIGEIE----YEAALAQGDPDFAAI 180
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + L+YT GTT PKGVV ++ ++ AV +++ + + V LWTLPMFH N
Sbjct: 181 LPGDEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGQLGQHPVYLWTLPMFHCN 240
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W A NVCLRK + +F LI++HGVTHMCGAPIV N L ++P+A +
Sbjct: 241 GWCFPWTIAAAAGINVCLRKVEPTKIFELIKQHGVTHMCGAPIVYNTLINAPDAPKGGAA 300
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R V L AG+ PP VL ES+G ++H YG TE+ G CA +P W+ LPA ERASL
Sbjct: 301 RHVVGLIAGAAPPVAVLEGAESIGIKLTHVYGLTEVYGPASVCAEQPGWDDLPAAERASL 360
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K RQGV V ++DP+T V RDG+T GE++ RG +M GYLK+ +AT + + G
Sbjct: 361 KRRQGVPYPLEEAVTVIDPQTMRQVPRDGETIGEVMFRGNIVMKGYLKNDKATKEAFEGG 420
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++ GY+ IKDRSKD+IISGGENISS E+E +LY HP V AAVV +PDP
Sbjct: 421 WFHTGDLGVLDAHGYVIIKDRSKDIIISGGENISSVEVEDILYKHPAVLFAAVVAKPDPK 480
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK G + +E DII +CR+ + + PK VVF +PKT+TGK+QK
Sbjct: 481 WGEVPCAFVELKDGASA-----SEADIIAFCRSHMSGFKTPKAVVF-GPIPKTSTGKIQK 534
Query: 542 YVLGDIANS 550
++L + A S
Sbjct: 535 FLLRNEAGS 543
>gi|374575513|ref|ZP_09648609.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM471]
gi|374423834|gb|EHR03367.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM471]
Length = 549
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 248/545 (45%), Positives = 341/545 (62%), Gaps = 21/545 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+PL F+ R+A D S +Y ++TW +T+ RC + AS L+ GI G V+
Sbjct: 17 ANYVPLSPLSFLARSAAVYPDHVSTVYEGRSFTWRETHERCKRFASYLAGKGIGVGDTVA 76
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PNIPAM E+HFAVPM+GA+ N +N RLDA +I+ L H +K++ VD SS++ +
Sbjct: 77 AMLPNIPAMNEVHFAVPMTGAVLNALNIRLDAPSIAFQLDHGGAKIILVDPEFSSVITDA 136
Query: 129 VSLFPPHSKTPK-LVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKS 187
++ PK V+ DD RI + YE LA+GDP F+ + P
Sbjct: 137 LA----QMTGPKPFVIDVDDAAFKGGR----RIGEIE----YEAALAQGDPDFAAILPGD 184
Query: 188 DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSF 247
+ D + L+YT GTT PKGVV ++ ++ AV +++ + + V LWTLPMFH NGW F
Sbjct: 185 EWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGQLGQHPVYLWTLPMFHCNGWCF 244
Query: 248 TWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRI- 306
W A NVCLRK + +F LI++HGVTHMCGAPIV N L ++P+A + + R+
Sbjct: 245 PWTIAAAAGINVCLRKVEPTKIFELIKQHGVTHMCGAPIVYNTLINAPDAPKGNAARRVV 304
Query: 307 -LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
L AG+ PP VL ESLG ++H YG TE+ G CA +P W+ LPA ERASLK RQ
Sbjct: 305 GLIAGAAPPVAVLEGAESLGIKLTHVYGLTEVYGPASVCAEQPGWDDLPAAERASLKRRQ 364
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYT 425
GV V ++DP+T V RDG+T GE++ RG +M GYLK+ +AT + + G ++T
Sbjct: 365 GVPYPLEEAVTVIDPQTMRQVPRDGETIGEVMFRGNIVMKGYLKNDKATQEAFEGGWFHT 424
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+G++ GY+ IKDRSKD+IISGGENISS E+E +LY HP V AAVV +PDP W E+
Sbjct: 425 GDLGVLDAHGYVIIKDRSKDIIISGGENISSVEVEDILYKHPAVLFAAVVAKPDPKWGEV 484
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLG 545
PCAFV LK G + +E DII +CR+ + + PK VVF +PKT+TGK+QK++L
Sbjct: 485 PCAFVELKDGASA-----SEADIIAFCRSHMSGFKTPKAVVF-GPIPKTSTGKIQKFLLR 538
Query: 546 DIANS 550
+ A S
Sbjct: 539 NEAGS 543
>gi|334704897|ref|ZP_08520763.1| AMP-binding protein [Aeromonas caviae Ae398]
Length = 540
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 247/545 (45%), Positives = 338/545 (62%), Gaps = 24/545 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN LTPL F+ RAA D P++I+ +W+QT RRC QLAS+L GI
Sbjct: 11 LGKTPANFEALTPLSFLGRAARVYPDYPALIHGTLRQSWAQTERRCRQLASALRRRGIGE 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS++APN+PAM+E HF VPMSGA+ NTINTRLDA ++ I +H++SK+V VD +
Sbjct: 71 GDTVSIVAPNVPAMFEAHFGVPMSGAVLNTINTRLDADAMAFIFQHAQSKVVLVDREFGA 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQFS 181
++ + +SL + LV+ DD P + V YE +A GD
Sbjct: 131 VVRKALSLI----DSQPLVIAIDD----------PLYREGELVGELDYEGFIALGDGDEP 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
P + + LNYT GTT PKGVV ++ + A+++ + W +PK V LWTLPMFH
Sbjct: 177 GWLPADEWQAISLNYTSGTTGNPKGVVYHHRGAHLNAINNALSWELPKHPVYLWTLPMFH 236
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS-PEAKQ- 299
NGW F W A +VCLR A ++ +R+H V+H C APIVLN+L+++ P KQ
Sbjct: 237 CNGWCFPWTLAATAGVSVCLRHVQAAAIYGALREHKVSHFCAAPIVLNMLNNADPALKQG 296
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
LD PV+ +TAG+ PPA V+ E++G V+H YG TE G V C + +W A +
Sbjct: 297 LDHPVKAMTAGAAPPATVIAGMEAMGIAVTHVYGLTETYGPCVVCEPQRRWQGQDAATLS 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKARQGV + E+ +++P +G V DG+T GEIV+RG +M GYLK+P A+ + M
Sbjct: 357 RLKARQGVASPLQGEMRVINPVSGEPVPMDGKTLGEIVLRGNIVMKGYLKNPAASEEEMA 416
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G + +GD+ + HPDGY+EIKDRSKD+IISGGENISS E+E VLY HP V EAAV+ PD
Sbjct: 417 QGWFRSGDLAVWHPDGYVEIKDRSKDIIISGGENISSLEVEDVLYRHPDVEEAAVIAMPD 476
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+PCAFV LK G + T+ ++I +CR ++ + PK ++F LPKT+TGKV
Sbjct: 477 ETWGEVPCAFVKLKEGRE-----LTQAELIAFCREQMAHFKAPKRIIFT-PLPKTSTGKV 530
Query: 540 QKYVL 544
QK++L
Sbjct: 531 QKFML 535
>gi|293337111|ref|NP_001169640.1| uncharacterized protein LOC100383521 [Zea mays]
gi|224030593|gb|ACN34372.1| unknown [Zea mays]
gi|414864657|tpg|DAA43214.1| TPA: putative AMP-dependent synthetase and ligase superfamily
protein [Zea mays]
Length = 559
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 251/546 (45%), Positives = 348/546 (63%), Gaps = 9/546 (1%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTPL F+ERAA D +++ D ++W +T RCL A++L+ G+ VV+
Sbjct: 9 ANYVPLTPLSFLERAAVVYGDRAAVVCGDRRFSWRETRERCLAGAAALARLGVGRRDVVA 68
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
VIA N+PAMYELHF+VPM+GA+ T+NTR DA +S++LKHSE+K+ V+ ++ +
Sbjct: 69 VIASNVPAMYELHFSVPMTGAVLCTLNTRHDAAMVSVLLKHSEAKVFLVESQFHAVARDA 128
Query: 129 VSLFP-PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKS 187
+ L + P ++ ++D SS+ + V YE +L F P
Sbjct: 129 LRLLADAKDRLPLVITVSDPSSSSSTGDGRGSNDGSVAVAEYEALLRSAPRDFEIRWPAD 188
Query: 188 DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSF 247
+ DP+ LNYT GTTS PKGV+ ++ F+ + +++ + V LWT+PMFH NGW
Sbjct: 189 ERDPISLNYTSGTTSRPKGVIYSHRGAFLNTLATVLVNEMATMPVYLWTVPMFHCNGWCM 248
Query: 248 TWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLDRPVR 305
W A G T+VC+ VF I +HGVT+M GAP VL++L+++P A K L R VR
Sbjct: 249 VWATAAQGGTSVCIGSVSPGVVFDHIVRHGVTNMGGAPTVLSMLANAPAADRKPLPRRVR 308
Query: 306 ILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
I T G+PPP VL + + LGF V+HGYG TE G +C WKP+W+ LP ERA +KA Q
Sbjct: 309 ISTGGAPPPPQVLAKMDELGFDVAHGYGLTETYGPATTCVWKPEWDALPPAERARMKALQ 368
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYT 425
GV + EV I DP + ++ DG+ GE+++RG ++M GY KD AT + M+ G T
Sbjct: 369 GVAHAMVQEVAIKDPASMETLPSDGRAVGEVMLRGNTVMGGYYKDAGATEEAMRGGWLRT 428
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+G+ HP+GY+++KDRSKD+IISGGENISS E+ESVL+ HP V +AAVV RPD W E
Sbjct: 429 GDLGVRHPNGYIQLKDRSKDIIISGGENISSIEVESVLFGHPAVLDAAVVARPDDHWGEA 488
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLG 545
PCAFV+L+ G + T DII++CRAR+P YM P+TVVF D LPKT+TGK QKY+L
Sbjct: 489 PCAFVTLRDGARA-----TADDIIRFCRARLPHYMAPRTVVFSD-LPKTSTGKTQKYLLR 542
Query: 546 DIANSM 551
+ A +M
Sbjct: 543 EKARAM 548
>gi|330829571|ref|YP_004392523.1| AMP-binding protein [Aeromonas veronii B565]
gi|423209789|ref|ZP_17196343.1| hypothetical protein HMPREF1169_01861 [Aeromonas veronii AER397]
gi|328804707|gb|AEB49906.1| AMP-binding protein [Aeromonas veronii B565]
gi|404617647|gb|EKB14583.1| hypothetical protein HMPREF1169_01861 [Aeromonas veronii AER397]
Length = 540
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/545 (44%), Positives = 341/545 (62%), Gaps = 24/545 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN LTP+ F+ RA D P++I+ +W +T RRC QLAS+L GI
Sbjct: 11 LAKTAANFEALTPISFLGRAERVYPDYPALIHGSLRQSWGETARRCRQLASALRLRGIGE 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS++APNIPAM+E HF VPMSGA+ NTINTRLDA +++ I +H++SK+V VD +
Sbjct: 71 GDTVSIVAPNIPAMFEAHFGVPMSGAVLNTINTRLDAESMAFIFQHAQSKVVLVDREFGA 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQFS 181
++ + + L ++ LV+ DD P V YE LA+G
Sbjct: 131 VVRKALDLL----ESQPLVIAIDD----------PIYREGALVSDLDYEQFLAQGSGDEP 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
P+ + + LNYT GTT PKGVV ++ + A+++++ W +PK V LWTLPMFH
Sbjct: 177 GWLPQDEWQAISLNYTSGTTGNPKGVVYHHRGAHLNAINNVLSWELPKHPVYLWTLPMFH 236
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS-PEAKQ- 299
NGW F W A +VCLR A ++ + +H V+H C APIVLN+L+++ P KQ
Sbjct: 237 CNGWCFPWTLAATAGVSVCLRHVQAAAIYEALHEHRVSHFCAAPIVLNMLNNADPALKQG 296
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
LD P++++TAG+ PPA V+ E++G V+H YG TE G V C + W A +
Sbjct: 297 LDHPIKVMTAGAAPPATVIAGMEAMGIAVTHVYGLTETYGPCVLCEPQRSWQGQDATALS 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKARQGV + E+ +++P +G V +DG+T GEIV+RG +M GYLK+P A+++ M
Sbjct: 357 RLKARQGVASPLQGEMRVINPVSGEPVAKDGKTMGEIVLRGNVVMKGYLKNPAASAEAMA 416
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
+G + +GD+ + HPDGY+EIKDRSKD+IISGGENISS E+E VLY HP V+EAAV+ PD
Sbjct: 417 EGWFRSGDLAVWHPDGYVEIKDRSKDIIISGGENISSLEVEDVLYRHPDVDEAAVIAMPD 476
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+PCAFV LK G + TT+ ++I +CR ++ + PK ++F LPKT+TGKV
Sbjct: 477 EKWGEVPCAFVKLKEGRE-----TTQAELIAFCREQMAHFKAPKRIIFTP-LPKTSTGKV 530
Query: 540 QKYVL 544
QK+VL
Sbjct: 531 QKFVL 535
>gi|422323249|ref|ZP_16404288.1| AMP-dependent synthetase and ligase [Achromobacter xylosoxidans
C54]
gi|317401767|gb|EFV82384.1| AMP-dependent synthetase and ligase [Achromobacter xylosoxidans
C54]
Length = 550
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 246/546 (45%), Positives = 341/546 (62%), Gaps = 22/546 (4%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L N AN PLTPLGF+ AA + ++++ D + +W TY RC Q+A++L+++G+
Sbjct: 10 DTLPRNAANHQPLTPLGFLAWAAAVYPERAALLHGDRSQSWRATYDRCRQMAAALAAWGV 69
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
G VV+V+APN PA+YE HF VPM+GA+ N +NTRLDART++ IL+H + ++ D
Sbjct: 70 RRGDVVAVLAPNTPALYEAHFGVPMAGAVLNALNTRLDARTLAFILEHGGATVLLYDSEY 129
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT-YENMLAKGDPQF 180
+ L+ EV+ H + P + +D E + S D D YE LA
Sbjct: 130 APLVREVLG----HLRAPPRTVRIEDSEYTGSHG--------DLGDAEYEAWLAAQPADA 177
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
W P+ + D + LNYT GTT PKGV+ ++ ++ A +++ +P +V LWTLPMF
Sbjct: 178 PWEGPRDEWDNLCLNYTSGTTGNPKGVLYHHRGAYLNATGNVLACGMPPHAVYLWTLPMF 237
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AK 298
H NGW F W A + TNVCLR+ + +F IR+H V C AP+VLN+L ++P
Sbjct: 238 HCNGWCFPWTMAALAGTNVCLRRVEPAAIFEAIRRHRVGFFCAAPVVLNMLVNAPADARH 297
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
+ V+ +T G+ PPA ++ E LG V+H YG TE G ++SCAW +W+ P ER
Sbjct: 298 RATHRVQAMTGGAAPPAAIIEAMEQLGVGVTHLYGLTETYGPSISCAWHDEWDDRPLAER 357
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A+LKAR GVR + + V ++D V DG T GEI++RG +LM GYL +PEAT+
Sbjct: 358 AALKARIGVRKLNVEAVQVMDAAM-RPVPADGATLGEIMLRGNTLMKGYLHNPEATADAF 416
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
G +++GD+ ++HPDGY+EIKDR+KD+IISGGENIS+ EIESVLY HP V EAAVV RP
Sbjct: 417 AGGWFHSGDLAVVHPDGYIEIKDRAKDIIISGGENISTVEIESVLYCHPDVLEAAVVARP 476
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
D W E PCAFV+LK G G D+I YCR + R+ P+TVVF LPKT+TGK
Sbjct: 477 DAVWGETPCAFVTLKDGAACGA-----DDLIAYCREHLARFKTPRTVVF-GALPKTSTGK 530
Query: 539 VQKYVL 544
+QK+VL
Sbjct: 531 IQKFVL 536
>gi|145588698|ref|YP_001155295.1| AMP-dependent synthetase/ligase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145047104|gb|ABP33731.1| AMP-dependent synthetase and ligase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 551
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/549 (44%), Positives = 345/549 (62%), Gaps = 15/549 (2%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ NPAN P+TP+ F+ER+A + +II+ TW QTY RC +LAS+L GI
Sbjct: 10 LERNPANYTPITPILFLERSAEIYPNKTAIIHGKLRQTWQQTYERCRRLASALQKRGIGL 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PN P M E HF +PM+GA+ N +NTRLDA +++ +L H E+K+V VD S
Sbjct: 70 GDTVAVMLPNTPPMVEAHFGIPMAGAVLNALNTRLDAESVAFMLNHGEAKVVIVDPEFSG 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + + S LV+ ++KE + TY+ +L++GDP+F +
Sbjct: 130 VMKKALEIVKKDSGREILVIDVEEKEFDVPGECLGTV-------TYDQLLSEGDPEFPLI 182
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + LNYT GTT PKGVV ++ I AV +++DW + K + LWTLPMFH N
Sbjct: 183 VPEDEWQAICLNYTSGTTGNPKGVVYHHRGAAINAVSNVLDWDINKHPIYLWTLPMFHCN 242
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW F W A NVCLR+ DA +FA I++HGVTH C APIV NLL ++P+ ++ P
Sbjct: 243 GWCFPWTIAARAGVNVCLRRVDAQHIFAAIKEHGVTHYCAAPIVHNLLVNAPDELKVGVP 302
Query: 304 --VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ L AG+ PPA ++ E LGF ++H YG TE+ G C + +WN + ERA L
Sbjct: 303 SGVKGLIAGAAPPASIIEGMEKLGFDLTHVYGLTEVYGPAAVCVKQDEWNDVDIGERARL 362
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGVR +D++DPET V DG+T GEI+ +G M GYLK+ +AT + + G
Sbjct: 363 NARQGVRYHMQQAIDVIDPETMQPVPADGETMGEIMFKGNIAMKGYLKNEKATKEAFEGG 422
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+ + +PDGY+++KDRSKD+IISGGENISS E+E VLY HP VN AAVV +PDP
Sbjct: 423 WFHSGDLAVKNPDGYVKMKDRSKDIIISGGENISSVEVEDVLYRHPAVNAAAVVAKPDPK 482
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PC F+ +K G + T +++I +C+ + + VP+ +VF ELPKT+TGK+QK
Sbjct: 483 WGETPCTFLEIKPGAE-----VTVEEMIAHCKQHLAGFKVPRAIVFC-ELPKTSTGKIQK 536
Query: 542 YVLGDIANS 550
+ L A S
Sbjct: 537 FELRKQAGS 545
>gi|406705604|ref|YP_006755957.1| AMP-binding protein [alpha proteobacterium HIMB5]
gi|406651380|gb|AFS46780.1| AMP-binding enzyme [alpha proteobacterium HIMB5]
Length = 538
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/543 (43%), Positives = 335/543 (61%), Gaps = 18/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PLTPL F+ERA + +++Y + +YTWS YRRC + AS+L GI
Sbjct: 8 LDKNDANFVPLTPLTFLERAKDIYPNYEALVYENRSYTWSDVYRRCTKFASALEKIGIGL 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VSV+A N P ++E H++VPM+GAI NTIN RLDA+T+ IL+HSE+K+ VD S
Sbjct: 68 GDTVSVMAMNTPEIFEAHYSVPMTGAILNTINVRLDAKTVQYILEHSEAKVFIVDRQFHS 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ +V+ P ++ I DD + S +I + YE+ L GD + W
Sbjct: 128 VISKVMEQL---KNKPIIIDIQDD---FADQSLLKKIGEHE----YEDFLNTGDDNYIWK 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
RPK + + LNYT GTT PKGVV ++ ++++ S + W +P + L +PMFH N
Sbjct: 178 RPKDEWQAISLNYTSGTTGNPKGVVYHHRGSYLMSTGSAVAWNMPNRLSFLTIVPMFHCN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW + W ++ VCLR D +F LI KH VTH GAPIVLN+++ + E K+L+
Sbjct: 238 GWGYPWTIPMLNGKTVCLRNIDVKKIFELIIKHKVTHFGGAPIVLNMITGASEKDRKKLE 297
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V +LTAG+PPP+ + + E+LGF V H YG TE G CAW +WN L ++ +
Sbjct: 298 HKVYVLTAGAPPPSIIFKKMEALGFEVMHVYGLTETYGHVSQCAWNDEWNSLDEDKKNEI 357
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR ++ +++PE V +DG+T GEI++RG +M GY KD AT K M G
Sbjct: 358 KARQGVRYPNTEDIKVMNPENMEPVPQDGKTMGEIMIRGNVVMKGYFKDKAATDKAMNGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+ + HPDGY++I+DRSKD+IISGGENISS EIE+ L HP V+ AAVV +PD
Sbjct: 418 WFHSGDLAVAHPDGYIKIQDRSKDIIISGGENISSIEIENTLSKHPAVSIAAVVAKPDEK 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+P AF+ D T+K+++ +CR + + +PK + F ELPKT+TGK+QK
Sbjct: 478 WGEVPAAFIEKVKDKD-----VTDKELMDFCRETLAGFKIPKYIEFC-ELPKTSTGKIQK 531
Query: 542 YVL 544
+ L
Sbjct: 532 FEL 534
>gi|388267622|gb|AFK25809.1| acyl-activating enzyme-like protein [Petunia x hybrida]
Length = 512
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 240/506 (47%), Positives = 330/506 (65%), Gaps = 27/506 (5%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD L AN PLTPL F+ RA + + SIIY +TW QTY+RC +LASSL S
Sbjct: 1 MDELPKCGANYVPLTPLTFLTRAFKSYANRTSIIYAGARFTWEQTYKRCCRLASSLQSLN 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH- 119
I VVSV+APN+PA YE+HFAVPM+GA+ NTINTRLD I+IILKHSE+KL+FVD+
Sbjct: 61 IVKNDVVSVLAPNVPATYEMHFAVPMAGAVLNTINTRLDPMNIAIILKHSEAKLLFVDYE 120
Query: 120 ------LSSSLLLEVVSLFPPHSKT---PKLVLITDDKEISSSSSPPPRIPPADFVDTYE 170
+ LL+ + +SK P+++LI D P RI D ++ YE
Sbjct: 121 YLEKARKALELLMSTNFITAQNSKKISMPQVILIDD-------LYSPTRIQQQDQLE-YE 172
Query: 171 NMLAKGDPQFSWVRPKS----DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWV 226
++ +G+P+++ P++ + DP+VLNYT GTTS PKGVV ++ F+ +++++ W
Sbjct: 173 QLVHQGNPEYA---PENIVDDEWDPIVLNYTSGTTSEPKGVVYSHRGAFLSTLNTIMGWE 229
Query: 227 VPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPI 286
+ + V LW+LPMFH NGW+ TWG A G TNVC+R A +++ I H VTHMC AP
Sbjct: 230 MGTEPVYLWSLPMFHINGWTLTWGIAARGGTNVCIRNTTAQEIYSNITLHKVTHMCCAPT 289
Query: 287 VLN-LLSSSP-EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSC 344
V N LL + P E +++ PV+++ G+PPP ++ + E LGF V H YG TE G + C
Sbjct: 290 VFNILLEAKPHERREITTPVQVMVGGAPPPTTLIGKIEELGFHVVHCYGITEAGGTTLVC 349
Query: 345 AWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLM 404
W+ +WNKL ++A+LKARQG+ + L +VD+ + +T SV +G+T GEI +RG S+M
Sbjct: 350 EWQSEWNKLSREDQANLKARQGISVLALEDVDVKNSKTMQSVPHNGKTMGEICLRGSSIM 409
Query: 405 LGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLY 464
GY K+ +A S+ K+G ++TGDV ++H DGYLEIKDR KD+IISGGENISS E+E+ +
Sbjct: 410 KGYFKNDKANSQVFKNGWFFTGDVAVIHQDGYLEIKDRCKDIIISGGENISSIEVENAIL 469
Query: 465 SHPMVNEAAVVGRPDPFWQEIPCAFV 490
HP V EAAVV P P W E PCAFV
Sbjct: 470 KHPSVIEAAVVAMPHPRWGETPCAFV 495
>gi|332284207|ref|YP_004416118.1| AMP-dependent synthetase and ligase [Pusillimonas sp. T7-7]
gi|330428160|gb|AEC19494.1| AMP-dependent synthetase and ligase [Pusillimonas sp. T7-7]
Length = 553
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/560 (43%), Positives = 343/560 (61%), Gaps = 21/560 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYND----TTYTWSQTYRRCLQLASSLSSF 59
L PAN ++PL FIER+A ++++ WS+ YRRC QLAS+LS+
Sbjct: 9 LPQTPANYAAMSPLSFIERSAATYPQQLAVVHGTGPQALRRNWSELYRRCRQLASALSNS 68
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
GI G V+V+ PN P M E HF VPM+GA+ NTINTRLD + ++ +L H E+K+V VD
Sbjct: 69 GIGKGDTVAVMLPNTPPMVEAHFGVPMAGAVLNTINTRLDPKMVAFMLDHGEAKVVIVDP 128
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ + + +SL S P V+ D + S+SP DF YE+ +A GDP+
Sbjct: 129 EFAPTISKALSLRT--SSAPIKVIDAADSLYTGSNSPI-----GDF--EYEDFIAGGDPE 179
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F+W P ++ D + LNYT GTT PKGVV ++ A+ ++++W +PK +V LWTLPM
Sbjct: 180 FAWELPGNEWDAIALNYTSGTTGNPKGVVYHHRGAATAAISNILEWDMPKHAVYLWTLPM 239
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A NVCLR+ + +F IR+HGV H CGAPIV +L ++P++ +
Sbjct: 240 FHCNGWCFPWAVAARAGVNVCLRRVEPQAIFDAIREHGVDHYCGAPIVHGMLVNAPDSLK 299
Query: 300 LDRP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
P V+ + AG+ PPA ++ E +GF + H YG TE G CA W L E
Sbjct: 300 QGVPQGVKAMVAGAAPPASMIEGMERMGFNLLHVYGLTETYGPATVCAQHHNWGDLDIGE 359
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
RA L +RQGV + +++PET SV DG+T GEI+ RG M GYLK+P+AT +
Sbjct: 360 RARLNSRQGVTYHLERGIAVMNPETMQSVPADGETMGEIMFRGNITMKGYLKNPKATQEA 419
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
+ G +++GD+ +M PDGY++IKDRSKD+IISGGENISS E+E +LY HP V AAVV R
Sbjct: 420 LSGGWFHSGDLAVMDPDGYIKIKDRSKDIIISGGENISSIEVEDILYRHPDVLAAAVVAR 479
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
DP W E PCAF+ LK G + T + II++C+ + + VP+ VVF ELPKT+TG
Sbjct: 480 SDPRWGETPCAFIELKDGAQA-----TPESIIEHCKKHMASFKVPRKVVFC-ELPKTSTG 533
Query: 538 KVQKYVLGDIANSMSMSHSR 557
K+QK+ L A ++ + ++
Sbjct: 534 KIQKFELRKQAEALETAAAQ 553
>gi|374333073|ref|YP_005083257.1| acyl-CoA synthetase [Pseudovibrio sp. FO-BEG1]
gi|359345861|gb|AEV39235.1| acyl-CoA synthetase [Pseudovibrio sp. FO-BEG1]
Length = 548
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/546 (44%), Positives = 336/546 (61%), Gaps = 19/546 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+PL F+ERAA +II+ ++ + Y R ++LAS+LS GI VS
Sbjct: 20 ANYTPLSPLSFLERAAKVFPTHTAIIHGSIRRSYKEFYERSIRLASALSKRGIGKNDCVS 79
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
V+ N P M E H+ VPM+GA+ + +NTRLDA I+ L H+ESKLV VD S ++ E
Sbjct: 80 VMLTNTPPMLEAHYGVPMAGAVLHALNTRLDAAIIAFQLDHAESKLVIVDREFSKVMSEA 139
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
+ L + V++ DDKE P+ P YE ++A G F W PK +
Sbjct: 140 LEL----ATVKPTVVLYDDKEF-------PQSAPVIGELEYEELIASGSTDFQWQLPKDE 188
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + LNYT GTT PKGVV ++ +++A ++I + K+ V LWTLPMFH NGW F
Sbjct: 189 WDAITLNYTSGTTGNPKGVVYHHRGAYLLAQANIITAAMGKKPVYLWTLPMFHCNGWCFP 248
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQLDRPVRI 306
W ++V T+VCLR+ ++ + VTH+CGAPIV++ L ++PE ++L V
Sbjct: 249 WSLSLVAGTHVCLRQVRQGPIWNALADEKVTHLCGAPIVMSTLLNTPEDQKRKLTHEVEF 308
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
TA +PPP VL GF V+H YG TE+ G V W W++LP E+A+LKARQG
Sbjct: 309 FTAAAPPPEAVLAAMAEEGFNVTHLYGLTEVYGPAVVNEWHEHWDELPTSEQAALKARQG 368
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
V + L ++ ++DP+T V DG+T GE++ +G +M GYLK+P AT + G +++G
Sbjct: 369 VNYVALQDLAVLDPKTMQPVPADGETIGEVMFKGNVVMKGYLKNPSATQEAFAGGWFHSG 428
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+G+ H DGY+++KDRSKD+IISGGENISS EIE VLY HP ++ AAVV RPD W E P
Sbjct: 429 DLGVQHEDGYVQLKDRSKDIIISGGENISSIEIEEVLYKHPEISAAAVVARPDDKWGETP 488
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546
CAFV LK + TE DII YC+ + + P+TVVF D LPKT+TGK+QK+VL +
Sbjct: 489 CAFVELKENSS-----VTETDIITYCKEHLASFKSPRTVVFTD-LPKTSTGKIQKFVLRE 542
Query: 547 IANSMS 552
A +++
Sbjct: 543 QAKTLA 548
>gi|188583870|ref|YP_001927315.1| AMP-dependent synthetase and ligase [Methylobacterium populi BJ001]
gi|179347368|gb|ACB82780.1| AMP-dependent synthetase and ligase [Methylobacterium populi BJ001]
Length = 544
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 247/549 (44%), Positives = 341/549 (62%), Gaps = 18/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PLTPL +++RAA D ++I+ ++++ Y RC +LA L++ GI
Sbjct: 11 LDRNPANYQPLTPLTYLDRAARTFPDHVAVIHGPLRRSYAELYARCRRLAGVLAARGIGR 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ N PAM E H+ VPM+GA+ NT+NTRLDA ++ L H E+KL VD +
Sbjct: 71 GDTVAVLLANTPAMIECHYGVPMTGAVLNTLNTRLDAAALAFCLDHGEAKLFIVDREFAR 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ E + + LV+ DD E S P D YE+ LA GDP F W
Sbjct: 131 IGREALD----RAGVSPLVIAYDDPEFSGEGGPLGE------ADDYESFLAAGDPDFDWA 180
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++++ ++I +P+ +V LWTLPMFH N
Sbjct: 181 MPDDEWDAISLNYTSGTTGDPKGVVYHHRGAALLSLGNVITAGLPQHAVYLWTLPMFHCN 240
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW F W ++V T+VCLR+ AP ++A + +HGVTH+ GAPIV++ L ++PE ++ P
Sbjct: 241 GWCFPWTLSIVAGTHVCLRQVRAPAMYAALAEHGVTHLSGAPIVMSTLLNAPEDQKRPLP 300
Query: 304 VRI--LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R+ LTA +PPP VL GF V+H YG TE G V AW +W+ L ERA
Sbjct: 301 HRVHFLTAAAPPPEAVLAAMGEAGFNVTHLYGLTETYGPAVVNAWHEEWDALAPDERAKK 360
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L +D+ DPET S+ DG + GE++ RG +M GYLK+P +T K G
Sbjct: 361 KARQGVRYPVLEGLDVRDPETMESLPADGTSLGEVMFRGNVVMRGYLKNPASTQAAFKGG 420
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GD+G+ HPDGY+++KDRSKD+IISGGENISS E+E L+ HP V AAVV +PD
Sbjct: 421 WFRSGDLGVKHPDGYIQLKDRSKDIIISGGENISSIEVEDALFKHPSVAAAAVVAKPDAK 480
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK G ++ T ++++ +CR R+ Y +P+ VVF ELPKT+TGKVQK
Sbjct: 481 WGETPCAFVELKEGREA-----TSEELVAWCRERLAPYKLPRHVVF-GELPKTSTGKVQK 534
Query: 542 YVLGDIANS 550
+VL + A
Sbjct: 535 FVLREKARE 543
>gi|339328023|ref|YP_004687715.1| medium-chain-fatty-acid--CoA ligase AlkK [Cupriavidus necator N-1]
gi|338170624|gb|AEI81677.1| medium-chain-fatty-acid--CoA ligase AlkK [Cupriavidus necator N-1]
Length = 562
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 247/550 (44%), Positives = 331/550 (60%), Gaps = 19/550 (3%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
RL+ N AN PLTPL F++R A + +I++ +W T RC +LAS+L G+
Sbjct: 9 RLERNAANHVPLTPLQFLDRCAEQYPERTAIVHGGLRQSWRTTRDRCRRLASALVKRGVR 68
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G VS++APN PAM E H VP+SGA+ N IN RLDA + IL H E++++ VD +
Sbjct: 69 GGDTVSILAPNTPAMVEAHHGVPLSGAVLNAINCRLDAEGVRFILAHGEARILLVDSEFA 128
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
+L + P LV+ D E + + R+ D YE +L++GD F
Sbjct: 129 ALAATALQGL----DNPPLVVDILDTEGPTGT----RLGALD----YEQLLSEGDVDFGG 176
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
+ P + D + LNYT GTTS PKGVV ++ +++++ L DW +P+ LWTLPMFH
Sbjct: 177 IWPDDEWDAIALNYTSGTTSDPKGVVPSHRGAYLMSMLQLTDWGMPRAPRYLWTLPMFHA 236
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--L 300
NGW F W T+VCLRK A +F I H V H C APIVL L+++ E+++
Sbjct: 237 NGWCFAWAITAAAGTHVCLRKVTAENIFHAIDAHKVNHFCAAPIVLASLATASESERRLF 296
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
VR+ TAGSPPPA VL +GF V H YG TE +G VS P W+ P E+A
Sbjct: 297 SHAVRVRTAGSPPPASVLKAVMEMGFDVEHVYGITEASGTPVSSYRDPAWDDKPIEEKAR 356
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
L +RQG R L + + DP+T V DG+T+GE+++RG +M GYLK+P+AT
Sbjct: 357 LMSRQGNRAAALEGLRVADPDTMEPVPCDGKTQGELLLRGNIVMKGYLKNPQATVAAFSG 416
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGDV +MHPDGY++I DRSKDVIISGGENISS E+E VL+ HP V AAVV +P P
Sbjct: 417 GWFHTGDVAVMHPDGYIQITDRSKDVIISGGENISSVEVEDVLHRHPAVLIAAVVAQPHP 476
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E PCAF+ LK G D+ TEK+II +CR R+ Y P VV+ LPKT TGK+Q
Sbjct: 477 KWGESPCAFIELKPGVDA----PTEKEIIDFCRDRLAHYKCPVRVVY-GPLPKTGTGKIQ 531
Query: 541 KYVLGDIANS 550
KY L ++A S
Sbjct: 532 KYRLRELAKS 541
>gi|134294093|ref|YP_001117829.1| AMP-dependent synthetase/ligase [Burkholderia vietnamiensis G4]
gi|134137250|gb|ABO58364.1| AMP-dependent synthetase and ligase [Burkholderia vietnamiensis G4]
Length = 567
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 248/553 (44%), Positives = 341/553 (61%), Gaps = 25/553 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ +PAN L+PL F+ERAA+ + +I++ W++TYRRC LA +L GI
Sbjct: 35 LERDPANFIALSPLTFLERAASVWPERTAIVHGTIRRDWAETYRRCRLLAGALRGRGIGN 94
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V++IA N P ++E HF VP+ GA+ NTINTRLDA TI+ IL H ++KL+ D SS
Sbjct: 95 GDTVAMIAANTPELFEAHFGVPLCGAVLNTINTRLDADTIAFILGHGDAKLLITDREFSS 154
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFV--DTYENMLAKG-DPQF 180
+ + ++ + +++ I D P+ D + YE +L + +F
Sbjct: 155 TVKKALARL---GRAIQVIDIDD-----------PQFGEGDLLGEKDYEALLQEAAHTEF 200
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
S P + + LNYT GTT PKGVV ++ ++ AV + + W + + + LWTLPMF
Sbjct: 201 SVAMPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNAVSNALSWHLDEDTTYLWTLPMF 260
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLS-SSPEAKQ 299
H NGW F W A+V T+V LR A + A IR VTH C A +VLN+++ ++PE K
Sbjct: 261 HCNGWCFPWTMALVAGTSVFLRHTRAERILAAIRTEAVTHFCAASVVLNMINNAAPELKA 320
Query: 300 -LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
+ V+++T G+PPPA V+ E +G+ V+H YG TE G V C W+ WN L +
Sbjct: 321 GISHGVKVMTGGAPPPASVIAGMERMGWDVTHAYGLTESYGPVVQCVWRDSWNALDLDAK 380
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A LKARQGVR L V + P+T V +DGQT GE+ +RG ++M GYLK+P+AT +
Sbjct: 381 ARLKARQGVRGPALEAVMVASPDTLEPVPKDGQTLGEVFLRGNNVMKGYLKNPDATVEAF 440
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
G ++TGD+ + HPDGYLEIKDRSKD+IISGGENISS EIE +LYSHP V EAA+V RP
Sbjct: 441 SGGWFHTGDLAVWHPDGYLEIKDRSKDIIISGGENISSIEIEDILYSHPAVLEAAIVARP 500
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
D W E PCAF++LK DS TE DII +CR R+ + VPKT+VF LPKTATGK
Sbjct: 501 DDKWGETPCAFIALK--ADSA---VTEADIIAFCRERLAHFKVPKTIVF-SPLPKTATGK 554
Query: 539 VQKYVLGDIANSM 551
+QK+ L + A +
Sbjct: 555 IQKFHLRERARQL 567
>gi|83311730|ref|YP_421994.1| Acyl-CoA synthetase/AMP-acid ligase II [Magnetospirillum magneticum
AMB-1]
gi|82946571|dbj|BAE51435.1| Acyl-CoA synthetase/AMP-acid ligase II [Magnetospirillum magneticum
AMB-1]
Length = 541
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/552 (43%), Positives = 339/552 (61%), Gaps = 24/552 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN LTPL F+ERAA D ++I+ TW++T+ RC +LA++L++ GI
Sbjct: 10 LDRNAANFVALTPLTFLERAAAVWPDRLAVIHGPVRRTWAETFVRCRKLAAALTARGIGL 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+++ N P +E HF VP++GA+ N INTRLDA I+ IL H+E+K++ D S
Sbjct: 70 GDTVALMGANTPETFEAHFGVPLTGAVLNAINTRLDADAITFILNHAEAKILITDREFSP 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFV--DTYENMLAKGDPQFS 181
++ + ++ +T ++ I D P+ + + YE +L + +
Sbjct: 130 VVKKALAAL---GRTIPVIDIDD-----------PQFKGGELLGEKNYEQLLDEAASEAP 175
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + + LNYT GTT PKGVV ++ + AV + + W + +V LWTLPMFH
Sbjct: 176 WTLPTDEWQAIALNYTSGTTGNPKGVVYHHRGAHLNAVSNALSWQMGDNTVYLWTLPMFH 235
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQ 299
NGW F W AVV T+VCLR + IR VT+ CGAPIVLN+++++P A +
Sbjct: 236 CNGWCFPWTMAVVAGTSVCLRHVRVDAIMGAIRDEKVTNFCGAPIVLNMINNAPAALKEG 295
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+ V+++TAG+ PPAPV+ E +G+ V+H YG TE G V C W KWN L E+A
Sbjct: 296 ISHAVKVMTAGAAPPAPVIAGMERMGWEVTHVYGLTECYGPTVQCVWHDKWNGLSIDEKA 355
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+KARQGVR L + I DP + +DG+T GEI MRG ++M GYLK+ +AT +
Sbjct: 356 QIKARQGVRGPMLEGLMIADPISLEPAPKDGKTVGEIFMRGNNVMKGYLKNEKATEEAFA 415
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+ + HPDGY+EIKDRSKD+IISGGENISS E+E +LY+H V EAAVV RPD
Sbjct: 416 GGWFHTGDLAVCHPDGYIEIKDRSKDIIISGGENISSIEVEDILYAHLAVLEAAVVARPD 475
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E PCAF++LK G ++ TE DII +CR R+ + VP+T+VF LPKT+TGKV
Sbjct: 476 EKWGETPCAFIALKDGAEA-----TEADIITFCRERMAHFKVPRTIVF-GGLPKTSTGKV 529
Query: 540 QKYVLGDIANSM 551
QK++L A +
Sbjct: 530 QKFMLRQKAKEL 541
>gi|406677187|ref|ZP_11084372.1| hypothetical protein HMPREF1170_02580 [Aeromonas veronii AMC35]
gi|404625501|gb|EKB22318.1| hypothetical protein HMPREF1170_02580 [Aeromonas veronii AMC35]
Length = 540
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/543 (44%), Positives = 338/543 (62%), Gaps = 20/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN LTP+ F+ RA D P++I+ +W +T RRC Q AS+L GI
Sbjct: 11 LAKTAANFEALTPISFLGRAERVYPDYPALIHGSLRQSWGETARRCRQFASALRLRGIGE 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS++APNIPAM+E HF VPMSGA+ NTINTRLDA +++ I +H++SK+V VD
Sbjct: 71 GDTVSIVAPNIPAMFEAHFGVPMSGAVLNTINTRLDAESMAFIFQHAQSKVVLVDREFGL 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + L + LV+ DD + I D YE LA+G
Sbjct: 131 VVRKALELL----EHQPLVIAIDDPLYREGA----LISDLD----YEQFLAQGSGDEPGW 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + LNYT GTT PKGVV ++ + A+++++ W +PK V LWTLPMFH N
Sbjct: 179 LPEDEWQAISLNYTSGTTGNPKGVVYHHRGAHLNAINNVLSWELPKHPVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW F W AV +VCLR A ++ + +H V+H C APIVLN+L+++ A + LD
Sbjct: 239 GWCFPWTLAVTAGVSVCLRHVQATAIYGALHEHKVSHFCAAPIVLNMLNNADPALKRGLD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
P++++TAG+ PPA V+ E++G V+H YG TE G V C + W A + L
Sbjct: 299 HPIKVMTAGAAPPATVIAGMEAMGIAVTHVYGLTETYGPCVLCEPQRSWQGQDATALSRL 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGV + E+ +V P +G V +DG+T GEIV+RG +M GYLK+P A+++ M +G
Sbjct: 359 KARQGVASPLQGEMRVVHPVSGEPVAKDGKTMGEIVLRGNVVMKGYLKNPAASAEAMAEG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GD+ + HPDGY+EIKDRSKD+IISGGENISS E+E VLY HP V+EAAV+ PD
Sbjct: 419 WFRSGDLAVWHPDGYVEIKDRSKDIIISGGENISSLEVEDVLYRHPDVDEAAVIAMPDEK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK G + TT+ ++I +CR ++ + PK ++F LPKT+TGKVQK
Sbjct: 479 WGEVPCAFVKLKEGRE-----TTQAELIAFCREQMAHFKAPKRIIFTP-LPKTSTGKVQK 532
Query: 542 YVL 544
+VL
Sbjct: 533 FVL 535
>gi|163796330|ref|ZP_02190291.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [alpha
proteobacterium BAL199]
gi|159178472|gb|EDP63014.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [alpha
proteobacterium BAL199]
Length = 539
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/550 (44%), Positives = 337/550 (61%), Gaps = 22/550 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L +PAN PLTPL F++R A ++++ YTW+Q RC +L S+L+ GI
Sbjct: 8 LDKSPANYVPLTPLSFLDRTAAVFPSRLAVVHGKRRYTWAQAAERCRRLGSALTKRGIGK 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PN P +E VPM+GA+ N +NTRLDA ++ +L H E+ ++ D +
Sbjct: 68 GDTVAAMLPNTPEAFEAAHGVPMTGAVLNMLNTRLDAEALAFMLDHGEASILLTDTEFAP 127
Query: 124 LLLEVVSLFPPHSKTPKLVLI-TDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
+ ++ T KL +I DD E R+ D YE+ LA GDP +
Sbjct: 128 TIEAALA-----RTTRKLTVIDVDDSEGPGGK----RLGETD----YESFLASGDPDYRG 174
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
VRP + D + LNYT GTT PKGVV ++ ++ A+ +++ W + V LWTLPMFH
Sbjct: 175 VRPADEWDAIALNYTSGTTGDPKGVVYHHRGAYLNALGNVLVWGMKMHPVYLWTLPMFHC 234
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
NGW F W T+VCLRK +A ++ GVTH+CGAPIV+++L ++P+ + +
Sbjct: 235 NGWCFPWTITAQAGTHVCLRKVEAKAIYDTFADEGVTHLCGAPIVMSMLLNAPDEARREF 294
Query: 303 P--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
P V+++TA S PPA VL E LG V+H YG TE+ G V CAW +W+ P E+A
Sbjct: 295 PQKVQMMTAASAPPAAVLEGMERLGIEVTHVYGLTEVYGPAVVCAWHEEWSGRPIEEQAD 354
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
LK+RQGVR L + + +P+T V D T GE+ MRG +M GYLK+P AT K KD
Sbjct: 355 LKSRQGVRYPVLEGLMVANPDTMEPVPADATTMGEVFMRGNIVMKGYLKNPNATDKAFKD 414
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +++GD+G++HPDGY+E+KDRSKD+IISGGENIS+ E+E VLY HP + EAAVV +PD
Sbjct: 415 GWFHSGDLGVVHPDGYVELKDRSKDIIISGGENISTIEVEGVLYRHPAILEAAVVAKPDE 474
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E PCAFV+L+ G TT +++I +CR + + PKTVVF ELPKT+TGKVQ
Sbjct: 475 KWGETPCAFVTLRPGK-----TTTPEEVIAFCRQHLASFKCPKTVVF-GELPKTSTGKVQ 528
Query: 541 KYVLGDIANS 550
K+VL + A
Sbjct: 529 KFVLRERAKG 538
>gi|377811496|ref|YP_005043936.1| AMP-dependent synthetase and ligase [Burkholderia sp. YI23]
gi|357940857|gb|AET94413.1| AMP-dependent synthetase and ligase [Burkholderia sp. YI23]
Length = 547
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 247/553 (44%), Positives = 337/553 (60%), Gaps = 19/553 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L AN LTPL FIERAA+ P+I++ + W++TY R +LAS+L++ GI
Sbjct: 8 DGLPKTAANFAALTPLNFIERAASVYPARPAIVHGEVRRNWAETYARTRRLASALAARGI 67
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
G V+ + PN P M E HF VPM+GA+ N +NTRLDA T++ +L H E+K V VD
Sbjct: 68 GVGDTVAAMLPNTPEMVEAHFGVPMTGAVLNALNTRLDAGTLTYMLTHGEAKAVLVDREF 127
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
S + ++ P LV+ DD + + + RI D YE +LA GDP +
Sbjct: 128 SETMRRALADVPQKV----LVIDVDDPQYAGAGE---RIGEID----YEALLASGDPAYE 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + + + LNYT GTT PKGVV ++ + A+ ++++W +P +V LWTLPMFH
Sbjct: 177 WSPPSDEWNAICLNYTSGTTGNPKGVVYHHRGAYTNAISNILEWDMPTHAVYLWTLPMFH 236
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A NVCLRK +A TVF LIR+ GVTH CGAPIV NLL ++P+ +
Sbjct: 237 CNGWCFPWTVAARAGVNVCLRKIEAKTVFDLIREEGVTHYCGAPIVQNLLINAPDELKAG 296
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+ + V + AG+PPPA ++ E +GF ++H YG TE+ G CA + +W+ L ERA
Sbjct: 297 ITQKVYAMVAGAPPPATMIEGMERMGFQLTHVYGLTEVYGPATVCAHQDEWSALDVHERA 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L ARQGVR V + DP T V DG+T GEI+ RG M GYLK+ AT +
Sbjct: 357 RLNARQGVRYHLQDAVTVRDPATMERVPSDGETIGEIMFRGNIAMKGYLKNTAATEDAFR 416
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+ + +PDGY+ IKDRSKD+IISGGENISS E+E LY HP V AVV +PD
Sbjct: 417 GGWFHTGDLAVAYPDGYVRIKDRSKDIIISGGENISSIEVEDALYRHPAVLAVAVVAKPD 476
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E PCAFV LK G + T +++I +C+ + + VP+ + F ELPKT+TGK+
Sbjct: 477 ARWGETPCAFVELKPGAHA-----TAEELIAHCKTELAGFKVPRAIEF-RELPKTSTGKI 530
Query: 540 QKYVLGDIANSMS 552
QK+ L IA S++
Sbjct: 531 QKFELRKIAGSVA 543
>gi|428164588|gb|EKX33608.1| hypothetical protein GUITHDRAFT_90688 [Guillardia theta CCMP2712]
Length = 540
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/560 (44%), Positives = 343/560 (61%), Gaps = 29/560 (5%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M + N AN PLTPL F+ R S+I+ T+TW +T RC +LAS+L G
Sbjct: 1 MWEIPKNKANYVPLTPLSFLRRVERVYPSYESVIHGSKTFTWKETAERCRRLASALRRRG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ PG VSVIA N P M E HF VPM+GA+ N INTRLD I+ IL HSE+ + D
Sbjct: 61 VEPGDTVSVIATNTPEMKECHFGVPMTGAVLNCINTRLDPAAIAFILDHSETSFLITD-- 118
Query: 121 SSSLLLEVVSLFPPHSKTP------KLVLITDDKEISSSSSPPPRIPPADFVDT-YENML 173
+ F P+ K K+ +I +I S +P +P DT YE +L
Sbjct: 119 ---------TEFAPNVKAALEMIKRKISVI----DICDSEAPNFNVPANRLSDTDYEKLL 165
Query: 174 AKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVL 233
+G P + P + D + L YT GTT PKGVV ++ ++ ++ ++I W + S
Sbjct: 166 TEGSPDGNIDGPLDEWDAIALGYTSGTTGDPKGVVTHHRGAYLNSLSNIIVWDMGHHSRY 225
Query: 234 LWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLS 292
LWTLPMFH NGW F W A VG T+VCLRK A ++ I HGV +CGAPIVLN +++
Sbjct: 226 LWTLPMFHCNGWCFPWTLAAVGGTSVCLRKVTAENIYNSIADHGVDRLCGAPIVLNTIIN 285
Query: 293 SSPEAKQ-LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWN 351
+ PE+++ V+++TA +PPP L R + GF V+H YG TE G V C+WK +W+
Sbjct: 286 APPESRRSFKHQVKVMTAAAPPPPSTLQRMQQQGFEVTHVYGLTETYGPAVICSWKGEWD 345
Query: 352 KLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDP 411
LP ++A +++RQGV L +++++DPET V DGQT GE++ RG +M GYLK+P
Sbjct: 346 ALPLEQQAKMRSRQGVNYHVLEDLEVLDPETLQPVPADGQTLGEVMFRGNVVMKGYLKNP 405
Query: 412 EATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNE 471
TSK ++ G +++GD+ +MH DGY+E+KDRSKDVIISGGENISS E+E ++ SHP V
Sbjct: 406 ATTSKDLRGGWFHSGDLAVMHSDGYIELKDRSKDVIISGGENISSIEVEGIMTSHPAVEM 465
Query: 472 AAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDEL 531
AVV RPD W E PCAFV LK G D+ + E+D+ +CR + + VPKT VF EL
Sbjct: 466 VAVVARPDEKWGETPCAFVELKKGYDA----SVEEDLKNFCREHMAHFKVPKTFVF-QEL 520
Query: 532 PKTATGKVQKYVLGDIANSM 551
PKT+TGK+QK+ L ++A ++
Sbjct: 521 PKTSTGKLQKFKLRELAKNL 540
>gi|107027251|ref|YP_624762.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia AU
1054]
gi|116691355|ref|YP_836888.1| AMP-dependent synthetase/ligase [Burkholderia cenocepacia HI2424]
gi|105896625|gb|ABF79789.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia AU
1054]
gi|116649355|gb|ABK09995.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
HI2424]
Length = 545
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 247/553 (44%), Positives = 341/553 (61%), Gaps = 25/553 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ +PAN L+PL F+ERAA+ + +I++ W++TYRRC LA +L GI
Sbjct: 13 LERDPANFIALSPLTFLERAASVWPERTAIVHGTIRRDWAETYRRCRMLAGALRGRGIGN 72
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V++IA N P ++E HF VP+ GA+ NTINTRLDA TI+ IL H ++KL+ D SS
Sbjct: 73 GDTVAMIAANTPELFEAHFGVPLCGAVLNTINTRLDADTIAFILGHGDAKLLITDREFSS 132
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFV--DTYENMLAKG-DPQF 180
+ + ++ + +++ I D P+ D + YE +L + +F
Sbjct: 133 TVKKALARL---GRAIQVIDIDD-----------PQFGEGDLLGEKDYEALLQEAAHTEF 178
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
S P+ + + LNYT GTT PKGVV ++ ++ AV + + W + + + LWTLPMF
Sbjct: 179 SVAMPEDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNAVSNALSWHLDEDTTYLWTLPMF 238
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLS-SSPEAKQ 299
H NGW F W A+V T+V LR A + A IR VTH C A +VLN+++ ++PE K
Sbjct: 239 HCNGWCFPWTMALVAGTSVFLRHTRAERILAAIRTEAVTHFCAASVVLNMINNAAPELKA 298
Query: 300 -LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
+ V+++T G+PPPA V+ E +G+ V+H YG TE G V C W+ WN L +
Sbjct: 299 GIRHGVKVMTGGAPPPASVIAGMERMGWDVTHAYGLTESYGPVVQCVWRDSWNALDLDAK 358
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A LKARQGVR L V + P+T V +DGQT GE+ +RG ++M GYLK+ +AT +
Sbjct: 359 ARLKARQGVRGPALEAVMVASPDTLEPVPKDGQTLGEVFLRGNNVMKGYLKNSDATVEAF 418
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
G ++TGD+ + HPDGYLEIKDRSKD+IISGGENISS EIE +LYSHP V EAA+V RP
Sbjct: 419 SGGWFHTGDLAVWHPDGYLEIKDRSKDIIISGGENISSIEIEDILYSHPAVLEAAIVARP 478
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
D W E PCAF++LK DS TE DII +CR R+ + VPKT+VF LPKTATGK
Sbjct: 479 DDKWGETPCAFIALK--DDSA---VTEADIIAFCRERLAHFKVPKTIVF-SPLPKTATGK 532
Query: 539 VQKYVLGDIANSM 551
+QK+ L + A +
Sbjct: 533 IQKFHLRERARQL 545
>gi|405345688|ref|ZP_11022481.1| Long-chain-fatty-acid--CoA ligase [Chondromyces apiculatus DSM 436]
gi|397093737|gb|EJJ24434.1| Long-chain-fatty-acid--CoA ligase [Myxococcus sp. (contaminant ex
DSM 436)]
Length = 544
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/549 (44%), Positives = 337/549 (61%), Gaps = 21/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ N AN LTP+ F+ RAAT + +II+ TW +TY RC +LAS+L GI
Sbjct: 9 LEKNDANFVQLTPMTFLARAATVHPERVAIIHGALRQTWRETYARCRRLASALRKRGIGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PN+PA+ E HF VPMSGA+ N +NTR DA++I+ +L H E+K + VD ++
Sbjct: 69 GDTVAALMPNVPALIEAHFGVPMSGAVLNALNTRFDAQSIAFMLAHGEAKALLVDRELAA 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ V + + +L+ D +P +PPA + YE +LA+GDP F +
Sbjct: 129 VASAAVD------RLGRDILVID------VDAPELDLPPAPGLG-YETLLAEGDPAFVYA 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ F+ A ++++W +PK V LWTLP+FH N
Sbjct: 176 GPDDEWDAICLNYTSGTTGDPKGVVYHHRGAFLNATSNILEWDLPKHPVYLWTLPLFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLD 301
GW F W A TNVCLRK DAPT F LIR+H VTH CGAPIV ++L +++ + +
Sbjct: 236 GWCFAWTVAARAGTNVCLRKVDAPTCFDLIREHRVTHYCGAPIVHSMLIAAAAAHGQGVS 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V + AG+ PPA ++ E LG ++H YG TE+ G C W+ LP ERA L
Sbjct: 296 HRVSGMVAGAAPPAAMIEAMEQLGIDLTHVYGLTEVYGPAAVCEKHESWDALPISERARL 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQG R + ++DP T V DG+T GE++ RG M GYLK+P AT G
Sbjct: 356 NARQGARYHLQEAITVLDPATMQPVPADGETMGEVMFRGNITMKGYLKNPTATRAAFSGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++ PDGY++IKDRSKD+IISGGENISS E+E VLY HP V AAVV +PDP
Sbjct: 416 WFHTGDLGVLSPDGYVKIKDRSKDIIISGGENISSIEVEDVLYRHPAVVGAAVVAQPDPK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF+ L+ G + T +DII +C+ R+ + VP+ VVF LP+T+TGK+QK
Sbjct: 476 WGETPCAFIELRPGAQA-----TAEDIIAFCKERLSGFKVPRAVVF-GPLPRTSTGKIQK 529
Query: 542 YVLGDIANS 550
+ L A S
Sbjct: 530 FELRARAGS 538
>gi|406707605|ref|YP_006757957.1| AMP-binding protein [alpha proteobacterium HIMB59]
gi|406653381|gb|AFS48780.1| AMP-binding enzyme [alpha proteobacterium HIMB59]
Length = 541
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 237/547 (43%), Positives = 344/547 (62%), Gaps = 26/547 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
++ N AN PLTPL F++R D ++IY YTW Q Y RC + AS+L+ G+
Sbjct: 8 MQKNNANFVPLTPLSFLDRIKDVYPDYEALIYGSRKYTWKQVYERCTRFASALTKIGVGE 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH---- 119
G VVSV+A N P ++E+H++VPM+G + NTINTRLD RT++ IL HS+ K+ VD
Sbjct: 68 GDVVSVMAANTPELFEVHYSVPMTGGVVNTINTRLDVRTVAYILNHSDCKVFIVDRQFQP 127
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+++ LL+V + V++ D + + P I + YE+ L GD
Sbjct: 128 VAAEALLQV----------ERDVVVIDIDDQQAGLGDIPAIGDLE----YESFLQTGDEG 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F WVRPK + + LNYT GTT PKGVV ++ +++++ S+ W +P + L+T+PM
Sbjct: 174 FEWVRPKDEWQAISLNYTSGTTGNPKGVVYHHRGSYLMSMGSVSAWNMPNRLTYLYTVPM 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EA 297
FH NGW + W A++ A V +R +F LI ++ VTH GAPIVLN+++++P +
Sbjct: 234 FHCNGWGYPWTLAMLHARVVFIRNIIVKEIFELIDQYQVTHFGGAPIVLNMIANAPAEDQ 293
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
K L+ V ++TAG+PPP+ +LL+ ESLGF V H YG TE G V CAW WN LP +
Sbjct: 294 KALNNKVYVMTAGAPPPSSILLKMESLGFEVMHVYGLTETYGHVVHCAWNEDWNDLPEEQ 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
R+ K+ QGVR V ++DP+T V DG T GEI++RG ++M GY K+ +AT +
Sbjct: 354 RSDRKSYQGVRYPHTEVVAVMDPDTLKPVPADGSTMGEIMIRGNTVMKGYYKNEDATKEV 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
MKDG +++GD+ ++HP+GY+++KDRSKD+IISGGENISS EIE+++ HP V+ AAVV R
Sbjct: 414 MKDGWFHSGDLAVIHPNGYIQVKDRSKDIIISGGENISSVEIENIVTKHPAVSLAAVVAR 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD W E PCAF+ L G E+++ ++CR + + +PKT VF LPKT+TG
Sbjct: 474 PDEKWGETPCAFIELVEGQ-----QVEEEELKKFCREHLAGFKMPKTFVF-QTLPKTSTG 527
Query: 538 KVQKYVL 544
K+QK+ L
Sbjct: 528 KIQKFEL 534
>gi|50086068|ref|YP_047578.1| acyl-CoA synthetase [Acinetobacter sp. ADP1]
gi|49532044|emb|CAG69756.1| putative AMP-dependent synthetase/ligase [Acinetobacter sp. ADP1]
Length = 547
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 249/551 (45%), Positives = 343/551 (62%), Gaps = 18/551 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L PAN L+PL ++ERAA +II+ TW +TY RC Q AS L GI
Sbjct: 6 DELPRTPANFVALSPLRYLERAAYIYPQQAAIIHGTRVITWQETYTRCRQFASQLKQLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPMSGA+ NTINTRLDA+T++ +L+H+E+K++ VD
Sbjct: 66 QKNDTVSVLLPNVPAMIEAHFAVPMSGAVLNTINTRLDAKTVAFMLEHAETKVLLVDQEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
S L +SL V+ DD E +PP YE+ +++GD F
Sbjct: 126 SELAKAALSLI----NQDIFVIDVDDAEYEKCFTPPIG------AIEYEDWISEGDEYFE 175
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W+ P + D + LNYT GTT PKGVV ++ +I A ++I + ++ LWTLP+FH
Sbjct: 176 WILPNDEWDAISLNYTSGTTGNPKGVVYHHRGAYINAASNIIACGMTPRAKYLWTLPLFH 235
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL- 300
NGW F W A G TN+CLRK D VF LI +H + + CGAPIVL++L ++P+ Q+
Sbjct: 236 CNGWCFAWTVAANGGTNICLRKVDPALVFKLIEQHKIDYFCGAPIVLSMLINAPKQHQIK 295
Query: 301 -DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+ V ++ AG+ PPA ++ LG V+H YG TE G + CA + W+ L +E+A
Sbjct: 296 FNHRVEVMVAGAAPPAAIIEGMRHLGVNVTHVYGLTETYGPSGLCAAQAGWSDLSIQEQA 355
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L ARQGV + ++DP+T V DGQT GEI+ RG +M GYLK+P+AT +
Sbjct: 356 QLHARQGVPYPLQDSMRVLDPKTMQPVPADGQTLGEIMFRGNIVMKGYLKNPKATEEAFA 415
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
DG +++GD+ + PDGY +I DR+KDVIISGGENISS E+E VLY HP V AAVV +PD
Sbjct: 416 DGWFHSGDLAVCQPDGYAKITDRAKDVIISGGENISSLEVEEVLYRHPAVLTAAVVAKPD 475
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
P WQE+PCAF+ LK G + +TTE ++I++C+ + R+ VPK +V I E+PKT+TGK+
Sbjct: 476 PQWQEVPCAFIELKAGVN----ITTE-ELIEHCKKDLARFKVPKDIV-ITEIPKTSTGKL 529
Query: 540 QKYVLGDIANS 550
QK++L D A
Sbjct: 530 QKFILRDWAKE 540
>gi|254501248|ref|ZP_05113399.1| AMP-binding enzyme, putative [Labrenzia alexandrii DFL-11]
gi|222437319|gb|EEE43998.1| AMP-binding enzyme, putative [Labrenzia alexandrii DFL-11]
Length = 543
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 237/549 (43%), Positives = 337/549 (61%), Gaps = 18/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN L+PL F+ RAA D +II+ + Y+R QLAS+LS GI
Sbjct: 12 LDKTDANYAALSPLSFLARAADVFPDHTAIIHGKQRTDYRTFYKRSKQLASALSRHGIGK 71
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
VSV+ PN+P M E H+ VPM+ A+ +++NTRLDA I+ L H+ K++ D +S
Sbjct: 72 EDTVSVMLPNVPPMLEAHYGVPMTKAVLHSLNTRLDAAIIAFQLDHANCKVLITDREYAS 131
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ E + L + V+ D E S + YE+ L GD +F+W
Sbjct: 132 VMKEALEL----ATVKPTVIDYSDPEFPQDSEQLGSL-------DYEDFLQSGDTEFTWS 180
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ +++A ++I + K V LWTLPMFH N
Sbjct: 181 LPDDEWDAITLNYTSGTTGNPKGVVYHHRGAYLLAQANVITASMAKHPVYLWTLPMFHCN 240
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAKQLDR 302
GW F W ++V T+VCLR ++ LI GVTH+CGAPI+++ LL++ + + LDR
Sbjct: 241 GWCFPWSLSIVAGTHVCLRWVRPKAMWDLIADEGVTHLCGAPIIMSTLLNAGDDKRDLDR 300
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
V TA +PPP VL ++ GF V+H YG TE+ G V WK +W+ LP ++A K
Sbjct: 301 EVEFFTAAAPPPESVLAAMKTAGFNVTHLYGLTEVYGPAVVNDWKGEWDSLPLEQQAQKK 360
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
ARQGVR + L ++ +++PET V DGQT GE++ RG +M GYLK+ +AT + K G
Sbjct: 361 ARQGVRYVALEDLKVLNPETMEPVPADGQTIGEVMFRGNVVMKGYLKNQDATDEAFKGGW 420
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
+++GD+G+MHPDGY+++KDRSKD+IISGGENISS E+E VLY HP V AAVV RPD W
Sbjct: 421 FHSGDLGVMHPDGYIQLKDRSKDIIISGGENISSIEVEDVLYKHPDVQAAAVVARPDEKW 480
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E PCAFV LK+G+D TTE +++ +C+ + + P+ +VF D LPKT+TGK+QK+
Sbjct: 481 GETPCAFVELKSGSD-----TTENELMAFCKEHLASFKSPRKIVFCD-LPKTSTGKIQKF 534
Query: 543 VLGDIANSM 551
L + A ++
Sbjct: 535 ALREQAKAL 543
>gi|254455838|ref|ZP_05069267.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Candidatus
Pelagibacter sp. HTCC7211]
gi|207082840|gb|EDZ60266.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Candidatus
Pelagibacter sp. HTCC7211]
Length = 538
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/547 (42%), Positives = 337/547 (61%), Gaps = 24/547 (4%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L N AN PLTPL F+ERA + +I+Y D +YTWS+ +R + AS+L GI
Sbjct: 7 NLDKNSANYVPLTPLTFLERAKDVYPNYEAIVYEDRSYTWSEVCKRATKFASALEKIGIK 66
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD---H 119
G VS +A N P ++E H++VPM+G + NTIN RLDA TI+ IL+HSE+K++ VD H
Sbjct: 67 KGDTVSFLAFNTPEIFEAHYSVPMTGGVLNTINIRLDANTIAYILEHSEAKVLVVDRQLH 126
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ L+++ K +++ D + + S +I + YE+ L GD
Sbjct: 127 VEVKKALKILD---------KKIIVIDINDKHADQSKLEKIGDLE----YESFLNTGDEN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
+ + P + + L+YT GTT PKGVV ++ ++++ S + W +P + L +PM
Sbjct: 174 YLYKMPDDEWQAISLSYTSGTTGNPKGVVYHHRGSYLMSTGSAVAWNMPNRLNFLTIVPM 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA-- 297
FH NGW + W A++ +CLR D +F LI K+ VTH GAPIVLN+++ +PE+
Sbjct: 234 FHCNGWCYPWTIAMLNGRTICLRNIDVKKIFELIDKYNVTHFGGAPIVLNMITGAPESDR 293
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
K+L + V +LTAG+PPP+ + + + LGF V H YG TE G CAW +WN +
Sbjct: 294 KKLKQKVHVLTAGAPPPSIIFKKMKDLGFEVMHVYGLTETYGHVTQCAWNEEWNAYDEDK 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+ +KARQGVR V ++DPET V DG+T GEI++RG +M GY KD EAT K
Sbjct: 354 QNEIKARQGVRYPNTEGVTVMDPETMKEVPSDGKTIGEIMIRGNVVMKGYFKDKEATDKA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
M G +++GD+ +MHPDGY++I+DRSKD+IISGGENISS EIE+ L HP V+ AAVV +
Sbjct: 414 MAGGWFHSGDLAVMHPDGYVKIQDRSKDIIISGGENISSIEIENTLSKHPSVSIAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD W E+PCAF+ + T TTEK++I +C+ + + VPK V+F ELPKT+TG
Sbjct: 474 PDEKWGEVPCAFIEMVTDKP-----TTEKELIDFCKETLAGFKVPKQVIFC-ELPKTSTG 527
Query: 538 KVQKYVL 544
K+QK+ L
Sbjct: 528 KIQKFEL 534
>gi|387905774|ref|YP_006336112.1| 3-methylmercaptopropionyl-CoA ligase [Burkholderia sp. KJ006]
gi|387580666|gb|AFJ89381.1| 3-methylmercaptopropionyl-CoA ligase [Burkholderia sp. KJ006]
Length = 567
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 247/553 (44%), Positives = 341/553 (61%), Gaps = 25/553 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ +PAN L+PL F+ERAA+ + +I++ W++TYRRC LA +L GI
Sbjct: 35 LERDPANFIALSPLTFLERAASVWPERTAIVHGTIRRDWAETYRRCRLLAGALRGRGIGN 94
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V++IA N P ++E HF VP+ GA+ NTINTRLDA TI+ IL H ++KL+ D SS
Sbjct: 95 DDTVAMIAANTPELFEAHFGVPLCGAVLNTINTRLDADTIAFILGHGDAKLLITDREFSS 154
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFV--DTYENMLAKG-DPQF 180
+ + ++ + +++ I D P+ D + YE +L + +F
Sbjct: 155 TVKKALARL---GRAIQVIDIDD-----------PQFGEGDLLGEKDYEALLQEAAHTEF 200
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
S P+ + + LNYT GTT PKGVV ++ ++ AV + + W + + + LWTLPMF
Sbjct: 201 SVAMPEDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNAVSNALSWHLDEDTTYLWTLPMF 260
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLS-SSPEAKQ 299
H NGW F W A+V T+V LR A + A IR VTH C A +VLN+++ ++PE K
Sbjct: 261 HCNGWCFPWTMALVAGTSVFLRHTRAERILAAIRTEAVTHFCAASVVLNMINNAAPELKA 320
Query: 300 -LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
+ V+++T G+PPPA V+ E +G+ V+H YG TE G V C W+ WN L +
Sbjct: 321 GISHGVKVMTGGAPPPASVIAGMERMGWDVTHAYGLTESYGPVVQCVWRDSWNALDLDAK 380
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A LKARQGVR L V + P+T V +DGQT GE+ +RG ++M GYLK+P+AT +
Sbjct: 381 ARLKARQGVRGPALEAVMVASPDTLEPVPKDGQTLGEVFLRGNNVMKGYLKNPDATVEAF 440
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
G ++TGD+ + HPDGYLEIKDRSKD+IISGGENISS EIE +LYSHP V EAA+V RP
Sbjct: 441 SGGWFHTGDLAVWHPDGYLEIKDRSKDIIISGGENISSIEIEDILYSHPAVLEAAIVARP 500
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
D W E PCAF++LK DS TE DII +CR R+ + VPKT+VF LPKTATGK
Sbjct: 501 DDKWGETPCAFIALK--ADSA---VTEADIIAFCRERLAHFKVPKTIVF-SPLPKTATGK 554
Query: 539 VQKYVLGDIANSM 551
+QK+ L + A +
Sbjct: 555 IQKFHLRERARQL 567
>gi|395009043|ref|ZP_10392616.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acidovorax
sp. CF316]
gi|394312909|gb|EJE50012.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acidovorax
sp. CF316]
Length = 548
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 247/552 (44%), Positives = 337/552 (61%), Gaps = 17/552 (3%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L+ N AN PL+PL FIER A D +I++ TW QT+ RC QLASSL+ GI
Sbjct: 8 HLERNSANFAPLSPLSFIERTAEVYPDRLAIVHGSLRQTWGQTHARCRQLASSLNRAGIG 67
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
V+ + PN P M E HF VPM+GA+ N INTRLD TI+ +L H E++ + VD +
Sbjct: 68 KNDTVAALLPNTPPMVEAHFGVPMAGAVLNAINTRLDPETIAFMLDHGEARAIIVDPEFT 127
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
L + ++ S+ P LVL D P + D Y+ +A GD + +W
Sbjct: 128 GTLAKALAWR--KSQAPLLVLTVQDAVYG------PAVQDLGGTD-YDAFVAAGDAKHAW 178
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P + D + LNYT GTT PKGVV ++ A+ ++++W +PK +V LWTLPMFH
Sbjct: 179 ELPADEWDAIALNYTSGTTGNPKGVVYHHRGAATNAISNVLEWDMPKGAVYLWTLPMFHC 238
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
NGW F W A NVCLR+ +A +F +R+HGVTH CGAPIV +L ++P+A +
Sbjct: 239 NGWCFPWTVAARAGVNVCLRRVEAQAIFDAMREHGVTHYCGAPIVHGMLVNAPDAMKAGV 298
Query: 303 P--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
P ++ + AG+ PPA ++ E +GF ++H YG TE+ G CA W++L ERA
Sbjct: 299 PAGIKAMVAGAAPPASMIEGMEKMGFDLTHVYGLTEVYGPATVCAKHAAWDELDIGERAR 358
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
L ARQGVR +V ++DP T V +DG+T GEI+ +G +M GYLK+P+AT +
Sbjct: 359 LNARQGVRYHLERDVRVLDPATMQPVPQDGETMGEIMFKGNIVMKGYLKNPKATDEAFAG 418
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +++GD+ + +PDGY++IKDRSKD+IISGGENISS E+E VLY HP V AAVV RPDP
Sbjct: 419 GWFHSGDLAVQYPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPAVLAAAVVARPDP 478
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E PCAFV LK G T +DI+ +C+ + + VP+ VVF ELPKT+TGK+Q
Sbjct: 479 KWGETPCAFVELKAGA-----TLTPEDIVAHCKQHLAGFKVPRAVVF-GELPKTSTGKIQ 532
Query: 541 KYVLGDIANSMS 552
K+ L A S S
Sbjct: 533 KFELRKQAGSAS 544
>gi|118588371|ref|ZP_01545780.1| acyl-CoA synthase [Stappia aggregata IAM 12614]
gi|118439077|gb|EAV45709.1| acyl-CoA synthase [Stappia aggregata IAM 12614]
Length = 546
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/550 (44%), Positives = 345/550 (62%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PL+PL F+ RAA D +I++ + YRR QL S+L+ GI
Sbjct: 14 LDKNTANYAPLSPLSFLARAADVFPDTIAIVHGRQRTDYRTFYRRARQLGSALTRLGIGK 73
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
VSV+ N+P M E H+ VPM+GA+ +++NTRLDA I+ L H++ K++ D +
Sbjct: 74 NDTVSVMLSNVPPMLEAHYGVPMAGAVLHSMNTRLDAAIIAFQLDHADCKVLITDREYAP 133
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ E +S+ + TP ++ +D + R+ D YE L GDP+F+W
Sbjct: 134 VVKEALSM---AAVTPIVIDFSDTQFPQDGE----RLGSLD----YEAFLQSGDPEFAWS 182
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ +++A ++I + K V LWTLPMFH N
Sbjct: 183 LPDDEWDAIALNYTSGTTGNPKGVVYHHRGAYLLAQANVITASMAKHPVYLWTLPMFHCN 242
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAKQ-LD 301
GW F W ++V T+VCLR T++ LI + GVTH+CGAPI+++ LL+++PE K+ LD
Sbjct: 243 GWCFPWSLSLVAGTHVCLRWVRPQTMWELIAEEGVTHLCGAPIIMSTLLNAAPEHKRDLD 302
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R V TA +PPP VL ++ GF V+H YG TE+ G V WK +WN LP E+A
Sbjct: 303 REVEFFTAAAPPPESVLAAMKTAGFNVTHLYGLTEVYGPAVVNDWKLEWNDLPLDEQAQK 362
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR + L + ++DPET V DG+T GE++ RG +M GYLK+PEAT K K G
Sbjct: 363 KARQGVRYVALEGLTVLDPETLEPVPADGETLGEVMFRGNVVMKGYLKNPEATEKAFKGG 422
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G++HPDGY+++KDRSKD+IISGGENISS E+E VLY H V AAVV +PD
Sbjct: 423 WFHSGDLGVLHPDGYVQLKDRSKDIIISGGENISSIEVEEVLYKHADVQAAAVVAKPDEK 482
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK G+ +E D+I +CR + + PKT+VF ELPKT+TGK+QK
Sbjct: 483 WGETPCAFVELKEGS-----TVSEADLIAFCRQHLAGFKAPKTLVFC-ELPKTSTGKIQK 536
Query: 542 YVLGDIANSM 551
+ L + A ++
Sbjct: 537 FALREQAKAL 546
>gi|398820387|ref|ZP_10578914.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. YR681]
gi|398228957|gb|EJN15052.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. YR681]
Length = 549
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/543 (44%), Positives = 335/543 (61%), Gaps = 19/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PL+PL F+ R+A D S +Y ++TW+QTY RC + AS L+ GI
Sbjct: 12 LDKTPANYVPLSPLSFLARSAAVYPDHISTVYEGRSFTWAQTYARCRRFASYLAGEGIGV 71
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM E HFAVPM+GA+ N +N RLDA +I+ L H +K++ VD S
Sbjct: 72 GDTVAAMLPNIPAMNEAHFAVPMTGAVLNALNIRLDAPSIAFQLDHGGAKIILVDPEFSG 131
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + ++ S V+ DD RI + YE +A+GDP F +
Sbjct: 132 VITDALAQM---SGPKPFVIDVDDAAFKGGK----RIGEIE----YEAAVAQGDPNFVAI 180
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
PK + D + L+YT GTT PKGVV ++ ++ AV +++ + + V LWTLPMFH N
Sbjct: 181 PPKDEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGNLGQHPVYLWTLPMFHCN 240
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW F W A NVCLRK + +F LI+ HGVTHMCGAPIV N L ++P+A + +
Sbjct: 241 GWCFPWTIAAAAGINVCLRKVEPTKIFELIKLHGVTHMCGAPIVYNTLINAPDAPKGNAA 300
Query: 304 VRI--LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R+ L AG+ PP VL E +G ++H YG TE+ G CA +P W+ LPA ERA +
Sbjct: 301 RRVVGLIAGAAPPVAVLEGAEDIGIKLTHVYGLTEVYGPASVCAEQPGWDDLPAAERARM 360
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K RQGV V +++P+T V RDG+T GE++ RG +M GYLK+ +AT + + G
Sbjct: 361 KRRQGVPYPLEEGVTVINPQTMQEVPRDGETIGEVMFRGNIVMKGYLKNDKATKEAFEGG 420
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++ GY+ IKDRSKD+IISGGENISS E+E +LY HP V AAVV +PDP
Sbjct: 421 WFHTGDLGVLDEHGYVIIKDRSKDIIISGGENISSVEVEDILYKHPAVLFAAVVAKPDPK 480
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK G + TE +II +CR+ + + PK VVF +PKT+TGK+QK
Sbjct: 481 WGEVPCAFVELKDGASA-----TEAEIIGFCRSHMSGFKTPKAVVF-GPIPKTSTGKIQK 534
Query: 542 YVL 544
++L
Sbjct: 535 FLL 537
>gi|254473162|ref|ZP_05086560.1| acyl-CoA synthase [Pseudovibrio sp. JE062]
gi|211957883|gb|EEA93085.1| acyl-CoA synthase [Pseudovibrio sp. JE062]
Length = 548
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/546 (43%), Positives = 334/546 (61%), Gaps = 19/546 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+PL F+ERAA +II+ ++ + Y R ++LAS+LS GI VS
Sbjct: 20 ANYTPLSPLSFLERAAKVFPTHTAIIHGSIRRSYREFYERSIRLASALSQRGIGKNDCVS 79
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
V+ N P M E H+ VPM+GA+ + +NTRLDA I+ L H+ESKLV VD S ++ E
Sbjct: 80 VMLTNTPPMLEAHYGVPMAGAVLHALNTRLDAAIIAFQLDHAESKLVIVDREFSKVMSEA 139
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
+ L + V++ DDKE P+ P YE ++A G F W PK +
Sbjct: 140 LEL----ATVKPTVVLYDDKEF-------PQSAPVIGELEYEELIASGSTDFQWQLPKDE 188
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + LNYT GTT PKGVV ++ +++A ++I + K+ V LWTLPMFH NGW F
Sbjct: 189 WDAITLNYTSGTTGNPKGVVYHHRGAYLLAQANIITAAMGKKPVYLWTLPMFHCNGWCFP 248
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQLDRPVRI 306
W ++V T+VCLR+ ++ + VTH+CGAPIV++ L ++PE ++ V
Sbjct: 249 WSLSLVAGTHVCLRQVRQGPIWNALADEKVTHLCGAPIVMSTLLNTPEDQKRKFTHEVEF 308
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
TA +PPP VL GF V+H YG TE+ G V W W++LP E+ +LKARQG
Sbjct: 309 FTAAAPPPEAVLAAMAEEGFNVTHLYGLTEVYGPAVVNEWHEHWDELPTSEQVALKARQG 368
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
V + L ++ ++DP+T V DG+T GE++ +G +M GYLK+P AT + G +++G
Sbjct: 369 VNYVALQDLAVLDPKTMQPVPADGETIGEVMFKGNVVMKGYLKNPSATQEAFAGGWFHSG 428
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+G+ H DGY+++KDRSKD+IISGGENISS EIE VLY HP ++ AAVV RPD W E P
Sbjct: 429 DLGVQHEDGYVQLKDRSKDIIISGGENISSIEIEEVLYKHPQISAAAVVARPDDKWGETP 488
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546
CAFV LK + TE DI+ YC+ + + P+TVVF D LPKT+TGK+QK+VL +
Sbjct: 489 CAFVELKENSS-----VTETDIVAYCKEHLASFKSPRTVVFTD-LPKTSTGKIQKFVLRE 542
Query: 547 IANSMS 552
A +++
Sbjct: 543 QAKALA 548
>gi|351731437|ref|ZP_08949128.1| AMP-dependent synthetase and ligase [Acidovorax radicis N35]
Length = 552
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/550 (44%), Positives = 332/550 (60%), Gaps = 21/550 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN L+PL FIER A D +I++ TW TY RC QLAS+L GI V+
Sbjct: 14 ANFAALSPLSFIERTAEVYPDRLAIVHGPLRQTWGATYARCRQLASALVQAGIGKNDTVA 73
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
V+ PN P M E HF VPM+GA+ N +NTRLD I+ +L H E+K V VD + + +
Sbjct: 74 VMLPNTPPMVEAHFGVPMAGAVLNALNTRLDPEAIAFMLDHGEAKAVIVDPEFTGTMAKA 133
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
+++ TP V+ D ++ + D YE +A GDP F+W P +
Sbjct: 134 LAVRT--GTTPIRVIEVQDALYGPAAQ---SLGGTD----YEAFVAMGDPTFAWRLPDDE 184
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + LNYT GTT PKGVV ++ A+ ++++W +PK +V LWTLPMFH NGW F
Sbjct: 185 WDAIALNYTSGTTGNPKGVVYHHRGAASNAISNVLEWDMPKHAVYLWTLPMFHCNGWCFP 244
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ------LDR 302
W A NVCLR+ DA +F IR+HGVTH CGAPIV LL ++P+A +
Sbjct: 245 WTIAARAGVNVCLRRVDAQAIFDAIRQHGVTHYCGAPIVHGLLVNAPDAMKSGVQSLAQG 304
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
V+ + AG+ PPA ++ E +GF ++H YG TE+ G CA W+ L ERA L
Sbjct: 305 GVKAMVAGAAPPASMIEGMEKMGFDLTHVYGLTEVYGPATVCAKHEAWDALDIGERARLN 364
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
ARQGVR +V ++DPET L V +DG+T GEI+ +G M GYLK+P+AT + G
Sbjct: 365 ARQGVRYHLERDVRVLDPETMLPVPQDGETMGEIMFKGNIAMKGYLKNPKATDEAFAGGW 424
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
+++GD+ + +PDGY++IKDRSKD+IISGGENISS E+E VLY HP V AAVV +PD W
Sbjct: 425 FHSGDLAVQYPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPDVLAAAVVAKPDAKW 484
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E PCAFV LK G + T +DI+ +C+ + + VP+ VVF D LPKT+TGK+QK+
Sbjct: 485 GETPCAFVELKAGATA-----TAEDIVAHCKKHLAGFKVPRAVVFGD-LPKTSTGKIQKF 538
Query: 543 VLGDIANSMS 552
L +A S +
Sbjct: 539 ELRKLAGSAA 548
>gi|27379624|ref|NP_771153.1| acyl-CoA synthetase [Bradyrhizobium japonicum USDA 110]
gi|27352776|dbj|BAC49778.1| blr4513 [Bradyrhizobium japonicum USDA 110]
Length = 555
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/547 (44%), Positives = 339/547 (61%), Gaps = 23/547 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PL+PL F+ R+A D S +Y ++TW+QTY RC + AS L+ GI
Sbjct: 14 LDKTPANYVPLSPLSFLARSAAVYPDHVSTVYEGRSFTWAQTYERCRRFASYLAGKGIGV 73
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM E+HFAVPM+GA+ N +N RLDA +I+ L H ++++ VD SS
Sbjct: 74 GDTVAAMLPNIPAMNEVHFAVPMTGAVLNALNIRLDAPSIAFQLDHGGARIILVDPEFSS 133
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + ++ S V+ DD RI + YE +A+GDP F+ +
Sbjct: 134 VITDALAQM---SGPKPFVIDVDDPAFKGGK----RIGEIE----YEAAVAQGDPDFTAI 182
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
PK + D + L+YT GTT PKGVV ++ ++ AV +++ + + V LWTLPMFH N
Sbjct: 183 PPKDEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGNLGQHPVYLWTLPMFHCN 242
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ---- 299
GW F W A NVCLRK + +F LI++HGVTHMCGAPIV N L ++P+A +
Sbjct: 243 GWCFPWTIAASAGINVCLRKVEPTKIFELIKQHGVTHMCGAPIVYNTLINAPDAPKETST 302
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
R V L AG+ PP VL E++G ++H YG TE+ G CA +P W++LP E
Sbjct: 303 GNAARRVVGLIAGAAPPVAVLEGAENIGIKLTHVYGLTEVYGPASVCAEQPGWDELPPAE 362
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
RA +K RQGV V +++P+T V RDG+T GE++ RG +M GYLK+ +AT +
Sbjct: 363 RARMKRRQGVPYPLEEGVTVINPQTMQEVPRDGETIGEVMFRGNIVMKGYLKNEKATKEA 422
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
+ G ++TGD+G++ GY+ IKDRSKD+IISGGENISS E+E +LY HP V AAVV +
Sbjct: 423 FEGGWFHTGDLGVLDEHGYVIIKDRSKDIIISGGENISSVEVEDILYKHPAVLFAAVVAK 482
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PDP W E+PCAFV LK G + TE +II +CR+ + + PK +VF +PKT+TG
Sbjct: 483 PDPKWGEVPCAFVELKDGASA-----TEAEIIAFCRSHMSGFKTPKAIVF-GPIPKTSTG 536
Query: 538 KVQKYVL 544
K+QK++L
Sbjct: 537 KIQKFLL 543
>gi|144900132|emb|CAM76996.1| catalytic [Magnetospirillum gryphiswaldense MSR-1]
Length = 540
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 249/555 (44%), Positives = 339/555 (61%), Gaps = 27/555 (4%)
Query: 2 DR-LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
DR L N AN LTPL F+ER A+ D ++I+ TW +T R +LA+ L++ G
Sbjct: 8 DRDLDKNAANFVALTPLTFLERTASVWPDRVAVIHGPVRRTWGETLVRVRRLAAGLAARG 67
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G V+++A N P ++E HFA+P++GA+ N INTRLDA I+ IL+H E+KL+ VD
Sbjct: 68 IGKGDTVAMLAANTPELFEGHFAIPLAGAVLNAINTRLDAEAITFILEHGEAKLLIVDRE 127
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD--TYENMLAKGDP 178
S + + + K P V DD P + + TYE++LA D
Sbjct: 128 FSKVTKKALEGL--KVKIP--VFDIDD----------PTYVGGELIGEGTYEDLLA--DE 171
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
W P + D + LNYT GTT PKGVV ++ ++ AV + + W +P V LWTLP
Sbjct: 172 LHPWTMPGDEWDAIALNYTSGTTGNPKGVVYHHRGAYLNAVSNALGWTLPDGPVYLWTLP 231
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA- 297
MFH NGW F W A T+VCLR + LIR V + CGAPIVLN+++++P A
Sbjct: 232 MFHCNGWCFPWTMAAAAGTSVCLRHVRVEPILDLIRSENVGYFCGAPIVLNMINNAPAAL 291
Query: 298 -KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
+ + +PV+++TAG+ PPA V+ E +G+ V+H YG TE+ G + C W KWN L
Sbjct: 292 KEGISQPVKVMTAGAAPPAAVIAGMERMGWEVTHVYGLTEVYGPVIQCVWHDKWNDLSID 351
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
++A +KARQGVR L V + DP T +DG T GEI MRG ++M GYLK+P+AT +
Sbjct: 352 DKAKIKARQGVRGPMLEAVMVADPMTLEPCPKDGMTMGEIFMRGNNVMKGYLKNPKATVE 411
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
+ G ++TGD+ + H DGY+EIKDRSKD+IISGGENISS E+E VLY HP V EAAVV
Sbjct: 412 SFEGGWFHTGDLAVWHADGYVEIKDRSKDIIISGGENISSIEVEDVLYKHPDVMEAAVVA 471
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
RPD W E PCAFVSLK G TE+DII +C+A + + P+T+VF LPKT+T
Sbjct: 472 RPDEKWGETPCAFVSLKDGA-----TCTEEDIIAFCKAHMAGFKTPRTIVF-GPLPKTST 525
Query: 537 GKVQKYVLGDIANSM 551
GK+QK++L A +
Sbjct: 526 GKIQKFMLRQQAKEL 540
>gi|262369847|ref|ZP_06063174.1| acyl-CoA synthetase [Acinetobacter johnsonii SH046]
gi|262314886|gb|EEY95926.1| acyl-CoA synthetase [Acinetobacter johnsonii SH046]
Length = 547
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 249/552 (45%), Positives = 347/552 (62%), Gaps = 20/552 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L PAN L+PL ++ERAA +II+ +W +TY RC Q AS L GI
Sbjct: 6 DELPRTPANFVALSPLRYLERAAYIYPHQDAIIHGHRHISWRETYLRCCQFASQLQKLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PNIPAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 TKNDTVSVLLPNIPAMIEAHFAVPMTGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSS-SSPPPRIPPADFVDTYENMLAKGDPQF 180
+S+ E ++L K V+ DD E + ++P +I YE+ L +GD F
Sbjct: 126 ASVAQEALALV----KRDIFVIDVDDAEYENCFAAPIGQI-------EYEDWLTEGDENF 174
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
W P+ + D + LNYT GTT PKGVV ++ +I A ++I + ++ LWTLP+F
Sbjct: 175 EWHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYINAASNIIACGMTPRATYLWTLPLF 234
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGW F W A G TN+CLRK D F LI +H V + CGAPIVL++L ++PE +++
Sbjct: 235 HCNGWCFAWTMAANGGTNICLRKIDPELTFKLIAEHKVDYFCGAPIVLSMLINTPEEQRI 294
Query: 301 --DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
+ V ++ AG+ PPA ++ +G V+H YG TE G + CA + W+ L +E+
Sbjct: 295 HFEHRVEVMVAGAAPPAAIIEGMRHIGINVTHVYGLTETYGPSALCASQAGWSDLSIQEQ 354
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A L +RQGV + ++DP+T V DGQT GEI+ RG +M GYLK+PEAT++
Sbjct: 355 AQLHSRQGVPYPLQDGMKVLDPDTMQPVPHDGQTMGEIMFRGNIVMKGYLKNPEATAEAF 414
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
G ++TGD+ + PDGY +I DRSKDVIISGGENISS E+E +LY HP + AAVV +P
Sbjct: 415 AGGWFHTGDLAVCQPDGYAKITDRSKDVIISGGENISSLEVEEILYQHPAILTAAVVAKP 474
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
DP WQE+PCAF+ LK G + TT ++II++C+ + R+ VPK VV I E+PKT+TGK
Sbjct: 475 DPRWQEVPCAFIELKAGKE-----TTPEEIIEFCKQHLARFKVPKDVV-ITEIPKTSTGK 528
Query: 539 VQKYVLGDIANS 550
+QK+VL D A
Sbjct: 529 LQKFVLRDWAKE 540
>gi|357114182|ref|XP_003558879.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Brachypodium
distachyon]
Length = 562
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 253/556 (45%), Positives = 343/556 (61%), Gaps = 27/556 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTPL F+ERAA ++++ + Y+W QT RCL AS+L+ G+ VV+
Sbjct: 9 ANHAPLTPLSFLERAALVYGARTAVVFGEKEYSWRQTRERCLAGASALARLGVGRRDVVA 68
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+A N PAMYELHF+VPM+GA+ T+NTR DA +S++L+HS +K+ V+ +L
Sbjct: 69 ALASNTPAMYELHFSVPMAGAVLCTLNTRHDAAMVSVLLQHSGAKVFLVESQFLALARHA 128
Query: 129 VSLFPP----HSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
++L +K P LV I + P YE +L F
Sbjct: 129 LALLAESNNNKNKPPLLVTIGIGNADGGEAEP-----------EYEALLRSAPGGFGIRW 177
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
P +LDP+ LNYT GTTS PKGVV ++ ++ ++ + + + V LWT+PMFH NG
Sbjct: 178 PADELDPISLNYTSGTTSRPKGVVYSHRGAYLNSLATALANEMRAMPVYLWTVPMFHCNG 237
Query: 245 WSFTWGAAVVGATNVCL----RKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ- 299
W W A G T+VC+ +F I +H VT+M GAP VL ++ ++P ++Q
Sbjct: 238 WCMVWATAAQGGTSVCMPGSASGMSPKGIFDHIARHKVTNMGGAPTVLGMIVNAPASEQT 297
Query: 300 ----LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
+ VRI T G+PPP VL + + LGF V HGYG TE G C WKP+W+ LPA
Sbjct: 298 PPLLASKRVRISTGGAPPPPHVLAKMDELGFDVVHGYGLTETYGPATLCVWKPEWDALPA 357
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
ERA ++ARQGV + L ++I DP T +V DG+ GE+++RG ++M GY KD AT+
Sbjct: 358 AERARIRARQGVPHVMLDGLEIKDPVTMETVPSDGRAVGEVMLRGNTVMSGYYKDAAATA 417
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
+ M+ G TGD+G+ HPDGY+++KDRSKD+IISGGENISS E+ES L+ HP V +AAVV
Sbjct: 418 EAMRGGWLRTGDLGVRHPDGYVQLKDRSKDIIISGGENISSIEVESALFGHPAVLDAAVV 477
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
RPD W E PCAFV+LK G + TT DII++CRAR+PRYM PKTVVF DELPKT+
Sbjct: 478 ARPDDHWGETPCAFVTLKEGASA---TTTAHDIIEFCRARLPRYMAPKTVVFADELPKTS 534
Query: 536 TGKVQKYVLGDIANSM 551
TGK QKYVL + A +M
Sbjct: 535 TGKTQKYVLREKARAM 550
>gi|149912873|ref|ZP_01901407.1| AMP-dependent synthetase and ligase [Roseobacter sp. AzwK-3b]
gi|149813279|gb|EDM73105.1| AMP-dependent synthetase and ligase [Roseobacter sp. AzwK-3b]
Length = 544
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/551 (44%), Positives = 349/551 (63%), Gaps = 19/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PLTPL F+ERAA+ D +I++ D +++ Y R +LAS+L+ GI+
Sbjct: 10 LDRTPANYQPLTPLTFLERAASVFPDHTAILHGDLRRSYAAFYARSRRLASALAQRGISR 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS + N PAM E H+ VPM GA+ ++INTRLDA I+ L H+ +KLV VD +
Sbjct: 70 GDTVSALLANTPAMLECHYGVPMCGAVLHSINTRLDAAIIAFQLDHAMAKLVIVDREFAP 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L+ + ++L S TP ++L DD E P + YE LA GDP F+W+
Sbjct: 130 LMQDALALA---SVTPDVILY-DDPEYDGPGDMPEAM-------DYEAFLATGDPDFAWL 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + D + +NYT GTT PKGVV ++ +++A + + + K SV LWTLPMFH N
Sbjct: 179 MPEDEWDAISINYTSGTTGDPKGVVSHHRGAYLLAQGNALTTSMAKHSVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GWSF W + + T+VCLR+ A ++ + ++GVTH+CGAPIV++L++S+ ++ + LD
Sbjct: 239 GWSFPWTLSAIIGTHVCLRQVRAEPIWRALAENGVTHLCGAPIVMSLINSADDSVKRPLD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R V+ TA +PPP ++ ++ GF V+H YG TE G V W W+ LP ++A+L
Sbjct: 299 RRVQFFTAAAPPPESLMAEMDAAGFDVTHLYGLTETYGPAVVNEWHADWSSLPGPQKAAL 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR + L +D++DP+T V RDG T GE++ RG +M GY + PEAT K + G
Sbjct: 359 KARQGVRYLPLEGLDVLDPDTMRPVPRDGVTMGEVMFRGNVVMKGYFRSPEATQKALAGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G++HPDGY+++KDRSKD+IISGGENISS E+E LY HP V AAVV P
Sbjct: 419 WFHSGDLGVVHPDGYIQLKDRSKDIIISGGENISSIEVEEALYRHPAVAVAAVVAMPHDK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV L +G D+ E + +CR + Y VP +VF E+P+T+TGK+QK
Sbjct: 479 WGETPCAFVQLTSGHDA-----DEASLRAWCRDHLAPYKVPGRIVFA-EIPRTSTGKIQK 532
Query: 542 YVLGDIANSMS 552
+VL D A S++
Sbjct: 533 FVLRDQARSLA 543
>gi|170740907|ref|YP_001769562.1| AMP-dependent synthetase and ligase [Methylobacterium sp. 4-46]
gi|168195181|gb|ACA17128.1| AMP-dependent synthetase and ligase [Methylobacterium sp. 4-46]
Length = 543
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 250/550 (45%), Positives = 342/550 (62%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PLTPL F+ERAAT D ++++ ++++ Y R +LAS+L++ GI
Sbjct: 11 LDRNPANFQPLTPLTFLERAATVFPDHVAVVHGPLRHSYANLYARTRRLASALAARGIGR 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ N PAM E H+ VPM+GA+ NT+NTRLDA I+ L H E+K++ D +
Sbjct: 71 GDTVAVMLANTPAMIECHYGVPMTGAVLNTLNTRLDAAIIAFCLDHGEAKVLITDREFAR 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ ++L +K LV+ DD E R+ D YE LA GDP +W
Sbjct: 131 VIKPALAL----AKVRPLVIDYDDPEFGGEGE---RLGSLD----YEAFLASGDPAHAWS 179
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++AV ++I + K V LWTLPMFH N
Sbjct: 180 LPGDEWDAISLNYTSGTTGDPKGVVYHHRGASLLAVGNVITTGLGKHPVYLWTLPMFHCN 239
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW F W +VV T+VCLR+ A ++ I HGVTH+CGAPIV+ LL ++P A++ P
Sbjct: 240 GWCFPWTLSVVAGTHVCLRQVRAKPMYDAIADHGVTHLCGAPIVMQLLLNAPAAERRALP 299
Query: 304 VRI--LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R+ TA +PPP VL GF V+H YG TE G V W W+ L E+A+
Sbjct: 300 HRVSFFTAAAPPPEAVLAGMAEAGFDVTHLYGLTETYGPAVVNEWHADWDALTKPEQAAR 359
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L +D++DPET V DGQ+ GE++ RG +M GYLK+P AT + G
Sbjct: 360 KARQGVRYPPLEALDVLDPETMRPVPADGQSLGEVMFRGNVVMRGYLKNPTATQAAFRGG 419
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G+ HPDGY+++KDRSKD+IISGGENISS E+E L+ HP V AAVV +PD
Sbjct: 420 WFHSGDLGVKHPDGYIQLKDRSKDIIISGGENISSIEVEEALFKHPAVAAAAVVAKPDEK 479
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK G M + +++I +CR + Y VPK VVF ELPKT+TGK+QK
Sbjct: 480 WGETPCAFVELK-----GSEMVSAEELIGWCRQSLAGYKVPKHVVFT-ELPKTSTGKIQK 533
Query: 542 YVLGDIANSM 551
+VL ++A ++
Sbjct: 534 FVLREMAKAL 543
>gi|126664342|ref|ZP_01735326.1| acyl-CoA synthase [Marinobacter sp. ELB17]
gi|126630668|gb|EBA01282.1| acyl-CoA synthase [Marinobacter sp. ELB17]
Length = 537
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 237/540 (43%), Positives = 339/540 (62%), Gaps = 20/540 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN LTPL ++R+AT D ++I D ++ + YRRC Q++ +L G+NPG V+
Sbjct: 12 ANFSALTPLTLLQRSATVYPDKQAVIDVDLVLSYGELYRRCCQMSDALRRRGVNPGDTVA 71
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+++PN M E H++VPM+GA+ NTIN RLDA T+S IL H E++++F D ++
Sbjct: 72 ILSPNSHEMLESHYSVPMAGAVINTINIRLDAATLSFILGHGEARVLFYDTDWEDVVRAA 131
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
VS + P L++ I S + + D YEN+L +G+ + SW RP +
Sbjct: 132 VSEL----EAPPLLI-----SIESKAGVSDGLAQQD----YENLLLEGNAEASWQRPNDE 178
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + LNYT GTT PKGV+ ++ F+ A+ + + + + ++V LWTLPMFH NGW++T
Sbjct: 179 WDAIALNYTSGTTGNPKGVIYHHRGAFLAAMTNSMVFQMTPETVYLWTLPMFHCNGWAYT 238
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS--PEAKQLDRPVRI 306
W VG T+VCLR D ++ I + VTHMCGAP+V+N+L E +L R +
Sbjct: 239 WAITAVGGTHVCLRDVDPMNIYRHIETYRVTHMCGAPVVMNMLLQELGREKLKLSRSTQF 298
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
G+ PP+ V+ + E +GF ++H YG TE G + C +P+W LP +RA +RQG
Sbjct: 299 ALGGAAPPSSVIRKAEEIGFQITHLYGLTETFGPSALCVPQPEWQALPLEQRALKMSRQG 358
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
V T GL E+ ++D +G SV DG+T GEI +RG ++M GYLK+PEAT+ ++ ++TG
Sbjct: 359 VSTHGLDEIAVLDVVSGESVPADGKTMGEICIRGNTVMKGYLKNPEATANAFRNEWFHTG 418
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+ +MHPD Y+EI+DR+KDVIISGGENISS E+E VLY HP V+EAAVV D W E+P
Sbjct: 419 DLAVMHPDHYVEIRDRAKDVIISGGENISSLEVEEVLYRHPQVSEAAVVAMADEKWGEVP 478
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546
CAFV L D +T E DII +CR +P + P+ VVF ELPKTATGK++K +L D
Sbjct: 479 CAFVHL---IDDSEEITCE-DIIAFCREHMPHFKAPRKVVF-GELPKTATGKIRKNILRD 533
>gi|40062515|gb|AAR37460.1| AMP-binding family protein [uncultured marine bacterium 106]
Length = 493
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/512 (45%), Positives = 333/512 (65%), Gaps = 24/512 (4%)
Query: 44 QTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTI 103
+TY RC +LAS+LS GI G VSV+APNIPA++E HF V M+GA+ NT+N R++A T+
Sbjct: 2 ETYIRCCRLASALSKRGIGKGDTVSVMAPNIPAIFEAHFGVLMTGAVLNTLNIRMEAETL 61
Query: 104 SIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPA 163
+ I +H+E+K++ D SS + +S K LV+ DD E S
Sbjct: 62 ANIFEHAETKVLLTDRESSPQIKVALS----KVKRDILVIDIDDPETDS----------G 107
Query: 164 DFVD--TYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDS 221
+++ YE L++GDP+F V P+ D + LNYT GTT PKGVV + +++A +
Sbjct: 108 EYLGMLEYEAFLSEGDPKFEAVLPEDDWQAVSLNYTSGTTGIPKGVVYHTRGAYLLATGN 167
Query: 222 LIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHM 281
++ W +P + V LWTLPMFH NGW F W ++G T+VCLRK A ++ I +H VTH
Sbjct: 168 VLAWEMPHRPVYLWTLPMFHCNGWCFPWTITMLGGTHVCLRKVTAKNIYNSIAEHHVTHF 227
Query: 282 CGAPIVLNLLSSSPEAKQLDRP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAG 339
CGAPIV+N++S++P+ +Q + P V I+TA +PPP V+ + E GF V+H YG TE+ G
Sbjct: 228 CGAPIVMNMISNAPKEEQRELPHRVEIMTAAAPPPPTVIAQMEEAGFNVTHVYGLTEVYG 287
Query: 340 VNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMR 399
V C W+ WN+ +A LK RQGVR L + + +PET V DG+T GE++M+
Sbjct: 288 PAVVCEWQEAWNEKDKTTQAQLKGRQGVRYHVLEGLTVANPETLEPVPADGETMGEVLMQ 347
Query: 400 GGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEI 459
G +M GY K+P+AT++ G +++GD+G++HPDGY+E+KDRSKD+IISGGENISS EI
Sbjct: 348 GNIVMKGYFKNPKATAQAFAGGWFHSGDIGVIHPDGYIELKDRSKDIIISGGENISSVEI 407
Query: 460 ESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRY 519
E+VLY + EAAVV RPD W E+P AFVSLKTG E+ +I++CR ++P Y
Sbjct: 408 ENVLYQQEDILEAAVVARPDEKWGEVPFAFVSLKTGCS-----LNEQKVIEFCRTKLPGY 462
Query: 520 MVPKTVVFIDELPKTATGKVQKYVLGDIANSM 551
+PK VVF ELPKT+TGK++K +L + A +
Sbjct: 463 KIPKYVVFC-ELPKTSTGKIRKSILREQAKKL 493
>gi|374364646|ref|ZP_09622747.1| acyl-CoA synthetase [Cupriavidus basilensis OR16]
gi|373103778|gb|EHP44798.1| acyl-CoA synthetase [Cupriavidus basilensis OR16]
Length = 545
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 244/543 (44%), Positives = 330/543 (60%), Gaps = 20/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PLTP+ F+ RAA D +I++ W +TY R +LAS L+ G+
Sbjct: 9 LGKNPANHVPLTPIDFLARAAGVYGDRLAIVHGPVRQNWRETYARARRLASGLARLGVGK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PN PAM E HF VPM+GA+ N +N RLDA + +L+H E++++ D +
Sbjct: 69 GDTVAALLPNTPAMVEAHFGVPMAGAVLNALNIRLDASNLIFMLRHGEARVLLADTEFAG 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L ++ + P K+V + D + P+ PA YE +LA GDP+F+W
Sbjct: 129 LARQIANEIP----GLKVVAVVD--------ALGPQDAPAFGETDYERLLASGDPEFAWQ 176
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ I A+ ++++W +PK +V LWTLPMFH N
Sbjct: 177 MPADEWDAIALNYTSGTTGDPKGVVYHHRGAAINAISNILEWDLPKHAVYLWTLPMFHCN 236
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW F W A NVCLRKF+ VF L+R GVTH C APIV L ++P A + L
Sbjct: 237 GWCFPWTIAARAGVNVCLRKFEPKLVFDLMRDEGVTHYCAAPIVHTALVNAPPAWREGLR 296
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PVR + AG+PPPA VL + E++GF ++H YG TE G CA + W L +RA+
Sbjct: 297 GPVRGMVAGAPPPAAVLAQMEAMGFALTHVYGLTETYGPAAVCAEQDDWASLSQEDRATK 356
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR TEV ++DP+T V DG+ GEI+ RG M GYLK+ +AT + G
Sbjct: 357 KARQGVRYHLQTEVAVLDPDTMQPVASDGEEIGEIMFRGNICMKGYLKNEKATREAFAGG 416
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G+ PDGY++IKDRSKD+IISGGENISS E+E +Y HP V AVV +PD
Sbjct: 417 WFHTGDLGVCTPDGYVKIKDRSKDIIISGGENISSVEVEDAIYRHPAVLAVAVVAQPDVK 476
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK G + T +++I +CR + + VPK V F LPKT+TGK+QK
Sbjct: 477 WGETPCAFVELKDGASA-----TAEELIAHCRTLLAGFKVPKAVYF-GPLPKTSTGKIQK 530
Query: 542 YVL 544
+ L
Sbjct: 531 FEL 533
>gi|399545294|ref|YP_006558602.1| medium-chain-fatty-acid--CoA ligase [Marinobacter sp. BSs20148]
gi|399160626|gb|AFP31189.1| Medium-chain-fatty-acid--CoA ligase [Marinobacter sp. BSs20148]
Length = 537
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/540 (43%), Positives = 335/540 (62%), Gaps = 20/540 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN LTPL ++R+AT D ++I D ++ + YRRC Q++ +L G+NPG V+
Sbjct: 12 ANFSALTPLTLLQRSATVYPDKQAVIDVDLVLSYGELYRRCCQMSDALLRRGVNPGDTVA 71
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+++PN M E H++VPM+GA+ NTIN RLDA T++ IL+H E++++F D +++
Sbjct: 72 ILSPNSHEMLESHYSVPMAGAVINTINIRLDAATLAFILEHGEARILFYDTDWENVVRAA 131
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
VS P L++ I S + + D YE+ L +G + W RP +
Sbjct: 132 VSGL----DVPPLLI-----SIESKAGKSDGLAQQD----YESFLLEGSAETCWQRPNDE 178
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + LNYT GTT PKGVV ++ F+ A+ + + + + ++V LWTLPMFH NGW++T
Sbjct: 179 WDAIALNYTSGTTGNPKGVVYHHRGAFLAAMTNSMVFQMTPETVFLWTLPMFHCNGWAYT 238
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS--PEAKQLDRPVRI 306
W VG T+VCLR D ++ I +GVTHMCGAP+V+N+L E +L R +
Sbjct: 239 WAITAVGGTHVCLRNVDPMNIYRHIETYGVTHMCGAPVVMNMLLQELGREELKLSRSTQF 298
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
G+ PP+ V+ + E +GF ++H YG TE G + C +P W LP +RA +RQG
Sbjct: 299 ALGGAAPPSSVIRKAEEIGFQITHLYGLTETFGPSALCMPQPDWQALPLEQRALKMSRQG 358
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
V T GL E+ ++D +G V DG+T GEI +RG ++M GYLK+PEAT+ G ++TG
Sbjct: 359 VSTHGLDEIAVLDMVSGEYVPADGKTMGEICIRGNTVMKGYLKNPEATAGAFSHGWFHTG 418
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+ +MHPD Y+EI+DR+KDVIISGGENISS E+E VLY HP V+EAAVV D W E+P
Sbjct: 419 DLAVMHPDQYVEIRDRAKDVIISGGENISSLEVEEVLYRHPQVSEAAVVAIADEKWGEVP 478
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546
CAFVSL ++ T DII +CR +P + P+ VVF ELPKTATGKV+K +L D
Sbjct: 479 CAFVSLTDNSEE----ITSADIIAFCREHMPHFKAPRKVVF-GELPKTATGKVRKNILRD 533
>gi|328542507|ref|YP_004302616.1| AMP-dependent synthetase/ligase [Polymorphum gilvum SL003B-26A1]
gi|326412253|gb|ADZ69316.1| AMP-dependent synthetase and ligase [Polymorphum gilvum
SL003B-26A1]
Length = 544
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/550 (43%), Positives = 341/550 (62%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PL+PL F+ RAA D ++++ + + YRRC LAS+L+ GI
Sbjct: 12 LDRTAANYAPLSPLSFLARAADVFPDRTAVVHGSQRFDYRTFYRRCRALASALAGLGIGR 71
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V+V+ N+P M E H+ VPM+GA+ +++NTRLDA I+ L H+ES++V D +
Sbjct: 72 NDTVTVMLSNVPPMLEAHYGVPMAGAVLHSLNTRLDAAIIAFQLDHAESRVVITDREFAP 131
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + ++L ++ +V+ D R+ D Y+ +A GDP F+W
Sbjct: 132 VMRQALAL----ARVRPVVIDYSDPVYPQEGE---RLGCID----YDAFVASGDPNFAWS 180
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + D + LNYT GTT PKGVV ++ +++A +++ + K V LWTLPMFH N
Sbjct: 181 LPEDEWDAITLNYTSGTTGNPKGVVYHHRGAYLLAQANILTASMAKHPVYLWTLPMFHCN 240
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLD 301
GW F W +VV T+VCLR ++ LI GVTH+CGAPI+++ L +P + + LD
Sbjct: 241 GWCFPWSLSVVSGTHVCLRWVRPKAIWDLIADEGVTHLCGAPIIMSTLLGTPPVDKRSLD 300
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R V TA +PPP VL + GF V+H YG TE+ G V WK +W+ LPA E+A+
Sbjct: 301 RTVEFFTAAAPPPESVLAAMKDAGFNVTHLYGLTEVYGPAVVNDWKGEWDGLPADEQAAK 360
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR + L + ++DP T V DGQT GE++ RG +M GYLK+ EAT + G
Sbjct: 361 KARQGVRYVALEGLTVMDPATMTPVPADGQTLGEVMFRGNVVMKGYLKNREATEEAFAGG 420
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G++HPDGY+++KDRSKD+IISGGENISS E+E VLY HP V AAVV RPD
Sbjct: 421 WFHSGDLGVLHPDGYIQLKDRSKDIIISGGENISSIEVEDVLYKHPAVQAAAVVARPDER 480
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK G T+E++II +CRAR+ + P+TVVF ELPKT+TGK+QK
Sbjct: 481 WGETPCAFVELKAGA-----QTSEEEIIAFCRARMAHFKAPRTVVFC-ELPKTSTGKIQK 534
Query: 542 YVLGDIANSM 551
+ L + A +
Sbjct: 535 FALRERARGL 544
>gi|421602710|ref|ZP_16045254.1| acyl-CoA synthetase [Bradyrhizobium sp. CCGE-LA001]
gi|404265181|gb|EJZ30317.1| acyl-CoA synthetase [Bradyrhizobium sp. CCGE-LA001]
Length = 549
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/544 (44%), Positives = 336/544 (61%), Gaps = 21/544 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PL+PL F+ R+A D S +Y ++TW+QT+ RC + AS L+ GI
Sbjct: 12 LDKTPANYVPLSPLSFLARSAAIFPDHVSTVYEGRSFTWAQTHERCKRFASYLAGKGIGV 71
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM E HFAVPM+GA+ N +N RLDA +I+ L H +K++ VD SS
Sbjct: 72 GDTVAAMLPNIPAMNEAHFAVPMTGAVLNALNIRLDAPSIAFQLDHGGAKVILVDPEFSS 131
Query: 124 LLLEVVSLFPPHSKTPK-LVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ + ++ PK V+ DD RI + YE L GDP F+
Sbjct: 132 VISDALA----QMTGPKPFVIDVDDTAFKGGK----RIGEIE----YEAALGLGDPNFAA 179
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
+ P + D + L+YT GTT PKGVV ++ ++ AV +++ + + V LWTLPMFH
Sbjct: 180 ILPTDEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGNLGQHPVYLWTLPMFHC 239
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
NGW F W A NVCLRK + +F LI++HGVTHMCGAPIV N L ++P+A + +
Sbjct: 240 NGWCFPWTIAAAAGINVCLRKVEPSKIFELIKQHGVTHMCGAPIVYNTLINAPDAPKGNA 299
Query: 303 PVRI--LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
R+ L AG+ PP VL ES+G ++H YG TE+ G CA +P W+ LPA ERA
Sbjct: 300 ARRVVGLIAGAAPPVAVLEGAESIGIKLTHVYGLTEVYGPASVCAEQPGWDDLPAAERAR 359
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
+K RQGV V +++P+T V RDG+T GE++ RG +M GYLK+ +AT + +
Sbjct: 360 MKRRQGVPYPLEEAVTVINPQTMREVPRDGETIGEVMFRGNIVMKGYLKNEKATREAFEG 419
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+G++ GY+ IKDRSKD+IISGGENISS E+E +LY HP V AAVV +PD
Sbjct: 420 GWFHTGDLGVLDEHGYVIIKDRSKDIIISGGENISSVEVEDILYKHPAVLFAAVVAKPDA 479
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV LK G + +E DII +CR+ + + PK +VF +PKT+TGK+Q
Sbjct: 480 KWGEVPCAFVELKDGASA-----SEADIIAFCRSHLSGFKTPKAIVF-GPIPKTSTGKIQ 533
Query: 541 KYVL 544
K++L
Sbjct: 534 KFLL 537
>gi|90424207|ref|YP_532577.1| acyl-CoA synthetase [Rhodopseudomonas palustris BisB18]
gi|90106221|gb|ABD88258.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
BisB18]
Length = 549
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/550 (44%), Positives = 333/550 (60%), Gaps = 21/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PL+PL F+ER+AT + S +Y +TWSQT RC + A L+S G+
Sbjct: 12 LDQTPANYVPLSPLSFLERSATVYPELTSTVYEGRHFTWSQTRARCHRFACYLASRGVAR 71
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PN+PAM E+HFAVPM GA+ N +N RL+ +I+ L H +K++ VD ++
Sbjct: 72 GDTVAAMLPNVPAMNEVHFAVPMLGAVLNALNIRLEPSSIAFQLDHGGAKVILVDPEFAA 131
Query: 124 LLLEVVSLFPPHSKTPK-LVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ + ++L P+ LV+ DD S RI + YE LA GDP F
Sbjct: 132 VISDALALM----AGPRPLVIDVDDASFSGGQ----RIGEIE----YEAALAAGDPDFVG 179
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
VRP + D + L YT GTT PKGVV ++ ++ AV +++ V LWTLPMFH
Sbjct: 180 VRPDDEWDAISLGYTSGTTGNPKGVVTHHRGAYLNAVSNILAANFGPHPVYLWTLPMFHC 239
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL-- 300
NGW F W A NVCLRK D +F LI +HGVTHM GAPIV N L ++P A +
Sbjct: 240 NGWCFPWTIAAAAGVNVCLRKVDPAKIFELIEQHGVTHMSGAPIVYNTLINAPSAPKTPR 299
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
++PV L AG+ PP VL E++G ++H YG TE+ G CA +P W+ LP ERA
Sbjct: 300 NKPVVGLIAGAAPPVAVLAGAETIGIKLTHVYGLTEVYGPASVCAEQPGWDDLPVAERAQ 359
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
LK RQGV V + DP+T V RDG+T GE++ RG +M GYLK+ +AT +
Sbjct: 360 LKRRQGVPYPLQEAVTVRDPDTMEEVPRDGETIGEVMFRGNIVMKGYLKNEKATQEAFAG 419
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+G++ GY+ IKDRSKD+IISGGEN+SS E+E +LY HP + AAVV +PDP
Sbjct: 420 GWFHTGDLGVLDEFGYVIIKDRSKDIIISGGENVSSVEVEDILYKHPAILFAAVVAKPDP 479
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV LK G + TE +II +CR +P + PK V F +PKT+TGK+Q
Sbjct: 480 KWGEVPCAFVELKDGAQA-----TEAEIIAFCREHMPGFKTPKVVTFA-TIPKTSTGKIQ 533
Query: 541 KYVLGDIANS 550
K++L D S
Sbjct: 534 KFMLRDQVKS 543
>gi|383771866|ref|YP_005450931.1| acyl-CoA synthetase [Bradyrhizobium sp. S23321]
gi|381359989|dbj|BAL76819.1| acyl-CoA synthetase [Bradyrhizobium sp. S23321]
Length = 549
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/544 (44%), Positives = 335/544 (61%), Gaps = 21/544 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PL+PL F+ R+A D S +Y ++TW QT+ RC + AS L+ GI
Sbjct: 12 LDKTPANYVPLSPLSFLARSAAVYPDHVSTVYEGRSFTWRQTHERCKRFASWLAGKGIGV 71
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM E HFAVPM+GA+ N +N RLDA +I+ L H +K++ VD S
Sbjct: 72 GDTVAAMLPNIPAMNEAHFAVPMTGAVLNALNIRLDAPSIAFQLDHGGAKIILVDPEFSG 131
Query: 124 LLLEVVSLFPPHSKTPK-LVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ + ++ K PK V+ DD RI + YE +A+GD F
Sbjct: 132 VITDALA----QMKGPKPFVIDVDDASFKGGK----RIGEIE----YEAAIAQGDSDFVA 179
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
+ P+ + D + L+YT GTT PKGVV ++ ++ AV +++ + + V LWTLPMFH
Sbjct: 180 IPPRDEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGNLGQHPVYLWTLPMFHC 239
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
NGW F W A NVCLRK + +F LIR HGVTHMCGAPIV N L ++P+A + +
Sbjct: 240 NGWCFPWTMAAAAGINVCLRKVEPTRIFELIRTHGVTHMCGAPIVYNTLINAPDAPKGNA 299
Query: 303 PVRI--LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
R+ L AG+ PP VL E++G ++H YG TE+ G CA +P W++LP ERA
Sbjct: 300 VRRVVGLIAGAAPPVAVLEGAENIGIKLTHVYGLTEVYGPASVCAEQPGWDELPPAERAR 359
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
+K RQGV V +++P+T V RDG+T GE++ RG +M GYLK+ +AT + +
Sbjct: 360 MKRRQGVPYPLEEGVTVINPQTMQQVPRDGETIGEVMFRGNIVMKGYLKNEKATKEAFEG 419
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+G++ GY+ IKDRSKD+IISGGENISS E+E +LY HP V AAVV +PDP
Sbjct: 420 GWFHTGDLGVLDEHGYVTIKDRSKDIIISGGENISSVEVEDILYKHPAVLFAAVVAKPDP 479
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV LK G + TE DII +CR + + PK VVF +PKT+TGK+Q
Sbjct: 480 KWGEVPCAFVELKDGASA-----TEADIIAFCRTHMSGFKTPKAVVF-GPIPKTSTGKIQ 533
Query: 541 KYVL 544
K++L
Sbjct: 534 KFLL 537
>gi|384218900|ref|YP_005610066.1| medium-chain-fatty-acid--CoA ligase [Bradyrhizobium japonicum USDA
6]
gi|354957799|dbj|BAL10478.1| medium-chain-fatty-acid--CoA ligase [Bradyrhizobium japonicum USDA
6]
Length = 549
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/544 (44%), Positives = 338/544 (62%), Gaps = 21/544 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PL+PL F+ R+A + S +Y ++TW +T+ RC + AS L GI
Sbjct: 12 LDKTPANYVPLSPLSFLARSAAVYPNHVSAVYEGRSFTWRETHERCKRFASWLGGKGIGV 71
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM E+HFAVPM+GA+ N +N RLDA +I+ L H ++++ VD S+
Sbjct: 72 GDTVAAMLPNIPAMNEVHFAVPMTGAVLNALNIRLDAPSIAFQLDHGGARIILVDPEFST 131
Query: 124 LLLEVVSLFPPHSKTPK-LVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ + ++ K PK V+ DD RI + YE +A+GDP F+
Sbjct: 132 VITDALA----QMKGPKPFVVDVDDAAFKGGK----RIGEIE----YEAAVAQGDPDFAA 179
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
+ PK + D + L+YT GTT PKGVV ++ ++ AV +++ + + V LWTLPMFH
Sbjct: 180 IPPKDEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNILAGQLGQHPVYLWTLPMFHC 239
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
NGW F W A NVCLRK + +F LI++HGVTHMCGAPIV N L ++P+A +
Sbjct: 240 NGWCFPWTIAAAAGINVCLRKVEPTKIFELIKQHGVTHMCGAPIVYNTLINAPDAPKGSA 299
Query: 303 PVRI--LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
R+ L AG+ PP VL E++G ++H YG TE+ G CA +P W+ LPA ERAS
Sbjct: 300 ARRVVGLIAGAAPPVAVLEGAENIGIRLTHVYGLTEVYGPASVCAEQPGWDDLPAAERAS 359
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
+K RQGV V +++P+T V RDG+T GE++ RG +M GYLK+ +AT + +
Sbjct: 360 MKRRQGVPYPLEEGVTVINPQTMQEVPRDGETIGEVMFRGNIVMKGYLKNEKATKEAFEG 419
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+G++ GY+ IKDRSKD+IISGGENISS E+E +LY HP V AAVV +PDP
Sbjct: 420 GWFHTGDLGVLDEHGYVIIKDRSKDIIISGGENISSVEVEDILYKHPAVLFAAVVAKPDP 479
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV LK G + E +II +CR + + PK V+F +PKT+TGK+Q
Sbjct: 480 KWGEVPCAFVELKDGASA-----IEAEIIAFCRTHMSGFKTPKAVIF-GPIPKTSTGKIQ 533
Query: 541 KYVL 544
K++L
Sbjct: 534 KFLL 537
>gi|323136139|ref|ZP_08071221.1| AMP-dependent synthetase and ligase [Methylocystis sp. ATCC 49242]
gi|322398213|gb|EFY00733.1| AMP-dependent synthetase and ligase [Methylocystis sp. ATCC 49242]
Length = 552
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/550 (44%), Positives = 341/550 (62%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PLTPL F+ RAA + +I++ D T+ Y R +LAS+L GI+
Sbjct: 10 LDRNPANFQPLTPLTFLARAAAVFPERVAIVHGDLRRTYRDFYARSRRLASALEKAGIDR 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VSV+ N PAM E H+ VPM+GA+ NT+NTRLDA ++ L H+E++ + VD S
Sbjct: 70 GDTVSVMLANTPAMLECHYGVPMTGAVLNTLNTRLDAAILAFTLDHAEARALIVDREFSG 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ E ++L +KT L++ DD + P R+ D YE+ + GDP + W
Sbjct: 130 VIREALAL----AKTKPLIIDYDD---PVYTGPGERLGSID----YEDFILSGDPNYDWK 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + D + LNYT GTT PKGVV ++ +++A+ +++ + + V LWTLPMFH N
Sbjct: 179 PPRDEWDAISLNYTSGTTGDPKGVVYHHRGAYLLALGNVLTGNMGQHPVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLD 301
GW F W +V T+VCLR+ A ++ L+ +HGVTH+CGAPIV++ L +S E K L
Sbjct: 239 GWCFPWSLSVAAGTHVCLRQVRAGHMYELMAEHGVTHLCGAPIVMSTLLGASESEKKPLS 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R TA +PPP VL ++ GF V+H YG TE G W+ W++L +A +
Sbjct: 299 VTARFFTAAAPPPQAVLAAMKAAGFEVTHLYGLTETYGPAAVNEWQEAWDELDDAGQAQM 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L +D++DPET V RDG T GE++ RG +M GYLK+P A+ G
Sbjct: 359 KARQGVRYQVLDAIDVIDPETMQPVPRDGATMGEVMFRGNIVMKGYLKNPSASENAFHGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G+MHPDGY+++KDRSKD+IISGGENISS E+E VL+ HP V+ AAVV PD
Sbjct: 419 WFHSGDLGVMHPDGYIQLKDRSKDIIISGGENISSIEVEDVLFKHPKVSAAAVVAAPDDK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK G ++ T ++I + R + + P+ +VF ELPKT+TGK++K
Sbjct: 479 WGETPCAFVELKAGAEA-----TADELIAWSRTHLAHFKCPRHIVFC-ELPKTSTGKIRK 532
Query: 542 YVLGDIANSM 551
YVL + A M
Sbjct: 533 YVLRERAREM 542
>gi|121606172|ref|YP_983501.1| AMP-dependent synthetase and ligase [Polaromonas naphthalenivorans
CJ2]
gi|120595141|gb|ABM38580.1| AMP-dependent synthetase and ligase [Polaromonas naphthalenivorans
CJ2]
Length = 546
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/551 (44%), Positives = 346/551 (62%), Gaps = 19/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ N AN L+P+ F+ER+A + S+I+ DT +TW+QTY RC +LAS+L+ G+
Sbjct: 10 LERNRANHTALSPISFLERSARVYPERVSLIHGDTRFTWAQTYARCRRLASALAQRGVRV 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PN P M+E HF VPM GA+ NT+NTRLDA I+ +L H E+K++ D S
Sbjct: 70 GDTVAAMLPNTPPMFEAHFGVPMLGAVLNTLNTRLDAEAIAFMLDHGEAKVLLTDREFSP 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + L K P+ ++I D + + + YE L GD + W
Sbjct: 130 IIERALPLM----KQPRPLVIDVDDPLHEGGALLGEL-------DYEAFLQTGDEAYEWA 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + + LNYT GTT PKGVV ++ ++ AV +++ W +P+ SV LWTLPMFH N
Sbjct: 179 LPSDEWNAIALNYTSGTTGNPKGVVTHHRGAYLNAVSNVVTWEMPRHSVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W A+ +VCLRK D +F+LIR+H VTH+CGAPIV LL ++P+ + +
Sbjct: 239 GWCFPWTLALQAGVSVCLRKVDPALIFSLIREHRVTHLCGAPIVYGLLINAPQVLRAGIS 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
P+ L AG+ PPA ++ E +G ++H YG TE+ G CA + W+KLP ERA+L
Sbjct: 299 HPIAGLIAGAAPPAAIIEGCERIGIDITHVYGLTEVYGPAAVCAKQAGWDKLPIGERAAL 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGV + ++DPET V DG+T GEI RG +M GYLK+P+AT + G
Sbjct: 359 NARQGVAYPMQQAIAVLDPETMRPVPADGETMGEIFFRGNLVMKGYLKNPQATEEAFAGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ ++HPDGY++IKDRSKDVIISGGENISS E+E VLY HP V AAVV +PD
Sbjct: 419 WFHTGDLAVLHPDGYVKIKDRSKDVIISGGENISSLEVEEVLYRHPAVLVAAVVAKPDDK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCA++ L G TE +II++CR+++ R+ VPK V+F LPKT+TGK+QK
Sbjct: 479 WGEVPCAYLEL-----CDGATVTEAEIIEHCRSQLARFKVPKQVLF-GTLPKTSTGKIQK 532
Query: 542 YVLGDIANSMS 552
+VL + S S
Sbjct: 533 FVLREQMRSAS 543
>gi|381197129|ref|ZP_09904470.1| acyl-CoA synthetase [Acinetobacter lwoffii WJ10621]
Length = 547
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/552 (44%), Positives = 346/552 (62%), Gaps = 20/552 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L PAN L+PL ++ERAA +II+ +W +TY RC Q AS L GI
Sbjct: 6 DELPRTPANFVALSPLRYLERAAYIYPHQDAIIHGHRHISWRETYLRCRQFASQLQKLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L H+E+K++ VD
Sbjct: 66 TKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLDHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSS-SSPPPRIPPADFVDTYENMLAKGDPQF 180
+S+ E ++L V+ DD E + ++P +I YE+ L +GD F
Sbjct: 126 ASVAQEALALV----GRDIFVIDVDDAEYENCFAAPIGQI-------EYEDWLTEGDENF 174
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
W P+ + D + LNYT GTT PKGVV ++ +I A ++I + ++ LWTLP+F
Sbjct: 175 EWHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYINAASNIIACGMTPRATYLWTLPLF 234
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGW F W A G TN+CLRK D +F LI +H V + CGAPIVL++L ++PE +++
Sbjct: 235 HCNGWCFAWTMAANGGTNICLRKIDPELIFKLITEHKVDYFCGAPIVLSMLINTPEEQRI 294
Query: 301 --DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
+ V ++ AG+ PPA ++ +G V+H YG TE G + CA + W+ L +E+
Sbjct: 295 HFEHRVEVMVAGAAPPAAIIEGMRHIGINVTHVYGLTETYGPSALCASQAGWSDLSIQEQ 354
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A L +RQGV + ++DP+T V DGQT GEI+ RG +M GYLK+PEAT++
Sbjct: 355 AQLHSRQGVPYPLQDGMKVLDPDTMQPVPHDGQTMGEIMFRGNIVMKGYLKNPEATAEAF 414
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
G ++TGD+ + PDGY +I DRSKDVIISGGENISS E+E +LY HP + AAVV +P
Sbjct: 415 TGGWFHTGDLAVCQPDGYAKITDRSKDVIISGGENISSLEVEEILYQHPAILTAAVVAKP 474
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
DP WQE+PCAF+ LK G + TT ++II++C+ + R+ VPK VV I E+PKT+TGK
Sbjct: 475 DPRWQEVPCAFIELKAGKE-----TTPEEIIEFCKQHLARFKVPKDVV-ITEIPKTSTGK 528
Query: 539 VQKYVLGDIANS 550
+QK+VL D A
Sbjct: 529 LQKFVLRDWAKE 540
>gi|220922067|ref|YP_002497368.1| AMP-dependent synthetase and ligase [Methylobacterium nodulans ORS
2060]
gi|219946673|gb|ACL57065.1| AMP-dependent synthetase and ligase [Methylobacterium nodulans ORS
2060]
Length = 543
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/550 (44%), Positives = 338/550 (61%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PLTPL F+ERAAT D +II+ ++ Y R +LAS+L++ GI
Sbjct: 11 LDRNPANFQPLTPLSFLERAATVFPDHVAIIHGSLRRSYRDLYARTRRLASALAARGITR 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ N PAM E H+ VPM+GA+ NT+NTRLD ++ L H E+K++ D +
Sbjct: 71 GDTVAVMLANTPAMIECHYGVPMTGAVLNTLNTRLDPAVLAFCLDHGEAKVLITDREFAR 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ ++ +K LV+ DD E + R+ + YE LA GDP +W
Sbjct: 131 TIKPALA----QAKVKPLVIDYDDPEFTGEGE---RLGTVE----YEEFLASGDPDHAWA 179
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + D + LNYT GTT PKGVV ++ ++AV +++ + K V LWTLPMFH N
Sbjct: 180 MPRDEWDAISLNYTSGTTGDPKGVVYHHRGAALLAVGNVVTGALGKHPVYLWTLPMFHCN 239
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLD 301
GW F W +VV T+VCLR+ A ++ I H VTH+CGAPIV+ LL + +PE + L
Sbjct: 240 GWCFPWTLSVVAGTHVCLRQVRAKAMYDAIADHRVTHLCGAPIVMQLLLNAPAPERRSLP 299
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V TA +PPP VL GF V+H YG TE G V W W+ L E+A+
Sbjct: 300 HRVSFFTAAAPPPEAVLAGMAEAGFDVTHLYGLTETYGPAVVNEWHADWDALTKPEQAAR 359
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L +D++DPET V DGQT GE++ RG +M GYLK+P+AT + + G
Sbjct: 360 KARQGVRYPPLEALDVLDPETMQPVPADGQTLGEVMFRGNVVMRGYLKNPKATEEAFRGG 419
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G+ HPDGY+++KDRSKD+IISGGENISS E+E L+ HP V AAVV +PD
Sbjct: 420 WFHSGDLGVKHPDGYIQLKDRSKDIIISGGENISSIEVEEALFKHPAVAAAAVVAKPDEK 479
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK G M + +++I +CR + Y VPK VVF ELPKT+TGK+QK
Sbjct: 480 WGETPCAFVELK-----GSEMVSAEELIGWCRQSLAGYKVPKHVVFT-ELPKTSTGKIQK 533
Query: 542 YVLGDIANSM 551
++L ++A ++
Sbjct: 534 FILREMAKAL 543
>gi|83592993|ref|YP_426745.1| acyl-CoA synthetase [Rhodospirillum rubrum ATCC 11170]
gi|386349724|ref|YP_006047972.1| acyl-CoA synthetase [Rhodospirillum rubrum F11]
gi|83575907|gb|ABC22458.1| AMP-dependent synthetase and ligase [Rhodospirillum rubrum ATCC
11170]
gi|346718160|gb|AEO48175.1| acyl-CoA synthetase [Rhodospirillum rubrum F11]
Length = 542
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 239/543 (44%), Positives = 336/543 (61%), Gaps = 19/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PLTPL F++RAA D PS+++ YTW++T +R +LAS+L + GI P
Sbjct: 9 LDRTPANHVPLTPLAFLDRAAQVFPDRPSLVHGKRRYTWAETAQRARRLASALRARGIGP 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V+V+ N P +YE HF VPM+GA+ N +N RL+A I+ IL+H E++++ D S
Sbjct: 69 EDTVAVMGANTPELYEAHFGVPMAGAVLNALNVRLNAEEIAFILEHGEARVLLTDTEFSP 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + ++ P V+ D E + + YE LA+GDP W
Sbjct: 129 IIADALARI----DRPITVIDIVDPEYDGPGACVGEM-------EYEAFLAEGDPTADWR 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + + LNYT GTT PKGVV ++ ++ A+ ++I W +P +V LWTLPMFH N
Sbjct: 178 WPADEWESITLNYTSGTTGNPKGVVYHHRGAYLNALSNIITWGMPHHAVYLWTLPMFHCN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAKQ-LD 301
GW F W A TNVCLR+ A +F I + V+H CGAPIVL+ L+++ PE ++ D
Sbjct: 238 GWCFPWTMAANAGTNVCLRRVTAAGIFQAIAEEKVSHFCGAPIVLSFLINARPEERRSFD 297
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V ++TA +PPPA VL + + GF V+H YG TE G CAWK WN LP E+A L
Sbjct: 298 HQVNVMTAAAPPPASVLEKMQREGFCVTHVYGLTETYGPATVCAWKEPWNDLPMDEQARL 357
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR + + + DPET +V DG++ GE+ RG M GYLK+PEAT++ + G
Sbjct: 358 KSRQGVRYLVQEGLMVGDPETMEAVPADGESMGEVFFRGNITMKGYLKNPEATAEAFRGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++HPDGYL++KDRSKD+IISGGENISS E+E VL+ HP V AAVV +PD
Sbjct: 418 WFHTGDLGVLHPDGYLQLKDRSKDIIISGGENISSIEVEGVLHRHPDVVAAAVVAKPDEK 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P A+V L+ G TE +++ +CR + Y P+ V + LPKT+TGK+QK
Sbjct: 478 WGETPKAYVELRDGA-----TVTEDELVAFCRLHLAHYKCPRDVE-VGPLPKTSTGKIQK 531
Query: 542 YVL 544
+VL
Sbjct: 532 FVL 534
>gi|390576580|ref|ZP_10256639.1| acyl-CoA synthetase [Burkholderia terrae BS001]
gi|389931483|gb|EIM93552.1| acyl-CoA synthetase [Burkholderia terrae BS001]
Length = 550
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/543 (44%), Positives = 329/543 (60%), Gaps = 20/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ FI RAA D ++++ D TW +TY R +LAS+L +
Sbjct: 9 LARRDANHVPLTPIDFIARAAEVYGDRLAVVHGDVRRTWRETYERARRLASALQRASVAR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIP M E HF VPM+GA+ NT+NTRLDA +I +L+H E+K + VD
Sbjct: 69 GETVAALLPNIPPMIEAHFGVPMAGAVLNTLNTRLDAASILYMLRHGEAKALIVDSEYGE 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L L FP +++ ++D + + P YE L GDPQF+W
Sbjct: 129 LALRAAREFP----QLRIISVSDAQPADTRHFPN--------ATDYEAFLQAGDPQFAWT 176
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLP+FH N
Sbjct: 177 PPADEWDAIALNYTSGTTGEPKGVVYHHRGAYLNALSNILEWDMPKHAVYLWTLPLFHCN 236
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W A NVCLRKFD VF LIR+ +TH CGAPIV + L+++P + +
Sbjct: 237 GWCFPWTVAARAGVNVCLRKFDPKLVFDLIRRERITHYCGAPIVQSALANAPAEWRDGIA 296
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V + AG+ P V+ R +S+GF ++H YG TE+ G CA + W+ L ERA L
Sbjct: 297 HRVSTMVAGAAPSPAVIARMKSIGFDLTHVYGLTEVYGPASVCAKQDAWDALDDDERARL 356
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGVR VD++DP+T V RDG+T GE++ RG M GYLK+ AT + G
Sbjct: 357 NARQGVRYHLQAAVDVLDPDTLEPVPRDGETIGELMFRGNICMKGYLKNERATEAAFRGG 416
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++ DGY+ IKDRSKD+IISGGEN+SS EIE LY HP V+ AAVV PD
Sbjct: 417 WFHTGDLGVITADGYVRIKDRSKDIIISGGENVSSIEIEDALYRHPAVSVAAVVAMPDAK 476
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK G D+ + ++II +CR + + +PK VF ELPKT+TGK+QK
Sbjct: 477 WGEVPCAFVELKDGADA-----SAEEIISHCRQLLAGFKLPKA-VFFGELPKTSTGKIQK 530
Query: 542 YVL 544
+ L
Sbjct: 531 FEL 533
>gi|406039526|ref|ZP_11046881.1| acyl-CoA synthetase [Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 546
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/551 (44%), Positives = 342/551 (62%), Gaps = 18/551 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L AN L+PL ++ERAA D +II+ +W QTY+RC Q A L GI
Sbjct: 5 DELPKTAANFVALSPLRYLERAAYIYPDQAAIIHGARQLSWKQTYQRCCQFAHQLQKLGI 64
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PNIPAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+ESK++ VD
Sbjct: 65 QKNDTVSVLLPNIPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAESKVLLVDPEF 124
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
+ + E ++L S+ ++ + D + S S+P +I YE L++GD F
Sbjct: 125 AHVAREALALI---SQQIYVIDVADLEYESELSNPIGQI-------EYETWLSQGDANFE 174
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + D + LNYT GTT PKGVV ++ ++ A ++I + ++ LWTLP+FH
Sbjct: 175 WSLPNDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNIIACGMTPRASYLWTLPLFH 234
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A G TNVCLRK D VF LI KH V + CGAPIVL++L ++P+ KQ
Sbjct: 235 CNGWCFAWTIAANGGTNVCLRKVDPELVFELIAKHKVDYFCGAPIVLSMLINTPKDKQVH 294
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
D V ++ AG+ PPA ++ +G V+H YG TE G + CA + WN L +E+A
Sbjct: 295 FDHRVEVMVAGAAPPAAIIEGMRHIGINVTHVYGLTETYGPSALCASQAGWNDLSIQEQA 354
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L +RQGV + ++DPET V DGQT GEI+ RG +M GYLK+P+AT +
Sbjct: 355 QLHSRQGVPYPLQDSMRVLDPETMQPVPADGQTLGEIMFRGNIVMKGYLKNPKATEEAFA 414
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+ + DGY +I DR+KDVIISGGENISS E+E VLY HP V AAVV +PD
Sbjct: 415 GGWFHSGDLAVCQADGYAKITDRAKDVIISGGENISSLEVEEVLYQHPAVMTAAVVAKPD 474
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
P WQE+PCAF+ LK G+ + ++I +C+ ++ R+ VPK +V I E+PKT+TGK+
Sbjct: 475 PRWQEVPCAFIELKQ-----GISVSTDELIAHCQQQLARFKVPKDIV-ITEIPKTSTGKL 528
Query: 540 QKYVLGDIANS 550
QK++L D A
Sbjct: 529 QKFILRDWAKQ 539
>gi|404394760|ref|ZP_10986563.1| hypothetical protein HMPREF0989_02975 [Ralstonia sp. 5_2_56FAA]
gi|348613825|gb|EGY63394.1| hypothetical protein HMPREF0989_02975 [Ralstonia sp. 5_2_56FAA]
Length = 562
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/548 (45%), Positives = 332/548 (60%), Gaps = 31/548 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PLTP+ F+ RAA D +I++ W TY R +LAS+LS G+
Sbjct: 27 LARNAANFVPLTPIEFLARAADVYGDRLAIVHGPVRQNWRDTYERARRLASALSLAGVGR 86
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----H 119
G V+ + PN PAM E HF VPM+G + N +N RLDA + +L+H E++++ D
Sbjct: 87 GDTVAALLPNTPAMVEAHFGVPMAGGVLNALNIRLDAANLVFMLRHGEARVLLADTEFAD 146
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT-YENMLAKGDP 178
L+ + LE+ P L +I + + + P F DT YE LA GDP
Sbjct: 147 LARQMALEI----------PGLKVIAVNDALGPQAEP--------FGDTDYETFLASGDP 188
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
++W P + D + LNYT GTT PKGVV ++ I AV ++++W +PK V LWTLP
Sbjct: 189 HYAWQLPADEWDAIALNYTSGTTGDPKGVVYHHRGAAINAVSNILEWDLPKHPVYLWTLP 248
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA- 297
MFH NGW F W A NVCLRKF+ VF L+R GVTH C APIV L ++P +
Sbjct: 249 MFHCNGWCFPWTIAARAGVNVCLRKFEPKLVFDLMRDEGVTHYCAAPIVHTALVNAPPSW 308
Query: 298 -KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
+ L PVR + AG+PPPA VL + E++GF ++H YG TE+ G CA + +W LP
Sbjct: 309 REGLRGPVRGMVAGAPPPAAVLAQMEAMGFELTHVYGLTEVYGPAAVCAEQDEWRTLPEH 368
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
+RA++KARQGVR ++V +++PET V DG+T GEI+ RG M GYLK+ +AT +
Sbjct: 369 DRATMKARQGVRYHLQSQVAVLNPETMQPVPADGETIGEIMFRGNICMKGYLKNEKATRE 428
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
G ++TGD+G+ PDGY++IKDRSKD+IISGGENISS E+E LY HP V AAVV
Sbjct: 429 AFAGGWFHTGDLGVCMPDGYIKIKDRSKDIIISGGENISSVEVEDALYRHPAVLAAAVVA 488
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
+PD W E PCAFV LK G + T +D+I +C+ + + VPK VF LPKT+T
Sbjct: 489 QPDAKWGETPCAFVELKDGATA-----TAEDLIAHCKTLLAGFKVPKA-VFFGPLPKTST 542
Query: 537 GKVQKYVL 544
GK+QKY L
Sbjct: 543 GKIQKYEL 550
>gi|389704863|ref|ZP_10185967.1| acyl-CoA synthetase [Acinetobacter sp. HA]
gi|388611107|gb|EIM40216.1| acyl-CoA synthetase [Acinetobacter sp. HA]
Length = 546
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 244/553 (44%), Positives = 345/553 (62%), Gaps = 19/553 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L PAN L+PL ++ERAA + +II+ TW TY+RC + A L G+
Sbjct: 6 DELPRTPANFVALSPLRYLERAAYIYPNQNAIIHGQREITWRDTYQRCRRFAHQLQQLGV 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
+SV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+T++ +L+H+E+K++ VD
Sbjct: 66 GKNDTISVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTLAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
+++ E ++L K ++ D+ ++ +I YE+ LA+GD F
Sbjct: 126 TAVAQEALALI----KQDIYIIDVADENYEEAADRIGQI-------EYESWLAQGDANFE 174
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P+ + D + LNYT GTT PKGVV ++ +I A ++I + ++ LWTLP+FH
Sbjct: 175 WHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYINAASNIIACGMMPRATYLWTLPLFH 234
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK--Q 299
NGW F W A G TNVCLRK D +F LI H V + CGAPIVL++L ++PE K +
Sbjct: 235 CNGWCFAWTMAANGGTNVCLRKVDPELIFQLIATHKVDYFCGAPIVLSMLINTPEEKRTK 294
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
D V ++ AG+ PPA ++ ++G V+H YG TE G + CA + W+ L +E+A
Sbjct: 295 FDHRVEVMVAGAAPPAAIIEGMRNIGINVTHVYGLTETYGPSALCASQAGWSDLTIQEQA 354
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L +RQGV + ++DPET V DG+T GEI+ RG +M GYLK+PEAT++
Sbjct: 355 QLHSRQGVPYPLQDGMKVLDPETMQEVPHDGKTLGEIMFRGNIVMKGYLKNPEATAEAFA 414
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+ + PDGY +I DRSKDVIISGGENISS E+E VLY HP + AAVV +PD
Sbjct: 415 GGWFHTGDLAVCQPDGYAKITDRSKDVIISGGENISSLEVEEVLYQHPAILTAAVVAKPD 474
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
P WQE+PCAF+ LK G + T ++II++CR + R+ VPK VV I E+PKT+TGK+
Sbjct: 475 PRWQEVPCAFIELKQGFE-----VTPEEIIEFCREHLARFKVPKDVV-ITEIPKTSTGKL 528
Query: 540 QKYVLGDIANSMS 552
QK+VL + A S
Sbjct: 529 QKFVLREWAKERS 541
>gi|359407767|ref|ZP_09200241.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [SAR116
cluster alpha proteobacterium HIMB100]
gi|356677130|gb|EHI49477.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [SAR116
cluster alpha proteobacterium HIMB100]
Length = 546
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/543 (42%), Positives = 335/543 (61%), Gaps = 16/543 (2%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
++ PAN PLTPL F+ R A+ D ++IY + Y+W+Q Y R ++LAS++ G+ P
Sbjct: 13 MERRPANYVPLTPLSFLPRVASIYPDKDAVIYGNRRYSWAQVYERSVRLASAIIKAGVKP 72
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+++APNIP M+E HF V M+GA+ NT+NTRLD TI+ IL H++++L+ D
Sbjct: 73 GEVVTIMAPNIPEMFEAHFGVAMAGAVLNTLNTRLDTDTIAYILDHADTRLLITDAAFGG 132
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ +L +K ++ I D + + S+ R+ D YE L + DP + W
Sbjct: 133 AMK--AALAASDNKQMTIIDIVDGQ--AEESANGVRLGTCD----YETFLQEADPDYDWQ 184
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + M LNYT GT+ PKGVV ++ +++A+ ++ W +P L+ +P+FH N
Sbjct: 185 MPTDEWQAMCLNYTSGTSGRPKGVVYHHRGAYLMAMGTIPVWNMPMHPTYLYVVPLFHCN 244
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQLD 301
GW W A++ T VC RK A ++ L+ H VTH GAPIVL++L ++PE + +
Sbjct: 245 GWGHAWMMAILAGTTVCCRKISAEEIYPLLATHKVTHFGGAPIVLSMLVNAPEDVIQTPE 304
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V I+TAG+PPPA +L R E LGF V+ YG TE G CAW W L E+A++
Sbjct: 305 HTVNIMTAGAPPPAAILERIERLGFNVTQVYGLTETYGHVTHCAWNDDWEDLDFSEKAAI 364
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KA+QGVR ++++D +TG V DGQ+ GE++ R +M GY K+P+AT + + DG
Sbjct: 365 KAQQGVRFTHTEALEVLDQQTGAPVPADGQSLGEVMFRSNCVMKGYHKNPDATEEALADG 424
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GD+ + HP+GY+EIKDR KD+IISGGENISS E+ESVLY V AAVV +PD
Sbjct: 425 YFKSGDLAVRHPNGYIEIKDRLKDIIISGGENISSVEVESVLYRFSGVAYAAVVAKPDEK 484
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF+ +K G + TE D+I +CR + + PK VVF E+PKT+TGK+QK
Sbjct: 485 WGETPCAFLEMKPGESA-----TEADVITFCREHLAGFKCPKQVVFT-EIPKTSTGKLQK 538
Query: 542 YVL 544
++L
Sbjct: 539 FML 541
>gi|312114411|ref|YP_004012007.1| AMP-dependent synthetase and ligase [Rhodomicrobium vannielii ATCC
17100]
gi|311219540|gb|ADP70908.1| AMP-dependent synthetase and ligase [Rhodomicrobium vannielii ATCC
17100]
Length = 540
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/550 (42%), Positives = 344/550 (62%), Gaps = 19/550 (3%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L PAN PLTPLGF+ RAA + P++++ TYT+++ Y R +LAS+LS GI
Sbjct: 8 NLDKTPANHQPLTPLGFLARAARVYPNHPAVVHGAKTYTYAEFYDRSRRLASALSKLGIG 67
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
VSV+ PN+PAM + + VPM+GA+ ++INTRLDA I+ +L H+E+K++ D +
Sbjct: 68 KNDTVSVMLPNVPAMLDAKYGVPMAGAVLHSINTRLDAANIAFMLDHAETKVLITDTEYA 127
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ E + L S+ +++ D E + R+ + YE+ +A GDP+F+W
Sbjct: 128 KVVAEALKL----SEHKPVIIDYADTEFPGLGA---RLSDVE----YEDFIAGGDPEFAW 176
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P + D + LNYT GTT PKGVV ++ ++ ++ + + + K LWTLPMFH
Sbjct: 177 KMPDDEWDAISLNYTSGTTGNPKGVVYHHRGAYLTSLGNTLAGQIGKHPNYLWTLPMFHC 236
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQL 300
+GW F W +VG T VCLR ++A + ++ +TH+CGAPIV++ + ++P ++L
Sbjct: 237 DGWCFGWTIPLVGGTQVCLRYVRPDAIWASLYENEITHLCGAPIVMSTILNAPADAKRKL 296
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
+ V+ LTA +PPP VL GF V+H YG TE G +V WK +W+ L +A
Sbjct: 297 KQKVQFLTAAAPPPEAVLAEMREAGFNVTHVYGLTETYGPSVVNEWKGEWDALDGGAQAQ 356
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
KARQGVR + L ++ ++DP T V DG+T GE++ RG +M GYLK+ +AT +
Sbjct: 357 KKARQGVRYVPLEDLSVIDPLTMQHVPADGETLGEVMFRGNVVMKGYLKNKDATDDALAG 416
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +++GD+G+MHPDGY+++KDRSKD+IISGGENISS E+E VL+ HP V A+VV + D
Sbjct: 417 GWFHSGDLGVMHPDGYIQLKDRSKDIIISGGENISSIEVEDVLFKHPAVQAASVVAKHDE 476
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E PCAF+ LK G T ++II +CR + Y P+ VVF +ELPKT+TGK+Q
Sbjct: 477 KWGETPCAFIELKPGA-----TVTAEEIIAWCRQHLAAYKCPRHVVF-NELPKTSTGKIQ 530
Query: 541 KYVLGDIANS 550
KY+L ++A S
Sbjct: 531 KYILREMAKS 540
>gi|241661643|ref|YP_002980003.1| acyl-CoA synthetase [Ralstonia pickettii 12D]
gi|240863670|gb|ACS61331.1| AMP-dependent synthetase and ligase [Ralstonia pickettii 12D]
Length = 544
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/548 (45%), Positives = 332/548 (60%), Gaps = 31/548 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PLTP+ F+ RAA D +I++ W TY R +LAS+LS G+
Sbjct: 9 LARNAANFVPLTPIEFLARAADVYGDRLAIVHGPVRQNWRDTYERARRLASALSLAGVGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----H 119
G V+ + PN PAM E HF VPM+G + N +N RLDA + +L+H E++++ D
Sbjct: 69 GDTVAALLPNTPAMVEAHFGVPMAGGVLNALNIRLDAANLVFMLRHGEARVLLADTEFAE 128
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT-YENMLAKGDP 178
L+ + LE+ P L +I + + + P F DT YE+ LA GDP
Sbjct: 129 LARQMALEI----------PGLKVIAVNDALGPQAEP--------FGDTDYESFLASGDP 170
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
+ W P + D + LNYT GTT PKGVV ++ I AV ++++W +PK V LWTLP
Sbjct: 171 HYDWQMPADEWDAIALNYTSGTTGDPKGVVYHHRGAAINAVSNILEWDLPKHPVYLWTLP 230
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA- 297
MFH NGW F W A NVCLRKF+ VF L+R GVTH C APIV L ++P +
Sbjct: 231 MFHCNGWCFPWTIAARAGVNVCLRKFEPKLVFDLMRDEGVTHYCAAPIVHTALVNAPPSW 290
Query: 298 -KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
+ L PVR + AG+PPPA VL + E++GF ++H YG TE+ G CA + +W LP
Sbjct: 291 REGLRGPVRGMVAGAPPPAAVLAQMEAMGFELTHVYGLTEVYGPAAVCAEQDEWRTLPEH 350
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
+RA++KARQGVR ++V +++PET V DG+T GEI+ RG M GYLK+ +AT +
Sbjct: 351 DRATMKARQGVRYHLQSQVAVLNPETMQPVPADGETIGEIMFRGNICMKGYLKNEKATRE 410
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
G ++TGD+G+ PDGY++IKDRSKD+IISGGENISS E+E LY HP V AAVV
Sbjct: 411 AFAGGWFHTGDLGVCMPDGYIKIKDRSKDIIISGGENISSVEVEDALYRHPAVLAAAVVA 470
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
+PD W E PCAFV LK G + T +D+I +C+ + + VPK VF LPKT+T
Sbjct: 471 QPDAKWGETPCAFVELKDGATA-----TAEDLIAHCKTLLAGFKVPKA-VFFGPLPKTST 524
Query: 537 GKVQKYVL 544
GK+QKY L
Sbjct: 525 GKIQKYEL 532
>gi|420247111|ref|ZP_14750529.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. BT03]
gi|398072425|gb|EJL63644.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. BT03]
Length = 550
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/543 (44%), Positives = 329/543 (60%), Gaps = 20/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ FI RAA D ++++ D TW +TY R +LAS+L G+
Sbjct: 9 LARREANHVPLTPIDFIARAAEVYGDRLAVVHGDVRRTWRETYERARRLASALQRAGVAR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIP M E HF VPM+GA+ NT+NTRLDA +I +L+H E+K + VD
Sbjct: 69 GETVAALLPNIPPMIEAHFGVPMAGAVLNTLNTRLDAASILYMLRHGEAKALIVDSEYGE 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L L FP +++ ++D + + P YE L GD QF+W
Sbjct: 129 LGLRAAREFP----QLRIISVSDAQPADTRHFPN--------ATDYEAFLQAGDSQFAWT 176
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLP+FH N
Sbjct: 177 PPADEWDAIALNYTSGTTGEPKGVVYHHRGAYLNALSNILEWDMPKHAVYLWTLPLFHCN 236
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W A NVCLRKFD VF LIR+ +TH CGAPIV + L+++P + +
Sbjct: 237 GWCFPWTVAARAGVNVCLRKFDPKLVFDLIRRERITHYCGAPIVQSALANAPAEWRDGIA 296
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V + AG+ P V+ R +S+GF ++H YG TE+ G CA + W+ L ERA L
Sbjct: 297 HRVSTMVAGAAPSPAVIARMKSIGFDLTHVYGLTEVYGPASVCAKQDAWDALDDDERARL 356
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGVR VD++DP+T V RDG+T GE++ RG M GYLK+ AT + G
Sbjct: 357 NARQGVRYHLQAAVDVLDPDTLEPVPRDGETIGELMFRGNICMKGYLKNERATEAAFRGG 416
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++ DGY+ IKDRSKD+IISGGENISS EIE LY HP V+ AAVV PD
Sbjct: 417 WFHTGDLGVITADGYVRIKDRSKDIIISGGENISSIEIEDALYRHPAVSVAAVVAMPDAK 476
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK G D+ + ++II +CR + + +PK VF ELPKT+TGK+QK
Sbjct: 477 WGEVPCAFVELKDGADA-----SAEEIISHCRQLLAGFKLPKA-VFFGELPKTSTGKIQK 530
Query: 542 YVL 544
+ L
Sbjct: 531 FEL 533
>gi|154246404|ref|YP_001417362.1| AMP-dependent synthetase and ligase [Xanthobacter autotrophicus
Py2]
gi|154160489|gb|ABS67705.1| AMP-dependent synthetase and ligase [Xanthobacter autotrophicus
Py2]
Length = 542
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/551 (43%), Positives = 342/551 (62%), Gaps = 19/551 (3%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L NPAN PLTPLGF+ERAA D +II+ + Y R +LAS+L+ G+
Sbjct: 9 HLDRNPANFQPLTPLGFLERAAGVFPDHTAIIHGALRRNYRDFYARSRRLASALAKLGVG 68
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G V+V+ PN PAM E H+ VPM+GA+ N++NTRLDA ++ L H E+K++ D S
Sbjct: 69 KGDTVAVMLPNAPAMLEAHYGVPMTGAVLNSLNTRLDAAILAFTLDHGEAKVLITDREFS 128
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ +++ ++ P +V+ DD E + RI + YE+ LA GD F+W
Sbjct: 129 PVMKAALAMA---TRKP-VVIDYDDPEFTGKGE---RIGTIE----YEDFLATGDADFAW 177
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P + D + LNYT GTT PKGVV ++ ++AV +++ + K V LWTLPMFH
Sbjct: 178 KTPDDEWDAIALNYTSGTTGDPKGVVYHHRGAHLLAVGNVVTCSLGKHPVYLWTLPMFHC 237
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--L 300
NGW F W + T+VCLR+ A +F I + VTHMCGAPIV++ L ++P+A + L
Sbjct: 238 NGWCFPWSITLAAGTHVCLRQVRAKPIFDAIADYKVTHMCGAPIVMSTLLNTPDADKRPL 297
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
V +TA +PPP VL + GF V H YG TE+ G +V W +W+ LPA+ERA
Sbjct: 298 PHKVEFITAAAPPPEAVLAAMQEAGFNVVHVYGLTEVYGPSVVNEWHAEWDALPAQERAI 357
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
KARQGVR L +D++DP+T + V DG+T GE++ RG +M GYLK+P AT
Sbjct: 358 KKARQGVRYGALEALDVLDPDTMVPVPADGETLGEVMFRGNVVMKGYLKNPTATDAAFAG 417
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +++GD+G+ HPDGY+++KDRSKD+IISGGENISS E+E LY HP V+ AAVV +PD
Sbjct: 418 GWFHSGDLGVKHPDGYIQLKDRSKDIIISGGENISSIEVEDALYKHPAVSAAAVVAKPDE 477
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E P AFV L+ G + T +D+I +CR + Y P+ +VF +E+PKT+TGK+Q
Sbjct: 478 KWGETPVAFVELREGASA-----TAEDLIAHCRTHLAAYKCPRHIVF-EEIPKTSTGKIQ 531
Query: 541 KYVLGDIANSM 551
K+ L ++A +
Sbjct: 532 KFRLREMAKEV 542
>gi|187927134|ref|YP_001897621.1| acyl-CoA synthetase [Ralstonia pickettii 12J]
gi|309780163|ref|ZP_07674914.1| AMP-binding protein [Ralstonia sp. 5_7_47FAA]
gi|187724024|gb|ACD25189.1| AMP-dependent synthetase and ligase [Ralstonia pickettii 12J]
gi|308920866|gb|EFP66512.1| AMP-binding protein [Ralstonia sp. 5_7_47FAA]
Length = 544
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/548 (45%), Positives = 332/548 (60%), Gaps = 31/548 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PLTP+ F+ RAA D +I++ W TY R +LAS+LS G+
Sbjct: 9 LARNAANFVPLTPIEFLARAADVYGDRLAIVHGPVRQNWRDTYERARRLASALSLAGVGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----H 119
G V+ + PN PAM E HF VPM+G + N +N RLDA + +L+H E++++ D
Sbjct: 69 GDTVAALLPNTPAMVEAHFGVPMAGGVLNALNIRLDAANLVFMLRHGEARVLLADTEFAD 128
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT-YENMLAKGDP 178
L+ + LE+ P L +I + + + P F DT YE LA GDP
Sbjct: 129 LARQMALEI----------PGLKVIAVNDALGPQAEP--------FGDTDYETFLASGDP 170
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
++W P + D + LNYT GTT PKGVV ++ I AV ++++W +PK V LWTLP
Sbjct: 171 HYAWQLPADEWDAIALNYTSGTTGDPKGVVYHHRGAAINAVSNILEWDLPKHPVYLWTLP 230
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA- 297
MFH NGW F W A NVCLRKF+ VF L+R GVTH C APIV L ++P +
Sbjct: 231 MFHCNGWCFPWTIAARAGVNVCLRKFEPKLVFDLMRDEGVTHYCAAPIVHTALVNAPPSW 290
Query: 298 -KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
+ L PVR + AG+PPPA VL + E++GF ++H YG TE+ G CA + +W LP
Sbjct: 291 REGLRGPVRGMVAGAPPPAAVLAQMEAMGFELTHVYGLTEVYGPAAVCAEQDEWRTLPEH 350
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
+RA++KARQGVR ++V +++PET V DG+T GEI+ RG M GYLK+ +AT +
Sbjct: 351 DRATMKARQGVRYHLQSQVAVLNPETMQPVPADGETIGEIMFRGNICMKGYLKNEKATRE 410
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
G ++TGD+G+ PDGY++IKDRSKD+IISGGENISS E+E LY HP V AAVV
Sbjct: 411 AFAGGWFHTGDLGVCMPDGYIKIKDRSKDIIISGGENISSVEVEDALYRHPAVLAAAVVA 470
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
+PD W E PCAFV LK G + T +D+I +C+ + + VPK VF LPKT+T
Sbjct: 471 QPDAKWGETPCAFVELKDGATA-----TAEDLIAHCKTLLAGFKVPKA-VFFGPLPKTST 524
Query: 537 GKVQKYVL 544
GK+QKY L
Sbjct: 525 GKIQKYEL 532
>gi|347539968|ref|YP_004847393.1| acyl-CoA synthetase [Pseudogulbenkiania sp. NH8B]
gi|345643146|dbj|BAK76979.1| acyl-CoA synthetase [Pseudogulbenkiania sp. NH8B]
Length = 546
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 244/543 (44%), Positives = 337/543 (62%), Gaps = 20/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PL+PL F+ER+AT + + I+ D TW + Y+RC +LAS+L G+
Sbjct: 11 LDKGPANYVPLSPLTFLERSATVYPERIASIHGDWRMTWREVYQRCRRLASALQRRGVGA 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM+E HF VPM GA+ NT+NTRLDA +I+ +L+H E+K++ D
Sbjct: 71 GDTVAVMLPNIPAMFECHFGVPMCGAVLNTLNTRLDAESIAFMLRHGEAKVLITDREFCE 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ + ++L T LV+ DD S + D YE +L +GDP+F+W
Sbjct: 131 PVAKALALL----DTKPLVIDVDDHLFSGGD----LLGETD----YEALLREGDPEFAWT 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++ AV +L +W VP+ +V LWTLPMFH N
Sbjct: 179 LPGDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAVCNLFEWGVPRHAVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQLD 301
GW F W A TNV LR+ D +FA I++H VTH C APIV N++ + + K ++
Sbjct: 239 GWCFPWAMAANAGTNVFLRRVDPRQIFAQIKQHRVTHYCAAPIVHNMMINVADECGKDIE 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V L AG+ PPA V+ + LGF ++H YG TE G CA +P+W + ER
Sbjct: 299 HEVSCLVAGAAPPAAVIEGMQRLGFNITHVYGLTETYGPAGVCAKQPEWEGMTLAERTER 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
RQGVR + +++PET V DG+T GEI+ RG +M GYLK+P+A+++ G
Sbjct: 359 NGRQGVRYSMQEGMTVMNPETMQPVPADGETMGEIMFRGNLVMKGYLKNPDASAEAFGGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ ++ PDGY++IKDRSKD+IISGGENISS E+E VLY HP V AAVV +PD
Sbjct: 419 WFHTGDLAVLQPDGYVKIKDRSKDIIISGGENISSLEVEDVLYRHPAVMSAAVVAKPDTK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+ CAFV LK G TE++II YCRA + + PK VVF +PKT+TGK+QK
Sbjct: 479 WGEVTCAFVELKDGA-----TVTEREIIDYCRAHLAHFKAPKQVVF-GPIPKTSTGKIQK 532
Query: 542 YVL 544
++L
Sbjct: 533 FLL 535
>gi|297183599|gb|ADI19726.1| hypothetical protein [uncultured bacterium EB000_36F02]
Length = 542
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/547 (42%), Positives = 342/547 (62%), Gaps = 24/547 (4%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L N AN PL+PL F+ER + +I+Y +YTWS+ Y+RC++ AS+L G+
Sbjct: 7 NLDKNEANYIPLSPLSFLERTKNIYPNYEAIVYESRSYTWSEVYKRCVKFASALDKIGVK 66
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD---H 119
G VS++A N P ++E H+++PM GA+ N INTRLD++TIS IL HS++K++ VD H
Sbjct: 67 VGDTVSIMAFNTPEIFEAHYSIPMVGAVINAINTRLDSKTISYILDHSDAKVLIVDRQFH 126
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ S LE V + I D + +S +I + YE+ L GD
Sbjct: 127 EAISKALENVK---------NKIRIIDIDDKDIDTSSFKKIGDLE----YESFLNTGDEN 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
+ W +PK + + L YT GTT PKGVV ++ +++A S W +P + L+T+PM
Sbjct: 174 YKWKKPKDEWQAISLGYTSGTTGNPKGVVCHHRGSYLMATGSATAWNMPNKLNFLYTVPM 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--A 297
FH NGW +TW +++ +CLR D +F LI K+ VTH GAPIVLN+++++P+
Sbjct: 234 FHCNGWCYTWTMSMLHGRVICLRNIDVKKIFELIDKYDVTHFGGAPIVLNMIANTPKEHQ 293
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
K+L R V +LTAG+PPP+ + + ++LGF V H YG TE G + CAW +W L +
Sbjct: 294 KKLKRKVHVLTAGAPPPSIIFEKMQNLGFDVMHVYGLTETYGHILQCAWNDEWENLEQEK 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+ ++ARQGV L ++DPET + +DG+T GEI++RG +M GY KD EAT K
Sbjct: 354 QNEIRARQGVIYPNLEGAVVMDPETMKPLPKDGKTMGEIMIRGNVVMKGYYKDKEATEKS 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
MK G +++GD+ + +P+GY++I+DRSKD+IISGGENISS EIE+ + HP V+ AAVV +
Sbjct: 414 MKGGWFHSGDLAVTYPNGYIKIQDRSKDIIISGGENISSIEIENTIAKHPAVSLAAVVAK 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD W E PCAFV L G + TE++II++CR + + +PK+VVF LPKT+TG
Sbjct: 474 PDEKWGETPCAFVELIDGKKA-----TEEEIIKFCRETLAGFKLPKSVVF-SPLPKTSTG 527
Query: 538 KVQKYVL 544
K+QK+ L
Sbjct: 528 KIQKFEL 534
>gi|398892500|ref|ZP_10645586.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM55]
gi|398185369|gb|EJM72776.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM55]
Length = 550
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/548 (42%), Positives = 343/548 (62%), Gaps = 18/548 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PN AN PL+PL F++RAA D ++++ + YT+ Q ++R +LAS+L G+ P
Sbjct: 10 LAPNQANYVPLSPLSFLKRAAHIYPDRDAVVHGERRYTYRQLHQRARRLASALERVGVQP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+APN+P + E H+ VP +GA+ +IN RL+A+TI+ IL+HS +K++ D S+
Sbjct: 70 GDRVAVLAPNVPELLEAHYGVPGAGAVLVSINIRLEAKTIAFILRHSAAKVLICDREFSA 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ + ++ +T LV+ DD ++ + I D YE L +GDP S
Sbjct: 130 IARQALAAL----ETRPLVIDIDDVQVRDAE----LIGELD----YEAFLDQGDPMRSLS 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+++ + +NYT GTT PKGVV ++ ++ A + + + +SV LWTLPMFH N
Sbjct: 178 LPENEWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGALIFQLSSRSVYLWTLPMFHCN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLD 301
GWS TW + G T++CLRK A + A I KHGVTHM AP+V+++L + P ++ +
Sbjct: 238 GWSHTWAVTLSGGTHICLRKVQADLIHAAIAKHGVTHMSAAPVVMSMLIHAEEPCERRAN 297
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+PV ++T G+ PP+ V+ E+ GF ++H YG TE G + C W+P ++LP RA
Sbjct: 298 QPVAVITGGAAPPSAVIAAMEARGFNITHAYGMTESYGPSTLCLWQPGLDELPLEARAQF 357
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
+RQGV L + ++D +TG V DG + GE+V+RG ++M GYL +PE T DG
Sbjct: 358 MSRQGVAHPMLEDATVLDTDTGQPVPADGASLGELVVRGNTVMKGYLNNPEETRAAFADG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+TGD+ ++HPDGY+EIKDRSKD+IISGGENISS EIE VLY HP V EAAVV RPD
Sbjct: 418 WLHTGDLAVLHPDGYVEIKDRSKDIIISGGENISSLEIEEVLYQHPGVIEAAVVARPDSR 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P AFV+L+ + T+ D+I +CR R+ + P+ V + ELPKTATGK+QK
Sbjct: 478 WGETPHAFVTLRADALTN---TSGDDLILWCRERLAHFKAPRHVSLV-ELPKTATGKIQK 533
Query: 542 YVLGDIAN 549
+VL + A
Sbjct: 534 FVLREWAR 541
>gi|357517773|ref|XP_003629175.1| Acyl coa ligase acetate-coa synthetase-like protein [Medicago
truncatula]
gi|355523197|gb|AET03651.1| Acyl coa ligase acetate-coa synthetase-like protein [Medicago
truncatula]
Length = 732
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/492 (46%), Positives = 325/492 (66%), Gaps = 16/492 (3%)
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
P V+ +APN+PAMYELHFAVPM+GAI T+N+RLDA +S++L+HS++K++FVD+
Sbjct: 232 PASTVATLAPNVPAMYELHFAVPMAGAILCTLNSRLDANMVSVLLEHSQAKILFVDYQLL 291
Query: 123 SLLLEVVSLFPPHSK-TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
+ + L +K P LV+I D S+ I YE ++A G F
Sbjct: 292 EVARGALDLLAKRAKRKPILVMIIDSDCTSN-------IDITSISYDYEKLIAIGHNDFD 344
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
VRP S+LDP+ +NYT GTTS PKGVV ++ ++ ++ +++ + V LW +P+FH
Sbjct: 345 IVRPHSELDPISINYTSGTTSRPKGVVFSHRGAYLNSLATVLLLQMTLFPVYLWNVPLFH 404
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQ 299
NGW WG A TN+CLRK +F I KH VT+M GAP VLN++++S A K
Sbjct: 405 ANGWCLAWGVAAQFGTNICLRKVSPKNIFDNIIKHKVTYMGGAPTVLNMIANSTLADRKL 464
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L+ V ++TAGSPPP +L E GF ++H YG TE G CAW+P+W+ LP +E++
Sbjct: 465 LNHKVAVITAGSPPPPQILSMMEENGFNITHMYGLTETCGAGTFCAWRPEWDMLPPKEKS 524
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+KARQGV +GL E+D+ DP T SV DG+T GE++ RG ++M GY +D +AT + K
Sbjct: 525 KIKARQGVPHVGLEELDVKDPSTMDSVPADGKTVGEVMFRGNTMMSGYFQDFKATEEAFK 584
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
DG +++GD+ + H DGY+EIKDR KD+I+SGGENISS E+E+VLYSHP V EAAVV RPD
Sbjct: 585 DGWFHSGDLAVKHSDGYIEIKDRLKDIIVSGGENISSIEVETVLYSHPAVLEAAVVARPD 644
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W + PCA++ LK G D+ ++II +CR R+P +M PKTV+F D +PKT+TGK+
Sbjct: 645 DLWGQTPCAYLKLKDGFDAD-----VQEIINFCRDRLPHFMAPKTVIFQD-MPKTSTGKI 698
Query: 540 QKYVLGDIANSM 551
QK+VL + A ++
Sbjct: 699 QKFVLREKAKAL 710
>gi|389694232|ref|ZP_10182326.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Microvirga
sp. WSM3557]
gi|388587618|gb|EIM27911.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Microvirga
sp. WSM3557]
Length = 546
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/549 (43%), Positives = 339/549 (61%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PLTPL F+ERAA+ D ++I+ + Y R +LAS+L+ GI
Sbjct: 10 LDKNPANYQPLTPLSFLERAASVHPDRTAVIHGPLVRDYRDFYARARRLASALARRGIGR 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VSV+ PN PAM E H+ VPM+GA+ NT+NTRLDA+ I+ L HSE+K++ D S+
Sbjct: 70 GDTVSVMLPNTPAMLECHYGVPMAGAVLNTLNTRLDAKIIAFSLDHSEAKVLITDREFSA 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ ++ S LV+ DD E + P R+ + YE LA+GDP+F+W
Sbjct: 130 TVKAALA----RSSVKPLVIDYDDPEFTG---PGERLGAME----YEEFLAEGDPEFAWN 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + D + LNYT GTT PKGVV ++ +++A+ +++ + + V LWTLPMFH N
Sbjct: 179 PPRDEWDAITLNYTSGTTGDPKGVVYHHRGAYLLAMGNILTAGMGQHPVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLD 301
GW F W ++V +VCLR A ++ + VTH+CGAPIV++ L ++P E + L
Sbjct: 239 GWCFPWSLSIVAGIHVCLRAVRAKPMYDALADQRVTHLCGAPIVMSTLLNAPASEKRPLP 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ LTA +PPP VL ++ GF V+H YG TE+ G V W +W+ L A+
Sbjct: 299 HTVKFLTAAAPPPEAVLAAMKAAGFDVTHLYGLTEVYGPAVVNEWHDEWDALDQGGYAAK 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L +D++DPET V DG+T GE++ RG +M GYLK+P T+K + G
Sbjct: 359 KARQGVRYPVLEALDVLDPETMQPVPADGRTLGEVMFRGNVVMKGYLKNPSGTAKAFEGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G+ +PDGY+++KDRSKD+IISGGENISS E+E LY HP + AAVV PD
Sbjct: 419 WFHSGDLGVKYPDGYVQLKDRSKDIIISGGENISSIEVEDALYRHPAIQAAAVVAMPDEK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV L+ +DII +CR + Y P+TV+F ELPKT+TGK+QK
Sbjct: 479 WGETPCAFVELRPDQS-----VPAEDIIAWCRQHLASYKCPRTVIFT-ELPKTSTGKIQK 532
Query: 542 YVLGDIANS 550
+ L ++A +
Sbjct: 533 FQLREMARA 541
>gi|115361247|ref|YP_778384.1| AMP-dependent synthetase/ligase [Burkholderia ambifaria AMMD]
gi|115286575|gb|ABI92050.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria AMMD]
Length = 545
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 246/556 (44%), Positives = 337/556 (60%), Gaps = 28/556 (5%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
++R +PN L+PL F+ERAA+ + +I++ W++TYRRC LA +L G
Sbjct: 13 LERDRPN---FIALSPLTFLERAASVWPERTAIVHGTIRRDWAETYRRCRLLAGALRGRG 69
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G V++IA N P ++E HF VP+ GA+ NTINTRLDA TI+ IL H ++KL+ D
Sbjct: 70 IGNGDTVAMIAANTPELFEAHFGVPLCGAVLNTINTRLDADTIAFILDHGDAKLLITDR- 128
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFV--DTYENMLAKG-D 177
S T K L + I P+ D + YE +L +
Sbjct: 129 -------------EFSPTVKKALARLGRVIQVIDIDDPQCGEGDLLGEKDYEALLQEATH 175
Query: 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
+FS P+ + + LNYT GTT PKGVV ++ ++ AV + + W + + + LWTL
Sbjct: 176 TEFSVAMPEDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNAVSNALSWHLDEDTTYLWTL 235
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLS-SSPE 296
PMFH NGW F W A+V T+V LR A + A IR VTH C A +VLN+++ ++PE
Sbjct: 236 PMFHCNGWCFPWTMALVAGTSVFLRHTRAERILAAIRTEAVTHFCAASVVLNMINNAAPE 295
Query: 297 AKQ-LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
K + V+++T G+PPPA V+ E +G+ V+H YG TE G V C W+ WN L
Sbjct: 296 LKAGIRHRVKVMTGGAPPPASVIAGMECMGWEVTHAYGLTESYGPVVQCVWRESWNALEL 355
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
+A LKARQGVR L + + P+T V +DGQT GE+ +RG ++M GYLK+P+AT
Sbjct: 356 DAKARLKARQGVRGPVLEAMMVARPDTLEPVPKDGQTLGEVFLRGNNVMKGYLKNPDATV 415
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
+ G ++TGD+G+ HPDGYLEIKDRSKD+IISGGENISS EIE +LYSHP V EAA+V
Sbjct: 416 EAFSGGWFHTGDLGVWHPDGYLEIKDRSKDIIISGGENISSIEIEDILYSHPAVLEAAIV 475
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
RPD W E PCAF++LK + + TE DII +CR R+ + VPKT+VF LPKTA
Sbjct: 476 ARPDDKWGETPCAFITLKDDS-----VVTEADIIAFCRERLAHFKVPKTIVF-SPLPKTA 529
Query: 536 TGKVQKYVLGDIANSM 551
TGK+QK+ L + A +
Sbjct: 530 TGKIQKFNLRERARQL 545
>gi|56477375|ref|YP_158964.1| acyl-CoA synthetase [Aromatoleum aromaticum EbN1]
gi|56313418|emb|CAI08063.1| putative AMP-binding enzyme [Aromatoleum aromaticum EbN1]
Length = 546
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 249/550 (45%), Positives = 334/550 (60%), Gaps = 21/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PL+PL FIER A ++I+ +TW +TY RC +LAS+L G+
Sbjct: 10 LAKNTANYVPLSPLSFIERTAQVYPQRTAVIHGACRFTWQETYARCRRLASALVQHGVGC 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PN+PAM+E HF VPM GA+ NT+NTRLD I+ +L H E+K++ D +S
Sbjct: 70 GDTVAVMLPNVPAMFEAHFGVPMIGAVLNTLNTRLDPEAIAFMLAHGEAKVLITDPEFAS 129
Query: 124 LLLEVVSLFPPHSKTPK-LVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
L+ + PK LV+ D E S R+ + YE LA GDP+F+W
Sbjct: 130 LVGPALERL----DGPKPLVIDALDDEYPGSD----RLGAIE----YEEFLAAGDPEFAW 177
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P + D + LNYT GTT PKGVV ++ ++ A ++I W +P+ +V LWTLPMFH
Sbjct: 178 SLPPDEWDAIALNYTSGTTGNPKGVVYHHRGAYLNAASNIISWGMPQHAVYLWTLPMFHC 237
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--L 300
NGW F W A NVCLRK D ++ LIR H V+H CGAPIV +L ++PE + +
Sbjct: 238 NGWCFPWTMAANAGINVCLRKIDVALIYELIRTHKVSHFCGAPIVHGMLINAPEGMRDGI 297
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
V L AG+ PPA ++ E +GF ++H YG TE G CA P W++LP RA
Sbjct: 298 THKVSALIAGAAPPAAIIEGMERIGFDITHVYGLTETYGPASVCAKHPSWDELPIDRRAE 357
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
RQGVR + ++DPET + V DG+T GEI+ RG +M GYLK+ +A+ +
Sbjct: 358 RNGRQGVRYHMQEAIAVLDPETMVPVPADGETMGEIMFRGNLVMKGYLKNEKASDEAFAG 417
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+ +MHPDGY++IKDRSKDVIISGGENISS E+E LY HP V AAVV +PD
Sbjct: 418 GWFHTGDLAVMHPDGYVKIKDRSKDVIISGGENISSLEVEEALYRHPAVMTAAVVAKPDE 477
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+P A++ +K GT T DII +CR + RY VPK + F LPKT+TGK+Q
Sbjct: 478 KWGEVPAAYIEVKDGT-----AVTVDDIIAHCREHLARYKVPKHIEFC-VLPKTSTGKIQ 531
Query: 541 KYVLGDIANS 550
K+VL + A S
Sbjct: 532 KFVLREQAKS 541
>gi|242060224|ref|XP_002451401.1| hypothetical protein SORBIDRAFT_04g001460 [Sorghum bicolor]
gi|241931232|gb|EES04377.1| hypothetical protein SORBIDRAFT_04g001460 [Sorghum bicolor]
Length = 592
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 259/568 (45%), Positives = 364/568 (64%), Gaps = 32/568 (5%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTY------TWSQTYRRCLQLASSLSSFGIN 62
AN PLTP+ F+ER A D P+++ TW +T RCL+LA++L+ G+
Sbjct: 9 ANHAPLTPISFLERTALVYPDRPAVVAAGHAAAQPPPRTWRETRDRCLRLAAALAGLGVA 68
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
VV+V A NIPA ELHF +PM+GA+ +N+RLDA S++L+HSE+K+VFVD
Sbjct: 69 RRDVVAVFAQNIPAFCELHFGIPMAGAVICALNSRLDAGMASVLLQHSEAKVVFVDAALL 128
Query: 123 SLLLEVVSLFPPHS-------KTPKLVLITD--DKEISSSSSPPPRIPPADFVDTYENML 173
+ E + L + + P +VLI + D+ +S+++ +IP D YE +L
Sbjct: 129 GVAREALRLISQQAAAARASCRVPTVVLINEVLDEPLSAATGDN-KIPGVDRCYEYEALL 187
Query: 174 AKG---DPQFSWVR-PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPK 229
+ +P+ +R P + +P+ LNYT GTTS PKGVV ++ ++ + S++ +
Sbjct: 188 SSSSSCNPEEFLIRWPVDENEPIALNYTSGTTSRPKGVVYTHRGAYLNTLASVLLNDMTA 247
Query: 230 QSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN 289
V LWT+PMFH NGW WG A G TNVCLRK + +FA + H VTHM GAP VLN
Sbjct: 248 LPVYLWTVPMFHCNGWCLVWGVAAQGGTNVCLRKVTSAAIFAAVAAHRVTHMGGAPTVLN 307
Query: 290 LL--SSSPEAKQLD---RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSC 344
++ +++ E + L +PV ++T G+PPP VL R E LGF+V H YG TE G C
Sbjct: 308 MVVNATAEERRPLKAGGKPVTVMTGGAPPPPQVLFRMEELGFLVIHSYGLTETYGPATVC 367
Query: 345 AWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLM 404
W+P+W+ LPA ERA++K+RQG+ +GL EVD+ DP T SV DG+T GE++ RG ++M
Sbjct: 368 TWRPEWDALPAAERAAIKSRQGLHHLGL-EVDVKDPATMASVPADGRTMGEVMFRGNTVM 426
Query: 405 LGYLKDPEATSKCMKDGRYYTGDVGMMHP-DGYLEIKDRSKDVIISGGENISSTEIESVL 463
GY KD AT++ M G +GD+ + H DGY++I DRSKD+IISGGENIS+ E+E+ L
Sbjct: 427 SGYYKDAAATAEAMAGGWLRSGDLAVRHAGDGYVKILDRSKDIIISGGENISTIEVEAAL 486
Query: 464 YSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPK 523
++HP V EAAVVGRPD +W E PCAFV+LK G D G ++++ +CRAR+PRYM P+
Sbjct: 487 FAHPAVAEAAVVGRPDEYWGETPCAFVTLKEGKDVGA-----EEVMAFCRARLPRYMAPR 541
Query: 524 TVVFIDELPKTATGKVQKYVLGDIANSM 551
TVVF+ ELPKTATGKVQK+ L + A +M
Sbjct: 542 TVVFVAELPKTATGKVQKFALREQAKAM 569
>gi|413961541|ref|ZP_11400769.1| AMP-dependent synthetase and ligase [Burkholderia sp. SJ98]
gi|413930413|gb|EKS69700.1| AMP-dependent synthetase and ligase [Burkholderia sp. SJ98]
Length = 547
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/553 (44%), Positives = 332/553 (60%), Gaps = 19/553 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L AN LTPL FIERAA+ P+I++ D W+ TY R +LAS+L++ GI
Sbjct: 8 DGLPKTAANYAALTPLMFIERAASVYPTLPAIVHGDVRRNWADTYARTRRLASALAARGI 67
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
G V+ + PN P M E HF VPM+GA+ NT+NTRLDA T++ +L H E+K V VD
Sbjct: 68 GLGDTVAAMLPNTPEMVEAHFGVPMTGAVLNTLNTRLDAATLAFMLTHGEAKAVLVDREF 127
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
S + + P LV+ DD + + + I YE +LA GDP +
Sbjct: 128 SDVTRRALKDVPQDV----LVIDVDDPQYAGAGERIGEI-------EYEALLASGDPAYE 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + + + LNYT GTT PKGVV ++ + AV ++++W +PK +V LWTLPMFH
Sbjct: 177 WSPPSDEWNAICLNYTSGTTGNPKGVVYHHRGAYTNAVSNILEWDMPKHAVYLWTLPMFH 236
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A NVCLR+ DA T+F LIR VTH CGAPIV NLL ++P+ +
Sbjct: 237 CNGWCFPWTVAARAGVNVCLRRVDAKTIFDLIRSERVTHYCGAPIVQNLLVNAPDDMKTG 296
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
D+ V + AG+ PPA ++ E +GF ++H YG TE+ G C + +W+ L ERA
Sbjct: 297 FDQKVHAMVAGAAPPAAMIEGMERMGFELTHVYGLTEVYGPATVCPQQAEWSALDIGERA 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L ARQGVR V + DP + V DG+T GEI+ RG M GYLK+ AT + +
Sbjct: 357 RLNARQGVRYHLQDAVTVRDPISMELVPSDGETIGEIMFRGNIAMKGYLKNAAATEEAFR 416
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+ + +PDGY+ IKDRSKD+IISGGENISS E+E VLY HP V AVV +PD
Sbjct: 417 GGWFHTGDLAVAYPDGYVRIKDRSKDIIISGGENISSIEVEDVLYRHPAVLAVAVVAKPD 476
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E PCAFV LK+G + + ++I +C+ + + VP+ + F ELPKT+TGK+
Sbjct: 477 TRWGETPCAFVELKSGAHA-----SADELIAHCKKHLAGFKVPRAIEFC-ELPKTSTGKI 530
Query: 540 QKYVLGDIANSMS 552
QK+ L A S++
Sbjct: 531 QKFELRKRAGSVT 543
>gi|300313986|ref|YP_003778078.1| acyl-CoA synthetase/AMP-acid ligase II protein [Herbaspirillum
seropedicae SmR1]
gi|300076771|gb|ADJ66170.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II protein
[Herbaspirillum seropedicae SmR1]
Length = 546
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/543 (44%), Positives = 327/543 (60%), Gaps = 18/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN LTP+ FI RAA +II+ W QTYRR +LAS+L G+
Sbjct: 8 LGRNAANYAALTPIDFIARAAAVYGKRTAIIHGALRQDWDQTYRRTRRLASALQGLGVGK 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
VS + PN PAM E HF VPM+GA+ N +N RLDA +I +L+H E+K++ +D ++
Sbjct: 68 NDTVSAMLPNTPAMVEAHFGVPMAGAVLNALNIRLDAESIVFMLRHGEAKVLLIDSEFAA 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L ++ ++ P L ++ E+ PPP YE +LA GD F W
Sbjct: 128 LAQQL------RTQLPALKIV----EVFDELGPPPVAGERFGHLEYEALLAGGDEHFDWQ 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ + AV ++++W +PK V LWTLPMFH N
Sbjct: 178 MPADEWDAIALNYTSGTTGDPKGVVYHHRGAALNAVSNILEWDLPKHPVYLWTLPMFHCN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W A NVCLRKF+ VF LI +HG+TH C APIV L+++PE + +
Sbjct: 238 GWCFPWTVAARAGVNVCLRKFEPKLVFDLIAEHGITHYCAAPIVHAALANAPEGWRAGIR 297
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV+ + AG+PPPA VL + E++ F ++H YG TE+ G CA + +WN L +RA
Sbjct: 298 GPVKAMVAGAPPPAAVLAKMEAMQFELTHVYGLTEVYGPAAVCAEQDEWNTLSVDQRAVQ 357
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR + V ++ P+T V DG+ GEI+ RG M GYLK+ AT + G
Sbjct: 358 KSRQGVRYHLQSGVTVLSPDTMAPVAADGEEIGEIMFRGNICMKGYLKNDRATHEAFAGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G+M+ DGY++IKDRSKD+IISGGENISS E+E VLY HP V AAVV +PD
Sbjct: 418 WFHTGDLGVMNADGYIKIKDRSKDIIISGGENISSVEVEDVLYRHPAVLAAAVVAQPDEK 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK G + G TE +CR+ + + VPK + F LPKT+TGK+QK
Sbjct: 478 WGETPCAFVELKEGAEVGAAELTE-----FCRSHLAGFKVPKAIYF-GPLPKTSTGKIQK 531
Query: 542 YVL 544
+ L
Sbjct: 532 FEL 534
>gi|372272067|ref|ZP_09508115.1| acyl-CoA synthetase [Marinobacterium stanieri S30]
Length = 541
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/545 (43%), Positives = 338/545 (62%), Gaps = 22/545 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P AN LTP F++RAA A + ++I+ D TW +TY+RCL+LAS+L G+
Sbjct: 9 LDPVEANFSALTPTTFVKRAALAHPNRTAVIHGDIKRTWQETYQRCLKLASALRKLGVKK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIP M ELHFAVPM GA+ N NTRLDA+T++ +L H ++ + F D S
Sbjct: 69 GDTVAALLPNIPEMLELHFAVPMLGAVLNAQNTRLDAKTMTFMLNHGKAGVFFTDREYSD 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD--TYENMLAKGDPQFS 181
E ++ PK++ + D P + + T+E +LA GD F
Sbjct: 129 RAREALA---GCDAKPKVIDVDD-----------PLFDGGELIGDMTFEALLATGDDDFE 174
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + + LNYT GTT PKGVV ++ F+ A+ +++ + +P +V LWTLPMFH
Sbjct: 175 WELPGQEWQSIALNYTSGTTGNPKGVVYHHRGAFLSALSNVVGFGLPDGAVYLWTLPMFH 234
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL- 300
NGW + W V T+VCLR+ +F + +HGVTH C APIVLN+L + PE ++L
Sbjct: 235 CNGWCYPWAVTAVAGTHVCLRQPHPKPIFEALARHGVTHFCAAPIVLNMLINVPEEQKLP 294
Query: 301 -DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
++ V T G+ PPA + E +G V H YG TE G +V C ++ +W++L +E+A
Sbjct: 295 FEQQVTAATGGAAPPAATIEAMEEMGIKVVHLYGLTETYGPSVVCDFQDEWHQLNPKEKA 354
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+RQG+ ++ ++++ + DP T V++DG GE+ +RG S+M GYL +P+ T K
Sbjct: 355 QKMSRQGIPSLTMSDMMVADPSTLEPVRQDGMAIGEVFLRGNSVMKGYLNNPDETRKAFS 414
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+G+ H DGY+EIKDRSKD+IISGGENIS+ EIES LY+HP V EAAVV PD
Sbjct: 415 GGWFHTGDLGVWHADGYIEIKDRSKDIIISGGENISTLEIESALYNHPSVLEAAVVAAPD 474
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W EIPCAF+++K GTD +E D+I +CR + + VPK V+F LPKT+TGK+
Sbjct: 475 EHWGEIPCAFITVKQGTDE----LSEDDVITHCREYLAGFKVPKKVIFTPALPKTSTGKL 530
Query: 540 QKYVL 544
QK+VL
Sbjct: 531 QKHVL 535
>gi|334140779|ref|YP_004533985.1| fatty-acyl-CoA synthase [Novosphingobium sp. PP1Y]
gi|333938809|emb|CCA92167.1| fatty-acyl-CoA synthase [Novosphingobium sp. PP1Y]
Length = 545
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/548 (43%), Positives = 333/548 (60%), Gaps = 25/548 (4%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
N PLTPL F+ RAA + ++++ +W +T+ RC++L S+L + G+N G VV++
Sbjct: 18 NFTPLTPLSFLPRAAKIFPEKIALVHGTLRQSWCETHARCVRLGSALRARGVNRGDVVAI 77
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
IAPNIPAMYE HF VPM+GAI NT+NTRL A I+ L H ++++ VD S E V
Sbjct: 78 IAPNIPAMYEAHFGVPMAGAILNTLNTRLKAEEIAFQLGHGRARILMVDREFS----ETV 133
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD---TYENMLAKGDPQFSWVRPK 186
+ P L++ DD P A F + YE +LA+G P+ W+ P+
Sbjct: 134 AAATKIMADPPLIVDIDD----------PLYGGACFTEGAIAYEGLLAEGSPEVPWLMPE 183
Query: 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
+ DP+ LNYT GTT PKGV+ ++ ++ ++ +I W +P V LWTLPMFH NGW
Sbjct: 184 DERDPISLNYTSGTTGDPKGVLTHHRGAYLNSLSQIITWTMPLNPVYLWTLPMFHCNGWC 243
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLDRPV 304
F W A G TN+CLRK D P V LI H V+H+CGAPIV ++L + L + V
Sbjct: 244 FPWALAAQGGTNICLRKVDPPLVLDLIAAHRVSHLCGAPIVYSMLIDELTRNESTLRKSV 303
Query: 305 RILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
+ + AG+ PP ++ E +GF ++H YG TE+ G C +P W A ERA L AR
Sbjct: 304 QGMIAGAAPPKALMQGAERVGFDLTHVYGLTEVYGPAAVCLKQPDWADKTAEERARLNAR 363
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYY 424
QGV I + ++DP T V DG+T GEI+ RG + M GYL +P+AT + G ++
Sbjct: 364 QGVAMISQDAMCVLDPATMAPVPADGETAGEIMFRGNATMTGYLNNPQATIEAFAGGWFH 423
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
TGD+ ++ DGY I DRSKD+IISGGENISS E+E VL+ HP V+ AAVV +PD W E
Sbjct: 424 TGDLAVVESDGYARITDRSKDIIISGGENISSLEVEDVLHQHPSVSLAAVVAKPDARWGE 483
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
+ CAF+ L+TG + + ++ +CR+ I + VPK ++F E+PKT+TGKVQK VL
Sbjct: 484 VACAFIELRTGEQA-----SPVELQAFCRSHIAGFKVPKVIMF-GEIPKTSTGKVQKAVL 537
Query: 545 GDIANSMS 552
++A +MS
Sbjct: 538 REVAKAMS 545
>gi|169825388|ref|YP_001691281.1| hypothetical protein M446_7038 [Methylobacterium sp. 4-46]
gi|168199310|gb|ACA21256.1| hypothetical protein M446_7038 [Methylobacterium sp. 4-46]
Length = 544
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/550 (44%), Positives = 331/550 (60%), Gaps = 18/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PLTPL F+ER AT D ++IY ++ Y R +LAS+L++ GI
Sbjct: 11 LDRNPANFQPLTPLTFLERTATVFPDHVAVIYGSLRRSYRDFYARTRRLASALAARGIGR 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PN PA+ E H+ VPM+GA+ NT+NTRLDA I+ L H E+K++ D +
Sbjct: 71 GDTVAVMLPNTPALIECHYGVPMTGAVLNTLNTRLDAAMIASFLDHGEAKVLITDREFAR 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ ++ H+K LV+ DD E S R+ D YE LA GDP +W
Sbjct: 131 VIKPALA----HAKVRPLVIDYDDPEFSGEGE---RLGSLD----YEAFLASGDPAHAWS 179
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ + AV +++ + K V LWTLPMFH N
Sbjct: 180 LPGDERDAITLNYTSGTTGDPKGVVYDHRGACLQAVGNVVTTGLGKHPVYLWTLPMFHCN 239
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLD 301
GW F W +VV T+VCLR+ A V+ I HGVTH+CGAP+V+ L ++P E + L
Sbjct: 240 GWCFPWTLSVVAGTHVCLRQVRAKAVYDAIADHGVTHLCGAPVVMQQLLNAPAAERRALP 299
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + G+PPP L GF V+H YG TE G V W W+ L E+A+
Sbjct: 300 HPVSFVVGGAPPPEAGLAGMAEAGFDVTHVYGLTETYGPAVVNEWHADWDALTTPEQAAR 359
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L +D++DP+T V DGQT GE++ RG +M GYLK+P+AT + + G
Sbjct: 360 KARQGVRYPPLEALDVLDPKTMRPVPADGQTVGEVMFRGNVVMRGYLKNPKATEEAFRGG 419
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G+ HPDGYL++KDRSKD+IISGGENI S E+E L+ HP V +A VVG+PD
Sbjct: 420 WFHSGDLGVKHPDGYLQLKDRSKDIIISGGENIWSIEVEEALFKHPAVADAGVVGKPDEK 479
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E CAFV K G + M + +++I +CR + Y VPK VF ELPK +TGK K
Sbjct: 480 WGEAVCAFVERKNGFE----MVSAEELIDWCRQSLASYKVPKH-VFFTELPKNSTGKTNK 534
Query: 542 YVLGDIANSM 551
L ++ ++
Sbjct: 535 VQLREMGKAL 544
>gi|255320854|ref|ZP_05362028.1| acyl-CoA synthetase [Acinetobacter radioresistens SK82]
gi|262380253|ref|ZP_06073408.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter radioresistens
SH164]
gi|255302023|gb|EET81266.1| acyl-CoA synthetase [Acinetobacter radioresistens SK82]
gi|262298447|gb|EEY86361.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter radioresistens
SH164]
Length = 547
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/554 (44%), Positives = 346/554 (62%), Gaps = 18/554 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L PAN L+PL ++ERAA +II+ +W +TY+RC Q A L GI
Sbjct: 6 DELPRTPANFVALSPLRYLERAAYIYPHQAAIIHGSRQISWRETYQRCRQFADQLQKLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PN+PAM E HFAVPM+GA+ NT+NTRLDA+T++ +L+H+ESK++ VD
Sbjct: 66 QKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTLAFMLEHAESKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
S+L E ++L V+ DD E + + P I + YE+ L +G+ F
Sbjct: 126 STLAKEALALV----SQDIYVIDVDDAEYENCFNAP--IGEIE----YEDWLTEGNADFE 175
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P+ + D + LNYT GTT PKGVV ++ +I A ++I + ++ LWTLP+FH
Sbjct: 176 WHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYINAASNIIACGMTPRATYLWTLPLFH 235
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A G TNVCLRK D +F LI +H V + CGAPIVL++L ++P K+
Sbjct: 236 CNGWCFAWTMAANGGTNVCLRKVDPELIFKLIAEHKVDYFCGAPIVLSMLINTPAEKRTY 295
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
D V ++ AG+ PPA ++ ++G V+H YG TE G + CA + W+ L +E+A
Sbjct: 296 FDHRVEVMVAGAAPPAAIIEGMRNIGINVTHVYGLTETYGPSALCASQAGWSDLTIQEQA 355
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L +RQGV + ++DPET L V DGQ+ GEI+ RG +M GYLK+PEAT++ K
Sbjct: 356 QLHSRQGVPYPLQDGMKVLDPETMLPVPNDGQSMGEIMFRGNIVMKGYLKNPEATAEAFK 415
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+ + PDGY +I DR+KDVIISGGENISS E+E VLY HP V AAVV +PD
Sbjct: 416 GGWFHTGDLAVCQPDGYAKITDRAKDVIISGGENISSLEVEEVLYQHPAVLTAAVVAKPD 475
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
P WQE+PCAFV LK G+ + +++ ++C+ + R+ VPK ++ D +PKT+TGK+
Sbjct: 476 PRWQEVPCAFVELKE-----GISISAEELTEHCKQGLARFKVPKEIIITD-IPKTSTGKL 529
Query: 540 QKYVLGDIANSMSM 553
QK++L + A S+
Sbjct: 530 QKFILREWAKERSV 543
>gi|94314687|ref|YP_587896.1| acyl-CoA synthetase [Cupriavidus metallidurans CH34]
gi|93358539|gb|ABF12627.1| AMP-dependent synthetase and ligase; putative
o-succinylbenzoate-CoA ligase [Cupriavidus metallidurans
CH34]
Length = 544
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 247/548 (45%), Positives = 328/548 (59%), Gaps = 31/548 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN P+TPL FI RAA D +I++ W TY RC +LAS+L+ G+
Sbjct: 9 LARNPANYVPITPLDFIARAAEVYGDRLAIVHGTVRQNWRDTYARCRRLASALTRAGVGK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PN PAM E HF VPM+GA+ N +N RLDA + +L+H E+K++ D +
Sbjct: 69 GDTVAALLPNTPAMVEAHFGVPMAGAVLNALNIRLDAANLVFMLRHGEAKVLLAD----T 124
Query: 124 LLLEVVSLFPPHSKTPKLVLITD----DKEISSSSSPPPRIPPADFVDT-YENMLAKGDP 178
+ + K++ + D D E F DT YE+ LA GDP
Sbjct: 125 EFADAARQMAREVRGLKVIAVEDVLGPDAE--------------RFGDTDYESFLASGDP 170
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
+F W P + D + LNYT GTT PKGVV ++ + A+ ++++W + K V LWTLP
Sbjct: 171 EFDWKMPGDEWDAIALNYTSGTTGDPKGVVYHHRGAAMNAISNILEWDMAKHPVYLWTLP 230
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA- 297
MFH NGW F W A NVCLRKF+ VF L+R GVTH C APIV L ++P +
Sbjct: 231 MFHCNGWCFPWTVAARAGVNVCLRKFEPKLVFDLMRDEGVTHYCAAPIVHTALVNAPPSW 290
Query: 298 -KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
+ L PVR + AG+PPPA VL + E++GF +SH YG TE+ G CA + W+ +
Sbjct: 291 REGLRGPVRGMVAGAPPPAAVLAQMEAMGFDLSHVYGLTEVYGPAAVCAEQDAWHTVSQE 350
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
ERA LKARQGVR + V ++DP+T V RDG+T GEI+ RG M GYLK+ +AT +
Sbjct: 351 ERAVLKARQGVRYHLQSGVTVLDPDTMQPVPRDGETIGEIMFRGNICMKGYLKNDKATRE 410
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
G ++TGD+G+ PDGY++IKDRSKD+IISGGENISS E+E LY HP V AAVV
Sbjct: 411 AFAGGWFHTGDLGVCMPDGYIKIKDRSKDIIISGGENISSVEVEDALYRHPAVLAAAVVA 470
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
+PD W E PCAFV LK G T +++I +CR + + VPK V F LPKT+T
Sbjct: 471 QPDAKWGETPCAFVELKDGAS-----VTAEELIAHCRTLLAGFKVPKAVYF-GPLPKTST 524
Query: 537 GKVQKYVL 544
GK+QK+ L
Sbjct: 525 GKIQKFEL 532
>gi|297600278|ref|NP_001048877.2| Os03g0133600 [Oryza sativa Japonica Group]
gi|255674181|dbj|BAF10791.2| Os03g0133600, partial [Oryza sativa Japonica Group]
Length = 499
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/490 (47%), Positives = 319/490 (65%), Gaps = 21/490 (4%)
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD-HL--SSS 123
V+V++PN+PAMYELHFAVPM+GA+ T N R DA IS +L HS +K+ FV+ HL
Sbjct: 15 VAVLSPNVPAMYELHFAVPMAGAVLCTFNARHDAAMISTLLSHSGAKVFFVESHLLDVGR 74
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L ++ + P L+ I+DD + S VD YE+++ +F
Sbjct: 75 AALRRLAGSTSAASLPVLLTISDDGAGARDSG---------CVD-YEDLVRDAPSEFDIR 124
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P ++DP+ LNYT GTTS PKGVV ++ ++ + +++ + + LWT+PMFH N
Sbjct: 125 WPVDEMDPITLNYTSGTTSRPKGVVYNHRGAYLNTIATVLAYDITAMPTYLWTVPMFHCN 184
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW+ WG A+ G TN+CLR F A +F I +HGVTHM GAP VLN+++++P A + L
Sbjct: 185 GWNLPWGVAMQGGTNICLRHFTAKVIFDSIARHGVTHMGGAPTVLNMIANAPAADRRALP 244
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PVR++T G+ PP VLL E LGF++ H YG TE G C W P+W+ LPA ERA L
Sbjct: 245 GPVRVMTGGAAPPPRVLLAVEELGFVLYHIYGLTETYGPATVCTWMPEWDALPAEERARL 304
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQG I + +V + + T +V DGQT GE++ RG ++M GY KD AT + M G
Sbjct: 305 KARQGFHHIAVQDVAVKNSATMENVPYDGQTVGEVMFRGNTVMSGYYKDIGATKESMAGG 364
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++GD+ + HPDGY+++KDR+KD+IISGGENISS E+ESV++SHP V EAAVV RPD +
Sbjct: 365 WLHSGDLAVRHPDGYIQLKDRAKDIIISGGENISSIEVESVIFSHPAVLEAAVVARPDDY 424
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK G ++ TE +II +CR R+P YM PKTVVF D+LPKT+TGK QK
Sbjct: 425 WGETPCAFVKLKDGANA-----TEGEIISFCRERLPHYMAPKTVVF-DDLPKTSTGKTQK 478
Query: 542 YVLGDIANSM 551
+VL + A +M
Sbjct: 479 FVLREKARAM 488
>gi|224825618|ref|ZP_03698723.1| AMP-dependent synthetase and ligase [Pseudogulbenkiania
ferrooxidans 2002]
gi|224602539|gb|EEG08717.1| AMP-dependent synthetase and ligase [Pseudogulbenkiania
ferrooxidans 2002]
Length = 546
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/543 (44%), Positives = 336/543 (61%), Gaps = 20/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PL+PL F+ER+AT + + I+ D TW + Y+RC +LAS+L GI
Sbjct: 11 LDKGSANYVPLSPLTFLERSATVYPERIASIHGDWRMTWREVYQRCRRLASALQRRGIGA 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM+E HF VPM GA+ NT+NTRLDA +I+ +L+H E+K++ D
Sbjct: 71 GDTVAVMLPNIPAMFECHFGVPMCGAVLNTLNTRLDAESIAFMLRHGEAKVLITDREFCE 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ + ++L T LV+ DD + + D YE +L +GDP+F+W
Sbjct: 131 PVAKALALL----DTKPLVIDVDDHLFTGGD----LLGETD----YEALLQEGDPEFAWS 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++ AV +L +W VP+ +V LWTLPMFH N
Sbjct: 179 LPNDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAVCNLFEWGVPRHAVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQLD 301
GW F W A TNV LR+ D +FA I++H VTH C APIV N++ + + + ++
Sbjct: 239 GWCFPWAMAANAGTNVFLRRVDPRQIFAQIKQHRVTHYCAAPIVHNMMINVADECGQGIE 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V L AG+ PPA V+ + LGF ++H YG TE G CA +P+W L ER
Sbjct: 299 HEVSCLVAGAAPPAAVIEGMQRLGFNITHVYGLTETYGPAGVCAKQPEWEALSLAERTER 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
RQGVR + +++PET V DG+T GEI+ RG +M GYLK+ +A+++ G
Sbjct: 359 NGRQGVRYAMQEGMTVMNPETMQQVPADGETMGEIMFRGNLVMKGYLKNQDASAEAFAGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ ++ PDGY++IKDRSKD+IISGGENISS E+E VLY HP V AAVV +PD
Sbjct: 419 WFHTGDLAVLQPDGYVKIKDRSKDIIISGGENISSLEVEDVLYRHPAVMSAAVVAKPDTK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+ CAFV LK G + TE++II YCRA + + PK VVF +PKT+TGK+QK
Sbjct: 479 WGEVTCAFVELKDGA-----VATEREIIDYCRAHLAHFKAPKQVVF-GPIPKTSTGKIQK 532
Query: 542 YVL 544
++L
Sbjct: 533 FLL 535
>gi|71082954|ref|YP_265673.1| acyl-CoA synthetase [Candidatus Pelagibacter ubique HTCC1062]
gi|71062067|gb|AAZ21070.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Candidatus
Pelagibacter ubique HTCC1062]
Length = 542
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/551 (43%), Positives = 341/551 (61%), Gaps = 18/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PL+PL F+ER + +++Y +YTW + Y+RC++ AS+L G+
Sbjct: 8 LDKNEANYVPLSPLTFLERTKDIYPNYEALVYESRSYTWEEVYKRCVKFASALDKLGVKT 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS++A N P ++E H+++PM GA+ N INTRLD TIS IL+HS++K++ VD
Sbjct: 68 GDTVSIMAFNTPEIFEAHYSIPMVGAVINAINTRLDPNTISYILQHSDAKVLIVDRQ--- 124
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+V+ + K ++ DD++I +SS RI + YE+ L G+ + W
Sbjct: 125 -FHDVIEKALKNVKNKITIIDIDDQDIDTSSFK--RIGELE----YESFLNTGNENYEWK 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
+PK + + + L YT GTT PKGVV ++ +++A S+ W +P + L +PMFH N
Sbjct: 178 KPKDEWEAISLGYTSGTTGNPKGVVYHHRGSYLMATGSVTAWNMPNKLNFLCVVPMFHCN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W A++ A +CLR D +F LI K+ VTH GAPIVLN++ ++P+ Q L
Sbjct: 238 GWCYPWTLAMLHARVICLRNIDVKKMFELIDKYEVTHFGGAPIVLNMIVNAPKEDQKALK 297
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R V +LTAG+PPP+ + + E+LGF V H YG TE G + CAW WN L ++ +
Sbjct: 298 RKVNVLTAGAPPPSIIFEKMENLGFEVMHVYGLTETYGHMLQCAWNDDWNSLEKDKKNEI 357
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR ++DPET V +DG+T GEI++RG +M GY KD EAT K M G
Sbjct: 358 KARQGVRYPNTEGAIVMDPETMKPVPKDGKTMGEIMIRGNIVMKGYYKDKEATDKSMAGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+ + HPDGY++I+DRSKD+IISGGENISS EIE+ + HP V+ AAVV +PD
Sbjct: 418 WFHSGDLAVTHPDGYIKIQDRSKDIIISGGENISSIEIENAIAKHPSVSLAAVVAKPDEK 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV L + TEK+II +CR + + +PK+V+F D LPKT+TGK+QK
Sbjct: 478 WGETPCAFVELIKDKPA-----TEKEIIDFCRETLAGFKLPKSVIFCD-LPKTSTGKIQK 531
Query: 542 YVLGDIANSMS 552
+ L +S
Sbjct: 532 FELRKKVKELS 542
>gi|359788674|ref|ZP_09291645.1| acyl-CoA synthetase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359255466|gb|EHK58376.1| acyl-CoA synthetase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 546
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/552 (44%), Positives = 336/552 (60%), Gaps = 18/552 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ N AN PLTPL ++ERAA D +II+ ++ +RR LQLAS+L+ GI
Sbjct: 9 LERNTANFQPLTPLTYLERAAKTYPDQTAIIHGSLRLSYRDFWRRSLQLASALAQKGIGK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ N PAM E HF VPM A+ +++NTRLDA I+ L H+E+K++ VD S+
Sbjct: 69 GDTVTVMLSNTPAMLEAHFGVPMVKAVLHSLNTRLDAAVIAFQLDHAETKVLIVDREFST 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPP--PRIPPADFVDTYENMLAKGDPQFS 181
+ E ++L +K LV+ DD E ++ + P RI D YE ++ GDP+FS
Sbjct: 129 VTKEALAL----AKVRPLVIDYDDPEYAADAPYPKGERIGSLD----YEEFVSSGDPEFS 180
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + D + LNYT GTT PKGVV ++ ++A + I + K LWTLPMFH
Sbjct: 181 WSMPDDEWDAISLNYTSGTTGNPKGVVYHHRGAALMAYANTIHAGMGKHPAYLWTLPMFH 240
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD 301
NGW F W AV T+VCLR A ++ I HGVTH+CGAPIV++ L +P+A + +
Sbjct: 241 CNGWCFPWTLAVQAGTHVCLRWVRAKAMYDAIADHGVTHLCGAPIVMSTLIDAPDADKRE 300
Query: 302 RP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
P V TA +PPP VL GF V+H YG TE G V W W+ L R
Sbjct: 301 FPQTVTFNTAAAPPPEAVLSGMADAGFAVTHLYGLTETYGPAVVNEWHAGWDALDKGPRT 360
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+ KARQGVR L + ++DPET + DG+T GE++ RG +M GYLK+ AT +
Sbjct: 361 ARKARQGVRYAALEALTVLDPETMEATPADGETIGEVMFRGNIVMKGYLKNRPATDEAFA 420
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+G+MHPDGY+++KDRSKD+IISGGENISS E+E LY HP V VV RPD
Sbjct: 421 GGWFHSGDLGVMHPDGYIQLKDRSKDIIISGGENISSIEVEDALYKHPAVASCGVVARPD 480
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E P A+V LK G + TE +II++CR + R+ P+TV+F E+PKT+TGK+
Sbjct: 481 DKWGETPVAYVELKPGKAA-----TESEIIEHCRTLLARFKCPRTVIFA-EIPKTSTGKM 534
Query: 540 QKYVLGDIANSM 551
QK+ L ++A ++
Sbjct: 535 QKFRLRELAKAL 546
>gi|254485686|ref|ZP_05098891.1| AMP-dependent synthetase and ligase [Roseobacter sp. GAI101]
gi|214042555|gb|EEB83193.1| AMP-dependent synthetase and ligase [Roseobacter sp. GAI101]
Length = 547
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/551 (43%), Positives = 343/551 (62%), Gaps = 21/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PLTPL F+ERAAT + +II+ +++ Y R +LAS+L+ GI
Sbjct: 11 LDRNPANYQPLTPLTFLERAATVFPEHTAIIHGALRRSYAVFYARSRRLASALAQRGIGR 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS + PN PAM E H+ VPM G + ++INTRLDA I+ L H+ S++V VD
Sbjct: 71 GDTVSAMLPNTPAMLECHYGVPMCGGVLHSINTRLDAAIIAFQLDHAMSRIVIVDSEFMP 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L+ E ++L ++ LV+ DD E ++ D D YE+ LA+GDP F+W+
Sbjct: 131 LMQEALAL----AEVRPLVIQVDDPEYDGTTEA------FDGAD-YESFLAEGDPAFAWL 179
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + D + +NYT GTT PKGVV ++ +++A + + + K +V LWTLPMFH N
Sbjct: 180 MPEDEWDAISINYTSGTTGDPKGVVSHHRGAYLLAQGNALTTSMRKHAVYLWTLPMFHCN 239
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W + + T+VCLR+ A ++ + VTH+CGAPIV++L+ S+P Q LD
Sbjct: 240 GWCFPWTLSAIIGTHVCLRQVRAEPIWNALADEKVTHLCGAPIVMSLMISAPAETQRALD 299
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ TA +PPP +L ++ GF V+H YG TE G V W W+ LP+ E+A L
Sbjct: 300 HTVQFFTAAAPPPEKLLADMQTAGFEVTHLYGLTETYGPAVVNDWHESWSSLPSGEQARL 359
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR + L +D++DPET V RDG T GE++ RG +M GY ++P+AT + G
Sbjct: 360 KSRQGVRYLPLEGLDVLDPETMQPVPRDGVTMGEVMFRGNVVMKGYFRNPQATQTAFEGG 419
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G++HPDGY+++KDRSKD+IISGGENISS E+E VLYS+P V AAVV P P
Sbjct: 420 WFHSGDLGVVHPDGYIQLKDRSKDIIISGGENISSIEVEEVLYSYPSVEIAAVVAMPHPK 479
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQ-YCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E PCAF+ K+G + + D ++ +CR R+ Y VP V + +P+T+TGK+Q
Sbjct: 480 WGETPCAFIEPKSGHE------IDTDALRTWCRERLAAYKVPGKFV-VTTIPRTSTGKIQ 532
Query: 541 KYVLGDIANSM 551
K+ L D A +
Sbjct: 533 KFALRDRAREL 543
>gi|409408477|ref|ZP_11256912.1| acyl-CoA synthetase/AMP-acid ligase II protein [Herbaspirillum sp.
GW103]
gi|386431799|gb|EIJ44627.1| acyl-CoA synthetase/AMP-acid ligase II protein [Herbaspirillum sp.
GW103]
Length = 546
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/544 (44%), Positives = 329/544 (60%), Gaps = 20/544 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN LTP+ FI RAA P+II+ W QTYRR +LAS+L G+
Sbjct: 8 LGRNAANYAALTPIDFIARAAAVYGQRPAIIHGALRQDWDQTYRRTRRLASALQRLGVGK 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
VS + PN PAM E HF VPM+GA+ N +N RLDA +I +L+H E+K++ +D ++
Sbjct: 68 NDTVSAMLPNTPAMVEAHFGVPMAGAVLNALNIRLDAESIVFMLRHGEAKVLLIDSEFAA 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD-TYENMLAKGDPQFSW 182
L ++ ++ P L ++ E+ PPP +P F YE +LA GD F W
Sbjct: 128 LAQQL------RAQLPALKIV----EVFDVLGPPP-VPGERFGHLEYEALLADGDENFEW 176
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P + D + LNYT GTT PKGVV ++ + AV ++++W +PK V LWTLPMFH
Sbjct: 177 QWPADEWDAIALNYTSGTTGDPKGVVYHHRGAALNAVSNILEWDLPKHPVYLWTLPMFHC 236
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQL 300
NGW F W A NVCLRKF+ VF LI +HG+TH C APIV L+++PE +
Sbjct: 237 NGWCFPWTVAARAGVNVCLRKFEPKLVFDLIAEHGITHYCAAPIVHAALANAPEGWRANI 296
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
PV+ + AG+PPPA VL + E++ F ++H YG TE+ G CA + +W+ L +RA
Sbjct: 297 RGPVKAMVAGAPPPAAVLAKMEAMQFELTHVYGLTEVYGPAAVCAEQDEWSTLSVDQRAV 356
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
K+RQGVR + V ++ P+T V DG+ GEI+ RG M GYLK+ +AT +
Sbjct: 357 QKSRQGVRYHLQSGVTVLSPDTMEPVAADGEEIGEIMFRGNICMKGYLKNDKATHEAFAG 416
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+G+M+ DGY++IKDRSKD+IISGGENISS E+E VLY HP V AAVV +PD
Sbjct: 417 GWFHTGDLGVMNADGYIKIKDRSKDIIISGGENISSVEVEDVLYRHPAVLAAAVVAQPDE 476
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E PCAFV LK G + TE +CR + + VPK + F LPKT+TGK+Q
Sbjct: 477 KWGETPCAFVELKEGANIDAAELTE-----FCRGHLAGFKVPKAIYF-GPLPKTSTGKIQ 530
Query: 541 KYVL 544
K+ L
Sbjct: 531 KFEL 534
>gi|114767644|ref|ZP_01446362.1| AMP-binding protein [Pelagibaca bermudensis HTCC2601]
gi|114540335|gb|EAU43428.1| AMP-binding protein [Roseovarius sp. HTCC2601]
Length = 541
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/538 (43%), Positives = 329/538 (61%), Gaps = 20/538 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTPL F+ RA D P++IY T+++ + R QLAS+L+ GI PG VV+
Sbjct: 15 ANHVPLTPLSFLRRARQIYPDHPAVIYGPHRKTYAEHHDRVSQLASALTKIGIKPGDVVA 74
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
I PNIPA E HF VP GA+ NTINTRLD TI+ IL H E+KLV D L E
Sbjct: 75 TILPNIPAQAEAHFGVPACGAVLNTINTRLDVDTIAYILDHGEAKLVLCDPQFIPHLAEA 134
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
+ L + PK++ + D + + D+++ YE+ LA GDP+F W+ P+ +
Sbjct: 135 IELM--EQEPPKVIEVADPHGGAKAFG--------DYLE-YEDFLATGDPEFDWIMPEDE 183
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
+ + LNYT GTT PKGVV ++ ++ A+ ++ W + V L +P+FH NGW T
Sbjct: 184 WESLALNYTSGTTGRPKGVVYHHRGAYLNAMGQVLSWRMVLHPVYLTIVPLFHCNGWCHT 243
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDRPVRI 306
W VG T VC R A ++ I GVTH GAPIVLN+L ++PE ++ D V +
Sbjct: 244 WMMPAVGGTVVCCRDITAHNIYDAIADEGVTHFGGAPIVLNMLVNAPEQEKRAFDHAVEV 303
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
TAG+PP L + E++GF V+ YG TE G +V CAW+ W L ERA++KARQG
Sbjct: 304 FTAGAPPAPATLAKIETMGFHVTQVYGLTETYGPDVECAWQAAWEPLQGAERAAMKARQG 363
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
V + V ++D + + + DG+T+GEI+ RG +M GYLK P+AT + + G +++G
Sbjct: 364 VAMPFMEHVTVMDEQMTI-IPADGETKGEIMHRGNGVMKGYLKAPKATREAFEGGYFHSG 422
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+ ++HPD Y++I DR+KD+IISGGENISS E+E+ L H V AVV +PD W E+P
Sbjct: 423 DIAVLHPDSYVQIADRAKDIIISGGENISSVEVENTLMGHEAVLLCAVVAKPDETWGEVP 482
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
CAFV LK G ++G E ++I + R R+ + PK VVF +ELPKT+TGK+QK+ L
Sbjct: 483 CAFVELKPGHEAG-----EAELIAFARERLAGFKTPKKVVF-EELPKTSTGKIQKFQL 534
>gi|402569069|ref|YP_006618413.1| acyl-CoA synthetase [Burkholderia cepacia GG4]
gi|402250266|gb|AFQ50719.1| acyl-CoA synthetase [Burkholderia cepacia GG4]
Length = 550
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 245/548 (44%), Positives = 338/548 (61%), Gaps = 28/548 (5%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTP+ F+ RAA + +I++ TW +TY+R QLAS+L+ G+ G V+
Sbjct: 14 ANYVPLTPIDFLVRAAEVYGERLAIVHGGVRRTWGETYQRARQLASALAQAGVARGETVA 73
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----HLSSSL 124
+ PNIPAM E HF VPM+GA+ NTINTRLD ++ +L+H E+K++ VD L+
Sbjct: 74 ALLPNIPAMVEAHFGVPMAGAVLNTINTRLDISSVLFMLRHGEAKVLIVDTEYAELAHRA 133
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
LEV L K+V + D + + P R A YE +A GDP ++W
Sbjct: 134 ALEVPGL--------KIVSVAD-----AMPADPARFAGAT---DYEAFVAGGDPDYAWTL 177
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
P + D + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPMFH NG
Sbjct: 178 PADEWDAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHAVYLWTLPMFHCNG 237
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLDR 302
W F W A NVCLRKFDA TVF LIR+ +TH CGAPIV + ++++P + +D
Sbjct: 238 WCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERITHYCGAPIVQSAIANAPAEFREGIDH 297
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
V + AG+ P V+ + + +GF + H YG TE+ G CA + W++LP ERA L
Sbjct: 298 TVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAKQAHWDELPDDERARLN 357
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+P+AT + G
Sbjct: 358 ARQGVRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKGYLKNPKATDEAFHGGW 417
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
++TGD+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV PDP W
Sbjct: 418 FHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVAMPDPKW 477
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E+PCAFV L+ G + TE++I+ +C+ + + VPK V F ELPKT+TGK+QK+
Sbjct: 478 GEVPCAFVELREGASA-----TEEEIVAHCKQLLAGFKVPKAVRF-GELPKTSTGKIQKF 531
Query: 543 VLGDIANS 550
L + S
Sbjct: 532 QLRNAVGS 539
>gi|219848475|ref|YP_002462908.1| acyl-CoA synthetase [Chloroflexus aggregans DSM 9485]
gi|219542734|gb|ACL24472.1| AMP-dependent synthetase and ligase [Chloroflexus aggregans DSM
9485]
Length = 549
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/553 (43%), Positives = 330/553 (59%), Gaps = 25/553 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTPL F++R A P++I+ YTW+Q Y R +LAS+L + G+
Sbjct: 9 LDKTAANYVPLTPLSFLKRTAMVYPQLPAVIHGQRRYTWAQVYERVRRLASALRAAGVGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V+V+ N P MYE HF VP SGA+ NTIN RLDA TI+ IL+H E+K++ D +
Sbjct: 69 HDTVAVVLSNTPEMYECHFGVPGSGAVLNTINVRLDAATIAFILEHGEAKVLITDREFAP 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQFS 181
++ + + LV+ DD E + P D + T YE +A GDP F
Sbjct: 129 VVRAALDRI----ERSLLVIDVDDPEYTG---------PGDRLGTVEYEQFIAGGDPAFE 175
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
+ P + + + LNYT GTT+ PKGVV ++ ++ A+ +++ W +P +V LWTLPMFH
Sbjct: 176 LIYPADEWEAITLNYTSGTTANPKGVVYHHRGAYLNALSNIVSWGMPHHAVYLWTLPMFH 235
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP----EA 297
NGW F W A TN+CLRK DA ++ I +H VTH CGAPIV +L++++ A
Sbjct: 236 CNGWCFPWTMAANAGTNICLRKVDAGLIWQAIEEHRVTHYCGAPIVHSLIANNAPAHWRA 295
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
Q V L A +PPP VL +GF ++H YG TE G CA +P W++LP E
Sbjct: 296 GQGTYKVSGLIAAAPPPVAVLQAMAEIGFEITHVYGLTETYGPAAVCAKQPDWHRLPIEE 355
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L RQGV V ++DP T V DGQT GE++ RG +M GYLK+P AT
Sbjct: 356 QARLNGRQGVNYHAEEAVSVLDPVTMQPVPWDGQTMGEVMFRGNIVMKGYLKNPTATEAA 415
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
+DG +++GD+ ++HPDGY++I DR+KD+IISGGENISS E+E LY HP V AAVV
Sbjct: 416 FRDGWFHSGDLAVVHPDGYIKITDRAKDIIISGGENISSIEVEDALYKHPAVLLAAVVAA 475
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PDP W E+P AF+ L+ GM TE+++ Q+CR + Y VPK F LPKT+TG
Sbjct: 476 PDPKWGEVPHAFIELRD-----GMTVTEEELQQHCRKYLAGYKVPKKFTF-GPLPKTSTG 529
Query: 538 KVQKYVLGDIANS 550
K+QKY+L + A S
Sbjct: 530 KIQKYILREQAKS 542
>gi|224084135|ref|XP_002307223.1| predicted protein [Populus trichocarpa]
gi|222856672|gb|EEE94219.1| predicted protein [Populus trichocarpa]
Length = 551
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/555 (41%), Positives = 348/555 (62%), Gaps = 15/555 (2%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSF 59
M+ + PAN PL+P+ F+ERAAT D SI+Y ++ ++W T+ RC+++AS+L
Sbjct: 2 MEGIYHCPANYVPLSPISFLERAATVYGDKVSIVYGSNVRFSWKDTFDRCVKVASALVQL 61
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
I PG +V APN+PA+YELHF VPM+GA+ + +NTRLDA T+++ L+ E+KL+FVD+
Sbjct: 62 KICPGDIVVAFAPNVPALYELHFGVPMAGAVISALNTRLDASTLALALEQLEAKLIFVDY 121
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ ++L+ + L P +++ + + SSS R A +D Y +L G
Sbjct: 122 QFTDVVLKALDLLSQKKVNPPHLVVIPECDKSSSMD---RKHIASDLD-YNCLLEMGRDD 177
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F +RP ++ DP+ +NYT G+T PKGVV ++A ++ ++ + + + + V LWT+ M
Sbjct: 178 FRIIRPNNECDPISVNYTSGSTGKPKGVVYSHRAAYLNSLAEIFRFDMRQMPVFLWTVDM 237
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
F NGW TW A +G TN+CLR A +F + H VTH CG P +LN ++++P
Sbjct: 238 FRCNGWCLTWAMAALGGTNICLRNVSADIIFDAVSLHKVTHFCGPPAILNTIANAPARAS 297
Query: 300 LDRP----VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
P V ++ AGS P + +L + E LGF V HGYG TE G WKP+ +
Sbjct: 298 SQSPFPCSVNVVVAGSLPNSEILTKVEGLGFNVYHGYGMTEALGPATIRPWKPESDSTFE 357
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
E+ ++ R+G+ + L VD+ DP+T SV DG+T GE++ RG LM GYLK E T
Sbjct: 358 IEQEEIRRREGLHNLLLEGVDVKDPKTMESVPNDGKTIGEVMFRGNILMSGYLKSTEITQ 417
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
+ +K G ++TGD+G+ HP+GYL++KDR+KD+IISGGE IS+ E+E+VL SHP V+EAAVV
Sbjct: 418 ETLKGGWFHTGDLGVRHPNGYLQMKDRAKDIIISGGEAISTLEVEAVLLSHPKVSEAAVV 477
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
G+PD E+PCAFV LK G + + ++II++C ++P M+P+T+VF ELP
Sbjct: 478 GQPDALLNEVPCAFVKLKEGFGA-----SAEEIIEFCGDQLPDLMIPRTIVF-GELPVNF 531
Query: 536 TGKVQKYVLGDIANS 550
+GKVQK+ + + N+
Sbjct: 532 SGKVQKFAMRETVNA 546
>gi|296135825|ref|YP_003643067.1| AMP-dependent synthetase and ligase [Thiomonas intermedia K12]
gi|295795947|gb|ADG30737.1| AMP-dependent synthetase and ligase [Thiomonas intermedia K12]
Length = 547
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 246/551 (44%), Positives = 333/551 (60%), Gaps = 19/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PN AN PLTPL F++ AA ++++ W+QT RC +LAS+L G+
Sbjct: 6 LTPNRANHAPLTPLIFLDHAADLYPQRLAVLHGSLQRNWAQTRERCRRLASALVRRGLQR 65
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+V+ PN+P M E HF VPM+G + NT+NTRLDA ++ +L H +K V VD ++
Sbjct: 66 GDVVAVMLPNVPTMVEAHFGVPMAGLVLNTLNTRLDAEALAYMLLHGGAKAVLVDPELAA 125
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQFS 181
++ V+L P LV+ D E +P + T YE +LA+G +
Sbjct: 126 VMQRAVALAVEQGLAPPLVIDVPDPEF---------VPGGQGIGTLNYEALLAEGLASEA 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
+ D + LNYT GTT PKGVV ++ ++ AV ++++W +PK V LWTLPMFH
Sbjct: 177 LPDVADEWDSISLNYTSGTTGKPKGVVYSHRGAYVNAVSNILEWDMPKHPVYLWTLPMFH 236
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A NVCLRK +A +F IR GVTH CGAPIV NLL ++P +
Sbjct: 237 CNGWCFPWTVAARAGVNVCLRKVEAQAIFDRIRSAGVTHYCGAPIVHNLLVNAPAEMRAG 296
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+ VR + AG+ PPA ++ E++GF ++H YG TE+ G CA + W +LP ERA
Sbjct: 297 IHHAVRAMVAGAAPPAALIEGLEAMGFDLTHTYGLTEVYGPATVCAKQESWTELPLPERA 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L ARQGVR + + +T V DGQT GEI+ RG +M GYL +PEAT +
Sbjct: 357 RLNARQGVRYHLQNAATVRNSDTLEEVPHDGQTLGEIMFRGNIMMKGYLGNPEATEQAFH 416
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+ ++ PDGY++IKDRSKDVIISGGENISS E+E VLY HP V AAVV PD
Sbjct: 417 GGWFHSGDLAVVDPDGYIKIKDRSKDVIISGGENISSIEVEDVLYRHPAVLVAAVVAMPD 476
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
P W E PCAFV LK G + TE++II +C+A + + P+ VVF E+PKT+TGK+
Sbjct: 477 PKWGESPCAFVELKQGRTA-----TEEEIIAFCKAHLAGFKTPRKVVF-GEVPKTSTGKI 530
Query: 540 QKYVLGDIANS 550
QKY L A+S
Sbjct: 531 QKYALRAQAHS 541
>gi|218188156|gb|EEC70583.1| hypothetical protein OsI_01787 [Oryza sativa Indica Group]
Length = 606
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/562 (42%), Positives = 346/562 (61%), Gaps = 36/562 (6%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYND------TTYTWSQTYRRCLQLASSLSS-FGI 61
AN PLTP+ F+ER A D +I+ +D + TW T RCL+LA++L+ G+
Sbjct: 36 ANHAPLTPISFLERTALVYPDRLAIVASDGSAGVAVSRTWRDTRARCLRLAAALTGRLGV 95
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VV+V A NIPA+ ELHF VPM+GA+ T+N+RLDA +++L+HSE+K+VFVD
Sbjct: 96 QRHDVVAVFAQNIPAVCELHFGVPMAGAVICTLNSRLDAAMAAVLLRHSEAKVVFVDRAL 155
Query: 122 SSLLLEVVSLFPPH-SKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENML----AKG 176
+ + + L ++ P LVLI++ + + S P +I YE++L A
Sbjct: 156 LGVAQKALVLVAEAGARRPVLVLISELLDENERSPPDAKIKVTRVDYEYEHLLSAAAAGS 215
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
P F+ P + +P+ LNYT GTTS PKGV+ ++ ++ ++ ++I + + V LWT
Sbjct: 216 SPDFAIRWPADENEPIALNYTSGTTSRPKGVIYSHRGAYLSSLAAVIVNAMAETPVYLWT 275
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
+PMFH NGW WG A G TNVC+R+ A +F + +HGVTHM GAP VL+++ ++
Sbjct: 276 VPMFHCNGWCQVWGVAAQGGTNVCVRRVTAAAIFDSVARHGVTHMGGAPTVLSMIVNATA 335
Query: 297 AKQLDRP------VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKW 350
++ +P V ++T G+PPP VL R E GF+V H YG TE G C WKP+W
Sbjct: 336 DERRRQPGGRRRRVTVMTGGAPPPPQVLFRMEEQGFLVIHSYGLTETYGPATVCTWKPEW 395
Query: 351 NKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKD 410
+ L A ERA +K+RQG+ +GL D+ DP T SV DG+T GE+++RG ++M GY KD
Sbjct: 396 DALTAEERARIKSRQGLHHVGLEAADVKDPATMRSVPADGRTVGEVMLRGNTVMSGYYKD 455
Query: 411 PEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVN 470
AT++ + G +GD+ + DGY++I DRSKD+IISGGENIS+ E+E+ L+ HP V
Sbjct: 456 GGATAEALAGGWLRSGDLAVREEDGYIKILDRSKDIIISGGENISTVEVEAALFGHPAVE 515
Query: 471 EAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFI-D 529
EAAVVGRPD +W G +++++ +CRAR+PRYM P+TVV + +
Sbjct: 516 EAAVVGRPDEYW-----------------GERRAQEELMAFCRARLPRYMAPRTVVVVEE 558
Query: 530 ELPKTATGKVQKYVLGDIANSM 551
ELPKTATGKVQK L + A +M
Sbjct: 559 ELPKTATGKVQKVALRERAKAM 580
>gi|421496250|ref|ZP_15943486.1| AMP-binding protein [Aeromonas media WS]
gi|407184742|gb|EKE58563.1| AMP-binding protein [Aeromonas media WS]
Length = 540
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/545 (44%), Positives = 339/545 (62%), Gaps = 24/545 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN LTPL F+ RAA D P++I+ +W+QT RC +LAS+L GI
Sbjct: 11 LEKTAANFEALTPLSFLARAARVYPDYPALIHGPLRQSWAQTEVRCRRLASALRRRGIGE 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS++APN+PAM+E HF VPMSGA+ NTINTRLDA++++ I +H++S++V VD +
Sbjct: 71 GDTVSIVAPNVPAMFEAHFGVPMSGAVLNTINTRLDAQSMAFIFQHAQSRVVLVDREFGA 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD--TYENMLAKGDPQFS 181
++ + +SL + LV+ DD P + V TYE +A GD Q
Sbjct: 131 VVRKALSLI----DSQPLVIAIDD----------PTYLEGELVGELTYEAFVATGDEQEP 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
P + + LNYT GTT PKGVV ++ + A+++++ W +PK V LWTLPMFH
Sbjct: 177 GWLPADEWQAISLNYTSGTTGNPKGVVYHHRGAHLNAINNVLSWELPKHPVYLWTLPMFH 236
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL- 300
NGW F W A +VCLR A ++ + +H V+H C APIVLN+L+++ A +L
Sbjct: 237 CNGWCFPWTLAATAGVSVCLRHVQAGAIYEALHEHRVSHFCAAPIVLNMLNNADPALKLG 296
Query: 301 -DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
P++ +TAG+ PPA V+ E++G V+H YG TE G V C + W A +
Sbjct: 297 LSHPIKAMTAGAAPPATVIAGMEAMGIAVTHVYGLTETYGPCVVCEPQRNWQGQDATALS 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKARQGV + E+ + +P +G V RDG+T GEI +RG +M GYLK+P A+ + M
Sbjct: 357 RLKARQGVASPLQGEMRVANPVSGEPVPRDGKTLGEIFLRGNIVMKGYLKNPAASDEAMA 416
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
DG + +GD+ + HPDGY+EIKDRSKD+IISGGENISS E+E VLY HP V+EAAV+ PD
Sbjct: 417 DGWFRSGDLAVWHPDGYVEIKDRSKDIIISGGENISSLEVEDVLYRHPDVDEAAVIAMPD 476
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+PCAFV LK G + ++ ++I +CR ++ + PK ++F LPKT+TGKV
Sbjct: 477 EKWGEVPCAFVKLKEGR-----VLSQAELIAFCREQMAHFKAPKRIIFTP-LPKTSTGKV 530
Query: 540 QKYVL 544
QK++L
Sbjct: 531 QKFML 535
>gi|91762622|ref|ZP_01264587.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Candidatus
Pelagibacter ubique HTCC1002]
gi|91718424|gb|EAS85074.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Candidatus
Pelagibacter ubique HTCC1002]
Length = 542
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/551 (42%), Positives = 340/551 (61%), Gaps = 18/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PL+PL F+ER + +++Y +YTW + Y+RC++ AS+L G+
Sbjct: 8 LDKNEANYVPLSPLTFLERTKDIYPNYEALVYESRSYTWEEVYKRCVKFASALDKLGVKT 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS++A N P ++E H+++PM GA+ N INTRLD TIS IL+HS++K++ VD
Sbjct: 68 GDTVSIMAFNTPEIFEAHYSIPMVGAVINAINTRLDPNTISYILQHSDAKVLIVDRQ--- 124
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+V+ + K ++ DD++I +SS RI + YE+ L G+ + W
Sbjct: 125 -FHDVIEKALKNVKNKITIIDIDDQDIDTSSFK--RIGELE----YESFLNTGNENYEWK 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
+PK + + + L YT GTT PKGVV ++ +++A S+ W +P + L +PMFH N
Sbjct: 178 KPKDEWEAISLGYTSGTTGNPKGVVYHHRGSYLMATGSVTAWNMPNKLNFLCVVPMFHCN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW + W A++ A +CLR D +F LI K+ VTH GAPIVLN++ ++P+ Q L
Sbjct: 238 GWCYPWTLAMLHARVICLRNIDVKKMFELIDKYEVTHFGGAPIVLNMIVNAPKEDQKALK 297
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R V +LTAG+PPP+ + + E+LGF V H YG TE G + CAW WN L ++ +
Sbjct: 298 RKVNVLTAGAPPPSIIFEKMENLGFEVMHVYGLTETYGHMLQCAWNDDWNSLEKDKKNEI 357
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR ++DPET +DG+T GEI++RG +M GY KD EAT K M G
Sbjct: 358 KARQGVRYPNTEGAIVMDPETMKPAPKDGKTMGEIMIRGNIVMKGYYKDKEATDKSMAGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+ + HPDGY++I+DRSKD+IISGGENISS EIE+ + HP V+ AAVV +PD
Sbjct: 418 WFHSGDLAVTHPDGYIKIQDRSKDIIISGGENISSIEIENAIAKHPSVSLAAVVAKPDEK 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV L + TEK+II +CR + + +PK+V+F D LPKT+TGK+QK
Sbjct: 478 WGETPCAFVELIEDKPA-----TEKEIIDFCRETLAGFKLPKSVIFCD-LPKTSTGKIQK 531
Query: 542 YVLGDIANSMS 552
+ L +S
Sbjct: 532 FELRKKVKELS 542
>gi|421854944|ref|ZP_16287327.1| putative acyl-CoA synthetase [Acinetobacter radioresistens DSM 6976
= NBRC 102413]
gi|403189605|dbj|GAB73528.1| putative acyl-CoA synthetase [Acinetobacter radioresistens DSM 6976
= NBRC 102413]
Length = 547
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/554 (43%), Positives = 346/554 (62%), Gaps = 18/554 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L PAN L+PL ++ERAA +II+ +W +TY+RC Q A L GI
Sbjct: 6 DELPRTPANFVALSPLRYLERAAYIYPHQAAIIHGSRQISWRETYQRCRQFADQLQKLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VS + PN+PAM E HFAVPM+GA+ NT+NTRLDA+T++ +L+H+ESK++ VD
Sbjct: 66 QKNDTVSALLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTLAFMLEHAESKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
S+L E + L S+ ++ + D + + ++P I YE+ L +G+ F
Sbjct: 126 STLAKEALGLV---SQDIYVIDVDDAEYENCFNAPIGEI-------EYEDWLTEGNADFE 175
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P+ + D + LNYT GTT PKGVV ++ +I A ++I + ++ LWTLP+FH
Sbjct: 176 WHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYINAASNIIACGMTPRATYLWTLPLFH 235
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A G TNVCLRK D +F LI +H V + CGAPIVL++L ++P K+
Sbjct: 236 CNGWCFAWTMAANGGTNVCLRKVDPELIFKLIAEHKVDYFCGAPIVLSMLINTPAEKRTY 295
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
D V ++ AG+ PPA ++ ++G V+H YG TE G + CA + W+ L +E+A
Sbjct: 296 FDHRVEVMVAGAAPPAAIIEGMRNIGINVTHVYGLTETYGPSALCASQAGWSDLTIQEQA 355
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L +RQGV + ++DPET L V DGQ+ GEI+ RG +M GYLK+PEAT++ K
Sbjct: 356 QLHSRQGVPYPLQDGMKVLDPETMLPVPNDGQSMGEIMFRGNIVMKGYLKNPEATAEAFK 415
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+ + PDGY +I DR+KDVIISGGENISS E+E VLY HP V AAVV +PD
Sbjct: 416 GGWFHTGDLAVCQPDGYAKITDRAKDVIISGGENISSLEVEEVLYQHPAVLTAAVVAKPD 475
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
P WQE+PCAFV LK G+ + +++ ++C+ + R+ VPK ++ D +PKT+TGK+
Sbjct: 476 PRWQEVPCAFVELKE-----GISISAEELTEHCKQGLARFKVPKEIIITD-IPKTSTGKL 529
Query: 540 QKYVLGDIANSMSM 553
QK++L + A S+
Sbjct: 530 QKFILREWAKERSV 543
>gi|393767207|ref|ZP_10355757.1| AMP-dependent synthetase and ligase [Methylobacterium sp. GXF4]
gi|392727304|gb|EIZ84619.1| AMP-dependent synthetase and ligase [Methylobacterium sp. GXF4]
Length = 545
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/553 (43%), Positives = 337/553 (60%), Gaps = 24/553 (4%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+DR+ PAN PLTPL ++ERAA D ++I+ T+ + Y R +LAS+L+ G
Sbjct: 11 LDRV---PANHQPLTPLLYLERAAQVFPDQVAVIHGGLRRTYRELYARSRRLASALARRG 67
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ G V+ + N P M E H+ VPM+GA+ NT+NTRLDA I L+H E+K++ D
Sbjct: 68 LGRGDTVAALLANTPEMIECHYGVPMTGAVLNTLNTRLDAAAIRFCLQHGEAKVLITDRE 127
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT-YENMLAKGDPQ 179
+ + P V+ DD + P A +T YE LA+GDP
Sbjct: 128 FARTAAAALEGLEPKP----FVIDVDDPDYDG--------PGARLGETAYEAFLAQGDPA 175
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
W P + D + LNYT GTT PKGVV ++ ++A+ ++I + + V LWTLPM
Sbjct: 176 HDWALPGDEWDAITLNYTSGTTGDPKGVVYHHRGAALLALGNVITGALGQHPVYLWTLPM 235
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W ++V T+VCLR+ A ++ L+ +HGVTH+CGAPIV+ +L ++P+A++
Sbjct: 236 FHCNGWCFPWTLSIVAGTHVCLRQVRAEAMYRLMAEHGVTHLCGAPIVMQMLINAPDAER 295
Query: 300 LDRPVRI--LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
D P R+ TA +PPP VL GF V+H YG TE G V AW W+ L A +
Sbjct: 296 RDLPRRVAFFTAAAPPPEAVLAGMSEAGFDVTHLYGLTESYGPAVVNAWNADWDALAADQ 355
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
RA+ KARQGVR L +D+ DP+T V DG T GE++MRG +M GYLK+P+AT
Sbjct: 356 RAAKKARQGVRYPVLEALDVRDPDTMAPVPADGTTIGEVMMRGNVVMRGYLKNPKATQAA 415
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
+ G + TGD+G+ HPDGY+++KDRSKD+IISGGENISS E+E L+ HP V+ AAVV +
Sbjct: 416 FRGGWFRTGDLGVRHPDGYIQLKDRSKDIIISGGENISSIEVEDALFKHPAVSAAAVVAK 475
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD W E PCAFV LK G + ++IQ+CR R+ Y +P+ V+F ELPKT+TG
Sbjct: 476 PDAKWGETPCAFVELKPGASP-----SADELIQWCRGRLAAYKLPRHVIF-GELPKTSTG 529
Query: 538 KVQKYVLGDIANS 550
KVQK++L + A
Sbjct: 530 KVQKFILRERARQ 542
>gi|414864659|tpg|DAA43216.1| TPA: putative AMP-dependent synthetase and ligase superfamily
protein [Zea mays]
Length = 762
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/491 (48%), Positives = 322/491 (65%), Gaps = 27/491 (5%)
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V+V++PN+PAMYELHFAVPM+GA+ T+NTR DA +S++LKHS +K+ V+ S LL
Sbjct: 281 VAVLSPNVPAMYELHFAVPMAGAVLCTLNTRHDAAMVSVLLKHSGAKVFLVE----SNLL 336
Query: 127 EVVSLFPPHSKTPKLVLITDDKEISSSSSPPP--RIPPADFVDTYENMLAKGDPQFSWVR 184
+V + +L E +S+++ P I D YE+++ G +F
Sbjct: 337 DV-----GRAAMKRLA------ESNSAAALPVLLTISDDTDSDDYEDLVRNGPARFDIRW 385
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
P +LDP+ LNYT GTTS PKGVV ++ ++ + +++ + + LWT+PMFH NG
Sbjct: 386 PADELDPIALNYTSGTTSRPKGVVYSHRGAYLNTIATVLAYDITAMPTYLWTVPMFHCNG 445
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLS----SSPEAKQL 300
W+ WG A+ G TNVCLR F +F I +HGVTHM GAP VLN+++ ++ E K L
Sbjct: 446 WNLPWGVAMQGGTNVCLRHFTGEVIFDSITRHGVTHMGGAPTVLNMMANARTATAERKPL 505
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
PVR++T G+PPP VL E LGF+V YG TE G C W P+W+ LPA ERA
Sbjct: 506 PWPVRVMTGGAPPPPRVLFAVEELGFVVYQIYGLTETYGPATVCTWMPEWDALPAEERAR 565
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
LKARQG + + +VD+++P T SV DGQT GE++ RG ++M GY KD +AT + M
Sbjct: 566 LKARQGFHHVAMQDVDVMNPSTMESVPHDGQTVGEVMFRGNTVMSGYYKDLKATKESMAG 625
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +TGD+ + HPDGY++IKDR+KD+IISGGENISS E+ESV++SHP V EAAVV RPD
Sbjct: 626 GWLHTGDLAVRHPDGYIQIKDRAKDIIISGGENISSIEVESVIFSHPAVLEAAVVARPDH 685
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E PCAFV LK G + TE +II +CR ++P YM PKTVVF ++LPKT+TGK Q
Sbjct: 686 HWGETPCAFVKLKDGASA-----TEAEIINFCREKLPHYMAPKTVVF-EDLPKTSTGKTQ 739
Query: 541 KYVLGDIANSM 551
K+VL D A +M
Sbjct: 740 KFVLRDKARAM 750
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 3/62 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSS-FGINPG--H 65
AN PL+P+ FIERAA P+++Y D +TW++T RCL++A++L++ FGI G H
Sbjct: 104 ANHAPLSPISFIERAAAVYGARPAVVYGDRRHTWAETRGRCLRVAAALATRFGIARGDVH 163
Query: 66 VV 67
VV
Sbjct: 164 VV 165
>gi|148260199|ref|YP_001234326.1| AMP-dependent synthetase and ligase [Acidiphilium cryptum JF-5]
gi|146401880|gb|ABQ30407.1| AMP-dependent synthetase and ligase [Acidiphilium cryptum JF-5]
Length = 652
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/554 (45%), Positives = 344/554 (62%), Gaps = 28/554 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN L+PL F+ R A + ++++ TW++T+ RC +L ++L++ GI P
Sbjct: 119 LEKTEANYQALSPLSFLARTAKVWPERTAVVHGSIRRTWAETFERCKRLGAALAARGIGP 178
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH---- 119
G VV+V+APNIPAM E HF V M+GA+ NT+NTRLDA TI+ IL+H E+KL+ D
Sbjct: 179 GDVVAVMAPNIPAMVEAHFGVAMAGAVLNTLNTRLDAPTIAYILRHGEAKLLLSDTEFAP 238
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ ++ L E+ PP V+ DD E + R+ D YE+ LA G
Sbjct: 239 VIAAALAELSDNAPP-------VIDIDDPEGPGGA----RLGAMD----YEDFLATGTAD 283
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P + + LNYT GTT PKGVV ++ ++ + + I W + + V LWTLPM
Sbjct: 284 FDWRFPDDEWSAIALNYTSGTTGKPKGVVYHHRGAYLNGLGNAITWNMRQHPVYLWTLPM 343
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W + T+VCLR+ DA ++ A + +HGVTH+CGAP+++N++ ++PE ++
Sbjct: 344 FHCNGWCFPWTITALAGTHVCLRRIDAASIAAAVERHGVTHLCGAPVIMNMMINAPEPQR 403
Query: 300 L---DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
R V ++TAG+PPPA V+ E LG ++H YG TE G CAW+ WN PA
Sbjct: 404 AVYAGRGVAMMTAGAPPPAAVIEAMEGLGVDLTHVYGLTETYGPVTYCAWQEDWNGRPAA 463
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
ERA+L+ARQGV + DP T V DG T GE+ +RG +M+GYLKD AT K
Sbjct: 464 ERAALRARQGVTYAVEEGAMVADPATRAPVPADGTTMGEVFLRGNIVMMGYLKDAAATEK 523
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
G + TGD+G+MHPDGY+E+KDRSKD+IISGGENIS+ EIE+VLY HP V EAAVV
Sbjct: 524 SFAGGWFATGDLGVMHPDGYIELKDRSKDIIISGGENISTIEIETVLYRHPAVMEAAVVA 583
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
PD W E+PCAFV L+ M T ++II +CR + + PK +VF ELPKT+T
Sbjct: 584 APDEKWGEVPCAFVVLRP-----DMTATAEEIIAFCRQNMAHFKAPKRIVF-SELPKTST 637
Query: 537 GKVQKYVLGDIANS 550
GK+QKYVL + A +
Sbjct: 638 GKIQKYVLRERARA 651
>gi|254563500|ref|YP_003070595.1| AMP-dependent synthetase/acyl-CoA ligase [Methylobacterium
extorquens DM4]
gi|254270778|emb|CAX26783.1| putative AMP-dependent synthetase/acyl-CoA ligase [Methylobacterium
extorquens DM4]
Length = 545
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/549 (45%), Positives = 346/549 (63%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PNPAN PLTPL +++RAA D ++I+ +++ Y RC +LA++L++ GI
Sbjct: 11 LDPNPANFQPLTPLTYLDRAARTFPDRVAVIHGPLRRSYADLYARCRRLAAALAARGIGR 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ N PAM E H+ VPM+GA+ NT+NTRLDA ++ L H E+K+ VD +
Sbjct: 71 GDTVAVLLANTPAMIECHYGVPMTGAVLNTLNTRLDAAALAFCLDHGEAKVFIVDREFAR 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ E + + LV+ DD E + S+P + D YE+ LA GDP F W
Sbjct: 131 IGREALD----KAGVSPLVIDYDDPEFTGDSAP---VGETD----YEDFLAAGDPDFDWA 179
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++++ ++I +P+ +V LWTLPMFH N
Sbjct: 180 MPGDEWDAISLNYTSGTTGDPKGVVYHHRGAALLSLGNVITAGLPQHAVYLWTLPMFHCN 239
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W ++V T+VCLR+ AP ++A + +HGVTH+ GAPIV++ L ++PEA++ L
Sbjct: 240 GWCFPWTLSIVAGTHVCLRQVRAPAMYAALAEHGVTHLSGAPIVMSTLLNAPEAQKRPLP 299
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R V LTA +PPP VL GF V+H YG TE G V AW W+ L E+A
Sbjct: 300 RRVHFLTAAAPPPEAVLAAMGEAGFDVTHLYGLTETYGPAVVNAWHEDWDALSRDEQARK 359
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L +D+ DPET S+ DG + GE++ RG +M GYLK+P +T K G
Sbjct: 360 KARQGVRYPVLEGLDVRDPETMESLPADGTSLGEVMFRGNVVMRGYLKNPASTEAAFKGG 419
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GD+G+ HPDGY+++KDRSKD+IISGGENISS E+E L+ HP V AAVV +PD
Sbjct: 420 WFRSGDLGVKHPDGYIQLKDRSKDIIISGGENISSIEVEDALFKHPAVAAAAVVAKPDAK 479
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF+ LK G ++ T +++I +CR R+ Y +P+ VVF ELPKT+TGKVQK
Sbjct: 480 WGETPCAFIELKEGREA-----TSEELIAWCRERLAPYKLPRHVVF-GELPKTSTGKVQK 533
Query: 542 YVLGDIANS 550
+VL + A
Sbjct: 534 FVLREKARE 542
>gi|218532428|ref|YP_002423244.1| AMP-dependent synthetase and ligase [Methylobacterium extorquens
CM4]
gi|218524731|gb|ACK85316.1| AMP-dependent synthetase and ligase [Methylobacterium extorquens
CM4]
Length = 543
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/549 (45%), Positives = 346/549 (63%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PNPAN PLTPL +++RAA D ++I+ +++ Y RC +LA++L++ GI
Sbjct: 11 LDPNPANFQPLTPLTYLDRAARTFPDRVAVIHGPLRRSYADLYARCRRLAAALAARGIGR 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ N PAM E H+ VPM+GA+ NT+NTRLDA ++ L H E+K+ VD +
Sbjct: 71 GDTVAVLLANTPAMIECHYGVPMTGAVLNTLNTRLDAAALAFCLDHGEAKVFIVDREFAR 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ E + + LV+ DD E + S+P + D YE+ LA GDP F W
Sbjct: 131 VGREALD----KAGVSPLVIDYDDPEFTGDSAP---VGETD----YEDFLAAGDPDFDWA 179
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++++ ++I +P+ +V LWTLPMFH N
Sbjct: 180 MPGDEWDAISLNYTSGTTGDPKGVVYHHRGAALLSLGNVITAGLPQHAVYLWTLPMFHCN 239
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W ++V T+VCLR+ AP ++A + +HGVTH+ GAPIV++ L ++PEA++ L
Sbjct: 240 GWCFPWTLSIVAGTHVCLRQVRAPAMYAALAEHGVTHLSGAPIVMSTLLNAPEAQKRPLP 299
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R V LTA +PPP VL GF V+H YG TE G V AW W+ L E+A
Sbjct: 300 RRVHFLTAAAPPPEAVLAAMGEAGFDVTHLYGLTETYGPAVVNAWHEDWDALSRDEQARK 359
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L +D+ DPET S+ DG + GE++ RG +M GYLK+P +T K G
Sbjct: 360 KARQGVRYPVLEGLDVRDPETMASLPADGTSLGEVMFRGNVVMRGYLKNPASTEAAFKGG 419
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GD+G+ HPDGY+++KDRSKD+IISGGENISS E+E L+ HP V AAVV +PD
Sbjct: 420 WFRSGDLGVKHPDGYIQLKDRSKDIIISGGENISSIEVEDALFKHPAVAAAAVVAKPDAK 479
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK G ++ T ++++ +CR R+ Y +P+ VVF ELPKT+TGKVQK
Sbjct: 480 WGETPCAFVELKEGREA-----TSEELVAWCRERLAPYKLPRHVVF-GELPKTSTGKVQK 533
Query: 542 YVLGDIANS 550
+VL + A
Sbjct: 534 FVLREKARE 542
>gi|163853568|ref|YP_001641611.1| AMP-dependent synthetase and ligase [Methylobacterium extorquens
PA1]
gi|163665173|gb|ABY32540.1| AMP-dependent synthetase and ligase [Methylobacterium extorquens
PA1]
Length = 543
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/549 (45%), Positives = 347/549 (63%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PNPAN PLTPL +++RAA D ++I+ +++ Y RC +LA++L++ GI
Sbjct: 11 LDPNPANFQPLTPLTYLDRAARTFPDRVAVIHGPLRRSYADLYARCRRLAAALAARGIGR 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ N PAM E H+ VPM+GA+ NT+NTRLDA ++ L H E+K+ VD +
Sbjct: 71 GDTVAVLLANTPAMIECHYGVPMTGAVLNTLNTRLDAGALAFCLDHGEAKVFIVDREFAR 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ E + + LV+ DD E + S+P + D YE++LA GDP F W
Sbjct: 131 IGREALD----KAGVSPLVIDYDDPEFTGDSAP---VGETD----YEDVLAAGDPDFDWA 179
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++++ ++I +P+ +V LWTLPMFH N
Sbjct: 180 MPSDEWDAISLNYTSGTTGDPKGVVYHHRGAALLSLGNVITAGLPQHAVYLWTLPMFHCN 239
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W ++V T+VCLR+ AP ++A + +HGVTH+ GAPIV++ L ++PEA++ L
Sbjct: 240 GWCFPWTLSIVAGTHVCLRQVRAPAMYAALAEHGVTHLSGAPIVMSTLLNAPEAQKRPLP 299
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R V LTA +PPP VL GF V+H YG TE G V AW W+ L E+A
Sbjct: 300 RRVHFLTAAAPPPEAVLAAMGEAGFDVTHLYGLTETYGPAVVNAWHEDWDALSRDEQARK 359
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L +D+ DPET S+ DG + GE++ RG +M GYLK+P +T K G
Sbjct: 360 KARQGVRYPVLEGLDVRDPETMESLPADGTSLGEVMFRGNVVMRGYLKNPASTEAAFKGG 419
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GD+G+ HPDGY+++KDRSKD+IISGGENISS E+E L+ HP V AAVV +PD
Sbjct: 420 WFRSGDLGVKHPDGYIQLKDRSKDIIISGGENISSIEVEDALFKHPAVAAAAVVAKPDAK 479
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK G ++ T ++++ +CR R+ Y +P+ VVF ELPKT+TGKVQK
Sbjct: 480 WGETPCAFVELKEGREA-----TSEELVAWCRERLAPYKLPRHVVF-GELPKTSTGKVQK 533
Query: 542 YVLGDIANS 550
+VL + A
Sbjct: 534 FVLREKARE 542
>gi|84516538|ref|ZP_01003897.1| probable AMP-binding protein [Loktanella vestfoldensis SKA53]
gi|84509574|gb|EAQ06032.1| probable AMP-binding protein [Loktanella vestfoldensis SKA53]
Length = 552
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/551 (42%), Positives = 341/551 (61%), Gaps = 19/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PLTPL F++RAA+ + +I++ +++ Y R QLAS+L+ GI
Sbjct: 10 LDRNPANHIPLTPLTFLDRAASVFPNHIAIVHGALRRNYAEFYMRSRQLASALAQNGIGR 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS + N PAM E H+ VPMSG + +++NTRLDA I+ L H+ SK+V VD
Sbjct: 70 GDTVSAMLANTPAMLECHYGVPMSGGVLHSVNTRLDASVIAFQLDHAMSKVVIVDREFMP 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L+ + ++L + TP+ V+ DD E ++ A Y L+ GDP F W+
Sbjct: 130 LIEKALALA---NVTPR-VIQYDDPEFPGPAT-------ATEAQDYNAFLSTGDPDFDWL 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + +NYT GTT PKGVV ++ +++A + + + K +V LWTLPMFH N
Sbjct: 179 MPLDEWDAIAINYTSGTTGDPKGVVSHHRGAYLLAQGNALTTSMAKHAVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W + + T+VCLR+ ++A + GVTH+CGAPIV++L+ S+ +A++ D
Sbjct: 239 GWCFPWTLSAIVGTHVCLRQVRPEPIWAALADEGVTHLCGAPIVMSLIISAHQAEKRTFD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ TA +PPP +L ++ GF V+H YG TE G V W +W+ LP E+A+L
Sbjct: 299 HQVQFFTAAAPPPEKLLADMKTAGFDVTHLYGLTETYGPAVVNDWHHEWSDLPLAEQATL 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR + L +D++DPET L V RDG+T GE++ RG +M GY ++P+AT + G
Sbjct: 359 KSRQGVRYLPLEGLDVLDPETMLPVPRDGETMGEVMFRGNVVMKGYFRNPKATQQAFAGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G+ +PDGY+++KDRSKD+IISGGENISS E+E LY HP V AAVV P
Sbjct: 419 WFHSGDLGVRYPDGYIQLKDRSKDIIISGGENISSIEVEEALYRHPAVKTAAVVAMPHEK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV L TG D + +C+ + Y VP VVF+ E+P+T+TGK+QK
Sbjct: 479 WGETPCAFVELSTGAD-----VDAATLRAWCKDWLAPYKVPSMVVFM-EIPRTSTGKIQK 532
Query: 542 YVLGDIANSMS 552
Y+L + A +++
Sbjct: 533 YMLREHAKTLA 543
>gi|302768957|ref|XP_002967898.1| hypothetical protein SELMODRAFT_440085 [Selaginella moellendorffii]
gi|300164636|gb|EFJ31245.1| hypothetical protein SELMODRAFT_440085 [Selaginella moellendorffii]
Length = 535
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/551 (45%), Positives = 340/551 (61%), Gaps = 38/551 (6%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+PL F+ERAA P++IYN +TWSQ +RC +LAS+L GI PG VV+
Sbjct: 6 ANYAPLSPLVFLERAAQIHPQRPAVIYNSRRFTWSQELQRCRRLASALRRRGIGPGDVVA 65
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----HLSSSL 124
V+APN+PAMYE+ F VPM+ A+ N +N RLD RT++ + HS K V VD HL S
Sbjct: 66 VVAPNVPAMYEVQFGVPMASAVLNCVNIRLDQRTVATLFHHSGVKAVLVDEEFLHLISGA 125
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
L + + + P +V+I D+ +S PP YE+ L +GDP F W R
Sbjct: 126 LRDWTAKAGTLFQAPFVVVIRDEFFQGMENSWPPG------SSDYEDFLREGDPSFEWSR 179
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
P+ + + + ++YT GTT++PKGV+ ++ ++ A+ + W + + LWTLP+FH NG
Sbjct: 180 PEDETETISVSYTSGTTASPKGVMLTHRGAYLSALSECVTWEMKHGCIYLWTLPLFHCNG 239
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR-- 302
W F W A + TN+CLR+ A +FA I +H VT+ C AP VL+ + S+ R
Sbjct: 240 WCFPWAVAALAGTNICLRQVTAKGIFAAIAEHNVTNFCAAPTVLSTIISAATGSTFSRLQ 299
Query: 303 --PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
VRI+TAG+ PPA VL + E+LGF V+H YG TE G A
Sbjct: 300 HRQVRIMTAGAAPPAAVLAKIEALGFHVTHVYGLTETYG-------------------AR 340
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
LKARQGV+ +GL + +++ ET V +DG T GE+ MRG + GYL +PEAT + +
Sbjct: 341 LKARQGVKYVGLDGLQVLNSETLEPVAKDGVTIGEVCMRGNMVFKGYLNNPEATLESFRG 400
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +++GD+ + HPDGY+EIKDR+KD+IISGGENISS E+ES+LY HP V EAAVV RPD
Sbjct: 401 GWFHSGDLAVWHPDGYIEIKDRAKDIIISGGENISSLEVESILYRHPAVLEAAVVARPDE 460
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E PCAFVSLK G S E++I+ +CR +P++MVPK+VV + L KTATGK+Q
Sbjct: 461 KWGESPCAFVSLKYGVRS-----NEEEILSFCRQHLPKFMVPKSVVILAALDKTATGKIQ 515
Query: 541 KYVLGDIANSM 551
K VL A +
Sbjct: 516 KQVLRSKARAF 526
>gi|445420824|ref|ZP_21435646.1| AMP-binding enzyme [Acinetobacter sp. WC-743]
gi|444758391|gb|ELW82891.1| AMP-binding enzyme [Acinetobacter sp. WC-743]
Length = 548
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/554 (43%), Positives = 346/554 (62%), Gaps = 17/554 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L PAN L+PL ++ERAA D +I++ +W +TY+RC Q A L + GI
Sbjct: 6 DELPRTPANFVALSPLRYLERAAYIYPDQDAIVHGHRHISWRETYQRCRQFAHQLRNLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PNIPAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 EKNDTVSVLLPNIPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
++L E V + + + + DK S+S RI + YE L GD F
Sbjct: 126 ATLAQEAVGMLSQNIYIIDVADVEYDKNDSTS-----RIGQIE----YEQWLQGGDTDFE 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P+ + D + LNYT GTT PKGVV ++ +I A ++I + + LWTLP+FH
Sbjct: 177 WHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYINAASNIIACGMAPRCKYLWTLPLFH 236
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD 301
NGW F W A G TN+CLRK D V+ LI ++ V + CGAPIVL++L ++P+ KQ+
Sbjct: 237 CNGWCFAWTIAANGGTNICLRKIDPELVYQLIDQYKVDYFCGAPIVLSMLINTPKDKQIK 296
Query: 302 --RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
V ++ AG+ PPA ++ +G V+H YG TE G + CA + W+ L +E+A
Sbjct: 297 FKHHVEVMVAGAAPPAAIIEGMHHIGVQVNHVYGLTETYGPSALCASQAGWSDLSIQEQA 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L +RQGV + ++D ET V DG+T GEI+ RG +M GYLK+ +AT + K
Sbjct: 357 QLHSRQGVPYPLQDGMRVLDAETMQPVPNDGKTMGEIMFRGNIVMKGYLKNTQATEEAFK 416
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+ + PDGY +I DRSKD+IISGGENISS E+E +LY+HP + AAVV +PD
Sbjct: 417 GGWFHTGDLAVCQPDGYAKIMDRSKDIIISGGENISSLEVEEILYTHPAIMTAAVVAQPD 476
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
P WQE+PCAF+ LK G + TT +++I++C+ + R+ VPK+VV I E+PKT+TGK+
Sbjct: 477 PRWQEVPCAFIELKQGAE-----TTPEEVIEFCKQHLARFKVPKSVV-ICEIPKTSTGKL 530
Query: 540 QKYVLGDIANSMSM 553
QK++L D A ++
Sbjct: 531 QKFILRDWAKERAV 544
>gi|407697928|ref|YP_006822716.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
gi|407255266|gb|AFT72373.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
Length = 542
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/551 (43%), Positives = 338/551 (61%), Gaps = 25/551 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PN AN LTPL F+ R A A ++I+ TW +T++RCL+LAS+L + G+ P
Sbjct: 11 LTPNAANFSALTPLTFLARTALAHPYRTAVIHGPLRRTWGETHQRCLRLASALRAMGVGP 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD---HL 120
G V+ + PN+P M ELHFAVPM GA+ NT NTRLDA +++ +L H ++K+ F D H
Sbjct: 71 GDTVAALLPNVPEMLELHFAVPMLGAVLNTQNTRLDAASMAFMLDHGQAKVFFTDAEFHE 130
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S L S+ P LV+ +D R+ T++ ++A+G F
Sbjct: 131 RSREALSRCSVSP-------LVVDVEDPTFEGGE----RVGEL----TFDELMARGRDDF 175
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+W P + + LNYT GTT PKGVV ++ ++ A+ ++I +P+ + LWTLPMF
Sbjct: 176 TWQAPADEWQAITLNYTSGTTGDPKGVVYHHRGAYLNALSNIIGLGLPQGAAYLWTLPMF 235
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ- 299
H NGW F W V T+VCLR+ +F I +H VTH C AP+VLN++ ++PE ++
Sbjct: 236 HCNGWCFPWAVTAVAGTHVCLRQPHPEPIFRAISEHKVTHFCAAPVVLNMMINAPEEQRR 295
Query: 300 -LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
D V + T G+ PPA + E LG + H YG TE G ++ C ++ W L E+
Sbjct: 296 PFDHTVTVATGGAAPPAATIAAMEKLGINIVHLYGLTETYGPSLVCEFQDPWADLSLEEK 355
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A ARQG+ ++ +T++ + +P+T V RDG T GE+ +RG S+M GYL +P+ T K
Sbjct: 356 ADKVARQGILSLSMTDMMVANPDTLTPVPRDGSTLGELFVRGHSVMKGYLNNPQGTEKAF 415
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
G ++TGD+G+ + DGY+EIKDRSKD+IISGGENIS+ E+ESVLY+HP V EAAVV P
Sbjct: 416 AGGWFHTGDLGVWYEDGYVEIKDRSKDIIISGGENISTLEVESVLYAHPAVLEAAVVAGP 475
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
DP W EIPCAF++LK G +E+DI+ +CR + + PK V F+DELPKT+TGK
Sbjct: 476 DPHWGEIPCAFIALK-----AGQAASEEDIVSHCREGLAGFKCPKKVFFVDELPKTSTGK 530
Query: 539 VQKYVLGDIAN 549
QK+VL + N
Sbjct: 531 FQKHVLREQLN 541
>gi|240140988|ref|YP_002965468.1| AMP-dependent synthetase/acyl-CoA ligase [Methylobacterium
extorquens AM1]
gi|418059193|ref|ZP_12697148.1| o-succinylbenzoate--CoA ligase [Methylobacterium extorquens DSM
13060]
gi|240010965|gb|ACS42191.1| putative AMP-dependent synthetase/acyl-CoA ligase [Methylobacterium
extorquens AM1]
gi|373567234|gb|EHP93208.1| o-succinylbenzoate--CoA ligase [Methylobacterium extorquens DSM
13060]
Length = 545
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 247/549 (44%), Positives = 346/549 (63%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PNPAN PLTPL +++RAA D ++I+ +++ Y RC +LA++L++ GI
Sbjct: 11 LDPNPANFQPLTPLTYLDRAARTFPDRVAVIHGPLRRSYADLYARCRRLAAALAARGIGR 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ N PAM E H+ VPM+GA+ NT+NTRLDA ++ L H E+K+ VD +
Sbjct: 71 GDTVAVLLANTPAMIECHYGVPMTGAVLNTLNTRLDAGALAFCLDHGEAKVFIVDREFAR 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ E + + LV+ DD E + S+P + D YE+ LA GDP F W
Sbjct: 131 IGREALD----KAGVSPLVIDYDDPEFTGDSAP---VGETD----YEDFLAAGDPDFGWA 179
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++++ ++I +P+ +V LWTLPMFH N
Sbjct: 180 MPGDEWDAISLNYTSGTTGDPKGVVYHHRGAALLSLGNVITAGLPQHAVYLWTLPMFHCN 239
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W ++V T+VCLR+ AP ++A + +HGVTH+ GAPIV++ L ++PEA++ L
Sbjct: 240 GWCFPWTLSIVAGTHVCLRQVRAPAMYAALAEHGVTHLSGAPIVMSTLLNAPEAQKRPLP 299
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R V LTA +PPP VL GF V+H YG TE G V AW W+ L E+A
Sbjct: 300 RRVHFLTAAAPPPEAVLAAMGEAGFDVTHLYGLTETYGPAVVNAWHEDWDALSRDEQARK 359
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L +D+ DPET S+ DG + GE++ RG +M GYLK+P +T K G
Sbjct: 360 KARQGVRYPVLEGLDVRDPETMESLPADGTSLGEVMFRGNVVMRGYLKNPASTEAAFKGG 419
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GD+G+ HPDGY+++KDRSKD+IISGGENISS E+E L+ HP V AAVV +PD
Sbjct: 420 WFRSGDLGVKHPDGYIQLKDRSKDIIISGGENISSIEVEDALFKHPAVAAAAVVAKPDAK 479
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF+ LK G ++ T ++++ +CR R+ Y +P+ VVF ELPKT+TGKVQK
Sbjct: 480 WGETPCAFIELKEGREA-----TSEELVAWCRERLAPYKLPRHVVF-GELPKTSTGKVQK 533
Query: 542 YVLGDIANS 550
+VL + A
Sbjct: 534 FVLREKARE 542
>gi|407781501|ref|ZP_11128719.1| acyl-CoA synthetase [Oceanibaculum indicum P24]
gi|407207718|gb|EKE77649.1| acyl-CoA synthetase [Oceanibaculum indicum P24]
Length = 547
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/547 (43%), Positives = 343/547 (62%), Gaps = 22/547 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN L+PL F+ER+A D ++I+ ++Y++ RC +LA++L++ GI G VS
Sbjct: 19 ANHVALSPLSFLERSALVYPDKIAVIHGKSSYSYRDLRARCGRLAAALAARGIGAGDTVS 78
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
++APNIP + E H+ +PM GA+ N INTRLDA TI+ IL+H ESK + D + ++
Sbjct: 79 ILAPNIPPLLEAHYGIPMLGAVLNAINTRLDADTIAFILQHGESKALIADREFAGVV--- 135
Query: 129 VSLFPPHSKTPKLVLIT--DDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK 186
P K + +L+ DD E + S I YE+ LA+G P
Sbjct: 136 ---GPALKKLGRDILLVEIDDPEAGGAGSSLGGI-------DYEDFLAEGSSGHVCAPPA 185
Query: 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
+ P+ LNYT GTT PKGVV ++ ++ A+ ++ + + Q+ LWTLPMFH NGW+
Sbjct: 186 DEWHPIALNYTSGTTGNPKGVVYSHRGAYLNAIGQVLAFGLGPQTRYLWTLPMFHCNGWT 245
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL--DRPV 304
+TW VG T+VCLR+ D +F IR H V+HMCGAPIVLN++ +P+ ++L D V
Sbjct: 246 YTWAVTAVGGTHVCLRRVDPALIFPAIRDHAVSHMCGAPIVLNMMIHAPDDQKLAFDHVV 305
Query: 305 RILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
+ T G+ PP+ V+ + E++GF V+H YG TE G + CAW+ W L +R+ AR
Sbjct: 306 EVATGGAAPPSAVIEKMEAMGFCVTHLYGLTETYGPSTVCAWQEDWADLELEKRSGKMAR 365
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYY 424
QGV L + +VDPET V DGQT GE++ RG ++M+GYLK+ +AT + G Y+
Sbjct: 366 QGVHYPTLQGMRVVDPETQQDVPADGQTIGEVLFRGNTVMMGYLKNRKATDEAFAGGWYH 425
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
+GD+ ++HPDGY+E+KDR+KD+IISGGENISS E+E L+ HP + EAAVV RPD W E
Sbjct: 426 SGDLAVLHPDGYMEVKDRAKDIIISGGENISSLEVEEALFRHPSIMEAAVVARPDEKWGE 485
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
PCAFV+LK G + +E+ +I +CR ++ R+ VP+TVVF LPKT+TGK+QK+VL
Sbjct: 486 SPCAFVTLKPGAPT----LSEEQVIDWCRQKLARFKVPRTVVF-GPLPKTSTGKIQKFVL 540
Query: 545 GDIANSM 551
A +
Sbjct: 541 RQQAEGL 547
>gi|399156271|ref|ZP_10756338.1| acyl-CoA synthetase [SAR324 cluster bacterium SCGC AAA001-C10]
Length = 538
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/545 (42%), Positives = 330/545 (60%), Gaps = 18/545 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L+ NPAN PLTPL F+ R A + +IIY + Y+W Q RCL +ASSL+ GI
Sbjct: 6 ESLRKNPANHVPLTPLSFLHRTADIYGEREAIIYGERQYSWRQLRERCLCMASSLTKLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
G V+V+A N P ++E HF+VPM+ A+ NTINTRLDA T++ ILK + K + VD
Sbjct: 66 GLGDTVAVMAFNTPELFEAHFSVPMTSAVLNTINTRLDAETVAYILKFGQVKALIVDR-- 123
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
LL K++LI DD S + + +++ GDPQF+
Sbjct: 124 -ELLPLAQKALQDEQIKLKIILIDDDSAEVKPSVELEVLEYEELINS-------GDPQFT 175
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
+ + + LNYT GTT PKGVV ++ +++++ ++ W +P L+ +PMFH
Sbjct: 176 CPPLQDEWQALSLNYTSGTTGRPKGVVYHHRGSYLMSMGTVTAWELPHHPRYLYCVPMFH 235
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQ 299
NGW W +V AT VC+R F +F L+ +H +TH GAP+VLN+L+++P E K
Sbjct: 236 CNGWGHAWAMTLVAATVVCMRSFSPKLLFDLLERHDITHFGGAPVVLNMLANAPAEEQKH 295
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
DR ++++TAG+PPPA VL GF V H YG TE G + A + W A R+
Sbjct: 296 FDRSIKVMTAGAPPPAKVLESMTEFGFDVLHVYGLTETYGHILESAPQSDWQDQSAARRS 355
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L +RQGVR + +V ++DP+T V DG+T GEIVMRG + M GYL + EAT++
Sbjct: 356 ELISRQGVRFPMMEDVSVIDPKTKKVVPSDGKTIGEIVMRGNTTMKGYLNNKEATAEAFD 415
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+ ++ DGY++IKDR+KD+IISGGENISS EIE+VLY HP V EAAVV PD
Sbjct: 416 GGWFHSGDLAVVQEDGYIQIKDRAKDIIISGGENISSVEIENVLYKHPAVGEAAVVAMPD 475
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+PCAF+ LK G T +++II++C + R+ PK ++F LPKTATGK+
Sbjct: 476 DKWGEVPCAFIELKAGKS-----TKDQEIIEFCTQHMARFKRPKKIIF-GPLPKTATGKI 529
Query: 540 QKYVL 544
QK+ L
Sbjct: 530 QKHEL 534
>gi|307944502|ref|ZP_07659842.1| AMP-dependent synthetase and ligase [Roseibium sp. TrichSKD4]
gi|307772251|gb|EFO31472.1| AMP-dependent synthetase and ligase [Roseibium sp. TrichSKD4]
Length = 549
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/550 (42%), Positives = 333/550 (60%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN L+PL F+ RAA + +II+ + + Y+R QLAS+L+ GI
Sbjct: 17 LGKNDANYAALSPLSFLVRAADVFPEQTAIIHGSSRQNYKTFYQRSRQLASALAGLGIGK 76
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VSV+ PN+P M E H+ VPM+ A+ +++NTRLDA I+ L H+ +K++ D S+
Sbjct: 77 GDTVSVMLPNVPPMLEAHYGVPMTKAVLHSMNTRLDAGIIAFQLDHANTKVLITDREFST 136
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ E ++L +K +++ D P YE L GDP ++W
Sbjct: 137 TMKEALAL----AKVNPVIIDYSDPVFPQDGEPLG-------THDYETFLKSGDPDYAWS 185
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ +++A ++I + K V LWTLPMFH N
Sbjct: 186 LPDDEWDAISLNYTSGTTGNPKGVVYHHRGAYLLAQANIITASMAKHPVYLWTLPMFHCN 245
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLD 301
GW F W +VV T+VCLR ++ L+ VTH+CGAPI+++ L ++P + + L+
Sbjct: 246 GWCFPWSLSVVAGTHVCLRWVRPKALWDLLADENVTHLCGAPIIMSTLLNAPKEDVRNLN 305
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V TA +PPP VL + GF V+H YG TE+ G V WK +W+ L A E+AS
Sbjct: 306 DVVEFFTAAAPPPESVLAAMKEAGFNVTHLYGLTEVYGPAVVNDWKREWDGLTASEQASK 365
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR + L +D++DPET V DG + GE++ RG +M GYLK+ +AT++ G
Sbjct: 366 KARQGVRYVALEGLDVLDPETMQPVPADGTSLGEVMFRGNVVMKGYLKNEDATNEAFAGG 425
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G+ HPDGY+++KDRSKD+IISGGENISS E+E VLY HP + AAVV RPD
Sbjct: 426 WFHSGDLGVKHPDGYIQLKDRSKDIIISGGENISSIEVEDVLYKHPDIQGAAVVARPDDK 485
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV + G+ +E DII YCR + + P+TVVF ELPKT+TGK+QK
Sbjct: 486 WGETPCAFVEIAPGSS-----VSETDIIAYCRENLAHFKAPRTVVFC-ELPKTSTGKIQK 539
Query: 542 YVLGDIANSM 551
+ L + A ++
Sbjct: 540 FELRERAKAL 549
>gi|356519934|ref|XP_003528623.1| PREDICTED: LOW QUALITY PROTEIN: medium-chain-fatty-acid--CoA
ligase-like [Glycine max]
Length = 560
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/552 (43%), Positives = 341/552 (61%), Gaps = 23/552 (4%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYR---RCLQLASSLSSFGINPGHV 66
N LTPL F+ERAA S+++ YTW QTY+ L+ ++L++ +
Sbjct: 14 NYTALTPLWFLERAAQVHPTRDSLLHGSRHYTWHQTYQLLPETLKCTTNLTT--DSDTKR 71
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V+VIAPN+PA+YE HF +PM+GA+ N +N RL+A TI+ +L H + V VD L
Sbjct: 72 VAVIAPNVPALYEAHFGIPMAGAVLNAVNIRLNASTIAFMLGHCSAAAVMVDQEFFYLAE 131
Query: 127 EVVSLFPPHSKT---PKLVLITDDKEISSSSSPPPRI-PPADFVDTYENMLAKGDPQFSW 182
E + ++ +KT P L++I D+ + P I + YE+ L GDP+++W
Sbjct: 132 EALKIWSEKAKTFSPPLLIVIGDE-----NCDPKALIYAVSKGAIEYEDFLQSGDPEYAW 186
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P+ + + L YT GTT++PKGVV ++ +++++ + W + +V LWT+PMFH
Sbjct: 187 KPPEDEXQSIALGYTSGTTASPKGVVLHHRGAYLMSLSGALIWGMTDGAVYLWTVPMFHC 246
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAKQLD 301
NGW +TW A TN+CLRK A V+ I K+ VTH C AP+VLN +L++ PE L
Sbjct: 247 NGWCYTWALAARCGTNICLRKVTAKAVYEAIAKYKVTHFCAAPVVLNTILNAPPEDTILP 306
Query: 302 RP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
P VR+ T G+PPP VL GF V+H YG +E+ G V C+WKP+W LP +A
Sbjct: 307 LPHVVRVSTGGAPPPPSVLSGMSERGFGVTHVYGLSEVYGPAVYCSWKPEWESLPPETQA 366
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L ARQGVR IGL +D+V+ +T V DG+T GE+VMRG ++M GYLK+P+A +
Sbjct: 367 RLHARQGVRYIGLEYLDVVNAKTMQPVPADGKTVGEVVMRGNAVMKGYLKNPKANEEAFA 426
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
+G +++GD+ + H DGY+EIK RSKD+IISG ENISS EIE+ LYSHP A++ R D
Sbjct: 427 NGWFHSGDLAVKHQDGYIEIKARSKDIIISGAENISSVEIENTLYSHP-----AILXRAD 481
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E PCAFV+LK G D +D++++ RA++P Y VPK+VVF LPKTATGK+
Sbjct: 482 KKWGESPCAFVTLKPGVDKSNEQRMIEDVLKFSRAKMPAYWVPKSVVF-GALPKTATGKI 540
Query: 540 QKYVLGDIANSM 551
QK++L A M
Sbjct: 541 QKHLLRAKAKEM 552
>gi|410693566|ref|YP_003624187.1| putative AMP-dependent synthetase/ligase [Thiomonas sp. 3As]
gi|294339990|emb|CAZ88353.1| putative AMP-dependent synthetase/ligase [Thiomonas sp. 3As]
Length = 547
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/551 (44%), Positives = 331/551 (60%), Gaps = 19/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PN AN PLTPL F++ AA ++++ W+QT RC +LAS+L G+
Sbjct: 6 LTPNCANHAPLTPLIFLDHAADLYPQRLAVLHGSLQRNWAQTRERCRRLASALVRRGLQR 65
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+V+ PN+P M E F VPM+G + NT+NTRLDA ++ +L H +K V VD ++
Sbjct: 66 GDVVAVMLPNVPTMVEAQFGVPMAGLVLNTLNTRLDAEALAYMLLHGGAKAVLVDPELAA 125
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD--TYENMLAKGDPQFS 181
++ + V+L P LV+ D E +P + YE +LA+G +
Sbjct: 126 VMQQAVALAVEQGLAPPLVIDVPDPEF---------VPGGQGIGALNYEALLAEGLASEA 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
+ D + LNYT GTT PKGVV ++ ++ AV ++++W +PK V LWTLPMFH
Sbjct: 177 LPDVADEWDSISLNYTSGTTGKPKGVVYSHRGAYVNAVSNILEWDMPKHPVYLWTLPMFH 236
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A NVCLRK +A +F IR GVTH CGAPIV NLL ++P +
Sbjct: 237 CNGWCFPWTVAARAGVNVCLRKVEAQAIFDRIRSAGVTHYCGAPIVQNLLVNAPAEMKAG 296
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+ VR + AG+ PPA ++ E++GF ++H YG TE+ G CA + W +LP ERA
Sbjct: 297 IHHAVRAMVAGAAPPAALIEGLEAMGFDLTHTYGLTEVYGPATVCAKQESWTELPLPERA 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L ARQGVR + + +T V DGQT GEI+ RG +M GYL +PEAT +
Sbjct: 357 RLNARQGVRYHLQNAATVRNSDTLEEVPHDGQTLGEIMFRGNIMMKGYLGNPEATEQAFH 416
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+ ++ PDGY++IKDRSKDVIISGGENISS E+E VLY HP V AAVV PD
Sbjct: 417 GGWFHSGDLAVVDPDGYIKIKDRSKDVIISGGENISSIEVEDVLYRHPAVLVAAVVAMPD 476
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
P W E PCAFV LK G TE++II +C+A + + P+ VVF E+PKT+TGK+
Sbjct: 477 PKWGESPCAFVELKQGR-----AVTEEEIIAFCKAHLAGFKTPRKVVF-GEVPKTSTGKI 530
Query: 540 QKYVLGDIANS 550
QKY L A+S
Sbjct: 531 QKYALRAQAHS 541
>gi|134293534|ref|YP_001117270.1| acyl-CoA synthetase [Burkholderia vietnamiensis G4]
gi|387905119|ref|YP_006335457.1| AMP-dependent synthetase and ligase [Burkholderia sp. KJ006]
gi|134136691|gb|ABO57805.1| AMP-dependent synthetase and ligase [Burkholderia vietnamiensis G4]
gi|387580011|gb|AFJ88726.1| AMP-dependent synthetase and ligase [Burkholderia sp. KJ006]
Length = 550
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 247/553 (44%), Positives = 335/553 (60%), Gaps = 28/553 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ F+ RAA +I++ D TW++TY R QLAS+L+ G+
Sbjct: 9 LGRREANYVPLTPIDFLVRAAEVYGARLAIVHGDVRRTWAETYTRAKQLASALARAGVGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----H 119
G V+ + PNIPAM E HF VPM+GA+ NTINTRLD ++ +L+H E+K++ VD
Sbjct: 69 GETVAALLPNIPAMVEAHFGVPMAGAVLNTINTRLDIASMLFMLRHGEAKVLIVDTEYAE 128
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
L+ LEV L K+V + D + + P R A YE +A GDP
Sbjct: 129 LAHRAALEVPGL--------KIVSVAD-----AMPADPARFAGAT---DYEAFVASGDPD 172
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
++W P + + + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPM
Sbjct: 173 YTWTPPADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHAVYLWTLPM 232
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A NVCLR+FDA TVF LIR +TH CGAPIV + ++++P +
Sbjct: 233 FHCNGWCFPWAIAARAGVNVCLRRFDAKTVFDLIRNERITHYCGAPIVQSAIANAPAELR 292
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
+D V + AG+ P V+ + + +GF + H YG TE+ G CA + W+ LP E
Sbjct: 293 AGIDHKVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAKQAHWDDLPDDE 352
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
RA L ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+P AT +
Sbjct: 353 RARLNARQGVRYHLEAGATVLDPDTMEPVPADGETLGEIMFRGNICMKGYLKNPHATDEA 412
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
+ G ++TGD+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV
Sbjct: 413 FQGGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVEVAAVVAM 472
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PDP W E+PCAFV L+ GM TE +I +CR + + VPK V F ELPKT+TG
Sbjct: 473 PDPKWGEVPCAFVELRN-----GMSATEDEIFAHCRQLLAGFKVPKVVRF-GELPKTSTG 526
Query: 538 KVQKYVLGDIANS 550
K+QK+ L + S
Sbjct: 527 KIQKFQLRNAVGS 539
>gi|170703156|ref|ZP_02893968.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria
IOP40-10]
gi|170131933|gb|EDT00449.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria
IOP40-10]
Length = 550
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/544 (44%), Positives = 333/544 (61%), Gaps = 20/544 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTP+ F+ RAA + +I++ D TW +T+ R QLAS+L+ G+ G V+
Sbjct: 14 ANYVPLTPIDFLVRAAEVYGERLAIVHGDVRRTWGETHTRAKQLASALAQAGVARGDTVA 73
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PNIPAM E HF VPM+GA+ NTINTRLD ++ +L+H E+K++ VD + L
Sbjct: 74 AVLPNIPAMVEAHFGVPMAGAVLNTINTRLDISSVLFMLRHGEAKVLIVDTEYADLAHRA 133
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
P K+V + D + + P R A YE +A GDP ++W P +
Sbjct: 134 AREVP----GLKIVSVAD-----AMPADPARFAGAT---DYEAFVAGGDPDYAWTPPADE 181
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPMFH NGW F
Sbjct: 182 WDAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHAVYLWTLPMFHCNGWCFP 241
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDRPVRI 306
W A NVCLRKFDA TVF LIR +TH CGAPIV + ++++P + +D V
Sbjct: 242 WAVAARAGVNVCLRKFDAKTVFDLIRSERITHYCGAPIVQSAIANAPAEFRAGIDHTVHA 301
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
+ AG+ P V+ + + +GF + H YG TE+ G CA + W+ LP ERA L ARQG
Sbjct: 302 MVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAKQAHWDALPDDERARLNARQG 361
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
VR ++DP+T V DG+T GEI+ RG M GYLK+P+AT + G ++TG
Sbjct: 362 VRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKGYLKNPKATDEAFHGGWFHTG 421
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV PDP W E+P
Sbjct: 422 DLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVAMPDPKWGEVP 481
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546
CAFV L+ G + TE++II +C+ + + VPK V F ELPKT+TGK+QK+ L +
Sbjct: 482 CAFVELRDGASA-----TEEEIIAHCKQLLAGFKVPKAVRF-GELPKTSTGKIQKFQLRN 535
Query: 547 IANS 550
S
Sbjct: 536 AVGS 539
>gi|254253962|ref|ZP_04947279.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligase II [Burkholderia
dolosa AUO158]
gi|124898607|gb|EAY70450.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligase II [Burkholderia
dolosa AUO158]
Length = 550
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/546 (44%), Positives = 332/546 (60%), Gaps = 20/546 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTP+ F+ R+A + +I++ D TW+ TY R +LAS+L+ G+ G V+
Sbjct: 14 ANYVPLTPIDFLVRSAEVYGERVAIVHGDVRRTWADTYARAKRLASALAQAGVARGDTVA 73
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PNIPAM E HF VPM+GA+ NTINTRLD ++ +L+H E+K++ VD + L V
Sbjct: 74 AVLPNIPAMIEAHFGVPMAGAVLNTINTRLDIASVLFMLRHGEAKVLIVDTEYAELAQRV 133
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
P K +S + + P + YE +A GDP ++W P +
Sbjct: 134 ALELPAL------------KIVSVADAMPADLARFARATDYEAFVAGGDPDYAWTPPADE 181
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + LNYT GTT PKGVV ++ ++ A+ +L++W +PK +V LWTLPMFH NGW F
Sbjct: 182 WDAIALNYTSGTTGDPKGVVYHHRGAYLAAISNLLEWDMPKHAVYLWTLPMFHCNGWCFP 241
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDRPVRI 306
W A NVCLRKFDA TVF LIR+ VTH CGAPIV + ++++P + +D V
Sbjct: 242 WAVAARAGVNVCLRKFDAKTVFDLIRRERVTHYCGAPIVQSAIANAPAEFRAGIDHTVHA 301
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
+ AG+ P V+ + + +GF + H YG TE+ G CA + W+ L ERA L ARQG
Sbjct: 302 MVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAKQSHWDALSDDERARLNARQG 361
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
VR ++DP+T V DG+T GEI+ RG M GYLK+P+AT + + G ++TG
Sbjct: 362 VRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKGYLKNPKATDEAFQGGWFHTG 421
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV PDP W E+P
Sbjct: 422 DLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVAMPDPKWGEVP 481
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546
CAFV L+ G + TE +I+ +CR + + VPK V F ELPKT+TGK+QK+ L +
Sbjct: 482 CAFVELREGASA-----TEDEIVAHCRQLLAGFKVPKAVRF-GELPKTSTGKIQKFQLRN 535
Query: 547 IANSMS 552
S +
Sbjct: 536 AVGSTA 541
>gi|403049992|ref|ZP_10904476.1| acyl-CoA synthetase [Acinetobacter bereziniae LMG 1003]
Length = 548
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/554 (43%), Positives = 345/554 (62%), Gaps = 17/554 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L PAN L+PL ++ERAA D +I++ +W +TY+RC Q A L + GI
Sbjct: 6 DELPRTPANFVALSPLRYLERAAYIYPDQDAIVHGHRHISWRETYQRCRQFAHQLRNLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PNIPAM E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 EKNDTVSVLLPNIPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
++L E V + + + + DK S+S RI + YE L GD F
Sbjct: 126 ATLAQEAVGMLSQNIYIIDVADVEYDKNDSTS-----RIGQIE----YEQWLQGGDTDFE 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P+ + D + LNYT GTT PKGVV ++ +I A ++I + + LWTLP+FH
Sbjct: 177 WHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYINAASNIIACGMTPRCKYLWTLPLFH 236
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD 301
NGW F W A G TN+CLRK D V+ LI ++ V + CGAPIVL++L ++PE KQ+
Sbjct: 237 CNGWCFAWTIAANGGTNICLRKIDPELVYQLIDQYKVDYFCGAPIVLSMLINTPEDKQIK 296
Query: 302 --RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
V ++ AG+ PPA ++ +G V+H YG TE G + CA + W+ L +E+A
Sbjct: 297 FKHHVEVMVAGAAPPAAIIEGMHHIGVQVNHVYGLTETYGPSALCASQAGWSDLSIQEQA 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L +RQGV + ++D ET V DG+T GEI+ RG +M GYLK+ +AT + K
Sbjct: 357 QLHSRQGVPYPLQDGMRVLDAETMQPVPNDGKTMGEIMFRGNIVMKGYLKNTQATEEAFK 416
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+ + PDGY +I DRSKD+IISGGENISS E+E +LY+HP + AAVV +PD
Sbjct: 417 GGWFHTGDLAVCQPDGYAKIMDRSKDIIISGGENISSLEVEEILYTHPAIMTAAVVAQPD 476
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
P WQE+PCAF+ LK + TT +++I++C+ + R+ VPK+VV I E+PKT+TGK+
Sbjct: 477 PRWQEVPCAFIELKQDAE-----TTPEEVIEFCKQHLARFKVPKSVV-ICEIPKTSTGKL 530
Query: 540 QKYVLGDIANSMSM 553
QK++L D A ++
Sbjct: 531 QKFILRDWAKERAV 544
>gi|254503284|ref|ZP_05115435.1| AMP-binding enzyme, putative [Labrenzia alexandrii DFL-11]
gi|222439355|gb|EEE46034.1| AMP-binding enzyme, putative [Labrenzia alexandrii DFL-11]
Length = 544
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/555 (43%), Positives = 345/555 (62%), Gaps = 24/555 (4%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L P AN PL+PL F+ER A D +++YN+ YTWS R ++ASSL GI
Sbjct: 6 EALPPQTANHVPLSPLSFLERTAALFPDRLAVVYNERHYTWSNVLERVRRIASSLKQRGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
PG VSV+A N P ++ELH+AVP++GA+ NTINTRL+ T++ IL+HS++KLV D
Sbjct: 66 GPGDTVSVMAANTPELFELHYAVPLTGAVLNTINTRLEPETVAYILEHSDAKLVIADTAF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFV--DTYENMLAKGDPQ 179
S ++ + F + K ++ I D P P + + + +E +++ GDP
Sbjct: 126 SGVISQA---FDINGKPLPVINIAD-----------PDGPGGNLIGDEVFEGLVSSGDPD 171
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P + + LNYT GT+ PKGVV ++ +++A+ + I W +P+ V L+++PM
Sbjct: 172 FPWQGPADEWQALALNYTSGTSGRPKGVVYHHRGAYLMAMGTPIAWELPRHPVYLYSVPM 231
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW W ++ T +C+R+ VF LI KH VTH+ GAPIVL++L ++PEA +
Sbjct: 232 FHCNGWCHAWTMTLMAGTIICIRQVTGAAVFDLIAKHQVTHLGGAPIVLSMLVNTPEADR 291
Query: 300 LDRP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
P V+I+TAG+PPPA VL T++LGF V YG TE G C W+ +W+ L A E
Sbjct: 292 TSSPGKVKIMTAGAPPPAAVLAATKALGFEVMQVYGLTETYGHVAQCLWREEWDDLSADE 351
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L++ QGV VD++D E+G V DG+T+GEIV+RG ++M GY K+ EAT +
Sbjct: 352 QAELQSWQGVGFPMTESVDVIDRESGEPVPWDGETQGEIVIRGNTVMKGYYKNREATDEA 411
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G + +GD + H +GY++I+DR KDVIISGGENISS E+E VL+ HP V AAVV
Sbjct: 412 FSGGHFQSGDAAVRHENGYVQIRDRLKDVIISGGENISSVEVEGVLHRHPDVVLAAVVAL 471
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD W E+PCAFV LK G+ TE +I +CR + + PK +VF ELPKTATG
Sbjct: 472 PDEKWGEVPCAFVELKEGSQE-----TEDSLIAFCRQNMAGFKRPKKIVFT-ELPKTATG 525
Query: 538 KVQKYVLGDIANSMS 552
K+QK+VL A ++S
Sbjct: 526 KIQKFVLRQEARTLS 540
>gi|254475129|ref|ZP_05088515.1| AMP-dependent synthetase and ligase [Ruegeria sp. R11]
gi|214029372|gb|EEB70207.1| AMP-dependent synthetase and ligase [Ruegeria sp. R11]
Length = 542
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/551 (42%), Positives = 331/551 (60%), Gaps = 21/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN PLTPL + RAA D P+++Y T++ Y RC +LAS+L+ G+ P
Sbjct: 10 LEKTAANYVPLTPLSHLRRAAHVFADVPAVVYGSHRKTYAAYYDRCTRLASALAGMGVRP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+ + PN+PA E HF VP G + NTINTRLD T++ I H E+K+V VD S
Sbjct: 70 GDVVATLIPNLPAQAEAHFGVPACGGVLNTINTRLDVGTVAYIFDHGEAKIVLVD--SQF 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L L + K P ++ + D++ +S P YE++L+ F W+
Sbjct: 128 LSLAEQAKQDCEGKGPLIIEVPDEQAGYPASGRHP---------VYEDVLSAASHDFDWI 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + + LNYT GTT PKGVV ++ +++ + ++I W + Q L +P+FH N
Sbjct: 179 MPQDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVISWRMVMQPKYLAIVPLFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW+ TW V+G T VC R AP ++ I GVTH GAPIVLN++ ++P+ ++ D
Sbjct: 239 GWNHTWMMPVLGGTLVCCRDITAPAIYDAIADEGVTHFGGAPIVLNMIVNAPQDQRRSFD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKP-KWNKLPARERAS 360
V + TAG+PP L + E+LGF V+ YG TE G C WK W+ L + RA+
Sbjct: 299 HTVEVFTAGAPPAPATLEKIEALGFHVTQVYGLTETYGHVTECLWKGGSWDNLDQQGRAT 358
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
+KARQGV + + ++D ET + +GQ +GEIVMRG S+M GYLK+P+AT + K
Sbjct: 359 IKARQGVAFPMMDHITVMD-ETMSQIPMNGQDQGEIVMRGNSVMKGYLKNPDATQEAFKG 417
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +++GD+ + HPDGY++I DR+KD+IISGGENISS E+E VL +HP VN AAVV +PD
Sbjct: 418 GYFHSGDIAVQHPDGYIQIADRAKDIIISGGENISSVEVEGVLMAHPAVNLAAVVAKPDD 477
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV LK G D E +I + R + + PK VVF ELPKT+TGK+Q
Sbjct: 478 KWGEVPCAFVELKPGED-----VDEAALIAFSRDTLAGFKAPKKVVF-QELPKTSTGKIQ 531
Query: 541 KYVLGDIANSM 551
K+ L IA +
Sbjct: 532 KFELRSIARKL 542
>gi|172063220|ref|YP_001810871.1| acyl-CoA synthetase [Burkholderia ambifaria MC40-6]
gi|171995737|gb|ACB66655.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MC40-6]
Length = 550
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/538 (44%), Positives = 331/538 (61%), Gaps = 20/538 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTP+ F+ RAA + +I++ D TW +T+ R QLAS+L+ G+ G V+
Sbjct: 14 ANYVPLTPIDFLVRAAEVYGERLAIVHGDVRRTWGETHTRAKQLASALAQAGVARGDTVA 73
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PNIPAM E HF VPM+GA+ NTINTRLD ++ +L+H E+K++ VD + L
Sbjct: 74 ALLPNIPAMVEAHFGVPMAGAVLNTINTRLDISSVLFMLRHGEAKVLIVDTEYADLAHRA 133
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
P K+V + D + + P R A YE +A GDP ++W P +
Sbjct: 134 AREVP----GLKIVSVAD-----AMPADPARFAGAT---DYEAFVAGGDPDYAWTPPADE 181
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + LNYT GTT PKGVV ++ ++ A+ ++++W +PK SV LWTLPMFH NGW F
Sbjct: 182 WDAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHSVYLWTLPMFHCNGWCFP 241
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDRPVRI 306
W A NVCLRKFDA TVF LIR +TH CGAPIV + ++++P + +D V
Sbjct: 242 WAVAARAGVNVCLRKFDAKTVFDLIRSERITHYCGAPIVQSAIANAPAEFRAGIDHTVHA 301
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
+ AG+ P V+ + + +GF + H YG TE+ G CA + W+ LP ERA L ARQG
Sbjct: 302 MVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAKQAHWDALPDDERARLNARQG 361
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
VR ++DP+T V DG+T GEI+ RG M GYLK+P+AT + G ++TG
Sbjct: 362 VRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKGYLKNPKATDEAFHGGWFHTG 421
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV PDP W E+P
Sbjct: 422 DLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVAMPDPKWGEVP 481
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
CAFV L+ G + TE++I+ +C+ + + VPK V F ELPKT+TGK+QK+ L
Sbjct: 482 CAFVELREGASA-----TEEEIVAHCKQLLAGFKVPKAVRF-GELPKTSTGKIQKFQL 533
>gi|407975350|ref|ZP_11156256.1| AMP-dependent synthetase and ligase [Nitratireductor indicus C115]
gi|407429435|gb|EKF42113.1| AMP-dependent synthetase and ligase [Nitratireductor indicus C115]
Length = 547
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/550 (42%), Positives = 338/550 (61%), Gaps = 14/550 (2%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN LTPL +ERAA + +II+ + + ++ + R ++LAS+LS+ GI
Sbjct: 10 LDKNPANYQALTPLVLLERAAKVFPERIAIIHGEASVNYATFWERSIKLASALSAHGIGK 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ N P M E H VPM+ + +++NTRLDA I+ L H+ESK+V VD SS
Sbjct: 70 GDTVTVMLSNTPPMLEAHHGVPMTKGVLHSLNTRLDAPIIAFQLDHAESKVVIVDREFSS 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ E + L + LV+ DD E + + P P+ +D YE ++ GD F+W
Sbjct: 130 VMKEALEL----ASVKPLVIDYDDPEYAQDA-PHPKGERIGSID-YEAFVSSGDAGFAWS 183
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++A + + + +V LWTLPMFH N
Sbjct: 184 LPDDEWDAIALNYTSGTTGNPKGVVYHHRGAALMAYANTVHAALGSGAVYLWTLPMFHCN 243
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W A+ G T+VCLR A ++ I HGVTH+CGAPIV++ L ++P+ ++
Sbjct: 244 GWCFPWTLALTGGTHVCLRWVRAKAMYDAIADHGVTHLCGAPIVMSTLLNAPDDQKRGFT 303
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+ V TA +PPP VL GF+V+H YG TE G V WK +W++L RAS
Sbjct: 304 QTVTFNTAAAPPPETVLSGMARAGFVVTHLYGLTETYGPAVVNEWKAEWDELDDAGRASR 363
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L ++ ++DPET + RDG+T GE++ RG +M GYLK+ AT + G
Sbjct: 364 KARQGVRYAALDDLTVMDPETMVETPRDGETIGEVMFRGNIVMKGYLKNKVATGEAFAGG 423
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G+MHPDGY+++KDRSKD+IISGGENISS E+E LY HP V VV + D
Sbjct: 424 WFHSGDLGVMHPDGYIQLKDRSKDIIISGGENISSIEVEDALYKHPAVAACGVVAKSDER 483
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P AFV LK G + TE++II +CR+ + + PK+V+F E+P+T+TGK+QK
Sbjct: 484 WGETPIAFVELKEGRQA-----TEEEIIAHCRSLLAHFKCPKSVIF-SEIPRTSTGKIQK 537
Query: 542 YVLGDIANSM 551
+ L D+ S+
Sbjct: 538 FRLRDLVKSL 547
>gi|374290731|ref|YP_005037766.1| putative AMP-dependent synthetase/ligase [Azospirillum lipoferum
4B]
gi|357422670|emb|CBS85509.1| putative AMP-dependent synthetase/ligase [Azospirillum lipoferum
4B]
Length = 550
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/543 (45%), Positives = 339/543 (62%), Gaps = 20/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN LTPL F+ERAA+ D ++++ TW++T+ R +LA++L++ GI
Sbjct: 19 LDRNAANFVALTPLTFLERAASVWPDRLAVVHGPVRRTWAETFVRVRRLAAALANLGIGK 78
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+++A N P ++E HF VP++GA+ N +NTRLDA I+ ILKH E+K++ VD S
Sbjct: 79 GDTVAMLAANTPELFEAHFGVPLAGAVLNAVNTRLDAEAIAFILKHGEAKILIVDREFSG 138
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ + ++L +P V+ DD + R YE ++ + W
Sbjct: 139 VAKKALALL----DSPIPVVDIDDPTYTGGELIGDR--------DYEAFISDVGAEHPWT 186
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ ++ AV + + W + V LWTLPMFH N
Sbjct: 187 LPADEWQAIALNYTSGTTGNPKGVVYHHRGAYLNAVSNALSWNMGDAPVYLWTLPMFHCN 246
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP-EAKQ-LD 301
GW F W AV T VCLR+ V LIR+ VT+ CGAPIVLN+L+++P E KQ ++
Sbjct: 247 GWCFPWTIAVTAGTAVCLRQVRPDAVLKLIREERVTNFCGAPIVLNMLNNAPAELKQGIE 306
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+ V+++ AG+ PPA V+ E +G+ V+H YG TE G V C W +W+ L E+A++
Sbjct: 307 QTVKVMVAGAAPPAAVIAGMERMGWEVTHVYGLTECYGPTVVCVWHDRWDGLSLDEKAAI 366
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L V + DP T V +DG+T GEI+MRG ++M GYLK+P+AT + G
Sbjct: 367 KARQGVRGPMLEAVIVADPFTLEPVPKDGRTMGEIMMRGNNVMKGYLKNPKATDEAFAGG 426
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + H DGY+EIKDRSKD+IISGGENISS E+E VLY HP V EAAVV R D
Sbjct: 427 WFHTGDLAVWHEDGYVEIKDRSKDIIISGGENISSIEVEDVLYKHPEVLEAAVVARHDEK 486
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+LK G + TE DII +CR+ + + P+TVVF LPKT+TGK+QK
Sbjct: 487 WGETPCAFVTLKDGATA-----TEADIIAFCRSHMAHFKCPRTVVF-GPLPKTSTGKIQK 540
Query: 542 YVL 544
YVL
Sbjct: 541 YVL 543
>gi|149201273|ref|ZP_01878248.1| acyl-CoA synthase [Roseovarius sp. TM1035]
gi|149145606|gb|EDM33632.1| acyl-CoA synthase [Roseovarius sp. TM1035]
Length = 548
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/551 (43%), Positives = 334/551 (60%), Gaps = 19/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PLTPL F+ERAAT D +I++ +++ Y R QLAS+LS G+
Sbjct: 10 LDRNPANHQPLTPLSFLERAATVFPDHTAIVHGPLRRSYAAFYNRSRQLASALSVHGLGR 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VSV+ N PAM E H+ VPM GA+ ++INTRLDA I+ L H+ +++V VD
Sbjct: 70 GDTVSVMLANTPAMLECHYGVPMCGAVLHSINTRLDAGIIAFQLDHAMARVVIVDREFMP 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L+ E ++L K L++ DD E S P I A YE L+ GDP F W+
Sbjct: 130 LMQEALALV----KVTPLLIQYDDPEFSG-----PEI--AATAQDYEAFLSAGDPSFDWL 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + D + +NYT GTT PKGVV ++ +++A + + + K +V LWTLPMFH N
Sbjct: 179 MPEDEWDAISINYTSGTTGDPKGVVSHHRGAYLLAQGNALTTSMAKHAVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW F W + + T++CLR+ A ++ + + VTH+CGAPIV++L+ S+PE + LD
Sbjct: 239 GWCFPWTLSAIIGTHICLRQVRAEPIWEALAQERVTHLCGAPIVMSLMISAPETVKRPLD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ TA +PPP +L + GF V+H YG TE G V W W+ LPA E+A L
Sbjct: 299 HTVQFFTAAAPPPEKLLADMKDAGFDVTHLYGLTETYGPAVVNDWHDSWSTLPASEQARL 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR + L +D++DPET V RDG T GE++ RG +M GY ++P+AT + G
Sbjct: 359 KSRQGVRYLALEGLDVLDPETMNPVPRDGTTMGEVMFRGNVVMKGYFRNPKATQEAFAGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G+ HPDGY+++KDRSKDVIISGGENISS E+E LY HP V AVV P
Sbjct: 419 WFHSGDLGVRHPDGYIQLKDRSKDVIISGGENISSIEVEEALYRHPAVAVTAVVAMPHEK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV L + G + + +CR + Y VP VF E+P+T+TGK+QK
Sbjct: 479 WGETPCAFVEL-----ADGQAADAETLRAWCRDHLAPYKVPGRFVFT-EIPRTSTGKIQK 532
Query: 542 YVLGDIANSMS 552
++L A M+
Sbjct: 533 FLLRTRAKEMT 543
>gi|118161408|gb|ABK64089.1| putative AMP-dependent synthetase and ligase [Janthinobacterium
lividum]
Length = 544
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/543 (42%), Positives = 329/543 (60%), Gaps = 21/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN LTPL +I RAA + +I + TW +TY R +LASSL G+
Sbjct: 9 LGKNSANYAALTPLDYIARAAAVYGNRLAIAHGAVRQTWQETYARTRRLASSLIKLGVGT 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PN PAM E F VPM+GA+ N +N RLD +++ +L+H ++K++ D +
Sbjct: 69 GDTVAVMLPNTPAMVEASFGVPMAGAVLNALNIRLDLASLTFMLRHGQAKVLLADTEFAE 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L ++ + + P L +I + + P + P +D YE +LA GDP + W
Sbjct: 129 LARQMAA------QIPGLRVIQVNDVLG------PEVEPFAELD-YETLLASGDPGYDWQ 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ + A+ ++++W +PK +V LWTLPMFH N
Sbjct: 176 PPADEWDAIALNYTSGTTGDPKGVVYHHRGAALNALSNILEWDMPKHAVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W A NVCLRKF+ VF L+R+ +TH C APIV L+++P + +D
Sbjct: 236 GWCFPWTVAARAGVNVCLRKFEPKLVFDLMRELRITHYCAAPIVHAALANAPANWRDGID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
VR + AG+PPPA ++ + E++GF + H YG TE+ G CA + +W L ERA L
Sbjct: 296 WTVRGMVAGAPPPAAMVAKIEAMGFDLIHSYGLTEVYGPAAICAEQDEWAALSQEERAVL 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR + V ++DPET V DG+ GEI+ RG M GYLK+ AT + G
Sbjct: 356 KSRQGVRYHLQSAVAVLDPETMQPVAADGEQIGEIMFRGNICMKGYLKNERATQEAFAGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G+M+PDGY+++KDRSKD+IISGGENISS E+E LY HP V AAV+ +PD
Sbjct: 416 WFHTGDLGVMYPDGYIKLKDRSKDIIISGGENISSVEVEDALYHHPQVLAAAVIAQPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV L+ G TE ++I +C+ + + VPK + F LP+T+TGK+QK
Sbjct: 476 WGETPCAFVELREGG-----TVTEAELIAFCKNNLAGFKVPKAIYF-GPLPRTSTGKIQK 529
Query: 542 YVL 544
+ L
Sbjct: 530 FEL 532
>gi|171319730|ref|ZP_02908819.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
gi|171095039|gb|EDT40054.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
Length = 550
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/538 (44%), Positives = 331/538 (61%), Gaps = 20/538 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTP+ F+ RAA + +I++ D TW +T+ R QLAS+L+ G+ G V+
Sbjct: 14 ANYVPLTPIDFLVRAAEVYGERLAIVHGDVRRTWGETHTRAKQLASALAQAGVARGDTVA 73
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PNIPAM E HF VPM+GA+ NTINTRLD ++ +L+H E+K++ VD + L
Sbjct: 74 ALLPNIPAMVEAHFGVPMAGAVLNTINTRLDISSVLFMLRHGEAKVLIVDTEYADLAHRA 133
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
P K+V + D + + P R A YE +A GDP ++W P +
Sbjct: 134 AREVP----GLKIVSVAD-----AMPADPARFAGAT---DYEAFVAGGDPDYAWTPPADE 181
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPMFH NGW F
Sbjct: 182 WDAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHAVYLWTLPMFHCNGWCFP 241
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDRPVRI 306
W A NVCLRKFDA TVF LIR +TH CGAPIV + ++++P + +D V
Sbjct: 242 WAVAARAGVNVCLRKFDAKTVFDLIRSERITHYCGAPIVQSAIANAPAEFRAGIDHTVHA 301
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
+ AG+ P V+ + + +GF + H YG TE+ G CA + W+ LP ERA L ARQG
Sbjct: 302 MVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAKQAHWDALPDDERARLNARQG 361
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
VR ++DP+T V DG+T GEI+ RG M GYLK+P+AT + G ++TG
Sbjct: 362 VRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKGYLKNPKATDEAFHGGWFHTG 421
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV PDP W E+P
Sbjct: 422 DLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVAMPDPKWGEVP 481
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
CAFV L+ G + TE++II +C+ + + VPK V F ELPKT+TGK+QK+ L
Sbjct: 482 CAFVELRDGASA-----TEEEIIAHCKQLLAGFKVPKVVRF-GELPKTSTGKIQKFQL 533
>gi|254451651|ref|ZP_05065088.1| AMP-dependent synthetase and ligase [Octadecabacter arcticus 238]
gi|198266057|gb|EDY90327.1| AMP-dependent synthetase and ligase [Octadecabacter arcticus 238]
Length = 546
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/551 (43%), Positives = 337/551 (61%), Gaps = 21/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PLTPL F+ERAA D +II+ ++ Y R QLAS+L+ GI
Sbjct: 10 LDRNPANHQPLTPLTFLERAAAVFPDHTAIIHGKLRRNYATFYARSRQLASALTQRGIGR 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PN PAM E H+ VPM G + ++INTRLDA I+ L H+ SK++ VD
Sbjct: 70 GDTVAAMLPNTPAMLECHYGVPMCGGVLHSINTRLDAAIIAFQLDHAMSKIIIVDAEFMP 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L+ E ++L ++ LV+ DD E + + A YE+ LA GDP F+W+
Sbjct: 130 LMQEALAL----AEVSPLVIQVDDPEYEGAKA-------AFDGGGYESFLADGDPAFAWL 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + +NYT GTT PKGVV ++ +++A + I + K +V LWTLPMFH N
Sbjct: 179 MPADEWDAISINYTSGTTGDPKGVVSHHRGAYLLAQGNAITTSMRKHAVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLD 301
GW F W + + T+VCLR+ A ++ + VTH+CGAPIV++LL ++P + LD
Sbjct: 239 GWCFPWTLSAIIGTHVCLRQVRAEPIWNALADDNVTHLCGAPIVMSLLIAAPVDARRTLD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+ TA +PPP +L ++ GF V+H YG TE G V W W+ LP E+A L
Sbjct: 299 HTVQFFTAAAPPPEKLLADMKTAGFDVTHLYGLTETYGPAVVNDWHESWSSLPNDEQARL 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR + L +D++DPET +V RDG T GE++ RG +M GY ++P AT K + G
Sbjct: 359 KSRQGVRYLPLEGLDVLDPETLHAVPRDGVTMGEVMFRGNVVMKGYFRNPVATKKAFEGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G++HPDGY+++KDRSKD+IISGGENISS EIE VLYS+P + AAVV P
Sbjct: 419 WFHSGDLGVVHPDGYIQLKDRSKDIIISGGENISSIEIEEVLYSYPSIEIAAVVAMPHEK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQ-YCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E PCAF+ G + + D ++ +CR R+ Y VP V + +P+T+TGK+Q
Sbjct: 479 WGETPCAFIEATLGQE------IDTDALRVWCRDRLAAYKVPGRFV-VTSVPRTSTGKIQ 531
Query: 541 KYVLGDIANSM 551
K+VL + A ++
Sbjct: 532 KFVLRERAKNL 542
>gi|307943573|ref|ZP_07658917.1| acyl-CoA synthetase [Roseibium sp. TrichSKD4]
gi|307773203|gb|EFO32420.1| acyl-CoA synthetase [Roseibium sp. TrichSKD4]
Length = 546
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/546 (42%), Positives = 337/546 (61%), Gaps = 20/546 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+ + AN L+PL F++R + D ++IY D +W +TY R +LASSL G
Sbjct: 5 FEAFEKTDANHVALSPLSFLKRTVSIFPDRVAVIYGDYQASWRETYERICKLASSLQRLG 64
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ G V+V+A N P ++ELHFAVPM GA+ NTINTRL+ T++ IL H ++K + D
Sbjct: 65 VGQGDTVAVMAANTPELFELHFAVPMIGAVLNTINTRLEVDTVAYILDHGDAKAIVTD-- 122
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
+ +V+ + P LV+ +I ++ P + TYE+++ GD F
Sbjct: 123 --TAFHKVMGPAIQSANRPLLVI-----DIVDAAGPGGKRLG---TQTYEDLIENGDAGF 172
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+W P + + LNYT GT+ PKGVV ++ +++++ + I W +P+ V L+++PMF
Sbjct: 173 AWQGPTDEWQALSLNYTSGTSGRPKGVVYHHRGSYLMSLGTPIAWELPRHPVYLYSVPMF 232
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAK 298
H NGW W ++ T VCLR A +FA I +HGVTH+ GAPIVL++L ++ + +
Sbjct: 233 HCNGWGHAWTMTLLAGTFVCLRAVTAKNIFAAIEEHGVTHLGGAPIVLSMLINAADEDKR 292
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
L PV+++TAG+PPPA VL T++LGF V YG TE G C W+ +W+ L A E+
Sbjct: 293 PLQHPVKVMTAGAPPPAAVLEATKALGFEVMQVYGLTETYGHVTQCLWREEWDDLSASEQ 352
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A +++ QGV E D++D ETG V DG+T+GEIV++G ++M GY KDP AT++
Sbjct: 353 AEVQSWQGVAFPMTEEADVLDRETGQPVPWDGETQGEIVLQGNTVMKGYYKDPNATAQAF 412
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
GR+ +GD + HP+GY++IKDR KDVIISGGENISS E+E VLY HP V AAVV +P
Sbjct: 413 AGGRFKSGDAAVRHPNGYIQIKDRLKDVIISGGENISSVEVEGVLYKHPAVAAAAVVAKP 472
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
D W E+PCAFV LK D + +++I + R + + PK VVF ELPKTATGK
Sbjct: 473 DEKWGEVPCAFVELKPDAD-----ISAEELIDFSRQNMAGFKRPKEVVF-GELPKTATGK 526
Query: 539 VQKYVL 544
+QK+VL
Sbjct: 527 IQKFVL 532
>gi|335419305|ref|ZP_08550360.1| AMP-dependent synthetase and ligase [Salinisphaera shabanensis
E1L3A]
gi|335421022|ref|ZP_08552052.1| AMP-dependent synthetase and ligase [Salinisphaera shabanensis
E1L3A]
gi|334893196|gb|EGM31414.1| AMP-dependent synthetase and ligase [Salinisphaera shabanensis
E1L3A]
gi|334896922|gb|EGM35064.1| AMP-dependent synthetase and ligase [Salinisphaera shabanensis
E1L3A]
Length = 544
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/553 (42%), Positives = 331/553 (59%), Gaps = 19/553 (3%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+ L N AN L+P+ F+ + + ++I+ + +W +TYRRC QLAS+L G
Sbjct: 7 FESLPQNAANYAALSPISFLAWSGEVYPERTALIHGELRQSWGETYRRCRQLASALDKRG 66
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G V+++APNIPA YE+HFA M GA+ N +N RLDA T++ +L+ E+K+VFVD
Sbjct: 67 IGAGDTVAIMAPNIPATYEMHFAPAMVGAVLNALNVRLDAATLAFMLEFGEAKMVFVDRA 126
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
+ ++ E + P V+ DD + SP I YE +A+GD F
Sbjct: 127 FAPVMAEAIG----QMDNPPTVVDIDDPVYDGNESPIGEI-------EYEAFVAEGDADF 175
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
W P+ + + + LN+T GTT PKGVV ++ ++ A+ + + W +P +V LWTLPMF
Sbjct: 176 QWQLPEDEWNAISLNFTSGTTGNPKGVVYHHRGAYLNAMTNAMAWDMPTHTVYLWTLPMF 235
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK-- 298
H NGW F W A TNVCLR+ A + + +HGVTH CGAPIV ++L ++ E K
Sbjct: 236 HCNGWCFPWTLAAKAGTNVCLRQVAADPIIEAMTEHGVTHYCGAPIVHSMLVNADEQKLA 295
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
+++ V L AG+ PPA ++ E +GF ++H YG TE G CA W + ER
Sbjct: 296 GIEQTVYGLVAGAAPPAAMIEGMERIGFKLTHVYGLTETYGPAALCAKHESWEDVSLDER 355
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
L RQGVR + +VD +TG V DG+T GE+V G +M GYLK+P+AT +
Sbjct: 356 VRLNGRQGVRYPTQAALTVVDQDTGEIVPHDGETMGELVFAGNIVMKGYLKNPDATDEAF 415
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
+G Y+TGD+G + PDGY++I DR+KDVIISGGENISS E+ESVL HP V +AVV +P
Sbjct: 416 AEGWYHTGDLGYIEPDGYIKIADRAKDVIISGGENISSLEVESVLSRHPAVAASAVVAKP 475
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
D W E PCAF+ L+ G ++ TE DII YCR + ++ PKTVVF LP T+TGK
Sbjct: 476 DEKWGETPCAFIELRPGEEA-----TEADIIAYCREHMAKFKCPKTVVF-GPLPTTSTGK 529
Query: 539 VQKYVLGDIANSM 551
VQKY L A+ +
Sbjct: 530 VQKYELRSQADDL 542
>gi|115358463|ref|YP_775601.1| acyl-CoA synthetase [Burkholderia ambifaria AMMD]
gi|115283751|gb|ABI89267.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria AMMD]
Length = 550
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/538 (44%), Positives = 332/538 (61%), Gaps = 20/538 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTP+ F+ RAA + ++++ D TW +T++R QLAS+L+ G+ G V+
Sbjct: 14 ANYVPLTPIDFLVRAAEVYGERLAVVHGDVRRTWGETHKRAKQLASALAQAGVARGDTVA 73
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PNIPAM E HF VPM+GA+ NTINTRLD ++ +L+H E+K++ VD + L
Sbjct: 74 AVLPNIPAMVEAHFGVPMAGAVLNTINTRLDISSVLFMLRHGEAKVLIVDTEYADLAHRA 133
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
P K+V + D + + P R A YE +A GDP ++W P +
Sbjct: 134 AREVP----GLKIVSVAD-----AMPADPARFAGAT---DYEAFVAGGDPDYAWTPPADE 181
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
+ + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPMFH NGW F
Sbjct: 182 WEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHAVYLWTLPMFHCNGWCFP 241
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDRPVRI 306
W A NVCLRKFDA TVF LIR +TH CGAPIV + ++++P + +D V
Sbjct: 242 WAVAARAGVNVCLRKFDAKTVFDLIRSERITHYCGAPIVQSAIANAPAEFRAGIDHTVHA 301
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
+ AG+ P V+ + + +GF + H YG TE+ G CA + W+ LP ERA L ARQG
Sbjct: 302 MVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAKQAHWDALPDDERARLNARQG 361
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
VR ++DP+T V DG+T GEI+ RG M GYLK+P+AT + G ++TG
Sbjct: 362 VRYHLEAGATVLDPDTMTPVPADGETLGEIMFRGNICMKGYLKNPKATDEAFHGGWFHTG 421
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV PDP W E+P
Sbjct: 422 DLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVAMPDPKWGEVP 481
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
CAFV L+ G + TE++I+ +C+ + + VPK V F ELPKT+TGK+QK+ L
Sbjct: 482 CAFVELREGASA-----TEEEIVAHCKQLLAGFKVPKAVRF-GELPKTSTGKIQKFQL 533
>gi|86137390|ref|ZP_01055967.1| AMP-binding protein [Roseobacter sp. MED193]
gi|85825725|gb|EAQ45923.1| AMP-binding protein [Roseobacter sp. MED193]
Length = 547
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/551 (41%), Positives = 332/551 (60%), Gaps = 21/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN PLTPL + RAA + P++IY + T++ Y RC +LAS+L+ G+ P
Sbjct: 15 LEKTAANYVPLTPLSHLRRAAHVFGETPAVIYGNHRKTYAAYYDRCTRLASALAGMGVKP 74
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+ + PN+PA E HF VP GA+ NTINTRLD T++ I H +K+ VD +
Sbjct: 75 GDVVATLIPNLPAQAEAHFGVPACGAVLNTINTRLDVDTVAYIFDHGGAKVALVD--TEF 132
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L L ++ K P L+ + D + ++ P TYE++L + F W+
Sbjct: 133 LPLAEAAVERMEGKAPLLIEVPDPQAGFEATGRHP---------TYEDVLGNAEHDFEWI 183
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + + LNYT GTT PKGVV ++ +++ + ++I W + V L +P+FH N
Sbjct: 184 MPQDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVISWRMVMNPVYLAIVPLFHCN 243
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW+ TW V+G T VC R ++ I HGVTH GAPIVLNLL ++ E ++ D
Sbjct: 244 GWNHTWMMPVLGGTLVCCRNITPGAIYDAIGDHGVTHFGGAPIVLNLLVNAKEEERRAFD 303
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWK-PKWNKLPARERAS 360
V + TAG+PP L + E+LGF V+ YG TE G C WK KW+ L + RA+
Sbjct: 304 HTVEVFTAGAPPAPATLQKIETLGFHVTQVYGLTETYGHVTECLWKGDKWDDLDHQGRAA 363
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
+KARQGV + + ++D + + ++G +G+IVMRG S+M GYLK+PEAT++ +
Sbjct: 364 IKARQGVAFPMMDHITVLDDDMK-QIPKNGTDQGQIVMRGNSVMKGYLKNPEATAEAFEG 422
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +++GD+ + HPDGY++I DR+KD+IISGGENISS E+E VL HP VN AAVV +PD
Sbjct: 423 GYFHSGDIAVQHPDGYIQIADRAKDIIISGGENISSVEVEGVLMGHPAVNLAAVVAKPDD 482
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV LK G + E +I + R I + PK V+F ELPKT+TGK+Q
Sbjct: 483 KWGEVPCAFVELKEGEE-----VDEAGLIAFARETIAGFKAPKRVIF-QELPKTSTGKIQ 536
Query: 541 KYVLGDIANSM 551
K+ L +IA S+
Sbjct: 537 KFELREIAKSI 547
>gi|254482321|ref|ZP_05095561.1| AMP-binding enzyme, putative [marine gamma proteobacterium
HTCC2148]
gi|214037326|gb|EEB77993.1| AMP-binding enzyme, putative [marine gamma proteobacterium
HTCC2148]
Length = 540
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/547 (41%), Positives = 339/547 (61%), Gaps = 22/547 (4%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L+ AN L+P+ ++R + P+ ++ W + +RC +LAS+L++ G++
Sbjct: 7 ELEKCAANHTALSPVSILKRVERVHPELPAQVHGSIRRNWGEVAQRCKRLASALANHGVS 66
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G V++IAPNIP E A+PM GA+ N N RLDA TI+ IL+H E+K + VD S
Sbjct: 67 SGDTVALIAPNIPEALECALAIPMLGAVLNANNVRLDAATIAYILEHGEAKALLVDTEFS 126
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPP-PRIPPADFVDTYENMLAKGDPQFS 181
S+ E + ++ + +L+ D I + P RI TY+ +LA+GDP+F+
Sbjct: 127 SMAKEALK------QSGRDILVID---IQDTQGPGGERIGAL----TYDELLAQGDPEFA 173
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
+ P + D + LNYT GTT PKGVV ++ + V+++I W +P V LWTLP+FH
Sbjct: 174 YTLPNDEWDALALNYTSGTTGRPKGVVYSHRGAWTNTVNNVITWEMPHHPVYLWTLPLFH 233
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQ 299
NGW F W ++ T+V LR A ++ GVTH+CGAPI+++++S + + ++
Sbjct: 234 CNGWCFPWTITLLAGTHVFLRSPKADAIYNAFAGEGVTHLCGAPIIMSMISGAAPQDQRE 293
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+ V+++TA +PPPA V+ E++G ++H YG TE+ G V CA KP W +L +RA
Sbjct: 294 FTQHVKMMTAAAPPPASVIASIEAMGISITHVYGLTEVYGPAVVCAEKPSWRELSVDDRA 353
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+LKARQGV +V +++PETG V DGQT GEIV RG +M GYLK+PE T+K K
Sbjct: 354 NLKARQGVAYELEEDVRVLNPETGQPVPWDGQTLGEIVFRGNIVMKGYLKEPEETAKAFK 413
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
DG +++GD+ + H DGY+EI+DRSKD+IISGGENISS E+E LYSHP V+ AAVV P+
Sbjct: 414 DGWFWSGDIAVHHSDGYIEIRDRSKDIIISGGENISSIEVEKALYSHPAVSLAAVVAMPN 473
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+PCAFV L G + TE+ ++ + ++++ + PK V+F ELPKT TGK+
Sbjct: 474 EKWGEVPCAFVELAEGAE-----VTEQALLDHAKSKLASFQRPKKVIF-GELPKTTTGKI 527
Query: 540 QKYVLGD 546
+K L D
Sbjct: 528 RKNELRD 534
>gi|313110912|ref|ZP_07796755.1| Putative Acyl-CoA synthetase [Pseudomonas aeruginosa 39016]
gi|386066137|ref|YP_005981441.1| acyl-CoA synthetase [Pseudomonas aeruginosa NCGM2.S1]
gi|310883257|gb|EFQ41851.1| Putative Acyl-CoA synthetase [Pseudomonas aeruginosa 39016]
gi|348034696|dbj|BAK90056.1| acyl-CoA synthetase [Pseudomonas aeruginosa NCGM2.S1]
Length = 549
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/547 (42%), Positives = 332/547 (60%), Gaps = 16/547 (2%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PN AN PL+PL F++RAA +++Y Y++ Q + R LAS+L G+
Sbjct: 10 LAPNEANHVPLSPLSFLKRAAQVYPQRDAVVYGARRYSYRQLHERSCALASALERVGVQA 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+++APNIP M E H+ VP +GA+ IN RL+AR+I+ IL+H ++++ D +
Sbjct: 70 GERVAILAPNIPEMLEAHYGVPGAGAVLVCINIRLEARSIAFILRHCAARVLICDREFGA 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ + +++ P LV I DD+ R A +D YE LA+GDP
Sbjct: 130 VAQQALAML---DAPPLLVGIDDDQA--------ERADLAHDLD-YEAFLAQGDPGRPLS 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+++ + +NYT GTT PKGVV ++ ++ A + + + +SV LWTLPMFH N
Sbjct: 178 APQNEWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGALIFQLGPRSVYLWTLPMFHCN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GWS TW + G T+VCLRK + A I +H VTH+ AP+V+++L + A P
Sbjct: 238 GWSHTWAVTLSGGTHVCLRKVQPDAINAAIAEHAVTHLSAAPVVMSMLIHAEHASVPTVP 297
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
V ++T G+ PP+ V+ E+ GF ++H YG TE G + C W+P ++LP RA +
Sbjct: 298 VSVITGGAAPPSAVIAAMEARGFSITHAYGMTESYGPSTLCLWQPGVDELPLEARAQFMS 357
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQGV L E ++D +TG V DG+T GE+V+RG ++M GYL +PEAT + DG
Sbjct: 358 RQGVAHPMLEEATVLDTDTGRPVPADGRTLGELVVRGNTVMKGYLHNPEATRAALADGWL 417
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
+TGD+ ++HPDGY+EIKDR+KD+IISGGENISS EIE VLY HP V EAAVV RPD W
Sbjct: 418 HTGDLAVLHPDGYVEIKDRAKDIIISGGENISSLEIEEVLYQHPEVVEAAVVARPDSRWG 477
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E P AFV+L+ TT D++++CR R+ + P+ V + ELPKTATGK+QK+V
Sbjct: 478 ETPHAFVALRADALP---RTTGDDLVRWCRERLAHFKAPRHVT-LTELPKTATGKIQKFV 533
Query: 544 LGDIANS 550
L + A
Sbjct: 534 LREWARQ 540
>gi|390448446|ref|ZP_10234066.1| AMP-dependent synthetase and ligase [Nitratireductor aquibiodomus
RA22]
gi|389666187|gb|EIM77642.1| AMP-dependent synthetase and ligase [Nitratireductor aquibiodomus
RA22]
Length = 550
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/555 (43%), Positives = 338/555 (60%), Gaps = 15/555 (2%)
Query: 1 MDR-LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSF 59
DR L NPAN PLTPL +ERAA + +II+ T++ + R L+LAS+L+
Sbjct: 8 FDRDLDRNPANFQPLTPLVLLERAAKVFPNEVAIIHGGQRVTYATFWERSLKLASALARH 67
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
GI G VSV+ N P M E H VPM+ A+ +++NTRLDA I+ L H+ES++V VD
Sbjct: 68 GIGKGDTVSVMLSNTPPMLEAHHGVPMTKAVLHSLNTRLDAAIIAFQLDHAESRVVIVDR 127
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
S ++ E ++L ++ LV+ DD E + P P+ VD YE +A GD
Sbjct: 128 EFSDVMKEALAL----AQVKPLVIDYDDPEFGGDA-PYPKGERIGSVD-YEAFVASGDAG 181
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F+W P + D + LNYT GTT PKGVV ++ ++A + + + + +V LWTLPM
Sbjct: 182 FTWSMPDDEWDAIALNYTSGTTGNPKGVVYHHRGAALMAYANTVHAGLSRGAVYLWTLPM 241
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A+ T+VCLR A ++ I +HGVTH+CGAP+V++ L ++PEA++
Sbjct: 242 FHCNGWCFPWTLALTAGTHVCLRWVRAKPMYDAIAEHGVTHLCGAPVVMSALLNAPEAEK 301
Query: 300 LD--RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
D V TA +PPP VL GF V+H YG TE G V WK +W+ L
Sbjct: 302 RDFSHTVTFNTAAAPPPESVLSAMAEAGFTVTHLYGLTETYGPAVVNEWKGEWDALDGAG 361
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A+ KARQGVR L + ++DPET DG+T GE++ RG +M GYLK+ +AT +
Sbjct: 362 QAARKARQGVRYAALEGLTVMDPETMTETPPDGETIGEVMFRGNIVMKGYLKNRKATDEA 421
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G +++GD+G+MHPDGY+++KDRSKD+IISGGENISS E+E LY HP + VV +
Sbjct: 422 FAGGWFHSGDLGVMHPDGYIQLKDRSKDIIISGGENISSIEVEDALYRHPAIAACGVVAK 481
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
D W E P AFV LK G D+ + ++II +CR+ + + PKTVVF E+PKT+TG
Sbjct: 482 ADEKWGETPVAFVELKPGRDA-----SAEEIIAHCRSLLAHFKCPKTVVF-SEIPKTSTG 535
Query: 538 KVQKYVLGDIANSMS 552
K+QK+ L + A +S
Sbjct: 536 KIQKFRLREQARELS 550
>gi|194291808|ref|YP_002007715.1| acyl-CoA synthetase [Cupriavidus taiwanensis LMG 19424]
gi|193225712|emb|CAQ71658.1| putative AMP-dependent synthetase and ligase [Cupriavidus
taiwanensis LMG 19424]
Length = 557
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 243/548 (44%), Positives = 330/548 (60%), Gaps = 31/548 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PLTP+ F+ RAA D +I++ W TY R +LAS+L+ G+
Sbjct: 22 LARNAANFVPLTPIDFLVRAAEVYGDRLAIVHGPLRQNWRDTYARARRLASALARAGVGK 81
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----H 119
G V+ + PN PAM E HF VPM+GA+ N +N RLDA + +L+H E++++ D
Sbjct: 82 GDTVAALLPNTPAMVEAHFGVPMAGAVLNALNIRLDAANLLFMLRHGEARVLLADTEFAD 141
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT-YENMLAKGDP 178
L+ + LE+ P L +I + ++P F DT YE L GDP
Sbjct: 142 LARQMALEL----------PGLKVIAVHDVLGPQATP--------FGDTDYEAFLDGGDP 183
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
++W P + D + LNYT GTT PKGVV ++ I AV ++++W +PK V LWTLP
Sbjct: 184 AYAWQMPADEWDAIALNYTSGTTGDPKGVVYHHRGAAINAVSNILEWDLPKHPVYLWTLP 243
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA- 297
MFH NGW F W A NVCLRKF+ VF L+R+ GVTH C APIV L ++P A
Sbjct: 244 MFHCNGWCFPWTVAARAGVNVCLRKFEPRLVFDLMREEGVTHYCAAPIVHTALVNAPTAW 303
Query: 298 -KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
+ + PVR + AG+PPPA VL + E++GF ++H YG TE+ G CA + W+ L +
Sbjct: 304 REGVRGPVRGMVAGAPPPAAVLAQMEAMGFELTHVYGLTEVYGPAAVCAEQDDWSSLSEQ 363
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
+RA KARQGVR ++V ++DP++ V DG+T GEI+ RG M GYLK+ +AT +
Sbjct: 364 DRAVKKARQGVRYHLQSQVAVLDPDSMQPVPADGETIGEIMFRGNICMKGYLKNEKATRE 423
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
G ++TGD+G+ PDGY++IKDRSKD+IISGGENISS E+E LY HP V AAVV
Sbjct: 424 AFAGGWFHTGDLGVCMPDGYIKIKDRSKDIIISGGENISSVEVEDALYRHPAVLAAAVVA 483
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
+PD W E PCAFV LK G + +D+I +CR + + VPK V F LPKT+T
Sbjct: 484 QPDAKWGETPCAFVELKDGAS-----VSAEDLIAHCRTLLAGFKVPKAVYF-GPLPKTST 537
Query: 537 GKVQKYVL 544
GK+QK+ L
Sbjct: 538 GKIQKFEL 545
>gi|431802716|ref|YP_007229619.1| acyl-CoA synthetase [Pseudomonas putida HB3267]
gi|430793481|gb|AGA73676.1| acyl-CoA synthetase [Pseudomonas putida HB3267]
Length = 564
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/550 (42%), Positives = 331/550 (60%), Gaps = 16/550 (2%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L PN AN PL+PL F++RAA +++Y Y + Q + R LAS+L G+
Sbjct: 23 ELAPNEANHVPLSPLSFLKRAAQVYPQRDAVVYGRRRYNYLQLHERSRALASALERVGVQ 82
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
PG V+++APNIP M E H+ VP +GA+ IN RL+AR+I+ IL+H +K++ D
Sbjct: 83 PGERVAILAPNIPEMLEAHYGVPGAGAVLVCINIRLEARSIAFILRHCAAKVLICDREFG 142
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ + +++ P LV I DD+ R A +D YE LA+GDP
Sbjct: 143 AVASQALAML---DAPPLLVGIDDDQA--------ERADLAHDLD-YEAFLAQGDPARPL 190
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P+++ + +NYT GTT PKGVV ++ ++ A + + + +SV LWTLPMFH
Sbjct: 191 SAPQNEWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGALIFQLGPRSVYLWTLPMFHC 250
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
NGWS TW + G T+VCLRK + A I +H VTH+ AP+V+++L + A
Sbjct: 251 NGWSHTWAVTLSGGTHVCLRKVQPDAINAAIAEHAVTHLSAAPVVMSMLIHAEHASAPPV 310
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
PV ++T G+ PP+ V+ E+ GF ++H YG TE G + C W+P ++LP RA
Sbjct: 311 PVSVITGGAAPPSAVIAAMEARGFNITHAYGMTESYGPSTLCLWQPGVDELPLEARAQFM 370
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
+RQGV L E ++D +TG V DG T GE+V+RG ++M GYL +PEAT + +G
Sbjct: 371 SRQGVAHPMLEEATVLDTDTGRPVPADGLTLGELVVRGNTVMKGYLHNPEATRAALANGW 430
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
+TGD+ ++HPDGY+EIKDR+KD+IISGGENISS EIE VLY H V EAAVV RPD W
Sbjct: 431 LHTGDLAVLHPDGYVEIKDRAKDIIISGGENISSLEIEEVLYQHSEVVEAAVVARPDSRW 490
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E P AFV+L+ + TE D+I++CR R+ + P+ V + ELPKTATGK+QK+
Sbjct: 491 GETPHAFVTLRADALA---TVTEADLIRWCRERLAHFKAPRHVS-LTELPKTATGKIQKF 546
Query: 543 VLGDIANSMS 552
VL + A
Sbjct: 547 VLREWARQQE 556
>gi|71905868|ref|YP_283455.1| acyl-CoA synthetase [Dechloromonas aromatica RCB]
gi|71845489|gb|AAZ44985.1| AMP-dependent synthetase and ligase [Dechloromonas aromatica RCB]
Length = 545
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 246/550 (44%), Positives = 344/550 (62%), Gaps = 21/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ NPAN PL+PL F+ER+A S+I YTW ++Y R QLAS+L S GI
Sbjct: 9 LERNPANYVPLSPLSFLERSAFIYPKRISVIQGARQYTWKESYDRARQLASALKSRGIGK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PN +M+E HF +PM GA+ NT+NTRLDA I+ +L H E+K++ D S
Sbjct: 69 GDTVAVMLPNTASMFECHFGIPMIGAVLNTLNTRLDAEAIAFMLAHGEAKVLITDPEFSK 128
Query: 124 LLLEVVSLFPPHSKTPK-LVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ + L + PK LV+ + D + + S + YE+ L +G+P F+W
Sbjct: 129 VVKPALELL----EGPKPLVIDSLDPDYTEGESLGEK--------DYESFLNEGEPDFAW 176
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P+ + D + LNYT GTT PKGVV ++ ++ + ++I W +P SV LWTLPMFH
Sbjct: 177 QLPEDEWDAIALNYTSGTTGNPKGVVYHHRGAYLNSASNIISWGMPPHSVYLWTLPMFHC 236
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQL 300
NGW F W A T+VCLR+ D +F LI++H V+HMCGAPIV ++ ++PE + +
Sbjct: 237 NGWCFPWTLAANAGTSVCLRRVDPVLIFGLIKEHKVSHMCGAPIVYGMMINAPETLREGI 296
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
V L AG+ PPA ++ + +GF ++H YG TE G CA +P+W++LP +A+
Sbjct: 297 AHTVNGLIAGAAPPAAIIEGAQRMGFNITHVYGLTETYGPASVCAKQPEWDRLPIDLQAA 356
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
RQGVR + ++DP + V DG+T GEI+ RG +M GYLK+ +A+ +
Sbjct: 357 RNGRQGVRYHMQEAIAVLDPVSMEPVPWDGETMGEIMFRGNLVMKGYLKNEKASEEAFAG 416
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+ ++H DGY++IKDRSKDVIISGGENISS E+E VLY HP V AAVV +PD
Sbjct: 417 GWFHTGDLAVVHSDGYVKIKDRSKDVIISGGENISSLEVEDVLYRHPAVIAAAVVAKPDE 476
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+P AF+ LKT TE +II++CRA + R+ VPK VVF ELPKT+TGK+Q
Sbjct: 477 KWGEVPAAFIELKTDAK-----CTEAEIIEHCRAHLARFKVPKQVVF-GELPKTSTGKIQ 530
Query: 541 KYVLGDIANS 550
KYVL ANS
Sbjct: 531 KYVLRQHANS 540
>gi|356499054|ref|XP_003518359.1| PREDICTED: LOW QUALITY PROTEIN: medium-chain-fatty-acid--CoA
ligase-like [Glycine max]
Length = 542
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 255/565 (45%), Positives = 335/565 (59%), Gaps = 46/565 (8%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD L AN PL+P+ F+ ++ L LA ++
Sbjct: 1 MDNLPKCQANYSPLSPVTFLTSSSI----------------------HSLNLARNIMML- 37
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
VSV+APNIPAMYE+HFAVPM+GA+ NTINTRLDA I+ IL+HSE+K++FVD+
Sbjct: 38 -----XVSVLAPNIPAMYEMHFAVPMAGAVLNTINTRLDANNIATILRHSEAKVLFVDYE 92
Query: 121 ---SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD-TYENMLAKG 176
+ LE++ HS P L+LI D I+S +S FV+ YE ++
Sbjct: 93 YVPKAKEALELLIAKKYHSSPPLLILIDD---INSPTS-------IQFVELEYEQLVYND 142
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLID--WVVPKQSVLL 234
D F + + P+ LNYT GTTSA KGVV ++ ++ + + W + + V L
Sbjct: 143 DSNFFPEKIHDEWAPIALNYTSGTTSASKGVVYSHRGAYLSSSTLSLILGWEMSTEPVYL 202
Query: 235 WTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNL-LSS 293
WTLPMF GW+FTWG A TNVCLR A ++ I H VTH C APIV N+ L +
Sbjct: 203 WTLPMFRCYGWTFTWGVAARRGTNVCLRNVSAYDIYKNISLHHVTHXCCAPIVFNIILEA 262
Query: 294 SP-EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNK 352
P E ++ V ILT G+P P ++ + ESLGF V H YG TE G + C W+ WN+
Sbjct: 263 KPSERFEIKSIVEILTGGAPSPPSLIEKIESLGFHVMHAYGLTEATGSVLVCEWQQHWNQ 322
Query: 353 LPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPE 412
LP E+A LKAR GV + L +VD+ +T SV RDG+T GEIV+RG S+M GY KD +
Sbjct: 323 LPKDEQAQLKARLGVIILTLEDVDVKKVDTMESVSRDGKTMGEIVLRGSSIMKGYFKDLD 382
Query: 413 ATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEA 472
+T K DG ++TGD G++H DGYLEIKDRSK VIISGGENISS ++E VLY HP V EA
Sbjct: 383 STLKAFSDGWFHTGDAGVIHKDGYLEIKDRSKYVIISGGENISSVDLEYVLYKHPRVLEA 442
Query: 473 AVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELP 532
AVV P P W E PCAFV LK TE D+I YCR +P +MVPK V F++ELP
Sbjct: 443 AVVAMPHPRWGESPCAFVVLKKFXGDKMNDLTEADLIGYCRKNMPPFMVPKVVKFVEELP 502
Query: 533 KTATGKVQKYVLGDIANSMSMSHSR 557
KT+TGK++K+ L D + +S ++
Sbjct: 503 KTSTGKIKKFELRDKPKNFKVSDNQ 527
>gi|56479161|ref|YP_160750.1| acyl-CoA synthetase [Aromatoleum aromaticum EbN1]
gi|56315204|emb|CAI09849.1| probable CoA ligase (AMP-forming) [Aromatoleum aromaticum EbN1]
Length = 550
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 243/552 (44%), Positives = 339/552 (61%), Gaps = 24/552 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ N AN PLTPL FIER+A D ++I+ YTW ++Y R +LAS+L G+
Sbjct: 13 LEKNAANYVPLTPLTFIERSAYVYPDRIAVIHGARRYTWLESYTRSRRLASALKQLGVGK 72
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V+V+ N P M+E HF VP +GA+ NTINTRL+ T++ +L H+E+K++ D +
Sbjct: 73 NDTVAVVLNNTPEMFECHFGVPATGAVLNTINTRLEPETVAFMLNHAEAKVLITDREFAR 132
Query: 124 LLLEVVSLFPPHSKTPKLVLI-TDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQF 180
++ + + L + P L++I DD E S P D V T YE +L G P F
Sbjct: 133 VMAKAIEL----ANRPDLIVIDVDDPEYSG---------PGDRVGTLEYEALLETGSPDF 179
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
++ +P + D + LNYT GTT PKGVV ++ ++ A+ +++ W +P SV LWTLPMF
Sbjct: 180 AFEQPADEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAMSNIVSWGMPPHSVYLWTLPMF 239
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--K 298
H NGW F W A TNVCLR+ D +F IR+HGVTH CGAPIV ++L+++PE+ +
Sbjct: 240 HCNGWCFAWTMAANAGTNVCLRRVDPRLIFEAIREHGVTHYCGAPIVHSMLANAPESWRE 299
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
+D + L A +PPPA V+ +G ++H YG TE G CA +W LP E+
Sbjct: 300 GIDHKMYGLVAAAPPPAAVIEGMAKIGIDLTHVYGLTETYGPAAVCAKHDEWKDLPLAEQ 359
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
+L RQGVR + ++DP+T V D QT GEI+ RG +M GYLK+P+AT +
Sbjct: 360 IALNGRQGVRYHAQEGITVLDPQTMEPVPWDNQTMGEIMFRGNLVMKGYLKNPDATEESF 419
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
+ G Y+TGD+ +M DGY++IKDRSKDVIISGGENISS E+E LY HP V AAVV P
Sbjct: 420 RGGWYHTGDLAVMQADGYVKIKDRSKDVIISGGENISSIEVEDALYKHPAVMAAAVVALP 479
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
DP W E+P AFV L+ GT TE +++ +CR + + PK ++F LPKT+TGK
Sbjct: 480 DPKWGEVPAAFVELREGT-----TVTEAELVAHCREHLAGFKSPKKIIF-GPLPKTSTGK 533
Query: 539 VQKYVLGDIANS 550
+QK+VL + A S
Sbjct: 534 IQKFVLREQAKS 545
>gi|294084932|ref|YP_003551692.1| acyl-CoA synthase [Candidatus Puniceispirillum marinum IMCC1322]
gi|292664507|gb|ADE39608.1| acyl-CoA synthase [Candidatus Puniceispirillum marinum IMCC1322]
Length = 538
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/545 (42%), Positives = 334/545 (61%), Gaps = 20/545 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L N AN PL+PL FI+R D ++IY D Y+WS+TY RC LAS+L G+
Sbjct: 6 EALAKNKANYVPLSPLSFIQRTTDLFGDRTALIYGDRRYSWSETYDRCRALASALVKMGL 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
G VSVIA N P M+E H+ +PM+G + NT+NTR++A TI+ IL +S+S+L+ VD
Sbjct: 66 GLGDTVSVIAANTPEMFEAHYGIPMAGCVLNTLNTRIEAETIAYILDNSDSRLLIVD--- 122
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
++ VV+ + ++ I D + P I D YE +A GD +
Sbjct: 123 TAFHETVVAALKLLDRDIPVIDIRD-----PALGDVPHIGDRD----YEAFIATGDKDYD 173
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P+ + + L+YT GT+ PKGVV ++ ++++V ++ W +P+ L+ +PMFH
Sbjct: 174 WELPEDEWQAIALSYTSGTSGRPKGVVYHHRGSYLMSVGTVTAWELPRHPTYLYVVPMFH 233
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK--Q 299
NGW W A++ AT V R A ++F I KH +TH GAPIVL+LL ++PE +
Sbjct: 234 CNGWGHAWTMALMAATIVLTRTITAASIFEDIEKHKITHFGGAPIVLSLLVNAPEDTRPK 293
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
LD +++LTAG+PPPA +L +T ++G V YG TE G C W+ +W+ L E+A
Sbjct: 294 LDYKIKVLTAGAPPPAAMLEKTAAMGLEVMQVYGLTETYGHVTQCLWRAEWDALTFAEQA 353
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+++ QG+ + +V+ TG V RDG+T+GEIV+RG +M GY KD EATS M+
Sbjct: 354 DIQSWQGIAFPVVEGSAVVESATGKEVPRDGETQGEIVVRGNVVMKGYYKDAEATSAAMR 413
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
DG +Y+GD + H +GY++IKDR KDVIISGGENISS E+E LY HP V AAVV +PD
Sbjct: 414 DGWFYSGDAAVWHKNGYVQIKDRLKDVIISGGENISSVEVEGYLYRHPDVIAAAVVAKPD 473
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+P AFV L+ G+ TE +++++CR ++ + PK + F ELPKT+TGK+
Sbjct: 474 DKWGEVPYAFVELRD-----GVTITEAELLEWCRGQMAGFKRPKAIKF-GELPKTSTGKI 527
Query: 540 QKYVL 544
QK+VL
Sbjct: 528 QKFVL 532
>gi|126731106|ref|ZP_01746914.1| AMP-dependent synthetase and ligase [Sagittula stellata E-37]
gi|126708408|gb|EBA07466.1| AMP-dependent synthetase and ligase [Sagittula stellata E-37]
Length = 541
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 244/550 (44%), Positives = 329/550 (59%), Gaps = 20/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ N AN PLTPL F+ RA D +++Y T+++ R +LAS L+ G+ P
Sbjct: 10 LERNAANYVPLTPLSFLNRAVQIWPDHLAVVYGPHRKTYAEYAERISRLASGLTGLGVEP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+ I PNIPA E HF VP GA+ N INTRLD TIS IL H E+K+V D
Sbjct: 70 GDVVATILPNIPAQAEAHFGVPACGAVLNAINTRLDPDTISYILDHGEAKVVLCDPQFLP 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+L E S+ P++V + DD S D++ YE++LA GDP F+W+
Sbjct: 130 VLAEAFDRM--ESEPPQVVEVPDDHAGVHRHS--------DYL-QYEDLLANGDPDFAWI 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + + LNYT GTT PKGVV ++ ++ A+ ++ W + V L +P+FH N
Sbjct: 179 MPEDEWESIALNYTSGTTGRPKGVVYHHRGAYLNAMGQVLSWRIVLHPVYLTIVPLFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW TW VG T VC R A ++F I GVTH GAPIVLN L ++PE ++ D
Sbjct: 239 GWCHTWMMPAVGGTIVCCRDVRADSIFNAIADEGVTHFGGAPIVLNTLINAPEDQKRAFD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V + TAG+PP L E +GF V+ YG TE G C W+ +W+ + RA+
Sbjct: 299 HVVEVFTAGAPPAPATLAAIEPMGFNVTQVYGLTETYGPGTECTWQSRWDHMEGEARAAQ 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGV L +D++D E G + RDG+TRGEIV RG +M GYLK+P AT + KDG
Sbjct: 359 KSRQGVAMPFLEPMDVLD-EAGAPIARDGKTRGEIVFRGNGVMKGYLKNPRATKEAFKDG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+ +MHPD YL+I DR+KD+IISGGENISS E+E VL +HP V AVV +PD
Sbjct: 418 LFHSGDIAVMHPDNYLQIADRAKDIIISGGENISSVEVEGVLMAHPAVLLCAVVAKPDDK 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK G D+ +E D+I + R R+ + PK VVF ELPKT+TGK+QK
Sbjct: 478 WGEVPCAFVELKDGRDA-----SEADLIAFARERLAGFKTPKKVVF-QELPKTSTGKIQK 531
Query: 542 YVLGDIANSM 551
+ L A M
Sbjct: 532 FELRTQAKDM 541
>gi|238024592|ref|YP_002908824.1| acyl-CoA synthetase [Burkholderia glumae BGR1]
gi|237879257|gb|ACR31589.1| acyl-CoA synthetase [Burkholderia glumae BGR1]
Length = 557
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 246/545 (45%), Positives = 323/545 (59%), Gaps = 24/545 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN LTP+ FI RAA ++++ YTWS+ Y R +LA +L+ GI
Sbjct: 9 LGRREANHVALTPIDFIARAAEVYGSRLAVVHGAQRYTWSEAYERARRLAGALAQAGIGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIP M + HF VPM+GA+ N INTRLDA +I +L+H E+KL+ VD +
Sbjct: 69 GDTVAVVLPNIPPMIDAHFGVPMAGAVLNAINTRLDAASILFMLRHGEAKLLIVDTEYAE 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADF--VDTYENMLAKGDPQFS 181
L V P ++V + D PA F YE LA GDP ++
Sbjct: 129 LARRVAQALP----GLRIVCVADALPAD----------PASFGGATDYEAFLASGDPAYA 174
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + D + LNYT GTT PKGVV ++ ++ A+ +L++W +PK +V LWTLPMFH
Sbjct: 175 WAPPADEWDAIALNYTSGTTGEPKGVVYHHRGAYLAALSNLLEWDMPKHAVYLWTLPMFH 234
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A NVCLRKFD +VF LIR+ VTH GAPIV L+ +P +
Sbjct: 235 CNGWCFPWAVAARAGVNVCLRKFDPRSVFELIRRERVTHYSGAPIVHGALADAPAEWRAG 294
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+D V AG+ P V+ + +++GF + H YG TEI G CA + W LP E A
Sbjct: 295 IDHLVHAQVAGAAPAPAVIAKMKAIGFELLHVYGLTEIYGPATVCAEQQHWAALPDDEAA 354
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKARQGVR ++DP+T SV DG+T GEI+ RG M GYLK+P AT +
Sbjct: 355 GLKARQGVRYHLQAGATVLDPDTMRSVPADGETLGEIMFRGNLCMKGYLKNPAATDEAFA 414
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV PD
Sbjct: 415 GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIELEDALYRHPAVAVAAVVALPD 474
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
P W E+PCAFV L+ GM +E +I+ +CR + Y +PK V F ELPKT+TGK+
Sbjct: 475 PKWGEVPCAFVELRE-----GMAASEAEILAHCRTLLAGYKMPKAVRF-GELPKTSTGKI 528
Query: 540 QKYVL 544
QK+ L
Sbjct: 529 QKFQL 533
>gi|358011464|ref|ZP_09143274.1| acyl-CoA synthetase [Acinetobacter sp. P8-3-8]
Length = 548
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/557 (43%), Positives = 345/557 (61%), Gaps = 21/557 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L PAN L+PL ++ERAA + +I++ +W +TY RC Q A L + GI
Sbjct: 6 DELPRTPANFVALSPLRYLERAAYIYPNQDAIVHGSRRISWRETYMRCRQFAHQLQNLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VSV+ PNIPAM E HFAVPMSGA+ N +NTRLDA+TI+ +L+H+E+K++ VD
Sbjct: 66 QKNDTVSVLLPNIPAMIEAHFAVPMSGAVLNALNTRLDAKTIAFMLEHAETKVLLVDPEF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITD--DKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
++L E V+L P+ + I D D E + + RI + YE+ + GD
Sbjct: 126 ATLAEEAVAL------VPQQIYIIDVADAEYEKNDTTA-RIGQIE----YEDWIKGGDVN 174
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W P + D + LNYT GTT PKGVV ++ ++ A +++ + + LWTLP+
Sbjct: 175 FEWHLPNDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMTPRCKYLWTLPL 234
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A G TN+CLRK D V+ LI +H + ++CGAPIVL++L ++P+ KQ
Sbjct: 235 FHCNGWCFAWTIAANGGTNICLRKVDPALVYQLIDQHKIDYLCGAPIVLSMLINTPKDKQ 294
Query: 300 L--DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
+ + V ++ AG+ PPA ++ +G V+H YG TE G + CA + W++L +E
Sbjct: 295 IKFNHHVEVMVAGAAPPAAIIEGMHHIGIQVNHVYGLTETYGPSALCASQAGWSELSIQE 354
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A L +RQGV + ++DPET V DG T GEI+ RG +M GYLK+ +AT +
Sbjct: 355 QAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGTTMGEIMFRGNIVMKGYLKNTKATEEA 414
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
K G +++GD+ + PDGY +I DRSKD+IISGGENISS E+E VLY+HP + AAVV +
Sbjct: 415 FKGGWFHSGDLAVSQPDGYAKIMDRSKDIIISGGENISSLEVEEVLYTHPAIMTAAVVAK 474
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD WQE+PCAF+ LK + TT ++I++C+ + R+ VPK VV I E+PKT+TG
Sbjct: 475 PDTRWQEVPCAFIELKQDAE-----TTADEVIEFCKQHLARFKVPKDVV-ICEIPKTSTG 528
Query: 538 KVQKYVLGDIANSMSMS 554
K+QK++L D A + S
Sbjct: 529 KLQKFILRDWAKERAES 545
>gi|149374923|ref|ZP_01892696.1| putative AMP-binding enzyme [Marinobacter algicola DG893]
gi|149360812|gb|EDM49263.1| putative AMP-binding enzyme [Marinobacter algicola DG893]
Length = 536
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/546 (42%), Positives = 330/546 (60%), Gaps = 20/546 (3%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
+L AN PLTPL ++R+A + ++I +D ++ Y RC Q+AS+LS GI
Sbjct: 6 KLNKTTANYSPLTPLTLLQRSARVYPEKLAVIDDDMNLSYRGLYARCRQMASALSRRGIE 65
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G V+++ PN M E H++VPMSG + N IN RLDA +S IL H E++++F D +
Sbjct: 66 TGDTVAILCPNSHEMLEAHYSVPMSGGVLNAINIRLDAGALSFILAHGEARVLFYD---T 122
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
+V + P LV I D K S AD YE +L +GD + W
Sbjct: 123 QWEEQVRAAVAELEVNPLLVAI-DSKAGKSQGL-------ADL--DYEALLQEGDAEAGW 172
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
+ D + LNYT GTT PKGVV ++ ++ A+ + + + + ++V LWTLPMFH
Sbjct: 173 QHAADEWDAISLNYTSGTTGNPKGVVYHHRGAYLAAMTNAMAFDMTAETVYLWTLPMFHC 232
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSS--SPEAKQL 300
NGW++TW VG T+VCLR+ D+ ++ I +GVTHMCGAP+V+NLL + L
Sbjct: 233 NGWAYTWAITAVGGTHVCLREVDSQEIYRRIEDYGVTHMCGAPVVMNLLIQDLGRASLTL 292
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
RP R G+ PP+ V+ + E +GF ++H YG TE G + C +P+W +LP +RA
Sbjct: 293 SRPARFALGGAAPPSSVIRKAEEIGFQITHLYGLTETFGPSTLCVPQPEWQQLPLEDRAK 352
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
+RQGV GL EV ++D +G +V DG GEI +RG ++M GYLK+ EAT K D
Sbjct: 353 KMSRQGVPMHGLDEVAVLDMVSGEAVPADGNVMGEICIRGNTVMKGYLKNEEATEKSFSD 412
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+ +MHPD Y+EI+DR+KDVIISGGENISS E+E VLY HP V+EAAVV D
Sbjct: 413 GWFHTGDLAVMHPDHYVEIRDRAKDVIISGGENISSLEVEEVLYRHPRVSEAAVVAMADE 472
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAF++ + T ++II +CR ++ + P+ VV + ELPKTATGK++
Sbjct: 473 KWGEVPCAFINPIDDVEE----LTHEEIIAFCREQMAHFKAPRKVV-LGELPKTATGKIR 527
Query: 541 KYVLGD 546
K +L D
Sbjct: 528 KNILRD 533
>gi|167588445|ref|ZP_02380833.1| acyl-CoA synthetase [Burkholderia ubonensis Bu]
Length = 551
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/543 (44%), Positives = 330/543 (60%), Gaps = 20/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN PLTP+ F+ R+A D +I++ D TW +TY R QLAS+L+ G+
Sbjct: 9 LERRDANYAPLTPIDFLVRSAEVYGDRVAIVHGDVRRTWGETYARAKQLASALARAGVGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM E HF VPM+GA+ NTINTRLD ++ +L+H E+K++ VD +
Sbjct: 69 GDTVAALLPNIPAMVEAHFGVPMAGAVLNTINTRLDISSVLFMLRHGEAKVLIVDTEYAE 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L P K+V + D + + P R A YE +A GD + +W
Sbjct: 129 LAHRAALDIP----GLKIVSVAD-----AMPADPARFAGAT---DYEAFVAGGDAEHAWT 176
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLP+FH N
Sbjct: 177 LPADEWDAIALNYTSGTTGDPKGVVYHHRGAYLAALSNILEWDMPKHAVYLWTLPLFHCN 236
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW F W A NVCLR+FDA TVF LIR+ VTH CGAPIV + ++++P + +D
Sbjct: 237 GWCFPWAIAARAGVNVCLRRFDAKTVFDLIRRERVTHYCGAPIVQSAIANAPAEWREGID 296
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V + AG+ P V+ + + +GF + H YG TE+ G CA + W+ + ERA L
Sbjct: 297 HTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAKQAHWDGVSDEERARL 356
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+P AT + G
Sbjct: 357 NARQGVRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKGYLKNPHATDEAFHGG 416
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ ++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV PDP
Sbjct: 417 WFHTGDLAVLSPDGYIRIKDRKKDIIISGGENISSIEVEDALYRHPAVAVAAVVAMPDPK 476
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV L+ GM TE++I+ +CR + + VPK V F ELPKT+TGK+QK
Sbjct: 477 WGEVPCAFVELRE-----GMSATEEEIVAHCRQLLAGFKVPKAVRF-GELPKTSTGKIQK 530
Query: 542 YVL 544
+ L
Sbjct: 531 FQL 533
>gi|288959450|ref|YP_003449791.1| fatty-acyl-CoA synthase [Azospirillum sp. B510]
gi|288911758|dbj|BAI73247.1| fatty-acyl-CoA synthase [Azospirillum sp. B510]
Length = 551
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 246/543 (45%), Positives = 335/543 (61%), Gaps = 20/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN LTPL F+ERAA+ D P++++ TW++T+ R +LA++L + GI
Sbjct: 20 LDRNAANFVALTPLTFLERAASVWPDRPAVVHGPVRRTWAETFGRVRRLAAALVNGGIGT 79
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+++A N P ++E HF VP++GA+ N INTRLDA I+ ILKH E+K++ VD S
Sbjct: 80 GDTVAMLAANTPELFEAHFGVPLAGAVLNAINTRLDAEAIAFILKHGEAKILIVDREFSG 139
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ + ++L P V+ DD S R YE ++ + W
Sbjct: 140 VAKKALALL----DAPIPVVDIDDPAYSGGELIGDR--------DYEAFISDVGTEHPWT 187
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + LNYT GTT PKGVV ++ ++ AV + + W + V LWTLPMFH N
Sbjct: 188 PPADEWQAIALNYTSGTTGNPKGVVYHHRGAYLNAVSNALSWNMGDAPVYLWTLPMFHCN 247
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP-EAKQ-LD 301
GW F W AV T VCLR+ V LIR+ VT+ CGAPIVLN+L+++P E KQ +
Sbjct: 248 GWCFPWTIAVTAGTAVCLRQVRPDAVLTLIREERVTNFCGAPIVLNMLNNAPAELKQGIG 307
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V+++ AG+ PPA V+ E +G+ V+H YG TE G V C W +W+ L +A++
Sbjct: 308 HKVKVMVAGAAPPAAVIAGMERMGWEVTHVYGLTECYGPTVVCVWHDRWDGLSLDGKAAI 367
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L V + DP T V +DG++ GEI+MRG ++M GYLK+P+AT + G
Sbjct: 368 KARQGVRGPMLEAVIVADPFTLEPVPKDGRSMGEIMMRGNNVMKGYLKNPKATEEAFAGG 427
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ + H DGY+EIKDRSKD+IISGGENISS E+E VLY HP V EAAVV R D
Sbjct: 428 WFHTGDLAVWHEDGYVEIKDRSKDIIISGGENISSIEVEDVLYKHPDVLEAAVVARHDEK 487
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+LK G + TE DII +CR+ + + P+TVVF LPKT+TGK+QK
Sbjct: 488 WGETPCAFVTLKDGASA-----TEADIIAFCRSHMAHFKCPRTVVF-GPLPKTSTGKIQK 541
Query: 542 YVL 544
YVL
Sbjct: 542 YVL 544
>gi|254248496|ref|ZP_04941816.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
PC184]
gi|124874997|gb|EAY64987.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
PC184]
Length = 550
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/548 (44%), Positives = 335/548 (61%), Gaps = 28/548 (5%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTP+ F+ RAA + +I++ D TW +T R QLAS+L+ G+ G V+
Sbjct: 14 ANYVPLTPIDFLIRAAEVYGERLAIVHGDVRRTWGETCTRAKQLASALAQAGVGRGDTVA 73
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----HLSSSL 124
+ PNIPAM E HF VPM+GA+ NTINTRLDA ++ +L+H E+K++ VD ++
Sbjct: 74 ALLPNIPAMVEAHFGVPMAGAVLNTINTRLDASSVLFMLRHGEAKVLIVDTEYAEIAQRA 133
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
LEV L K+V + D + + P R A YE +A GDP ++W
Sbjct: 134 ALEVPGL--------KIVSVAD-----ALPADPDRFAGAT---DYEAFVAGGDPDYAWTP 177
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
P + + + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPMFH NG
Sbjct: 178 PADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHAVYLWTLPMFHCNG 237
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDR 302
W F W A NVCLRKFDA TVF LIR+ +TH CGAPIV + ++++P + +D
Sbjct: 238 WCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERITHYCGAPIVQSAIANAPAELRAGIDH 297
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
V + AG+ P V+ + + +GF + H YG TE+ G CA + W+ + ERA L
Sbjct: 298 TVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAKQAHWDAVSDEERARLN 357
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+P+AT + G
Sbjct: 358 ARQGVRYHLEAGATVLDPDTMTPVPADGETLGEIMFRGNICMKGYLKNPKATDEAFHGGW 417
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
++TGD+ ++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV PDP W
Sbjct: 418 FHTGDLAVLMPDGYIRIKDRKKDIIISGGENISSIEVEDALYRHPAVAVAAVVAMPDPKW 477
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E+PCAFV L+ G + TE++I+ +CR + + VPK V F ELPKT+TGK+QK+
Sbjct: 478 GEVPCAFVELREGASA-----TEEEIVAHCRQLLAGFKVPKAVRF-GELPKTSTGKIQKF 531
Query: 543 VLGDIANS 550
L + S
Sbjct: 532 QLRNAVGS 539
>gi|333979082|ref|YP_004517027.1| o-succinylbenzoate--CoA ligase [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822563|gb|AEG15226.1| o-succinylbenzoate--CoA ligase [Desulfotomaculum kuznetsovii DSM
6115]
Length = 536
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/534 (43%), Positives = 322/534 (60%), Gaps = 22/534 (4%)
Query: 13 PLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAP 72
PL+PL F+ R+A D +++YND YT+S+ Y+R +LAS+L GI G V+ + P
Sbjct: 10 PLSPLSFLRRSAFVFRDKTAVVYNDKRYTYSEFYQRVNRLASALKRVGIGKGDKVAFLCP 69
Query: 73 NIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLF 132
NIP M E H+ VPM GA +IN RL R I+ I+ HS+SK +FVD+ + L+ +
Sbjct: 70 NIPPMLEAHYGVPMLGAALVSINIRLSPREIAYIINHSDSKALFVDNEFAHLITAIQEDL 129
Query: 133 PPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPM 192
P + + D + + YE LA G P + +++ +
Sbjct: 130 PNIKTFVNICDVNDSRPLDGPE--------------YEEFLADGSPDPLPNVIEDEMEVI 175
Query: 193 VLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAA 252
+NYT GTT PKGV+ ++ ++ A+ ++ + SV LWTLPMFH NGW FTWG
Sbjct: 176 AINYTSGTTGLPKGVMYHHRGAYLNALGEALEHKMSSSSVYLWTLPMFHCNGWCFTWGVT 235
Query: 253 VVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK--QLDRPVRILTAG 310
VG T+VCLRK ++ LI + GVTH+C AP VL +++ P AK Q+ + ++TAG
Sbjct: 236 AVGGTHVCLRKVVPEDIYLLIEREGVTHLCAAPTVLVSMANYPRAKEYQMKTKLNVITAG 295
Query: 311 SPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTI 370
+PP V+ E +G V+H YG TE+ G + C W+ WN+L E+A +KARQGV I
Sbjct: 296 APPSPTVIKNMEEIGAEVTHVYGLTEVYGPHTICEWQAPWNELDTSEKAKIKARQGVAYI 355
Query: 371 GLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGM 430
V +VDP V DGQT GEIVMRG ++MLGY K E T K + G +++GD+ +
Sbjct: 356 HAEFVRVVDPAEMTDVPADGQTIGEIVMRGNNVMLGYYKQLEETEKAFRGGWFHSGDLAV 415
Query: 431 MHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFV 490
MHP+GY+EIKDR KD+IISGGENIS+ E+E+ +Y HP V E AV+G PDP W E+P AFV
Sbjct: 416 MHPNGYIEIKDRLKDIIISGGENISTVEVENCIYEHPDVLEVAVIGIPDPKWGEVPKAFV 475
Query: 491 SLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
K GT+ T ++II +CR RI R+ VPK V F ELPKT+TGK+ KY L
Sbjct: 476 VPKPGTNP-----TAEEIINFCRERIARFKVPKAVEF-GELPKTSTGKIMKYRL 523
>gi|118161328|gb|ABK64012.1| putative AMP-dependent synthetase and ligase [Janthinobacterium
lividum]
Length = 578
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/543 (42%), Positives = 328/543 (60%), Gaps = 21/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN LTPL +I RAA + +I + TW TY R +LAS L G++
Sbjct: 43 LGKNSANYAALTPLDYIARAAAVYGNRLAIAHGAVRQTWGVTYARTRRLASGLIKLGVST 102
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PN PAM E F VPM+GA+ N +N RLD +++ +L+H ++K++ D +
Sbjct: 103 GDTVAVMLPNTPAMVEASFGVPMAGAVLNALNIRLDLASLTFMLRHGQAKVLLADTEFAE 162
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L ++ + + P L +I + + P + +D YE++LA GDP + W
Sbjct: 163 LARQMAA------QIPGLRVIQVNDVLG------PEVDAFSDLD-YESLLASGDPDYDWQ 209
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ + A+ ++++W +PK +V LWTLPMFH N
Sbjct: 210 PPADEWDAIALNYTSGTTGDPKGVVYHHRGAALNALSNILEWDMPKHAVYLWTLPMFHCN 269
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W A NVCLRKF+ VF L+R+ +TH C APIV L+++P + +D
Sbjct: 270 GWCFPWTIAARAGVNVCLRKFEPKLVFDLMRELRITHYCAAPIVHAALANAPANWRDGID 329
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
VR + AG+PPPA ++ + E++GF + H YG TE+ G CA + +W L ERA L
Sbjct: 330 WTVRGMVAGAPPPAAMVAKIEAMGFDLIHSYGLTEVYGPAAICAEQDEWAALSQEERAVL 389
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR + V ++DPET V DG+ GEI+ RG M GYLK+ AT + G
Sbjct: 390 KSRQGVRYHLQSAVAVIDPETMQPVAADGEQIGEIMFRGNICMKGYLKNERATQEAFAGG 449
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G+M+PDGY+++KDRSKD+IISGGENISS E+E LY HP V AAV+ +PD
Sbjct: 450 WFHTGDLGVMYPDGYIKLKDRSKDIIISGGENISSVEVEDALYHHPQVLAAAVIAQPDEK 509
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV L+ G TE ++I +C+ + + VPK + F LP+T+TGK+QK
Sbjct: 510 WGETPCAFVELREGG-----TVTEAELIAFCKNNLAGFKVPKAIYF-GPLPRTSTGKIQK 563
Query: 542 YVL 544
+ L
Sbjct: 564 FEL 566
>gi|99081011|ref|YP_613165.1| acyl-CoA synthetase [Ruegeria sp. TM1040]
gi|99037291|gb|ABF63903.1| AMP-dependent synthetase and ligase [Ruegeria sp. TM1040]
Length = 543
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/551 (42%), Positives = 341/551 (61%), Gaps = 21/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PLTPL F+ERAAT + +II+ +++ Y R QL S+LS GI
Sbjct: 10 LDRTPANYQPLTPLMFLERAATVFPEHTAIIHGPLRRSYAAFYARARQLGSALSHRGITR 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS + PN AM E H+ VPM GA+ ++INTRLDA I+ L H+ SK+V VD
Sbjct: 70 GDTVSALLPNTSAMLECHYGVPMCGAVLHSINTRLDAAIIAFQLDHAMSKVVIVDSEFMP 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L+ E ++L S P L+ E+ RI + VD Y++ +A GD +F+W+
Sbjct: 130 LMQEALALC---SVQPLLI------EVDDPVYEGARIK-TEAVD-YDSFIADGDAEFAWL 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + D + +NYT GTT PKGVV ++ +++A + + + K +V LWTLPMFH N
Sbjct: 179 MPEDEWDAISINYTSGTTGDPKGVVSHHRGAYLLAQGNALTTTMGKHAVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W + + T+VCLR+ A ++ + GVTH+CGAPIV++L+ S+P Q LD
Sbjct: 239 GWCFPWTLSAIIGTHVCLRQVRADQIWNALADEGVTHLCGAPIVMSLMISAPADVQRPLD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+ V+ TA +PPP +L ++ GF V+H YG TE G V W W++LP E++ L
Sbjct: 299 QTVQFFTAAAPPPEKLLADMKTAGFEVTHLYGLTETYGPAVVNDWHQSWSELPHDEQSRL 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR + L ++++DPET V DG+T GE++ RG +M GY ++P+AT K + G
Sbjct: 359 KSRQGVRYLPLEGLNVLDPETLEPVPHDGETMGEVMFRGNVVMKGYFRNPDATRKAFEGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G++HPDGY+++KDRSKDVIISGGENISS E+E LY HP + AVV PD
Sbjct: 419 WFHSGDLGVVHPDGYIQLKDRSKDVIISGGENISSIEVEEALYRHPAIAVTAVVAMPDEK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDII-QYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E PCAF+ L G + + D + Q+CR ++ Y VP+ V + E+P+T+TGK+Q
Sbjct: 479 WGETPCAFIELAEGAE------IDTDALRQWCRDQLAPYKVPRKFV-LTEIPRTSTGKIQ 531
Query: 541 KYVLGDIANSM 551
K+ L + A S+
Sbjct: 532 KFALREQAKSL 542
>gi|399992396|ref|YP_006572636.1| acyl-CoA synthetase [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398656951|gb|AFO90917.1| acyl-CoA synthetase [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
Length = 542
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/551 (41%), Positives = 328/551 (59%), Gaps = 21/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN PLTPL + RAA D P+++Y + T++ Y RC +LAS+L+ G+ P
Sbjct: 10 LEKTAANYVPLTPLSHLRRAAHVFADVPAVVYGNHRKTYAAYYDRCTRLASALAGMGVRP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+ + PN+PA E HF VP GA+ NTINTRLD T++ I H E+K+V VD S
Sbjct: 70 GEVVATLIPNLPAQAEAHFGVPACGAVLNTINTRLDVSTVAYIFDHGEAKVVLVD--SQF 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L L + P ++ + DD+ +S P YE++LA F W+
Sbjct: 128 LTLAEEAKAACDGLGPLIIEVPDDQASYPASGRHP---------IYEDILAAAAHDFDWI 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + + LNYT GTT PKGVV ++ +++ + ++I W + Q L +P+FH N
Sbjct: 179 MPQDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVISWRMVMQPKYLAIVPLFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW+ TW V+G T +C R AP ++ I G TH GAPIVLN+L ++ E +Q D
Sbjct: 239 GWNHTWMMPVLGGTLICCRDITAPAIYGAIADEGATHFGGAPIVLNMLVNAAEEDRRQFD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWK-PKWNKLPARERAS 360
V + TAG+PP L + E+LGF V+ YG TE G C WK W+ L + RA+
Sbjct: 299 HTVEVFTAGAPPAPATLEKIEALGFHVTQVYGLTETYGHVTECLWKGDSWDTLDQQGRAA 358
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
+KARQGV + + ++ + + +GQ +GEIVMRG S+M GYLK+P+AT++ +
Sbjct: 359 IKARQGVAFPMMDHITVMRDDM-QQIAMNGQDQGEIVMRGNSVMKGYLKNPDATAEAFQG 417
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +++GD+ + HPDGY++I DR+KD+IISGGENISS E+E VL HP VN AAVV +PD
Sbjct: 418 GYFHSGDIAVQHPDGYIQIADRAKDIIISGGENISSVEVEGVLMGHPDVNLAAVVAKPDD 477
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV LK G D+I++ R + + PK VVF ELPKT+TGK+Q
Sbjct: 478 KWGEVPCAFVELKPGA-----TVDPADLIRFARETLAGFKAPKQVVF-QELPKTSTGKIQ 531
Query: 541 KYVLGDIANSM 551
K+ L A ++
Sbjct: 532 KFELRQQAKAL 542
>gi|90416743|ref|ZP_01224673.1| acyl-CoA synthase [gamma proteobacterium HTCC2207]
gi|90331496|gb|EAS46732.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2207]
Length = 545
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/556 (43%), Positives = 335/556 (60%), Gaps = 24/556 (4%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L N AN PLTPL +ERAAT D +II+ D T+ Q Y RC +LAS+L+ GI
Sbjct: 8 HLDKNQANYQPLTPLTLLERAATVFPDHIAIIHGDMQITYGQFYSRCRRLASALTDQGIG 67
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G VSV+ N PAM E+H+AVPM GA+ + INTRLDA I+ L H ESK++ D S
Sbjct: 68 SGDTVSVMLANTPAMLEVHYAVPMCGAVLHAINTRLDASVIAFQLDHGESKVLITDLAFS 127
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFV--DTYENMLAKGDPQF 180
+ + L + P ++ D P P + D YE MLA GDP F
Sbjct: 128 QTVKFALKLI---AVKPLVIDYLD-----------PVFPQQGQLLGDDYEAMLASGDPDF 173
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
W+ P + D + LNYT GTT PKGVV ++ ++A ++I +PK +V LWTLPMF
Sbjct: 174 DWLMPDDEWDAIALNYTSGTTGDPKGVVYHHRGASLLAQGNVITASIPKHAVYLWTLPMF 233
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAKQ 299
H NGW F W + V T+VCLR+ A ++A + +H VTH+CGAP+V++ +L E +Q
Sbjct: 234 HCNGWCFPWTMSAVTGTHVCLREVRADAIWAAMIEHKVTHLCGAPVVMSTILGVEKEHRQ 293
Query: 300 -LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
L + V TA + PP VL GF V+H YG TE+ G V W +W LPA ++
Sbjct: 294 ALSQVVDFFTAAAAPPEGVLAEMREAGFNVTHLYGLTEVYGPAVVNDWNQQWEALPASQQ 353
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A +KARQGVR L +D+VDP+T V RDG+T GE++ RG +M GYLK+ +AT +
Sbjct: 354 ARVKARQGVRYHALEGLDVVDPQTMKPVPRDGETLGEVMFRGNVVMKGYLKNQQATDEAF 413
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
K G +++GD+G++HPD Y+++KDRSKD+IISGGENISS EIE VL+ H V+ AAVV P
Sbjct: 414 KGGWFHSGDLGVVHPDNYIQLKDRSKDIIISGGENISSIEIEEVLHKHAAVSFAAVVAMP 473
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
D W E PCAF+ + G + +D+ ++CR + + VP+ VF + + KT+TGK
Sbjct: 474 DKKWGETPCAFIEVIEGA-----QLSSEDLDRWCRQHMAGFKVPRHYVF-EPILKTSTGK 527
Query: 539 VQKYVLGDIANSMSMS 554
VQK+ L A M++
Sbjct: 528 VQKFALRQRAAKMAIQ 543
>gi|163758844|ref|ZP_02165931.1| acyl-CoA synthase [Hoeflea phototrophica DFL-43]
gi|162284134|gb|EDQ34418.1| acyl-CoA synthase [Hoeflea phototrophica DFL-43]
Length = 556
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/552 (43%), Positives = 340/552 (61%), Gaps = 18/552 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L + AN PLTPL +ERAA D +II+ +++ R +LA++L S GI
Sbjct: 16 LNRHAANYQPLTPLVHLERAALIHPDHIAIIHGSQRTSYAMFLERSKRLANALGSVGIGK 75
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VSV+ N PAM E H VPM+GA+ ++INTRLDA+ I+ L H+E+K++ VD S+
Sbjct: 76 GDTVSVMLSNTPAMLEAHHGVPMTGAVLHSINTRLDAQAIAFQLDHAETKVLIVDREFSA 135
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSS--SPPPRIPPADFVDTYENMLAKGDPQFS 181
++ E ++L + LV+ DD E + + RI D Y+ ++ G P F
Sbjct: 136 VMAEALAL----AAAKPLVIDYDDTEYPDDAPFAKGERIGTHD----YDTFVSAGAPDFI 187
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
P + D + LNYT GTT PKGVV ++ ++ ++I + + V LWTLPMFH
Sbjct: 188 RSAPDDEWDSVSLNYTSGTTGNPKGVVYHHRGAALMGYSNVIASGMGRHPVYLWTLPMFH 247
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD 301
NGW F W VV T+VCLR A ++ I HGVTH+CGAPIV++ L ++PE ++ D
Sbjct: 248 CNGWCFPWTLGVVAGTHVCLRWVRAKAMYDAIADHGVTHLCGAPIVMSTLLNAPETEKRD 307
Query: 302 --RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+ V TA +PPP VL GF V H YG TE G V WK +W+KL ER
Sbjct: 308 FSQTVSFNTAAAPPPEAVLAGMADAGFEVVHLYGLTETYGPAVVNEWKSEWSKLDRSERT 367
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+ KARQGVR L ++ ++DPET + DG+T GE++ RG +M GYLK+PEA+++ +
Sbjct: 368 ARKARQGVRYPALEDLAVLDPETMENTPADGETIGEVMFRGNIVMKGYLKNPEASAEAFR 427
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+G+MHPDGYL++KDRSKD+IISGGENISS E+E LY HP + AAVV RPD
Sbjct: 428 GGWFHSGDLGVMHPDGYLQLKDRSKDIIISGGENISSIEVEDALYKHPAIMAAAVVARPD 487
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E PCAFV L+ G +E ++I++CR + R+ P++VVF E+PKT+TGK+
Sbjct: 488 DKWGETPCAFVELRP-----GQTLSEAEVIEHCRGLLARFKCPRSVVF-REVPKTSTGKI 541
Query: 540 QKYVLGDIANSM 551
QK++L + A S+
Sbjct: 542 QKFLLREEARSL 553
>gi|402848933|ref|ZP_10897179.1| putative AMP-binding protein [Rhodovulum sp. PH10]
gi|402500809|gb|EJW12475.1| putative AMP-binding protein [Rhodovulum sp. PH10]
Length = 546
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/556 (43%), Positives = 341/556 (61%), Gaps = 25/556 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PLTPL F+ERAA D +I++ T+ + R +LAS+L+ GI
Sbjct: 10 LDKNPANHRPLTPLVFLERAARVFPDRVAIVHGPLRRTYRDFHARAKKLASALAKRGIGR 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ N PAM E H+ VPM+GA+ NT+NTRLDA I+ L H E+K+V D +
Sbjct: 70 GDTVAVMLANTPAMLECHYGVPMAGAVLNTLNTRLDAAIIAFSLDHGEAKVVITDREFAK 129
Query: 124 LL---LEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
++ L+ ++ P LV+ DD E S R+ D YE LA+GD F
Sbjct: 130 VMGPALDKAAVKP-------LVIDYDDPEFSGEGE---RLGDLD----YEAFLAEGDESF 175
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+ + D + LNYT GTT PKGVV ++ ++ A+ ++++ + K V LWTLPMF
Sbjct: 176 ARRLEIDEWDAISLNYTSGTTGNPKGVVYHHRGAWLTAMSNVVNCAMGKHPVYLWTLPMF 235
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVL-NLLSSSP-EAK 298
H NGW F W ++V T+VCLR+ A T++ L+ HGVTH+CGAPIV+ LL+++P + K
Sbjct: 236 HCNGWCFPWSISIVAGTHVCLRQVRAKTMYELMAAHGVTHLCGAPIVMATLLNAAPADRK 295
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
LD V+ TA +PPP VL+ + GF V+H YG TE G + W +W+ L A E+
Sbjct: 296 PLDGVVQFFTAAAPPPESVLVAMKEAGFEVTHLYGLTETYGPSAINDWHREWDDLSAAEQ 355
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
+KARQGV L ++ + D T V DGQT GE++ RG +M GYLK+ +AT
Sbjct: 356 GIMKARQGVPYTCLDDLAVKDAATMEDVPADGQTLGEVMFRGNVVMRGYLKNKKATDDAF 415
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
G +++GD+G+MHPDGY+++KDR+KD+IISGGENISS E+E LY HP V AVV +P
Sbjct: 416 AGGWFHSGDLGVMHPDGYIQLKDRAKDIIISGGENISSIEVEDALYKHPAVQAVAVVAKP 475
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
D W E PCAFV L+ G + +E+D++ +CR + R+ P+ V+F E+PKT+TGK
Sbjct: 476 DEKWGETPCAFVELREGQQA-----SEEDLLDWCREHLARFKCPRQVIFT-EIPKTSTGK 529
Query: 539 VQKYVLGDIANSMSMS 554
+QKY L ++A M+ +
Sbjct: 530 IQKYKLREMAKEMAAA 545
>gi|73538138|ref|YP_298505.1| acyl-CoA synthetase [Ralstonia eutropha JMP134]
gi|72121475|gb|AAZ63661.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
Length = 544
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/548 (43%), Positives = 330/548 (60%), Gaps = 31/548 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN P+TP+ F+ RAA D P+I++ W TY R +LAS+L+ G+
Sbjct: 9 LGRNAANFVPITPIDFLVRAAEVYGDRPAIVHGPVRQNWRDTYVRARRLASALARAGVGK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----H 119
G V+ + PN PAM E HF VPM+GA+ N +N RLDA + +L+H E++++ D
Sbjct: 69 GDTVAALLPNTPAMVEAHFGVPMAGAVLNALNIRLDAANLVFMLRHGEARVLLADTEFAD 128
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT-YENMLAKGDP 178
L+ + LE+ P L +I + + + F DT YE+ LA GDP
Sbjct: 129 LARQMALEI----------PGLKVIAVEDALGPQAE--------RFGDTDYESFLASGDP 170
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
+++W P + D + LNYT GTT PKGVV ++ + A+ ++++W +PK V LWTLP
Sbjct: 171 EYAWKMPDDEWDAIALNYTSGTTGDPKGVVYHHRGAAMNAISNILEWDLPKHPVYLWTLP 230
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA- 297
+FH NGW F W A NVCLRKF+ VF L+R GVTH C APIV L ++P +
Sbjct: 231 LFHCNGWCFPWTIAARAGVNVCLRKFEPRLVFDLMRDEGVTHYCAAPIVHTALVNAPPSW 290
Query: 298 -KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
+ L PVR + AG+PPPA VL + E++GF ++H YG TE+ G CA + W+ L
Sbjct: 291 REGLRGPVRGMVAGAPPPAAVLAQMEAMGFELTHVYGLTEVYGPAAVCAEQDGWDSLSQE 350
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
ERA KARQGVR + V ++DP++ V DG+T GEI+ RG M GYLK+ +AT +
Sbjct: 351 ERAVKKARQGVRYHLQSGVAVLDPDSMQPVPADGETIGEIMFRGNICMKGYLKNEKATRE 410
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
G ++TGD+G+ DGY++IKDRSKD+IISGGENISS E+E LY HP V AAVV
Sbjct: 411 AFAGGWFHTGDLGVCMADGYIKIKDRSKDIIISGGENISSVEVEDALYRHPAVLAAAVVA 470
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
+PD W E PCAFV LK G + T ++++ +CR + + VPK V F LPKT+T
Sbjct: 471 QPDAKWGETPCAFVELKDGASA-----TAEELMAHCRTLLAGFKVPKAVYF-GPLPKTST 524
Query: 537 GKVQKYVL 544
GK+QK+ L
Sbjct: 525 GKIQKFEL 532
>gi|297182053|gb|ADI18227.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [uncultured
gamma proteobacterium HF0200_40H22]
Length = 539
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/552 (42%), Positives = 333/552 (60%), Gaps = 20/552 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
++L+ +PAN PLTP+ F+ RAA +II+ Y+++Q R +LA+SL++ GI
Sbjct: 6 EQLQKDPANFEPLTPVSFLRRAAQVAPSRTAIIHGQRRYSYAQFLERSSRLANSLAARGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
PG V+++ N P M E H VPM GA+ N++N RLDA+TI+ IL H E+K + D L
Sbjct: 66 GPGDCVAIMGANTPEMLEAHNGVPMLGAVLNSLNIRLDAKTIAFILDHGEAKALLTDRLF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
S ++ E ++L K LV+ DD E + D YE+ +A G F
Sbjct: 126 SEVIKEALALI----KREMLVIDIDDSESEGGEC----LGEMD----YESFIAGGGDTFV 173
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
+P+ + + L YT GTT PKG V ++ ++ A+ ++ + + SV LWTLPMFH
Sbjct: 174 AGQPEDEWQALSLLYTSGTTGNPKGCVYHHRGAYLNALGNMSTMELNRNSVYLWTLPMFH 233
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
+GW+FTW T+VCLR + VF I +GVTHMCGAPIV+N+L+++P+ +
Sbjct: 234 CDGWTFTWAVTAAMGTHVCLRAVEPGAVFTSIAANGVTHMCGAPIVMNMLANAPQELKTP 293
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+ V I T G+ PP+ V+ E+ GF V+H YG TE G C + W L +ER+
Sbjct: 294 FSQTVEIATGGAAPPSAVIEAMEANGFHVTHLYGLTETYGPATVCIPQEDWPALALQERS 353
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
S ARQGV L + DP+T V DG+T GE+++RG ++M GYLK+ EAT
Sbjct: 354 SRIARQGVHYGTLENASVKDPDTMEDVPWDGETFGEVMIRGNTVMKGYLKNEEATQAAFA 413
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+G+ H DGY+EIKDRSKD+IISGGENISS E+E LY HP V EAAVV R D
Sbjct: 414 GGWFHSGDIGVRHADGYIEIKDRSKDIIISGGENISSLEVEETLYRHPKVLEAAVVARTD 473
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E PCAFV+L G ++ ++I+ +CR + + P+TVVF ELPKT+TGK+
Sbjct: 474 ETWGESPCAFVTLHPGEEA-----EPQEIVDFCRENMAHFKAPRTVVF-GELPKTSTGKI 527
Query: 540 QKYVLGDIANSM 551
QK+VL + AN +
Sbjct: 528 QKFVLREKANDL 539
>gi|26989514|ref|NP_744939.1| acyl-CoA synthetase [Pseudomonas putida KT2440]
gi|24984387|gb|AAN68403.1|AE016473_1 AMP-binding domain protein [Pseudomonas putida KT2440]
Length = 548
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/550 (42%), Positives = 330/550 (60%), Gaps = 18/550 (3%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L PN AN PL+PL F++RAA ++IY Y++ Q + R LAS+L G+
Sbjct: 9 ELAPNEANHVPLSPLSFLKRAAQVYPQRDAVIYGARRYSYRQLHERSRALASALERVGVQ 68
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
PG V+++APNIP M E H+ VP +GA+ IN RL+ R+I+ IL+H +K++ D
Sbjct: 69 PGERVAILAPNIPEMLEAHYGVPGAGAVLVCINIRLEGRSIAFILRHCAAKVLICDREFG 128
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ + +++ P LV I DD+ R A +D YE LA+GDP
Sbjct: 129 AVANQALAML---DAPPLLVGIDDDQA--------ERADLAHDLD-YEAFLAQGDPARPL 176
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P+++ + +NYT GTT PKGVV ++ ++ A + + + +SV LWTLPMFH
Sbjct: 177 SAPQNEWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGALIFQLGPRSVYLWTLPMFHC 236
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
NGWS TW + G T+VCLRK + A I +H VTH+ AP+V+++L + A
Sbjct: 237 NGWSHTWAVTLSGGTHVCLRKVQPDAINAAIAEHAVTHLSAAPVVMSMLIHAEHASAPPV 296
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
PV ++T G+ PP+ V+ E+ GF ++H YG TE G + C W+P ++LP RA
Sbjct: 297 PVSVITGGAAPPSAVIAAMEARGFNITHAYGMTESYGPSTLCLWQPGVDELPLEARAQFM 356
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
+RQGV L E ++D +TG V DG T GE+V+RG ++M GYL +PEAT + +G
Sbjct: 357 SRQGVAHPLLEEATVLDTDTGRPVPADGLTLGELVVRGNTVMKGYLHNPEATRAALANGW 416
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
+TGD+ ++H DGY+EIKDR+KD+IISGGENISS EIE VLY HP V EAAVV RPD W
Sbjct: 417 LHTGDLAVLHLDGYVEIKDRAKDIIISGGENISSLEIEEVLYQHPEVVEAAVVARPDSRW 476
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E P AFV+L+ + G D++++CR R+ + P+ V +D LPKTATGK+QK+
Sbjct: 477 GETPHAFVTLRADALASG-----DDLVRWCRERLAHFKAPRHVSLVD-LPKTATGKIQKF 530
Query: 543 VLGDIANSMS 552
VL + A
Sbjct: 531 VLREWARQQE 540
>gi|46202504|ref|ZP_00053109.2| COG0318: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
[Magnetospirillum magnetotacticum MS-1]
Length = 486
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/503 (46%), Positives = 316/503 (62%), Gaps = 20/503 (3%)
Query: 52 LASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSE 111
+ S+L++ G+ G V+V+A N PA YE F VPM+G + +N RLDA I+ +L H E
Sbjct: 1 MGSALAARGVGVGDTVAVMAANTPAAYEAAFGVPMTGGVLCALNIRLDAEAIAFMLSHGE 60
Query: 112 SKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYEN 171
+K++ D + + + +SL K P LV+ DD +++ YE
Sbjct: 61 AKVLLTDREFAPTIKKALSLL---DKKP-LVIDIDDAAVTTGEMLGEM--------EYEA 108
Query: 172 MLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQS 231
+A GDP ++WV P + D + LNYT GTT PKGVV ++ +I A+ ++++W +
Sbjct: 109 FIAGGDPDYAWVWPADEWDAIALNYTSGTTGNPKGVVYHHRGAYINALGNVVNWGMTGHP 168
Query: 232 VLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL 291
V LWTLPMFH NGW F W A + TNVCLR+ D +FA I KH VTHMCGAPIV+ +L
Sbjct: 169 VYLWTLPMFHCNGWCFPWTLAALAGTNVCLRRVDGGHMFAAIEKHKVTHMCGAPIVMGML 228
Query: 292 SSSPEAKQ--LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPK 349
++PE + L PV +TA +PPPA V+ R ES GF ++H YG TE+ G CAW +
Sbjct: 229 INAPEKDRRPLPHPVEFMTAAAPPPAAVIERLESQGFKITHVYGLTEVYGPATVCAWHEE 288
Query: 350 WNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLK 409
W+ LP ERA LK+RQGVR + + + DP T + V +DG T GE+ RG +M GYLK
Sbjct: 289 WDALPTEERARLKSRQGVRYVNEEAMMVADPLTLVPVPKDGVTMGEVFYRGNVVMKGYLK 348
Query: 410 DPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMV 469
+P AT + G ++TGD+G+ H D Y+E+KDRSKD+IISGGENIS+ E+E VLY HP V
Sbjct: 349 NPAATDEAFSGGWFHTGDLGVWHGDDYIELKDRSKDIIISGGENISTIEVEGVLYQHPAV 408
Query: 470 NEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFID 529
EAAVV RPD W E PCAF+ LK GG T E +I+ +CR R+ Y P+TVVF
Sbjct: 409 GEAAVVARPDEKWGETPCAFIGLK----EGGAATAE-EIMAFCRQRLAHYKCPRTVVFTS 463
Query: 530 ELPKTATGKVQKYVLGDIANSMS 552
LPKT+TGKVQKYVL ++A ++
Sbjct: 464 -LPKTSTGKVQKYVLREMAKKLN 485
>gi|395762003|ref|ZP_10442672.1| acyl-CoA synthetase [Janthinobacterium lividum PAMC 25724]
Length = 544
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/543 (41%), Positives = 330/543 (60%), Gaps = 21/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN LTPL +I RAA + +I + TWS TY R +LAS+L++ G++
Sbjct: 9 LGKNSANYAALTPLDYIARAAAVYGNRLAIAHGAVRQTWSVTYARTRRLASALATLGVDT 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PN PAM E F VPM+GA+ N +N RLD ++ +L+H ++K++ D +
Sbjct: 69 GDTVAVMLPNTPAMVEASFGVPMAGAVLNALNIRLDLASLIFMLRHGQAKVLLADTEFAE 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L ++ + + P L +I + + P + +D YE++LA GDP + W
Sbjct: 129 LARQMAA------QIPGLRVIQVNDVLG------PEVAAFSDLD-YESLLASGDPDYDWP 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
RP + D + LNYT GTT PKGVV ++ + A+ ++++W +PK +V LWTLPMFH N
Sbjct: 176 RPADEWDAIALNYTSGTTGDPKGVVYHHRGAALNALSNILEWDMPKHAVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W A NVCLRKF+ VF L+R+ +TH C APIV L+++P + +D
Sbjct: 236 GWCFPWTIAARAGVNVCLRKFEPKLVFDLMRELRITHYCAAPIVHAALANAPANWRAGID 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
VR + AG+PPPA +L + +++GF + H YG TE+ G CA + W L ERA
Sbjct: 296 WTVRGMVAGAPPPAAMLAKIDAMGFDLIHSYGLTEVYGPAAICAEQDAWAALSQEERAVF 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGVR + V ++DPET V DG+ GEI+ RG M GYLK+ +AT + G
Sbjct: 356 KSRQGVRYHLQSAVAVLDPETMQPVAADGEQIGEIMFRGNICMKGYLKNEKATQEAFAGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G+M+ DGY+++KDRSKD+IISGGENISS E+E LY HP V AAV+ +PD
Sbjct: 416 WFHTGDLGVMYADGYIKLKDRSKDIIISGGENISSVEVEDALYHHPQVLAAAVIAQPDEK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV L+ G T ++++ +C+ + + VPK + F LP+T+TGK+QK
Sbjct: 476 WGETPCAFVELREGAS-----VTAEELMAFCKNNLAGFKVPKAIYF-GPLPRTSTGKIQK 529
Query: 542 YVL 544
+ L
Sbjct: 530 FEL 532
>gi|107026422|ref|YP_623933.1| acyl-CoA synthetase [Burkholderia cenocepacia AU 1054]
gi|116692390|ref|YP_837923.1| acyl-CoA synthetase [Burkholderia cenocepacia HI2424]
gi|170735608|ref|YP_001776868.1| acyl-CoA synthetase [Burkholderia cenocepacia MC0-3]
gi|105895796|gb|ABF78960.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia AU
1054]
gi|116650390|gb|ABK11030.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
HI2424]
gi|169817796|gb|ACA92378.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
MC0-3]
Length = 550
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/542 (44%), Positives = 333/542 (61%), Gaps = 28/542 (5%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTP+ F+ RAA + +I++ D TW +T R QLAS+L+ G+ G V+
Sbjct: 14 ANYVPLTPIDFLIRAAEVYGERLAIVHGDVRRTWGETCTRAKQLASALAQAGVGRGDTVA 73
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----HLSSSL 124
+ PNIPAM E HF VPM+GA+ NTINTRLDA ++ +L+H E+K++ VD ++
Sbjct: 74 ALLPNIPAMVEAHFGVPMAGAVLNTINTRLDASSVLFMLRHGEAKVLIVDTEYAEVAQRA 133
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
LE+ L K+V + D + + P R A YE +A GDP ++W
Sbjct: 134 ALELPGL--------KIVSVAD-----ALPADPDRFAGAT---DYEAFVAGGDPDYAWTP 177
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
P + + + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPMFH NG
Sbjct: 178 PADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHAVYLWTLPMFHCNG 237
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDR 302
W F W A NVCLRKFDA TVF LIR+ +TH CGAPIV + ++++P + +D
Sbjct: 238 WCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERITHYCGAPIVQSAIANAPAELRAGIDH 297
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
V + AG+ P V+ + + +GF + H YG TE+ G CA + W+ + ERA L
Sbjct: 298 TVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAKQAHWDAVSDEERARLN 357
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+P+AT + G
Sbjct: 358 ARQGVRYHLEAGATVLDPDTMTPVPADGETLGEIMFRGNICMKGYLKNPKATDEAFHGGW 417
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
++TGD+ ++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV PDP W
Sbjct: 418 FHTGDLAVLMPDGYIRIKDRKKDIIISGGENISSIEVEDALYRHPAVAVAAVVAMPDPKW 477
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E+PCAFV L+ G + TE++I+ +CR + + VPK V F ELPKT+TGK+QK+
Sbjct: 478 GEVPCAFVELREGASA-----TEEEIVAHCRQLLAGFKVPKAVRF-GELPKTSTGKIQKF 531
Query: 543 VL 544
L
Sbjct: 532 QL 533
>gi|295700840|ref|YP_003608733.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1002]
gi|295440053|gb|ADG19222.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1002]
Length = 544
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/545 (43%), Positives = 324/545 (59%), Gaps = 24/545 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ F+ RAA + +I++ DT W +TY R +LAS+L GI
Sbjct: 10 LGRREANYVPLTPIDFLLRAAQVYGERLAIVHGDTRRNWRETYERARRLASALHEAGIGR 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIP M E HF VPM+GA+ NT+NTRLD T+ +L+H E+K + VD
Sbjct: 70 GDTVAALLPNIPPMVEAHFGVPMAGAVLNTLNTRLDVATLLFMLRHGEAKALIVDTEYGE 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQFS 181
FP + + IS + + P + A F+ YE L GDP +
Sbjct: 130 FAHRAALEFP------------ELRVISVADAQP--VDAAQFLRATDYEQFLQTGDPSYE 175
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + D + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPMFH
Sbjct: 176 WTPPADEWDAIALNYTSGTTGDPKGVVYHHRGAYLNALSNILEWDMPKHAVYLWTLPMFH 235
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQ 299
NGW F W A NVCLRKFDA TVF LIR+ +TH CGAPIV + L+++P +
Sbjct: 236 CNGWCFPWTVAARAGVNVCLRKFDAKTVFELIRREHITHYCGAPIVQSSLANAPAEWREG 295
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+ V + AG+ PP V+ + + +GF ++H YG TE G CA + +W+ L + A
Sbjct: 296 ITHRVSTMVAGAAPPPAVIAKMKQIGFDLTHVYGLTETYGPAAVCAKQQEWDALDEQISA 355
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L ARQGVR V ++D +T V DG+T GEI+ RG M GYLK+ AT K
Sbjct: 356 DLTARQGVRYHLQAAVTVLDADTLAPVPDDGETIGEIMFRGNICMKGYLKNERATEAVFK 415
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+G+ DGY+ I+DRSKD+IISGGENISS E+E LY HP V+ AAVV D
Sbjct: 416 GGWFHTGDLGVRTADGYIRIRDRSKDIIISGGENISSIEVEDTLYRHPAVSVAAVVAMAD 475
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
P W E+PCAF+ LK G + TE++II +CR + + +PK V F ELPKT+TGK+
Sbjct: 476 PKWGEVPCAFIELKEGAQA-----TEEEIIAHCRLFLAGFKLPKAVRF-GELPKTSTGKI 529
Query: 540 QKYVL 544
QK+ L
Sbjct: 530 QKFEL 534
>gi|339322411|ref|YP_004681305.1| acyl-CoA synthetase [Cupriavidus necator N-1]
gi|338169019|gb|AEI80073.1| acyl-CoA synthetase [Cupriavidus necator N-1]
Length = 544
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/548 (44%), Positives = 329/548 (60%), Gaps = 31/548 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PLTP+ F+ RAA + +I++ W TY R +LAS+L+ GI
Sbjct: 9 LARNAANFVPLTPIDFLVRAAEVYGERLAIVHGPLRQNWRDTYVRARRLASALARAGIGK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----H 119
G V+ + PN PAM E HF VPM+GA+ N +N RLDA + +L+H E++++ D
Sbjct: 69 GDTVAALLPNTPAMVEAHFGVPMAGAVLNALNIRLDAANLVFMLRHGEARVLLADTEFAD 128
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT-YENMLAKGDP 178
L+ + LE+ P L +I + +P F DT YE LA GDP
Sbjct: 129 LARQMALEI----------PGLKVIAVHDVLGPQEAP--------FGDTDYEAFLASGDP 170
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
++W P + + + LNYT GTT PKGVV ++ I AV ++++W +PK V LWTLP
Sbjct: 171 DYAWHMPADEWEAIALNYTSGTTGDPKGVVYHHRGAAINAVSNILEWDLPKHPVYLWTLP 230
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA- 297
MFH NGW F W A NVCLRKF+ VF L+R GVTH C APIV L ++P A
Sbjct: 231 MFHCNGWCFPWTVAARAGVNVCLRKFEPRLVFDLMRAEGVTHYCAAPIVHTALVNAPAAW 290
Query: 298 -KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
+ + PVR + AG+PPPA VL + E++GF ++H YG TE+ G CA + W+ L +
Sbjct: 291 REGVRGPVRGMVAGAPPPAAVLAQMEAMGFELTHVYGLTEVYGPAAVCAEQDDWSTLSEQ 350
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
+RA KARQGVR ++V ++DP++ V DG+T GEI+ RG M GYLK+ +AT +
Sbjct: 351 DRAVKKARQGVRYHLQSQVAVLDPDSMQPVPADGETIGEIMFRGNICMKGYLKNEKATRE 410
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
G ++TGD+G+ PDGY++IKDRSKD+IISGGENISS E+E LY HP V AAVV
Sbjct: 411 AFAGGWFHTGDLGVCMPDGYIKIKDRSKDIIISGGENISSVEVEDALYRHPAVLAAAVVA 470
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
+PD W E PCAFV LK G + +++I +CR + + VPK V F LPKT+T
Sbjct: 471 QPDVKWGETPCAFVELKDGAS-----VSAEELIAHCRTLLAGFKVPKAVYF-GPLPKTST 524
Query: 537 GKVQKYVL 544
GK+QK+ L
Sbjct: 525 GKIQKFEL 532
>gi|110634877|ref|YP_675085.1| acyl-CoA synthetase [Chelativorans sp. BNC1]
gi|110285861|gb|ABG63920.1| AMP-dependent synthetase and ligase [Chelativorans sp. BNC1]
Length = 558
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/556 (43%), Positives = 339/556 (60%), Gaps = 19/556 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L AN P+TP+ F+ERAA D P++I+ T T+ + + C +LAS+L GI
Sbjct: 6 DGLPRCAANYQPMTPISFLERAALTYPDHPAVIHGSTRITYREFWENCRRLASALVRLGI 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMS-GAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
G VSV+ N P M E H+ VPM+ GA+ +++N RLDA+ I+ L+HSESK++ VD
Sbjct: 66 RRGDTVSVLLSNTPPMIEAHYGVPMANGAVLHSLNYRLDAQAIAFQLEHSESKVLIVDRE 125
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDP 178
SSL + ++L +P ++I D +P P+ P F+ + Y L G+P
Sbjct: 126 FSSLASDALALL---KNSP--IVIDYDDPEYPDDAPYPKGP---FIGSLEYAAFLRSGNP 177
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
F P+ + D + LNYT GTT PKGVV ++ ++A++ I + K V LWTLP
Sbjct: 178 DFLPPPPRDEWDAISLNYTSGTTGNPKGVVCHHRGAALMALNKTIHGEMGKHPVYLWTLP 237
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA- 297
+FH NGWSF+W AV T+VCLR A V+ LI HGVTH+CGAPIV++ L ++P+
Sbjct: 238 LFHCNGWSFSWTVAVQAGTHVCLRWVRARVVYDLIADHGVTHLCGAPIVMSTLLNAPDED 297
Query: 298 -KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
++ +TA +PPP VL GF V H YG TE G + WK +W+ LP
Sbjct: 298 KRRFSHEAIFITAAAPPPEAVLAAMRDAGFRVLHLYGLTETYGPAMVNEWKAEWDALPPA 357
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
E+A+ KARQGVR + L+EV ++D ET V DG+T GE++MRG +M GYLK+ +AT +
Sbjct: 358 EQAAHKARQGVRYLSLSEVAVLDSETMQPVPADGETMGEVMMRGNVVMKGYLKNQKATEE 417
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
G ++TGD+G+MHPDGY+++KDRSKD+IISGGENISS E+E LY HP V + AVV
Sbjct: 418 AFSGGWFHTGDLGVMHPDGYVQLKDRSKDIIISGGENISSIEVEDALYRHPKVMQCAVVA 477
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
PD W E P AFV L+ + E +I+ YC+A + R+ P ++F + LPKT+T
Sbjct: 478 MPDEKWGERPVAFVELRPNVHA-----DEAEILSYCKATLARFKCPSRIIF-ETLPKTST 531
Query: 537 GKVQKYVLGDIANSMS 552
GK+QK+ L A ++
Sbjct: 532 GKIQKFALRARAKQLA 547
>gi|384081700|ref|ZP_09992875.1| acyl-CoA synthase [gamma proteobacterium HIMB30]
Length = 547
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/543 (44%), Positives = 329/543 (60%), Gaps = 21/543 (3%)
Query: 6 PNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGH 65
P AN PL+PL FI+R A D + IYN +W Q Y+RC + +L G+ G
Sbjct: 14 PTAANFVPLSPLSFIKRTAQVFGDQTATIYNGRQQSWRQIYQRCCAFSDALRRNGVEKGD 73
Query: 66 VVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL 125
VVSV+A N P M EL F+V M+G + NTINTRLD TI+ IL H+E + + D +L
Sbjct: 74 VVSVLAFNTPEMIELQFSVAMAGGVLNTINTRLDPETIAGILNHAEPETLVFDAELGDVL 133
Query: 126 LEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPP--ADFVDTYENMLAKGDPQFSWV 183
++ +S + P +L+ SSP +P D +D YE+ + GDP +W
Sbjct: 134 VDALSRC---THQPAHLLVI--------SSPGLDLPDQLTDVID-YEDFVETGDPASAWS 181
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P S+ D LNYT GT PKGVV ++ +++A+ ++ W VP + L+T+P+FH N
Sbjct: 182 LPASEWDAFGLNYTSGTGGRPKGVVISHRGAYLMAMGTVPAWNVPMHPIYLYTVPLFHCN 241
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLD 301
GW W A+V T +CL+K +A T+F +I K+ VTH GAP+VL+LL ++P KQ D
Sbjct: 242 GWGHAWMNALVAGTIICLKKIEAATIFDVISKYRVTHFGGAPVVLSLLVNAPSEHKKQFD 301
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV ++TAG+PPP +L +TE LG V YG TE G + CAW P W+ L ERA +
Sbjct: 302 HPVHVMTAGAPPPPAILEQTEQLGLEVMQVYGLTETYGHIMHCAWNPSWDALGFSERAEI 361
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGV+ EV++VD E G V DG++ GEIV+R ++M GY KDP AT + K G
Sbjct: 362 KARQGVQFTHTEEVEVVDLERGDPVPWDGRSEGEIVIRSNTVMKGYHKDPIATEEAFKGG 421
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GDV + HPDGY+EIKDR KDVIISGGENISS E+E++LY P V AAVV + D
Sbjct: 422 FFRSGDVAVRHPDGYIEIKDRLKDVIISGGENISSVEVENILYRIPGVACAAVVAKADDK 481
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+P FV L E ++IQ+CR + + PK ++F E+PKT+TGKVQK
Sbjct: 482 WGEVPVGFVELSHDAKP----INEAEVIQFCRQHLAGFKTPKQIIF-GEIPKTSTGKVQK 536
Query: 542 YVL 544
+VL
Sbjct: 537 FVL 539
>gi|400754083|ref|YP_006562451.1| acyl-CoA synthetase [Phaeobacter gallaeciensis 2.10]
gi|398653236|gb|AFO87206.1| acyl-CoA synthetase [Phaeobacter gallaeciensis 2.10]
Length = 542
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/551 (41%), Positives = 328/551 (59%), Gaps = 21/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN PLTPL + RAA D P+++Y + T++ Y RC +LAS+L+ G+ P
Sbjct: 10 LEKTAANYVPLTPLSHLRRAAHVFADVPAVVYGNHRKTYAAYYDRCTRLASALAGMGVRP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+ + PN+PA E HF VP GA+ NTINTRLD T++ I H E+K+V VD S
Sbjct: 70 GEVVATLIPNLPAQAEAHFGVPACGAVLNTINTRLDVSTVAYIFDHGEAKVVLVD--SQF 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L L + P ++ + DD+ +S P YE++LA F W+
Sbjct: 128 LTLAEEAKAACDGPGPLIIEVPDDQASYPASGRHP---------IYEDILAAAAHDFDWI 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + + LNYT GTT PKGVV ++ +++ + ++I W + Q L +P+FH N
Sbjct: 179 MPQDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVISWRMVMQPKYLAIVPLFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW+ TW V+G T +C R AP ++ I G TH GAPIVLN+L ++P+ + D
Sbjct: 239 GWNHTWMMPVLGGTLICCRDITAPAIYDAIADEGATHFGGAPIVLNMLVNAPDGDRRSFD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWK-PKWNKLPARERAS 360
V + TAG+PP L + E+LGF V+ YG TE G C WK W+ L + RA+
Sbjct: 299 HTVEVFTAGAPPAPATLEKIEALGFHVTQVYGLTETYGHVTECLWKGDSWDTLDQQGRAA 358
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
+KARQGV + + ++ + + +GQ +GEIVMRG S+M GYLK+P+AT++ +
Sbjct: 359 IKARQGVAFPMMDHITVMRDDM-QQIAMNGQDQGEIVMRGNSVMKGYLKNPDATAEAFQG 417
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +++GD+ + HPDGY++I DR+KD+IISGGENISS E+E VL HP VN AAVV +PD
Sbjct: 418 GYFHSGDIAVQHPDGYIQIADRAKDIIISGGENISSVEVEGVLMGHPDVNLAAVVAKPDD 477
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV LK G D+I++ R + + PK VVF ELPKT+TGK+Q
Sbjct: 478 KWGEVPCAFVELKPGA-----TVDPADLIRFARETLAGFKAPKQVVF-QELPKTSTGKIQ 531
Query: 541 KYVLGDIANSM 551
K+ L A ++
Sbjct: 532 KFELRQQAKAL 542
>gi|78062574|ref|YP_372482.1| acyl-CoA synthetase [Burkholderia sp. 383]
gi|77970459|gb|ABB11838.1| AMP-dependent synthetase and ligase [Burkholderia sp. 383]
Length = 556
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/548 (43%), Positives = 332/548 (60%), Gaps = 28/548 (5%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTP+ F+ R A D +I++ D TW +T R QLAS+L+ GI G V+
Sbjct: 14 ANYVPLTPIDFLVRTAEVYGDRLAIVHGDVRRTWGETCTRAKQLASALARLGIERGDTVA 73
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----HLSSSL 124
+ PNIPAM E HF VPM+GA+ NTINTRLD ++ +L+H E+K++ VD +
Sbjct: 74 AMLPNIPAMVEAHFGVPMAGAVLNTINTRLDVSSVLFMLRHGEAKVLIVDTEYAEFAHRA 133
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
LEV L K+V + D + + P R A YE ++A GD ++W
Sbjct: 134 ALEVPGL--------KIVSVAD-----AMPADPARFAGAT---DYEALVASGDAGYAWTP 177
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
P + + + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPMFH NG
Sbjct: 178 PADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHAVYLWTLPMFHCNG 237
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLDR 302
W F W A NVCLRKFDA TVF LIR+ +TH CGAPIV + ++++P + +D
Sbjct: 238 WCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERITHYCGAPIVQSAIANAPAEFREGIDH 297
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
V + AG+ P V+ + + +GF + H YG TE+ G CA + W +L +RA L
Sbjct: 298 TVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAKQSHWEELSDEDRARLN 357
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+P+AT + G
Sbjct: 358 ARQGVRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKGYLKNPKATDEAFHGGW 417
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
++TGD+ ++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV PDP W
Sbjct: 418 FHTGDLAVLMPDGYIRIKDRKKDIIISGGENISSIEVEDALYRHPAVAVAAVVAMPDPKW 477
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E+PCAFV L+ G TE++I+ +C+A + + VPK V F ELPKT+TGK+QK+
Sbjct: 478 GEVPCAFVELREGAS-----VTEEEIVAHCKALLAGFKVPKAVRF-GELPKTSTGKIQKF 531
Query: 543 VLGDIANS 550
L + S
Sbjct: 532 QLRNAVGS 539
>gi|119897986|ref|YP_933199.1| acyl-CoA synthetase [Azoarcus sp. BH72]
gi|119670399|emb|CAL94312.1| putative AMP-binding protein [Azoarcus sp. BH72]
Length = 550
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/552 (44%), Positives = 334/552 (60%), Gaps = 20/552 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ N AN PLTPL FIER+A D ++I+ YTW ++Y R +LAS+L G+
Sbjct: 13 LEKNAANYVPLTPLTFIERSAYIYPDRVAVIHGKRRYTWLESYTRSRRLASALKQLGVGK 72
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V+VI N P M+E HF VP GA+ NT+NTRLDA ++ IL H E+K++ D S
Sbjct: 73 NDTVAVILNNTPEMFECHFGVPACGAVLNTVNTRLDAEGVAFILNHGEAKVLITDREYSR 132
Query: 124 LLLEVVSLFPPHSKTPKLVLI-TDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ + + L + P +++I DD E + P R+ D YE +L G+P+F +
Sbjct: 133 MVGKAIEL----ANRPDMIVIDVDDPEYTG---PGERVGKLD----YEALLETGNPEFEY 181
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
+P + D + LNYT GTT PKGVV ++ ++ A+ +++ W +P SV LWTLPMFH
Sbjct: 182 EQPGDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAMSNIVSWGMPPHSVYLWTLPMFHC 241
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQL 300
NGW F W A NVCLR+ D +F +R+HGVTH CGAPIV ++L+++PE K +
Sbjct: 242 NGWCFAWTMAANAGVNVCLRRVDPRLIFDAMREHGVTHYCGAPIVHSMLANAPEEWRKGI 301
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
+ V L A +PPPA V+ +G ++H YG TE G CA +W LP E+ +
Sbjct: 302 NHKVSGLVAAAPPPAAVIEGMAKIGIDITHVYGLTETYGPASVCAKHDEWRDLPLAEQVA 361
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
RQGVR + ++DP T V D +T GEI+ RG +M GYLK+ +AT + +
Sbjct: 362 KNGRQGVRYHAQEGITVLDPTTMEPVPWDNETMGEIMFRGNLVMKGYLKNEKATEESFRG 421
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G Y+TGD+ +M PDGY++IKDRSKDVIISGGENISS E+E LY HP V AAVV PD
Sbjct: 422 GWYHTGDLAVMQPDGYVKIKDRSKDVIISGGENISSIEVEDALYKHPAVMAAAVVAAPDE 481
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV LK G T ++II +CR + + PK V+F LPKT+TGK+Q
Sbjct: 482 KWGEVPCAFVELKDGA-----TVTAEEIIAHCREHLAGFKTPKKVIF-GALPKTSTGKIQ 535
Query: 541 KYVLGDIANSMS 552
K+VL + A S S
Sbjct: 536 KFVLREQAKSSS 547
>gi|126443941|ref|YP_001062075.1| acyl-CoA synthetase [Burkholderia pseudomallei 668]
gi|126223432|gb|ABN86937.1| AMP-binding enzyme [Burkholderia pseudomallei 668]
Length = 553
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/547 (44%), Positives = 330/547 (60%), Gaps = 28/547 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ FI RAA + ++++ + TWS+TY R +LAS+L G+
Sbjct: 9 LGRREANYVPLTPIDFIARAAEVYGERLAVVHGEIRRTWSETYARARRLASALERAGVGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----H 119
G V+ + PNIPAM E HF VPM+GA+ N +NTRLD ++ +L+H E+K++ VD
Sbjct: 69 GDTVAALLPNIPAMIEAHFGVPMAGAVLNALNTRLDVASMLFMLRHGEAKVLIVDTEYAE 128
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ LEV L +V + D + + P R P A +D YE LA GDP
Sbjct: 129 FAHRAALEVPGL--------AIVSVAD-----AMPADPARFPAA--LD-YEAFLAGGDPA 172
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
++W P + + + LNYT GTT PKGVV ++ ++ A+ +L++W +PK +V LWTLPM
Sbjct: 173 YAWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNLLEWDMPKHAVYLWTLPM 232
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A NVCLRKFDA V LIR+ VTH GAPIV + ++++P +
Sbjct: 233 FHCNGWCFPWAVAARAGVNVCLRKFDAKRVLELIRRERVTHYSGAPIVQSAIANAPAEWR 292
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
+ V AG+ P V+ + + +GF ++H YG TE+ G CA + W LP E
Sbjct: 293 AGIAHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAKQAHWASLPDDE 352
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
A L ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+P AT +
Sbjct: 353 LAQLNARQGVRYHLQAGATVLDPDTMAPVPADGETLGEIMFRGNLCMKGYLKNPHATDEA 412
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV
Sbjct: 413 FAGGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVAL 472
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PDP W E+PCAFV L+ GM TE++II +CR + Y +PKTV F ELPKT+TG
Sbjct: 473 PDPKWGEVPCAFVELRE-----GMSATEEEIIAHCRLLLAAYKIPKTVRF-GELPKTSTG 526
Query: 538 KVQKYVL 544
K+QK+ L
Sbjct: 527 KIQKFQL 533
>gi|53721757|ref|YP_110742.1| acyl-CoA synthetase [Burkholderia pseudomallei K96243]
gi|167722961|ref|ZP_02406197.1| acyl-CoA synthetase [Burkholderia pseudomallei DM98]
gi|167741946|ref|ZP_02414720.1| acyl-CoA synthetase [Burkholderia pseudomallei 14]
gi|167897582|ref|ZP_02484984.1| acyl-CoA synthetase [Burkholderia pseudomallei 7894]
gi|167922155|ref|ZP_02509246.1| acyl-CoA synthetase [Burkholderia pseudomallei BCC215]
gi|217419171|ref|ZP_03450678.1| AMP-binding enzyme [Burkholderia pseudomallei 576]
gi|237510291|ref|ZP_04523006.1| long-chain-fatty-acid--CoA ligase [Burkholderia pseudomallei
MSHR346]
gi|386864510|ref|YP_006277458.1| acyl-CoA synthetase [Burkholderia pseudomallei 1026b]
gi|418395753|ref|ZP_12969676.1| acyl-CoA synthetase [Burkholderia pseudomallei 354a]
gi|418535632|ref|ZP_13101375.1| acyl-CoA synthetase [Burkholderia pseudomallei 1026a]
gi|418555514|ref|ZP_13120209.1| acyl-CoA synthetase [Burkholderia pseudomallei 354e]
gi|52212171|emb|CAH38190.1| putative AMP-binding enzyme [Burkholderia pseudomallei K96243]
gi|217398475|gb|EEC38490.1| AMP-binding enzyme [Burkholderia pseudomallei 576]
gi|235002496|gb|EEP51920.1| long-chain-fatty-acid--CoA ligase [Burkholderia pseudomallei
MSHR346]
gi|385354779|gb|EIF61019.1| acyl-CoA synthetase [Burkholderia pseudomallei 1026a]
gi|385368499|gb|EIF73945.1| acyl-CoA synthetase [Burkholderia pseudomallei 354e]
gi|385373637|gb|EIF78649.1| acyl-CoA synthetase [Burkholderia pseudomallei 354a]
gi|385661638|gb|AFI69060.1| acyl-CoA synthetase [Burkholderia pseudomallei 1026b]
Length = 553
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/547 (44%), Positives = 330/547 (60%), Gaps = 28/547 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ FI RAA + ++++ + TWS+TY R +LAS+L G+
Sbjct: 9 LGRREANYVPLTPIDFIARAAEVYGERLAVVHGEIRRTWSETYARARRLASALERAGVGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----H 119
G V+ + PNIPAM E HF VPM+GA+ N +NTRLD ++ +L+H E+K++ VD
Sbjct: 69 GDTVAALLPNIPAMIEAHFGVPMAGAVLNALNTRLDVASMLFMLRHGEAKVLIVDTEYAE 128
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ LEV L +V + D + + P R P A +D YE LA GDP
Sbjct: 129 FAHRAALEVPGL--------AIVSVAD-----AMPADPARFPAA--LD-YEAFLAGGDPA 172
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
++W P + + + LNYT GTT PKGVV ++ ++ A+ +L++W +PK +V LWTLPM
Sbjct: 173 YAWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNLLEWDMPKHAVYLWTLPM 232
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A NVCLRKFDA V LIR+ VTH GAPIV + ++++P +
Sbjct: 233 FHCNGWCFPWAVAARAGVNVCLRKFDAKRVLELIRRERVTHYSGAPIVQSAIANAPAEWR 292
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
+ V AG+ P V+ + + +GF ++H YG TE+ G CA + W LP E
Sbjct: 293 AGIAHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAKQAHWASLPDDE 352
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
A L ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+P AT +
Sbjct: 353 LAQLNARQGVRYHLQAGATVLDPDTMAPVPADGETLGEIMFRGNLCMKGYLKNPHATDEA 412
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV
Sbjct: 413 FAGGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVAL 472
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PDP W E+PCAFV L+ GM TE++II +CR + Y +PKTV F ELPKT+TG
Sbjct: 473 PDPKWGEVPCAFVELRD-----GMSATEEEIIAHCRLLLAAYKIPKTVRF-GELPKTSTG 526
Query: 538 KVQKYVL 544
K+QK+ L
Sbjct: 527 KIQKFQL 533
>gi|53716930|ref|YP_106004.1| acyl-CoA synthetase [Burkholderia mallei ATCC 23344]
gi|67643326|ref|ZP_00442073.1| acyl-CoA synthase [Burkholderia mallei GB8 horse 4]
gi|121597408|ref|YP_990118.1| acyl-CoA synthetase [Burkholderia mallei SAVP1]
gi|167001481|ref|ZP_02267278.1| AMP-binding enzyme [Burkholderia mallei PRL-20]
gi|254174061|ref|ZP_04880723.1| AMP-binding enzyme [Burkholderia mallei ATCC 10399]
gi|254200855|ref|ZP_04907220.1| AMP-binding enzyme [Burkholderia mallei FMH]
gi|254204823|ref|ZP_04911176.1| AMP-binding enzyme [Burkholderia mallei JHU]
gi|52422900|gb|AAU46470.1| AMP-binding domain protein [Burkholderia mallei ATCC 23344]
gi|121225206|gb|ABM48737.1| AMP-binding domain protein [Burkholderia mallei SAVP1]
gi|147748467|gb|EDK55542.1| AMP-binding enzyme [Burkholderia mallei FMH]
gi|147754409|gb|EDK61473.1| AMP-binding enzyme [Burkholderia mallei JHU]
gi|160695107|gb|EDP85077.1| AMP-binding enzyme [Burkholderia mallei ATCC 10399]
gi|238524649|gb|EEP88081.1| acyl-CoA synthase [Burkholderia mallei GB8 horse 4]
gi|243062786|gb|EES44972.1| AMP-binding enzyme [Burkholderia mallei PRL-20]
Length = 553
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/547 (44%), Positives = 330/547 (60%), Gaps = 28/547 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ FI RAA + ++++ + TWS+TY R +LAS+L G+
Sbjct: 9 LGRREANYVPLTPIDFIARAAEVYGERLAVVHGEIRRTWSETYARARRLASALERAGVGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----H 119
G V+ + PNIPAM E HF VPM+GA+ N +NTRLD ++ +L+H E+K++ VD
Sbjct: 69 GDTVAALLPNIPAMIEAHFGVPMAGAVLNALNTRLDVASMLFMLRHGEAKVLIVDTEYAE 128
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ LEV L +V + D + + P R P A +D YE LA GDP
Sbjct: 129 FAHRAALEVPGL--------AIVSVAD-----AMPADPARFPAA--LD-YEAFLAGGDPA 172
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
++W P + + + LNYT GTT PKGVV ++ ++ A+ +L++W +PK +V LWTLPM
Sbjct: 173 YAWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNLLEWDMPKHAVYLWTLPM 232
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A NVCLRKFDA V LIR+ VTH GAPIV + ++++P +
Sbjct: 233 FHCNGWCFPWAVAARAGVNVCLRKFDAKRVLELIRRERVTHYSGAPIVQSAIANAPAEWR 292
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
+ V AG+ P V+ + + +GF ++H YG TE+ G CA + W LP E
Sbjct: 293 AGIAHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAKQAHWASLPDDE 352
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
A L ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+P AT +
Sbjct: 353 LAQLNARQGVRYHLQAGATVLDPDTMAPVPADGETLGEIMFRGNLCMKGYLKNPHATDEA 412
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV
Sbjct: 413 FAGGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVEVAAVVAL 472
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PDP W E+PCAFV L+ GM TE++II +CR + Y +PKTV F ELPKT+TG
Sbjct: 473 PDPKWGEVPCAFVELRD-----GMSATEEEIIAHCRLLLAAYKIPKTVRF-GELPKTSTG 526
Query: 538 KVQKYVL 544
K+QK+ L
Sbjct: 527 KIQKFQL 533
>gi|372489423|ref|YP_005028988.1| acyl-CoA synthetase [Dechlorosoma suillum PS]
gi|359355976|gb|AEV27147.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Dechlorosoma
suillum PS]
Length = 552
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/551 (43%), Positives = 338/551 (61%), Gaps = 19/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ N AN PL+PL FI R+A + S+I+ YTW +T+ R +LAS+L + GI
Sbjct: 16 LEKNAANYVPLSPLTFIARSAYIYPERVSVIHGQRRYTWLETFNRARRLASALEARGIKE 75
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ N P MYE HF VP++GA+ NT+NTRLD ++ +L H E+K++ D S
Sbjct: 76 GDTVAVMLNNTPEMYECHFGVPVTGAVLNTLNTRLDPEAVAFMLNHGEAKILITDKEYSH 135
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ P K + +++ D + S + P + D YE +LA+G P + W
Sbjct: 136 IV------GPALEKLGRSIVVIDVND-SEYTGPGDLLGEKD----YEALLAEGTPDYEWK 184
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + D + LNYT GTT PKGVV ++ ++ A+ +++ W +P SV LWTLPMFH N
Sbjct: 185 GPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAMSNIVSWGMPPHSVYLWTLPMFHCN 244
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW F W A TNVCLR+ D + IR++ VTH CGAPIV ++L+++P + ++
Sbjct: 245 GWCFPWTMAANAGTNVCLRRVDPKLILQSIRENKVTHYCGAPIVHSMLANAPAEWREGIN 304
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V L A +PPPA V+ +GF ++H YG TE G CA +P+W LP E+ +L
Sbjct: 305 HGVSGLIAAAPPPAAVIEGMAKIGFKITHVYGLTETYGPASVCAQQPEWFDLPVGEQVNL 364
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
RQGVR + ++DP T +V D +T GEI+ RG +M GYLK+P+AT + G
Sbjct: 365 NGRQGVRYHAQEAITVLDPATMEAVPWDNETMGEIMFRGNLVMKGYLKNPKATEESFAGG 424
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
Y+TGD+ +M DGY++IKDRSKDVIISGGENISS E+E LY HP V AAVV PDP
Sbjct: 425 YYHTGDLAVMQADGYVKIKDRSKDVIISGGENISSIEVEDTLYRHPAVMAAAVVATPDPK 484
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+P AF+ LK G TE +II++CR + R+ VPK V+F LPKT+TGK+QK
Sbjct: 485 WGEVPAAFIELKDGVS-----ITEVEIIEFCREHMARFKVPKKVIF-GPLPKTSTGKIQK 538
Query: 542 YVLGDIANSMS 552
YVL ++A S +
Sbjct: 539 YVLREMAKSTA 549
>gi|134278936|ref|ZP_01765649.1| AMP-binding enzyme [Burkholderia pseudomallei 305]
gi|167905933|ref|ZP_02493138.1| acyl-CoA synthetase [Burkholderia pseudomallei NCTC 13177]
gi|134249355|gb|EBA49436.1| AMP-binding enzyme [Burkholderia pseudomallei 305]
Length = 553
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/547 (44%), Positives = 330/547 (60%), Gaps = 28/547 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ FI RAA + ++++ + TWS+TY R +LAS+L G+
Sbjct: 9 LGRREANYVPLTPIDFIARAAEVYGERLAVVHGEIRRTWSETYARARRLASALERAGVGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----H 119
G V+ + PNIPAM E HF VPM+GA+ N +NTRLD ++ +L+H E+K++ VD
Sbjct: 69 GDTVAALLPNIPAMIEAHFGVPMAGAVLNALNTRLDVASMLFMLRHGEAKVLIVDTEYAE 128
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ LEV L +V + D + + P R P A +D YE LA GDP
Sbjct: 129 FAHRAALEVPGL--------AIVSVAD-----AMPADPARFPAA--LD-YEAFLAGGDPA 172
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
++W P + + + LNYT GTT PKGVV ++ ++ A+ +L++W +PK +V LWTLPM
Sbjct: 173 YAWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNLLEWDMPKHAVYLWTLPM 232
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A NVCLRKFDA V LIR+ VTH GAPIV + ++++P +
Sbjct: 233 FHCNGWCFPWAVAARAGVNVCLRKFDAKRVLELIRRERVTHYSGAPIVQSAIANAPAEWR 292
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
+ V AG+ P V+ + + +GF ++H YG TE+ G CA + W LP E
Sbjct: 293 AGIAHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAKQAHWASLPDDE 352
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
A L ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+P AT +
Sbjct: 353 LAQLNARQGVRYHLQAGATVLDPDTMAPVPADGETLGEIMFRGNLCMKGYLKNPHATDEA 412
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV
Sbjct: 413 FAGGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVAL 472
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PDP W E+PCAFV L+ GM TE++II +CR + Y +PKTV F ELPKT+TG
Sbjct: 473 PDPKWGEVPCAFVELRD-----GMSATEEEIIAHCRLLLAAYKIPKTVRF-GELPKTSTG 526
Query: 538 KVQKYVL 544
K+QK+ L
Sbjct: 527 KIQKFQL 533
>gi|257092691|ref|YP_003166332.1| acyl-CoA synthetase [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
gi|257045215|gb|ACV34403.1| AMP-dependent synthetase and ligase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 545
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 242/549 (44%), Positives = 334/549 (60%), Gaps = 19/549 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PLTPL FI R A + ++I+ Y+W +T+ R +LAS+LS+ GI
Sbjct: 9 LDKNTANYTPLTPLTFIARTAYVYPERTAVIHGQRRYSWLETFSRARRLASALSALGIGE 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + N P M E HF VP++GA+ NT+NTRLDA TI+ +L H E+K++ D S
Sbjct: 69 GDTVAAMLNNTPEMVECHFGVPVTGAVLNTLNTRLDAETIAFMLDHGEAKVLITDREYSP 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ + ++ + P +V+ DD E S P R+ + YE +A G P F W
Sbjct: 129 TVKKALAAV----QRPIMVIDVDDSEYSG---PGERLGSQE----YEAFIAAGSPDFPWR 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++ ++ ++I W +P SV LWTLPMFH N
Sbjct: 178 GPNDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNSMSNIISWGMPPHSVYLWTLPMFHCN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W A TNVCLR+ D +F IR HGVTH CGAPIV +L+++SP + +
Sbjct: 238 GWCFVWTMAANAGTNVCLRRVDPKLIFDAIRAHGVTHYCGAPIVHSLMANSPAELRAGIT 297
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+ V L A +PPPA V+ ++G ++H YG TE G CA W +LP ++ L
Sbjct: 298 QKVCGLIAAAPPPAAVIEAMANIGVDLTHVYGLTETYGPAAVCAKHGHWAELPLAQQVDL 357
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
RQGVR + +++P T V D +T GEI+ RG +M GYLK+ +AT + G
Sbjct: 358 NGRQGVRYHAQEAITVLEPTTMEPVPWDHETMGEIMFRGNLVMKGYLKNAKATEESFAGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
Y+TGD+ +MHPDGY++IKDRSKDVIISGGENISS E+E VLY HP V AAVV PD
Sbjct: 418 WYHTGDLAVMHPDGYVKIKDRSKDVIISGGENISSIEVEDVLYKHPAVIAAAVVATPDAT 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAF+ L+ G + +E+++I +CR + R+ VPK V+F LPKT+TGK+QK
Sbjct: 478 WGEVPCAFLELRDGATA-----SEQEVIDFCRQHMARFKVPKRVIF-GSLPKTSTGKIQK 531
Query: 542 YVLGDIANS 550
++L D A S
Sbjct: 532 FILRDRAKS 540
>gi|421864766|ref|ZP_16296451.1| hypothetical protein I35_1141 [Burkholderia cenocepacia H111]
gi|358075386|emb|CCE47329.1| hypothetical protein I35_1141 [Burkholderia cenocepacia H111]
Length = 547
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/542 (44%), Positives = 331/542 (61%), Gaps = 28/542 (5%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTP+ F+ RAA + +I++ D TW +T R QLAS+L+ G+ G V+
Sbjct: 11 ANYVPLTPIDFLIRAAEVYGERLAIVHGDVRRTWGETCTRAKQLASALAQAGVGRGDTVA 70
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----HLSSSL 124
+ PNIPAM E HF VPM+GA+ NTINTRLD ++ +L+H E+K++ VD ++
Sbjct: 71 ALLPNIPAMVEAHFGVPMAGAVLNTINTRLDVSSVLFMLRHGEAKVLIVDTEYAEVAQRA 130
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
LEV L K+V + D + + P R A YE +A GDP ++W
Sbjct: 131 ALEVPGL--------KIVSVAD-----ALPADPDRFAGAT---DYETFVAGGDPDYAWTP 174
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
P + + + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPMFH NG
Sbjct: 175 PADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHAVYLWTLPMFHCNG 234
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDR 302
W F W A NVCLRKFDA TVF LIR+ +TH CGAPIV + ++++P + +D
Sbjct: 235 WCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERITHYCGAPIVQSAIANAPAEFRAGIDH 294
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
V + AG+ P V+ + + +GF + H YG TE+ G CA + W+ + ERA L
Sbjct: 295 TVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAKQSHWDAVSDEERARLN 354
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+P+AT + G
Sbjct: 355 ARQGVRYHLEAGATVLDPDTMTPVPADGETLGEIMFRGNICMKGYLKNPKATDEAFHGGW 414
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
++TGD+ ++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV PDP W
Sbjct: 415 FHTGDLAVLMPDGYIRIKDRKKDIIISGGENISSIEVEDALYRHPAVAVAAVVAMPDPKW 474
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E+PCAFV L+ G + TE +I+ +CR + + VPK V F ELPKT+TGK+QK+
Sbjct: 475 GELPCAFVELREGASA-----TEAEIVAHCRQLLAGFKVPKAVRF-GELPKTSTGKIQKF 528
Query: 543 VL 544
L
Sbjct: 529 QL 530
>gi|326528703|dbj|BAJ97373.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 496
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/500 (46%), Positives = 325/500 (65%), Gaps = 14/500 (2%)
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V+V A N+PAM ELHFAVPM+GA+ +N+RLDA S++L+HSE+++VFVD +
Sbjct: 3 VAVFAQNVPAMCELHFAVPMAGAVICALNSRLDAAMASVLLRHSEARVVFVDAALLGVAR 62
Query: 127 EVVSLF-PPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENML-AKGDPQFSWVR 184
E + L + P +VLI + + S YE ++ A G P+F+
Sbjct: 63 EALRLLSEAGAAAPVVVLIRELLDGCDDGSASLVSGTTGAEHEYEALVGAGGSPEFAVRW 122
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
P + +P+ LNYT GTTS PKGV+ ++ ++ ++ S++ + V LW++PMFH NG
Sbjct: 123 PADENEPIALNYTSGTTSRPKGVIYTHRGAYLNSLASVLLNDMASMPVYLWSVPMFHCNG 182
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL-SSSPEAKQ---L 300
W TWG A G TNVCLRK VF + +HGVTHM GAP VL ++ ++PE ++
Sbjct: 183 WCMTWGVAAQGGTNVCLRKVTGAAVFDAVARHGVTHMGGAPTVLGMIVHAAPEERRPLPP 242
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
R V ++T G+PPP VL R E LGF+V H YG TE G CAWKP+W+ LPA ERA+
Sbjct: 243 GRKVAVMTGGAPPPPAVLFRMEELGFLVIHSYGLTETYGPATVCAWKPEWDALPADERAA 302
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
+KARQG+ +GL EVD+ DP T SV DG T GE++ RG ++M GY KD AT++ +
Sbjct: 303 IKARQGLHHLGL-EVDVKDPATMRSVPADGATMGEVMFRGNTVMSGYYKDAAATAEALAG 361
Query: 421 GRYYTGDVGMMHP-DGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G + +GD+ + P DGY++++DRSKD+IISGGENIS+ E+E+ L++HP V EAAVVGRPD
Sbjct: 362 GWFRSGDLAVRVPGDGYVKVRDRSKDIIISGGENISTIEVEAALFAHPAVAEAAVVGRPD 421
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E PCAFV +K G ++++ +CR R+PRYM P+TVV ++ELPKTATGKV
Sbjct: 422 EHWGETPCAFVVVKNGER-----VEPEEVVAFCRGRLPRYMAPRTVVIVEELPKTATGKV 476
Query: 540 QKYVLGDIANSM-SMSHSRM 558
QK+ L + A +M S+S S++
Sbjct: 477 QKFALREKAKAMGSLSTSKL 496
>gi|116695093|ref|YP_840669.1| acyl-CoA synthetase [Ralstonia eutropha H16]
gi|113529592|emb|CAJ95939.1| Acyl-CoA synthetase [Ralstonia eutropha H16]
Length = 544
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/548 (43%), Positives = 328/548 (59%), Gaps = 31/548 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PLTP+ F+ RAA +I++ W TY R +LAS+L+ GI
Sbjct: 9 LARNAANFVPLTPIDFLVRAAEVYGQRLAIVHGPLRQNWRDTYARARRLASALARAGIGK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----H 119
G V+ + PN PAM E HF VPM+GA+ N +N RLDA + +L+H E++++ D
Sbjct: 69 GDTVAALLPNTPAMVEAHFGVPMAGAVLNALNIRLDAANLVFMLRHGEARVLLADTEFAD 128
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT-YENMLAKGDP 178
L+ + LE+ P L +I + +P F DT YE LA GD
Sbjct: 129 LARQMALEI----------PGLKVIAVHDVLGPQEAP--------FGDTDYEAFLASGDS 170
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
++W P + + + LNYT GTT PKGVV ++ I AV ++++W +PK V LWTLP
Sbjct: 171 DYAWHMPADEWEAIALNYTSGTTGDPKGVVYHHRGAAINAVSNILEWDLPKHPVYLWTLP 230
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA- 297
MFH NGW F W A NVCLRKF+ VF L+R+ GVTH C APIV L ++P A
Sbjct: 231 MFHCNGWCFPWTVAARAGVNVCLRKFEPRLVFDLMREEGVTHYCAAPIVHTALVNAPAAW 290
Query: 298 -KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
+ + PVR + AG+PPPA VL + E++GF ++H YG TE+ G CA + W+ L +
Sbjct: 291 REGVRGPVRGMVAGAPPPAAVLAQMEAMGFELTHVYGLTEVYGPAAVCAEQDDWSTLSEQ 350
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
+RA KARQGVR ++V ++DP++ V DG+T GEI+ RG M GYLK+ +AT +
Sbjct: 351 DRAVRKARQGVRYHLQSQVAVLDPDSMQPVPADGETIGEIMFRGNICMKGYLKNEKATRE 410
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
G ++TGD+G+ PDGY++IKDRSKD+IISGGENISS E+E LY HP V AAVV
Sbjct: 411 AFAGGWFHTGDLGVCMPDGYIKIKDRSKDIIISGGENISSVEVEDALYRHPAVLAAAVVA 470
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
+PD W E PCAFV LK G + +++I +CR + + VPK V F LPKT+T
Sbjct: 471 QPDARWGETPCAFVELKDGAS-----VSAEELIAHCRTLLAGFKVPKAVYF-GPLPKTST 524
Query: 537 GKVQKYVL 544
GK+QK+ L
Sbjct: 525 GKIQKFEL 532
>gi|76818203|ref|YP_337457.1| acyl-CoA synthetase [Burkholderia pseudomallei 1710b]
gi|126455744|ref|YP_001075029.1| acyl-CoA synthetase [Burkholderia pseudomallei 1106a]
gi|167819126|ref|ZP_02450806.1| acyl-CoA synthetase [Burkholderia pseudomallei 91]
gi|167827503|ref|ZP_02458974.1| acyl-CoA synthetase [Burkholderia pseudomallei 9]
gi|167848979|ref|ZP_02474487.1| acyl-CoA synthetase [Burkholderia pseudomallei B7210]
gi|167914244|ref|ZP_02501335.1| acyl-CoA synthetase [Burkholderia pseudomallei 112]
gi|226195244|ref|ZP_03790835.1| AMP-binding enzyme [Burkholderia pseudomallei Pakistan 9]
gi|242313950|ref|ZP_04812967.1| AMP-binding enzyme [Burkholderia pseudomallei 1106b]
gi|254189767|ref|ZP_04896276.1| AMP-binding enzyme [Burkholderia pseudomallei Pasteur 52237]
gi|254192816|ref|ZP_04899251.1| AMP-binding enzyme [Burkholderia pseudomallei S13]
gi|254263818|ref|ZP_04954683.1| AMP-binding enzyme [Burkholderia pseudomallei 1710a]
gi|403522310|ref|YP_006657879.1| acyl-CoA synthetase [Burkholderia pseudomallei BPC006]
gi|76582676|gb|ABA52150.1| AMP-binding domain protein [Burkholderia pseudomallei 1710b]
gi|126229512|gb|ABN92925.1| AMP-binding enzyme [Burkholderia pseudomallei 1106a]
gi|157937444|gb|EDO93114.1| AMP-binding enzyme [Burkholderia pseudomallei Pasteur 52237]
gi|169649570|gb|EDS82263.1| AMP-binding enzyme [Burkholderia pseudomallei S13]
gi|225933049|gb|EEH29045.1| AMP-binding enzyme [Burkholderia pseudomallei Pakistan 9]
gi|242137189|gb|EES23592.1| AMP-binding enzyme [Burkholderia pseudomallei 1106b]
gi|254214820|gb|EET04205.1| AMP-binding enzyme [Burkholderia pseudomallei 1710a]
gi|403077377|gb|AFR18956.1| acyl-CoA synthetase [Burkholderia pseudomallei BPC006]
Length = 553
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/547 (44%), Positives = 330/547 (60%), Gaps = 28/547 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ FI RAA + ++++ + TWS+TY R +LAS+L G+
Sbjct: 9 LGRREANYVPLTPIDFIARAAEVYGERLAVVHGEIRRTWSETYARARRLASALERAGVGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----H 119
G V+ + PNIPAM E HF VPM+GA+ N +NTRLD ++ +L+H E+K++ VD
Sbjct: 69 GDTVAALLPNIPAMIEAHFGVPMAGAVLNALNTRLDVASMLFMLRHGEAKVLIVDTEYAE 128
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ LEV L +V + D + + P R P A +D YE LA GDP
Sbjct: 129 FAHRAALEVPGL--------AIVSVAD-----AMPADPARFPAA--LD-YEAFLAGGDPA 172
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
++W P + + + LNYT GTT PKGVV ++ ++ A+ +L++W +PK +V LWTLPM
Sbjct: 173 YAWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNLLEWDMPKHAVYLWTLPM 232
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A NVCLRKFDA V L+R+ VTH GAPIV + ++++P +
Sbjct: 233 FHCNGWCFPWAVAARAGVNVCLRKFDAKRVLELVRRERVTHYSGAPIVQSAIANAPAEWR 292
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
+ V AG+ P V+ + + +GF ++H YG TE+ G CA + W LP E
Sbjct: 293 AGIAHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAKQAHWASLPDDE 352
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
A L ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+P AT +
Sbjct: 353 LAQLNARQGVRYHLQAGATVLDPDTMAPVPADGETLGEIMFRGNLCMKGYLKNPHATDEA 412
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV
Sbjct: 413 FAGGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVAL 472
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PDP W E+PCAFV L+ GM TE++II +CR + Y +PKTV F ELPKT+TG
Sbjct: 473 PDPKWGEVPCAFVELRD-----GMSATEEEIIAHCRLLLAAYKIPKTVRF-GELPKTSTG 526
Query: 538 KVQKYVL 544
K+QK+ L
Sbjct: 527 KIQKFQL 533
>gi|254300042|ref|ZP_04967488.1| AMP-binding enzyme [Burkholderia pseudomallei 406e]
gi|418543259|ref|ZP_13108628.1| acyl-CoA synthetase [Burkholderia pseudomallei 1258a]
gi|418549790|ref|ZP_13114812.1| acyl-CoA synthetase [Burkholderia pseudomallei 1258b]
gi|157809973|gb|EDO87143.1| AMP-binding enzyme [Burkholderia pseudomallei 406e]
gi|385353264|gb|EIF59619.1| acyl-CoA synthetase [Burkholderia pseudomallei 1258a]
gi|385353745|gb|EIF60062.1| acyl-CoA synthetase [Burkholderia pseudomallei 1258b]
Length = 553
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 244/547 (44%), Positives = 329/547 (60%), Gaps = 28/547 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ FI RAA + ++++ + TWS+TY R +LAS+L G+
Sbjct: 9 LGRREANYVPLTPIDFIARAAEVYGERLAVVHGEIRRTWSETYARARRLASALERAGVGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----H 119
G V+ + PNIPAM E HF VPM+GA+ N +NTRLD ++ +L+H E+K++ VD
Sbjct: 69 GDTVAALLPNIPAMIEAHFGVPMAGAVLNALNTRLDVASMLFMLRHGEAKVLIVDTEYAE 128
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ LEV L +V + D + + P R P A +D YE LA GDP
Sbjct: 129 FAHRAALEVPGL--------AIVSVAD-----AMPADPARFPAA--LD-YEAFLAGGDPA 172
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
++W P + + + LNYT GTT PKGVV ++ ++ A+ +L++W +PK +V LWTLPM
Sbjct: 173 YAWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNLLEWDMPKHAVYLWTLPM 232
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A NVCLRKFDA V LIR VTH GAPIV + ++++P +
Sbjct: 233 FHCNGWCFPWAVAARAGVNVCLRKFDAKRVLELIRHERVTHYSGAPIVQSAIANAPAEWR 292
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
+ V AG+ P V+ + + +GF ++H YG TE+ G CA + W LP E
Sbjct: 293 AGIAHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAKQAHWASLPDDE 352
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
A L ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+P AT +
Sbjct: 353 LAQLNARQGVRYHLQAGATVLDPDTMAPVPADGETLGEIMFRGNLCMKGYLKNPHATDEA 412
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV
Sbjct: 413 FAGGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVAL 472
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PDP W E+PCAFV L+ GM TE++II +CR + Y +PKTV F ELPKT+TG
Sbjct: 473 PDPKWGEVPCAFVELRD-----GMSATEEEIIAHCRLLLAAYKIPKTVRF-GELPKTSTG 526
Query: 538 KVQKYVL 544
K+QK+ L
Sbjct: 527 KIQKFQL 533
>gi|83949843|ref|ZP_00958576.1| AMP-binding protein [Roseovarius nubinhibens ISM]
gi|83837742|gb|EAP77038.1| AMP-binding protein [Roseovarius nubinhibens ISM]
Length = 542
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/542 (42%), Positives = 322/542 (59%), Gaps = 19/542 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTPL + RA D +++Y +T ++ + + R QLAS+L + G+ PG VV+
Sbjct: 15 ANFVPLTPLSHLRRAVQIYPDYEALVYGETRRSYREYHARVTQLASALKNLGLRPGDVVA 74
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PN+PA E HF VP SGA+ N INTRL+ TIS I H E++L VD ++ L L
Sbjct: 75 TLLPNVPAHVEAHFGVPASGAVLNAINTRLEPDTISYIFGHGEAQLALVD--TALLPLAE 132
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
++ K P++V + D P P YE+ LA GD F+W+ PK +
Sbjct: 133 AAIARMKGKGPQIVEVAD---------PQAGYPATGRYLEYEDFLASGDEDFNWIMPKDE 183
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
+ + LNYT GTT PKGVV ++ +++ + + + W +P Q+ L +P+FH N W+ +
Sbjct: 184 WESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTAVSWPMPHQARYLTIVPLFHCNNWNHS 243
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL-SSSPEAKQ-LDRPVRI 306
W +VG VC R A ++ I GVTHM GAPIVLN++ ++ PE ++ D V+
Sbjct: 244 WMMPLVGGCVVCCRDITARAIYDAIADDGVTHMGGAPIVLNMIVNAKPEDRRAFDHIVQT 303
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
TAG+PPPA L E LGF V+ YG TE G C W +W+ ER ++KAR G
Sbjct: 304 YTAGAPPPAATLRAIEPLGFSVTQVYGLTETYGHVTECTWHARWDGEEDEERYAIKARTG 363
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
V + ++ +DPET V DG T+GEI++RG ++M GYLK+PEAT + K G +++G
Sbjct: 364 VLMPMMEDITALDPETMKQVPMDGATQGEIMIRGNAVMKGYLKNPEATKEAFKGGYFHSG 423
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+ HPDGYL+I DR+KD+IISGGENISS E+E VL HP V AVV +PD W E+P
Sbjct: 424 DIAFQHPDGYLKIADRAKDIIISGGENISSIEVEGVLMKHPEVLLCAVVAKPDDKWGEVP 483
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546
CAFV LK G + E II + R R+ + PK V F ELPKT+TGK+QK+ L
Sbjct: 484 CAFVELKEGA-----VCDEAAIIAFARERLAGFKTPKQVRF-QELPKTSTGKIQKFELRK 537
Query: 547 IA 548
IA
Sbjct: 538 IA 539
>gi|319784839|ref|YP_004144315.1| AMP-dependent synthetase and ligase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170727|gb|ADV14265.1| AMP-dependent synthetase and ligase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 546
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/549 (42%), Positives = 331/549 (60%), Gaps = 14/549 (2%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PLTPL ++ERAA D +II+ + ++R L+LAS+L GI
Sbjct: 9 LDKNAANHQPLTPLTYLERAAKTYPDHIAIIHGRQRIDYRTFWQRSLKLASALQKRGIGK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ N P M E HF VPM+ A+ +++NTRLDA I+ L H+E+K++ VD S
Sbjct: 69 GDTVTVMLSNTPPMLEAHFGVPMTKAVLHSLNTRLDAAVIAFQLDHAETKVLIVDREFSG 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + L ++ LV+ DD E ++ + P P+ +D YE +A GD F+W
Sbjct: 129 VVKQALEL----ARVKPLVIDYDDPEYAADA-PYPKGERVGSLD-YEAFVAGGDADFAWS 182
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++A + I + K +V LWTLPMFH N
Sbjct: 183 MPDDEWDAISLNYTSGTTGNPKGVVYHHRGAALMAYTNTIHAGMAKHAVYLWTLPMFHCN 242
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLD 301
GW F W AV T+VCLR ++ I GVTH+CGAP+V+++L + + +
Sbjct: 243 GWCFPWTLAVQAGTHVCLRWVRPKPIYDAIADQGVTHLCGAPVVMSVLINARDEDKRAFP 302
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+ V TA +PPP VL GF V+H YG TE G V W W+ L ER++
Sbjct: 303 QTVTFNTAAAPPPEAVLSGMADAGFAVTHLYGLTETYGPAVVNEWHGAWDDLEKGERSAR 362
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L + ++DPET + DG+T GE++ RG +M GYLK+ +A+ + G
Sbjct: 363 KARQGVRYAALEGLTVMDPETMRTTPADGETIGEVMFRGNIVMKGYLKNRKASDEAFAGG 422
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G+MHPDGY+++KDRSKD+IISGGENISS E+E LY HP V VV RPD
Sbjct: 423 WFHSGDLGVMHPDGYIQLKDRSKDIIISGGENISSIEVEDALYKHPSVASCGVVARPDDK 482
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+P A+V LK G + TE +II +CRA + R+ VPK V+F E+PKT+TGK+QK
Sbjct: 483 WGEVPVAYVELKPGK-----VATEAEIIDHCRALLARFKVPKAVIFA-EIPKTSTGKIQK 536
Query: 542 YVLGDIANS 550
+ L ++A
Sbjct: 537 FRLREMAKG 545
>gi|149915939|ref|ZP_01904463.1| AMP-dependent synthetase and ligase [Roseobacter sp. AzwK-3b]
gi|149810262|gb|EDM70108.1| AMP-dependent synthetase and ligase [Roseobacter sp. AzwK-3b]
Length = 542
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/545 (41%), Positives = 328/545 (60%), Gaps = 19/545 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN LTPL ++RAA D +++Y T+++ + RC +LAS+L G+ PG VV+
Sbjct: 15 ANFVALTPLSHLQRAARLFPDHEAVVYRGFRKTYAEYHDRCTRLASALVKLGVTPGDVVA 74
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PN+PA E HF VP GA+ NTINTRL+A TI+ IL H +K++ VD + E
Sbjct: 75 TLLPNLPAHAEAHFGVPACGAVLNTINTRLEADTIAYILDHGGAKVLLVDPQFLPVAAEA 134
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
+ + P ++ + DD+ + + YE +LA GDP F W+ P+ +
Sbjct: 135 IDMMD--GPAPTVIEVADDQAGAHAHG---------HYMEYEELLASGDPAFEWIMPEDE 183
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
+ + LNYT GTT PKGVV ++ +++ + + I W +P+ + L +P+FH N W+ T
Sbjct: 184 WESLALNYTSGTTGRPKGVVCHHRGAYLMTMGTAISWPMPRHARYLTIVPLFHCNNWNHT 243
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAKQ-LDRPVRI 306
W +VG T +C R A ++ I GVTH APIVLN ++++ PE ++ D V +
Sbjct: 244 WMMPMVGGTVICCRDITASAIYDAIADEGVTHFGAAPIVLNTIVNAKPEDRRDFDHVVEV 303
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
TAG+PPPA L E LGF V+ YG TE G C W+ +W+ L +R ++KAR G
Sbjct: 304 FTAGAPPPAATLRAIEPLGFQVTQVYGLTETYGHVTECLWQTRWDGLADDDRYAIKARTG 363
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
V + ++ +DPET + DG T+GEI++RG ++M GYLK+P+AT + + G +++G
Sbjct: 364 VLMPMMEDITAMDPETMIQTPMDGTTQGEIMIRGNAVMKGYLKNPKATEEAFRGGYFHSG 423
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+ + HPDGYL+I DR+KD+IISGGENISS E+E VL HP V AVV +PD W E+P
Sbjct: 424 DIAVQHPDGYLQIADRAKDIIISGGENISSVEVEGVLMMHPAVLLCAVVAKPDEKWGEVP 483
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546
CAFV +K G D TTE ++I + R R+ + PK V F ELPKT+TGK+QK+ L
Sbjct: 484 CAFVEIKDGAD-----TTEAELIAFARHRLAGFKTPKRVEF-RELPKTSTGKIQKFELRK 537
Query: 547 IANSM 551
+A +
Sbjct: 538 LAREL 542
>gi|209517804|ref|ZP_03266639.1| AMP-dependent synthetase and ligase [Burkholderia sp. H160]
gi|209501750|gb|EEA01771.1| AMP-dependent synthetase and ligase [Burkholderia sp. H160]
Length = 544
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/543 (43%), Positives = 320/543 (58%), Gaps = 20/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ F+ RAA + +I++ + W +TY R +LAS+L GI
Sbjct: 10 LARREANYVPLTPIDFLVRAAQVYGERLAIVHGEIRRNWRETYERARRLASALQEAGIGR 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIP M E HF VPM+GA+ NT+NTRLD T+ +L+H E+K + VD
Sbjct: 70 GDTVAALLPNIPPMVEAHFGVPMAGAVLNTLNTRLDVATLLFMLRHGEAKALIVDTEYGE 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
FP D + IS + + P YE + GDP F W
Sbjct: 130 FAHSAALEFP------------DLRVISVADAQPADAAQFIRATDYEAFVQTGDPCFEWT 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPMFH N
Sbjct: 178 PPADEWDAIALNYTSGTTGDPKGVVYHHRGAYLNALSNILEWDMPKHAVYLWTLPMFHCN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW F W A NVCLRKFDA TVF LIR+ +TH CGAPIV + L+++P + +
Sbjct: 238 GWCFPWTVAARAGVNVCLRKFDAKTVFELIRRERITHYCGAPIVQSSLANAPAEWREGIT 297
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V + AG+ PP V+ + + +GF ++H YG TE G CA + +W+ L + RA L
Sbjct: 298 HRVSTMVAGAAPPPAVIAKMKQIGFDLTHVYGLTETYGPAAVCAKQDEWDALDDQTRADL 357
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGVR V ++D +T V DG+T GEI+ RG M GYLK+ AT K G
Sbjct: 358 TARQGVRYHLQAAVAVLDADTLAPVPDDGETIGEIMFRGNICMKGYLKNERATEAAFKGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G+ DGY+ I+DRSKD+IISGGENISS E+E LY HP V+ AAVV PDP
Sbjct: 418 WFHTGDLGVRTADGYIRIRDRSKDIIISGGENISSIEVEDTLYRHPAVSVAAVVAMPDPK 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAF+ LK G TE++II +CR + Y +PK V F ELPKT+TGK+QK
Sbjct: 478 WGEVPCAFIELKEGA-----QVTEEEIIAHCRLFLAGYKLPKAVRF-GELPKTSTGKIQK 531
Query: 542 YVL 544
+ L
Sbjct: 532 FEL 534
>gi|124383087|ref|YP_001023964.1| acyl-CoA synthetase [Burkholderia mallei NCTC 10229]
gi|126446078|ref|YP_001078658.1| acyl-CoA synthetase [Burkholderia mallei NCTC 10247]
gi|254356608|ref|ZP_04972883.1| AMP-binding enzyme [Burkholderia mallei 2002721280]
gi|124291107|gb|ABN00377.1| AMP-binding domain protein [Burkholderia mallei NCTC 10229]
gi|126238932|gb|ABO02044.1| AMP-binding enzyme [Burkholderia mallei NCTC 10247]
gi|148025635|gb|EDK83758.1| AMP-binding enzyme [Burkholderia mallei 2002721280]
Length = 553
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 244/547 (44%), Positives = 329/547 (60%), Gaps = 28/547 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ FI RAA + + ++ + TWS+TY R +LAS+L G+
Sbjct: 9 LGRREANYVPLTPIDFIARAAEVYGERLAAVHGEIRRTWSETYARARRLASALERAGVGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----H 119
G V+ + PNIPAM E HF VPM+GA+ N +NTRLD ++ +L+H E+K++ VD
Sbjct: 69 GDTVAALLPNIPAMIEAHFGVPMAGAVLNALNTRLDVASMLFMLRHGEAKVLIVDTEYAE 128
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ LEV L +V + D + + P R P A +D YE LA GDP
Sbjct: 129 FAHRAALEVPGL--------AIVSVAD-----AMPADPARFPAA--LD-YEAFLAGGDPA 172
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
++W P + + + LNYT GTT PKGVV ++ ++ A+ +L++W +PK +V LWTLPM
Sbjct: 173 YAWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNLLEWDMPKHAVYLWTLPM 232
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A NVCLRKFDA V LIR+ VTH GAPIV + ++++P +
Sbjct: 233 FHCNGWCFPWAVAARAGVNVCLRKFDAKRVLELIRRERVTHYSGAPIVQSAIANAPAEWR 292
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
+ V AG+ P V+ + + +GF ++H YG TE+ G CA + W LP E
Sbjct: 293 AGIAHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAKQAHWASLPDDE 352
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
A L ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+P AT +
Sbjct: 353 LAQLNARQGVRYHLQAGATVLDPDTMAPVPADGETLGEIMFRGNLCMKGYLKNPHATDEA 412
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV
Sbjct: 413 FAGGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVEVAAVVAL 472
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PDP W E+PCAFV L+ GM TE++II +CR + Y +PKTV F ELPKT+TG
Sbjct: 473 PDPKWGEVPCAFVELRD-----GMSATEEEIIAHCRLLLAAYKIPKTVRF-GELPKTSTG 526
Query: 538 KVQKYVL 544
K+QK+ L
Sbjct: 527 KIQKFQL 533
>gi|254183102|ref|ZP_04889694.1| AMP-binding enzyme [Burkholderia pseudomallei 1655]
gi|184213635|gb|EDU10678.1| AMP-binding enzyme [Burkholderia pseudomallei 1655]
Length = 553
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 244/547 (44%), Positives = 329/547 (60%), Gaps = 28/547 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ FI RAA + ++++ + TWS+TY R +LAS+L G+
Sbjct: 9 LGRREANYVPLTPIDFIARAAEVYGERLAVVHGEIRRTWSETYARARRLASALERAGVGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----H 119
G V+ + PNIPAM E HF VPM+GA+ N +NTRLD ++ +L+H E+K++ VD
Sbjct: 69 GDTVAALLPNIPAMIEAHFGVPMAGAVLNALNTRLDVASMLFMLRHGEAKVLIVDTEYAE 128
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ LEV L +V + D + + P R P A +D YE LA GDP
Sbjct: 129 FAHRAALEVPGL--------AIVSVAD-----AMPADPARFPAA--LD-YEAFLAGGDPA 172
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
+ W P + + + LNYT GTT PKGVV ++ ++ A+ +L++W +PK +V LWTLPM
Sbjct: 173 YVWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNLLEWDMPKHAVYLWTLPM 232
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A NVCLRKFDA V LIR+ VTH GAPIV + ++++P +
Sbjct: 233 FHCNGWCFPWAVAARAGVNVCLRKFDAKRVLELIRRERVTHYSGAPIVQSAIANAPAEWR 292
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
+ V AG+ P V+ + + +GF ++H YG TE+ G CA + W LP E
Sbjct: 293 AGIAHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAKQAHWASLPDDE 352
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
A L ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+P AT +
Sbjct: 353 LAQLNARQGVRYHLQAGATVLDPDTMAPVPADGETLGEIMFRGNLCMKGYLKNPHATDEA 412
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV
Sbjct: 413 FAGGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVAL 472
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PDP W E+PCAFV L+ GM TE++II +CR + Y +PKTV F ELPKT+TG
Sbjct: 473 PDPKWGEVPCAFVELRD-----GMSATEEEIIAHCRLLLAAYKIPKTVRF-GELPKTSTG 526
Query: 538 KVQKYVL 544
K+QK+ L
Sbjct: 527 KIQKFQL 533
>gi|444356174|ref|ZP_21157875.1| long-chain-fatty-acid--CoA ligase [Burkholderia cenocepacia BC7]
gi|444368565|ref|ZP_21168404.1| long-chain-fatty-acid--CoA ligase [Burkholderia cenocepacia
K56-2Valvano]
gi|443600680|gb|ELT68857.1| long-chain-fatty-acid--CoA ligase [Burkholderia cenocepacia
K56-2Valvano]
gi|443607535|gb|ELT75224.1| long-chain-fatty-acid--CoA ligase [Burkholderia cenocepacia BC7]
Length = 647
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/542 (44%), Positives = 330/542 (60%), Gaps = 28/542 (5%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTP+ F+ RAA + +I++ D TW +T R QLAS+L+ G+ G V+
Sbjct: 111 ANYVPLTPIDFLIRAAEVYGERLAIVHGDVRRTWGETCTRAKQLASALAQAGVGRGDTVA 170
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----HLSSSL 124
+ PNIPAM E HF VPM+GA+ NTINTRLD ++ +L+H E+K++ VD ++
Sbjct: 171 ALLPNIPAMVEAHFGVPMAGAVLNTINTRLDVSSVLFMLRHGEAKVLIVDTEYAEVAQRA 230
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
LEV L K+V + D + + P R A YE +A GDP ++W
Sbjct: 231 ALEVPGL--------KIVSVAD-----ALPADPDRFAGAT---DYETFVAGGDPDYAWTP 274
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
P + + + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPMFH NG
Sbjct: 275 PADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHAVYLWTLPMFHCNG 334
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDR 302
W F W A NVCLRKFDA TV LIR+ +TH CGAPIV + ++++P + +D
Sbjct: 335 WCFPWAVAARAGVNVCLRKFDAKTVLDLIRRERITHYCGAPIVQSAIANAPAEFRAGIDH 394
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
V + AG+ P V+ + + +GF + H YG TE+ G CA + W+ + ERA L
Sbjct: 395 TVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAKQSHWDAVSDEERARLN 454
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+P+AT + G
Sbjct: 455 ARQGVRYHLEAGATVLDPDTMTPVPADGETLGEIMFRGNICMKGYLKNPKATDEAFHGGW 514
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
++TGD+ ++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV PDP W
Sbjct: 515 FHTGDLAVLMPDGYIRIKDRKKDIIISGGENISSIEVEDALYRHPAVAVAAVVAMPDPKW 574
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E+PCAFV L+ G + TE +I+ +CR + + VPK V F ELPKT+TGK+QK+
Sbjct: 575 GEVPCAFVELREGASA-----TEAEIVAHCRQLLAGFKVPKAVRF-GELPKTSTGKIQKF 628
Query: 543 VL 544
L
Sbjct: 629 QL 630
>gi|293604779|ref|ZP_06687178.1| acyl-CoA synthetase [Achromobacter piechaudii ATCC 43553]
gi|292816830|gb|EFF75912.1| acyl-CoA synthetase [Achromobacter piechaudii ATCC 43553]
Length = 571
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/538 (45%), Positives = 321/538 (59%), Gaps = 21/538 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN LTP+ FI RAA +++ TW QTY R +LA++L GI G V+
Sbjct: 14 ANYTALTPVDFIARAAEVYGQRLAVVRGKVRRTWGQTYERAQRLANALERAGIQRGDTVA 73
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
V+ PNIPAM E HF VPM GA+ NT+NTRLDA ++ +L H E++ + VD + +
Sbjct: 74 VMLPNIPAMVEAHFGVPMLGAVLNTLNTRLDAPSVLFMLGHGEARALIVDTEFADIAQRA 133
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
+ FP L +I+ + S P +P A VD YE LA P ++W P +
Sbjct: 134 RAEFP------HLRIIS----VHDLDSAPATLPGA--VD-YEAFLADASPHYAWQPPADE 180
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + LNYT GTT PKGVV Y+ ++ AV ++++W +PK +V LWTLPMFH NGW F
Sbjct: 181 WDAIALNYTSGTTGDPKGVVYHYRGAYLNAVSNILEWDMPKHAVYLWTLPMFHCNGWCFP 240
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDRPVRI 306
W A NVCLRKFD TVF LIR GVTH CGAPIV + L+++P + + VR
Sbjct: 241 WTVAARAGVNVCLRKFDPQTVFDLIRAEGVTHYCGAPIVQSALANAPADMRAGITHTVRT 300
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
+ AG+ P V+ + +GF ++H YG TE+ G CA + W+ L RA L ARQG
Sbjct: 301 MVAGAAPAPAVIAKMREIGFELTHVYGLTEVYGPAAVCARQESWDALDDERRAQLTARQG 360
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
VR V + +PET V D QT GEI+ RG M GYLK+ AT + G ++TG
Sbjct: 361 VRYHLQAGVSVRNPETMQQVPADEQTVGEIMFRGNICMKGYLKNERATDEAFAGGWFHTG 420
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+G+M PDGY+ IKDRSKD+IISGGENISS E+E LY HP V AVV PDP W E P
Sbjct: 421 DLGVMTPDGYVRIKDRSKDIIISGGENISSIEVEDALYRHPAVAAVAVVAMPDPKWGETP 480
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
CAFV LK G + T ++II +C+ +P + VP+ V F ELPKT+TGK+QK+ L
Sbjct: 481 CAFVELKAGASA-----TAEEIIAHCKLLLPGFKVPRAVRF-GELPKTSTGKIQKFEL 532
>gi|206563275|ref|YP_002234038.1| acyl-CoA synthetase [Burkholderia cenocepacia J2315]
gi|198039315|emb|CAR55280.1| putative AMP-binding enzyme [Burkholderia cenocepacia J2315]
Length = 550
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/542 (44%), Positives = 330/542 (60%), Gaps = 28/542 (5%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTP+ F+ RAA + +I++ D TW +T R QLAS+L+ G+ G V+
Sbjct: 14 ANYVPLTPIDFLIRAAEVYGERLAIVHGDVRRTWGETCTRAKQLASALAQAGVGRGDTVA 73
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----HLSSSL 124
+ PNIPAM E HF VPM+GA+ NTINTRLD ++ +L+H E+K++ VD ++
Sbjct: 74 ALLPNIPAMVEAHFGVPMAGAVLNTINTRLDVSSVLFMLRHGEAKVLIVDTEYAEVAQRA 133
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
LEV L K+V + D + + P R A YE +A GDP ++W
Sbjct: 134 ALEVPGL--------KIVSVAD-----ALPADPDRFAGAT---DYETFVAGGDPDYAWTP 177
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
P + + + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPMFH NG
Sbjct: 178 PADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHAVYLWTLPMFHCNG 237
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDR 302
W F W A NVCLRKFDA TV LIR+ +TH CGAPIV + ++++P + +D
Sbjct: 238 WCFPWAVAARAGVNVCLRKFDAKTVLDLIRRERITHYCGAPIVQSAIANAPAEFRAGIDH 297
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
V + AG+ P V+ + + +GF + H YG TE+ G CA + W+ + ERA L
Sbjct: 298 TVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAKQSHWDAVSDEERARLN 357
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+P+AT + G
Sbjct: 358 ARQGVRYHLEAGATVLDPDTMTPVPADGETLGEIMFRGNICMKGYLKNPKATDEAFHGGW 417
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
++TGD+ ++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV PDP W
Sbjct: 418 FHTGDLAVLMPDGYIRIKDRKKDIIISGGENISSIEVEDALYRHPAVAVAAVVAMPDPKW 477
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E+PCAFV L+ G + TE +I+ +CR + + VPK V F ELPKT+TGK+QK+
Sbjct: 478 GEVPCAFVELREGASA-----TEAEIVAHCRQLLAGFKVPKAVRF-GELPKTSTGKIQKF 531
Query: 543 VL 544
L
Sbjct: 532 QL 533
>gi|433776462|ref|YP_007306929.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mesorhizobium
australicum WSM2073]
gi|433668477|gb|AGB47553.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mesorhizobium
australicum WSM2073]
Length = 546
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/548 (42%), Positives = 328/548 (59%), Gaps = 14/548 (2%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PLTPL ++ERAA D ++I+ ++ +RR L+LAS+L GI
Sbjct: 9 LDRNAANHQPLTPLTYLERAARTYPDHVAVIHGSQRISYRDFWRRSLKLASALHKHGIGK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ N P M E HF VPM+ A+ +++NTRLDA I+ L H+E+K++ VD S
Sbjct: 69 GDTVTVMLSNTPPMLEAHFGVPMTKAVLHSLNTRLDAAVIAFQLDHAETKVLIVDREFSG 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ E + L + LV+ DD E ++ + P P+ VD YE +A GD F+W
Sbjct: 129 VVREALGL----AVVKPLVIDYDDPEYATDA-PYPKGERVGTVD-YEAFVANGDEAFAWS 182
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++A + I + K +V LWTLPMFH N
Sbjct: 183 MPDDEWDAISLNYTSGTTGNPKGVVYHHRGAALMAYTNTIHAGMAKHAVYLWTLPMFHCN 242
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLD 301
GW F W AV T+VCLR ++ I +GVTH+CGAP+V+++L + + +
Sbjct: 243 GWCFPWTLAVQAGTHVCLRWVRPKPIYDAIADYGVTHLCGAPVVMSVLINAKDEDKRAFA 302
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+ V TA +PPP VL GF V+H YG TE G V W W+ L RA
Sbjct: 303 QTVTFNTAAAPPPEAVLSGMADAGFAVTHLYGLTETYGPAVVNEWHNGWDALDKGARAGK 362
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L + ++DPET DG+T GE++ RG +M GYLK+ AT + G
Sbjct: 363 KARQGVRYAALEGLTVMDPETMAETPADGETIGEVMFRGNIVMKGYLKNRRATDEAFGGG 422
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G+MHPDGY+++KDRSKD+IISGGENISS E+E LY HP V VV R D
Sbjct: 423 WFHSGDLGVMHPDGYIQLKDRSKDIIISGGENISSIEVEEALYKHPAVASCGVVARHDDK 482
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+P A+V LK G ++ +E +II++CR + R+ VPK V+F E+PKT+TGK+QK
Sbjct: 483 WGEVPVAYVELKPGKEA-----SEAEIIEHCRTLLARFKVPKAVIFA-EIPKTSTGKIQK 536
Query: 542 YVLGDIAN 549
+ L ++A
Sbjct: 537 FRLREMAK 544
>gi|170747920|ref|YP_001754180.1| AMP-dependent synthetase and ligase [Methylobacterium radiotolerans
JCM 2831]
gi|170654442|gb|ACB23497.1| AMP-dependent synthetase and ligase [Methylobacterium radiotolerans
JCM 2831]
Length = 545
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/555 (44%), Positives = 339/555 (61%), Gaps = 28/555 (5%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
+DR+ PAN PLTPL +++RAA D ++++ ++ + Y R +LA++L++ G
Sbjct: 11 LDRV---PANHQPLTPLLYLDRAARVFPDHVAVVHGPLRRSYREVYARARRLAAALAARG 67
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH- 119
I G V+ + N P M E H+ VPM+GA+ NT+NTRLDA I L+H E+ ++ D
Sbjct: 68 IGRGDTVAALLANTPEMIECHYGVPMTGAVLNTLNTRLDADAIRFCLQHGEAAVLITDRE 127
Query: 120 --LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD 177
+++ LE ++ P V+ DD E P R+ D YE LA GD
Sbjct: 128 FSRTAAAALEGLATKP-------FVIDVDDPEYDG---PGARLGATD----YEAFLAGGD 173
Query: 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
P+ W P + D + LNYT GTT PKGVV ++ ++A+ ++I + + V LWTL
Sbjct: 174 PEHDWRLPDDEWDAITLNYTSGTTGDPKGVVYHHRGAALLALGNVITGGLGQHPVYLWTL 233
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
PMFH NGW F W ++V T+VCLR+ A ++ L+ +HGVTH+CGAPIV+ +L ++P+A
Sbjct: 234 PMFHCNGWCFPWTLSIVAGTHVCLRQVRAEAMYRLMAEHGVTHLCGAPIVMQMLINAPDA 293
Query: 298 KQLDRPVRI--LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
++ D P R+ TA +PPP VL GF V+H YG TE G V AW W+ L A
Sbjct: 294 ERRDLPRRVAFFTAAAPPPEAVLAGMSEAGFDVTHLYGLTESYGPAVVNAWHADWDALAA 353
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
+RA+ KARQGVR L +D+ DPET V DG T GE++MRG +M GYLK+P AT
Sbjct: 354 DQRAAKKARQGVRYPVLEALDVRDPETLEPVPADGATIGEVMMRGNVVMRGYLKNPAATR 413
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
G + TGD+G+ HPDGY+++KDRSKD+IISGGENISS E+E L+ HP V AAVV
Sbjct: 414 AAFAGGWFRTGDLGVKHPDGYVQLKDRSKDIIISGGENISSIEVEDALFKHPAVAAAAVV 473
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
RPD W E PCAFV LK G T ++IQ+CR R+ Y +P+ V+F ELPKT+
Sbjct: 474 ARPDAKWGETPCAFVELKAGA-----APTADELIQWCRGRLASYKLPRHVIF-GELPKTS 527
Query: 536 TGKVQKYVLGDIANS 550
TGKVQK++L + A
Sbjct: 528 TGKVQKFILRERARQ 542
>gi|187921400|ref|YP_001890432.1| acyl-CoA synthetase [Burkholderia phytofirmans PsJN]
gi|187719838|gb|ACD21061.1| AMP-dependent synthetase and ligase [Burkholderia phytofirmans
PsJN]
Length = 543
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/545 (43%), Positives = 327/545 (60%), Gaps = 24/545 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN PLTP+ FI RAA + P++++ + W +TY R +LAS+L GI
Sbjct: 9 LERREANYVPLTPIDFIVRAAEVYGERPAVVHGEIRRNWRETYERARRLASALQQAGIQR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIP M E HF VPM+GA+ NT+NTRLD ++ +L+H E+K + VD
Sbjct: 69 GDTVAALLPNIPPMIEAHFGVPMAGAVLNTLNTRLDVSSLLFMLRHGEAKALIVDTEYGE 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQFS 181
FP D + IS + + P P+ F+ YE L GDP+F+
Sbjct: 129 FAHRAALEFP------------DLRVISVADAMPA--DPSQFIRATDYEAFLQSGDPEFA 174
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + D + LNYT GTT PKGVV ++ ++ A+ ++++W +PK ++ LWTLP+FH
Sbjct: 175 WAMPADEWDAIALNYTSGTTGDPKGVVYHHRGAYLNALSNILEWDMPKHAIYLWTLPLFH 234
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQ 299
NGW F W A NVCLRKFDA TVF LIR+ G+TH CGAPIV + L+++P +
Sbjct: 235 CNGWCFPWTVAARAGVNVCLRKFDAKTVFDLIRREGITHYCGAPIVQSALANAPAQWREG 294
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
++ V + AG+ P V+ + + +GF ++H YG TE G CA + +W L RA
Sbjct: 295 IEHRVSTMVAGAAPAPAVIAKMKEIGFDLTHVYGLTETYGPAAVCAKQEEWEALDDGARA 354
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+ ARQGVR V ++DP+T V DG+T GEI+ RG M GYLK+ AT +
Sbjct: 355 EMNARQGVRYHLQAAVTVLDPDTLTPVPDDGETIGEIMFRGNICMKGYLKNERATEATFQ 414
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+G+ PDGY+ I+DRSKD+IISGGENISS E+E LY HP V+ AAVV D
Sbjct: 415 GGWFHTGDLGVRMPDGYIRIRDRSKDIIISGGENISSIEVEDTLYRHPAVSVAAVVAMAD 474
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
P W E+PCAFV LK G + ++II +CR + Y +PK V F ELPKT+TGK+
Sbjct: 475 PKWGEVPCAFVELKEGA-----QVSAEEIIAHCRLFLAGYKLPKAVRF-GELPKTSTGKI 528
Query: 540 QKYVL 544
QK+ L
Sbjct: 529 QKFEL 533
>gi|170746513|ref|YP_001752773.1| AMP-dependent synthetase and ligase [Methylobacterium radiotolerans
JCM 2831]
gi|170653035|gb|ACB22090.1| AMP-dependent synthetase and ligase [Methylobacterium radiotolerans
JCM 2831]
Length = 550
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/550 (43%), Positives = 332/550 (60%), Gaps = 24/550 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ + RAA A ++I D T++ Y RC +LA+ L++ GI P
Sbjct: 23 LARRAANYVPLTPVSLLARAAAAAGARTAVIDGDRRLTYADLYARCRRLAAGLAARGIGP 82
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V+++APN+P M E HFAVPM GA+ N +NTRLDA TI+ L+H ++ + V+ +
Sbjct: 83 LDTVAILAPNVPEMIEAHFAVPMLGAVLNPLNTRLDAATIAFSLRHGGARALLVE----A 138
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ + P LV+ D I + S Y ++LA+GDP ++W
Sbjct: 139 EYAGLAARALADLAEPILVVAIGDSGIDGALS-------------YGDLLAEGDPDYAWA 185
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + L YT GTT PKG V ++ ++ A+ + + + + +SV LWTLPMFH +
Sbjct: 186 GPEDEWQSLCLLYTSGTTGDPKGAVYSHRGGYLQALGNAVTFGLTGESVYLWTLPMFHCS 245
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GWS+ W + AT VCLRK + +F LI +HGVTH+CGAPIVL++++ +P ++ P
Sbjct: 246 GWSYPWASVAACATQVCLRKVEPAAIFRLIAEHGVTHLCGAPIVLSMIAHAPAQDRVPFP 305
Query: 304 VRILTA-GSPPPAPVLLRT-ESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R+ A G P+ ++RT E LGF V+H YG TE G C +P W LP ER +
Sbjct: 306 QRVRCAVGGAAPSSTIIRTMEELGFQVTHLYGATESYGPATVCLAQPDWTDLPDTERYAR 365
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGV L V + D T + V RDG T GEI +RG ++M GYL +P AT + DG
Sbjct: 366 MARQGVPLATLEAVSVADTATDVPVPRDGTTVGEIRLRGNTVMKGYLGNPGATEAALADG 425
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
Y TGD+ + HPDG +EIKDR+KD+IISGGENISS E+E VL HP V AAVV RPDP
Sbjct: 426 WYRTGDLAVWHPDGSVEIKDRAKDIIISGGENISSLEVEEVLMRHPAVMLAAVVARPDPT 485
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF+ +K GT + +E+++I +CR + R+ VPKTVVF LPKT+TGK+QK
Sbjct: 486 WGESPCAFLEVKPGTS----VPSEQELIAFCREHMARFKVPKTVVF-GPLPKTSTGKIQK 540
Query: 542 YVLGDIANSM 551
+VL + A +
Sbjct: 541 FVLREQARDL 550
>gi|357025492|ref|ZP_09087615.1| AMP-dependent synthetase and ligase [Mesorhizobium amorphae
CCNWGS0123]
gi|355542620|gb|EHH11773.1| AMP-dependent synthetase and ligase [Mesorhizobium amorphae
CCNWGS0123]
Length = 546
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/551 (42%), Positives = 328/551 (59%), Gaps = 18/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PLTPL ++ERAA D +II+ + +RR L+LAS+LS GI
Sbjct: 9 LDRNAANHQPLTPLTYLERAARTYPDHVAIIHGSQRIAYRDFWRRSLKLASALSKRGIGK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ N P M E HF VPM+ A+ +++NTRLDA I+ + H+E+K++ VD S
Sbjct: 69 GDTVTVMLSNTPPMLEAHFGVPMTKAVLHSLNTRLDAAVIAFQIDHAETKVLIVDREFSG 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPP--PRIPPADFVDTYENMLAKGDPQFS 181
++ E ++ +K L++ DD E ++ + P RI D YE +A GD F+
Sbjct: 129 VMKEALA----QAKARPLIIDYDDLEYATDAPYPKGERIGSLD----YEAFVAGGDEDFT 180
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + D + LNYT GTT PKGVV ++ ++A + I + K +V LWTLPMFH
Sbjct: 181 WAMPDDEWDAISLNYTSGTTGNPKGVVYHHRGAALMAYTNTIHAGMAKHAVYLWTLPMFH 240
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQ 299
NGW F W AV T+VCLR ++ I HGVTH+CGAPIV+++L + + +Q
Sbjct: 241 CNGWCFPWTLAVQAGTHVCLRWVRPKPIYDAIADHGVTHLCGAPIVMSVLINAKDEDKRQ 300
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+ V TA +PPP VL GF V+H YG TE G V W +W+ L R
Sbjct: 301 FPQMVTFNTAAAPPPEAVLSGMADAGFAVTHLYGLTETYGPAVVNEWHNEWDGLEKGPRT 360
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+ KARQGVR L + +++PET DG+T GE++ RG +M GYLK+ +AT +
Sbjct: 361 AKKARQGVRYAALEGLTVMNPETMTETPADGETIGEVMFRGNIVMKGYLKNRKATDEAFA 420
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+G+MH DGY+++KDRSKD+IISGGENISS E+E LY HP V VV R D
Sbjct: 421 GGWFHSGDLGVMHADGYIQLKDRSKDIIISGGENISSIEVEDALYKHPAVASCGVVARAD 480
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+P A+V LK + TE +II +CRA + R+ VPK VVF E+PKT+TGK+
Sbjct: 481 DKWGEVPVAYVELKPAKTA-----TEAEIIDHCRALLARFKVPKAVVFA-EIPKTSTGKI 534
Query: 540 QKYVLGDIANS 550
QK+ L ++A
Sbjct: 535 QKFRLREMAKG 545
>gi|85704594|ref|ZP_01035696.1| acyl-CoA synthase [Roseovarius sp. 217]
gi|85671002|gb|EAQ25861.1| acyl-CoA synthase [Roseovarius sp. 217]
Length = 556
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/553 (42%), Positives = 337/553 (60%), Gaps = 19/553 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PL+PL F+ERAA+ D +I++ ++ Y R QLAS+LS+ G+
Sbjct: 10 LDRTPANYQPLSPLSFLERAASVFPDHTAIVHGALRRNYADFYARSRQLASALSARGLGR 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VSV+ N PAM E H+ VPM GA+ ++INTRLDA I+ L H+ S++V VD
Sbjct: 70 GDTVSVMLANTPAMLECHYGVPMCGAVLHSINTRLDAAIIAFQLDHALSRVVIVDREFMP 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L+ + +SL +K L++ DD E S A + YE +L+ GDP F W+
Sbjct: 130 LMQDALSL----AKVTPLLIQYDDPEFSGPEF-------ATDAEDYEIVLSAGDPAFDWL 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + D + +NYT GTT PKGVV ++ +++A + + + K +V LWTLPMFH N
Sbjct: 179 MPEDEWDAISINYTSGTTGDPKGVVSHHRGAYLLAQGNALTTSMAKHAVYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W + + T+VCLR+ A ++ + + VTH+CGAPIV++L+ S+PE + LD
Sbjct: 239 GWCFPWTLSAIIGTHVCLRQVRADPIWEALAQERVTHLCGAPIVMSLMISAPETVKHPLD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+ V+ TA +PPP +L + GF V+H YG TE G V W W+ LPA ++A L
Sbjct: 299 QRVQFFTAAAPPPEKLLAEMKDAGFDVTHLYGLTETYGPAVVNDWHDAWSALPAAQQAKL 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR + L +D++DPE+ V DGQT GE++ RG +M GY ++P+AT G
Sbjct: 359 KARQGVRYLALEGLDVMDPESMTPVPCDGQTMGEVMFRGNVVMKGYFRNPQATQDAFAGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G+ HPDGY+++KDRSKDVIISGGENISS E+E LY +P V AVV P
Sbjct: 419 WFHSGDLGVRHPDGYIQLKDRSKDVIISGGENISSIEVEEALYRYPAVAVTAVVAMPHEK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV L + G + + + +CR + Y VP VF+ +P+T+TGK+QK
Sbjct: 479 WGETPCAFVEL-----TEGQVADAETLRAWCRDHLAPYKVPGHFVFL-PIPRTSTGKIQK 532
Query: 542 YVLGDIANSMSMS 554
++L A +++S
Sbjct: 533 FLLRAQAEDLALS 545
>gi|72383937|ref|YP_293291.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
gi|72123280|gb|AAZ65434.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
Length = 558
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/548 (44%), Positives = 322/548 (58%), Gaps = 19/548 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTPL F+ RA +II+ D +YTW + RC +LA +L GI
Sbjct: 9 LDQRAANYQPLTPLHFLNRAEDVYPHRIAIIHGDRSYTWKEYAGRCRKLAGALIDHGIER 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+++APN PAM E F VPM+GA+ N IN RLDA +S IL+HSE++L+FVD +
Sbjct: 69 GDTVAILAPNTPAMLEAQFGVPMAGAVLNCINIRLDAAAVSFILRHSETRLLFVDQQFAE 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ +++ P V+ D E++ S P RI YE+ LA
Sbjct: 129 VARAAIAVL----GEPITVVDITDPEVAGSR-PVGRI-------EYESFLASAPDTPDIR 176
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQS-VLLWTLPMFHN 242
P S+ D + LNYT GTT PKGVV ++ ++ A+ L++ + + V LWTLP+FH
Sbjct: 177 LPLSEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALGQLVNAELSGDAPVYLWTLPLFHC 236
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS--PEAKQL 300
NGW + W A VGAT +CLRK T++ I H VTH C AP VL+ L S P
Sbjct: 237 NGWCYAWALAAVGATQICLRKVSGATIYDAIANHDVTHFCCAPTVLSFLIESVPPSWVPP 296
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
RP+R+L+ G+ PP V R LGF V H YG TE+ GV C + W LP E
Sbjct: 297 ARPIRVLSGGASPPPAVFRRLIELGFRVQHVYGMTEMHGVATICQSQEAWQALPEEEHLV 356
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
RQGVRT+ + E+ + DP+T V RDG GEI++RG M GY K+ AT +
Sbjct: 357 HLTRQGVRTVVMNEMMVADPKTLSPVSRDGSAMGEILLRGNLAMKGYFKNASATEEAFAG 416
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G Y+TGD+ ++H DGY+EIKDRSKD+IISGGENISS E+E VLY HP V AAVV PDP
Sbjct: 417 GWYHTGDLAVVHADGYIEIKDRSKDIIISGGENISSVEVEDVLYEHPAVAGAAVVAVPDP 476
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCA V LK +GG+ +E II +CRAR+P + P+ V+F D L +TATGK+Q
Sbjct: 477 RWGEVPCAIVELKADL-AGGVNASE--IISFCRARLPGFKAPQHVIF-DSLARTATGKLQ 532
Query: 541 KYVLGDIA 548
K+ L + A
Sbjct: 533 KFKLRESA 540
>gi|99081406|ref|YP_613560.1| AMP-dependent synthetase/ligase [Ruegeria sp. TM1040]
gi|99037686|gb|ABF64298.1| AMP-dependent synthetase and ligase [Ruegeria sp. TM1040]
Length = 543
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/544 (41%), Positives = 323/544 (59%), Gaps = 21/544 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN LTPL ++RAA D P+++Y T +++Q + RC +LAS+L+ G+ P
Sbjct: 10 LERRAANYVALTPLSHLQRAAHVFADEPALVYGQTRRSYAQYHDRCTRLASALAGMGVAP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+ + PNIPA E HF VP GA+ NTIN RLD T++ I H ++K+V VD S
Sbjct: 70 GDVVATLLPNIPAQAEAHFGVPACGAVLNTINIRLDVDTVAYIFDHGQAKVVLVD--SEF 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L L + P L+ + D + ++S TYE+++A G F W+
Sbjct: 128 LPLAEAAKERLQGAGPTLIEVPDTEAGHAASGR---------YTTYEDLIAHGATDFDWI 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + + LNYT GTT PKGVV ++ +++ + +++ W + + V L +P+FH N
Sbjct: 179 MPEDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVVSWRLQLRPVYLTIVPLFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLD 301
GW+ TW V+G T VC R A ++ I GVTH GAPIVLN++ + E + D
Sbjct: 239 GWNHTWMMPVLGGTVVCCRNTTAEAIYNAIADEGVTHFGGAPIVLNMIVNAKDTERRAFD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWK-PKWNKLPARERAS 360
V + TAG+PP L + E LGF V+ YG TE G C WK W++L + RA+
Sbjct: 299 HTVEVFTAGAPPAPATLEKIERLGFHVTQVYGLTETYGHVTECLWKGDSWDELDQQGRAA 358
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
+KARQGV + + ++D + V +G +GEIVMRG S+M GYLK+PEAT +
Sbjct: 359 IKARQGVAFPMMDHITVMDADM-QQVPMNGSDQGEIVMRGNSVMKGYLKNPEATEEAFAG 417
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +++GD+ + HPDGY++I DR+KD+IISGGENISS E+E VL HP VN AAVV +PD
Sbjct: 418 GYFHSGDIAIQHPDGYIQIADRAKDIIISGGENISSVEVEGVLMGHPDVNLAAVVAKPDE 477
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV LK G D E +I + R + + PK VVF ELPKT+TGK+Q
Sbjct: 478 KWGEVPCAFVELKEGAD-----VDEASLIAFARQTLAGFKTPKAVVFC-ELPKTSTGKIQ 531
Query: 541 KYVL 544
K+ L
Sbjct: 532 KFEL 535
>gi|167616531|ref|ZP_02385162.1| acyl-CoA synthetase [Burkholderia thailandensis Bt4]
Length = 551
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/547 (44%), Positives = 329/547 (60%), Gaps = 28/547 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ FI RAA + ++++ D TW +TY R +LAS+L G+
Sbjct: 9 LGKREANYVPLTPIDFIARAAEVYGERLAVVHGDIRRTWGETYARARRLASALERAGVER 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----H 119
G V+ + PNIP M E HF VPM+GA+ + +NTRLD ++ +L+H E+K++ VD
Sbjct: 69 GDTVAALLPNIPPMIEAHFGVPMAGAVLDALNTRLDIASMLFMLRHGEAKVLIVDTEYAE 128
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ LEV L +V + D + + P R P A +D YE LA GDP
Sbjct: 129 FAHRAALEVPGL--------AIVSVAD-----AMPADPARFPAA--ID-YEAFLAGGDPT 172
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
++W P + + + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPM
Sbjct: 173 YTWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHAVYLWTLPM 232
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A NVCLRKFDA V LIR+ VTH GAPIV + ++++P +
Sbjct: 233 FHCNGWCFPWAVAARAGVNVCLRKFDAKLVLDLIRRERVTHYSGAPIVQSAIANAPAEWR 292
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++ V AG+ P V+ + + +GF ++H YG TE+ G CA + W LP E
Sbjct: 293 AGIEHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAKQAHWASLPDDE 352
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
A L ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+P AT +
Sbjct: 353 LAQLNARQGVRYHLQAGATVLDPDTMAPVPADGETLGEIMFRGNICMKGYLKNPHATDEA 412
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV
Sbjct: 413 FAGGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVAL 472
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PDP W E+PCAFV L+ GM TE++II +CR + Y +PKTV F ELPKT+TG
Sbjct: 473 PDPKWGEVPCAFVELRE-----GMSATEEEIIAHCRLLLAAYKIPKTVRF-GELPKTSTG 526
Query: 538 KVQKYVL 544
K+QK+ L
Sbjct: 527 KIQKFQL 533
>gi|83717079|ref|YP_439880.1| acyl-CoA synthetase [Burkholderia thailandensis E264]
gi|257143038|ref|ZP_05591300.1| acyl-CoA synthetase [Burkholderia thailandensis E264]
gi|83650904|gb|ABC34968.1| AMP-binding domain protein [Burkholderia thailandensis E264]
Length = 553
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/547 (44%), Positives = 329/547 (60%), Gaps = 28/547 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ FI RAA + ++++ D TW +TY R +LAS+L G+
Sbjct: 9 LGKREANYVPLTPIDFIARAAEVYGERLAVVHGDIRRTWGETYARARRLASALERAGVER 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----H 119
G V+ + PNIP M E HF VPM+GA+ + +NTRLD ++ +L+H E+K++ VD
Sbjct: 69 GDTVAALLPNIPPMIEAHFGVPMAGAVLDALNTRLDIASMLFMLRHGEAKVLIVDTEYAE 128
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ LEV L +V + D + + P R P A +D YE LA GDP
Sbjct: 129 FAHRAALEVPGL--------AIVSVAD-----AMPADPARFPAA--ID-YEAFLAGGDPT 172
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
++W P + + + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPM
Sbjct: 173 YTWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHAVYLWTLPM 232
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A NVCLRKFDA V LIR+ VTH GAPIV + ++++P +
Sbjct: 233 FHCNGWCFPWAVAARAGVNVCLRKFDAKLVLDLIRRERVTHYSGAPIVQSAIANAPAEWR 292
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++ V AG+ P V+ + + +GF ++H YG TE+ G CA + W LP E
Sbjct: 293 AGIEHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAKQAHWASLPDDE 352
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
A L ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+P AT +
Sbjct: 353 LAQLNARQGVRYHLQAGATVLDPDTMAPVPADGETLGEIMFRGNICMKGYLKNPHATDEA 412
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV
Sbjct: 413 FAGGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVAL 472
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PDP W E+PCAFV L+ GM TE++II +CR + Y +PKTV F ELPKT+TG
Sbjct: 473 PDPKWGEVPCAFVELRE-----GMSATEEEIIAHCRLLLAAYKIPKTVRF-GELPKTSTG 526
Query: 538 KVQKYVL 544
K+QK+ L
Sbjct: 527 KIQKFQL 533
>gi|167578394|ref|ZP_02371268.1| acyl-CoA synthetase [Burkholderia thailandensis TXDOH]
Length = 553
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/547 (44%), Positives = 328/547 (59%), Gaps = 28/547 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ FI RAA + ++++ D TW +TY R +LAS+L G+
Sbjct: 9 LGKREANYVPLTPIDFIARAAEVYGERLAVVHGDIRRTWGETYARARRLASALERAGVER 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----H 119
G V+ + PNIP M E HF VPM+GA+ N +NTRLD ++ +L+H E+K++ VD
Sbjct: 69 GDTVAALLPNIPPMIEAHFGVPMAGAVLNALNTRLDIASMLFMLRHGEAKVLIVDTEYAE 128
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ LEV L +V + D + + P R P A +D YE LA GDP
Sbjct: 129 FAHRAALEVPGL--------AIVSVAD-----AMPADPARFPAA--ID-YEAFLAGGDPT 172
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
++W P + + + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPM
Sbjct: 173 YTWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHAVYLWTLPM 232
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A NVCLRKFDA V LIR+ VTH GAPIV + ++++P +
Sbjct: 233 FHCNGWCFPWAVAARAGVNVCLRKFDAKLVLDLIRRERVTHYSGAPIVQSAIANAPAEWR 292
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++ V AG+ P V+ + + +GF ++H YG TE+ G CA + W LP E
Sbjct: 293 AGIEHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAKQAHWASLPDDE 352
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
A L ARQGVR ++DP+T V D +T GEI+ RG M GYLK+P AT +
Sbjct: 353 LAQLNARQGVRYHLQAGATVLDPDTMAPVPADAETLGEIMFRGNICMKGYLKNPHATDEA 412
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV
Sbjct: 413 FAGGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVAL 472
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PDP W E+PCAFV L+ GM TE++II +CR + Y +PKTV F ELPKT+TG
Sbjct: 473 PDPKWGEVPCAFVELRE-----GMSATEEEIIAHCRLLLAAYKIPKTVRF-GELPKTSTG 526
Query: 538 KVQKYVL 544
K+QK+ L
Sbjct: 527 KIQKFQL 533
>gi|158423100|ref|YP_001524392.1| AMP-binding protein [Azorhizobium caulinodans ORS 571]
gi|158329989|dbj|BAF87474.1| putative AMP-binding protein [Azorhizobium caulinodans ORS 571]
Length = 541
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 245/551 (44%), Positives = 341/551 (61%), Gaps = 19/551 (3%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L NPAN PLTPLGF+ERAA+ D ++I+ T+ + Y R +LAS+L+ GI
Sbjct: 8 HLDRNPANYQPLTPLGFLERAASVFPDQVAVIHGPLRRTYRELYARTRRLASALAQRGIG 67
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G V+V+ N P M E H+ VPM GA+ NT NTRLDA ++ + H E+K++ D S
Sbjct: 68 VGDTVAVMLSNTPPMLEAHYGVPMCGAVLNTFNTRLDAAILAFTIDHGEAKVLITDREFS 127
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ +SL ++ P LV+ DD E + P R+ + YE+ +A GDP F W
Sbjct: 128 PVIKAALSLA---TRKP-LVIDYDDPEYAG---PGERLGAIE----YEDFIAAGDPDFVW 176
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P + D + LNYT GTT PKGVV ++ +++V +++ + V LWTLPMFH
Sbjct: 177 APPADEWDAISLNYTSGTTGDPKGVVYHHRGAHLLSVGNVVTCHMGPHPVYLWTLPMFHC 236
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--L 300
NGW F W +VV T+VCLR+ A ++ I H VTHMCGAPIV++ L ++PE + L
Sbjct: 237 NGWCFPWSVSVVAGTHVCLRQVRAKAIYEAIEDHKVTHMCGAPIVMSTLLNAPETDRRPL 296
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
V +TA +PPPA VL + GF V H YG TE+ G V W +W+ LP ERA+
Sbjct: 297 PHTVSFITAAAPPPAAVLAAMQEAGFNVVHVYGLTEVYGPAVVNDWHGEWDALPPAERAA 356
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
KARQGVR L +D++DP T V DG+T GE++ RG +M GY+K+P AT
Sbjct: 357 KKARQGVRYGALEALDVLDPLTMEPVPADGETIGEVMFRGNVVMKGYVKNPAATDAAFAG 416
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +++GD+G+ HPDGY+++KDRSKD+IISGGENISS E+E LY HP V+ AAVV RPD
Sbjct: 417 GWFHSGDLGVKHPDGYIQLKDRSKDIIISGGENISSIEVEDALYKHPAVSAAAVVARPDE 476
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E P AFV LK G + + +D+I +CRA + Y P+T++F +E+PKT+TGK+Q
Sbjct: 477 KWGETPLAFVELKDGAAA-----SAEDLIAHCRAHLAAYKCPRTILF-EEIPKTSTGKIQ 530
Query: 541 KYVLGDIANSM 551
K+ L ++A +
Sbjct: 531 KFKLRELAKGL 541
>gi|330820564|ref|YP_004349426.1| AMP-binding enzyme [Burkholderia gladioli BSR3]
gi|327372559|gb|AEA63914.1| AMP-binding enzyme [Burkholderia gladioli BSR3]
Length = 551
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/553 (43%), Positives = 323/553 (58%), Gaps = 24/553 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN PLTP FI RAA D ++++ + YTW + Y R +LA +L GI
Sbjct: 9 LERREANYVPLTPTDFIARAAEVYGDRLAVVHGEQRYTWREAYARARRLAGALKEAGIAH 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIP M + HF VPM+GA+ N INTRLDA ++ +L+H E+KL+ VD +
Sbjct: 69 GDTVAAMLPNIPPMLDAHFGVPMAGAVLNAINTRLDAASVLFMLRHGEAKLLIVDTEYAE 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADF--VDTYENMLAKGDPQFS 181
+ P ++V + D PA F Y+ LA GDP
Sbjct: 129 VARRAAEELP----GLRIVCVADAMPAD----------PASFGGATDYDAFLAGGDPDTP 174
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + + LNYT GTT PKGVV ++ ++ A+ +L++W +PK +V LWTLPMFH
Sbjct: 175 WAPPADEWQAIALNYTSGTTGDPKGVVYHHRGAYLAAISNLLEWDMPKHAVYLWTLPMFH 234
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A NVCLRKFD TVF LIR+ GVTH GAPIV L+++P +
Sbjct: 235 CNGWCFPWAIAARAGVNVCLRKFDPRTVFELIRREGVTHYSGAPIVHGALANAPAEWRAG 294
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
++ V AG+ P V+ + +S+GF + H YG TEI G CA + W +LP E A
Sbjct: 295 IEHRVHAQVAGAAPAPAVIAKMKSIGFDLMHVYGLTEIYGPASVCATQQHWAELPEEELA 354
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
ARQGVR ++DP+T SV DG+T GEI+ RG M GYLK+P AT +
Sbjct: 355 QRTARQGVRYHLQAGATVLDPDTMASVPADGETLGEIMFRGNICMKGYLKNPRATDEAFA 414
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV PD
Sbjct: 415 GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVALPD 474
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
P W E+PCAFV L+ GM +E +I+ +CR + Y +PK V F ELPKT+TGK+
Sbjct: 475 PKWGEVPCAFVELRE-----GMQASEAEILAHCRTLLAGYKMPKAVRF-GELPKTSTGKI 528
Query: 540 QKYVLGDIANSMS 552
QK+ L + S S
Sbjct: 529 QKFQLRTLVRSDS 541
>gi|167839301|ref|ZP_02465985.1| acyl-CoA synthetase [Burkholderia thailandensis MSMB43]
gi|424905271|ref|ZP_18328778.1| acyl-CoA synthetase [Burkholderia thailandensis MSMB43]
gi|390929665|gb|EIP87068.1| acyl-CoA synthetase [Burkholderia thailandensis MSMB43]
Length = 553
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/547 (44%), Positives = 328/547 (59%), Gaps = 28/547 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ FI RAA + ++++ D TWS+TY R +LAS+L G+
Sbjct: 9 LGKREANYVPLTPIDFIARAAEVYGERLAVVHGDIRRTWSETYARARRLASALERAGVGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----H 119
G V+ + PNIP M E HF VPM+GA+ N +NTRLD ++ +L+H E+K++ VD
Sbjct: 69 GDTVAALLPNIPQMIEAHFGVPMAGAVLNALNTRLDIASMLFMLRHGEAKVLIVDTEYAE 128
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ LEV L +V + D + + P R P A +D YE LA GDP
Sbjct: 129 FAHRAALEVPGL--------TIVSVAD-----AMPADPARFPAA--ID-YEAFLAGGDPA 172
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
+W P + + + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPM
Sbjct: 173 CTWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHAVYLWTLPM 232
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A NVCLRKFDA V LIR+ VTH GAPIV + ++++P +
Sbjct: 233 FHCNGWCFPWAVAARAGVNVCLRKFDAKLVLDLIRRERVTHYSGAPIVQSAIANAPAEWR 292
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
+ V AG+ P V+ + + +GF ++H YG TE+ G CA + W LP E
Sbjct: 293 AGIAHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAKQAHWASLPDDE 352
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
A L ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+P AT +
Sbjct: 353 LAQLNARQGVRYHLQAGATVLDPDTMAPVPADGETLGEIMFRGNICMKGYLKNPHATDEA 412
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV
Sbjct: 413 FAGGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVAL 472
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PDP W E+PCAFV L+ GM TE++II +CR + Y +P+TV F ELPKT+TG
Sbjct: 473 PDPKWGEVPCAFVELRE-----GMTATEEEIIAHCRLLLAAYKIPRTVRF-GELPKTSTG 526
Query: 538 KVQKYVL 544
K+QK+ L
Sbjct: 527 KIQKFQL 533
>gi|300024120|ref|YP_003756731.1| AMP-dependent synthetase and ligase [Hyphomicrobium denitrificans
ATCC 51888]
gi|299525941|gb|ADJ24410.1| AMP-dependent synthetase and ligase [Hyphomicrobium denitrificans
ATCC 51888]
Length = 541
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/552 (42%), Positives = 340/552 (61%), Gaps = 23/552 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PLTPL F+ R A A + +II+ T ++++ Y+RC QLAS+L++ GI P
Sbjct: 9 LDKNSANYQPLTPLSFLARTALAAPEHIAIIHGKTRVSYAEFYKRCRQLASALAARGIGP 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VSV+ N PAM E HF V M+GA+ +TINTRLDA ++ L H+++KL+ D S+
Sbjct: 69 GDTVSVMLANTPAMLEAHFGVAMTGAVLHTINTRLDAAIVAFQLDHADTKLLITDREFSA 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ S +K +++ DD E P+ A D YE ++ GDP+F+W
Sbjct: 129 TM----SAALALAKAKPIIIDYDDPEF-------PQTGEALSSDDYEAFVSSGDPEFAWR 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + + LNYT GTT PKGVV ++ ++ + I + + V LWTLPMFH N
Sbjct: 178 WPEDEWEAISLNYTSGTTGNPKGVVYHHRGAALMCYANTISTGMTRFPVYLWTLPMFHCN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW F W + T+VCLR A ++ I H VTH+ GAPIV+ L ++P ++ RP
Sbjct: 238 GWCFPWSVTMAQGTHVCLRWVRAKAMYDAIVDHKVTHLSGAPIVMATLLNTPAEEK--RP 295
Query: 304 VRILTA----GSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+ + A +PPPA V+ GF ++H YG TE G W P WN LPA +R+
Sbjct: 296 ISHVVAFNHAAAPPPAAVISAMTDAGFELTHLYGLTETYGPATINEWDPSWNDLPAPDRS 355
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+ + RQG+R + L + ++DPET V DG+T GE++ RG +M GYLK+P+AT +
Sbjct: 356 AKRIRQGIRYVALEALTVMDPETMTEVPADGETLGEVMFRGNIVMKGYLKNPKATGEAFA 415
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+G+MHPDGY+++KDRSKD+IISGGENISS E+E VLY HP V AVV +PD
Sbjct: 416 GGWFHSGDLGVMHPDGYIQLKDRSKDIIISGGENISSIEVEEVLYKHPGVAFCAVVAKPD 475
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E PCAF+ L+ G + TE++I+++CR + R+ VP+ VVF E+PKT+TGK+
Sbjct: 476 EKWGETPCAFIELRPGASA-----TEEEILEWCRQGLARFKVPRRVVFA-EVPKTSTGKI 529
Query: 540 QKYVLGDIANSM 551
QK+ L ++A +
Sbjct: 530 QKFKLREMAKDV 541
>gi|421467749|ref|ZP_15916341.1| long-chain-fatty-acid--CoA ligase [Burkholderia multivorans ATCC
BAA-247]
gi|400233292|gb|EJO62854.1| long-chain-fatty-acid--CoA ligase [Burkholderia multivorans ATCC
BAA-247]
Length = 550
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/543 (44%), Positives = 336/543 (61%), Gaps = 20/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ F+ R+A D +I++ D TW++TY R +LAS+L++ G+
Sbjct: 9 LGRREANYVPLTPIDFLVRSAEVYGDRVAIVHGDVRRTWAETYARARRLASALAAAGVGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM E HF VPM+GA+ NTINTRLDA ++ +L+H E+K++ VD +
Sbjct: 69 GETVAALLPNIPAMVEAHFGVPMAGAVLNTINTRLDAASVLFMLRHGEAKVLIVDTEYAD 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ P K+V + D + + P R A VD YE +A GDP ++W
Sbjct: 129 IAQRAALELP----ALKIVSVAD-----AMPADPARFARA--VD-YEAFVAAGDPDYAWT 176
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPMFH N
Sbjct: 177 PPADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHAVYLWTLPMFHCN 236
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW F W A NVCLRKFDA TVF LIR+ VTH CGAPIV + ++++P + +D
Sbjct: 237 GWCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERVTHYCGAPIVQSAIANAPAELREGID 296
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V + AG+ P V+ + + +GF + H YG TE+ G CA + W+ L ERA L
Sbjct: 297 HTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAKQAHWDALSDDERARL 356
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+ +AT + G
Sbjct: 357 NARQGVRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKGYLKNEKATDEAFHGG 416
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV PDP
Sbjct: 417 WFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVAMPDPK 476
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV L+ G + TE++I+ +CR + + VPK V F ELPKT+TGK+QK
Sbjct: 477 WGEVPCAFVELRDGASA-----TEEEIVAHCRQLLAGFKVPKAVRF-GELPKTSTGKIQK 530
Query: 542 YVL 544
+ L
Sbjct: 531 FQL 533
>gi|90418914|ref|ZP_01226825.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligases II [Aurantimonas
manganoxydans SI85-9A1]
gi|90336994|gb|EAS50699.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligases II [Aurantimonas
manganoxydans SI85-9A1]
Length = 543
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/545 (42%), Positives = 328/545 (60%), Gaps = 14/545 (2%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L N AN PLTPL + RAA + +II+ T+++ Y R +L S+L G+
Sbjct: 6 EHLDRNAANYQPLTPLSHLARAALVHPERVAIIHGALRRTYAEFYARSRRLGSALEKRGV 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
G V+V+ N PAM E H VPM+GA+ +INTRLDA I+ L HSE+++V VD
Sbjct: 66 RRGDTVAVMLSNTPAMLEAHHGVPMTGAVLLSINTRLDADIIAFQLDHSEARVVLVDREF 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
S ++ + + +K LV+ DD + + + P + P +D YE ++A+GDP ++
Sbjct: 126 SGVMAKALK----KAKVTPLVVDYDDPDFPADA-PVAKGPAIGSLD-YEALVAEGDPDYA 179
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + D + LNYT GTT PKGVV ++ ++ ++I + + V LWTLPMFH
Sbjct: 180 WHMPNDEWDAISLNYTSGTTGNPKGVVYHHRGAALMGYANVIASGMGRYPVYLWTLPMFH 239
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQ 299
NGW F W AV T+VCLR A +F + HGVTH+CGAP+V+ L + + + +
Sbjct: 240 CNGWCFPWTLAVQAGTHVCLRWVRARAMFDALADHGVTHLCGAPVVMATLINADAGDKRD 299
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
D+ V TA +PPP VL GF V+H YG TE G V WK +WN L RA
Sbjct: 300 FDQTVTFNTAAAPPPQSVLSGMRDAGFEVTHLYGLTETYGPAVVNEWKDEWNALDGPARA 359
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+ ARQGVR L ++ ++ ET DG+T GE++ RG +M GYLK+PEA+++ +
Sbjct: 360 AQTARQGVRYPALEDLAVMHSETMEKTPADGETIGEVMFRGNIVMRGYLKNPEASAEAFR 419
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+G++H DGY+E+KDR+KD+IISGGENISS E+E LY HP V AAVV +PD
Sbjct: 420 GGWFHSGDLGVLHEDGYIELKDRAKDIIISGGENISSIEVEDALYQHPDVATAAVVAKPD 479
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E P AFV LK G TE D+I +CR R+ R+ PK + F E+PKT+TGK+
Sbjct: 480 EKWGETPLAFVELKPGRS-----VTEADLIAHCRERLARFKCPKEIRF-QEVPKTSTGKI 533
Query: 540 QKYVL 544
QKYVL
Sbjct: 534 QKYVL 538
>gi|338999324|ref|ZP_08637974.1| AMP-dependent synthetase and ligase [Halomonas sp. TD01]
gi|338763888|gb|EGP18870.1| AMP-dependent synthetase and ligase [Halomonas sp. TD01]
Length = 544
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/555 (40%), Positives = 323/555 (58%), Gaps = 39/555 (7%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L+ AN PL+PL FI R A D +++YN++ Y+W QTY RC QLAS L+ GI
Sbjct: 9 EALEKTAANHVPLSPLSFIRRTAAVYPDRTALVYNESRYSWQQTYARCCQLASLLTHLGI 68
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
+ G V+V+ PN+PAMYE HF +PM GA+ N IN RLD ++ IL+HS S+L+ VD
Sbjct: 69 HKGDTVAVMLPNVPAMYEAHFGIPMVGAVLNAINIRLDPEAVAFILQHSRSRLLLVD--- 125
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRI----PPADFVD------TYEN 171
P+ V + + K + P P++ P+ + YE
Sbjct: 126 -----------------PEYVDVVE-KALDQLEGPAPQVINVSDPSQGEERWIGGLEYEV 167
Query: 172 MLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQS 231
+L ++ W P + D + L YT GTT PKGVV ++ ++ AV + + W +P
Sbjct: 168 LLTNQPARYDWQLPDDEWDAIALGYTSGTTGNPKGVVSHHRGAYLNAVSNALSWTLPANV 227
Query: 232 VLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL 291
+ LWTLPMFH NGW F W A +G TNVCLRK D + LI++ GVTH CGAPIV +++
Sbjct: 228 IYLWTLPMFHCNGWCFPWTLAAIGGTNVCLRKVDPEHILTLIKEQGVTHYCGAPIVHSMI 287
Query: 292 SSSPEAKQ--LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPK 349
+ + A+ ++ V L AG+ PPA VL R E +G ++H YG TE G C + +
Sbjct: 288 ADAATARSELIEHKVYGLIAGAAPPASVLERMEKIGIELTHVYGLTETYGPASVCTKQTE 347
Query: 350 WNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLK 409
W + ER L RQGV E+ ++D ET V DG+T GEI+ RG +M GYL+
Sbjct: 348 WAQCSLEERVRLNGRQGVAYPLQEEMAVLDSETMAPVPADGKTIGEIMFRGNIVMKGYLR 407
Query: 410 DPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMV 469
+ AT + G +++GD+ ++ PDGY++I+DR KDVIISGGENISS E+E ++ HP V
Sbjct: 408 NEAATREAFAGGWFHSGDLAVIEPDGYVKIRDRLKDVIISGGENISSLEVEDIVQRHPDV 467
Query: 470 NEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFID 529
AVV D W E+P AFV L++G++ +E +I++CR +I Y PK ++F
Sbjct: 468 EFVAVVAMTDDKWGEVPAAFVQLRSGSE-----LSEDALIRFCREQISHYKAPKKIIF-G 521
Query: 530 ELPKTATGKVQKYVL 544
+LP TATGK+QK+ L
Sbjct: 522 QLPTTATGKIQKFQL 536
>gi|221210146|ref|ZP_03583127.1| AMP-dependent synthetase and ligase [Burkholderia multivorans CGD1]
gi|221170834|gb|EEE03300.1| AMP-dependent synthetase and ligase [Burkholderia multivorans CGD1]
Length = 547
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/543 (44%), Positives = 336/543 (61%), Gaps = 20/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ F+ R+A D +I++ D TW++TY R +LAS+L++ G+
Sbjct: 6 LGRREANYVPLTPIDFLVRSAEVYGDRVAIVHGDVRRTWAETYARARRLASALAAAGVGR 65
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM E HF VPM+GA+ NTINTRLDA ++ +L+H E+K++ VD +
Sbjct: 66 GETVAALLPNIPAMVEAHFGVPMAGAVLNTINTRLDAASVLFMLRHGEAKVLIVDTEYAD 125
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ P KLV + D + + P R A +D YE +A GDP ++W
Sbjct: 126 IAQRAAQELP----GLKLVSVAD-----AMPADPARFAGA--ID-YEAFVASGDPDYAWH 173
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPMFH N
Sbjct: 174 PPADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHAVYLWTLPMFHCN 233
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW F W A NVCLRKFDA TVF LIR+ VTH CGAPIV + ++++P + +D
Sbjct: 234 GWCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERVTHYCGAPIVQSAIANAPAELREGID 293
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V + AG+ P V+ + + +GF + H YG TE+ G CA + W+ L ERA L
Sbjct: 294 HTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAKQAHWDALSDDERARL 353
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+ +AT + G
Sbjct: 354 NARQGVRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKGYLKNEKATDEAFHGG 413
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV PDP
Sbjct: 414 WFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVAMPDPK 473
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV L+ G + TE++I+ +CR + + VPK V F ELPKT+TGK+QK
Sbjct: 474 WGEVPCAFVELRDGASA-----TEEEIVAHCRQLLAGFKVPKAVRF-GELPKTSTGKIQK 527
Query: 542 YVL 544
+ L
Sbjct: 528 FQL 530
>gi|13475803|ref|NP_107373.1| acyl-CoA synthetase [Mesorhizobium loti MAFF303099]
gi|14026562|dbj|BAB53159.1| probable AMP-binding protein [Mesorhizobium loti MAFF303099]
Length = 541
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/546 (41%), Positives = 325/546 (59%), Gaps = 24/546 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN L+PL F++RA ++ Y D TW+QT RC +A+ L++ G+ PG VS
Sbjct: 13 ANCVALSPLSFLKRAELVYGARSAVTYGDVRRTWAQTGARCRSVAAGLAALGVGPGDTVS 72
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
V++PNIP ++ELH+AVP+ GA+ NTINTRL+ T++ IL HS+S LV D + LL E
Sbjct: 73 VLSPNIPELFELHYAVPLLGAVLNTINTRLEPETVAYILAHSDSTLVIADTAFAPLLREA 132
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD-TYENMLAKGDPQFSWVRPKS 187
L + T +V + D + +S A+F + +YE++ A P W PK
Sbjct: 133 FRL---NGNTLPVVDVVDAQAQAS----------AEFGERSYEDLAAH--PPMGWELPKD 177
Query: 188 DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSF 247
+ + LNYT GT+ PKGV+ ++ +++A+ ++ W +P+ L +PMFH NGW+
Sbjct: 178 EWQALALNYTSGTSGRPKGVIYHHRGAYLMAMGTIAAWALPQHPTYLSVVPMFHCNGWTH 237
Query: 248 TWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLDRPVR 305
W A+VGA V R + + H VTHM APIVL +L A+ + +R
Sbjct: 238 PWSMAIVGANMVFTRDASPGKLLEAMAAHRVTHMGAAPIVLQMLCDGRGASAQPFNPQIR 297
Query: 306 ILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
++TAG+PPP VL + +G V YG TE G C W+ +W L RA +A Q
Sbjct: 298 VMTAGAPPPPAVLEKAAQMGLDVMQVYGLTETYGHISQCLWQDEWEALSVSARAEKQAMQ 357
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYT 425
GV + ++ +VD +TG V RDG T+GEI +RG ++M GY KD +T+ + G +++
Sbjct: 358 GVAFPMVEDIRVVDRDTGTDVPRDGLTQGEIAIRGNTVMKGYYKDATSTAAAFESGWFWS 417
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD ++HPDGY++I+DR KDVIISGGENISS E+ESVLY HP ++ AAVV RP P W E
Sbjct: 418 GDAAVVHPDGYIQIRDRLKDVIISGGENISSVEVESVLYRHPAISVAAVVARPHPKWGES 477
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLG 545
PCAFV L+ G + TE +II +CRA I + PKTVVF LPKTATGK+QK++L
Sbjct: 478 PCAFVELREGASA-----TEAEIIAFCRANIAHFKAPKTVVF-GPLPKTATGKIQKFILR 531
Query: 546 DIANSM 551
A +
Sbjct: 532 AAARDL 537
>gi|167567774|ref|ZP_02360690.1| acyl-CoA synthetase [Burkholderia oklahomensis EO147]
gi|167572539|ref|ZP_02365413.1| acyl-CoA synthetase [Burkholderia oklahomensis C6786]
Length = 553
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 240/542 (44%), Positives = 325/542 (59%), Gaps = 28/542 (5%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTP+ FI RAA + ++++ D TWS+TY R +LAS+L G+ G V+
Sbjct: 14 ANYVPLTPIDFIARAAEVYGERLAVVHGDVRRTWSETYARARRLASALERAGVGRGDTVA 73
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----HLSSSL 124
+ PNIP M E HF VPM+GA+ N +NTRLD ++ +L+H E+K++ VD +
Sbjct: 74 ALLPNIPQMIEAHFGVPMAGAVLNALNTRLDIPSMLFMLRHGEAKVLIVDTEFAEFAHRA 133
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
LEV L +V + D + + P R A YE L GDP ++W
Sbjct: 134 ALEVPGL--------TIVGVAD-----AMPADPARFHGAT---DYEAFLEGGDPGYAWAL 177
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
P + D + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPMFH NG
Sbjct: 178 PSDEWDAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHAVYLWTLPMFHCNG 237
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDR 302
W F W A NVCLRKFDA V LIR+ VTH GAPIV + ++++P + +
Sbjct: 238 WCFPWAVAARAGVNVCLRKFDAKLVLDLIRRERVTHYSGAPIVQSAIANAPAEWRAGIAH 297
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
V AG+ P V+ + + +GF ++H YG TE+ G CA +P W+ LP E A L
Sbjct: 298 EVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAKQPHWDALPDDEVAQLN 357
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+P AT + G
Sbjct: 358 ARQGVRYHLQAGATVLDPDTMTPVPADGETIGEIMFRGNICMKGYLKNPHATDEAFAGGW 417
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
++TGD+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV PDP W
Sbjct: 418 FHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVALPDPKW 477
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E+PCAFV L+ GM TE++II +CR + Y +PK V F ELPKT+TGK+QK+
Sbjct: 478 GEVPCAFVELRD-----GMTATEEEIIAHCRLLLAAYKIPKAVRF-GELPKTSTGKIQKF 531
Query: 543 VL 544
L
Sbjct: 532 QL 533
>gi|161520855|ref|YP_001584282.1| acyl-CoA synthetase [Burkholderia multivorans ATCC 17616]
gi|189352962|ref|YP_001948589.1| acyl-CoA synthetase [Burkholderia multivorans ATCC 17616]
gi|160344905|gb|ABX17990.1| AMP-dependent synthetase and ligase [Burkholderia multivorans ATCC
17616]
gi|189336984|dbj|BAG46053.1| O-succinylbenzoic acid-CoA ligase [Burkholderia multivorans ATCC
17616]
Length = 550
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/543 (44%), Positives = 336/543 (61%), Gaps = 20/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ F+ R+A D +I++ D TW++TY R +LAS+L++ G+
Sbjct: 9 LGRREANYVPLTPIDFLVRSAEVYGDRVAIVHGDVRRTWAETYARARRLASALAAAGVGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM E HF VPM+GA+ NTINTRLDA ++ +L+H E+K++ VD +
Sbjct: 69 GETVAALLPNIPAMVEAHFGVPMAGAVLNTINTRLDAASVLFMLRHGEAKVLIVDTEYAD 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ P KLV + D + + P R A +D YE +A GDP ++W
Sbjct: 129 IAQRAAQELP----GLKLVSVAD-----AMPADPARFAGA--ID-YEAFVASGDPDYAWH 176
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPMFH N
Sbjct: 177 PPADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHAVYLWTLPMFHCN 236
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW F W A NVCLRKFDA TVF LIR+ VTH CGAPIV + ++++P + +D
Sbjct: 237 GWCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERVTHYCGAPIVQSAIANAPAELREGID 296
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V + AG+ P V+ + + +GF + H YG TE+ G CA + W+ L ERA L
Sbjct: 297 HTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAKQGHWDALSDDERARL 356
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+ +AT + G
Sbjct: 357 NARQGVRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKGYLKNEKATDEAFHGG 416
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV PDP
Sbjct: 417 WFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVAMPDPK 476
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV L+ G + TE++I+ +CR + + VPK V F ELPKT+TGK+QK
Sbjct: 477 WGEVPCAFVELRDGASA-----TEEEIVAHCRQLLAGFKVPKAVRF-GELPKTSTGKIQK 530
Query: 542 YVL 544
+ L
Sbjct: 531 FQL 533
>gi|12698386|gb|AAK01500.1| AMP-binding protein domain [Pseudomonas aeruginosa]
Length = 563
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/547 (42%), Positives = 332/547 (60%), Gaps = 16/547 (2%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PN AN PL+PL F++RAA +++Y Y++ Q + R LAS+L G+
Sbjct: 24 LAPNEANHVPLSPLSFLKRAAQVYPQRDAVVYGARRYSYRQLHERSCALASALERVGVQA 83
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+++APNIP M E H+ VP +GA+ IN RL+AR+I+ IL+H ++++ D +
Sbjct: 84 GERVAILAPNIPEMLEAHYGVPGAGAVLVCINIRLEARSIAFILRHCAARVLICDREFGA 143
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ + +++ P LV I DD+ R A +D YE LA+GDP
Sbjct: 144 VAQQALAML---DAPPLLVGIDDDQA--------ERADLAHDLD-YEAFLAQGDPGRPLS 191
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+++ + +NYT GTT PKGVV ++ ++ A + + + +SV LWTLPMFH N
Sbjct: 192 APQNEWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGALIFQLGPRSVYLWTLPMFHCN 251
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GWS TW + G T+VCLRK + A I +H VTH+ AP+V+++L + A P
Sbjct: 252 GWSHTWAVTLSGGTHVCLRKVQPDAIHAAIAEHAVTHLSAAPVVMSMLIHAEHASVPAVP 311
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
V ++T G+ PP+ V+ E+ GF ++H YG TE G + C W+P ++LP RA +
Sbjct: 312 VSVITGGAAPPSAVIAAMEARGFSITHAYGMTESYGPSTLCLWQPGVDELPLEARAQFMS 371
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQGV L E ++D +TG V DG+T GE+V+RG ++M GYL +PEAT + DG
Sbjct: 372 RQGVAHPMLEEATVLDTDTGRPVPADGRTLGELVVRGNTVMKGYLHNPEATRAALADGWL 431
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
+TGD+ ++HPDGY+EIKDR+KD+IISGGENISS EIE VLY HP V EAAVV RPD W
Sbjct: 432 HTGDLAVLHPDGYVEIKDRAKDIIISGGENISSLEIEEVLYQHPEVVEAAVVARPDSRWG 491
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E P AFV+L+ TT D++++CR R+ + P+ V + ELPKTATGK+QK+V
Sbjct: 492 ETPHAFVALRADALP---RTTGDDLVRWCRERLAHFKAPRHVT-LTELPKTATGKIQKFV 547
Query: 544 LGDIANS 550
L + A
Sbjct: 548 LREWARQ 554
>gi|116050159|ref|YP_791024.1| acyl-CoA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
gi|115585380|gb|ABJ11395.1| Putative Acyl-CoA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
Length = 548
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/547 (42%), Positives = 332/547 (60%), Gaps = 16/547 (2%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PN AN PL+PL F++RAA +++Y Y++ Q + R LAS+L G+
Sbjct: 9 LAPNEANHVPLSPLSFLKRAAQVYPQRDAVVYGARRYSYRQLHERSCALASALERVGVQA 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+++APNIP M E H+ VP +GA+ IN RL+AR+I+ IL+H ++++ D +
Sbjct: 69 GERVAILAPNIPEMLEAHYGVPGAGAVLVCINIRLEARSIAFILRHCAARVLICDREFGA 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ + +++ P LV I DD+ R A +D YE LA+GDP
Sbjct: 129 VAQQALAML---DAPPLLVGIDDDQA--------ERADLAHDLD-YEAFLAQGDPGRPLS 176
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+++ + +NYT GTT PKGVV ++ ++ A + + + +SV LWTLPMFH N
Sbjct: 177 APQNEWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGALIFQLGPRSVYLWTLPMFHCN 236
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GWS TW + G T+VCLRK + A I +H VTH+ AP+V+++L + A P
Sbjct: 237 GWSHTWAVTLSGGTHVCLRKVQPDAIHAAIAEHAVTHLSAAPVVMSMLIHAEHASVPAVP 296
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
V ++T G+ PP+ V+ E+ GF ++H YG TE G + C W+P ++LP RA +
Sbjct: 297 VSVITGGAAPPSAVIAAMEARGFSITHAYGMTESYGPSTLCLWQPGVDELPLEARAQFMS 356
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQGV L E ++D +TG V DG+T GE+V+RG ++M GYL +PEAT + DG
Sbjct: 357 RQGVAHPMLEEATVLDTDTGRPVPADGRTLGELVVRGNTVMKGYLHNPEATRAALADGWL 416
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
+TGD+ ++HPDGY+EIKDR+KD+IISGGENISS EIE VLY HP V EAAVV RPD W
Sbjct: 417 HTGDLAVLHPDGYVEIKDRAKDIIISGGENISSLEIEEVLYQHPEVVEAAVVARPDSRWG 476
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E P AFV+L+ TT D++++CR R+ + P+ V + ELPKTATGK+QK+V
Sbjct: 477 ETPHAFVALRADALP---RTTGDDLVRWCRERLAHFKAPRHVT-LTELPKTATGKIQKFV 532
Query: 544 LGDIANS 550
L + A
Sbjct: 533 LREWARQ 539
>gi|145323958|ref|NP_001077568.1| acyl activating enzyme 1 [Arabidopsis thaliana]
gi|332191866|gb|AEE29987.1| acyl activating enzyme 1 [Arabidopsis thaliana]
Length = 478
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/478 (44%), Positives = 311/478 (65%), Gaps = 14/478 (2%)
Query: 77 MYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHS 136
M ELHF VPM+GA+ T+N R D+ ++++L+HS +K++F DH + +
Sbjct: 1 MVELHFGVPMAGALLCTLNIRHDSSLVAVLLRHSGTKVIFADHQFLQIAEGACEILSNKG 60
Query: 137 -KTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLN 195
K P LVLI + ++ S S R ++ + YE+++A G F +RP + D + +N
Sbjct: 61 DKVPILVLIPEP--LTQSVSRKKR---SEEMMEYEDVVAMGKSDFEVIRPTDECDAISVN 115
Query: 196 YTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVG 255
YT GTTS+PKGVV ++ ++ ++ +++ + LWT PMFH NGW WG +G
Sbjct: 116 YTSGTTSSPKGVVYSHRGAYLNSLAAVLLNEMHSSPTYLWTNPMFHCNGWCLLWGVTAIG 175
Query: 256 ATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP--VRILTAGSPP 313
TN+CLR A +F I +H VTHM GAP +LN++ ++PE++Q P V +T +PP
Sbjct: 176 GTNICLRNVTAKAIFDNISQHKVTHMGGAPTILNMIINAPESEQKPLPGKVSFITGAAPP 235
Query: 314 PAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLT 373
PA V+ + E LGF + H YG TE G C WKP+W+ LP E+A +KARQGV +GL
Sbjct: 236 PAHVIFKMEELGFSMFHSYGLTETYGPGTICTWKPEWDSLPREEQAKMKARQGVNHLGLE 295
Query: 374 EVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHP 433
E+ + DP T ++ DG T GE+V RG ++M GYLK+PEAT + K G +++GD+G+ HP
Sbjct: 296 EIQVKDPVTMRTLPADGVTMGEVVFRGNTVMNGYLKNPEATKEAFKGGWFWSGDLGVKHP 355
Query: 434 DGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLK 493
DGY+E+KDRSKD+IISGGENISS E+ES L++HP V EAAVV RPD +W E CAFV LK
Sbjct: 356 DGYIELKDRSKDIIISGGENISSIEVESTLFTHPCVLEAAVVARPDEYWGETACAFVKLK 415
Query: 494 TGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSM 551
G+ + + +++I YCR R+P YM P+++VF ++LPKT+TGKVQK+VL A ++
Sbjct: 416 DGSKA-----SAEELISYCRDRLPHYMAPRSIVF-EDLPKTSTGKVQKFVLRTKAKAL 467
>gi|421156118|ref|ZP_15615571.1| acyl-CoA synthetase [Pseudomonas aeruginosa ATCC 14886]
gi|421180667|ref|ZP_15638215.1| acyl-CoA synthetase [Pseudomonas aeruginosa E2]
gi|424941457|ref|ZP_18357220.1| putative Acyl-CoA synthetase [Pseudomonas aeruginosa NCMG1179]
gi|451986317|ref|ZP_21934505.1| Long-chain-fatty-acid--CoA ligase [Pseudomonas aeruginosa 18A]
gi|187939977|gb|ACD39112.1| AMP-dependent synthetase and ligase family protein [Pseudomonas
aeruginosa]
gi|346057903|dbj|GAA17786.1| putative Acyl-CoA synthetase [Pseudomonas aeruginosa NCMG1179]
gi|404519413|gb|EKA30170.1| acyl-CoA synthetase [Pseudomonas aeruginosa ATCC 14886]
gi|404545109|gb|EKA54218.1| acyl-CoA synthetase [Pseudomonas aeruginosa E2]
gi|451756033|emb|CCQ87028.1| Long-chain-fatty-acid--CoA ligase [Pseudomonas aeruginosa 18A]
Length = 549
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/547 (42%), Positives = 332/547 (60%), Gaps = 16/547 (2%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PN AN PL+PL F++RAA +++Y Y++ Q + R LAS+L G+
Sbjct: 10 LAPNEANHVPLSPLSFLKRAAQVYPQRDAVVYGARRYSYRQLHERSCALASALERVGVQA 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+++APNIP M E H+ VP +GA+ IN RL+AR+I+ IL+H ++++ D +
Sbjct: 70 GERVAILAPNIPEMLEAHYGVPGAGAVLVCINIRLEARSIAFILRHCAARVLICDREFGA 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ + +++ P LV I DD+ R A +D YE LA+GDP
Sbjct: 130 VAQQALAML---DAPPLLVGIDDDQA--------ERADLAHDLD-YEAFLAQGDPGRPLS 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+++ + +NYT GTT PKGVV ++ ++ A + + + +SV LWTLPMFH N
Sbjct: 178 APQNEWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGALIFQLGPRSVYLWTLPMFHCN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GWS TW + G T+VCLRK + A I +H VTH+ AP+V+++L + A P
Sbjct: 238 GWSHTWAVTLSGGTHVCLRKVQPDAIHAAIAEHAVTHLSAAPVVMSMLIHAEHASVPAVP 297
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
V ++T G+ PP+ V+ E+ GF ++H YG TE G + C W+P ++LP RA +
Sbjct: 298 VSVITGGAAPPSAVIAAMEARGFSITHAYGMTESYGPSTLCLWQPGVDELPLEARAQFMS 357
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQGV L E ++D +TG V DG+T GE+V+RG ++M GYL +PEAT + DG
Sbjct: 358 RQGVAHPMLEEATVLDTDTGRPVPADGRTLGELVVRGNTVMKGYLHNPEATRAALADGWL 417
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
+TGD+ ++HPDGY+EIKDR+KD+IISGGENISS EIE VLY HP V EAAVV RPD W
Sbjct: 418 HTGDLAVLHPDGYVEIKDRAKDIIISGGENISSLEIEEVLYQHPEVVEAAVVARPDSRWG 477
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E P AFV+L+ TT D++++CR R+ + P+ V + ELPKTATGK+QK+V
Sbjct: 478 ETPHAFVALRADALP---RTTGDDLVRWCRERLAHFKAPRHVT-LTELPKTATGKIQKFV 533
Query: 544 LGDIANS 550
L + A
Sbjct: 534 LREWARQ 540
>gi|393757715|ref|ZP_10346539.1| o-succinylbenzoate--CoA ligase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393165407|gb|EJC65456.1| o-succinylbenzoate--CoA ligase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 550
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 240/550 (43%), Positives = 329/550 (59%), Gaps = 21/550 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIY----NDTTYTWSQTYRRCLQLASSLSSFGINPG 64
AN L+PL FIER+A D P+++Y + +WSQ Y R QL S+LS GI G
Sbjct: 14 ANYRVLSPLDFIERSAFVYPDYPALVYGPAQDGIKMSWSQLYARTRQLGSALSKAGIGKG 73
Query: 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V+V+ PN P M + HF VPM GA+ NT+NTRLDA TI+ +L H E++ V VD +++
Sbjct: 74 DTVAVMLPNTPPMVQAHFGVPMCGAVLNTLNTRLDASTIAYMLDHGEARAVLVDSEFAAV 133
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
+ E +SL SK P LV+ D + TYE + GDP + W
Sbjct: 134 MKEALSL--RESKAPILVIDVVDPYFDQGAE-------GIGSQTYEAFVDGGDPDYDWQL 184
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
P ++ D + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPMFH NG
Sbjct: 185 PANEWDAIALNYTSGTTGKPKGVVYHHRGAYLGALSNVLEWDMPKHAVYLWTLPMFHCNG 244
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLDR 302
W+F W A NVCLRK +A + + +GVTH CGAPIV +LL ++ E +L +
Sbjct: 245 WTFPWVIAARAGVNVCLRKVEAQAMVDNMVDYGVTHYCGAPIVHSLLVNADETLKSRLPK 304
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
V + AG+ PPA ++ E +GF ++H YG TE G CA WN+L +ERA
Sbjct: 305 GVSAMVAGAAPPATMIEGMERMGFALTHVYGLTETYGPASVCAQHAPWNELGIQERAQRN 364
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
ARQGVR V ++DP+T V DGQT GEI+ RG M GYLK+PEAT + + G
Sbjct: 365 ARQGVRYHLQGAVKVLDPQTMQPVPADGQTMGEIMFRGNITMKGYLKNPEATQESLGAGW 424
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
++TGD+ + PDGY+ IKDRSKD+IISGGENISS EIE V+Y HP V AAVV +PD W
Sbjct: 425 FHTGDLAVCEPDGYVRIKDRSKDIIISGGENISSIEIEDVMYRHPAVQAAAVVAQPDERW 484
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E P +V L+ G T +++ +CR + + +P+ F+ ELPKTATGK+QK+
Sbjct: 485 GEAPHVYVELRPGAQ-----VTVEELRAHCRQHLAGFKIPRYFSFM-ELPKTATGKIQKF 538
Query: 543 VLGDIANSMS 552
L A ++
Sbjct: 539 ALRQQAKQVA 548
>gi|107101653|ref|ZP_01365571.1| hypothetical protein PaerPA_01002697 [Pseudomonas aeruginosa PACS2]
Length = 549
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/547 (42%), Positives = 332/547 (60%), Gaps = 16/547 (2%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PN AN PL+PL F++RAA +++Y Y++ Q + R LAS+L G+
Sbjct: 10 LAPNEANHVPLSPLSFLKRAAQVYPQRDAVVYGARRYSYRQLHERSCALASALERVGVQA 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+++APNIP M E H+ VP +GA+ IN RL+AR+I+ IL+H ++++ D +
Sbjct: 70 GERVAILAPNIPEMLEAHYGVPGAGAVLVCINIRLEARSIAFILRHCAARVLICDREFGA 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ + +++ P LV I DD+ R A +D YE LA+GDP
Sbjct: 130 VAQQALAML---DAPPLLVGIDDDQA--------ERADLAHDLD-YEAFLAQGDPGRPLS 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+++ + +NYT GTT PKGVV ++ ++ A + + + +SV LWTLPMFH N
Sbjct: 178 APQNEWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGALIFQLGPRSVYLWTLPMFHCN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GWS TW + G T+VCLRK + A I +H VTH+ AP+V+++L + A P
Sbjct: 238 GWSHTWAVTLSGGTHVCLRKVQPDAIHAAIAEHAVTHLSAAPVVMSMLIHAEHASVPAVP 297
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
V ++T G+ PP+ V+ E+ GF ++H YG TE G + C W+P ++LP RA +
Sbjct: 298 VSVITGGAAPPSAVIAAMEARGFSITHAYGMTESYGPSTLCLWQPGVDELPLEARAQFMS 357
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQGV L E ++D +TG V DG+T GE+V+RG ++M GYL +PEAT + DG
Sbjct: 358 RQGVAHPMLEEATVLDTDTGRPVPADGRTLGELVVRGNTVMKGYLHNPEATRAALSDGWL 417
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
+TGD+ ++HPDGY+EIKDR+KD+IISGGENISS EIE VLY HP V EAAVV RPD W
Sbjct: 418 HTGDLAVLHPDGYVEIKDRAKDIIISGGENISSLEIEEVLYQHPEVVEAAVVARPDSRWG 477
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E P AFV+L+ TT D++++CR R+ + P+ V + ELPKTATGK+QK+V
Sbjct: 478 ETPHAFVALRADALP---RTTGDDLVRWCRERLAHFKAPRHVT-LTELPKTATGKIQKFV 533
Query: 544 LGDIANS 550
L + A
Sbjct: 534 LREWARQ 540
>gi|218891821|ref|YP_002440688.1| acyl-CoA synthetase [Pseudomonas aeruginosa LESB58]
gi|218772047|emb|CAW27826.1| Putative Acyl-CoA synthetase [Pseudomonas aeruginosa LESB58]
gi|453043443|gb|EME91174.1| acyl-CoA synthetase [Pseudomonas aeruginosa PA21_ST175]
Length = 549
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/547 (42%), Positives = 332/547 (60%), Gaps = 16/547 (2%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PN AN PL+PL F++RAA +++Y Y++ Q + R LAS+L G+
Sbjct: 10 LAPNEANHVPLSPLSFLKRAAQVYPQRDAVVYGARRYSYRQLHERSCALASALERVGVQA 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+++APNIP M E H+ VP +GA+ IN RL+AR+I+ IL+H ++++ D +
Sbjct: 70 GERVAILAPNIPEMLEAHYGVPGAGAVLVCINIRLEARSIAFILRHCAARVLICDREFGA 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ + +++ P LV I DD+ R A +D YE LA+GDP
Sbjct: 130 VAQQALAML---DAPPLLVGIDDDQA--------ERADLAHDLD-YEAFLAQGDPGRPLS 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+++ + +NYT GTT PKGVV ++ ++ A + + + +S+ LWTLPMFH N
Sbjct: 178 APQNEWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGALIFQLGPRSIYLWTLPMFHCN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GWS TW + G T+VCLRK + A I +H VTH+ AP+V+++L + A P
Sbjct: 238 GWSHTWAVTLSGGTHVCLRKVQPDAIHAAIAEHAVTHLSAAPVVMSMLIHAEHASVPAVP 297
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
V ++T G+ PP+ V+ E+ GF ++H YG TE G + C W+P ++LP RA +
Sbjct: 298 VSVITGGAAPPSAVIAAMEARGFSITHAYGMTESYGPSTLCLWQPGVDELPLEARAQFMS 357
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQGV L E ++D +TG V DG+T GE+V+RG ++M GYL +PEAT + DG
Sbjct: 358 RQGVAHPMLEEATVLDTDTGRPVPADGRTLGELVVRGNTVMKGYLHNPEATRAALADGWL 417
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
+TGD+ ++HPDGY+EIKDR+KD+IISGGENISS EIE VLY HP V EAAVV RPD W
Sbjct: 418 HTGDLAVLHPDGYVEIKDRAKDIIISGGENISSLEIEEVLYQHPEVVEAAVVARPDSRWG 477
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E P AFV+L+ TT D++++CR R+ + P+ V + ELPKTATGK+QK+V
Sbjct: 478 ETPHAFVALRADALP---RTTGDDLVRWCRERLAHFKAPRHVT-LTELPKTATGKIQKFV 533
Query: 544 LGDIANS 550
L + A
Sbjct: 534 LREWARQ 540
>gi|221196514|ref|ZP_03569561.1| AMP-dependent synthetase and ligase [Burkholderia multivorans
CGD2M]
gi|221203183|ref|ZP_03576202.1| AMP-dependent synthetase and ligase [Burkholderia multivorans CGD2]
gi|221177117|gb|EEE09545.1| AMP-dependent synthetase and ligase [Burkholderia multivorans CGD2]
gi|221183068|gb|EEE15468.1| AMP-dependent synthetase and ligase [Burkholderia multivorans
CGD2M]
Length = 547
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/543 (44%), Positives = 336/543 (61%), Gaps = 20/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ F+ R+A D +I++ D TW++TY R +LAS+L++ G+
Sbjct: 6 LGRREANYVPLTPIDFLVRSAEVYGDRVAIVHGDVRRTWAETYARARRLASALAAAGVGR 65
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM E HF VPM+GA+ NTINTRLDA ++ +L+H E+K++ VD +
Sbjct: 66 GETVAALLPNIPAMVEAHFGVPMAGAVLNTINTRLDAASVLFMLRHGEAKVLIVDTEYAD 125
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ P K+V + D + + P R A +D YE +A GDP ++W
Sbjct: 126 IAQRAALELP----GLKIVSVAD-----AMPADPARFARA--ID-YEAFVAAGDPDYAWT 173
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPMFH N
Sbjct: 174 PPADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHAVYLWTLPMFHCN 233
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW F W A NVCLRKFDA TVF LIR+ VTH CGAPIV + ++++P + +D
Sbjct: 234 GWCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERVTHYCGAPIVQSAIANAPAELREGID 293
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V + AG+ P V+ + + +GF + H YG TE+ G CA + W+ L ERA L
Sbjct: 294 HTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAKQAHWDALSDDERARL 353
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+ +AT + G
Sbjct: 354 NARQGVRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKGYLKNEKATDEAFHGG 413
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV PDP
Sbjct: 414 WFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVAMPDPK 473
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV L+ G + TE++I+ +CR + + VPK V F ELPKT+TGK+QK
Sbjct: 474 WGEVPCAFVELRDGASA-----TEEEIVAHCRQLLAGFKVPKAVRF-GELPKTSTGKIQK 527
Query: 542 YVL 544
+ L
Sbjct: 528 FQL 530
>gi|119476024|ref|ZP_01616376.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2143]
gi|119450651|gb|EAW31885.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2143]
Length = 542
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/552 (42%), Positives = 334/552 (60%), Gaps = 22/552 (3%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L N AN LTP+ F+ AA D ++++ D Y ++ +RC +LAS+LS GI
Sbjct: 8 ELPKNLANHTALTPVHFLSHAAKTYPDNLAVVHGDLRYNYATLQQRCRRLASALSQHGIG 67
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
PG VSVIAPNIPA E HFAVPM+GA+ N+IN RLDA T + I H E ++ +D +
Sbjct: 68 PGDTVSVIAPNIPAHLEAHFAVPMTGAVLNSINIRLDADTFAYIFDHGECDVLLIDAQFA 127
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPP-RIPPADFVDTYENMLAKGDPQFS 181
+ + +S K+ + LI D + S P RI TYE L G+P
Sbjct: 128 EVAKQALS------KSSRRPLIID---LDDSLGPRSVRIGST----TYEQFLLTGNPDIV 174
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
P + + LNYT GTT PKGVV ++ A+ +++ W + LWTLPMFH
Sbjct: 175 PALPADEWQSLALNYTSGTTGNPKGVVYHHRGAHQNAMGNILAWNMGHAPTYLWTLPMFH 234
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQ 299
NGW F W ++ +VCLR A + I + V+HMCGAPIVL++++++PE Q
Sbjct: 235 CNGWCFPWTITLLAGVHVCLRDVAADAIIESIVANDVSHMCGAPIVLSMIANAPEVLRNQ 294
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+ + ++I+TAG+ PPA V++ E LG ++H YG TE+ G V CAW +W++L RA
Sbjct: 295 IPKGIKIMTAGAAPPAAVIVAIEDLGAEITHTYGLTEVYGPCVYCAWHTEWDELSREHRA 354
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
++KARQGV L +D++DPET V DG+T GE++ RG +M GYLK+P+AT + +
Sbjct: 355 AMKARQGVAYPVLNNLDVLDPETMRPVPDDGETIGEVMFRGNVVMKGYLKNPDATREALA 414
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
DG +++GD+ + HPD Y+EIKDRSKD+IISGGENISS E+ES LY H V AAVV + D
Sbjct: 415 DGWFHSGDLAVKHPDNYIEIKDRSKDIIISGGENISSIEVESALYQHSAVLSAAVVAKAD 474
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E PCAFV LK GT + +I + R + + +PK V+F ELPKT+TGK+
Sbjct: 475 DKWGETPCAFVELKDGT-----TLDAQTLIAFSRNHLASFKIPKHVIF-GELPKTSTGKI 528
Query: 540 QKYVLGDIANSM 551
QK++L + A ++
Sbjct: 529 QKFILREKAKTI 540
>gi|254488480|ref|ZP_05101685.1| AMP-binding domain protein [Roseobacter sp. GAI101]
gi|214045349|gb|EEB85987.1| AMP-binding domain protein [Roseobacter sp. GAI101]
Length = 552
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/545 (40%), Positives = 326/545 (59%), Gaps = 21/545 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+PL ++RAA D ++ Y +++Q + RC +LA++L++ G+ G VV+
Sbjct: 27 ANYVPLSPLSHLQRAAKVFPDVLAVSYGAHRVSYAQYHARCSRLAAALNAMGVASGEVVA 86
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PNIPA E HF VP GA+ NTINTRLD T++ IL H E+K+V D + +++
Sbjct: 87 TVLPNIPAQAEAHFGVPACGAVLNTINTRLDVDTVTYILDHGEAKVVLAD----TQFIDL 142
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
V TP ++ D + P YE++LA+GDP F W P+ +
Sbjct: 143 VEAACAVLNTPPRIIEVPDADAG--------FPATGRHLAYEDLLAQGDPDFDWRMPQDE 194
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
+ + LNYT GTT PKGVV ++ +++ + ++I W + + V + +P+FH NGW+ T
Sbjct: 195 WESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVISWRMVLRPVFMQIVPLFHCNGWNHT 254
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLDRPVRI 306
W ++G T VC R A ++ I GVTH GAPIVLNL+ +S E + D V +
Sbjct: 255 WMMPLLGGTLVCCRDITAAAIYNAIADEGVTHFGGAPIVLNLMVNASDAERRSFDHQVEV 314
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
TAG+PP L + E+LGF V+ YG TE G C W W+ L +RA++KARQG
Sbjct: 315 FTAGAPPAPATLSKIEALGFNVTQVYGLTETYGHVTECLWSSDWDNLQGPDRAAIKARQG 374
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
V + ++ ++D + + V DG T+GEI++RG S+M GY K+P AT++ G +++G
Sbjct: 375 VAMPMMEDITVLDADM-VQVPMDGATQGEIMIRGNSVMKGYFKNPTATAEAFAGGYFHSG 433
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+ + HPDGY++I DR+KD+IISGGENISS E+E VL HP VN AAVV +PD W E+P
Sbjct: 434 DLAIQHPDGYMQIADRAKDIIISGGENISSVEVEGVLMGHPDVNLAAVVAKPDDKWGEVP 493
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546
CAFV LK G E ++I + R + + PK VVF ELPKT+TGK+QK+ L
Sbjct: 494 CAFVELKPGKTG-----DETEMIAFTRKTLAGFKTPKKVVF-QELPKTSTGKIQKFELRK 547
Query: 547 IANSM 551
+A ++
Sbjct: 548 LAATL 552
>gi|421474453|ref|ZP_15922488.1| long-chain-fatty-acid--CoA ligase [Burkholderia multivorans CF2]
gi|400232094|gb|EJO61736.1| long-chain-fatty-acid--CoA ligase [Burkholderia multivorans CF2]
Length = 550
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 242/543 (44%), Positives = 335/543 (61%), Gaps = 20/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ F+ R+A D +I++ D TW++TY R +LAS+L++ G+
Sbjct: 9 LGRREANYVPLTPIDFLVRSAEVYGDRVAIVHGDVRRTWAETYARARRLASALAAAGVGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIPAM E HF VPM+GA+ NTINTRLDA ++ +L+H E+K++ VD +
Sbjct: 69 GETVAALLPNIPAMVEAHFGVPMAGAVLNTINTRLDAASVLFMLRHGEAKVLIVDTEYAD 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ P KLV + D + + P R A +D YE +A GDP ++W
Sbjct: 129 IAQRAAQELP----GLKLVSVAD-----AMPADPARFAGA--ID-YEAFVASGDPDYAWH 176
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LW LPMFH N
Sbjct: 177 PPADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHAVYLWALPMFHCN 236
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW F W A NVCLRKFDA TVF LIR+ VTH CGAPIV + ++++P + +D
Sbjct: 237 GWCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERVTHYCGAPIVQSAIANAPAELREGID 296
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V + AG+ P V+ + + +GF + H YG TE+ G CA + W+ L ERA L
Sbjct: 297 HTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAKQAHWDALSDDERARL 356
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+ +AT + G
Sbjct: 357 NARQGVRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKGYLKNEKATDEAFHGG 416
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV PDP
Sbjct: 417 WFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYRHPAVAVAAVVAMPDPK 476
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV L+ G + TE++I+ +CR + + VPK V F ELPKT+TGK+QK
Sbjct: 477 WGEVPCAFVELRDGASA-----TEEEIVAHCRQLLAGFKVPKAVRF-GELPKTSTGKIQK 530
Query: 542 YVL 544
+ L
Sbjct: 531 FQL 533
>gi|91777355|ref|YP_552563.1| acyl-CoA synthetase [Burkholderia xenovorans LB400]
gi|91690015|gb|ABE33213.1| Putative AMP-dependent synthetase and ligase [Burkholderia
xenovorans LB400]
Length = 543
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/543 (43%), Positives = 319/543 (58%), Gaps = 20/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN P+TP+ FI RAA D ++++ + W +TY R +LAS+L GI
Sbjct: 9 LERREANYIPVTPIDFIVRAAEVYGDRLAVVHGEIRRNWRETYERSRRLASALQRAGIER 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIP M E HF VPM+GA+ NT+NTRLD ++ +L+H E+K + VD
Sbjct: 69 GDTVAALLPNIPPMIEAHFGVPMAGAVLNTLNTRLDISSLLFMLRHGEAKALIVDTEYGE 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
FP D + IS + + P YE L GDP+F+W
Sbjct: 129 FAHRASLEFP------------DLRVISVADAMPANADQFIRATDYEAFLQSGDPEFAWT 176
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++ AV ++++W +PK +V LWTLP+FH N
Sbjct: 177 MPADEWDAIALNYTSGTTGDPKGVVYHHRGAYLNAVSNILEWDMPKHAVYLWTLPLFHCN 236
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W A NVCLRKFDA TVF LIR G+TH CGAPIV + L+++P + ++
Sbjct: 237 GWCFPWTVAARAGVNVCLRKFDAKTVFDLIRNEGITHYCGAPIVQSALANAPAEWRDGIN 296
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V + AG+ P V+ + + +GF ++H YG TE G CA + W L RA L
Sbjct: 297 HRVSTMVAGAAPAPAVIAKMKEIGFDLTHVYGLTETYGPAAVCAKQEAWETLDDSARAEL 356
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGVR V ++DP+T V DG+T GEI+ RG M GYLK+ AT + G
Sbjct: 357 NARQGVRYHLQAAVTVLDPQTLALVPNDGETIGEIMFRGNICMKGYLKNERATEAAFEGG 416
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G+ PDGY+ I+DRSKD+IISGGENISS E+E LY HP V AAVV DP
Sbjct: 417 WFHTGDLGVRMPDGYIRIRDRSKDIIISGGENISSIELEDTLYRHPAVAVAAVVAMADPK 476
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK G + ++II +CR + Y +PK V F ELPKT+TGK+QK
Sbjct: 477 WGEVPCAFVELKEGA-----QVSAEEIIAHCRLFLAGYKLPKAVRF-GELPKTSTGKIQK 530
Query: 542 YVL 544
+ L
Sbjct: 531 FEL 533
>gi|242037045|ref|XP_002465917.1| hypothetical protein SORBIDRAFT_01g048080 [Sorghum bicolor]
gi|241919771|gb|EER92915.1| hypothetical protein SORBIDRAFT_01g048080 [Sorghum bicolor]
Length = 477
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/480 (47%), Positives = 311/480 (64%), Gaps = 19/480 (3%)
Query: 77 MYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD-HL--SSSLLLEVVSLFP 133
MYELHFAVPM+GA+ T+NTR DA +S++LKHS +K+ FV+ HL L++++
Sbjct: 1 MYELHFAVPMAGAVLCTLNTRHDAAMLSVLLKHSGAKVFFVESHLLDVGRAALKLLAESS 60
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMV 193
P S P L+ TDD ++ R D YE+++ QF P +DP+
Sbjct: 61 PAS-LPALLTTTDDDGEPGGAAASGRRTCTD----YEDLIKNAPSQFDIRWP---VDPIS 112
Query: 194 LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAV 253
LNYT GTTS PKGVV ++ ++ V +++ + V LWT+PMFH NGW+ TWG A+
Sbjct: 113 LNYTSGTTSRPKGVVYSHRGAYLNTVATVLTYDVGTAPTYLWTVPMFHGNGWNLTWGLAM 172
Query: 254 VGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP--VRILTAGS 311
G TNVCLR+F A +F I + VTHM GAP VL+++ ++P A + P VR++T G+
Sbjct: 173 QGGTNVCLRRFTAKDIFDGIARWKVTHMGGAPTVLSMIVTAPPADRKPMPGTVRVITGGA 232
Query: 312 PPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIG 371
PP VL+ E LGF++ H YG TE GV CAW P+ + LPA ERA LKARQG
Sbjct: 233 PPLPHVLVEMERLGFVLYHVYGLTETCGVATVCAWTPELDALPAEERARLKARQGCHHFA 292
Query: 372 LTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMM 431
+ + D+ DP T SV RDG+T GE++ RG ++M GY +D +AT + M G +TGD+ +
Sbjct: 293 VQDADVKDPATMESVPRDGRTMGEVMFRGNTMMSGYYRDLDATKEAMAGGWLHTGDLAVR 352
Query: 432 HPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVS 491
HPDG +++KDR+KD+IISGGEN+SS E+E++L SHP V EAAVV RPD W E PCAFV
Sbjct: 353 HPDGSIQVKDRAKDIIISGGENVSSIEVETLLSSHPAVLEAAVVARPDDHWGETPCAFVK 412
Query: 492 LKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSM 551
LK G + TE +II +CR R+PRYM P+TVVF ++LPKT TGK QK+VL + A +M
Sbjct: 413 LKDGASA-----TEAEIIGFCRERLPRYMAPRTVVF-EDLPKTPTGKTQKFVLREKARAM 466
>gi|421167900|ref|ZP_15626035.1| acyl-CoA synthetase [Pseudomonas aeruginosa ATCC 700888]
gi|404532540|gb|EKA42419.1| acyl-CoA synthetase [Pseudomonas aeruginosa ATCC 700888]
Length = 549
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/547 (42%), Positives = 332/547 (60%), Gaps = 16/547 (2%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PN AN PL+PL F++RAA +++Y Y++ Q + R LAS+L G+
Sbjct: 10 LAPNEANHVPLSPLSFLKRAAQVYPQRDAVVYGARRYSYRQLHERSCALASALERVGVQA 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+++APNIP M E H+ VP +GA+ IN RL+AR+I+ IL+H ++++ D +
Sbjct: 70 GERVAILAPNIPEMLEAHYGVPGAGAVLVCINIRLEARSIAFILRHCAARVLICDREFGA 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ + +++ P LV I DD+ R A +D Y+ LA+GDP
Sbjct: 130 VAQQALAML---DAPPLLVGIDDDQA--------ERADLAHDLD-YKAFLAQGDPGRPLS 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+++ + +NYT GTT PKGVV ++ ++ A + + + +SV LWTLPMFH N
Sbjct: 178 APQNEWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGALIFQLGPRSVYLWTLPMFHCN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GWS TW + G T+VCLRK + A I +H VTH+ AP+V+++L + A P
Sbjct: 238 GWSHTWAVTLSGGTHVCLRKVQPDAIHAAIAEHAVTHLSAAPVVMSMLIHAEHASVPAVP 297
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
V ++T G+ PP+ V+ E+ GF ++H YG TE G + C W+P ++LP RA +
Sbjct: 298 VSVITGGAAPPSAVIAAMEARGFRITHAYGMTESYGPSTLCLWQPGVDELPLEARAQFMS 357
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQGV L E ++D +TG V DG+T GE+V+RG ++M GYL +PEAT + DG
Sbjct: 358 RQGVAHPMLEEATVLDTDTGRPVPADGRTLGELVVRGNTVMKGYLHNPEATRAALADGWL 417
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
+TGD+ ++HPDGY+EIKDR+KD+IISGGENISS EIE VLY HP V EAAVV RPD W
Sbjct: 418 HTGDLAVLHPDGYVEIKDRAKDIIISGGENISSLEIEEVLYQHPEVVEAAVVARPDSRWG 477
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E P AFV+L+ TT D++++CR R+ + P+ V + ELPKTATGK+QK+V
Sbjct: 478 ETPHAFVALRADALP---RTTGDDLVRWCRERLAHFKAPRHVT-LTELPKTATGKIQKFV 533
Query: 544 LGDIANS 550
L + A
Sbjct: 534 LREWARQ 540
>gi|13476075|ref|NP_107645.1| acyl-CoA synthetase [Mesorhizobium loti MAFF303099]
gi|14026835|dbj|BAB53431.1| probable AMP-binding protein [Mesorhizobium loti MAFF303099]
Length = 546
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/550 (42%), Positives = 333/550 (60%), Gaps = 18/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PLTPL ++ERAA D +II+ ++ +RR L++AS+L GI
Sbjct: 9 LDRNAANHQPLTPLTYLERAAKTYPDHIAIIHGRQRISYRDFWRRSLKVASALQKRGIGK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ N P M E HF VPM+ A+ +++NTRLDA I+ L H+E+K++ VD S
Sbjct: 69 GDTVTVMLSNTPPMLEAHFGVPMTKAVLHSLNTRLDAAVIAFQLDHAETKVLIVDREFSG 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSS--PPPRIPPADFVDTYENMLAKGDPQFS 181
++ + + L +K LV+ DD + ++ + RI D YE+ +A GD F+
Sbjct: 129 VVRQALDL----AKVTPLVIDYDDPDYAADAPYPKGERIGALD----YEDFVAGGDEDFA 180
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + D + LNYT GTT PKGVV ++ ++A + I + K +V LWTLPMFH
Sbjct: 181 WSMPDDEWDAISLNYTSGTTGNPKGVVYHHRGAALMAYTNTIHAGMAKHAVYLWTLPMFH 240
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQ 299
NGW F W AV T+VCLR ++ I HGVTH+CGAP+V+++L + + +
Sbjct: 241 CNGWCFPWTLAVQAGTHVCLRWVRPKPIYDAIADHGVTHLCGAPVVMSVLINARDEDKRT 300
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+ V TA +PPP VL GF V+H YG TE G V W +W+ L ER+
Sbjct: 301 FAQTVTFNTAAAPPPEAVLSGMADAGFAVTHLYGLTETYGPAVVNEWHGEWDDLAKGERS 360
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+ KARQGVR L + ++DPET + DG+T GE++ RG +M GYLK+ +A+ +
Sbjct: 361 AKKARQGVRYAALEGLTVMDPETMQATPADGETIGEVMFRGNIVMKGYLKNRKASDEAFA 420
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+G+MHPDGY+++KDRSKD+IISGGENISS E+E LY HP V VV R D
Sbjct: 421 GGWFHSGDLGVMHPDGYIQLKDRSKDIIISGGENISSIEVEDALYKHPSVASCGVVARHD 480
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+P A+V LK G + +E +II++CRA + R+ VPK V+F E+PKT+TGK+
Sbjct: 481 DKWGEVPVAYVELKPGKTA-----SEAEIIEHCRALLARFKVPKAVIFA-EIPKTSTGKI 534
Query: 540 QKYVLGDIAN 549
QK+ L ++A
Sbjct: 535 QKFRLREMAK 544
>gi|385206493|ref|ZP_10033363.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. Ch1-1]
gi|385186384|gb|EIF35658.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. Ch1-1]
Length = 543
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/543 (43%), Positives = 319/543 (58%), Gaps = 20/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN P+TP+ FI RAA + ++++ + W +TY R +LAS+L GI
Sbjct: 9 LERREANYIPVTPIDFIVRAAEVYGERLAVVHGEIRRNWRETYERSRRLASALQRAGIER 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PNIP M E HF VPM+GA+ NT+NTRLD ++ +L+H E+K + VD
Sbjct: 69 GDTVAALLPNIPPMIEAHFGVPMAGAVLNTLNTRLDISSLLFMLRHGEAKALIVDTEYGE 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
FP D + IS + + P YE L GDP+F+W
Sbjct: 129 FAHRASLEFP------------DLRVISVADAMPAHADQFIRATDYEAFLQSGDPEFAWT 176
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++ AV ++++W +PK +V LWTLP+FH N
Sbjct: 177 MPADEWDAIALNYTSGTTGDPKGVVYHHRGAYLNAVSNILEWDMPKHAVYLWTLPLFHCN 236
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W A NVCLRKFDA TVF LIR G+TH CGAPIV + L+++P + ++
Sbjct: 237 GWCFPWTVAARAGVNVCLRKFDAKTVFDLIRNEGITHYCGAPIVQSALANAPAEWRDGIN 296
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V + AG+ P V+ + + +GF ++H YG TE G CA + W L RA L
Sbjct: 297 HRVSTMVAGAAPAPAVIAKMKEIGFDLTHVYGLTETYGPAAVCAKQEAWETLDDSARAEL 356
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGVR V ++DP+T V DG+T GEI+ RG M GYLK+ AT + G
Sbjct: 357 NARQGVRYHLQAAVTVLDPQTLALVPNDGETIGEIMFRGNICMKGYLKNERATEAAFEGG 416
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G+ PDGY+ I+DRSKD+IISGGENISS E+E LY HP V AAVV DP
Sbjct: 417 WFHTGDLGVRMPDGYIRIRDRSKDIIISGGENISSIELEDTLYRHPAVAVAAVVAMADPK 476
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK G + ++II +CR + Y +PK V F ELPKT+TGK+QK
Sbjct: 477 WGEVPCAFVELKEGA-----QVSAEEIIAHCRLFLAGYKLPKAVRF-GELPKTSTGKIQK 530
Query: 542 YVL 544
+ L
Sbjct: 531 FEL 533
>gi|424778877|ref|ZP_18205815.1| o-succinylbenzoate--CoA ligase [Alcaligenes sp. HPC1271]
gi|422886306|gb|EKU28730.1| o-succinylbenzoate--CoA ligase [Alcaligenes sp. HPC1271]
Length = 550
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/542 (43%), Positives = 330/542 (60%), Gaps = 21/542 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIY----NDTTYTWSQTYRRCLQLASSLSSFGINPG 64
AN L+PL FIER+A D P+++Y N +WSQ Y R QL S+LS G+ G
Sbjct: 14 ANYRVLSPLDFIERSAFVYPDYPALVYGPAQNGIKMSWSQLYARTRQLGSALSKAGVGKG 73
Query: 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V+V+ PN P M + HF VPM GA+ NT+NTRLDA TI+ +L H E++ V VD +++
Sbjct: 74 DTVAVMLPNTPPMVQAHFGVPMCGAVLNTLNTRLDASTIAYMLDHGEARAVLVDSEFAAV 133
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
+ E +SL SK P LV+ D + + RI TYE + GDP + W
Sbjct: 134 MKEALSL--RESKEPILVIDVVDNYFDTGAE---RIGS----QTYEEFVDGGDPDYDWQL 184
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
P ++ D + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPMFH NG
Sbjct: 185 PANEWDAIALNYTSGTTGKPKGVVYHHRGAYLGALSNVLEWDMPKHAVYLWTLPMFHCNG 244
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLDR 302
W+F W A NVCLRK +A + + +GVTH CGAPIV +LL +S EA +L +
Sbjct: 245 WTFPWVIAARAGVNVCLRKVEAQAMVDNMVDYGVTHYCGAPIVHSLLVNSDEALKSRLPK 304
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
V + AG+ PPA ++ E +GF ++H YG TE G CA W++L +ERA
Sbjct: 305 GVSAMVAGAAPPATMIEGMERMGFALTHVYGLTETYGPASVCAQHAPWSELDIQERAQRN 364
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
ARQGVR V +++P+T V DG+T GEI+ RG M GYLK+ +AT + + G
Sbjct: 365 ARQGVRYHLQGGVQVLNPQTMEPVPADGETMGEIMFRGNITMKGYLKNAQATQESLGGGW 424
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
++TGD+ + PDGY+ IKDRSKD+IISGGENISS EIE V+Y HP V AAVV +PD W
Sbjct: 425 FHTGDLAVCEPDGYVRIKDRSKDIIISGGENISSIEIEDVMYRHPAVQAAAVVAQPDERW 484
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E P +V L+ G + T +++ +CR + + +P+ F+ ELPKTATGK+QK+
Sbjct: 485 GEAPHVYVELRPGAE-----VTVEELRAHCRQYLAGFKIPRHFSFM-ELPKTATGKIQKF 538
Query: 543 VL 544
L
Sbjct: 539 AL 540
>gi|260427951|ref|ZP_05781930.1| AMP-dependent synthetase and ligase [Citreicella sp. SE45]
gi|260422443|gb|EEX15694.1| AMP-dependent synthetase and ligase [Citreicella sp. SE45]
Length = 541
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/545 (41%), Positives = 324/545 (59%), Gaps = 20/545 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTPL F+ RA D +++Y T+++ + R +LAS+L+ G+ PG VV+
Sbjct: 15 ANYVPLTPLSFLHRARQVYPDHMAVVYGPHRKTYAEYHERVSRLASALAKIGVEPGDVVA 74
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
I PNIPA E HF VP GA+ N INTRLD TI+ IL H E+K+V D L E
Sbjct: 75 TILPNIPAQAEAHFGVPACGAVLNAINTRLDIDTIAYILDHGEAKVVLCDPQFIPHLAEA 134
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
+ + P V+ D + + D+++ YE+ LA GDP F+W+ P+ +
Sbjct: 135 MERM---EQDPPTVIEVADPHGGAKAF-------GDYLE-YEDFLATGDPHFTWIMPEDE 183
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
+ + LNYT GTT PKGVV ++ ++ A+ ++ W + V L +P+FH NGW T
Sbjct: 184 WESLALNYTSGTTGRPKGVVYHHRGAYLNAMGQVLSWRMVLHPVYLTIVPLFHCNGWCHT 243
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLDRPVRI 306
W VG T VC R A ++ I GVTH GAPIVLN++ + E + + V +
Sbjct: 244 WMMPAVGGTVVCCRDIAAHNIYDAIADEGVTHFGGAPIVLNMIVNAREEEKRSFEHVVEV 303
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
TAG+PP L + E++GF V+ YG TE G +V CAW+ W+ + ERA++KARQG
Sbjct: 304 FTAGAPPAPATLAKIETMGFNVTQVYGLTETYGPDVECAWQGTWDHIKGDERAAMKARQG 363
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
V + V ++D + + ++ DG+T+GEI+ RG +M GYLK P+AT + G +++G
Sbjct: 364 VAMPFMEHVTVMDEQMNI-IEADGETKGEIMHRGNGVMKGYLKAPKATREAFDGGYFHSG 422
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+ ++HPD YL+I DR+KD+IISGGENISS E+E+ L +H V AVV +PD W E+P
Sbjct: 423 DIAVLHPDSYLQIADRAKDIIISGGENISSVEVENTLMAHEAVLLCAVVAKPDKKWGEVP 482
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546
CAFV LK G + TE ++I + R R+ + PK VVF +ELPKT+TGK+QK+ L
Sbjct: 483 CAFVELKPGHAA-----TEAELIAFARDRLAGFKTPKAVVF-EELPKTSTGKIQKFQLRS 536
Query: 547 IANSM 551
A +
Sbjct: 537 RAREL 541
>gi|83941297|ref|ZP_00953759.1| AMP-binding protein [Sulfitobacter sp. EE-36]
gi|83847117|gb|EAP84992.1| AMP-binding protein [Sulfitobacter sp. EE-36]
Length = 541
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/547 (41%), Positives = 322/547 (58%), Gaps = 24/547 (4%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L AN PLTPL ++RAA D ++IY +++Q + RC QLAS+L + G+
Sbjct: 8 DGLDKCAANYVPLTPLSHLKRAAHVFADVTAVIYGAHRVSYAQYHARCSQLASALVAAGV 67
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
PG VV+ I PNIPA E HF VP GA+ NTINTRLD T+ IL H E++++ VD
Sbjct: 68 EPGQVVATILPNIPAQAEAHFGVPACGAVLNTINTRLDVGTVGYILDHGEARVLLVDTQF 127
Query: 122 SSLLLEVVSLF--PPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
L + PP P L+ + D P P TY++ +A GDP
Sbjct: 128 VDLAEAACATLDGPP----PLLIEVPD---------PAAGFPATGRHTTYDDFIATGDPA 174
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F+W+ P+ + + + LNYT GTT PKGVV ++ +++ + +++ W + + V + +P+
Sbjct: 175 FNWIMPQDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVVSWRMVMRPVFMQIVPL 234
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW+ TW ++G T VC R A ++ I GVTH GAPIVLN++ ++ EA++
Sbjct: 235 FHCNGWNHTWMMPLLGGTLVCCRDITAAAIYDAIADEGVTHFGGAPIVLNMMVNATEAER 294
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
D V + TAG+PP L + E+LGF V+ YG TE G C W P W+ E
Sbjct: 295 RAFDHQVEVFTAGAPPAPATLSKIEALGFNVTQVYGLTETYGHVTECLWDPAWDSAQGAE 354
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
RA++KARQGV + E+ ++D E V D T+GEI++RG S+M GY K+P AT
Sbjct: 355 RAAIKARQGVAMPMMEEITVMDSEMA-QVPLDAATQGEIMIRGNSVMKGYFKNPAATRAA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G +++GD+ + HP+G+++I DR+KD+IISGGENISS E+E VL HP VN AAVV +
Sbjct: 414 FAGGYFHSGDLAVQHPNGHMQIADRAKDIIISGGENISSVEVEGVLMGHPDVNLAAVVAQ 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD W E+PCAFV LK G E +I + R + + PK VVF ELPKT+TG
Sbjct: 474 PDEKWGEVPCAFVELKPGRSG-----DEAALIAFARDTLAGFKAPKRVVF-QELPKTSTG 527
Query: 538 KVQKYVL 544
K+QK+ L
Sbjct: 528 KIQKFEL 534
>gi|149923644|ref|ZP_01912041.1| acyl-CoA synthase [Plesiocystis pacifica SIR-1]
gi|149815511|gb|EDM75047.1| acyl-CoA synthase [Plesiocystis pacifica SIR-1]
Length = 559
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/561 (42%), Positives = 341/561 (60%), Gaps = 19/561 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTT----YTWSQTYRRCLQLASSLSSF 59
L NPAN PLTPL F+ R A + P+I++ +T+++ Y +LAS+L++
Sbjct: 11 LDKNPANHQPLTPLNFLARTAETFPEHPAILHAGARAKQRWTYAEYYADARRLASALAAR 70
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
GI G V+ + N P M HF VPM+GA+ N +N RLDAR I+ L H E+K + V+
Sbjct: 71 GIGRGDTVAAMLLNTPPMLLAHFGVPMAGAVLNCLNVRLDARIIAFSLDHGEAKAILVER 130
Query: 120 LSSSLLLEVVSLFPPHSKTPK-LVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP 178
++++ E ++L + P+ LV+ D + ++ P + + +LA+GDP
Sbjct: 131 ELATVVREALALM----EGPRPLVIDYVDPTVDYAAIEGAPDPFGEL--EFAELLAEGDP 184
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
F WVRP + D + LNYT GTT PKGVV ++ +++A +++ + K V LWTLP
Sbjct: 185 AFDWVRPLDEWDAIALNYTSGTTGDPKGVVFHHRGAYLLATGNVVTTGMTKHPVYLWTLP 244
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA- 297
MFH NGW F W A+V T+VCLR ++ + H VTHMCGAPIV+ ++S + +A
Sbjct: 245 MFHCNGWCFPWSLAIVAGTHVCLRAVRDAAIWDAVADHEVTHMCGAPIVMAVISGAADAI 304
Query: 298 -KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
+ LDR V TAG+PPP VL + GF V+H YG TE G V WK W+ L
Sbjct: 305 KRPLDRVVEFFTAGAPPPEAVLATMAAGGFNVTHLYGLTESYGPAVVNDWKASWDALDPG 364
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
RA++KARQGVR L ++ ++DPET V DG+T GE++MRG +M GYLK+P AT +
Sbjct: 365 PRAAMKARQGVRYQALEQLTVMDPETMTEVAADGETLGEVMMRGNVIMKGYLKNPAATQR 424
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
G ++TGD+G+MHPDGY+++KDRSKD+IISGGENISS E+E LY HP + AAVV
Sbjct: 425 AFAQGWFHTGDLGVMHPDGYVQLKDRSKDIIISGGENISSIEVEDALYKHPAIAAAAVVA 484
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
P W E PCAFV L+ G + + +++I + R ++ + P+ VVF ELPKT+T
Sbjct: 485 MPHGKWGETPCAFVELRAGQE-----LSAEEVIAWSREQLAHFKCPRHVVF-GELPKTST 538
Query: 537 GKVQKYVLGDIANSMSMSHSR 557
GK+QK+ L + A ++ + S
Sbjct: 539 GKIQKFKLRERARGLASAPSE 559
>gi|114771223|ref|ZP_01448643.1| acyl-CoA synthase [Rhodobacterales bacterium HTCC2255]
gi|114548148|gb|EAU51035.1| acyl-CoA synthase [Rhodobacterales bacterium HTCC2255]
Length = 533
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/545 (41%), Positives = 326/545 (59%), Gaps = 22/545 (4%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D + N AN L+PL FI+R A D ++IY Y+WSQ Y+R +QLAS+L+ G+
Sbjct: 5 DDFEKNSANHAALSPLSFIKRTALMFPDRDAVIYESRNYSWSQLYKRSIQLASALNKNGV 64
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
G V+++A N P M E HF +PMSGA+ NTINTRLD+ TI+ IL H E+K+ VD
Sbjct: 65 GKGDTVAILAANTPEMIEAHFGIPMSGAVLNTINTRLDSDTIAYILDHGEAKVFIVDGEL 124
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
+ E + + VL+ D ++ + +P RI D Y + + G+ +
Sbjct: 125 APQAAEAIK--------GRDVLVVDIADLQDNPNPN-RIGTID----YSDFIKLGNESAN 171
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + D + LNYT G+T PKGVV ++ +++++ + DW +P+ L+T+P+FH
Sbjct: 172 WEMPTDEWDAIALNYTSGSTGRPKGVVYHHRGAYLMSMGVISDWGLPRHPKYLYTVPLFH 231
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQ 299
NGW W A + T VC R ++ I +HG++H GAPIVL ++ ++ + K+
Sbjct: 232 CNGWCHGWAMAALAGTIVCTRAITPAVIYNAISEHGISHFGGAPIVLGMILNANDNDRKK 291
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+ V ++TAG+PPPA VL E LGF V+ YG TE G V W W+ LP +RA
Sbjct: 292 FNYTVNVMTAGAPPPAAVLEGIEKLGFNVTQVYGLTETYGHTVMSTWNSDWDDLPQDQRA 351
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+K+RQG + + +VDP G+ V DG+T GEI++RG ++M GYLK+P+ATS+
Sbjct: 352 IMKSRQGAGMVHTDGLRVVDP-NGIDVPADGETFGEILIRGNTVMKGYLKNPKATSEAFA 410
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
DG + + D+ +MH +GY+E+KDR KD+IISGGENISS E+E +L+ H V AAVV D
Sbjct: 411 DGWFRSEDLAVMHANGYVEVKDRLKDIIISGGENISSVEVEGILHRHEAVALAAVVAMKD 470
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+PCAF+ LK G TE +II +CR + + PK VVF LPKTATGK+
Sbjct: 471 EKWGEVPCAFIELKDGKS-----VTENEIISFCRDHLAGFKRPKKVVF-GVLPKTATGKI 524
Query: 540 QKYVL 544
QKY L
Sbjct: 525 QKYEL 529
>gi|126740722|ref|ZP_01756408.1| AMP-dependent synthetase and ligase [Roseobacter sp. SK209-2-6]
gi|126718237|gb|EBA14953.1| AMP-dependent synthetase and ligase [Roseobacter sp. SK209-2-6]
Length = 542
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/546 (41%), Positives = 321/546 (58%), Gaps = 21/546 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTPL ++RAA D P++IY +++ + RC +LAS L+ G+ G VV+
Sbjct: 15 ANYVPLTPLAHLQRAAQVFPDHPAVIYGKQRINYAEYHARCSRLASGLAQLGVKSGDVVA 74
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PN+PA E HF VP GA+ NTINTRLD T++ I H E+K+ VD L L
Sbjct: 75 TLIPNLPAQAEAHFGVPACGAVLNTINTRLDVSTVAYIFDHGEAKVALVD--PQFLELAE 132
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
++ P L+ + DD P TY ++LA+GDP+F W+ P+ +
Sbjct: 133 AAIEEMEGPAPILIEVADD---------PAGWHATGRHKTYVDLLAEGDPEFDWILPQDE 183
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
+ + LNYT GTT PKGVV ++ +++ + +++ W + + V L +P+FH NGW+ T
Sbjct: 184 WESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVVSWRMVQHPVYLTIVPLFHCNGWNHT 243
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS--PEAKQLDRPVRI 306
W ++G T VC R A V+ I GVTH GAPIVLN++ ++ E + D V +
Sbjct: 244 WMMPLLGGTLVCCRDVSAQNVYNAIHYEGVTHFGGAPIVLNMIVNALDEERRTFDHQVEV 303
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPK-WNKLPARERASLKARQ 365
TAG+PP L + E LGF ++H YG TE G C WK + W L A+ KARQ
Sbjct: 304 FTAGAPPAPATLAKIEDLGFNITHVYGLTETFGHVTECYWKAQDWADLDQAGIAAKKARQ 363
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYT 425
GV + + E +V + DGQ++GEI +RG ++M GYLK+PEAT++ K G + +
Sbjct: 364 GV-AMPMMEPVVVRGSDHEILPMDGQSQGEIALRGNTVMKGYLKNPEATAEAFKGGYFNS 422
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+ + H DGY++I DR+KD+IISGGENISS E+E VL HP VN AAVV +PD W E+
Sbjct: 423 GDLAVQHADGYIQIADRAKDIIISGGENISSVEVEGVLMGHPAVNLAAVVAKPDEKWGEV 482
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLG 545
PCAFV LK G E ++I + R + + PK V+F ELPKT+TGK+QK+ L
Sbjct: 483 PCAFVELKAGK-----TLEEAELIAFSRETLAGFKAPKQVIF-QELPKTSTGKIQKFELR 536
Query: 546 DIANSM 551
IA ++
Sbjct: 537 GIAKAL 542
>gi|416988389|ref|ZP_11938604.1| acyl-CoA synthetase [Burkholderia sp. TJI49]
gi|325518846|gb|EGC98417.1| acyl-CoA synthetase [Burkholderia sp. TJI49]
Length = 550
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 244/550 (44%), Positives = 334/550 (60%), Gaps = 32/550 (5%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTP+ F+ RAA + +I++ D TW +TY R +LAS+L++ G+ G V+
Sbjct: 14 ANYVPLTPIDFLVRAAEVYGERLAIVHGDVRRTWGETYARARRLASALAAAGVARGETVA 73
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----HLSSSL 124
+ PNIPAM E HF VPM+GA+ NTINTRLD ++ +L+H E+K++ VD L+
Sbjct: 74 AMLPNIPAMVEAHFGVPMAGAVLNTINTRLDIASVLFMLRHGEAKVLIVDTEYAALAHRA 133
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADF--VDTYENMLAKGDPQFSW 182
LEV L K +S + + P PA F YE LA GDP ++W
Sbjct: 134 ALEVPGL----------------KIVSVADAMPA--DPACFGGATDYEAFLAGGDPDYAW 175
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P + D + LNYT GTT PKGVV ++ ++ A+ ++++W +PK +V LWTLPMFH
Sbjct: 176 TPPADEWDAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMPKHAVYLWTLPMFHC 235
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--L 300
NGW F W A NVCLRKFDA TVF LIR+ +TH CGAPIV + ++++P + +
Sbjct: 236 NGWCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERITHYCGAPIVQSAIANAPAELRAGI 295
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
+ V + AG+ P V+ + + +GF + H YG TE+ G CA + W++L ERA
Sbjct: 296 EHKVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAKQAHWDELSDDERAR 355
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
L ARQGVR ++DP+T V DG+T GEI+ RG M GYLK+P AT +
Sbjct: 356 LNARQGVRYHLEAGATVLDPDTMTQVPADGETLGEIMFRGNICMKGYLKNPHATDEAFHG 415
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+ ++ PDGY+ IKDR KD+IISGGENISS E+E LY HP V AAVV PDP
Sbjct: 416 GWFHTGDLAVLMPDGYIRIKDRKKDIIISGGENISSIEVEDALYRHPAVAVAAVVAMPDP 475
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV L+ G + TE +I+ +CR + + VPK V F ELPKT+TGK+Q
Sbjct: 476 KWGEVPCAFVELREGASA-----TEAEIVAHCRQLLAGFKVPKVVRF-GELPKTSTGKIQ 529
Query: 541 KYVLGDIANS 550
K+ L + S
Sbjct: 530 KFQLRNAVGS 539
>gi|357418197|ref|YP_004931217.1| AMP-dependent synthetase and ligase [Pseudoxanthomonas spadix
BD-a59]
gi|355335775|gb|AER57176.1| AMP-dependent synthetase and ligase [Pseudoxanthomonas spadix
BD-a59]
Length = 544
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 242/554 (43%), Positives = 336/554 (60%), Gaps = 22/554 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ N AN PL+PL F+ +AA ++I+ TW + YRRC QLAS+L +G+
Sbjct: 10 LERNQANYTPLSPLSFLRKAALLHPQRVALIHGPRRLTWGEEYRRCRQLASALQRWGVGR 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+ + PN PAM+ELH+ M GA+ NT+NTRLDA TI+ +L ++E+K++ VD +
Sbjct: 70 GDTVAAMLPNTPAMFELHYGPAMLGAVLNTLNTRLDAPTIAFMLDYAEAKVLLVDREFAP 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQFS 181
++ + + L + P V+ DD E+++ DFV YE +A GD
Sbjct: 130 VIAQALKL----CRQPPRVVDVDDAEVTA----------GDFVGEIEYEAFIAGGDAALE 175
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
P + D + LNYT GTT PKGVV ++ ++ AV ++IDW +P V LWTLPMFH
Sbjct: 176 MALPDDEWDAISLNYTSGTTGDPKGVVYHHRGAYLNAVANIIDWSMPPHPVYLWTLPMFH 235
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA-KQL 300
NGW F W A V T VCLR+F+ V L+R+H VTH CGAPIV + L ++PE K
Sbjct: 236 CNGWCFPWTMAAVAGTQVCLRRFEPRHVLELMREHRVTHYCGAPIVHSALVAAPEEWKHG 295
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
V AG+ PPA V+ E +GF ++H YG TE G C K +W+ L + RA
Sbjct: 296 ISGVHAQVAGAAPPAAVIEGMERMGFHITHVYGLTETYGPASLCQQKEEWSALDIQARAD 355
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
L +RQGV + ++ ++DP+T V DGQT GEI+ RG M GYLK+P+AT++ +
Sbjct: 356 LNSRQGVACLLQEDMQVLDPQTLQPVPWDGQTIGEIMFRGNITMKGYLKNPDATARAFEG 415
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+ ++ PDGY++I+DRSKDVIISGGENISS E+E L HP V AAVV RPD
Sbjct: 416 GWFHTGDLAVVDPDGYVKIRDRSKDVIISGGENISSIEVEDALCRHPAVMAAAVVARPDE 475
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E PCAF+ LK G++ + QYCR + + VP+ VF ELP+T+TGKVQ
Sbjct: 476 KWGETPCAFIELKAGSEP----LPADALQQYCRTHLAGFKVPRAFVF-GELPRTSTGKVQ 530
Query: 541 KYVLGDIANSMSMS 554
K++L + A +S S
Sbjct: 531 KFLLRERARDLSGS 544
>gi|384917797|ref|ZP_10017906.1| AMP-dependent synthetase and ligase [Citreicella sp. 357]
gi|384468329|gb|EIE52765.1| AMP-dependent synthetase and ligase [Citreicella sp. 357]
Length = 541
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/538 (42%), Positives = 324/538 (60%), Gaps = 20/538 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTPL F++RA D +++Y T+++ +RR +LAS+L+ G+ PG VV+
Sbjct: 15 ANYVPLTPLSFLKRAVQVWPDHLAVVYGPHRKTYAEYHRRVSRLASALTRIGVAPGDVVA 74
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PNIPA E HF VP GA+ N INTRLD TI+ IL H E+++V D L E
Sbjct: 75 TLLPNIPAQAEAHFGVPACGAVLNAINTRLDVDTIAYILDHGEARVVLCDPQFIPHLAEA 134
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
+ L + P V+ D + + D+++ YE+ L GDP F W+ P+ +
Sbjct: 135 LELM---EQDPPAVIEVADPHGGAHAF-------GDYME-YEDFLQTGDPDFDWILPEDE 183
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
+ + LNYT GTT PKGVV ++ ++ A+ ++ W + V L +P+FH NGW T
Sbjct: 184 WESLALNYTSGTTGRPKGVVYHHRGAYLNAMGQVLSWRMVLHPVYLTIVPLFHCNGWCHT 243
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDRPVRI 306
W VG T VC R A ++ I HGVTH GAPIVLN+L ++ E+ + D+ V +
Sbjct: 244 WMMPAVGGTVVCCRDITARNIYDAIADHGVTHFGGAPIVLNMLVNAAESDRRPFDQLVEV 303
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
TAG+PP L + E++GF V+ YG TE G +V CAW+ W+ L ERA+ KARQG
Sbjct: 304 FTAGAPPAPATLAKIETMGFNVTQVYGLTETYGPDVECAWQGGWDHLQGEERAARKARQG 363
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
V + V +VD + V DG T+GEI+ RG +M GYLK P+AT + + G +++G
Sbjct: 364 VAMPFMEHVTVVD-DAMRPVTPDGDTKGEIMHRGNGVMKGYLKAPKATREAFQGGYFHSG 422
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+ +++PD YL+I DR+KD+IISGGENISS E+E+ L +H V AVV +PD W E+P
Sbjct: 423 DIAVLYPDSYLQIADRAKDIIISGGENISSVEVENTLMAHEAVLLCAVVAKPDDTWGEVP 482
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
CAFV LK + TE ++I + R R+ + PK VVF +ELPKT+TGK+QK+VL
Sbjct: 483 CAFVELKPQHTA-----TEAELIGFARQRLAGFKTPKRVVF-EELPKTSTGKIQKFVL 534
>gi|407778401|ref|ZP_11125665.1| AMP-dependent synthetase and ligase [Nitratireductor pacificus
pht-3B]
gi|407299772|gb|EKF18900.1| AMP-dependent synthetase and ligase [Nitratireductor pacificus
pht-3B]
Length = 547
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/551 (41%), Positives = 332/551 (60%), Gaps = 16/551 (2%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN LTPL +ERAA + +II+ +T++Q + R L+LAS+L+ GI
Sbjct: 10 LDKNPANHQALTPLVLLERAAKVFPERTAIIHGAARFTYAQFWERSLKLASALARHGIGR 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ N P M E H VPM+ A+ +++NTRLDA ++ L H+ES++V VD S
Sbjct: 70 GDTVTVMLSNTPPMLEAHHGVPMTKAVLHSLNTRLDAAVLAFQLDHAESRVVIVDREFSG 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPP-PRIPPADFVDTYENMLAKGDPQFSW 182
++ E ++L S TP ++ D + + RI D YE+ +A GD F+W
Sbjct: 130 VMKEALALA---SVTPLVIDYDDPDYPADAPYAKGERIGGID----YEDFVASGDGGFAW 182
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P + D + LNYT GTT PKGVV ++ ++A + + + + V LWTLPMFH
Sbjct: 183 SMPDDEWDAISLNYTSGTTGNPKGVVYHHRGAALMAYANTVHAGLGRHPVYLWTLPMFHC 242
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--L 300
NGW F W A+ G +VCLR A ++ I HGVTH+CGAP+V++ L ++P+A++
Sbjct: 243 NGWCFPWTLALTGGVHVCLRWVRAGAMYDAIADHGVTHLCGAPVVMSALLNAPDAEKRAF 302
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
+ V TA +PPP VL GF V+H YG TE G V WK W+ L +A+
Sbjct: 303 TQTVVFNTAAAPPPESVLSGMAEAGFQVTHLYGLTETYGPAVVNEWKEDWDGLDGAGQAA 362
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
KARQGVR L + ++DPET DG+T GE++ RG +M GYLK+ A+ +
Sbjct: 363 RKARQGVRYAALEGLTVMDPETMEPTPADGETIGEVMFRGNIVMKGYLKNRAASDEAFAG 422
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +++GD+G+MHPDGY+++KDRSKD+IISGGENISS E+E LY HP V VV + D
Sbjct: 423 GWFHSGDLGVMHPDGYIQLKDRSKDIIISGGENISSIEVEDALYKHPAVAACGVVAKADE 482
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E P AFV LK G + +E++++ +CRA + R+ PK +VF E+PKT+TGK+Q
Sbjct: 483 KWGETPVAFVELKPGRTA-----SEEELLDHCRAHLARFKCPKGIVF-SEIPKTSTGKIQ 536
Query: 541 KYVLGDIANSM 551
K+ L ++A ++
Sbjct: 537 KFRLREMARAL 547
>gi|392952437|ref|ZP_10317992.1| acyl-CoA synthetase [Hydrocarboniphaga effusa AP103]
gi|391861399|gb|EIT71927.1| acyl-CoA synthetase [Hydrocarboniphaga effusa AP103]
Length = 541
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/543 (43%), Positives = 338/543 (62%), Gaps = 19/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L +PAN PL+PL FIER A SIIY +T WSQTY RC +LAS+L GI
Sbjct: 11 LDRSPANYVPLSPLSFIERTAAVYPQRTSIIYGETRQVWSQTYARCRRLASALERRGIGR 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PN P M E HF VPM GA+ NT+NTRLDA I+ +L+H E++++ D S
Sbjct: 71 GDTVAVMLPNTPPMIEAHFGVPMLGAVLNTLNTRLDAEAIAFMLEHGEARVLITDCEFSP 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + +++ + LV+ D I + +D YE +LA+GDP ++W
Sbjct: 131 VVSKALAML---GERRPLVIDVRDPHIDGGET-------LGALD-YEALLAEGDPGYAWS 179
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + + LNYT GTT PKGVV ++ + ++ +++ W +P +V LWTLPMFH N
Sbjct: 180 LPQDEWEAIALNYTSGTTGNPKGVVYHHRGAHLNSIANIVTWGMPAHAVYLWTLPMFHCN 239
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W A T+VCLR+ D +F LI++H VTH CGAPIV ++L ++PE+ + L
Sbjct: 240 GWCFPWTLAANAGTHVCLRRVDPVLIFELIKQHRVTHFCGAPIVHSMLINAPESSRQGLG 299
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + AG+ PPA ++ E +G ++H YG TE G CA +P+W LP E+A
Sbjct: 300 HPVAAMIAGAAPPAAIIEGMERIGVSITHAYGLTETYGPAAICARQPEWETLPLPEKAER 359
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGV + ++DP+T V DG+T GEI+ RG +M GYLK+P AT + + G
Sbjct: 360 HARQGVPNHLQQAMAVLDPQTMQPVPADGETMGEIMFRGNIVMKGYLKNPTATEESLAGG 419
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+ ++ DGY++I+DRSKDVIISGGENISS E+E LY HP V AAVV + D
Sbjct: 420 WFHSGDLAVVQSDGYVKIRDRSKDVIISGGENISSIEVEDALYRHPAVMAAAVVAKLDDK 479
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCA V L+ G+ T ++++++CR + R+ VP+ VV I LPKT+TGK+QK
Sbjct: 480 WGEVPCACVELREGS-----TVTPEELVEHCRRYLARFKVPRHVV-IGPLPKTSTGKIQK 533
Query: 542 YVL 544
++L
Sbjct: 534 FLL 536
>gi|254467211|ref|ZP_05080622.1| AMP-dependent synthetase and ligase [Rhodobacterales bacterium Y4I]
gi|206688119|gb|EDZ48601.1| AMP-dependent synthetase and ligase [Rhodobacterales bacterium Y4I]
Length = 542
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/551 (41%), Positives = 323/551 (58%), Gaps = 21/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN PLTPL ++RAA D ++ Y T+++ + RC +LAS L+ G+ P
Sbjct: 10 LEKTAANYVPLTPLSHLQRAAQVFPDHLAVSYGKHRKTYAEYHERCTRLASGLARLGVKP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+ + PNIPA E HF VP GA+ NTINTRLD T++ I +H E+K V VD
Sbjct: 70 GDVVATLLPNIPAQAEAHFGVPACGAVLNTINTRLDTGTVAYIFEHGEAKAVLVD--PQF 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L L ++ P L+ + DD+ ++ YE +LA GDP F WV
Sbjct: 128 LELAEAAVEEMEGPAPILIEVADDQATWHATGRHME---------YEALLASGDPDFQWV 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + + LNYT GTT PKGVV ++ +++ + +++ W + V L +P+FH N
Sbjct: 179 MPEDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVVSWRMVLHPVYLTIVPLFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS--PEAKQLD 301
GW+ TW +VG T VC R A ++ I GVTH GAPIVLN+L ++ E + D
Sbjct: 239 GWNHTWMMPLVGGTLVCCRDISAQNIYNAIHYEGVTHFGGAPIVLNMLVNALDEERRTFD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKP-KWNKLPARERAS 360
V + TAG+PP L + E+LGF ++H YG TE G C WK +W+ L A+
Sbjct: 299 HTVEVFTAGAPPAPATLSKIENLGFNITHVYGLTETFGHVTECYWKAAEWDGLDKAGIAA 358
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
K+RQGV L V + D E + + DGQ++GEI +RG +M GYLK+P+AT++ K
Sbjct: 359 KKSRQGVAMPMLEPVVVRDSEHNV-LPMDGQSQGEIALRGNVVMKGYLKNPDATAEAFKG 417
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G + +GD+ + HPDGY++I DR+KD+IISGGENISS E+E VL +HP V AAV PD
Sbjct: 418 GYFNSGDLAVQHPDGYIQIADRAKDIIISGGENISSVEVEGVLMAHPDVLLAAVAAMPDE 477
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV LK G T E +I + R + + PK VVF ELPKT+TGK+Q
Sbjct: 478 KWGEVPCAFVELKPGAS-----TDEAALIAFSRETLAGFKAPKKVVF-QELPKTSTGKIQ 531
Query: 541 KYVLGDIANSM 551
K+ L IA ++
Sbjct: 532 KFELRKIAKNL 542
>gi|72384228|ref|YP_293582.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
gi|72123571|gb|AAZ65725.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
Length = 551
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/551 (41%), Positives = 331/551 (60%), Gaps = 20/551 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L+ +P N PLTP+ F+ R A + +I Y + +W R +LAS+L + G+
Sbjct: 9 DGLERSPVNFVPLTPISFLRRTAEVYPERTAIAYGERRTSWRAMLDRSRRLASALVAAGV 68
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
G V+V+A N P M E+HF VPMSGA+ NT+N RLDA I+ +L+H+++K++ D
Sbjct: 69 RTGDTVAVMAANTPEMLEMHFGVPMSGAMLNTLNVRLDAAAIAFMLRHADAKVLVTDTEY 128
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
+ ++ ++L LV+ D + R+ + YE LA GDP +
Sbjct: 129 ADVVQAALALL----DDKPLVIDIIDPAVEGGR----RLAEIE----YEGFLAGGDPHWE 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
P + + LNYT GTT PKGVV ++ ++ A+ +++DW +P+ +V LWTLP+FH
Sbjct: 177 GGEPVDEWQAIALNYTSGTTGNPKGVVYHHRGAYLAALSNMLDWGMPRHAVFLWTLPLFH 236
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
NGW F W A T++CLR+ DA V IR+H VTH CGAPIV +L+ +PEA +
Sbjct: 237 CNGWCFAWTLAANAGTSICLRRVDAAAVLDAIREHQVTHYCGAPIVHAMLAHAPEAWKAG 296
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+D PV L G+PPP PV+ +G ++ YG TE+ G C +P+W+ L A
Sbjct: 297 IDHPVHGLIGGAPPPMPVIEGLLRMGIRITQIYGLTEVYGPAAVCVEQPEWDDLGIDALA 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
K RQGVR + ++DPET + V D +T GE++ RG M GYLK+PEAT++
Sbjct: 357 ERKGRQGVRYTAQEGMAVLDPETLVPVPWDAKTIGEVMFRGNMTMKGYLKNPEATAEAFA 416
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+ ++ PDGY++I+DRSKDVIISGGENI+S E+E VLY HP V AAVV +PD
Sbjct: 417 GGWFHSGDLAVVCPDGYVQIRDRSKDVIISGGENINSLEVEEVLYRHPAVRVAAVVAQPD 476
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E PCAFV + G G E+++I++CRA + + PK VV I LP+T+TGK+
Sbjct: 477 ERWGETPCAFVEVVDGARVG-----ERELIEHCRAHLAHFKAPKKVV-IGHLPRTSTGKI 530
Query: 540 QKYVLGDIANS 550
QK++L A+S
Sbjct: 531 QKFLLRQRASS 541
>gi|337270199|ref|YP_004614254.1| AMP-dependent synthetase and ligase [Mesorhizobium opportunistum
WSM2075]
gi|336030509|gb|AEH90160.1| AMP-dependent synthetase and ligase [Mesorhizobium opportunistum
WSM2075]
Length = 546
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/548 (41%), Positives = 325/548 (59%), Gaps = 14/548 (2%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PLTPL ++ERAA D +II+ ++ +RR L+LAS+L GI
Sbjct: 9 LDKNAANHQPLTPLTYLERAAKTYPDHVAIIHGRQRISYRDFWRRSLKLASALQKRGIGK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ N P M E HF VPM+ A+ +++NTRLDA I+ L H+E+K++ VD S
Sbjct: 69 GDTVTVMLSNTPPMLEAHFGVPMTKAVLHSLNTRLDAAVIAFQLDHAETKVLIVDREFSG 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ + + L + K + D + RI D YE+++A GD F+W
Sbjct: 129 VVGQALEL--ANVKPLVIDYDDPDYAADAPYPKGERIGALD----YEDLVAGGDADFAWS 182
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++A + I + K +V LWTLPMFH N
Sbjct: 183 MPDDEWDAISLNYTSGTTGNPKGVVYHHRGAALMAYTNTIHAGMAKHAVYLWTLPMFHCN 242
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLD 301
GW F W AV T+VCLR ++ I HGVTH+CGAP+V+++L + + +
Sbjct: 243 GWCFPWTMAVQAGTHVCLRWVRPKPIYDAIADHGVTHLCGAPVVMSVLINARDEDKRTFA 302
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+ V TA +PPP VL GF V+H YG TE G V W +W+ L ER++
Sbjct: 303 QTVTFNTAAAPPPEAVLSGMADAGFAVTHLYGLTETYGPAVVNEWHGEWDGLAKGERSAK 362
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR L + ++DPET DG+T GE++ RG +M GYLK+ +A+ + G
Sbjct: 363 KARQGVRYAALEGLTVMDPETMRMTPADGETIGEVMFRGNIVMKGYLKNRKASDEAFAGG 422
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G+MHPDGY+++KDRSKD+IISGGENISS E+E LY H V VV R D
Sbjct: 423 WFHSGDLGVMHPDGYIQLKDRSKDIIISGGENISSIEVEDALYKHSSVASCGVVARADDK 482
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+P A+V LK G + TE +II++CR + R+ VPK V+F E+PKT+TGK+QK
Sbjct: 483 WGEVPIAYVELKPGKSA-----TEAEIIEHCRGLLARFKVPKAVIFA-EIPKTSTGKIQK 536
Query: 542 YVLGDIAN 549
+ L ++A
Sbjct: 537 FRLREMAK 544
>gi|338740667|ref|YP_004677629.1| AMP-dependent synthetase/acyl-CoA ligase [Hyphomicrobium sp. MC1]
gi|337761230|emb|CCB67063.1| putative AMP-dependent synthetase/acyl-CoA ligase [Hyphomicrobium
sp. MC1]
Length = 541
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/549 (40%), Positives = 328/549 (59%), Gaps = 19/549 (3%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L NPAN PLTPL F+ R+A A + +II+ + ++++ Y RC +LA +L+ I
Sbjct: 8 HLDKNPANYQPLTPLSFLPRSAIAAPNHTAIIHGNARISYAEFYTRCKKLACALAQKYIG 67
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
PG V+V+ N P M E H+AVPM GA+ T+NTRLD ++ L H +K++ D +
Sbjct: 68 PGDTVAVMLANTPPMLEAHYAVPMVGAVLLTLNTRLDPAILAFQLDHGGAKVLITDREFA 127
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
+++ +++ +K +++ +D E + I YE L GDP F W
Sbjct: 128 NIMKPALAM----AKVKPIIIDYNDLEFPQTGEALSSI-------DYEAFLQGGDPDFKW 176
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
PK + + + LNYT GTT PKGVV ++ ++ + I + + V LWTLPMFH
Sbjct: 177 RWPKDEWEAISLNYTSGTTGNPKGVVYHHRGAALMCYANAISTGMTRFPVYLWTLPMFHC 236
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQL 300
NGW F W +V T+VCLR A ++ I H V+H+ GAPIV+ L ++P E +++
Sbjct: 237 NGWCFPWTITMVQGTHVCLRWVRAKAMYDYIVAHKVSHLSGAPIVMATLLNAPDDEKQKI 296
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
+ V A +PPPA V+ GF ++H YG TE G W W+ LP ER++
Sbjct: 297 EHGVAFNHAAAPPPASVISAMTDAGFQLTHLYGLTETYGPATINEWDASWSDLPPAERSA 356
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
+ RQGVR + L + + DPET V DG+T GE++ RG +M GYLK+ +AT +
Sbjct: 357 KRIRQGVRYVALEGLSVRDPETMQEVTPDGETLGEVMFRGNIVMKGYLKNEKATDEAFAG 416
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +++GD+G+MHPDGY+++KDRSKD+IISGGENISS E+E VLY HP V AVV +PD
Sbjct: 417 GWFHSGDLGVMHPDGYIQLKDRSKDIIISGGENISSIEVEEVLYKHPAVAFCAVVAKPDE 476
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E PCAF+ L+ GT + T +II++CRA + RY VP+ +VF E+PKT+TGK+Q
Sbjct: 477 KWGETPCAFIELRPGTTA-----TADEIIEWCRAGLARYKVPRHIVFA-EVPKTSTGKIQ 530
Query: 541 KYVLGDIAN 549
K+ L ++A
Sbjct: 531 KFKLREMAK 539
>gi|418054249|ref|ZP_12692305.1| o-succinylbenzoate--CoA ligase [Hyphomicrobium denitrificans 1NES1]
gi|353211874|gb|EHB77274.1| o-succinylbenzoate--CoA ligase [Hyphomicrobium denitrificans 1NES1]
Length = 541
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/550 (42%), Positives = 330/550 (60%), Gaps = 25/550 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN LTPL F+ R A A + +II+ +++ Y+RC QLAS+LS GI P
Sbjct: 9 LAKNSANYQQLTPLSFLARTAIAAPNHTAIIHGKARISYADFYKRCRQLASALSMRGIGP 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G +SV+ N PAM E HF V M+GA+ +TINTRLDA ++ L H+ +KL+ D S+
Sbjct: 69 GDTISVVLANTPAMLEAHFGVAMTGAVLHTINTRLDAAVVAFQLDHAGTKLLITDREFSA 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ ++L +K +V+ DD E P+ A + YE ++ GDP F W
Sbjct: 129 TVKAALAL----AKIQPIVIDYDDPEF-------PQTGEALSAEDYEAFVSGGDPNFDWR 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + + LNYT GTT PKGVV ++ ++ + I + + V LWTLPMFH N
Sbjct: 178 WPEDEWEAISLNYTSGTTGNPKGVVYHHRGAALMCYANTISTGMTRFPVYLWTLPMFHCN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVL-NLLSSSPEAKQLDR 302
GW F W + T+VCLR A ++ I H VTH+ GAPIV+ LL+++P+ K R
Sbjct: 238 GWCFPWSVTLAQGTHVCLRWVRAKAMYDAIVDHKVTHLSGAPIVMATLLNAAPDEK---R 294
Query: 303 PVRILTAGSPPPAPVLLRTESL----GFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
P+ + A + AP + GF ++H YG TE G W P WN L A ER
Sbjct: 295 PISHVVAFNHAAAPPPAAVIAAMTDAGFELTHLYGLTETYGPATINEWDPSWNDLSAPER 354
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
++ + RQG+R + L + ++DPET V DG+T GE++ RG +M GYLK+ +AT +
Sbjct: 355 SAKRIRQGIRYVALEGLTVMDPETMTEVPADGETLGEVMFRGNIVMKGYLKNEKATEEAF 414
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
G +++GD+G++HPDGY+++KDRSKD+IISGGENISS E+E VLY HP V AVV +P
Sbjct: 415 AGGWFHSGDLGVLHPDGYIQLKDRSKDIIISGGENISSIEVEEVLYKHPSVAFCAVVAKP 474
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
D W E PCAF+ L+ G + TE +I+++CR + RY VP+ VVF E+PKT+TGK
Sbjct: 475 DEKWGETPCAFIELRAGASA-----TEAEILEWCRQGLARYKVPRHVVFA-EVPKTSTGK 528
Query: 539 VQKYVLGDIA 548
+QK+ L ++A
Sbjct: 529 IQKFKLREMA 538
>gi|163847448|ref|YP_001635492.1| acyl-CoA synthetase [Chloroflexus aurantiacus J-10-fl]
gi|222525298|ref|YP_002569769.1| acyl-CoA synthetase [Chloroflexus sp. Y-400-fl]
gi|163668737|gb|ABY35103.1| AMP-dependent synthetase and ligase [Chloroflexus aurantiacus
J-10-fl]
gi|222449177|gb|ACM53443.1| AMP-dependent synthetase and ligase [Chloroflexus sp. Y-400-fl]
Length = 548
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/552 (42%), Positives = 333/552 (60%), Gaps = 23/552 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PLTPL F++R A + P++I+ + YTW+Q Y R +LAS+L + G+
Sbjct: 8 LDKNAANYTPLTPLSFLKRTAMVYPNLPAVIHGERWYTWAQVYERSRRLASALRALGVGF 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V+V+ N P MYE HF VP +GA+ NTIN RLDA TI+ IL H E+K++ D S
Sbjct: 68 RDTVAVVLSNTPEMYECHFGVPGAGAVLNTINVRLDAATIAFILDHGEAKVLITDREFSP 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ V + ++T ++ + D + P R+ + YE LA GDP+F +
Sbjct: 128 V---VKAALEQCNRTLTVIDVDD----PLYTGPGERLGSLE----YEQFLASGDPEFDLI 176
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + + LNYT GTT+ PKGVV ++ ++ A+ +++ W +P +V LWTLPMFH N
Sbjct: 177 YPADEWEAITLNYTSGTTANPKGVVYHHRGAYLNALSNIVSWGMPHHAVYLWTLPMFHCN 236
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP-----EAK 298
GW F W A TN+CLRK DA ++ I + VTH CGAPIV +L++++ E +
Sbjct: 237 GWCFPWTIAANAGTNICLRKVDAGLIWQAIETYRVTHYCGAPIVHSLIANNAPPHWREGR 296
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
+ V L A +PPPA VL +GF ++H YG TE G CA +P W+ LP E+
Sbjct: 297 GTHK-VSGLIAAAPPPAAVLQAMAEIGFDITHVYGLTETYGPAAVCAKQPDWHTLPIAEQ 355
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A L RQGV + ++DP T V DGQT GE++ RG +M GYLK+P AT
Sbjct: 356 AHLNGRQGVTYHAQEAISVLDPATMQPVPWDGQTMGEVMFRGNIVMKGYLKNPAATEAAF 415
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
+DG +++GD+ ++HPDGY++I DR+KD+IISGGENISS E+E LY HP V AAVV P
Sbjct: 416 RDGWFHSGDLAVVHPDGYIKITDRAKDIIISGGENISSIEVEDALYKHPAVMLAAVVAAP 475
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
DP W E+P AF+ L+ G+ TE+++ Q+CR + Y +PK F LPKT+TGK
Sbjct: 476 DPKWGEVPHAFIELRE-----GVTVTEEELQQHCRRFLAGYKIPKKFTF-GPLPKTSTGK 529
Query: 539 VQKYVLGDIANS 550
+QK++L + A S
Sbjct: 530 IQKFILREQARS 541
>gi|406890026|gb|EKD36043.1| hypothetical protein ACD_75C01665G0002 [uncultured bacterium]
Length = 536
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/534 (43%), Positives = 328/534 (61%), Gaps = 24/534 (4%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTP+ FI+R+ D +++ + YT+ + Y R +LAS+L GI G V+ I+PN
Sbjct: 11 LTPVNFIKRSVEVYPDKLAVVNGNKRYTYREHYARINRLASALKKQGIGRGDKVAFISPN 70
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH-LSSSLLLEVVSLF 132
M E HFAVPM GA+ T+N RL A +S IL HS++K+ FVD+ + ++L E+ L
Sbjct: 71 TAPMLEAHFAVPMIGAVLVTVNIRLSAPEVSYILNHSDTKICFVDNEFAGTVLAELGKL- 129
Query: 133 PPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPM 192
+ V I D + S P D +D YE++L G P+ + +
Sbjct: 130 ---THVRAFVNICD----AGSDCP------LDGID-YESLLMTGSPEAMAIDVDDERSVC 175
Query: 193 VLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAA 252
+NYT GTT PKGV+ ++ ++ + ++ + +SV LWTLPMFH NGW F W
Sbjct: 176 SINYTSGTTGKPKGVMYHHRGAYLNGLGDCLETGLTSESVYLWTLPMFHCNGWCFPWAVT 235
Query: 253 VVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL--DRPVRILTAG 310
GAT+VCLRK +F I VTHMC APIVL +++ P+ K L +RP++I G
Sbjct: 236 AAGATHVCLRKVIPDEIFKQIIAEKVTHMCAAPIVLIGMANHPDFKNLKPERPLKIAVGG 295
Query: 311 SPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTI 370
+PP ++ + ES+G V+H YG TE+ G CAW +WN LPA E+AS+++RQGV
Sbjct: 296 APPSPTIIQQMESIGARVNHVYGLTEVYGPYTICAWHNEWNALPAGEQASIRSRQGVAYT 355
Query: 371 GLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGM 430
+D+VDPET V RDG+T GE+VMRG +MLGY KDPEAT K K +++GD+ +
Sbjct: 356 VCQFLDVVDPETMEPVPRDGKTIGEVVMRGNVVMLGYYKDPEATEKAFKGDWFHSGDLAV 415
Query: 431 MHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFV 490
MHP+ Y++I DR KD+IISGGENIS+ E+E+VLY HP V E AVV PD W E+P AF+
Sbjct: 416 MHPNNYIQILDRQKDIIISGGENISTVEVENVLYRHPDVMEVAVVAVPDSKWGEVPKAFI 475
Query: 491 SLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
+ K GT+ T +++I +C+ + R+ PK++ F+ ELPKT+TGKVQK+VL
Sbjct: 476 TPKPGTNP-----TAEELIAFCKENLARFKAPKSIEFV-ELPKTSTGKVQKFVL 523
>gi|222622057|gb|EEE56189.1| hypothetical protein OsJ_05143 [Oryza sativa Japonica Group]
Length = 556
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 241/552 (43%), Positives = 349/552 (63%), Gaps = 29/552 (5%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDT--TYTWSQTYRRCLQLASSLSSFGINPGHV 66
AN PLTP+ F++RAA D P+I+ + + T TW +T RCL+L ++L++ G++ HV
Sbjct: 9 ANHAPLTPITFLDRAALVYPDRPAIVASSSGLTRTWRETRDRCLRLTAALAALGVHRHHV 68
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V+V A NIPAM ELHF +PM+GA+ T+N+RLDA S++L+HSE+KL+FVD +
Sbjct: 69 VAVFAQNIPAMCELHFGIPMAGAVICTLNSRLDAAMASVLLRHSEAKLIFVDCALLDVAH 128
Query: 127 EVVSLFPPHSKTPK-LVLITDDKEISSSSSPPPRIPPADFVDTYENML--AKGDPQFSWV 183
+ + TP LVLI++ + S + ++P YE+++ A P+F+
Sbjct: 129 DAIRRISQSGATPPVLVLISELLDDPSDA----KLPSGRVDYEYEHLVGNAGSSPEFAVR 184
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + +P+ LNYT GTTS PKGV+ ++ ++ ++ +++ + V LWT+PM
Sbjct: 185 WPADENEPIALNYTSGTTSRPKGVIYSHRGAYLNSLAAVLLNDMASTPVYLWTVPM---- 240
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLD 301
AA A+ R P R VTHM GAP VL+++ +++ E + +
Sbjct: 241 -------AAPTCASAGSPR----PPSSTPWRATVVTHMGGAPTVLSMIVNATAEEQRPVA 289
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R V ++T G+PPP VL R E GF+V H YG TE G C W+P+W+ LPA ERA +
Sbjct: 290 RRVTVMTGGAPPPPKVLHRMEEQGFLVIHSYGLTETYGPATVCTWRPEWDALPAEERARI 349
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
K+RQGV GL EVD+ DP T SV RDG+T GE+++RG ++M GY KD AT++ + G
Sbjct: 350 KSRQGVHHHGL-EVDVKDPATMRSVPRDGKTMGEVMLRGNTVMSGYYKDGAATAEALAGG 408
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GD+ + H DGY+++ DRSKD+IISGGENIS+ E+E+ L+SHP V EAAVVGRPD +
Sbjct: 409 WFRSGDLAVRHEDGYVKVLDRSKDIIISGGENISTIEVEAALFSHPAVEEAAVVGRPDDY 468
Query: 482 WQEIPCAFVSLKTGTDSGGMM-TTEKDIIQYCRARIPRYMVPKTVVFIDE-LPKTATGKV 539
W E PCAFV L+ G + E++++ YCRAR+PRYM P+TVV ++E LPKTATGKV
Sbjct: 469 WGETPCAFVKLRPGAAAAAKAGVVEEELMAYCRARLPRYMAPRTVVVVEEGLPKTATGKV 528
Query: 540 QKYVLGDIANSM 551
QK+ L A +M
Sbjct: 529 QKFELRARAKAM 540
>gi|294083872|ref|YP_003550629.1| acyl-CoA synthase [Candidatus Puniceispirillum marinum IMCC1322]
gi|292663444|gb|ADE38545.1| acyl-CoA synthase [Candidatus Puniceispirillum marinum IMCC1322]
Length = 536
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/546 (41%), Positives = 328/546 (60%), Gaps = 24/546 (4%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L + AN L+P+ ++R + + I+ W + RC +LAS+L+ I
Sbjct: 7 ELARDAANHAALSPVSILKRVERVHPELTAQIHGRIRRNWGEVAERCKRLASALAKRNIG 66
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G V++IAPNIP E A+PM GA+ N NT+LDA TI+ IL+H E+K++FVD S
Sbjct: 67 KGDTVALIAPNIPEALECALAMPMLGAVLNANNTKLDAGTIAYILEHGEAKVLFVDTEFS 126
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD--TYENMLAKGDPQF 180
+ + V+ S L++ +D E P D + TY+ +LA+GDP F
Sbjct: 127 DVAAKAVA----QSDRDLLIIDIEDSEG----------PGGDKIGALTYDALLAEGDPNF 172
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+ P + D + LNYT GTT PKGVV ++ ++ AV++++ W +P V LWTLP+F
Sbjct: 173 PYCLPDDEWDALALNYTSGTTGRPKGVVYSHRGSWMNAVNNVVTWEMPHHPVYLWTLPLF 232
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGW F W ++ T+V LR A ++ + VTH+CGAPI+++++ S+ E ++
Sbjct: 233 HCNGWCFPWTITLLAGTHVFLRAPRADAIYDAFVDYKVTHLCGAPIIMSMILSASEKRKF 292
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
+ ++++TA +PPPA V+ E+LG ++H YG TE+ G V CA KP W +L ++A
Sbjct: 293 SQKIKMMTAAAPPPASVIQGIEALGISITHVYGLTEVYGPAVVCAEKPVWARLAPEKQAE 352
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
LKARQGV +V +++PET + V DG+T GE+ RG +M GYLKDP T+K +
Sbjct: 353 LKARQGVAYELEEDVLVLNPETSVPVAWDGETLGEVAFRGNIVMKGYLKDPVETAKAFRG 412
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +++GD+ + H DGY+EI+DRSKD+IISGGENISS E+E LYSHP V+ AVV PD
Sbjct: 413 GWFWSGDIAVQHADGYIEIRDRSKDIIISGGENISSIEVEKALYSHPAVSLVAVVAMPDE 472
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV L SG +E +++ + R + Y PK V+F ELPKT TGK++
Sbjct: 473 KWGEVPCAFVEL-----SG--QASEAELLAHAREGLAGYQCPKKVIF-GELPKTTTGKIR 524
Query: 541 KYVLGD 546
K L D
Sbjct: 525 KNELRD 530
>gi|297172460|gb|ADI23433.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [uncultured
gamma proteobacterium HF0770_33G18]
Length = 541
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/551 (41%), Positives = 330/551 (59%), Gaps = 20/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ N AN PL+P+ F+ RAA + +II ++++Q ++R QLAS+L GI
Sbjct: 8 LQKNTANFEPLSPVSFLRRAAQIVPEHTAIIDGTRRFSYAQFWQRSCQLASALRGRGIGA 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+++A N P M E H A+PM GA+ N++N RLD +TI IL H E+K++ D +
Sbjct: 68 GDCVAILAGNTPEMLEAHNAIPMMGAVLNSLNVRLDPKTIRFILDHGEAKVLLADLAFAD 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+L VV ++ +V I D E SSP + YE +L++G F
Sbjct: 128 VLETVVKDL---NRDILIVQIGDSDE--GLSSPNGKT-------AYETLLSEGSCSFVGD 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + L YT GTT PKG V ++ ++ A+ ++ + + SV LWTLPMFH +
Sbjct: 176 EPQDEWQALSLLYTSGTTGDPKGCVYHHRGAYLSAMANMNTVGLNRDSVYLWTLPMFHCD 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW+FTW AT+VCLR+ D +F LIR V+HMCGAPIVLN+L+++ ++ P
Sbjct: 236 GWTFTWAVTAAMATHVCLRQMDPGIIFQLIRDEKVSHMCGAPIVLNMLANARADQKCTFP 295
Query: 304 --VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V I T G+ PP+ V+ E GF V+H YG TE G C + W +L +R++
Sbjct: 296 QIVEISTGGAAPPSAVIEAMEEHGFRVTHLYGLTETYGPATVCIPQVDWPELSTTQRSAK 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGV L + DPET V D QT GE+++RG ++M GYLK+ AT C G
Sbjct: 356 IARQGVHYGTLEGGTVKDPETMEDVPWDAQTLGEVMVRGNTVMKGYLKNSTATDACFSGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+ + HPDGY+E+KDRSKD+IISGGENISS E+E +LY HP + EAAVV RPDP
Sbjct: 416 WFHSGDIAVRHPDGYIEVKDRSKDIIISGGENISSLEVEEILYRHPDILEAAVVARPDPK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV+L G + E +++ YCR + + VP++VVF LPKT+TGK+QK
Sbjct: 476 WGESPCAFVTLHDGVHA-----DEANVVGYCRQHLAGFKVPRSVVF-GPLPKTSTGKIQK 529
Query: 542 YVLGDIANSMS 552
++L D A+ +
Sbjct: 530 FLLRDRASGLE 540
>gi|421485935|ref|ZP_15933487.1| acyl-CoA synthetase [Achromobacter piechaudii HLE]
gi|400195716|gb|EJO28700.1| acyl-CoA synthetase [Achromobacter piechaudii HLE]
Length = 563
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 240/543 (44%), Positives = 319/543 (58%), Gaps = 21/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN LTP+ FI RAA ++++ TW+QTY R +LA++L++ GI
Sbjct: 9 LARRDANYEALTPVDFIARAADVYGHRLAVVHGKVRRTWAQTYERAQRLANALANAGIRR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM E HF VPM GA+ NT+NTRLD ++ +L H E++ + VD
Sbjct: 69 GDTVAVMLPNIPAMVEAHFGVPMLGAVLNTLNTRLDTPSVLFMLGHGEARALIVDTEYGD 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ + FP K+V + D S P +P A YE LA + W
Sbjct: 129 VAQRARAEFP----HLKIVSVHD------LDSAPATLPGAT---DYEAFLADAPAHYDWK 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV Y+ ++ AV ++++W +PK +V LWTLPMFH N
Sbjct: 176 PPADEWDAIALNYTSGTTGDPKGVVYHYRGAYMNAVSNILEWDMPKHAVYLWTLPMFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W A NVCLRKFD TVF LIR GVTH CGAPIV + L+++P + +
Sbjct: 236 GWCFPWTVAARAGVNVCLRKFDPKTVFDLIRDEGVTHYCGAPIVQSALANAPAEMRAGIT 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
VR + AG+ P V+ + +GF ++H YG TE+ G CA + W+ L RA L
Sbjct: 296 HTVRTMVAGAAPAPAVIAKMRDIGFELTHVYGLTEVYGPAAVCARQESWDALDDERRALL 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGVR + + +P+T V D QT GEI+ RG M GYLK+ AT + G
Sbjct: 356 TARQGVRYHLQAGISVRNPDTMEEVPADEQTVGEIMFRGNICMKGYLKNERATEEAFAGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G+M DGY+ IKDRSKD+IISGGENISS E+E LY HP V AVV PDP
Sbjct: 416 WFHTGDLGVMTADGYVRIKDRSKDIIISGGENISSIEVEDALYRHPAVAAVAVVAMPDPK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK G + T ++II +C+ +P + VP+ V F ELPKT+TGK+QK
Sbjct: 476 WGETPCAFVELKAGCTA-----TAEEIIAHCKLLLPGFKVPRAVRF-GELPKTSTGKIQK 529
Query: 542 YVL 544
+ L
Sbjct: 530 FEL 532
>gi|159043385|ref|YP_001532179.1| AMP-dependent synthetase and ligase [Dinoroseobacter shibae DFL 12]
gi|157911145|gb|ABV92578.1| AMP-dependent synthetase and ligase [Dinoroseobacter shibae DFL 12]
Length = 541
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/545 (42%), Positives = 322/545 (59%), Gaps = 20/545 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTPL + RAA D +++Y +T+++ + R +LAS+L+ GI PG VV+
Sbjct: 15 ANYVPLTPLSHLARAALVYPDREAVVYGARRFTYAEYHARVSRLASALAGAGIAPGDVVA 74
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PNIPAM E HF VP GA+ NTIN RLD T++ IL H +K V VD L E
Sbjct: 75 TLLPNIPAMVEAHFGVPACGAVLNTINIRLDVDTVAYILSHGGAKAVLVDSQFLPLAAEA 134
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
P L+ + DD + YE+ LA GDP F W+ P+ +
Sbjct: 135 CERL--DGPAPLLIEVADDAA---------GVHALGGYTEYEDFLAGGDPDFPWIMPRDE 183
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
+ + LNYT GTT PKGVV ++ +++ + ++I W + L +P+FH NGW+ +
Sbjct: 184 WESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVISWRMVLYPRWLAIVPLFHCNGWNHS 243
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDRPVRI 306
W ++G T VC R A ++ I ++GVTH GAPIVLN++ ++P+A + V +
Sbjct: 244 WMMPMLGGTVVCCRDVSAQAIYTAIAENGVTHFGGAPIVLNMIVNAPDAARRPFSHTVEV 303
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
TAG+PP A L E LGF V+ YG TE G C W P W+ LP ERA++KARQG
Sbjct: 304 FTAGAPPAAATLAAIEELGFNVTQVYGLTETYGHVTECVWNPDWDTLPQAERAAIKARQG 363
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
V + + ++DPE V DG T GE++MRG S+M GY ++P+AT++ G +++G
Sbjct: 364 VALPQMEHITVMDPEM-RQVPMDGATTGEVMMRGNSVMKGYYRNPDATAEAFAGGYFHSG 422
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+ + HPDGY++I DR+KD+IISGGENISS E+E L HP V AVV +PDP W E+P
Sbjct: 423 DIALQHPDGYIQIADRAKDIIISGGENISSVEVEGALMHHPAVLLCAVVAKPDPTWGEVP 482
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546
CAFV LK G + E +II + R R+ + PK VVF ELPKT+TGK+QK+ L +
Sbjct: 483 CAFVELKDGKTA-----EEAEIIAFARERLAGFKTPKKVVFT-ELPKTSTGKIQKFELRN 536
Query: 547 IANSM 551
A ++
Sbjct: 537 RAKAL 541
>gi|406707193|ref|YP_006757545.1| AMP-binding protein [alpha proteobacterium HIMB59]
gi|406652969|gb|AFS48368.1| AMP-binding enzyme [alpha proteobacterium HIMB59]
Length = 551
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/552 (40%), Positives = 335/552 (60%), Gaps = 14/552 (2%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L PNPAN PLTPL F+ERA+ D +II+ +T+ + Y R QLAS+LS G+
Sbjct: 8 NLDPNPANYQPLTPLSFLERASDVFPDFVAIIHGSQRFTYREFYTRSKQLASALSKQGMT 67
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G VS + N P M E H+ +PM GA+ + INTRLD TI+ L H++S+++ D S
Sbjct: 68 RGSTVSTLLMNTPPMLEAHYGIPMCGAVIHAINTRLDPATIAFQLDHADSQILLFDQELS 127
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSS-SPPPRIPPADFVDTYENMLAKGDPQFS 181
++ EV+ L K L++ DK++ + S + +D YEN + GDP +
Sbjct: 128 LVIKEVLEL----CKVNPLLVCYQDKQLDTKDLSKDTNLSSHKIID-YENFIEVGDPDYQ 182
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W+ P+++ D + + YT GTT PKGVV ++ +++A + + +PK SV LWTLPMFH
Sbjct: 183 WLMPENEWDAISVGYTSGTTGDPKGVVSHHRGAYLLAQGNALVASMPKHSVYLWTLPMFH 242
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSS--SPEAKQ 299
NGW F W + + T+VCLR+ A ++ I+ H V+H+CGAPIV++++ S + + Q
Sbjct: 243 CNGWCFPWTLSAIIGTHVCLRQVRAEPIWKSIKDHKVSHLCGAPIVMSIILSMENQQDYQ 302
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
+ V+ TA +PPP VL + GF+V+H YG TE G V W W+ L +A
Sbjct: 303 PEHQVQFFTAAAPPPENVLKQMSEAGFLVTHLYGLTETYGPAVINEWNRDWDDLDMTSQA 362
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
SLKARQGVR + L + ++DP+T V DGQT GE++ +G +M GYLK+ A K
Sbjct: 363 SLKARQGVRYLPLEHLQVLDPDTLKPVPADGQTIGEVMFQGNIVMKGYLKNKPANDKAFA 422
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+ +M+PDGYL++KDRSKD+IISGGENISS EIE L + +V+ AAV+ PD
Sbjct: 423 GGWFHSGDLAVMYPDGYLQLKDRSKDIIISGGENISSIEIEEALLKNEVVSAAAVIAVPD 482
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+PCAF+ +K + E Q+C + + + +PK F + +P+T+TGK+
Sbjct: 483 EKWGEVPCAFIEVKDQS-----QWQEDSAKQWCASHLASFKIPK-YYFFESIPRTSTGKI 536
Query: 540 QKYVLGDIANSM 551
QKY+L + A ++
Sbjct: 537 QKYILREKAKNL 548
>gi|295699745|ref|YP_003607638.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1002]
gi|295438958|gb|ADG18127.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1002]
Length = 556
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/545 (41%), Positives = 327/545 (60%), Gaps = 23/545 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN L+P+ F+ RA+ P+++Y TW +T+ RC++LAS+L+S GI
Sbjct: 8 LQRRDANHVALSPIDFLVRASEVYGGLPAVVYGRVNRTWGETFERCVRLASALASLGIKR 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM E HF VPM+GA+ N +NTRL+A +I +++H E+K++ VD ++
Sbjct: 68 GDTVAVMLPNIPAMVETHFGVPMAGAVLNALNTRLEAASILYMIEHGEAKVLIVDTEFAA 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITD-DKEISSSSSPPPRIPPADFVDT-YENMLAKGDPQFS 181
+ V FP K++ + D + +I + P DT YE+ +A GD F
Sbjct: 128 IADRVRERFP----EIKIICVRDFESDIDHGAMPN---------DTEYEDFIASGDSNFE 174
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
++ P+ + D + LNYT GT PK VV ++ ++ A+ + ++W + K LWTLPMFH
Sbjct: 175 YLGPEGEWDAIALNYTSGTKGNPKRVVYHHRGAYLCAISNALEWDLEKHPSYLWTLPMFH 234
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
GW+F W A NVCLR+ DA +F LIR++ VTH CGAPIV + ++++PE +
Sbjct: 235 CYGWTFPWAVAARAGINVCLRRVDAKVIFDLIRRYRVTHYCGAPIVHSTIANAPEEWRAG 294
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
++ V+ + AG+ P V+ R +GF + H YG TE+ G CA + + ER
Sbjct: 295 IEHKVKAMVAGAAPGPTVIARMAEIGFDLLHVYGLTEVYGPAAVCAKQQARTHVNNAERV 354
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L ARQGVR + DP T V +DGQT GE++ RG M GYLK+ +AT + +
Sbjct: 355 VLNARQGVRYHLQAGTTVRDPHTMEEVPKDGQTIGEVMFRGNITMKGYLKNEKATEEALA 414
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G Y TGD+G++ PDGY++ KDRSKD+IISGGENISS E+E +YSHP V AVV +PD
Sbjct: 415 GGWYRTGDLGVLFPDGYVKPKDRSKDIIISGGENISSIEVEDAIYSHPAVAVVAVVAQPD 474
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+PCAFV + G + +E DII +C++ + + VPK V F ELPKT K+
Sbjct: 475 AKWGEVPCAFVERRPGQQA-----SESDIIAHCKSLLAGFKVPKAVRFC-ELPKTFPRKI 528
Query: 540 QKYVL 544
QK+ L
Sbjct: 529 QKFAL 533
>gi|402774086|ref|YP_006593623.1| AMP-dependent synthetase and ligase [Methylocystis sp. SC2]
gi|401776106|emb|CCJ08972.1| AMP-dependent synthetase and ligase [Methylocystis sp. SC2]
Length = 552
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/550 (42%), Positives = 326/550 (59%), Gaps = 19/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ NPAN LTP+ F+ERAA D +I + + Y R L+LAS+L G+
Sbjct: 10 LERNPANFQSLTPITFLERAAAVFPDRIAIAHGQLRRNYRDFYARSLRLASALEKAGLGR 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VSV+ N PAM E H+AVPM GA+ NT+NTRLDA ++ L H+E+K + VD S
Sbjct: 70 GDTVSVMLANTPAMLECHYAVPMMGAVLNTLNTRLDASILAFTLDHAEAKALIVDREFSD 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ E ++L +K L++ D E P + YE L GD + W
Sbjct: 130 VIREALAL----AKARPLIIDYSDPEYDGPGEPLGAV-------DYEEFLRSGDADYQWS 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV ++ ++ A+ +++ + + + LWTLPMFH N
Sbjct: 179 PPGDEWDAISLNYTSGTTGDPKGVVYHHRGAYLTALGNVLTGDMGRHPIYLWTLPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLD 301
GW F W +V T+VCLR+ A ++ L+ +HGVTH+CGAPIV++ L + E K L
Sbjct: 239 GWCFPWSISVNAGTHVCLRQVRAGHIYELMAEHGVTHLCGAPIVMSTLLNARESEKKPLK 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R R TA +PPP VL ++ GF V+H YG TE G W W+ L +A +
Sbjct: 299 RAARFFTAAAPPPQAVLAGMKAAGFEVTHLYGLTETYGPAAVNEWHDDWDSLDGGAQAQM 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGVR + L +D+++P+T V RDG T GE++ RG +M GYLK+ A+ K G
Sbjct: 359 KARQGVRYLVLENLDVINPDTMQPVPRDGATMGEVMFRGNVVMKGYLKNKGASEKAFHGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G+ HPDGY++++DRSKD+IISGGENISS E+E L+ HP V AVV PD
Sbjct: 419 WFHSGDLGVRHPDGYIQLRDRSKDIIISGGENISSIEVEDALFRHPKVRAVAVVAAPDDK 478
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK G + + +++I + R + + P+ VVF ELPKT+TGK++K
Sbjct: 479 WGETPCAFVELKDGEQA-----SAEELIDWTRQHLAHFKCPRHVVFC-ELPKTSTGKIRK 532
Query: 542 YVLGDIANSM 551
YVL + A +
Sbjct: 533 YVLRERAREI 542
>gi|119503919|ref|ZP_01626001.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
gi|119460427|gb|EAW41520.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
Length = 539
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/546 (41%), Positives = 332/546 (60%), Gaps = 20/546 (3%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L AN PL+P+ ++R + P+ ++ W + RC +LAS+L+ G++
Sbjct: 7 ELAKTAANHTPLSPVSILKRVERVHPNLPAQVHGSIRRNWGEVAARCKRLASALAKRGVS 66
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G V++IAPNIP E AVPM GA+ N N RLDA T+ IL+H E+ ++ VD S
Sbjct: 67 KGDTVALIAPNIPEALECALAVPMLGAVLNANNMRLDASTLGYILEHGEASVLLVDTEFS 126
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ E V L S LV+ +D E + TYE +LA+G F++
Sbjct: 127 AVAAEAVRL----SGRELLVIDIEDTEGPGGACIGAL--------TYEALLAEGSEDFAY 174
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P + D + LNYT GTT PKGVV ++ + +V++++ W +P LWTLP+FH
Sbjct: 175 ALPDDEWDALALNYTSGTTGHPKGVVYSHRGAWTNSVNNVVTWEMPHHPTYLWTLPLFHC 234
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQL 300
NGW F W ++ T+V +R A ++A +HGVTH+CGAPI++++++S+P E +
Sbjct: 235 NGWCFPWTITLLAGTHVFMRGPTAKGIYAAFAEHGVTHLCGAPIIMSMIASAPNDERQPF 294
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
D+ VR++TA +PPPAPV+ E +G ++H YG TE+ G V CA KP+W LP E++
Sbjct: 295 DQKVRMMTAAAPPPAPVIEAMEQMGIAITHVYGLTEVYGPAVVCAEKPEWAALPLDEQSK 354
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
LKARQGV +V ++DPET L V DG+T+GE+V RG +M GYLK PE T +D
Sbjct: 355 LKARQGVAYELEEDVLVLDPETSLPVPLDGETQGEVVFRGNIVMKGYLKRPEETDAAFRD 414
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +++GD+ + HPDGY+EI+DR+KD+IISGGENISS E+E+ L++HP V+ AVV D
Sbjct: 415 GWFWSGDLAVQHPDGYIEIRDRAKDIIISGGENISSIEVENALHTHPAVDFVAVVAMADE 474
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E PCAFV L G+ + TE++++ + RA + + PK VVF LPKT TGK++
Sbjct: 475 KWGETPCAFVELVEGSTA-----TEQELLDHARALLAGFKRPKKVVF-GPLPKTTTGKIR 528
Query: 541 KYVLGD 546
K L D
Sbjct: 529 KNELRD 534
>gi|393765127|ref|ZP_10353717.1| AMP-dependent synthetase and ligase [Methylobacterium sp. GXF4]
gi|392729419|gb|EIZ86694.1| AMP-dependent synthetase and ligase [Methylobacterium sp. GXF4]
Length = 550
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/550 (42%), Positives = 335/550 (60%), Gaps = 24/550 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PLTP + RAA + ++I T++ YRRC +LAS L++ GI
Sbjct: 23 LDRTPANDVPLTPASLLARAAASVGARIAVIDGARRLTYADLYRRCRRLASGLATRGIGR 82
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V+++APN+ M E HFAVPM GA+ N +NTRLD TI+ L H ++++ V+ +
Sbjct: 83 LDTVAILAPNVAEMIEAHFAVPMLGAVLNPLNTRLDPATIAFSLDHGGARVLIVEAEYGA 142
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L ++ P LV+ I+ + IP YE +LA+GDP ++W
Sbjct: 143 LAARALAD----RAGPILVVEIGASGIAGA------IP-------YETVLAEGDPDYAWP 185
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + L YT GTT PKG V ++ ++ A+ + + + + +SV LWTLPMFH +
Sbjct: 186 GPADEWQSLCLLYTSGTTGDPKGAVYSHRGAYLQALGNAVTFGLTGESVYLWTLPMFHCS 245
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GWS+ W + AT +CLRK + +F+LI +HGVTH+CGAPIVL++++ +P + ++ P
Sbjct: 246 GWSYPWASVAACATQICLRKVEPAAIFSLIAEHGVTHLCGAPIVLSIIAHAPASDRVPFP 305
Query: 304 VRILTA-GSPPPAPVLLRT-ESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R+ A G P+ ++RT E LGF V+H YG TE G C +P W LP +R +
Sbjct: 306 QRVRCAVGGAAPSSTIIRTMEELGFQVTHLYGATESYGPATVCLEQPDWADLPDDDRYAR 365
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGV L +VDP+T V +DG T GEI +RG ++M GYL +P+AT+K + G
Sbjct: 366 MARQGVPLATLEAAIVVDPDTDRPVPQDGLTVGEICLRGNTVMKGYLGNPDATAKALAGG 425
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
Y TGD+ + HPDG +EIKDR+KD+IISGGENISS E+E VL HP V AAVV RPD
Sbjct: 426 WYRTGDLAVWHPDGAVEIKDRAKDIIISGGENISSLEVEEVLMRHPAVMLAAVVARPDAT 485
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAF+ +K G S +++++I +CR R+ R+ VP+TVVF LPKT+TGK+QK
Sbjct: 486 WGESPCAFLEMKPGAAS----PSDQELIAFCRERMARFKVPRTVVF-GPLPKTSTGKIQK 540
Query: 542 YVLGDIANSM 551
+VL + A ++
Sbjct: 541 FVLREQARAL 550
>gi|311105566|ref|YP_003978419.1| AMP-binding protein [Achromobacter xylosoxidans A8]
gi|310760255|gb|ADP15704.1| AMP-binding enzyme family protein 8 [Achromobacter xylosoxidans A8]
Length = 548
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 242/547 (44%), Positives = 320/547 (58%), Gaps = 22/547 (4%)
Query: 1 MDR-LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSF 59
DR L AN LTP+ FI RAA +I++ W+QTY R +LA +L+
Sbjct: 2 FDRGLARRDANYEALTPVDFIARAAQVYGQRLAIVHGKVRRNWAQTYERAQRLAGALAQA 61
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
GI G V+V+ PNIPAM E HF VPM GA+ NT+NTRLD ++ +L H E++ + VD
Sbjct: 62 GIKRGDTVAVMLPNIPAMVEAHFGVPMLGAVLNTLNTRLDTPSVLFMLGHGEAQALIVDT 121
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ L + FP +L LI+ + + +P A VD YE LA
Sbjct: 122 EYAELAQRARAEFP------QLKLIS----VHDLDTAAAELPGA--VD-YEAFLAGAPAC 168
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
+ W P + D + LNYT GTT PKGVV Y+ ++ A+ ++++W +PK V LWTLP+
Sbjct: 169 YDWKPPADEWDAIALNYTSGTTGDPKGVVYHYRGAYLNAISNILEWDMPKHPVYLWTLPL 228
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W A NVCLRKFD TVF LIR GVTH CGAPIV + L+++P +
Sbjct: 229 FHCNGWCFAWTIAARAGVNVCLRKFDPQTVFDLIRNEGVTHYCGAPIVQSALANAPAEMR 288
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
+D VR + AG+ P V+ + +GF ++H YG TE+ G CA + W+ L E
Sbjct: 289 AGIDHTVRTMVAGAAPAPAVIAKMRDIGFELTHVYGLTEVYGPAAVCARQEAWDALDEEE 348
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
RA ARQGVR V + +P+T V D QT GE++ RG M GYLK+ AT +
Sbjct: 349 RALRNARQGVRYHLQAGVSVRNPDTMEEVPADEQTVGEVMFRGNICMKGYLKNERATDQA 408
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G + TGD+G+M DGY+ IKDRSKD+IISGGENISS E+E LY HP V AVV
Sbjct: 409 FAGGWFRTGDLGVMTADGYVRIKDRSKDIIISGGENISSIEVEDALYRHPAVAAVAVVAM 468
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PDP W E PCAFV LK G + T ++II +C+ +P + VP+ V F ELPKT+TG
Sbjct: 469 PDPKWGETPCAFVELKPGCSA-----TAEEIIAHCKLLLPGFKVPRAVRF-GELPKTSTG 522
Query: 538 KVQKYVL 544
K+QK+ L
Sbjct: 523 KIQKFEL 529
>gi|163745771|ref|ZP_02153130.1| AMP-dependent synthetase and ligase [Oceanibulbus indolifex HEL-45]
gi|161380516|gb|EDQ04926.1| AMP-dependent synthetase and ligase [Oceanibulbus indolifex HEL-45]
Length = 541
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/538 (41%), Positives = 323/538 (60%), Gaps = 20/538 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTPL + RAA ++IY + T++Q + RC +LAS+L G+ PG VV+
Sbjct: 15 ANFVPLTPLSHLRRAAQVFPTQTAVIYANHHATYAQYHDRCTRLASALVKLGVAPGDVVA 74
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PN+PA E HF VP GA+ NTIN RLD T+S IL H + ++ VD S + L
Sbjct: 75 TLIPNLPAQAEAHFGVPACGAVLNTINIRLDVGTVSYILDHGGAVVLLVD--SEFIALAE 132
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
+ P +V + D + + PP P YE++L++GDP F W+ P +
Sbjct: 133 AACAAMDGPPPAIVEVPD----TDAGHPPTGRHP-----LYEDLLSEGDPAFDWILPSDE 183
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
+ + LNYT GTT PKGVV ++ +++ + +++ W + + V + +P+FH NGW+ T
Sbjct: 184 WESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVVSWQMVLRPVFMQIVPLFHCNGWNHT 243
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLDRPVRI 306
W ++G T VC R A ++ I H VTH GAPIVLN+L ++ + + D V +
Sbjct: 244 WMMPLLGGTLVCCRDITAAAIYDAIADHDVTHFGGAPIVLNMLVNAAQEDRRAFDHTVEV 303
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
TAG+PP L + E LGF V+ YG TE G C W+ W+ L ERA++KARQG
Sbjct: 304 FTAGAPPAPATLSKIEKLGFNVTQVYGLTETFGHVTECLWQSDWDALSENERAAIKARQG 363
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
+ + E+ + D E RDG+ +GEI++RG ++M GYLK+PEAT++ G +++G
Sbjct: 364 IAMPMMEEITVTDAEMS-QTPRDGKAQGEIMIRGNAVMKGYLKNPEATAEAFAGGYFHSG 422
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+ + HPDGY++I DR+KD+IISGGENISS E+E VL H VN AAVV +P W E+P
Sbjct: 423 DIAVQHPDGYIQISDRAKDIIISGGENISSVEVEGVLMGHDAVNLAAVVAQPHDKWGEVP 482
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
CAFV +K G+++ TE+ +I + R + + PK V+F ELPKT+TGK+QK+ L
Sbjct: 483 CAFVEIKPGSEA-----TEEALIAFTRESLAGFKTPKRVIF-GELPKTSTGKIQKFEL 534
>gi|119383856|ref|YP_914912.1| acyl-CoA synthetase [Paracoccus denitrificans PD1222]
gi|119387315|ref|YP_918349.1| acyl-CoA synthetase [Paracoccus denitrificans PD1222]
gi|119373623|gb|ABL69216.1| AMP-dependent synthetase and ligase [Paracoccus denitrificans
PD1222]
gi|119377890|gb|ABL72653.1| AMP-dependent synthetase and ligase [Paracoccus denitrificans
PD1222]
Length = 551
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/542 (43%), Positives = 327/542 (60%), Gaps = 15/542 (2%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN P+TP+ ++ R A D P++I+ + +++ + C +LAS+L GI
Sbjct: 8 LERAAANHQPMTPISYLRRTARIHPDHPAVIHGRQRHGYARLWADCCRLASALLGRGIGR 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSG-AIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G VSV+ N P M HF VPM+G A+ ++INTR D T++ L H+ES+++ VD S
Sbjct: 68 GDTVSVLLSNTPPMIHAHFGVPMAGGAVLHSINTRSDPATVAFQLDHAESRVLIVDREFS 127
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ E ++L + LV+ DD E + P P+ P +D YE +LA+GDP F+
Sbjct: 128 AMAAEALAL----AGVRPLVVDFDDAEYPDDA-PHPKGEPIGSLD-YEQLLAEGDPDFAA 181
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P + D + LNYT GTT PKGVV ++ ++A++++I + + V LWTLPMFH
Sbjct: 182 TPPGDEWDAISLNYTSGTTGNPKGVVYHHRGAALMALNNVIHAGMGRHPVYLWTLPMFHC 241
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
NGW F W V T VCLR A +F I HGVTH+CGAPIV++ L ++ ++
Sbjct: 242 NGWCFPWTVPVQAGTQVCLRWVRAGAIFDAIADHGVTHLCGAPIVMSTLLNAAADRKRGF 301
Query: 303 PVRIL--TAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
P ++ TA +PPP VL GF V+H YG TE G V W P W+ LP +A+
Sbjct: 302 PQQVTFNTAAAPPPETVLQAMAKAGFGVTHLYGLTETYGPAVVNEWNPGWDGLPPSGQAA 361
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
KARQGVR + L E+ ++DPET V DG+T GE++ RG +M GYLK+PEAT+
Sbjct: 362 RKARQGVRYLSLDELAVMDPETLQPVPADGRTLGEVMFRGNVVMKGYLKNPEATAAAFAG 421
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +++GD+ +MHPDGY+++KDRSKD+IISGGENISS E+E LY HP V AVV P
Sbjct: 422 GWFHSGDLAVMHPDGYVQLKDRSKDIIISGGENISSIEVEEQLYRHPAVALCAVVAMPSE 481
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E PCAFV L+ G + TE +I +CRA + Y P VVF LPKT+TGK+Q
Sbjct: 482 KWGETPCAFVELREGGEE-----TEPGLIAHCRAGLAGYKCPSRVVF-GPLPKTSTGKIQ 535
Query: 541 KY 542
K+
Sbjct: 536 KF 537
>gi|224370890|ref|YP_002605054.1| protein AcsA3 [Desulfobacterium autotrophicum HRM2]
gi|223693607|gb|ACN16890.1| AcsA3 [Desulfobacterium autotrophicum HRM2]
Length = 525
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/537 (42%), Positives = 326/537 (60%), Gaps = 23/537 (4%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
N PL+PL F+ER+ + ++IYNDT YT+SQ R +LA++L GI G V+
Sbjct: 5 NYEPLSPLHFLERSTYVFPEKTAVIYNDTEYTFSQFKDRVCRLATALKQKGIKKGDKVAF 64
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
PN P + E H +VP+ G + IN RL I+ IL++S+SK +F+D + + V+
Sbjct: 65 FCPNTPYLIEGHHSVPLIGGVIVPINIRLAPEEIAYILENSQSKFLFIDTEFADSIRPVL 124
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDL 189
+ ++V I D ++ + P YE ++ +P+ + + ++
Sbjct: 125 DEI--NQMNVEIVNICD---VTEKAFDAPE---------YEAFISV-EPEEFFFGVEDEM 169
Query: 190 DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249
P+ LNYT GTT PKGV+ C++ ++ A+ ++++ + S LWTLPMFH NGW TW
Sbjct: 170 QPISLNYTSGTTGRPKGVLYCHRGAYLNALGEILEYHINSDSKYLWTLPMFHCNGWCHTW 229
Query: 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD--RPVRIL 307
G GAT +CLRK +F+ I KH TH+CGAPIVL +S + ++ I
Sbjct: 230 GVFAPGATQICLRKVVPEEIFSNIAKHKATHLCGAPIVLAGMSEYAQHHDVNVTEGFVIN 289
Query: 308 TAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
TAG+PP ++ + E LG V+ YG TE+ G + C WK +W++LP ERA +KARQGV
Sbjct: 290 TAGAPPSPSIIKQMEHLGCSVTQCYGLTELYGPHSLCEWKKEWDELPIDERAKIKARQGV 349
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGD 427
I +D+VD ET + V DG+T GEIV RG ++MLGY DP T K + G +++GD
Sbjct: 350 AYITTNYMDVVDEETMVPVPHDGKTLGEIVARGNNVMLGYHDDPGETEKAFRGGWFHSGD 409
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+ + HPDGY+EIKDR KDVIISGGENISS EIE+VLY +P V E AVVG PD WQE+P
Sbjct: 410 LAVTHPDGYIEIKDRLKDVIISGGENISSVEIENVLYEYPDVLEVAVVGIPDEKWQEVPK 469
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
A+++L+ G TT++DII +C+ + ++ PK + F ELPKTATGK+QK+VL
Sbjct: 470 AYITLRKGAK-----TTKEDIIAFCKQHLAKFKAPKVIEFT-ELPKTATGKIQKHVL 520
>gi|408418969|ref|YP_006760383.1| AMP-dependent synthetase and ligase [Desulfobacula toluolica Tol2]
gi|405106182|emb|CCK79679.1| AMP-dependent synthetase and ligase [Desulfobacula toluolica Tol2]
Length = 536
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/533 (41%), Positives = 319/533 (59%), Gaps = 22/533 (4%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
L+P+ F+ R+ + ++IY D +T++Q R +LA++L I G V+ I PN
Sbjct: 11 LSPVKFLSRSVEVYPNKAAVIYGDRHFTYAQFQERVFRLANALKKNNIGKGDKVAFICPN 70
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
P M E H+AVP+ GA+ +IN RL A I+ I+ HS++K VF D+ S + + S P
Sbjct: 71 TPPMLEAHYAVPLIGAVLVSINIRLSANEIAYIIDHSDAKAVFADNEFGSTVASISSSLP 130
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMV 193
+ + D K P D D YE LA G + + + D +
Sbjct: 131 KVGTYVNICDLDDSK-------------PLDGPD-YETFLASGSEEPVELAVTDERDVIT 176
Query: 194 LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAV 253
+NYT GTT PKGV+ ++ ++ A+ L+++ + SV LWTLPMFH NGW FTW
Sbjct: 177 INYTSGTTGQPKGVMYHHRGAYLNAIGELLEFKISPDSVYLWTLPMFHCNGWCFTWAITA 236
Query: 254 VGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP--VRILTAGS 311
+GAT+VCLRK ++ +I G+TH+C AP +L +S+ +L + I+TAG+
Sbjct: 237 MGATHVCLRKVVPEEIYNIIDSKGITHLCAAPTILISMSAYARENRLTLSGNLEIMTAGA 296
Query: 312 PPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIG 371
PP V+ ES+G + YG TE+ G + C W+P+W+ L E+A LKARQGV I
Sbjct: 297 PPAPTVIQNMESIGANILQSYGLTEVFGPHSICRWQPRWDDLDPFEKARLKARQGVPYIV 356
Query: 372 LTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMM 431
+D+VD ET V RDG+T GEIVMRG ++MLGY KD E+T+ + G +++GD+ +M
Sbjct: 357 AQHMDVVDSETMEPVPRDGKTMGEIVMRGNNVMLGYYKDIESTNDAFRGGWFHSGDLAVM 416
Query: 432 HPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVS 491
HPD Y++I DR KD+IISGGENIS+ EIE+VL++HP V E AV+ PDP W E+P AF++
Sbjct: 417 HPDNYIQIMDRQKDIIISGGENISTVEIENVLFTHPDVLEVAVIPVPDPKWGEVPKAFIA 476
Query: 492 LKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
L+ GT +DII++CR ++ R+ PK V F ELPKTATGK QK+ L
Sbjct: 477 LQNGTQPAA-----EDIIEFCRTKLARFKAPKYVEF-GELPKTATGKTQKFKL 523
>gi|444379420|ref|ZP_21178600.1| 3-methylmercaptopropionyl-CoA ligase (DmdB) [Enterovibrio sp. AK16]
gi|443676424|gb|ELT83125.1| 3-methylmercaptopropionyl-CoA ligase (DmdB) [Enterovibrio sp. AK16]
Length = 542
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/541 (40%), Positives = 332/541 (61%), Gaps = 15/541 (2%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PLTPLGF+ER A+ D +I++ D T+ Y R QLAS L++ G+
Sbjct: 9 LDRNPANYQPLTPLGFLERTASNYPDSLAIVHGDLRITYQTFYDRSRQLASQLANLGLGR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VS + N PAM E H+ VPM+G++ ++INTRL+A TI+ L H+E+K++ VD S
Sbjct: 69 GDTVSAMLANTPAMLECHYGVPMAGSVLHSINTRLEAATIAYQLDHAEAKVLIVDQEFLS 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ + + L ++P +++ +D + + P + + D YE +++GD F W+
Sbjct: 129 VAKDALEL---AERSPIVIVYSDPVWVEETK----ETPNSTYQD-YETFISQGDKSFRWL 180
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + D + +NYT GTT PKGVV ++ +++A+ ++ +PK S LWTLPMFH N
Sbjct: 181 MPEDEWDAISINYTSGTTGNPKGVVCHHRGAYLLALGNVFTAEMPKYSTYLWTLPMFHCN 240
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW F W + + T+VCLR+ A ++ + +H VTH+CGAPIV++++ S + + L
Sbjct: 241 GWCFPWTMSAICGTHVCLRQVRAEPIWHALTEHKVTHLCGAPIVMDIILSD-QTQPLSDK 299
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
V TA +PPP L + + GF V+H YG E+ G V W +W+ LP +++A LKA
Sbjct: 300 VAFFTAAAPPPESTLAKMQQAGFEVTHLYGLAEVYGPAVVNEWHDEWDDLPIQDQAKLKA 359
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQGVR + L +D+++PET V DG+T GE++ RG +M GY K+ AT G +
Sbjct: 360 RQGVRYLPLEALDVMNPETMEPVPADGKTIGEVMFRGNVVMKGYFKNLTATESAFAGGWF 419
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
++GD+ + +PDGY+++KDRSKD+IISGGENISS EIE VLY HP V AAVV P+ W
Sbjct: 420 HSGDLAVKYPDGYIQLKDRSKDIIISGGENISSIEIEDVLYKHPAVAVAAVVACPNEKWG 479
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E+P AFV L G + +E+++ +C + + VPK F +P+T TGK+QK+
Sbjct: 480 EVPFAFVELGEGK-----VVSEQELKTWCSNHMAGFKVPKHFAFA-MIPRTPTGKIQKFQ 533
Query: 544 L 544
L
Sbjct: 534 L 534
>gi|83854774|ref|ZP_00948304.1| AMP-binding protein [Sulfitobacter sp. NAS-14.1]
gi|83842617|gb|EAP81784.1| AMP-binding protein [Sulfitobacter sp. NAS-14.1]
Length = 541
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/547 (41%), Positives = 324/547 (59%), Gaps = 24/547 (4%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
D L AN PLTPL ++RAA D ++IY +++Q + RC QLAS+L++ G+
Sbjct: 8 DGLDKCAANYVPLTPLSHLKRAALVFADVTAVIYGAHRVSYTQYHARCSQLASALAAAGV 67
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
PG VV+ I PNIPA E HF VP GA+ NTINTRLD T+ IL H E++++ VD
Sbjct: 68 EPGQVVATILPNIPAQAEAHFGVPACGAVLNTINTRLDVDTVGYILDHGEARVLLVDTQF 127
Query: 122 SSLLLEVVSLF--PPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
L + PP P L+ ++D P P TY++ +A GDP
Sbjct: 128 VDLAEAACATLDGPP----PLLIEVSD---------PAAGFPATGRHTTYDDFIATGDPA 174
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F+W+ P+ + + + LNYT GTT PKGVV ++ +++ + +++ W + + V + +P+
Sbjct: 175 FNWIMPQDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVVSWRMVMRPVFMQIVPL 234
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW+ TW ++G T VC R A ++ I GVTH GAPIVLN++ ++ EA++
Sbjct: 235 FHCNGWNHTWMMPLLGGTLVCCRDITAAAIYDAIADEGVTHFGGAPIVLNMMVNATEAER 294
Query: 300 --LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
D V + TAG+PP L + E+LGF V+ YG TE G C W P W+ E
Sbjct: 295 RAFDHQVEVFTAGAPPAPATLSKIEALGFNVTQVYGLTETYGHVTECLWDPAWDSAQGAE 354
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
RA++KARQGV + E+ ++D + V D T+GEI++RG S+M GY K+P AT
Sbjct: 355 RAAIKARQGVAMPMMEEITVMDSKMA-QVPLDAATQGEIMIRGNSVMKGYFKNPAATRAA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G +++GD+ + HP+G+++I DR+KD+IISGGENISS E+E VL HP VN AAVV +
Sbjct: 414 FAGGYFHSGDLAVQHPNGHMQIADRAKDIIISGGENISSVEVEGVLMGHPDVNLAAVVAQ 473
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD W E+PCAFV LK G E +I + R + + PK VVF ELPKT+TG
Sbjct: 474 PDEKWGEVPCAFVELKPGRSG-----DEAAMIAFARDTLAGFKAPKRVVF-QELPKTSTG 527
Query: 538 KVQKYVL 544
K+QK+ L
Sbjct: 528 KIQKFEL 534
>gi|84687729|ref|ZP_01015601.1| AMP-binding protein [Maritimibacter alkaliphilus HTCC2654]
gi|84664230|gb|EAQ10722.1| AMP-binding protein [Rhodobacterales bacterium HTCC2654]
Length = 541
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/545 (42%), Positives = 313/545 (57%), Gaps = 24/545 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN PLTPL I RA + S+++ D +TW QT+ R + AS+L+ G+ P
Sbjct: 10 LDKNAANFVPLTPLSHIRRANRLFPERTSVVHADRRFTWGQTFERATRFASALARNGVAP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+ + PN A E + VP +GAI NTIN RLD T++ IL+H E+K+V D +
Sbjct: 70 GDVVATVIPNTLAQVEASWGVPAAGAILNTINVRLDVGTVAYILEHGEAKVVLCD----T 125
Query: 124 LLLEVV--SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
L VV +L + PK+V + ++P P YE+ L GDP F
Sbjct: 126 QFLSVVEKALTQMNGPKPKVVEV---------AAPEAGFPATGRHVEYEDFLDSGDPGFD 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W+ P+ + + + LNYT GTT PKGVV ++ ++ + + W + ++ L +P+FH
Sbjct: 177 WIIPEDEWESLALNYTSGTTGRPKGVVYSHRGAYLHTMGVAVAWALTPKTRYLTIVPLFH 236
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQ 299
N W TW VGAT V R A ++ I GVTH GAPIVL ++ ++ EA +
Sbjct: 237 CNNWCHTWTMPAVGATIVTCRDITAKAIYDAIADEGVTHFGGAPIVLGMIVNAKEADRRA 296
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
D V + TAG+PPPA VL E LGF V YG TE G WK +W P ER
Sbjct: 297 FDHTVEVYTAGAPPPAAVLAGIEPLGFHVCQVYGLTETYGHITETLWKDEWEDKPDTERY 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
++KARQGV + EV ++D V DG+ GEI+ RG +M GY K+PE T+K K
Sbjct: 357 AIKARQGVGHADMEEVTVLDDRM-QQVPWDGEAVGEIMARGNVVMKGYFKNPEETAKAFK 415
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+ HPDGY++I DR+KDVIISGGEN+SS E+E VL HP V AVV +PD
Sbjct: 416 GGYFHSGDIAFQHPDGYIKITDRAKDVIISGGENVSSVEVEDVLMHHPAVALCAVVAKPD 475
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+PCAFV LK G TE+++I + RA++ + PK VVF ELPKT+TGK+
Sbjct: 476 EKWGEVPCAFVELKEGAK-----VTEEELIAHTRAQLAGFKTPKKVVFT-ELPKTSTGKI 529
Query: 540 QKYVL 544
QK+ L
Sbjct: 530 QKFEL 534
>gi|78045072|ref|YP_360452.1| AMP-binding protein [Carboxydothermus hydrogenoformans Z-2901]
gi|77997187|gb|ABB16086.1| AMP-binding enzyme family protein [Carboxydothermus
hydrogenoformans Z-2901]
Length = 535
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/540 (40%), Positives = 322/540 (59%), Gaps = 22/540 (4%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
N LTPL F++RAA + +++ + +T+ + R +LAS+L +GI V+
Sbjct: 6 NRQLLTPLWFLKRAAYVFPEKTAVVDGERRFTYREFKERVNRLASALKKYGIGKWDKVAY 65
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+APNI E H+ VP++ + +INTRL + I IL HSESK++ VD +SL +
Sbjct: 66 LAPNIHPFLEGHYGVPLARGVLVSINTRLKSNEILYILNHSESKILIVDSELASL---IE 122
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDL 189
++ K+V+I + ++P D YE L +G+P+ + + +
Sbjct: 123 PIYDQLETVQKIVMI-------NQVPRETKLPAVD----YEEFLQEGEPEDLPIPIEDEF 171
Query: 190 DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249
+P+ LNYT GTT PKGV ++ ++ ++ +I+ + + S LW LPMFH NGW FTW
Sbjct: 172 EPITLNYTSGTTGFPKGVQYTHRGAYLNSLSEVIEMGLNQYSKYLWILPMFHCNGWCFTW 231
Query: 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL--DRPVRIL 307
VGAT+ C RKF+ +I K +T+ CGAP+V N ++++ +A+ L + P+R
Sbjct: 232 AVTAVGATHYCFRKFEPEAALEIIEKEKITNFCGAPVVFNAMTAAKKAEGLKFNHPIRAF 291
Query: 308 TAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AG+ P ++ + E LG V H YG TE+ G C W P+W+ L A E+A KARQGV
Sbjct: 292 IAGAAPSPTIISKMERLGVEVVHVYGLTEVYGPFTVCEWHPEWDNLSAEEKAIYKARQGV 351
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGD 427
+ EV +VD E V DG+T GEIVMRG +M GY K PE T+K G +++GD
Sbjct: 352 PMVTTGEVRVVDAEMN-DVPADGKTMGEIVMRGNGVMAGYYKAPEDTAKAFAGGWFHSGD 410
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+ +MHP+GY+EI DRSKD+IISGGENISS E+E+VLYSHP V E AVV PD W E+P
Sbjct: 411 LAVMHPNGYIEIMDRSKDIIISGGENISSVEVENVLYSHPAVYEVAVVASPDERWGEVPK 470
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDI 547
AF+ L+ G T +++I YCR ++ + VPK + F+D LPKT TGK+QK+VL ++
Sbjct: 471 AFIVLREGAS-----VTPEELIAYCREKMAGFKVPKKIEFVDALPKTPTGKIQKFVLRNL 525
>gi|423016924|ref|ZP_17007645.1| acyl-CoA synthetase [Achromobacter xylosoxidans AXX-A]
gi|338780035|gb|EGP44455.1| acyl-CoA synthetase [Achromobacter xylosoxidans AXX-A]
Length = 545
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 242/543 (44%), Positives = 323/543 (59%), Gaps = 21/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTP+ FI RAA + ++++ TW+QTY R +LA +L++ GI
Sbjct: 9 LARRDANYEPLTPVDFIARAAQVYGNRLAVVHGAVRRTWAQTYERAQRLAGALAAAGIQR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM E HF VPM GA+ NT+NTRLD ++ +L H E++ + VD +
Sbjct: 69 GDTVAVMLPNIPAMVEAHFGVPMLGAVLNTLNTRLDTPSVLFMLGHGEARALIVDTEYAE 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L + FP L +I+ + P +P A YE LA F W
Sbjct: 129 LAQRARAEFP------HLKVIS----VHDLDGAPATLPGAT---DYEAFLAAAPATFDWR 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV Y+ ++ AV ++++W +PK V LWTLP+FH N
Sbjct: 176 PPADEWDAIALNYTSGTTGDPKGVVYHYRGAYLNAVSNILEWDMPKHPVYLWTLPLFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W A NVCLRKFD TVF LIR GVTH CGAPIV + L+++P + +
Sbjct: 236 GWCFAWTVAARAGVNVCLRKFDPKTVFDLIRAEGVTHYCGAPIVQSALANAPAELRAGIA 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V + AG+ P V+ + + +GF ++H YG TE+ G CA + W+ L +RA L
Sbjct: 296 HTVCTMVAGAAPAPAVIAKMKEIGFELTHVYGLTEVYGPAAVCATQDAWDDLEDEQRALL 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGVR V + +P+T V D QT GEI+ RG M GYLK+ AT + DG
Sbjct: 356 TARQGVRYHLQAGVSVRNPDTMEEVPADEQTVGEIMFRGNICMKGYLKNERATDEAFSDG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G+M PDGY+ IKDRSKD+IISGGENISS E+E LY HP V AVV PDP
Sbjct: 416 WFHTGDLGVMTPDGYIRIKDRSKDIIISGGENISSIEVEDALYRHPAVAAVAVVAMPDPK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK G ++ T ++II +C+ +P + VP+ V F ELPKT+TGK+QK
Sbjct: 476 WGETPCAFVELKPGCNA-----TAEEIIAHCKLLLPGFKVPRAVRF-GELPKTSTGKIQK 529
Query: 542 YVL 544
+ L
Sbjct: 530 FEL 532
>gi|422318025|ref|ZP_16399313.1| AMP-dependent synthetase and ligase [Achromobacter xylosoxidans
C54]
gi|317407385|gb|EFV87349.1| AMP-dependent synthetase and ligase [Achromobacter xylosoxidans
C54]
Length = 545
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 241/538 (44%), Positives = 321/538 (59%), Gaps = 21/538 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTP+ FI RAA + ++++ TW+QTY R +LA +L++ GI G V+
Sbjct: 14 ANYEPLTPVDFIARAAQVYGNRLAVVHGAVRRTWAQTYERAQRLAGALAAAGIQRGDTVA 73
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
V+ PNIPAM E HF VPM GA+ NT+NTRLD ++ +L H E++ + VD + +
Sbjct: 74 VMLPNIPAMVEAHFGVPMLGAVLNTLNTRLDTPSVLFMLGHGEARALIVDTEYAEVAQRA 133
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
+ FP L +I+ + P +P A YE LA F W P +
Sbjct: 134 RAEFP------HLKVIS----VHDLDGAPATLPGAT---DYEAFLAAAPATFDWRPPADE 180
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + LNYT GTT PKGVV Y+ ++ AV ++++W +PK V LWTLP+FH NGW F
Sbjct: 181 WDAIALNYTSGTTGDPKGVVYHYRGAYLNAVSNILEWDMPKHPVYLWTLPLFHCNGWCFA 240
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDRPVRI 306
W A NVCLRKFD TVF LIR GVTH CGAPIV + L+++P + + VR
Sbjct: 241 WTVAARAGVNVCLRKFDPKTVFDLIRAEGVTHYCGAPIVQSALANAPAELRAGITHTVRT 300
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
+ AG+ P V+ + + +GF ++H YG TE+ G CA + WN L +RA L ARQG
Sbjct: 301 MVAGAAPAPAVIAKMKEIGFELTHVYGLTEVYGPAAVCAPQDAWNDLEDEQRALLTARQG 360
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
VR V + +P+T V D QT GEI+ RG M GYLK+ AT + G ++TG
Sbjct: 361 VRYHLQAGVSVRNPDTMEEVPADEQTVGEIMFRGNICMKGYLKNERATDEAFGGGWFHTG 420
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+G+M PDGY+ IKDRSKD+IISGGENISS E+E LY HP V AVV PDP W E P
Sbjct: 421 DLGVMTPDGYIRIKDRSKDIIISGGENISSIEVEDALYRHPAVAAVAVVAMPDPKWGETP 480
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
CAFV LK G + T ++II +C+ +P + VP+ V F ELPKT+TGK+QK+ L
Sbjct: 481 CAFVELKPGHSA-----TAEEIIAHCKLLLPGFKVPRAVRF-GELPKTSTGKIQKFEL 532
>gi|225175988|ref|ZP_03729980.1| AMP-dependent synthetase and ligase [Dethiobacter alkaliphilus AHT
1]
gi|225168576|gb|EEG77378.1| AMP-dependent synthetase and ligase [Dethiobacter alkaliphilus AHT
1]
Length = 533
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/534 (41%), Positives = 322/534 (60%), Gaps = 23/534 (4%)
Query: 13 PLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAP 72
P+TPL F+ R++ + ++++ + T+ + +R +LAS+L GIN G V+ +AP
Sbjct: 8 PMTPLNFLRRSSFVYPEKTAVLHGEQRITYKEFNQRANRLASALKGAGINEGDRVAFLAP 67
Query: 73 NIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLF 132
NIP + + H+ VP++GA+ IN RL +R ++ IL HS +K++FVD S ++ +V
Sbjct: 68 NIPPLLDAHYGVPLAGAVLVAINIRLSSREVAYILNHSGAKILFVDTAFSHVIEPIVDEL 127
Query: 133 PPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPM 192
+ +D +E+ P P YEN LA G P+ V + + +
Sbjct: 128 ESVKTIVNIRDCSDGEEL-----PGP---------LYENFLATGSPEDIPVSLEDENQTI 173
Query: 193 VLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAA 252
+NYT GTT PKGV+ ++ ++ A+ ++ + + LWTLPMFH NGW FTWG
Sbjct: 174 SINYTSGTTGLPKGVMYSHRGAYLNALGEALESQMNVYTNYLWTLPMFHCNGWCFTWGVT 233
Query: 253 VVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL--DRPVRILTAG 310
VG ++CLR ++ LI + GV+H C AP VL +++ P AK+L R + I+TAG
Sbjct: 234 AVGGMHICLRSVVVKEIYTLIEEEGVSHFCAAPTVLITMANDPAAKELRLKRKLHIVTAG 293
Query: 311 SPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTI 370
+PP V+ E +G + H YG TE G + CAW+P+W+ L +RA +K+RQGV I
Sbjct: 294 APPSPTVIRNVEDIGAEIIHVYGLTETYGPHSICAWQPEWDTLAINDRARIKSRQGVPYI 353
Query: 371 GLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGM 430
E+ +VD V DGQT GE+VMRG ++M GY D +AT + G +++GD+ +
Sbjct: 354 TALEMRVVDSSMN-DVPADGQTMGEVVMRGNNVMKGYFNDADATEEAFAGGWFHSGDLAV 412
Query: 431 MHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFV 490
M+PDGY+EIKDR KD+IISGGENIS+ E+E +L+ HP V E AVV PD W E+P AFV
Sbjct: 413 MNPDGYIEIKDRKKDIIISGGENISTVELEHLLFRHPHVQEVAVVAIPDEKWGEVPKAFV 472
Query: 491 SLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
K GTD TE++IIQYCR I RY PK+V F D LPKT+TGK++KYVL
Sbjct: 473 VPKPGTDP-----TEEEIIQYCRDNIARYKCPKSVEFGD-LPKTSTGKIKKYVL 520
>gi|238007468|gb|ACR34769.1| unknown [Zea mays]
Length = 483
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/478 (46%), Positives = 305/478 (63%), Gaps = 9/478 (1%)
Query: 77 MYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP-PH 135
MYELHF+VPM+GA+ T+NTR DA +S++LKHSE+K+ V+ ++ + + L
Sbjct: 1 MYELHFSVPMTGAVLCTLNTRHDAAMVSVLLKHSEAKVFLVESQFHAVARDALRLLADAK 60
Query: 136 SKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLN 195
+ P ++ ++D SS+ + V YE +L F P + DP+ LN
Sbjct: 61 DRLPLVITVSDPSSSSSTGDGRGSNDGSVAVAEYEALLRSAPRDFEIRWPADERDPISLN 120
Query: 196 YTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVG 255
YT GTTS PKGV+ ++ F+ + +++ + V LWT+PMFH NGW W A G
Sbjct: 121 YTSGTTSRPKGVIYSHRGAFLNTLATVLVNEMATMPVYLWTVPMFHCNGWCMVWATAAQG 180
Query: 256 ATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLDRPVRILTAGSPP 313
T+VC+ VF I +HGVT+M GAP VL++L+++P A K L R VRI T G+PP
Sbjct: 181 GTSVCIGSVSPGVVFDHIVRHGVTNMGGAPTVLSMLANAPAADRKPLPRRVRISTGGAPP 240
Query: 314 PAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLT 373
P VL + + LGF V+HGYG TE G +C WKP+W+ LP ERA +KA QGV +
Sbjct: 241 PPQVLAKMDELGFDVAHGYGLTETYGPATTCVWKPEWDALPPAERARMKALQGVAHAMVQ 300
Query: 374 EVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHP 433
EV I DP + ++ DG+ GE+++RG ++M GY KD AT + M+ G TGD+G+ HP
Sbjct: 301 EVAIKDPASMETLPSDGRAVGEVMLRGNTVMGGYYKDAGATEEAMRGGWLRTGDLGVRHP 360
Query: 434 DGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLK 493
+GY+++KDRSKD+IISGGENISS E+ESVL+ HP V +AAVV RPD W E PCAFV+L+
Sbjct: 361 NGYIQLKDRSKDIIISGGENISSIEVESVLFGHPAVLDAAVVARPDDHWGEAPCAFVTLR 420
Query: 494 TGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSM 551
G + T DII++CRAR+P YM P+TVVF D LPKT+TGK QKY+L + A +M
Sbjct: 421 DGARA-----TADDIIRFCRARLPHYMAPRTVVFSD-LPKTSTGKTQKYLLREKARAM 472
>gi|149201948|ref|ZP_01878922.1| AMP-dependent synthetase and ligase [Roseovarius sp. TM1035]
gi|149144996|gb|EDM33025.1| AMP-dependent synthetase and ligase [Roseovarius sp. TM1035]
Length = 542
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/552 (41%), Positives = 324/552 (58%), Gaps = 23/552 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN LTPL + RAA D +++Y T T+++ + R +LAS+L GI P
Sbjct: 10 LEKCAANFVALTPLSHLRRAAQIFPDREALVYRGTRRTYAEYHARVSRLASALVKLGIEP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+ + PNIPA E HF VP GA+ N INTRL+A TI+ IL H +++V D
Sbjct: 70 GDVVATLLPNIPAHCEAHFGVPACGAVLNAINTRLEADTIAYILDHGGARVVLCDPQFLP 129
Query: 124 LLLEVVSLF--PPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
+L + + L PP P +V + DD + YE +LA GDP F+
Sbjct: 130 VLAQAIELMEGPP----PGVVEVADDAAGVHAHG---------HYMEYEELLASGDPDFA 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W+ P+ + + + LNYT GTT PKGVV ++ +++ + +++ W +P+ L +P+FH
Sbjct: 177 WIMPEDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVVSWQLPRYPTYLTIVPLFH 236
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-- 299
N W+ W ++G VC R A ++ I GVTH GAPIVLN++ + E ++
Sbjct: 237 CNNWNHVWLMPMLGGRVVCCRDITARAIYDAIADEGVTHFGGAPIVLNMIVHAKEGERRA 296
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
D V + TAG+PPPA L E LGF V+ YG TE G C W+ W+ LP ER
Sbjct: 297 FDHVVDVFTAGAPPPAATLAAIEPLGFTVTQVYGLTETYGHVTECLWQDGWDALPEDERY 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
++KAR GV + E+ +DPET + DG T GEI++RG S+M GYLK+P AT++ +
Sbjct: 357 TIKARTGVLMPMMEEITAMDPETMAQIPMDGATLGEIMIRGNSVMKGYLKNPAATAEAFR 416
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+ HPDGYL+I DR+KD+IISGGENISS E+E VL HP V AVV +PD
Sbjct: 417 GGYFHSGDIAFQHPDGYLKIADRAKDIIISGGENISSVEVEGVLMRHPAVMLCAVVAKPD 476
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+PCAFV LK G + +E ++I + R R+ + PK VVF ELPKT+TGK+
Sbjct: 477 EKWGEVPCAFVELKDGAE-----VSEAELIAFARERLAGFKTPKAVVF-QELPKTSTGKI 530
Query: 540 QKYVLGDIANSM 551
QK+ L A ++
Sbjct: 531 QKFELRQSARAL 542
>gi|409402893|ref|ZP_11252351.1| AMP-dependent synthetase and ligase [Acidocella sp. MX-AZ02]
gi|409128608|gb|EKM98503.1| AMP-dependent synthetase and ligase [Acidocella sp. MX-AZ02]
Length = 540
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/543 (41%), Positives = 333/543 (61%), Gaps = 22/543 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L +PAN PL+PL F+ RA D ++ ++D Y+++Q R + AS++ + G+ P
Sbjct: 9 LDRDPANFVPLSPLSFLRRAVRIFPDKIAVTHHDRAYSYTQFADRARRFASAIMAAGVKP 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V++PN P E H+AVP++G + + INT LDA I+ IL+H+E+KL+ VD +
Sbjct: 69 GEAVAVLSPNGPVALEAHYAVPLAGCVLSMINTLLDAPAIAFILEHAEAKLLLVDREWAP 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ +L+ EI+ ++PP A YE+ +A P W
Sbjct: 129 KAQAALA-----LLANPPILV----EIADEAAPPGLTLGAP---EYEDWIAP-HPPAPWR 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + + +NYT GTT PKGVV ++ ++ A+ + ++S LWTLPMFH +
Sbjct: 176 LPADEWEAIAVNYTSGTTGNPKGVVYHHRGAYLGALSVAFMVNLTQESAYLWTLPMFHCS 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW++TW +G T+VCLRK D +F I +H VTHMCGAPIVL +L ++PE + L
Sbjct: 236 GWTYTWAVTALGGTHVCLRKIDPAAIFEKIERHYVTHMCGAPIVLGMLINAPEGVKRVLA 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
R V + AG+ PP+ ++ TE LGF V H YG TE+ G + C +P W +L RA L
Sbjct: 296 RQVIVAIAGAAPPSAIIEGTERLGFSVRHVYGLTEVYGPSALCEPQPDWQELDLTARARL 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGV I ++ ++DP+ G +V DG+T GE+ +G +M GYLK+P+AT + ++G
Sbjct: 356 TARQGVPGITQEDLSVLDPQ-GATVPADGRTIGELAFKGNVVMKGYLKNPKATREAFRNG 414
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ TGD+G++HPDGY+EIKDR+KD+IISGGENISS E+E VLY HP V EAAVV PD
Sbjct: 415 WFLTGDLGVLHPDGYVEIKDRAKDIIISGGENISSLEVEEVLYRHPAVREAAVVAVPDEK 474
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+P A ++LK G E ++ +CRA + + +PK F DELPKT+TGK+QK
Sbjct: 475 WGEVPLAVIALKEGAQ-----VNEAELTSFCRAHLAGFKIPKLYRF-DELPKTSTGKIQK 528
Query: 542 YVL 544
++L
Sbjct: 529 HIL 531
>gi|430810754|ref|ZP_19437866.1| acyl-CoA synthetase, partial [Cupriavidus sp. HMR-1]
gi|429496761|gb|EKZ95322.1| acyl-CoA synthetase, partial [Cupriavidus sp. HMR-1]
Length = 491
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/503 (45%), Positives = 304/503 (60%), Gaps = 31/503 (6%)
Query: 49 CLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILK 108
C +LAS+L+ G+ G V+ + PN PAM E HF VPM+GA+ N +N RLDA + +L+
Sbjct: 1 CRRLASALTRAGVGKGDTVAALLPNTPAMVEAHFGVPMAGAVLNALNIRLDAANLVFMLR 60
Query: 109 HSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITD----DKEISSSSSPPPRIPPAD 164
H E+K++ D + + + K++ + D D E
Sbjct: 61 HGEAKVLLAD----TEFADAARQMAREVRGLKVIAVEDVLGPDAE--------------R 102
Query: 165 FVDT-YENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLI 223
F DT YE+ LA GDP+F W P + D + LNYT GTT PKGVV ++ + A+ +++
Sbjct: 103 FGDTDYESFLASGDPEFDWKMPGDEWDAIALNYTSGTTGDPKGVVYHHRGAAMNAISNIL 162
Query: 224 DWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCG 283
+W + K V LWTLPMFH NGW F W A NVCLRKF+ VF L+R GVTH C
Sbjct: 163 EWDMAKHPVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRKFEPKLVFDLMRDEGVTHYCA 222
Query: 284 APIVLNLLSSSPEA--KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVN 341
APIV L ++P + + L PVR + AG+PPPA VL + E++GF +SH YG TE+ G
Sbjct: 223 APIVHTALVNAPPSWREGLRGPVRGMVAGAPPPAAVLAQMEAMGFDLSHVYGLTEVYGPA 282
Query: 342 VSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGG 401
CA + W+ + ERA LKARQGVR + V ++DP+T V RDG+T GEI+ RG
Sbjct: 283 AVCAEQDSWHTVSQEERAVLKARQGVRYHLQSGVTVLDPDTMQPVPRDGETIGEIMFRGN 342
Query: 402 SLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIES 461
M GYLK+ +AT + G ++TGD+G+ PDGY++IKDRSKD+IISGGENISS E+E
Sbjct: 343 ICMKGYLKNDKATREAFAGGWFHTGDLGVCMPDGYIKIKDRSKDIIISGGENISSVEVED 402
Query: 462 VLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMV 521
LY HP V AAVV +PD W E PCAFV LK G T +++I +CR + + V
Sbjct: 403 ALYRHPAVLAAAVVAQPDAKWGETPCAFVELKDGAS-----VTAEELIAHCRTLLAGFKV 457
Query: 522 PKTVVFIDELPKTATGKVQKYVL 544
PK V F LPKT+TGK+QK+ L
Sbjct: 458 PKAVYF-GPLPKTSTGKIQKFEL 479
>gi|359797325|ref|ZP_09299911.1| acyl-CoA synthetase [Achromobacter arsenitoxydans SY8]
gi|359364826|gb|EHK66537.1| acyl-CoA synthetase [Achromobacter arsenitoxydans SY8]
Length = 551
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 241/543 (44%), Positives = 316/543 (58%), Gaps = 21/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN LTP+ FI RAA + +I++ T TW+QTY R +LA +L+ GI
Sbjct: 9 LARREANYEALTPVDFIARAAQVYGNRLAIVHGKTRRTWAQTYERAQRLAGALAQAGIQR 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ PNIPAM E HF VPM GA+ NT+NTRLD ++ +L H E++ + VD +
Sbjct: 69 GDTVAVMLPNIPAMVEAHFGVPMLGAVLNTLNTRLDTPSVLFMLGHGEARALIVDTEYAD 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ + FP H K V+ D E P +P A YE LA + W
Sbjct: 129 IAQRARAEFP-HLK----VISVHDLE-----GAPATLPGAT---DYEAFLAAAPAAYDWK 175
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + D + LNYT GTT PKGVV Y+ ++ AV ++++W +PK V LWTLP+FH N
Sbjct: 176 PPADEWDAIALNYTSGTTGDPKGVVYHYRGAYLNAVSNILEWDMPKHPVYLWTLPLFHCN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW F W A NVCLRKFD TVF L R GVTH CGAPIV + L+++P + +
Sbjct: 236 GWCFAWTVAARAGVNVCLRKFDPKTVFDLTRDEGVTHYCGAPIVQSALANAPADMRAGIT 295
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
VR + AG+ P V+ + +GF ++H YG TE+ G CA + W+ L RA L
Sbjct: 296 HTVRTMVAGAAPAPAVIDKMREIGFELTHVYGLTEVYGPAAVCAHQDAWDALDPERRALL 355
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
ARQGVR V + +PET V D +T GE++ RG M GYLK+ AT G
Sbjct: 356 TARQGVRYHLQAGVSVRNPETMQEVPPDEETIGEVMFRGNICMKGYLKNERATEDAFAGG 415
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G+M DGY+ IKDRSKD+IISGGENISS E+E LY HP V AVV PDP
Sbjct: 416 WFHTGDLGVMTADGYVRIKDRSKDIIISGGENISSIEVEDALYRHPAVAAVAVVAMPDPK 475
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV LK G + T +II +C+ +P + VP+ V F ELPKT+TGK+QK
Sbjct: 476 WGETPCAFVELKPGCSA-----TADEIIAHCKLLLPGFKVPRAVRF-GELPKTSTGKIQK 529
Query: 542 YVL 544
+ L
Sbjct: 530 FEL 532
>gi|297842385|ref|XP_002889074.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334915|gb|EFH65333.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 549
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/548 (41%), Positives = 336/548 (61%), Gaps = 24/548 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTP+ F+ERAA A S++Y D YTW QT RC++LAS+LS G++ VV+
Sbjct: 9 ANYVPLTPISFLERAAVAFGPRTSVVYGDIQYTWRQTRDRCVRLASALSDLGLSRHDVVA 68
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+APN+PA+ EL+F PM+G++ +NT +++ +++ L+ ++ K+ FVD S+ E
Sbjct: 69 ALAPNVPALCELYFGAPMAGSVLCVLNTTFNSQMLAMALEKTKPKVFFVDSEFLSVAEES 128
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
+SL + P ++ IT+++ S + YE+ L+ G+P F +RP +
Sbjct: 129 LSLLSNIEEQPLIITITENQTEKSK------------YEEYEDFLSSGNPNFIPLRPVDE 176
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
DP+ LN+T GTTS PK VV ++ ++ A + + + V LWT+PM+H +GWS
Sbjct: 177 CDPIALNFTSGTTSTPKCVVYSHRGAYLNATATGVMNEMKPMPVYLWTVPMYHCSGWSSV 236
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP--VRI 306
W A G NVCLR+ + +F I KH VT+ G+P VLN+++++P++ + P V++
Sbjct: 237 WTVAAFGGVNVCLREVNDRVIFDSIVKHKVTNFGGSPPVLNMIANAPDSVKKSFPWTVQV 296
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
++ GS PP V+LR + LGF V YG TE+ G+ +C W P+W LP E + LKAR G
Sbjct: 297 MSGGSSPPE-VMLRLKKLGFKVMMAYGCTEVYGLGTACLWMPEWENLPEEESSRLKARDG 355
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
+ VD++DP T SV DG+T G I++RG ++M GY KD EAT + G +++
Sbjct: 356 LNHFAKEAVDVLDPTTMKSVPHDGKTIGVIILRGNTVMSGYFKDKEATEAAFRGGWFWSR 415
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+G++ PDGY++ KDRS+DVI GGE + S EIE +LYSHP V +AAVVGRPD E
Sbjct: 416 DMGVIDPDGYIQYKDRSQDVITCGGEIMGSKEIEGILYSHPAVYDAAVVGRPDEALGESM 475
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARI---PRYMVPKTVVFIDELPKTATGKVQKYV 543
CAFV L G E++II++C +I MVPKTVVF D +PK TGK++K V
Sbjct: 476 CAFVKLIEGA-----EAKEEEIIEFCERKIGIKNMKMVPKTVVFSD-VPKIHTGKIRKNV 529
Query: 544 LGDIANSM 551
L ++A +M
Sbjct: 530 LREMAKNM 537
>gi|85703679|ref|ZP_01034783.1| AMP-binding protein [Roseovarius sp. 217]
gi|85672607|gb|EAQ27464.1| AMP-binding protein [Roseovarius sp. 217]
Length = 542
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/552 (42%), Positives = 323/552 (58%), Gaps = 23/552 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN LTPL + RAA ++IY DT T+++ + R +LAS+L GI P
Sbjct: 10 LEKCAANFVALTPLSHLRRAAHLFPTREALIYRDTRRTYAEYHARVSRLASALVKLGIEP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+ + PNIPA E HF VP GA+ N INTRL+A TI+ IL H +++V D
Sbjct: 70 GDVVATLLPNIPAHCEAHFGVPACGAVLNAINTRLEADTIAYILDHGGARVVLCDPQFLP 129
Query: 124 LLLEVVSLF--PPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
L + + L PP P +V + DD + YE +LA GDP F
Sbjct: 130 TLAQAIDLMEGPP----PGVVEVADDAAGVHAHG---------HYMEYEELLASGDPDFP 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W+ P+ + + + LNYT GTT PKGVV ++ +++ + +++ W +P+ L +P+FH
Sbjct: 177 WIMPEDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVVSWDLPRYPTYLTIVPLFH 236
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQ 299
N W+ W ++GAT VC R A ++ I GVTH GAPIVLN++ + E ++
Sbjct: 237 CNNWNHVWLMPMLGATLVCCRDITAKAIYDAIADEGVTHFGGAPIVLNMIVNAKDSERRR 296
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
D V + TAG+PPPA L E LGF V+ YG TE G C W+ W+ LP ER
Sbjct: 297 FDHIVDVFTAGAPPPAATLAAIEPLGFKVTQVYGLTETYGHVTECLWQEAWDDLPDDERY 356
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
S+KAR GV + ++ +DPET + DG++ GEI++RG S+M GYLK+P AT +
Sbjct: 357 SIKARTGVLMPMMEDITAMDPETMTQIPMDGESLGEIMIRGNSVMKGYLKNPAATEEAFH 416
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+ HPDGYL+I DR+KD+IISGGENISS E+E VL HP V AVV +PD
Sbjct: 417 GGYFHSGDIAFQHPDGYLKIADRAKDIIISGGENISSVEVEGVLMRHPAVMLCAVVAKPD 476
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+PCAFV LK G+ +E ++I + R R+ + PK VVF ELPKTATGK+
Sbjct: 477 EKWGEVPCAFVELKD-----GVTVSEAELIAFARERLASFKTPKAVVF-QELPKTATGKI 530
Query: 540 QKYVLGDIANSM 551
QK+ L A ++
Sbjct: 531 QKFELRQSARAL 542
>gi|339502033|ref|YP_004689453.1| short-chain-fatty-acid--CoA ligase FadK [Roseobacter litoralis Och
149]
gi|338756026|gb|AEI92490.1| putative short-chain-fatty-acid--CoA ligase FadK [Roseobacter
litoralis Och 149]
Length = 540
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/543 (39%), Positives = 321/543 (59%), Gaps = 21/543 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTPL ++RA+ + +++Y D ++ + R QLAS+L++ G+ PG VV+
Sbjct: 15 ANHVPLTPLSHLKRASVVFAEHTAVVYGDVRRSYGEHAARATQLASALAAKGVAPGEVVA 74
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PN+PA E HF VP GA+ NTINTRLD T++ I +H E+K+V VD S L++
Sbjct: 75 TLLPNVPAQVEAHFGVPACGAVLNTINTRLDVDTVTYIFEHGEAKMVLVD----SQFLDL 130
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
+ +P ++ D +S + TYE+++ G F W+ P+ +
Sbjct: 131 AEAACANLASPPTLIEVPDAVAGIEASGRHQ--------TYEDLVTGGTTDFEWIMPQDE 182
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
+ + LNYT GTT PKGVV ++ +++ + ++I W + + +P+FH NGW+
Sbjct: 183 WESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVISWRMTLHPTFMQIVPLFHCNGWNHA 242
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRI 306
W ++G T VC R AP +F I VTH GAPIVLN+L ++P E + +D PV I
Sbjct: 243 WMMPLIGGTLVCCRDITAPAIFDAIADEKVTHFGGAPIVLNMLVNAPMEERRAIDHPVEI 302
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
TAG+PP L + E+LGF V+ YG TE G C W+ +W+ A +A++K+RQG
Sbjct: 303 FTAGAPPAPATLSKIEALGFNVTQVYGLTETYGHVTECLWRSEWDGHEADAKAAIKSRQG 362
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
V + ++ ++D + V D T+GEI++RG S+M GY K+P+ATS+ G +++G
Sbjct: 363 VPFPMMEDIVVMDADM-TPVPTDASTQGEIMIRGNSVMKGYYKNPQATSEAFAGGYFHSG 421
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+ + H D Y++I DR+KD+IISGGENISS E+E VL +H V AAVV +PD W E+P
Sbjct: 422 DIAVQHGDSYIQIADRAKDIIISGGENISSVEVEGVLMAHDDVMLAAVVAKPDDKWGEVP 481
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546
CAFV LK+G E +I + R + + PK VVF ELPKT+TGK+QK+ L
Sbjct: 482 CAFVELKSGA-----TVDEAGLIAFSRQTLAGFKAPKKVVF-QELPKTSTGKIQKFELRK 535
Query: 547 IAN 549
+A
Sbjct: 536 LAE 538
>gi|84514414|ref|ZP_01001778.1| AMP-binding protein [Loktanella vestfoldensis SKA53]
gi|84511465|gb|EAQ07918.1| AMP-binding protein [Loktanella vestfoldensis SKA53]
Length = 541
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/543 (42%), Positives = 319/543 (58%), Gaps = 20/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTPL ++RA + +++Y T++Q +RR +LAS+L G+ P
Sbjct: 10 LGKRAANHVPLTPLSHLQRAGLVFANREALVYGTARLTYAQYHRRVTRLASALVKAGVQP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+ I PNIPA E F VP GA+ NTIN RLD TI+ IL H E+K+V VD S
Sbjct: 70 GDVVATILPNIPAQSEAAFGVPACGAVLNTINIRLDVDTIAYILDHGEAKVVLVD--SQF 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L + ++ TP ++ + DD ++ YE+ LA GDP F+W+
Sbjct: 128 LPQAMAAIDQMQGPTPLVIEVPDDHAGILTTGTQ---------QNYEDFLATGDPDFAWI 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + + LNYT GTT PKGVV ++ +++ + + I W +P L +P+FH N
Sbjct: 179 LPHDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTLGTAISWEMPTFVRYLQIVPLFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL-SSSPEAK-QLD 301
GW+ TW +G T +C R A T++ I HG TH GAPIVLNLL ++ PE + Q D
Sbjct: 239 GWNHTWMLPALGGTAICCRDITASTIYDAIADHGATHFGGAPIVLNLLVNAKPEHRRQFD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V++ TAG+PP L LGF V YG TE G C W P W+ LP E+A++
Sbjct: 299 HMVQVFTAGAPPAPATLAAIGKLGFHVKQVYGLTETFGHVTECIWDPAWDTLPEAEQAAI 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGV + +V +V+ + V DG T+GEIVMRG ++M GYLK+P+AT + G
Sbjct: 359 KARQGVGFPIMEDVTVVNDQME-PVPWDGTTQGEIVMRGNAVMKGYLKNPDATERAFAGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++ D+ + HPDG ++I DR+KD+IISGGENISS E+E+ L H VN AVV + D
Sbjct: 418 YFHSEDLAIQHPDGMIQISDRAKDIIISGGENISSVEVEAALMHHAAVNLCAVVAQSDEK 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W EIPCAFV LK G + TE +II + R R+ + PK VVF D LPKT+TGK+QK
Sbjct: 478 WGEIPCAFVELKDGATA-----TEAEIIAFARERLAGFKCPKRVVFQD-LPKTSTGKIQK 531
Query: 542 YVL 544
+ L
Sbjct: 532 FEL 534
>gi|71064760|ref|YP_263487.1| AMP-dependent synthetase/ligase [Psychrobacter arcticus 273-4]
gi|71037745|gb|AAZ18053.1| probable AMP-dependent synthetase and ligase family protein
[Psychrobacter arcticus 273-4]
Length = 554
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/562 (40%), Positives = 325/562 (57%), Gaps = 39/562 (6%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIY-----NDTTYTWSQTYRRCLQLASSLSS 58
L N AN PLTP+ FI R+A D +IIY N+ T TW QTY RC QLA L
Sbjct: 8 LGKNAANHQPLTPIDFIIRSAQVYPDRTAIIYDDLEHNNLTQTWQQTYDRCRQLADGLRK 67
Query: 59 FGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD 118
G++ V+V+ PN PAM E F VPMSG + T+NTRLD +S L+HSE+K++ +D
Sbjct: 68 LGVDKNDTVAVMMPNTPAMVECAFGVPMSGGVLCTLNTRLDINALSFCLQHSEAKVLILD 127
Query: 119 HLSSSLLLEVVSLFPPHSKT-----PKLVLITDDKEISSSSSPPPRIPPADFVDTYENML 173
S F H++ P L++I + ++ R +YE ++
Sbjct: 128 -----------SEFAEHAEMIDETFPNLIVI----HATDAAVDIERFGQM----SYEELI 168
Query: 174 AKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVL 233
A D +W +P + D + LNYT GTT PKGVV ++ + AV +++DW +PK +
Sbjct: 169 ASADSLDNWEKPTDEWDAIALNYTSGTTGKPKGVVYHHRGATLNAVSNILDWDMPKHPMY 228
Query: 234 LWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSS 293
LWTLP+FH NGW F W A NVCLRK DA + LI KH V+H C AP+V N+++
Sbjct: 229 LWTLPLFHCNGWCFPWTIAERAGVNVCLRKIDADLILQLIAKHKVSHYCSAPVVHNMIAG 288
Query: 294 S-PEAKQ-LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWN 351
PE K+ ++ V+ AG+PP +L E++GF +SH YG TE+ G CA + +W
Sbjct: 289 GKPEYKEAINHEVKGWVAGAPPSETMLAAMEAMGFHISHVYGLTEVYGPVTICAEQQEWA 348
Query: 352 KLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDP 411
L RA K+RQGV + ++ ++ T V DG+ GE+ +RG +M GYLK
Sbjct: 349 TLDVAGRAQKKSRQGVTSHLMSGFELFKQGTTEPVAADGKEMGELALRGNMVMKGYLKSR 408
Query: 412 EATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNE 471
+AT + DG + TGD+G+ +PDGY++I DR KD+IISGGENISS E+E+VLY P +
Sbjct: 409 KATEEAFTDGWFRTGDLGVKYPDGYIKIMDRLKDIIISGGENISSIEVENVLYKMPEIQS 468
Query: 472 AAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKD-IIQYCRARIPRYMVPKTVVFIDE 530
AVV P W E+P AF+ + G+ T ++D ++ +C+ + + +PK ++F E
Sbjct: 469 CAVVAAPHDKWGEVPVAFIEIHAGS------TLQRDNVMAHCKQHLASFKMPKYIIFA-E 521
Query: 531 LPKTATGKVQKYVLGDIANSMS 552
+PKT+TGKVQK+ L A S++
Sbjct: 522 IPKTSTGKVQKFELRQAAKSLA 543
>gi|398831198|ref|ZP_10589377.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Phyllobacterium sp. YR531]
gi|398212766|gb|EJM99368.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Phyllobacterium sp. YR531]
Length = 548
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/545 (41%), Positives = 323/545 (59%), Gaps = 18/545 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L NPAN PLTPL ++ERAA +II+ + YRR QLAS+L++ GI
Sbjct: 9 LDRNPANHQPLTPLTYLERAARVYPTRTAIIHGSQRTDYEHFYRRTRQLASALAARGIGK 68
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+ N P M E HF VPM+ A+ +++NTRLDA I+ L H+E+K+ VD S
Sbjct: 69 GDTVTVMLSNTPPMLEAHFGVPMTKAVLHSLNTRLDAAIIAFQLDHAETKIAIVDTEFSK 128
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSS--SPPPRIPPADFVDTYENMLAKGDPQFS 181
+ E + L +K L++ D E + PRI D YE L GDP+++
Sbjct: 129 VFSEALKL----AKVKPLIIDFVDAEYPDDAPHEQGPRIGELD----YEAFLQSGDPEYA 180
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
W P + D + LNYT GTT PKGVV ++ ++ +++ + + V LWTLPMFH
Sbjct: 181 WSMPDDEWDAITLNYTSGTTGNPKGVVYHHRGAALMGYGNIVASGLGRYPVYLWTLPMFH 240
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD 301
NGW F W A+ T+VCLR A ++ I HGVTH+CGAPIV++ L ++ E ++
Sbjct: 241 CNGWCFPWTLALQFGTHVCLRWVRAKPIYDAIADHGVTHLCGAPIVMSTLINAGEREKRT 300
Query: 302 RP--VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
P V TA + PP +L GF V+H YG TE G V W+ +WN+L + +A
Sbjct: 301 FPQTVSFNTAAASPPESILAGMAEAGFEVTHLYGLTETYGPAVVNEWQDEWNELESSSKA 360
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+ KARQGVR L + ++DPET V DG+T GE++ RG +M GYLK+ +A+ +
Sbjct: 361 ARKARQGVRYTPLEGLAVLDPETMNPVPPDGETIGEVMFRGNIVMKGYLKNRQASDEAFA 420
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+G+M+PDGY+++KDRSKD+IISGGENISS E+E LY P V+ AVV D
Sbjct: 421 GGWFHSGDLGVMYPDGYIQLKDRSKDIIISGGENISSIEVEDALYKFPGVSACAVVACLD 480
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E P AFV +K G + T ++I +CR + + P+ VVF +E+PKT+TGK+
Sbjct: 481 DKWGETPMAFVEMKQ-----GYVATADELIAHCRGLLAGFKCPRHVVF-EEIPKTSTGKI 534
Query: 540 QKYVL 544
QK+ L
Sbjct: 535 QKFEL 539
>gi|333369965|ref|ZP_08462049.1| acyl-CoA synthetase [Psychrobacter sp. 1501(2011)]
gi|332968807|gb|EGK07855.1| acyl-CoA synthetase [Psychrobacter sp. 1501(2011)]
Length = 560
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/557 (39%), Positives = 319/557 (57%), Gaps = 20/557 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTT-----YTWSQTYRRCLQLASSLSS 58
L AN PLTP+ FI R A+ + SIIY+D YTWSQTY RC LA L
Sbjct: 8 LNKTDANHQPLTPVQFIARTASVYPNKTSIIYDDLVHAPIHYTWSQTYARCRNLAHGLRK 67
Query: 59 FGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD 118
GI+ V+++APN PAM E F VPMS + T+NTRLD ++ L+HSE+KL+ +D
Sbjct: 68 LGISKDDTVAIMAPNTPAMVEAAFGVPMSQGVLCTLNTRLDIGALTFCLQHSEAKLLIID 127
Query: 119 HLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP 178
S E + P P L+LI + + P ++ + + E +
Sbjct: 128 ----SEFAEHID--PIEETFPHLILIHATDRAFAETKPFGKMSYEELIQFGEFDDEQAAK 181
Query: 179 QFSW-VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
F + P + D + LNYT GTT PKGVV ++ + AV +++DW +PK S LWTL
Sbjct: 182 DFDRTIYPADEWDAIALNYTSGTTGKPKGVVYHHRGATLNAVSNILDWDMPKHSTYLWTL 241
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
P+FH NGW F W A NVCLR+ DA + LI K+ ++H C APIV N++S+ E+
Sbjct: 242 PLFHCNGWCFPWTVAERAGINVCLRQIDANLILKLIAKYNISHYCAAPIVHNMISTGDES 301
Query: 298 --KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
+ + V AG+PP +L + E++ F ++H YG TE+ G CA W +L
Sbjct: 302 LKQAITHTVNGFVAGAPPSEAMLEKMEAMNFQITHVYGLTEVYGPVTICAEHDDWQQLSV 361
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
ERAS K+RQG + +T +++ T V DG+ GE+ +RG +M GYLK+ +AT
Sbjct: 362 SERASKKSRQGTTSHLMTGFEVLKQGTNEPVAADGEEMGELALRGNMVMKGYLKNSKATE 421
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
+ G + TGD+G+ H DGY++I DR KD+IISGGENISS EIE++LY P V+ VV
Sbjct: 422 EAFAGGWFRTGDLGVKHADGYIKIMDRLKDIIISGGENISSIEIENILYGLPQVSSCGVV 481
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
+ W E+P AF+ + + G T + +I++CR + ++ VPK V+F E+PKT+
Sbjct: 482 AASNDKWGEVPVAFIEI-----AEGATLTREQVIEHCRQHLAKFKVPKHVIFC-EIPKTS 535
Query: 536 TGKVQKYVLGDIANSMS 552
TGK+QK+ L + A SM+
Sbjct: 536 TGKIQKFELRNAAQSMA 552
>gi|88811694|ref|ZP_01126948.1| acyl-CoA synthase [Nitrococcus mobilis Nb-231]
gi|88791085|gb|EAR22198.1| acyl-CoA synthase [Nitrococcus mobilis Nb-231]
Length = 532
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/539 (42%), Positives = 318/539 (58%), Gaps = 20/539 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN L+PL FIER+A + ++I+ + +W QTY R +LAS+L G+ G V+
Sbjct: 4 ANYGALSPLTFIERSAAVFPERTAVIHGELQRSWEQTYERVRRLASALRGRGVERGDTVA 63
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
V+ N P M E HFAVPM GA+ N ++ +ARTI+ IL+ ++++ D + + +
Sbjct: 64 VMLANTPEMLEAHFAVPMVGAVLNALDVHQEARTIAFILQDCGARVLLTDTEFAKTIEKA 123
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
++L P +P LV+ DD + YE +LA+GDP F W P +
Sbjct: 124 LALLP----SPPLVIDVDDPQGGGGEG--------LGKLGYEALLAEGDPTFIWEPPPDE 171
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
+ + LNYT GTT+ P G+V ++A ++ AV ++ W + + LWTLPMF NGW F
Sbjct: 172 WEAIALNYTPGTTANPNGIVYHHRAAYLKAVSHVLVWGLAPHPIYLWTLPMFDCNGWCFP 231
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAK--QLDRPVR 305
W + +VCLR+ VF IR+H V+H+C P VLN LL+ S E + + D PV+
Sbjct: 232 WTITAMAGVHVCLREARGEAVFEAIRRHRVSHLCATPAVLNALLAVSVERRPGKFDHPVK 291
Query: 306 ILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
++ + P A V+ E++G ++H YG TE G CAW P+WN P ERA LKARQ
Sbjct: 292 VMAGAAAPSAAVVEGIEAMGMEITHVYGLTEAGGPAAVCAWHPEWNARPREERARLKARQ 351
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYT 425
GVR L + + DP T + V +DG+T GEI +RG ++M GY K +AT + G ++T
Sbjct: 352 GVRYPMLDGLMVADPHTLVPVPKDGRTIGEIFIRGNTVMKGYFKSAQATEEAFDGGWFHT 411
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+ + HPDGY+EIKDR+KD+I E SS EIESVL HP + EAAVV R D E
Sbjct: 412 GDLAIWHPDGYMEIKDRAKDIITLDDEPSSSLEIESVLCRHPAIMEAAVVARMDEELGET 471
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
PCAFV LK D+ + TE II++CR + MVPKTVVF ELPKT+TGKVQK+ L
Sbjct: 472 PCAFVVLK--PDAANVGATE--IIEFCRQHMAHSMVPKTVVF-GELPKTSTGKVQKFKL 525
>gi|93005024|ref|YP_579461.1| AMP-dependent synthetase and ligase [Psychrobacter cryohalolentis
K5]
gi|92392702|gb|ABE73977.1| AMP-dependent synthetase and ligase [Psychrobacter cryohalolentis
K5]
Length = 554
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/563 (40%), Positives = 324/563 (57%), Gaps = 41/563 (7%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIY-----NDTTYTWSQTYRRCLQLASSLSS 58
L N AN PLTP+ FI R+A D +IIY N+ T TW QTY RC QLA L
Sbjct: 8 LGKNAANHQPLTPIDFIIRSAQVYPDRTAIIYDDLEHNNLTQTWQQTYDRCRQLADGLRK 67
Query: 59 FGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD 118
GI+ V+V+ PN PAM E F VPMSG + T+NTRLD ++ L+HSE+K++ +D
Sbjct: 68 LGIDKNDTVAVMMPNTPAMVECAFGVPMSGGVLCTLNTRLDINALTFCLQHSEAKVLILD 127
Query: 119 HLSSSLLLEVVSLFPPHSKT-----PKLVLITDDKEISSSSSPPPRIPPADFVD-TYENM 172
S F H++ P L++I + + F +YE +
Sbjct: 128 -----------SEFAEHAEMIDETFPNLIVI---------HATDAALDIEGFGQMSYEAL 167
Query: 173 LAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSV 232
LA D +W +P + D + LNYT GTT PKGVV ++ + A+ +++DW +PK +
Sbjct: 168 LASSDSLDNWEKPLDEWDAIALNYTSGTTGKPKGVVYHHRGATLNAISNILDWDMPKHPM 227
Query: 233 LLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLS 292
LWTLP+FH NGW F W A NVCLR DA + LI KH V+H C AP+V N+++
Sbjct: 228 YLWTLPLFHCNGWCFPWTIAERAGVNVCLRNIDADLILQLIAKHQVSHYCSAPVVHNMIA 287
Query: 293 SS-PEAKQ-LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKW 350
PE K+ + V+ AG+PP +L E++GF +SH YG TE+ G CA + +W
Sbjct: 288 GGKPEYKEAITHTVKGWVAGAPPSETMLAAMEAMGFHISHVYGLTEVYGPVTVCAEQQEW 347
Query: 351 NKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKD 410
+ L RA K+RQGV + +T D+ T V DG+ GE+ +RG +M GYLK
Sbjct: 348 DTLDVAGRAQKKSRQGVTSHLMTGFDVFKQGTTEPVAADGEEMGELALRGNMVMKGYLKS 407
Query: 411 PEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVN 470
+AT + + DG + TGD+G+ +PDGY++I DR KD+IISGGENISS E+E+VLY +
Sbjct: 408 RKATEEALTDGWFRTGDLGVKYPDGYIKIMDRLKDIIISGGENISSIEVENVLYKMLEIQ 467
Query: 471 EAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKD-IIQYCRARIPRYMVPKTVVFID 529
AVV P W E+P AF+ + G+ T ++D ++++C+ + + VPK +VF
Sbjct: 468 SCAVVAAPHDKWGEVPVAFIEIHEGS------TLQRDHVMEHCKQHLAGFKVPKYIVFA- 520
Query: 530 ELPKTATGKVQKYVLGDIANSMS 552
E+PKT+TGKVQK+ L A S++
Sbjct: 521 EIPKTSTGKVQKFELRQAAKSLA 543
>gi|254451067|ref|ZP_05064504.1| acyl-CoA synthase [Octadecabacter arcticus 238]
gi|198265473|gb|EDY89743.1| acyl-CoA synthase [Octadecabacter arcticus 238]
Length = 477
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/490 (44%), Positives = 313/490 (63%), Gaps = 24/490 (4%)
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
GI G V++IAPNIP E A+PM GA+ N N RLD TI+ IL+H E+K++ VD
Sbjct: 5 GIGKGDTVALIAPNIPEALECALAMPMLGAVLNANNMRLDVGTIAYILEHGEAKVLLVDT 64
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGD 177
S++ E V+ ++ + VL+ D I S P D + T Y+++L++GD
Sbjct: 65 EFSAMAAEAVA------QSGRDVLVVD---IEDSEGPG-----GDRIGTLTYDDLLSEGD 110
Query: 178 PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
P F++ P + D + LNYT GTT PKGVV ++ + AV++++ W +P V LWTL
Sbjct: 111 PDFAYTLPDDEWDALALNYTSGTTGRPKGVVYSHRGAWTNAVNNVVTWAMPHHPVYLWTL 170
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
P+FH NGW F W ++ T+V LR A ++ HGVTH+CGAPI+++++S + E
Sbjct: 171 PLFHCNGWCFPWTITMLAGTHVFLRAPRADVIYDAFADHGVTHLCGAPIIMSMISDAEEK 230
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
+ + ++++TA +PPPA V+ E++G ++H YG TE+ G V CA KP W LPA +
Sbjct: 231 RGFPQKIKMMTAAAPPPASVIKGMEAMGISITHVYGLTEVYGPAVVCAEKPGWAALPAEQ 290
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A +KARQGV +V ++DPETG V +G+T GE+V RG +M GYLK PE T+K
Sbjct: 291 QAEMKARQGVAYELEEDVLVLDPETGTPVPWNGKTLGEVVFRGNIVMKGYLKAPEETAKA 350
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
KDG +++GD+ + H DGY+EI+DRSKD+IISGGENISS E+E LYSHP V+ AVV
Sbjct: 351 FKDGWFWSGDIAVQHADGYIEIRDRSKDIIISGGENISSIEVEKALYSHPAVSVVAVVAM 410
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD W E+PCAFV L SG + TE++++ + +AR+ YM PK V+F ELPKT TG
Sbjct: 411 PDEKWGEVPCAFVEL-----SGEV--TEEELLAHAKARLAGYMRPKKVIF-GELPKTTTG 462
Query: 538 KVQKYVLGDI 547
K++K L D+
Sbjct: 463 KIRKNELRDL 472
>gi|126733247|ref|ZP_01748994.1| AMP-dependent synthetase and ligase [Roseobacter sp. CCS2]
gi|126716113|gb|EBA12977.1| AMP-dependent synthetase and ligase [Roseobacter sp. CCS2]
Length = 541
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/543 (42%), Positives = 314/543 (57%), Gaps = 20/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN PLTPL ++RAA D +++Y T T+++ YRR +LAS+L+ GI P
Sbjct: 10 LGKRAANYVPLTPLSHLQRAALIFADREAVVYGKTRLTYAKYYRRVSRLASALTKAGIKP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+ I PN+PA E F VP GA+ NTINTRLD T++ I H E+K+ VD
Sbjct: 70 GDVVATILPNVPAQSEAAFGVPACGAVLNTINTRLDIDTVAYIFDHGEAKVALVDSQFLP 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L + + L P ++ + DD+ + + YE+ LA GDP+F+W+
Sbjct: 130 LAMAAIELM--EGPAPLIIEVPDDQAGVHAMAEQ---------QNYEDFLATGDPEFAWI 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + + LNYT GTT PKGVV ++ +++ + + I W +P L +P+FH N
Sbjct: 179 LPEDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTPISWELPLFMRYLQIVPLFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW+ TW +G T VC R A V+ I GVTH GAPIVLNL+ ++ + + D
Sbjct: 239 GWNHTWMMPALGGTVVCCRDISAKAVYDAIGDEGVTHFGGAPIVLNLIVNAKDEDRRAFD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V + TAG+PP L LGF V YG TE G C W W+ LP E+A++
Sbjct: 299 HVVEVFTAGAPPAPATLAAIGKLGFNVKQVYGLTETYGHVTECIWDSDWDSLPEDEQAAI 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGV + +V +VD G V RDG T+GEIVMRG ++M GYLK+ EAT K G
Sbjct: 359 KARQGVAFPMMEDVTVVDTYMG-QVPRDGATQGEIVMRGNAVMKGYLKNAEATDKAFAGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++ D+ + H G ++I DR+KD+IISGGENISS E+E L H VN AVV +PD
Sbjct: 418 YFHSEDLAIQHQGGSIQISDRAKDIIISGGENISSVEVEGALMHHAAVNLCAVVAQPDDK 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK G + E +II + R R+ + PK VVF ELPKT+TGK+QK
Sbjct: 478 WGEVPCAFVELKDGATA-----DEAEIIAFTRERLAGFKCPKKVVF-QELPKTSTGKIQK 531
Query: 542 YVL 544
+ L
Sbjct: 532 FEL 534
>gi|400286554|ref|ZP_10788586.1| AMP-dependent synthetase and ligase [Psychrobacter sp. PAMC 21119]
Length = 554
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/557 (40%), Positives = 321/557 (57%), Gaps = 29/557 (5%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIY-----NDTTYTWSQTYRRCLQLASSLSS 58
L PAN PLTP+ FI R+A D +IIY ND + TW QTY RC QL+ L
Sbjct: 8 LGKTPANYQPLTPIDFIIRSAQVYPDKTAIIYDDLEHNDLSQTWQQTYDRCRQLSDGLRK 67
Query: 59 FGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD 118
GI+ V+V+ PN PAM E F VPMS + T+NTRLD ++ L+HSE+K++ +D
Sbjct: 68 LGIDKNDTVAVMMPNTPAMVECAFGVPMSSGVLCTLNTRLDINALTFCLQHSEAKVLILD 127
Query: 119 HLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP 178
+ + FP L++I + ++ R +YE ++A D
Sbjct: 128 SEFADYAEIIDETFP------NLIVI----HATDNAIDVERFGKM----SYEALIASSDS 173
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
+W +P + D + LNYT GTT PKGVV ++ + AV +++DW +PK + LWTLP
Sbjct: 174 LDNWEKPADEWDAIALNYTSGTTGKPKGVVYHHRGATLNAVSNILDWDMPKHPMYLWTLP 233
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSS-SPEA 297
+FH NGW F W A NVCLR DA + LI KH V+H C AP+V N+++ PE
Sbjct: 234 LFHCNGWCFPWTIAERAGVNVCLRNIDADLILQLIAKHQVSHYCSAPVVHNMIAGGKPEY 293
Query: 298 KQ-LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
K+ + V+ AG+PP +L E++GF +SH YG TE+ G CA + +W+ L
Sbjct: 294 KEAITHTVKGWVAGAPPSETMLAAMEAMGFHISHVYGLTEVYGPVTVCAEQEEWDSLDVA 353
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
RA K+RQGV + +T D+ T V DG+ GE+ +RG +M GYLK +AT +
Sbjct: 354 GRAQKKSRQGVTSHLMTGFDVFKQGTTEPVAADGEEMGELALRGNMVMKGYLKSRKATEE 413
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
D + TGD+G+ +PDGY++I DR KD+IISGGENISS E+E+VLY P + AVV
Sbjct: 414 AFADSWFRTGDLGVKYPDGYIKIMDRLKDIIISGGENISSIEVENVLYKMPEIQSCAVVA 473
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKD-IIQYCRARIPRYMVPKTVVFIDELPKTA 535
P W E+P AF+ + G+ T ++D + ++C+ + R+ VPK +VF E+PKT+
Sbjct: 474 APHDKWGEVPVAFIEIHEGS------TLQRDTVTEHCKQHLARFKVPKYIVFA-EIPKTS 526
Query: 536 TGKVQKYVLGDIANSMS 552
TGKVQK+ L A S++
Sbjct: 527 TGKVQKFELRQAAKSLA 543
>gi|110681107|ref|YP_684114.1| AMP-binding protein [Roseobacter denitrificans OCh 114]
gi|109457223|gb|ABG33428.1| AMP-binding domain protein [Roseobacter denitrificans OCh 114]
Length = 540
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/551 (39%), Positives = 322/551 (58%), Gaps = 39/551 (7%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTPL ++RAA + +I+Y D ++ + R +LAS+L++ G+ PG VV+
Sbjct: 15 ANHVPLTPLSHLKRAAVVFANHTAIVYGDVRRSYGEHAARATRLASALAAKGVAPGDVVA 74
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PN+PA E HF VP GA+ NTINTRLD T++ IL+H E+++V VD S L++
Sbjct: 75 TLLPNVPAQVEAHFGVPACGAVLNTINTRLDVDTVAYILEHGEARMVLVD----SQFLDL 130
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFV---------DTYENMLAKGDPQ 179
+ ++ +SPP I D V TYE+++A G
Sbjct: 131 A-----------------EAACATLASPPTLIEVPDAVAGIEASGRHQTYEDLIAAGTTD 173
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W+ P+ + + + LNYT GTT PKGVV ++ +++ + ++I W + + +P+
Sbjct: 174 FDWIMPQDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVISWRMTLHPTFMQIVPL 233
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EA 297
FH NGW+ W ++G T VC R AP +F I VTH GAPIVLN+L ++P E
Sbjct: 234 FHCNGWNHAWMMPLIGGTLVCCRDITAPAIFNAIADEKVTHFGGAPIVLNMLVNAPSEER 293
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
+ ++ PV I TAG+PP L + E+LGF V+ YG TE G C W+ +W+ A
Sbjct: 294 RTIEHPVEIFTAGAPPAPATLAKVEALGFNVTQVYGLTETYGHVTECLWRSEWDGHEAEA 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+A++K+RQGV + ++ ++D + V D T+GEI++RG S+M GY K+P+ATS+
Sbjct: 354 KAAIKSRQGVPFPMMEDIVVMDADM-TPVPTDASTQGEIMIRGNSVMKGYYKNPQATSEA 412
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G +++GD+ + H D Y++I DR+KD+IISGGENISS E+E VL +H V AAVV +
Sbjct: 413 FAGGYFHSGDIAVQHDDSYIQIADRAKDIIISGGENISSVEVEGVLMAHDDVMLAAVVAK 472
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD W E+PCAFV LK E +I + R + + PK VVF ELPKT+TG
Sbjct: 473 PDDKWGEVPCAFVELKPEA-----TVDEAGLIAFSRETLAGFKAPKKVVF-QELPKTSTG 526
Query: 538 KVQKYVLGDIA 548
K+QK+ L +A
Sbjct: 527 KIQKFELRKLA 537
>gi|84499518|ref|ZP_00997806.1| AMP-binding protein [Oceanicola batsensis HTCC2597]
gi|84392662|gb|EAQ04873.1| AMP-binding protein [Oceanicola batsensis HTCC2597]
Length = 542
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/544 (41%), Positives = 312/544 (57%), Gaps = 21/544 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN PLTPL + RAA +++Y T+++ + R +LAS+L+ G+ P
Sbjct: 10 LEKCAANYVPLTPLSNLRRAARIWPGREALVYGSFRKTYAEYHERVTRLASALAGLGVTP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+ I PN+P E HF VP GA+ N INTRLDA T++ IL H +K+V D S
Sbjct: 70 GDVVATILPNLPPHAEAHFGVPACGAVLNAINTRLDAGTVAYILDHGGAKVVLCDSQFVS 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+L E + P+++ DD+ S S D++ TYE++LA+GDP F W+
Sbjct: 130 VLAEAMERM--EGPRPRVIECPDDQAGVHSRS--------DYM-TYEDLLARGDPAFDWI 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + + LNYT GTT PKGVV ++ A+ ++ W + L +P+FH N
Sbjct: 179 MPEDEWESIALNYTSGTTGRPKGVVYHHRGAHQNAMGQILSWRMQLYPRYLTIVPLFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW TW ++G T VC R AP +FA GVTH GAPIVLN+L ++PE ++ +
Sbjct: 239 GWCHTWMIPLLGGTVVCCRDITAPALFAAFADEGVTHFGGAPIVLNMLVNAPEDQRRPFE 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPK-WNKLPARERAS 360
+ V + TAG+PP L + E +GF V+ YG TE G W W L RA+
Sbjct: 299 QTVEVFTAGAPPAPATLAQIEPMGFNVTQVYGLTETYGPATESTWDDDLWGDLTGDARAA 358
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
KARQGV + + + + D + GEI+MRG +M GYLK+PEAT + K
Sbjct: 359 KKARQGVAMPAYEHITAMTSDM-EQIPMDAEATGEIMMRGNGVMKGYLKNPEATKEAFKG 417
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+ + H DGYL+I DR+KD+IISGGENISS E+E VL HP V AVV +PD
Sbjct: 418 GYFHTGDIALQHSDGYLQIADRAKDIIISGGENISSVEVEGVLMGHPDVLLCAVVAKPDE 477
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV LK G + E +I Y R R+ + PK VVF ELPKT+TGK+Q
Sbjct: 478 KWGEVPCAFVELKDGREG-----DEAALIAYARERLAGFKTPKKVVF-RELPKTSTGKIQ 531
Query: 541 KYVL 544
K+ L
Sbjct: 532 KFEL 535
>gi|403718972|ref|ZP_10943571.1| putative fatty-acid--CoA ligase [Kineosphaera limosa NBRC 100340]
gi|403208205|dbj|GAB98254.1| putative fatty-acid--CoA ligase [Kineosphaera limosa NBRC 100340]
Length = 548
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/544 (40%), Positives = 322/544 (59%), Gaps = 19/544 (3%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
N PL+PL F+ R+A D +++Y DT++T+ + +A +L++ G+ PG V+
Sbjct: 5 NHTPLSPLSFLARSAAVWPDKQAVVYGDTSWTYREFADEVQVMARALAASGVEPGDRVAY 64
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+ PN+P M H+AVP GA+ +NTRL A I+ +L+HS++K+V VD LLEVV
Sbjct: 65 VLPNVPQMLAAHYAVPALGAVLVAVNTRLSAEEIAYLLEHSQAKVVVVD----GGLLEVV 120
Query: 130 S-LFPPHSKTPKL--VLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK 186
+ + P + +++ DD+ + S R D + + + + D S V P+
Sbjct: 121 ARAVSTGDRAPSVTDIVLIDDEAAGAVGSTADRELAGDRLISLADFRDRADR--SAVEPQ 178
Query: 187 SDLDP----MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
D + LNYT GTT PKGV+ ++ ++ + ++ + + LWTLPMFH
Sbjct: 179 WGTDDEERHLCLNYTSGTTGRPKGVLYTHRGAYLNSFGEIVHSGFTRDTRYLWTLPMFHC 238
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
NGW TW +G T+VCLR+ V+ L+ +TH+ GAP VL ++++PE +L+R
Sbjct: 239 NGWCTTWAITAIGGTHVCLREVRGDVVWRLLHDEQITHLNGAPTVLTTIANAPERTELER 298
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
PV I TAG+PP +L E LGF + H YG TE+ G C + W L +ERA ++
Sbjct: 299 PVTITTAGAPPAPATILGMEDLGFRIVHVYGLTEVYGPYSVCEPQDSWADLEPQERARIQ 358
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
ARQGV + + +VDPE V DG+T GEI MRG +LM GY +D E T+ G
Sbjct: 359 ARQGVGMVQADRMRVVDPEMN-DVPADGETMGEIAMRGNNLMAGYYRDAEGTAAAFSGGW 417
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
++TGD+G+MHPDGY+E++DR+KDV+ISGGE+IS+ E+E L SHP V E AV+G PD W
Sbjct: 418 FHTGDLGVMHPDGYVELRDRAKDVVISGGESISTVEVEQALMSHPDVLEVAVIGVPDEKW 477
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E P FV LK G T +++I++ +++I RY PK V F+ ELPKT+TGK+QK+
Sbjct: 478 GERPKGFVKLKEGA-----AVTPEELIEHVKSKIARYKAPKAVDFVVELPKTSTGKIQKF 532
Query: 543 VLGD 546
L D
Sbjct: 533 ALRD 536
>gi|399994952|ref|YP_006575184.1| ATP-dependent AMP binding enzyme [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
gi|398659500|gb|AFO93465.1| ATP-dependent AMP binding enzyme [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
Length = 543
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/550 (42%), Positives = 335/550 (60%), Gaps = 26/550 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+P+ F+ RA T D P++IY D TW + R +A+ L S GI G VS
Sbjct: 13 ANYVPLSPVSFLNRAETLHSDRPAVIYGDLRRTWGEVATRIRGVAAGLVSLGIGRGDTVS 72
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
V+ PNIP ++EL FA+P++GA+ NT+NTRL+ TI+ IL H+++K V VD L+ +
Sbjct: 73 VLCPNIPELFELQFALPLTGAVINTLNTRLEPETIAYILDHADTKAVIVDRE----LIPL 128
Query: 129 VSL-FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKS 187
+S+ F ++ ++ I DD+ +++ P YE +L G P+
Sbjct: 129 LSMAFAAMGRSVSVIEI-DDRNVAA--------PHTLVGKPYEELLTDGAGGAPLDLPQD 179
Query: 188 DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSF 247
+ D + LNYT GT+ PKGVV ++ +++A+ + W P + L +PMFH NGW
Sbjct: 180 EWDAIALNYTSGTSGRPKGVVYHHRGAYLMALGTAAAWQTPHYPIYLSVVPMFHCNGWGH 239
Query: 248 TWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-----LDR 302
+W A++G T V R + IR HGVTH APIVL +L+ + EA+ D
Sbjct: 240 SWVMAMLGGTMVFTRTPSPDLILDAIRSHGVTHFGAAPIVLQMLAEA-EAETGSTTPFDP 298
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
+++LTAG+PPP VL +T+++G V YG TE G C W+ W E+A L+
Sbjct: 299 AIKVLTAGAPPPPSVLQKTKAMGLDVMQVYGLTETYGHISKCLWQDSWADKIEAEQAQLQ 358
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
A+QG+ + V ++D +TG+ V RDGQT+GEI +RG ++M GY KD +AT K ++G
Sbjct: 359 AQQGIAMPMVEAVSVIDTDTGIPVARDGQTQGEIAVRGNTVMKGYYKDADATDKAFENGW 418
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
+++GD ++H DGY++I+DR KDVIISGGENISS E+E+VLY HP V AAVV +PDP W
Sbjct: 419 FWSGDGAVVHADGYMQIRDRLKDVIISGGENISSVEVEAVLYRHPAVQAAAVVAKPDPKW 478
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E+PCAF+ L+TG+D T ++II +CR + + PKTVVF LPKT+TGK+QK+
Sbjct: 479 GEVPCAFIELRTGSD-----LTSEEIIAFCRTHLAGFKAPKTVVFT-SLPKTSTGKIQKF 532
Query: 543 VLGDIANSMS 552
L D A +MS
Sbjct: 533 QLRDAAKTMS 542
>gi|332526793|ref|ZP_08402895.1| putative CoA ligase [Rubrivivax benzoatilyticus JA2]
gi|332111196|gb|EGJ11228.1| putative CoA ligase [Rubrivivax benzoatilyticus JA2]
Length = 548
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/554 (39%), Positives = 316/554 (57%), Gaps = 21/554 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN L+P F+ER+A D P++I+ YTW+Q R +LA++L S G+
Sbjct: 8 LDRNAANHVALSPTSFVERSAEVFGDLPAVIHGARRYTWAQVRERSARLAAALRSLGVGR 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VSV+ PN P M E H+AVP A+ NT+NTRLDA ++ + H E+ ++ D
Sbjct: 68 GTTVSVMLPNTPEMVEAHYAVPAVNAVLNTLNTRLDAPLLAWQMNHCETAVLITDREFGP 127
Query: 124 LLLEVVS-LFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQF 180
L+ + ++ L H + P ++ + D + D V T YE +LA P
Sbjct: 128 LMADALARLKAEHGREPVVIDVCDSEYTGRG----------DRVGTLEYEELLAAHAPLA 177
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
P + D + ++YT GTT PKGVV ++ ++ AV + W +P LWTLPMF
Sbjct: 178 RLEGPADEWDAIAVSYTSGTTGDPKGVVTHHRGAYLNAVGNAATWTMPHFPTYLWTLPMF 237
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AK 298
H NGW F W A++G T+VCLR+ + + +R+HGV H C APIV L+ ++P +
Sbjct: 238 HCNGWCFPWTVAMLGGTHVCLRRVEPKAILDAMREHGVDHYCAAPIVHGLIINAPADWRE 297
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
+ + VR + AG+ PPA ++ +GF ++H YG TE+ G + W++ E+
Sbjct: 298 GITQQVRGMVAGAAPPAAMIEGMAKIGFDITHVYGLTEVYGPAAVAVKRAAWSEADLSEQ 357
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
L RQGVR + ++DPET V DGQT GEI+ RG +M GYLK+P AT K
Sbjct: 358 TRLNGRQGVRYALQEGMTVLDPETMAEVPADGQTMGEIMFRGNIVMKGYLKNPSATDKAF 417
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
G ++TGD+ ++ PD Y++I+DRSKD+IISGGENISS E+E LY HP V AVV +P
Sbjct: 418 AGGWFHTGDLAVIEPDRYVKIRDRSKDIIISGGENISSLEVEDALYRHPAVLACAVVAKP 477
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
DP W E P A+V LK G D T ++I +C+ + Y VPK + F + +PKT+TGK
Sbjct: 478 DPKWGETPVAYVELKLGVD-----VTADELIAHCKRVLAGYKVPKEIRF-ETIPKTSTGK 531
Query: 539 VQKYVLGDIANSMS 552
+QK+ L A S S
Sbjct: 532 IQKFQLRQRARSSS 545
>gi|171058759|ref|YP_001791108.1| AMP-dependent synthetase and ligase [Leptothrix cholodnii SP-6]
gi|170776204|gb|ACB34343.1| AMP-dependent synthetase and ligase [Leptothrix cholodnii SP-6]
Length = 556
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/551 (40%), Positives = 316/551 (57%), Gaps = 22/551 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN L+P+ F+ER+A ++I+ Y+W+Q R +LAS+L S G+ GH VS
Sbjct: 14 ANYTALSPVSFVERSAEVFGARTAVIHGRRRYSWAQVRERSARLASALRSLGVERGHTVS 73
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
V+ PN P M E H+AVP GA+ NT+NTRLDA ++ + H E+ ++ D + L+ +
Sbjct: 74 VMLPNTPEMVEAHYAVPALGAVLNTLNTRLDAALLAWQMNHCEATVLITDSEFAPLMDKA 133
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
++L V+ D E + + YE++LA P P +
Sbjct: 134 LALLKSQHGRELRVIDVCDSEFTG-------VHEHLGTHEYEDLLAAHVPLHRLEGPADE 186
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + ++YT GTT PKGVV ++ ++ AV + + W +P V LWTLPMFH NGW F
Sbjct: 187 WDAIAVSYTSGTTGDPKGVVTHHRGAYLNAVCNSVTWTMPHFPVYLWTLPMFHCNGWCFP 246
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP----EAKQLD--- 301
W A +G T+VCLRK DA + +R+H V H C APIV +LL ++P E D
Sbjct: 247 WTIAALGGTHVCLRKVDARAILDAMREHAVDHYCAAPIVHSLLINAPAELREGLGTDPTG 306
Query: 302 --RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
R +R L AG+ PPA ++ + +GF ++H YG TE+ G P+W E+A
Sbjct: 307 SSRKIRGLVAGAAPPAAMIEGMQRIGFDITHVYGLTEVYGPASVAVKTPEWADADLGEQA 366
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L RQGVR + + ++DPET DGQT GEI+ RG +M GYLK+P+AT ++
Sbjct: 367 RLNGRQGVRYVLQEGMTVMDPETMTETPADGQTMGEIMFRGNIVMKGYLKNPKATQASLE 426
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+ +M PD Y++I+DRSKDVIISGGENISS E+E LY HP V AVV +PD
Sbjct: 427 GGWFHTGDLAVMEPDRYVKIRDRSKDVIISGGENISSIEVEDALYRHPAVTACAVVAKPD 486
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
P W E P A+V L G T ++I +C+A + Y VP+ + F + +PKT+TGK+
Sbjct: 487 PKWGETPLAYVELAYGAQ-----VTAPELIAHCKALLAGYKVPREIRF-EPIPKTSTGKI 540
Query: 540 QKYVLGDIANS 550
QK+ L + A S
Sbjct: 541 QKFQLRERARS 551
>gi|389581533|ref|ZP_10171560.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Desulfobacter
postgatei 2ac9]
gi|389403168|gb|EIM65390.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Desulfobacter
postgatei 2ac9]
Length = 536
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/533 (40%), Positives = 317/533 (59%), Gaps = 22/533 (4%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
L+P F++R+ D ++IY D ++TW+ R +LA+ L + G+ PG V+ I PN
Sbjct: 11 LSPTNFLDRSVKVYPDKTAVIYGDKSFTWTGFQERVFRLANGLKALGVGPGDKVAFICPN 70
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
P M E H++VP+ GA +IN RL A +S I+ HS++K+V D+ ++L VV P
Sbjct: 71 TPPMLEAHYSVPLLGAALVSINIRLSANEMSYIINHSDAKVVVADNEFGNMLSSVV---P 127
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMV 193
+ + I D + P YE LA + + + + +
Sbjct: 128 ELTAVKAFINICDIDDSMPLDGP-----------EYERFLADSPTDPVALVIEDEREVLA 176
Query: 194 LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAV 253
LNYT GTT PKGV+ ++ ++ A+ L+++ + S LWTLPMFH NGW FTWG
Sbjct: 177 LNYTSGTTGRPKGVMYHHRGAYLNALGELLEFKINPDSKYLWTLPMFHCNGWCFTWGITA 236
Query: 254 VGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLS--SSPEAKQLDRPVRILTAGS 311
+GAT+VCLRK D ++ +I + GVTH+C AP +L +S + +L + I+TAG+
Sbjct: 237 MGATHVCLRKVDPVEIYRIIAEVGVTHLCAAPTILIGMSVFAKENNVRLSNSLEIMTAGA 296
Query: 312 PPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIG 371
PP V+ E++G ++ YG TE+ G + C W+ KW+ L RA +KARQGV I
Sbjct: 297 PPAPMVIQNMENIGANITQTYGLTEVFGPHSVCQWQDKWDDLSPMARAGIKARQGVAYIV 356
Query: 372 LTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMM 431
+D+VDPET V RDG T GEIVMRG ++MLGY KD EA+++ + G +++GD+ +M
Sbjct: 357 AEHMDVVDPETMEPVPRDGTTMGEIVMRGNNVMLGYYKDAEASTEAFRGGWFHSGDLAVM 416
Query: 432 HPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVS 491
HPD Y++I DR KD+IISGGENIS+ EIE+VLY+HP V E AV+ PD W E+P AF+
Sbjct: 417 HPDNYVQIMDRKKDIIISGGENISTVEIENVLYTHPDVMEVAVISVPDEKWGEVPKAFIV 476
Query: 492 LKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
+ GT+ II YC+ ++ R+ PK++ F LPKTATGK+QK+ L
Sbjct: 477 PRAGTNP-----DPAQIIAYCKEKMARFKAPKSIEF-GPLPKTATGKLQKFKL 523
>gi|383757452|ref|YP_005436437.1| AMP-dependent synthetase and ligase [Rubrivivax gelatinosus IL144]
gi|381378121|dbj|BAL94938.1| AMP-dependent synthetase and ligase [Rubrivivax gelatinosus IL144]
Length = 548
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/556 (40%), Positives = 319/556 (57%), Gaps = 21/556 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+L N AN L+P F+ER+A D P++I+ YTW+Q R +LA++L S G+
Sbjct: 6 QQLDRNAANFVALSPTSFVERSAEVFGDLPAVIHGARRYTWAQVRERSARLAAALRSLGV 65
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
G VSV+ PN P M E+H+AVP A+ NT+NTRLDA ++ + H E+ ++ D
Sbjct: 66 GRGTTVSVMLPNTPEMVEVHYAVPAVNAVLNTLNTRLDAPLLAWQMNHCETAVLITDREF 125
Query: 122 SSLLLEVVS-LFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDP 178
L+ + ++ L H + P ++ + D + D V T YE +LA P
Sbjct: 126 GPLMADALARLKAEHGREPVVIDVCDSEYTGRG----------DRVGTLEYEALLAAHAP 175
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
P + D + ++YT GTT PKGVV ++ ++ AV + W +P LWTLP
Sbjct: 176 LARLEGPADEWDAIAVSYTSGTTGDPKGVVTHHRGAYLNAVGNAATWTMPHFPKYLWTLP 235
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA- 297
MFH NGW F W A++G T+VCLR+ + + +R+HGV H C APIV L+ ++P
Sbjct: 236 MFHCNGWCFPWTIAMLGGTHVCLRRVEPRAILDAMREHGVDHYCAAPIVHGLIINAPAEW 295
Query: 298 -KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
+ + + VR + AG+ PPA ++ LGF ++H YG TE+ G +P W+
Sbjct: 296 REGITQQVRGMVAGAAPPAAMIEGMARLGFDITHVYGLTEVYGPAAVAVKRPAWSDADLS 355
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
E+ L RQGVR + ++DPET V DGQT GEI+ RG +M GYLK+P AT K
Sbjct: 356 EQTRLNGRQGVRYALQEGMTVLDPETMAEVPADGQTMGEIMFRGNIVMKGYLKNPSATDK 415
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
G ++TGD+ ++ PD Y++I+DRSKD+IISGGENISS E+E LY HP V AVV
Sbjct: 416 AFAGGWFHTGDLAVIEPDRYVKIRDRSKDIIISGGENISSLEVEDALYRHPAVLACAVVA 475
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
RPDP W E P A+V LK G D T ++I +C++ + Y VPK + F + +PKT+T
Sbjct: 476 RPDPKWGETPVAYVELKLGVD-----VTAAELIAHCKSVLAHYKVPKEIRF-EAIPKTST 529
Query: 537 GKVQKYVLGDIANSMS 552
GK+QK+ L A S S
Sbjct: 530 GKIQKFQLRQRAKSSS 545
>gi|357039971|ref|ZP_09101762.1| o-succinylbenzoate--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
gi|355357334|gb|EHG05110.1| o-succinylbenzoate--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
Length = 531
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/537 (40%), Positives = 324/537 (60%), Gaps = 25/537 (4%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
N PL+PL F+ER+A D +IIYND ++T+++ R + A++L GI G V+
Sbjct: 5 NYEPLSPLAFLERSAFVYPDKKAIIYNDQSFTYAEFKDRVQRFATALKQQGIEKGDKVAF 64
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+ PN+P + E H+AVP+ G + +IN RL + ++ IL+HS SK++FVD + ++ ++
Sbjct: 65 LCPNLPPLLEAHYAVPLVGGVLVSINIRLAPQEVAYILQHSGSKMLFVDTEFAGVIKPIM 124
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDL 189
S K+V I D + S P YE ++ +F++ +L
Sbjct: 125 S----EIGDVKIVNICD---VESKVFDGP---------DYEEFISVDPDEFTF-GVDDEL 167
Query: 190 DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249
+ LNYT GTT PKGV+ ++ ++ A+ L+++ ++ LWTLPMFH NGW FTW
Sbjct: 168 QHITLNYTSGTTGKPKGVLYTHRGAYLNALGELLEFQCNPSTIYLWTLPMFHCNGWCFTW 227
Query: 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK--QLDRPVRIL 307
+G T+VCLRK ++ I+KH V+H+ APIVL +++ Q+ + + I+
Sbjct: 228 AITAIGGTHVCLRKVVPDEIYKQIQKHEVSHLSAAPIVLIGMANYKGIGDVQMKKHLNIM 287
Query: 308 TAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
TAG+PP V+ ES+G V YG TE+ G + C W+P+WN L +RA +KARQGV
Sbjct: 288 TAGAPPSPTVIKNMESVGCTVIQTYGLTEVYGPHSVCEWQPQWNDLAIEDRAKIKARQGV 347
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGD 427
+ T +D+V+P + + DG+T GEIVMRG ++M GY PE T + + G +++GD
Sbjct: 348 PYVTATYMDVVNPASMEPMPHDGETIGEIVMRGNNVMAGYYNQPEDTEQAFRGGWFHSGD 407
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+ + HP+GY+EIKDR KDV ISGGENIS+ E+E+V+Y HP V E AVV P W E+P
Sbjct: 408 LAVTHPNGYIEIKDRMKDVTISGGENISTVEVENVIYQHPDVLEVAVVAMPHEKWGEVPK 467
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
AFV+LK GT T +DII++C+ RI R+ PK + F ELPKT+TGK+ KY L
Sbjct: 468 AFVTLKEGTSP-----TAEDIIKFCQERIARFKAPKEIEF-GELPKTSTGKIMKYKL 518
>gi|332560070|ref|ZP_08414392.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides WS8N]
gi|332277782|gb|EGJ23097.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides WS8N]
Length = 549
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 234/548 (42%), Positives = 325/548 (59%), Gaps = 20/548 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN LTPL ++RAA D +++ T+ + + R +LAS+L+ GI P
Sbjct: 10 LEKCAANYAALTPLSHLKRAAEVHTDRTALVNGSIRLTYGEYHARVSRLASALAGMGIQP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+ + PNI A E HF VP GAI N INTRLD T+S IL+H +KL+ D ++
Sbjct: 70 GDVVATLLPNIAAHAEAHFGVPACGAILNAINTRLDLDTVSYILEHGGAKLLLCD--TAF 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L L + K P LV + D +E S P+ V YE ++A+G+P WV
Sbjct: 128 LKLAKDACARLEGKAPILVEVCD-REAGFS--------PSGEVLEYEELMARGNPWAPWV 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + + LNYT GTT PKGVV ++ ++ + I W + V L +P+FH N
Sbjct: 179 MPEDEWESIALNYTSGTTGRPKGVVYHHRGAYLSTYGNAIAWRMQLYPVYLTIVPLFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAKQ-LD 301
GW TW ++G T VC R A ++A I GVTH GAPIVLN L++++PE ++ D
Sbjct: 239 GWCHTWMVPMLGGTVVCCRDITAKAIYAAIADEGVTHFGGAPIVLNTLINAAPEDRRSFD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+ V + TAG+PPPA L E LGF V+ YG TE+ G C WKP+W++ ERA+L
Sbjct: 299 QVVEVFTAGAPPPAATLAAIEPLGFNVTQVYGLTEVYGPATECIWKPEWDETAGEERAAL 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KAR GV L ++ D G + RD GEI MRG +M GY K+PEAT++ +DG
Sbjct: 359 KARTGVAMATLEGAEVHDTH-GQPIPRDTVHLGEIAMRGNMVMKGYYKNPEATAEAFRDG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GD+ HPDGY++I DR+KD+IISGGEN+SS E+E V+ HP V+ AVV +PD
Sbjct: 418 WFRSGDIAFQHPDGYIKITDRAKDIIISGGENVSSVEVEGVIAHHPAVSLCAVVAKPDER 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK G + TE++II + R R+ + PK V+F ELPKT+TGK+QK
Sbjct: 478 WGEVPCAFVELKRGRQA-----TEEEIIAFARERLAGFKTPKQVIFC-ELPKTSTGKIQK 531
Query: 542 YVLGDIAN 549
+ L +A
Sbjct: 532 FELRAVAK 539
>gi|126640660|ref|YP_001083644.1| acyl-CoA synthetase [Acinetobacter baumannii ATCC 17978]
Length = 462
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/478 (44%), Positives = 301/478 (62%), Gaps = 22/478 (4%)
Query: 77 MYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHS 136
M E HFAVPM+GA+ NT+NTRLDA+TI+ +L+H+E+K++ VD +L E +SL P
Sbjct: 1 MIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAETKVLLVDPEFVNLAREALSLIPNQH 60
Query: 137 KTPKLVLITDDKEISSSSSPPPRIPPADFVDT--YENMLAKGDPQFSWVRPKSDLDPMVL 194
+V+ D+E + F+ + YE +A+GD F W P+ + D + L
Sbjct: 61 I---IVIDVADEEYEGENQ---------FLGSFEYEEWIAQGDANFEWHLPQDEWDAISL 108
Query: 195 NYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVV 254
NYT GTT PKGVV ++ ++ A +++ + ++V LWTLP+FH NGW F W A
Sbjct: 109 NYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPLFHCNGWCFAWSIAAS 168
Query: 255 GATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDRPVRILTAGSP 312
G TN+CLRK D V LI KH V + CGAPIVL+++ + P+ KQ ++ V ++ AG+
Sbjct: 169 GGTNICLRKVDPELVMQLIAKHKVDYFCGAPIVLSMIINLPKEKQPIIEHHVEVMVAGAA 228
Query: 313 PPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGL 372
PP V+ ++G V+H YG TE G + CA + W+ L E+A L +RQGV
Sbjct: 229 PPVAVIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSITEQAQLHSRQGVPYPLQ 288
Query: 373 TEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMH 432
+ ++DPET V DG+T GEI+ RG +M GYLK+P+AT + G ++TGD+ + H
Sbjct: 289 DSMRVLDPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPKATEEAFAGGWFHTGDLAVCH 348
Query: 433 PDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSL 492
PDGY +I DRSKD+IISGGENISS E+E VLY HP V AAVV +PD WQE+PCAF+ L
Sbjct: 349 PDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAKPDERWQEVPCAFIEL 408
Query: 493 KTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANS 550
KTG T ++II++C+ + R+ VPK VV I E+PKT+TGK+QK++L + A
Sbjct: 409 KTGAS-----VTPEEIIEHCQKELARFKVPKDVV-ITEIPKTSTGKLQKFILREWAKE 460
>gi|146276338|ref|YP_001166497.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides ATCC
17025]
gi|145554579|gb|ABP69192.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides ATCC
17025]
Length = 548
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/548 (42%), Positives = 320/548 (58%), Gaps = 20/548 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN PLTPL + RAA + ++++ T+ + + R +LAS+L+ GI P
Sbjct: 10 LEKCAANHAPLTPLSHLRRAADVHAERTALVHGSIRLTYGEYHARVSRLASALAGMGIQP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+ I PNI A E HF VP GAI N INTRLD T+S IL+H +KLV D
Sbjct: 70 GDVVATILPNIAAHAEAHFGVPACGAILNAINTRLDLDTVSYILEHGGAKLVLCDTAFLK 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L E + ++ P +V + D + + P DF++ YE ++A+G+P WV
Sbjct: 130 LASEAAARLG--ARAPVIVEVCDRESGFT--------PSGDFLE-YEELMARGNPWAEWV 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + + LNYT GTT PKGVV ++ ++ + I W + V L +P+FH N
Sbjct: 179 MPEDEWESLALNYTSGTTGRPKGVVYHHRGAYLATCGNAIAWRMQLFPVYLTIVPLFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPE-AKQLD 301
GW TW ++G T VC R A ++A I VTH GAPIVLN L++++PE + D
Sbjct: 239 GWCHTWMVPMLGGTVVCCRDITAKAIYAAIADERVTHFGGAPIVLNTLINAAPEDRRHFD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V + TAG+PPPA L E LGF V+ YG TE+ G C WKP+W ERA+L
Sbjct: 299 HVVEVFTAGAPPPAATLAAIEPLGFNVTQVYGLTEVYGPATECIWKPEWEGTTGDERAAL 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KAR GV L ++ D G + RD GEI MRG +M GY K+PEAT++ +DG
Sbjct: 359 KARTGVAMATLEGAEVHDTH-GQPIPRDTVHLGEIAMRGNMVMKGYYKNPEATAEAFRDG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GD+ H DGY++I DR+KD+IISGGEN+SS E+E V+ HP V+ AVV +PD
Sbjct: 418 WFRSGDIAFQHEDGYIKITDRAKDIIISGGENVSSVEVEGVIAHHPAVSLCAVVAKPDER 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK G ++ TE +II + R R+ + PK V+F ELPKT+TGK+QK
Sbjct: 478 WGEVPCAFVELKRGREA-----TEDEIIAFARERLAGFKTPKQVIFC-ELPKTSTGKIQK 531
Query: 542 YVLGDIAN 549
+ L +A
Sbjct: 532 FELRAVAK 539
>gi|126461031|ref|YP_001042145.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides ATCC
17029]
gi|221641100|ref|YP_002527362.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides KD131]
gi|429208505|ref|ZP_19199756.1| AMP-dependent synthetase and ligase [Rhodobacter sp. AKP1]
gi|126102695|gb|ABN75373.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides ATCC
17029]
gi|221161881|gb|ACM02861.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides KD131]
gi|428188494|gb|EKX57055.1| AMP-dependent synthetase and ligase [Rhodobacter sp. AKP1]
Length = 549
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 233/548 (42%), Positives = 325/548 (59%), Gaps = 20/548 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN LTPL ++RAA D +++ T+ + + R +LAS+L+ GI P
Sbjct: 10 LEKCAANYAALTPLSHLKRAAEVHTDRTALVNGSIRLTYGEYHARVSRLASALAGMGIQP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+ + PNI A E HF VP GAI N INTRLD T+S IL+H +KL+ D ++
Sbjct: 70 GDVVATLLPNIAAHAEAHFGVPACGAILNAINTRLDLDTVSYILEHGGAKLLLCD--TAF 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L L + K P LV + D +E S P+ V YE+++ +G+P WV
Sbjct: 128 LKLAKDACARLEGKAPILVEVCD-REAGFS--------PSGEVLEYEDLMDRGNPWAPWV 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + + LNYT GTT PKGVV ++ ++ + I W + V L +P+FH N
Sbjct: 179 MPEDEWESIALNYTSGTTGRPKGVVYHHRGAYLSTYGNAIAWRMQLYPVYLTIVPLFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAKQ-LD 301
GW TW ++G T VC R A ++A I GVTH GAPIVLN L++++PE ++ D
Sbjct: 239 GWCHTWMVPMLGGTVVCCRDITAKAIYAAIADEGVTHFGGAPIVLNTLINAAPEDRRSFD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+ V + TAG+PPPA L E LGF V+ YG TE+ G C WKP+W++ ERA+L
Sbjct: 299 QVVEVFTAGAPPPAATLAAIEPLGFNVTQVYGLTEVYGPATECIWKPEWDETAGEERAAL 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KAR GV L ++ D G + RD GEI MRG +M GY K+PEAT++ +DG
Sbjct: 359 KARTGVAMATLEGAEVHDTH-GQPIPRDTVHLGEIAMRGNMVMKGYYKNPEATAEAFRDG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GD+ HPDGY++I DR+KD+IISGGEN+SS E+E V+ HP V+ AVV +PD
Sbjct: 418 WFRSGDIAFQHPDGYIKITDRAKDIIISGGENVSSVEVEGVIAHHPAVSLCAVVAKPDER 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK G + TE++II + R R+ + PK V+F ELPKT+TGK+QK
Sbjct: 478 WGEVPCAFVELKRGRQA-----TEEEIIAFARERLAGFKTPKQVIFC-ELPKTSTGKIQK 531
Query: 542 YVLGDIAN 549
+ L +A
Sbjct: 532 FELRAVAK 539
>gi|15221339|ref|NP_176994.1| AMP-dependent synthetase and ligase-like protein [Arabidopsis
thaliana]
gi|75308920|sp|Q9C9G2.1|AEE22_ARATH RecName: Full=Probable acyl-activating enzyme 22
gi|12325315|gb|AAG52596.1|AC016447_5 putative amp-binding protein; 53611-55674 [Arabidopsis thaliana]
gi|332196654|gb|AEE34775.1| AMP-dependent synthetase and ligase-like protein [Arabidopsis
thaliana]
Length = 535
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/550 (40%), Positives = 321/550 (58%), Gaps = 44/550 (8%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MD ++ AN+ PLTP+ F++RA+ + SIIY T +TW QTY RC +LA+SL S
Sbjct: 1 MDNMELCEANNVPLTPITFLKRASECYPNRTSIIYGQTRFTWPQTYDRCCRLAASLISLN 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I VVSV+APN PA+YE+HFAVPM+GA+ N INTRLDA +I+ IL+H++ K++F+
Sbjct: 61 IAKNDVVSVVAPNTPAIYEMHFAVPMAGAVLNPINTRLDATSITTILRHAQPKILFIHRN 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
L E++ L L++I D+ S+ R+ + YE+++ G+P
Sbjct: 121 FEPLAREILHLLSCDDLQLNLLVIFIDEYNSAK-----RVSSEEL--DYESLIQMGEPTS 173
Query: 181 SWV----RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
V R +++ DP+ LNYT GTT+ PKGVV ++ ++ ++ +I W + V LW
Sbjct: 174 PLVENMFRIQNEQDPISLNYTSGTTADPKGVVISHRGAYLTSLGVIIGWEMSTCPVYLWI 233
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
S W +G ++ R H + P+ ++ S
Sbjct: 234 FAYV-----SLQWMDVYMGNSSA--------------RGHQCVYEPRNPLDMSHRSG--- 271
Query: 297 AKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
PV ++T GSP PA ++ + + LGF V H YG TE G + C W+ +WN+L
Sbjct: 272 ------PVHLMTGGSPLPAALVKKVQRLGFQVLHVYGLTEATGPALFCEWQDEWNRLTEN 325
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
++ LKARQG+ + + EVD+ ET SV DG+T GEIVM+G ++M GYLK+ +AT +
Sbjct: 326 QQMELKARQGLGILSVAEVDVKYNETQESVPHDGKTMGEIVMKGNNIMKGYLKNSKATFE 385
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
K G TGDVG++HPDG++EIKDRSKD+IISGGENISS E+E++LY HP V E AVV
Sbjct: 386 AFKHGWLNTGDVGVIHPDGHIEIKDRSKDIIISGGENISSVEVENILYKHPRVFEVAVVA 445
Query: 477 RPDPFWQEIPCAFVSLKTGT-----DSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDEL 531
P W E PCAF+ L+ G D + EK++I YCR +P +M P+ VVF++EL
Sbjct: 446 MPHRVWGETPCAFIVLQKGETNKEDDEYKFVAREKELIDYCRENLPHFMCPRKVVFLEEL 505
Query: 532 PKTATGKVQK 541
PK GK+ K
Sbjct: 506 PKNGNGKILK 515
>gi|148653908|ref|YP_001281001.1| AMP-dependent synthetase and ligase [Psychrobacter sp. PRwf-1]
gi|148572992|gb|ABQ95051.1| AMP-dependent synthetase and ligase [Psychrobacter sp. PRwf-1]
Length = 560
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/564 (39%), Positives = 323/564 (57%), Gaps = 34/564 (6%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYND-----TTYTWSQTYRRCLQLASSLSS 58
L AN PLTPL F+ RAA+ SIIY+D TYTWSQT+ RC +LA +L
Sbjct: 8 LGKTEANHQPLTPLQFLTRAASVYPHKTSIIYDDLVNTPITYTWSQTFERCRKLAHALRK 67
Query: 59 FGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD 118
GI V+++APN PAM E F VPMS + T+NTRLD ++ L+HSE+K++ +D
Sbjct: 68 LGIGKEDTVAIMAPNTPAMVEAAFGVPMSQGVLCTLNTRLDINALTFCLQHSEAKVLIID 127
Query: 119 HLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP 178
+ + + FP L+LI ++ P +P + +YE +L G+
Sbjct: 128 SEYAHHVELIEETFP------NLILI------HATDMTLPDVPAFGKM-SYEALLQSGEF 174
Query: 179 QF--------SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQ 230
+ P + D + LNYT GTT PKGVV ++ + A+ +++DW +PK
Sbjct: 175 DSDEAIRAFDGTIYPTDEWDAIALNYTSGTTGKPKGVVYHHRGATLNALSNILDWDMPKH 234
Query: 231 SVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNL 290
+ LWTLP+FH NGW F W A NVCLR+ DA + LI K+ +TH C APIV N+
Sbjct: 235 TTYLWTLPLFHCNGWCFPWTVAERAGINVCLRQIDANLILKLIAKYQITHYCAAPIVHNM 294
Query: 291 LSSSPEAKQ--LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKP 348
+++ Q ++ V+ AG+PP +L + E++ F V+H YG TE+ G CA
Sbjct: 295 IAAGDSQLQQAINHNVKGFVAGAPPSEAMLEKMEAMNFNVTHVYGLTEVYGPVTICAEHD 354
Query: 349 KWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYL 408
+W +L ERA+ K+RQGV + ++ ++ T V D GE+ ++G +M GYL
Sbjct: 355 EWQQLSVSERAAKKSRQGVVSHLMSGFEVFKQGTTEPVAADATEMGELALKGNMVMKGYL 414
Query: 409 KDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPM 468
K+P+AT + G + TGD+G+ +PDGY++I DR KD+IISGGENISS EIE+ LY P
Sbjct: 415 KNPKATKEAFAGGWFRTGDLGVKYPDGYIKIMDRLKDIIISGGENISSIEIENTLYKMPE 474
Query: 469 VNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFI 528
V+ VV + W E+P AF+ + + G T +I++CR + ++ VPK V+F
Sbjct: 475 VSSCGVVAASNDKWGEVPVAFIEI-----AEGATLTRDQVIEHCRQHLAKFKVPKHVIFC 529
Query: 529 DELPKTATGKVQKYVLGDIANSMS 552
E+PKT+TGK+QK+ L + A SM+
Sbjct: 530 -EIPKTSTGKIQKFELRNAAQSMA 552
>gi|222641946|gb|EEE70078.1| hypothetical protein OsJ_30069 [Oryza sativa Japonica Group]
Length = 492
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 228/552 (41%), Positives = 313/552 (56%), Gaps = 72/552 (13%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ P+ AN PLTP+ F+ERAA D +++ Y+W +T RCL AS+L+ G
Sbjct: 1 MEGCMPSDANYAPLTPVSFLERAAVVYGDRTAVVSGGREYSWRETRERCLAGASALARLG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ VV+VIA NIPAMYELHF+VPM+G + T+NTR DA +S++L+HSE+K+ V+
Sbjct: 61 VGRRDVVAVIAANIPAMYELHFSVPMAGGVLCTLNTRHDAAMVSVLLRHSEAKVFLVESQ 120
Query: 121 SSSLLLEVVSLFP-PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
++ + + L +K P ++ I+D + SSS YE +L
Sbjct: 121 FLAVAHDALRLLADAKAKFPLVIAISDTGDSSSSDGGGLE---------YEALLRDAPRG 171
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F P + DP+ LNYT GTTS PKGV+ ++ ++ ++ +L+ + V LWT+PM
Sbjct: 172 FEIRWPADERDPISLNYTSGTTSRPKGVIYSHRGAYLNSLAALLCNDMTSMPVYLWTVPM 231
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW W A G T++C
Sbjct: 232 FHCNGWCMAWATAAQGG----------------------TNIC----------------- 252
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
VL + E LGF V HGYG TE G C W+P+W+ LP ERA
Sbjct: 253 -----------------VLAKMEELGFNVQHGYGLTETYGPATRCVWRPEWDALPLAERA 295
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+KA QGV+ L +VDI DP T SV DG+ GE+++RG ++M GY KD AT + M+
Sbjct: 296 RIKALQGVQHQMLQDVDIKDPVTMASVPSDGRAVGEVMLRGNTVMSGYYKDAAATEEAMR 355
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G TGD+G+ HPDGY+++KDR+KD+IISGGENISS E+ESVL+ H V +AAVV RPD
Sbjct: 356 GGWLRTGDLGVRHPDGYIQLKDRAKDIIISGGENISSIEVESVLFGHHAVLDAAVVARPD 415
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E CAFV+LK G + T +II +CRAR+PRYM P+TVVF D LPKT+TGK
Sbjct: 416 DHWGETACAFVTLKDGASA-----TAHEIIAFCRARLPRYMAPRTVVFGD-LPKTSTGKT 469
Query: 540 QKYVLGDIANSM 551
QK++L + A +M
Sbjct: 470 QKFLLREKARAM 481
>gi|302342241|ref|YP_003806770.1| AMP-dependent synthetase and ligase [Desulfarculus baarsii DSM
2075]
gi|301638854|gb|ADK84176.1| AMP-dependent synthetase and ligase [Desulfarculus baarsii DSM
2075]
Length = 536
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/537 (41%), Positives = 320/537 (59%), Gaps = 22/537 (4%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
L+P+ F+ R+A D ++I+ YT++Q R +L S+L G+ G V+ + PN
Sbjct: 11 LSPVKFLPRSAAIYPDKTAVIHGQDRYTYAQFAARVHRLGSALKKAGVGKGDKVAFLCPN 70
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
P M E H AVPM GA +INTRL + I I+ HS++K +FVD + +L V+
Sbjct: 71 TPPMLEAHHAVPMIGAALVSINTRLSPQEIGYIVNHSDAKALFVDTELAPQILPVLD--- 127
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMV 193
+L L + ++I +S P + P +YE LA G + V +
Sbjct: 128 ---DLRQLRLRVNIQDIDDAS--PLKGP------SYEEFLATGSDEPLAVEVDDEYQIAT 176
Query: 194 LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAV 253
+NYT GTT PKGV+ ++ + A+ +++ + SV LWTLPMFH NGW FTWG
Sbjct: 177 INYTSGTTGKPKGVMYHHRGACLNALGEMLEAKLNTNSVYLWTLPMFHCNGWCFTWGVTA 236
Query: 254 VGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK--QLDRPVRILTAGS 311
GAT+VCLRK +F LI GVT++C AP VL +++ P A ++ + I+TAG+
Sbjct: 237 AGATHVCLRKVVPEEIFRLIEHEGVTNLCAAPTVLVSMANYPGAANARMKAHLEIMTAGA 296
Query: 312 PPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIG 371
PP V+ E+LG V+ YG TE+ G + CAW+ KW+ LP ERA++KARQGV
Sbjct: 297 PPAPAVIKSMENLGANVTQTYGLTEVFGPHSICAWQTKWDNLPLDERAAIKARQGVPYTV 356
Query: 372 LTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMM 431
+D+VD + V DG+T GEIVMRG ++MLGY KDPEAT++ + G +++GD+ ++
Sbjct: 357 ALHMDVVDQLSMAPVPHDGKTIGEIVMRGNNVMLGYYKDPEATAEAFRGGWFHSGDLAVV 416
Query: 432 HPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVS 491
HPDGY++I DRSKD+IISGGENIS+ E+ESVLY HP V E AV+ PD W E P A+V+
Sbjct: 417 HPDGYVQIMDRSKDIIISGGENISTVEVESVLYGHPDVLEVAVIAVPDDKWGEAPKAYVT 476
Query: 492 LKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIA 548
LK G + +I +CR + ++ PK V F LPKTATGK+QK+ L + A
Sbjct: 477 LKEGAKPDA-----QSLIDFCRQHLAKFKAPKHVEF-GPLPKTATGKIQKFKLREEA 527
>gi|378549489|ref|ZP_09824705.1| hypothetical protein CCH26_05360 [Citricoccus sp. CH26A]
Length = 557
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/544 (41%), Positives = 318/544 (58%), Gaps = 30/544 (5%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
A++ PLTPLGF+ RAA D +++Y T+ + QLA ++ + I PG V+
Sbjct: 23 ASTEPLTPLGFLGRAAAVFPDREAVVYGARRSTYREFAAEVQQLARAVRAR-IQPGETVT 81
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
VIAPNIPAM HFAVP++G + + +N RL AR ++ IL+HSE+++VF D + + +V
Sbjct: 82 VIAPNIPAMLMAHFAVPLAGGVLSPLNPRLTARELAYILEHSEARVVFADGDVVATVRDV 141
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD------TYENMLAKG--DPQF 180
V P + P +V I D P A VD TYE+ LA+G P
Sbjct: 142 VGNLP---QAPLVVEIVD-----------PEAGHAGPVDADAGSLTYEDFLAQGPAGPDL 187
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
W R + P+ LNYT GTT PKG + ++ ++ A ++ + LWTLPMF
Sbjct: 188 PW-RVADEHAPITLNYTSGTTGPPKGALYTHRGAYLAAEGAVFHNGYTGATRYLWTLPMF 246
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGW W T+VCLR ++ G+TH+CGAPIV ++ S A+ L
Sbjct: 247 HCNGWCTPWAVTSAAGTHVCLRAVRQDAIWDAFDHEGITHLCGAPIVCAMIHESERARPL 306
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
DR +R+ TAG+ PP V+ ESL H YG TE+ G C +P W +LPA ERA
Sbjct: 307 DRELRMTTAGAAPPPSVIEALESLNITPVHVYGLTEVYGPFTICEPQPAWARLPAAERAR 366
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
L ARQGV + EV ++D + V DG+T GE+V+RG +M Y K+PEAT++ +
Sbjct: 367 LMARQGVPMVHAGEVAVMDADLN-RVPADGETLGEVVLRGNGVMKEYFKNPEATAEAFRG 425
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G Y+TGD+G+MHPDGY+++ DR+KD+IISGGENISS E+E VL++HP V++ AVVG D
Sbjct: 426 GWYHTGDLGVMHPDGYIQLMDRAKDIIISGGENISSIEVEGVLHAHPKVSDVAVVGVQDD 485
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E P AFV T++G +T E ++ +CR + + VP V F+ ELP+TATGK++
Sbjct: 486 RWGERPVAFVV----TEAGAQVTAE-ELRAHCRQGLAGFKVPDRVEFVQELPRTATGKIR 540
Query: 541 KYVL 544
K L
Sbjct: 541 KNTL 544
>gi|254240648|ref|ZP_04933970.1| AMP-binding protein domain [Pseudomonas aeruginosa 2192]
gi|126194026|gb|EAZ58089.1| AMP-binding protein domain [Pseudomonas aeruginosa 2192]
Length = 549
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/547 (40%), Positives = 321/547 (58%), Gaps = 16/547 (2%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PN AN PL+PL F++RAA +++Y Y++ Q + R LAS+L G+
Sbjct: 10 LAPNEANHVPLSPLSFLKRAAQVYPQRDAVVYGARRYSYRQLHERSCALASALERVGVQA 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+++APNIP M E H+ VP +GA+ IN RL+AR+I+ IL+H ++++ D +
Sbjct: 70 GERVAILAPNIPEMLEAHYGVPGAGAVLVCINIRLEARSIAFILRHCAARVLICDREFGA 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ + +++ P LV I DD+ R A +D YE LA+GDP
Sbjct: 130 VAQQALAML---DAPPLLVGIDDDQA--------ERADLAHDLD-YEAFLAQGDPGRPLG 177
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+++ + +NYT GTT PKGVV ++ ++ A + + + +S+ LWTLPMFH N
Sbjct: 178 APQNEWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGALIFQLGPRSIYLWTLPMFHCN 237
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GWS TW + G T+VCLRK + A I +H VTH+ AP+V+++L + A P
Sbjct: 238 GWSHTWAVTLSGGTHVCLRKVQPDAIHAAIAEHAVTHLSAAPVVMSMLIHAEHASVPAVP 297
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
V ++T G+ PP+ V+ E+ GF ++H YG TE G + C W+P ++LP RA +
Sbjct: 298 VSVITGGAAPPSAVIAAMEARGFSITHAYGMTESYGPSTLCLWQPGVDELPLEARAQFMS 357
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQGV L E ++D +TG V DG+T GE+V+RG ++M GYL +PEAT + DG
Sbjct: 358 RQGVAHPMLEEATVLDTDTGRPVPADGRTLGELVVRGNTVMKGYLHNPEATRAALADGWL 417
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
+TGD+ ++HPDGY+EIKDR+KD+II + E VLY HP V EAAVV D W
Sbjct: 418 HTGDLAVLHPDGYVEIKDRAKDIIIPAARTSARWRSEEVLYQHPEVVEAAVVRARDSRWG 477
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E P AFV+L+ TT D++++CR R+ + P+ V + ELPKTATGK+QK+V
Sbjct: 478 ETPHAFVALRADALP---RTTGDDLVRWCRERLAHFKAPRHVT-LTELPKTATGKIQKFV 533
Query: 544 LGDIANS 550
L + A
Sbjct: 534 LREWARQ 540
>gi|255263036|ref|ZP_05342378.1| AMP-dependent synthetase and ligase [Thalassiobium sp. R2A62]
gi|255105371|gb|EET48045.1| AMP-dependent synthetase and ligase [Thalassiobium sp. R2A62]
Length = 541
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/545 (40%), Positives = 311/545 (57%), Gaps = 20/545 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTPL + RAA D +++Y DT + +RR QLAS+L+ G+ PG VV+
Sbjct: 15 ANYVPLTPLSHLNRAARVFPDHDAVVYGDTVMDYKTYHRRVTQLASALTKAGVEPGEVVA 74
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PN PA E F VP GA+ NTIN RLD T++ I H +K+V D L +E
Sbjct: 75 TLLPNTPAQCEAAFGVPACGAVLNTINIRLDVDTVAYIFDHGGAKVVITDSQFLPLTMEA 134
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
++ P ++ + D P +P YE+ L GD F W+ P +
Sbjct: 135 IAQM--EGPAPLVIEVPD---------PVAGVPGLGEQMDYEDFLLAGDTDFEWIMPADE 183
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
+ + LNYT GTT PKGVV ++ +++ + ++I W + + +P+FH NGW+ T
Sbjct: 184 WESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVISWRMTLHPRFMAIVPLFHCNGWNHT 243
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLDRPVRI 306
W V+G T VC R A ++ I GVTH GAPIVLN++ ++ + K D V +
Sbjct: 244 WMMPVLGGTVVCCRDITAAAIYDGIADRGVTHFGGAPIVLNMIVNAVDGDRKTFDHTVEV 303
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
TAG+PP L +GF ++ YG TE G C W W+ L E++S+KARQG
Sbjct: 304 FTAGAPPAPATLAAIGEMGFNITQVYGLTETYGHVTECIWNDAWDTLHQEEQSSIKARQG 363
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
V + +V +VD E V D QT+GEIVMRG S+M GY K+PEAT+K +G +++
Sbjct: 364 VAFPMMEDVTVVD-EQAQQVPMDAQTQGEIVMRGNSVMKGYYKNPEATTKAFANGYFHSE 422
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+ + HPDGY++I DR+KD+IISGGENISS E+E L HP V AVV +PD W E P
Sbjct: 423 DLAIQHPDGYIQIADRAKDIIISGGENISSVEVEGALMHHPAVLLCAVVAKPDDKWGETP 482
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546
CAF+ LK G + TE ++I + + R+ + PKTVVF ELPKT+TGK+QK+ L
Sbjct: 483 CAFIELKDGATA-----TEAEMIAHTKTRLASFKCPKTVVF-QELPKTSTGKIQKFELRT 536
Query: 547 IANSM 551
A ++
Sbjct: 537 FAKTL 541
>gi|363422715|ref|ZP_09310789.1| acyl-CoA ligase/synthetase [Rhodococcus pyridinivorans AK37]
gi|359732824|gb|EHK81833.1| acyl-CoA ligase/synthetase [Rhodococcus pyridinivorans AK37]
Length = 544
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/539 (41%), Positives = 316/539 (58%), Gaps = 19/539 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN ++PL F+ER+A D +II+ D TYT+++ +LA L S I PG ++
Sbjct: 14 ANYSQMSPLRFLERSAAVFPDRTAIIHGDRTYTYAEFADEAQRLARVLRSR-IEPGDKIA 72
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PN+P M HFAVP++G + +N+RL + IL HSE+KL+FVD S LL V
Sbjct: 73 YLTPNVPEMLIAHFAVPLAGGVLVALNSRLAGPELEYILDHSETKLLFVD---SELLGSV 129
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKS- 187
+ P + I E+ S+ P P +P Y+ LA+ D + P S
Sbjct: 130 AKV---RDNVPGVAEII---EVPDSTVPAPEVPAGVATARYDEFLAQADSLDATPLPWSV 183
Query: 188 --DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGW 245
+L + LNYT GTT PKGV+ ++ ++ ++ QS LWTLPMFH NGW
Sbjct: 184 DDELGVITLNYTSGTTGKPKGVMYTHRGAYLNSLGETFHNSFDGQSKYLWTLPMFHCNGW 243
Query: 246 SFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVR 305
W T++CLR A ++ I GVT++CGAP V + ++++ +A LDRP+R
Sbjct: 244 CTPWAVTAAAGTHICLRAVRADAIWDAIDNLGVTNLCGAPAVCSTIANAEQAHPLDRPLR 303
Query: 306 ILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
I TAG+PP V+ + E +G V H YG TE+ G C ++ W+ PA ERA+L +RQ
Sbjct: 304 ITTAGAPPSPTVIAQLEQIGITVVHVYGLTEVYGPYTICEYQDSWDDKPADERAALLSRQ 363
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYT 425
GV + +VD + V DG+T GEIV+RG ++MLGY KDP+AT + + G ++T
Sbjct: 364 GVGMLQAETARVVDEDMN-DVPADGETMGEIVLRGNNVMLGYYKDPDATEEAFRGGWFHT 422
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+G+M+PDGY+++KDR+KD+IISGGENIS+ E+E + SHP V + AVVG PD W E
Sbjct: 423 GDLGVMYPDGYIQLKDRAKDIIISGGENISTVEVEQAIVSHPAVLDVAVVGVPDEKWGER 482
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P AFV LK G T ++II Y R + Y VP+ +VF ELP+T+TGK+ K+ L
Sbjct: 483 PKAFVILKKGES-----VTAEEIIDYTRTLLAGYKVPRDIVFPLELPRTSTGKILKFEL 536
>gi|304394314|ref|ZP_07376237.1| acyl-CoA synthetase [Ahrensia sp. R2A130]
gi|303293754|gb|EFL88131.1| acyl-CoA synthetase [Ahrensia sp. R2A130]
Length = 568
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/552 (42%), Positives = 320/552 (57%), Gaps = 25/552 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L N AN LTPL F+ RA + Y T +W + Y RC++ AS+L++ GI
Sbjct: 28 LDANTANFAALTPLSFLRRARDVYPHRTAYAYESLTRSWGEVYERCVRFASALNARGIGR 87
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V++IAPNIP M+EL FAV M+GA+ N IN RLDA TI+ IL H E+KL+ D +
Sbjct: 88 GDTVAIIAPNIPEMFELQFAVAMAGAVMNPINIRLDAATIAYILDHGEAKLLVTDTRFAP 147
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
++ P K + + + D I + P +DT E + GDP + WV
Sbjct: 148 ------AVEPALEKLGRALPVID---IVDGETDEPEGKRLGEMDT-EAFIRLGDPAYDWV 197
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQ-------SVLLWT 236
P + D + LNYT GTTS PKGVV ++ +IA+ + W + V ++
Sbjct: 198 MPTDEWDAISLNYTSGTTSDPKGVVVHHRGAHLIALGTAASWPMTGGLEGDATFPVHMYV 257
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSS 294
+P+FH NGW W A G +V +R +A ++A I H VTH GAPIVL++L ++
Sbjct: 258 VPLFHCNGWGHAWALAATGGMSVLIRNVNAKNLYAAIGAHRVTHFGGAPIVLSMLINATD 317
Query: 295 PEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLP 354
E K D P+R TA +PPP VL + GF ++H YG TE G + CA + +W P
Sbjct: 318 EERKDFDWPIRAYTAAAPPPPAVLAAVKKAGFTLTHVYGLTETYGHVLECAPQAEWLGKP 377
Query: 355 ARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEAT 414
E A L +RQGVR L +V + DP+T V DG+T GEI++RG +M GY ++P A+
Sbjct: 378 NDELAELNSRQGVRYAVLEDVMVADPDTMEPVPADGETIGEIMVRGNVVMKGYYRNPSAS 437
Query: 415 SKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474
G ++TGD+ +M+ DGYL+IKDRSKD+IISGGENISS EIE +L H V AAV
Sbjct: 438 EAAFAGGWFHTGDLAVMNADGYLKIKDRSKDIIISGGENISSVEIEGILAGHEDVMAAAV 497
Query: 475 VGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKT 534
V +PD W E PCAF+ LK G SG T + +CR R+ + VPKT +F +ELPKT
Sbjct: 498 VAKPDEKWGETPCAFLELKPGK-SGDTAT----MTAWCRERMASFKVPKTFIF-EELPKT 551
Query: 535 ATGKVQKYVLGD 546
+TGK+QK+VL D
Sbjct: 552 STGKIQKFVLRD 563
>gi|441209582|ref|ZP_20974267.1| AMP-dependent synthetase and ligase [Mycobacterium smegmatis MKD8]
gi|440627073|gb|ELQ88893.1| AMP-dependent synthetase and ligase [Mycobacterium smegmatis MKD8]
Length = 575
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/537 (41%), Positives = 319/537 (59%), Gaps = 32/537 (5%)
Query: 13 PLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAP 72
PLTP +++RAA+ D +++ + ++T+ Q ++R QLA L+ ++ G V+V+AP
Sbjct: 61 PLTPTAYLDRAASCHGDRLAVVDGERSWTYEQLHQRSAQLAGGLAQ--LSAGRPVAVLAP 118
Query: 73 NIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLF 132
N + E HF VP SG+ +NTRL A I+ +L HSE+ ++ D + + L+ +V
Sbjct: 119 NSHVLLEGHFGVPWSGSPLIALNTRLSAPEIAYMLGHSEASVLIYDPIFTDLVEQVRGQM 178
Query: 133 PPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPM 192
S +P LV DD + YE ML+ P P +L +
Sbjct: 179 ---SASPVLVQAGDDPQ-----------------SEYEQMLSAASPLRR--TPSDELALL 216
Query: 193 VLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAA 252
+NYT GTT PKGV+ ++ ++ A+ + + +V LWTLPMFH NGW F W
Sbjct: 217 SVNYTSGTTGKPKGVMYSHRGAYLQALAMVGHTGLSPSAVYLWTLPMFHCNGWCFPWAVT 276
Query: 253 VVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD-RPVRILTAGS 311
AT+VCLRK D ++ LIR+ GVTH+ GAP VL++++ +PEA ++ PVRI T G+
Sbjct: 277 AAAATHVCLRKVDPSEIWRLIRQQGVTHLNGAPTVLSMIAHAPEADTIEGTPVRIATGGA 336
Query: 312 PPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIG 371
PP +L R +LGF V+H YG TE G C W+P+WN+L RA +KARQGV +
Sbjct: 337 PPSPAILRRMSALGFDVTHLYGLTETYGPAAICDWRPEWNELDLEARAKIKARQGVGNMI 396
Query: 372 LTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMM 431
E+ +V E G + DG + GEI +RG ++M+GYL DP AT DG + TGD+G+
Sbjct: 397 SCEIRVV-AEDGTDMPSDGASIGEIALRGNNVMVGYLHDPTATEAAAPDGWFRTGDLGVR 455
Query: 432 HPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVS 491
HPDGY+E++DRSKDVIISGGENI+S E+E + HP V E AV+ PDP W E+P A V+
Sbjct: 456 HPDGYIELRDRSKDVIISGGENIASVEVEQAIMEHPAVLEVAVIAVPDPQWGEVPAAHVA 515
Query: 492 LKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIA 548
LK G ++ T +II + RA I R+ PK VF ELPKT+TGK QKY+L + A
Sbjct: 516 LKPGCEA-----TADEIIDHVRATIARFKAPKH-VFFGELPKTSTGKTQKYLLRERA 566
>gi|126725183|ref|ZP_01741026.1| AMP-dependent synthetase and ligase [Rhodobacterales bacterium
HTCC2150]
gi|126706347|gb|EBA05437.1| AMP-dependent synthetase and ligase [Rhodobacteraceae bacterium
HTCC2150]
Length = 542
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/551 (39%), Positives = 321/551 (58%), Gaps = 21/551 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN LTPL ++RAA D +++Y D +++Q + R LA L GI P
Sbjct: 10 LDRTPANHVALTPLSHLQRAAIVFADRTALVYQDLRLSYAQYHNRVSSLADGLRKKGITP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+ I PNIPA E HFAVP G + NTIN RLD T++ IL+H E+ + VD +
Sbjct: 70 GDVVATILPNIPAQVEAHFAVPAMGGVLNTINIRLDTDTVTYILEHGEAVALLVD--TQF 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L L ++ + P+++ + D P +TY+++LA GDP W
Sbjct: 128 LPLAEAAIANMTGEKPRVIEVPD---------AGAGFPATGRYETYDDLLAAGDPNAPWT 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + + LNYT GTT PKGVV ++ +++ + +++ W + L +P+FH N
Sbjct: 179 MPEDEWESISLNYTSGTTGRPKGVVAHHRGAYLMTMGTVVSWRLQLYPKYLTIVPLFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
GW+ TW V+G T VC R ++ I GV + GAPIVLN++ ++ + + D
Sbjct: 239 GWNHTWMMPVLGGTVVCCRDITPAAIYDAIADEGVAYFGGAPIVLNMIVNAKDEDRRDFD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKP-KWNKLPARERAS 360
V + TAG+PP L ESLGF ++ YG TE G C W +W +L +RA+
Sbjct: 299 HTVEVFTAGAPPAPATLAAIESLGFNITQVYGLTETYGHVTECVWDDTRWGELNGADRAN 358
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
+KARQGV + ++ ++D + V RDG T+GEI++RG S+M GYLK+PEAT++
Sbjct: 359 IKARQGVAFPMMEDIAVLDGDM-QPVNRDGATQGEIMIRGNSVMKGYLKNPEATAEAFAG 417
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +++GD+ H DGY++I DR+KD+IISGGENISS E+E L +HP ++ AVV +PD
Sbjct: 418 GYFHSGDLANQHDDGYIQIADRAKDIIISGGENISSVEVEGALMNHPAISLCAVVAKPDD 477
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV LK G + TE ++I + R R+ + PK V+F ELPKT+TGK+Q
Sbjct: 478 KWGEVPCAFVELKEGETA-----TESEVITFVRERLAGFKTPKRVIF-QELPKTSTGKIQ 531
Query: 541 KYVLGDIANSM 551
K+ L +A +
Sbjct: 532 KFELRGVAKDL 542
>gi|124266628|ref|YP_001020632.1| CoA ligase [Methylibium petroleiphilum PM1]
gi|124259403|gb|ABM94397.1| putative CoA ligase (AMP-forming) [Methylibium petroleiphilum PM1]
Length = 552
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/550 (39%), Positives = 323/550 (58%), Gaps = 17/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN L+P+ F+ER+A D P++++ TW+QT R +LA++L + G+
Sbjct: 12 LDQTTANFVALSPVSFVERSAEVFGDLPAVVHGARRQTWAQTRERSARLAAALRALGVAR 71
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VSV+ PN P M E H+AVP A+ NT+NTRLDA ++ + H E++++ D +
Sbjct: 72 GSTVSVMLPNTPEMVEAHYAVPALNAVLNTLNTRLDAALLAWQMNHCEAQVLITDREFAP 131
Query: 124 LLLEVVSLF-PPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
+ E + L H +TP ++ + D S + P R+ + YE +LA P
Sbjct: 132 TIAEALRLLHSEHGRTPIVIDVCD----SEYAGPGDRLGTHE----YEALLAAHAPLARL 183
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P + D + ++YT GTT PKGVV ++ ++ AV + W +P + LWTLPMFH
Sbjct: 184 DGPADEWDAIAVSYTSGTTGDPKGVVTHHRGAYLNAVSNAATWTMPHFPIYLWTLPMFHC 243
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--L 300
NGW F W A++G T+VCLR+ DAP++ +R+H V H C APIV NLL ++P+ + +
Sbjct: 244 NGWCFPWTIAMLGGTHVCLRRVDAPSILGAMREHRVDHYCAAPIVHNLLIAAPDELRAGI 303
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
+ VR + AG+ PPA ++ LGF ++H YG TE+ G + W E+
Sbjct: 304 TQKVRGMVAGAAPPAAMIEGMAKLGFDITHVYGLTEVYGPAAVAVKRASWAGESLSEQTR 363
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
L RQGVR + ++DPET + DGQT GEI+ RG +M GYLK+P+A++
Sbjct: 364 LNGRQGVRYALQEGMTVLDPETMVETPADGQTMGEIMFRGNIVMKGYLKNPQASAAAFAG 423
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+ +M PD Y++IKDRSKD+IISGGENISS E+E LY HP V AVV RPDP
Sbjct: 424 GWFHTGDLAVMEPDRYVKIKDRSKDIIISGGENISSIEVEDALYRHPAVMACAVVARPDP 483
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E P A+V LK G + + +++ +C++ + Y PK V F + +PKT+TGK+Q
Sbjct: 484 KWGETPVAYVELKPGAE-----VSAAELVTHCKSLLAGYKAPKEVRF-EAIPKTSTGKIQ 537
Query: 541 KYVLGDIANS 550
K+ L + A S
Sbjct: 538 KFQLRERARS 547
>gi|15223009|ref|NP_177756.1| AMP-dependent synthetase and ligase family protein [Arabidopsis
thaliana]
gi|75313415|sp|Q9SFW5.1|AEE21_ARATH RecName: Full=Probable acyl-activating enzyme 21
gi|6554489|gb|AAF16671.1|AC012394_20 putative AMP-binding protein; 80053-82018 [Arabidopsis thaliana]
gi|332197700|gb|AEE35821.1| AMP-dependent synthetase and ligase family protein [Arabidopsis
thaliana]
Length = 546
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/554 (39%), Positives = 327/554 (59%), Gaps = 24/554 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+P+ F+ERAA S++Y D YTW QT RC++LAS+LS G++ VV+
Sbjct: 9 ANYVPLSPISFLERAAVVFGSRTSVVYGDIQYTWHQTRDRCVRLASALSDLGLSRHDVVA 68
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+APN+PA+ EL+F PM+GA+ +NT D++ +++ L+ ++ K+ FVD S+ E
Sbjct: 69 ALAPNVPALCELYFGAPMAGAVLCVLNTTFDSQMLAMALEKTKPKVFFVDSEFLSVAEES 128
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
+SL + P ++ IT++ S + YE+ L+ G+P F +RP +
Sbjct: 129 LSLLSNIEEKPLIITITENPTEQSK------------YEQYEDFLSTGNPNFKPIRPVDE 176
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
DP+ LN+T GTTS PK VV ++ ++ A + + V L T+PM+H +GW +
Sbjct: 177 CDPIALNFTSGTTSTPKCVVYSHRGAYLNATAVGVMNEMKPMPVYLCTVPMYHCSGWCYI 236
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP--VRI 306
W G VCLR+ + +F I KH VT+ G+P VLN+++++ ++ + P V++
Sbjct: 237 WTVTAFGGVIVCLREVNDEVIFDSIVKHKVTNFGGSPPVLNMIANARDSVKKSFPWTVQV 296
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
++ GS PP V+L+ + LGF V YG +E+ G+ +C W P+W LP E LKAR G
Sbjct: 297 MSGGSSPPE-VMLKLKKLGFKVMMAYGCSEVYGLGTACLWMPEWETLPEEESLRLKARDG 355
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
+ VD++DP T SV DG+T I +RG ++M GY KD EAT + G Y++
Sbjct: 356 LNHFAKEAVDVLDPTTMKSVPHDGKTIRVIALRGNTVMSGYFKDKEATEAAFRGGWYWSR 415
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+G++ PDGY++ KDRS+DVI GGE + S EIE +LYSHP V +A VVGRPD E
Sbjct: 416 DMGVIDPDGYIQFKDRSQDVITCGGEIVGSKEIEGILYSHPAVYDAGVVGRPDETLGESM 475
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPR---YMVPKTVVFIDELPKTATGKVQKYV 543
CAFV LK G E++II++C+ ++ M+PKTVVF D +PKT TGK++K V
Sbjct: 476 CAFVKLKEGA-----EAREEEIIEFCKRKLGNKNMKMIPKTVVFSD-VPKTPTGKIRKNV 529
Query: 544 LGDIANSMSMSHSR 557
L +A M R
Sbjct: 530 LRKMAKDMGYVQLR 543
>gi|359494714|ref|XP_002268559.2| PREDICTED: medium-chain-fatty-acid--CoA ligase-like, partial [Vitis
vinifera]
Length = 482
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/488 (42%), Positives = 305/488 (62%), Gaps = 14/488 (2%)
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V+ +APNIPA+YELHF VPM+GAI + +N RLD+ +++IL+ E+K++FVD+ + L
Sbjct: 1 VAALAPNIPALYELHFGVPMAGAILSALNPRLDSTMLALILQQLEAKIIFVDYQFLQVFL 60
Query: 127 EVVSLFPPHS-KTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRP 185
+ + + K P LVLI + ++ SS +IP + Y+ +LA G P F +RP
Sbjct: 61 QALDILSEAKIKPPILVLILECCHPATFSSTIEKIPAGNL--DYDGLLAMGQPDFEIIRP 118
Query: 186 KSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGW 245
++ P+ +NYT G+T PKGVV ++A ++ ++ + + + V LWT+ MF NGW
Sbjct: 119 SNECTPISVNYTSGSTGNPKGVVYSHRAAYLNSLAVIFRSDLKQMPVFLWTVDMFRCNGW 178
Query: 246 SFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDRP 303
F W A + TN+CLRK A ++ I H VTH CGAP +LNL++ + Q L
Sbjct: 179 CFPWTVAALCGTNICLRKVSAKVIYGAIFLHNVTHFCGAPSLLNLIADAAVTDQRPLPHK 238
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
V I+ AG+ PP VL++ LGF V+H YG TE G + W P+ N + + A +K
Sbjct: 239 VDIVIAGALPPPQVLMKVVELGFNVTHSYGMTEALGPVTARLWHPEPN---SYQHAKIKC 295
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
QG+ + + VD+ DP T SV RD +T GE++ RG ++M+GY K+ +AT + + G Y
Sbjct: 296 CQGLHNLIMEGVDVKDPSTMKSVPRDRKTIGEVMFRGNTMMMGYHKNLKATQEAFRGGWY 355
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
TGD+ +MHPDGY+++KDRSKDVIISG + IS+ EIE+VL HPMV E AVVGRPD
Sbjct: 356 RTGDLAVMHPDGYIQMKDRSKDVIISGVKTISTIEIEAVLVGHPMVMEVAVVGRPDDCLG 415
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E PCAF+ LK G T+ +I +C R+P YMVP+T++F D LP +TGK+QK+V
Sbjct: 416 ETPCAFLKLKEGC-----ATSADEITNFCAERLPTYMVPQTIIFGD-LPVNSTGKIQKFV 469
Query: 544 LGDIANSM 551
L + A ++
Sbjct: 470 LREKAKAV 477
>gi|388565593|ref|ZP_10152078.1| putative CoA ligase [Hydrogenophaga sp. PBC]
gi|388267161|gb|EIK92666.1| putative CoA ligase [Hydrogenophaga sp. PBC]
Length = 574
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/555 (39%), Positives = 320/555 (57%), Gaps = 21/555 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
L PAN PL+P+ F+ER A D P++++ W+Q R +LA++L + G+
Sbjct: 34 QHLDRTPANFAPLSPVSFVERTAEVFGDMPAVVHGARHLNWAQVRDRSARLAAALRALGV 93
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
G VS + PN P M E H+A+P GA+ NT+NTRLDA ++ + H ESK++ D
Sbjct: 94 GRGDTVSTLLPNTPEMVEAHYAIPALGAVINTLNTRLDAPLLAWQMNHCESKVLITDREF 153
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
+ ++ + ++ ++ ++ + D S + P R+ + YE ++A +P
Sbjct: 154 APVVAKALAAM---NRAITVIDVCD----SEYTGPGDRLGAYE----YETLIAAHEPLPR 202
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
P + D + ++YT GTT PKGVV ++ ++ AV +++ W +P+ LWTLPMFH
Sbjct: 203 LDGPADEWDAIAVSYTSGTTGDPKGVVTHHRGAYLNAVSNVVTWTMPQFPRYLWTLPMFH 262
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIV----LNLLSSSPEA 297
NGW F W A+ +VCLR+ + + A +R+HGV H C APIV L+ +++ P
Sbjct: 263 CNGWCFPWTVALQAGVHVCLRRVEPAAILAAMREHGVDHYCAAPIVHNGVLSAVAADPAL 322
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
K VR + AG+ PPA ++ LGF ++H YG TE+ G +P W E
Sbjct: 323 KDGIGAVRGMVAGAAPPASMIEGMARLGFAITHVYGLTEVYGPAAVAVARPNWASAELGE 382
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+ L RQGVR + ++DPET V DGQT GEI+ RG +M GYLK+P +T+K
Sbjct: 383 QVRLNGRQGVRYPLQEGMTVMDPETMQEVPADGQTMGEIMFRGNIVMKGYLKNPASTAKA 442
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++TGD+ ++ PD Y++IKDRSKD+IISGGENISS E+E LY HP V AVV +
Sbjct: 443 FDGGWFHTGDLAVLEPDRYVKIKDRSKDIIISGGENISSIEVEDALYRHPAVMACAVVAK 502
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PDP W E P AFV L+ G TTE ++I +CR + Y VPK V F + +PKT+TG
Sbjct: 503 PDPKWGESPLAFVELRPGAQ-----TTEAELIAHCRTLLAGYKVPKAVRF-EAIPKTSTG 556
Query: 538 KVQKYVLGDIANSMS 552
K+QK+ L + A S S
Sbjct: 557 KIQKFELRERAKSSS 571
>gi|331694437|ref|YP_004330676.1| o-succinylbenzoate--CoA ligase [Pseudonocardia dioxanivorans
CB1190]
gi|326949126|gb|AEA22823.1| o-succinylbenzoate--CoA ligase [Pseudonocardia dioxanivorans
CB1190]
Length = 534
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/532 (40%), Positives = 314/532 (59%), Gaps = 20/532 (3%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTPL F+ R++ +I+ + YT++Q ++A +L G+ G V+ + PN
Sbjct: 8 LTPLAFLRRSSEVYPGKTAIVAGERRYTYAQFAAETTRVAHALRGSGVQAGDRVAYLLPN 67
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
+P M HFAVP++GA+ INTRL + IL HS SK++ VD ++L V L
Sbjct: 68 VPEMLVAHFAVPLAGAVLVAINTRLSTEEVRYILDHSGSKVLVVD---AALYPVVAPLVG 124
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG-DPQFSWVRPKSDLDPM 192
+ +++ + D +SP I TY ++LA+G D W + +
Sbjct: 125 ELATVEEIITVVD------PASPGDGIGSGT---TYGDLLARGSDDPLPW-EVDDENRAI 174
Query: 193 VLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAA 252
+NYT GTT PKGV ++ ++ + ++ +V LWTLPMFH NGW W
Sbjct: 175 SINYTSGTTGRPKGVQYTHRGAYLNSFGEVVHSAHTPDTVYLWTLPMFHCNGWCTPWAVT 234
Query: 253 VVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSP 312
+G T+VCLR+ ++ LI +HGVTH+ GAP V+ + ++ EA +LD + I TAG+P
Sbjct: 235 GIGGTHVCLREVRGDVIWKLISEHGVTHLNGAPTVVTTIMNAAEAVKLDYQLVITTAGAP 294
Query: 313 PPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGL 372
P +L+ E +GF + H YG TE G ++ W++L A ERA+L+ARQGV I
Sbjct: 295 PSPTTILQMERMGFRIVHVYGLTETYGPYSVNQYQRAWDELDAEERAALQARQGVGMIQT 354
Query: 373 TEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMH 432
+ +VD E + V RDG T GEIVMRG ++M GY DPE T K G +++GD+G++H
Sbjct: 355 DALRVVD-EHMVDVPRDGATMGEIVMRGNNVMAGYYDDPEGTEKAFAGGWFHSGDLGVVH 413
Query: 433 PDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSL 492
PDGY+E++DR+KDV+ISGGENIS+ E+E + SHP V EAAVVG PD W E P AFV L
Sbjct: 414 PDGYVELRDRAKDVVISGGENISTVEVEQAVVSHPAVLEAAVVGVPDEQWGERPKAFVVL 473
Query: 493 KTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
K GG TT ++I++ +++I RY P+ V +DELPKT+TGKVQK+ L
Sbjct: 474 K-----GGQQTTPDEVIEHVKSKIARYKAPRDVEIVDELPKTSTGKVQKFEL 520
>gi|89055470|ref|YP_510921.1| AMP-dependent synthetase/ligase [Jannaschia sp. CCS1]
gi|88865019|gb|ABD55896.1| AMP-dependent synthetase and ligase [Jannaschia sp. CCS1]
Length = 543
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 229/544 (42%), Positives = 310/544 (56%), Gaps = 20/544 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PLTPL + RAA + ++I T+++ + R QLAS+L+ GI P
Sbjct: 10 LDKTPANFVPLTPLSHLARAARVFPNREAVIDGAHRKTYAEYHARVSQLASALARRGIAP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+ + PN E HF VP +GA+ N IN RLD TI+ IL H E+KLV VD +
Sbjct: 70 GDVVATVLPNTYPHAEAHFGVPAAGAVLNAINIRLDVSTIAYILDHGEAKLVLVD---TQ 126
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L V+ TP +++ S P YE++L +GD W
Sbjct: 127 FLPVVMDAVEAMDGTPPILI--------ECPSAVAGYPATGDHTIYEDLLREGDTDAPWH 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + + LNYT GTT PKGVV ++ ++I + + I W + L +PMFH N
Sbjct: 179 MPDDEWESISLNYTSGTTGRPKGVVYHHRGAYLITMGTPISWRMTLYPKYLTIVPMFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLD 301
W TW VG T VC R A ++ I GVTHM GAPIVLN+L ++ ++ + D
Sbjct: 239 NWCHTWMMPAVGGTLVCCRDITASAIYDAIADEGVTHMGGAPIVLNMLVNAKDSDRRDFD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWK-PKWNKLPARERAS 360
V + TAG+PP A L E++GF V+ YG TE G C W+ W+ L A RA
Sbjct: 299 HTVEVFTAGAPPAAATLAAIETMGFHVTQVYGLTESYGHATECVWQDSDWSALDAAARAG 358
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
+KARQGV + + ++DP+T + DG GEI+MRG S M GY K+P+AT++
Sbjct: 359 IKARQGVALPNMDHITVMDPDTMEQIPMDGAVTGEIMMRGNSTMKGYYKNPDATAEAFAG 418
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+ + HPD Y++I DR+KD+IISGGENISS E+E VL HP V AVV +PD
Sbjct: 419 GYFHTGDIAVQHPDSYIQIADRAKDIIISGGENISSVEVEGVLMHHPAVLLCAVVAKPDD 478
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W EIPCAFV LK G ++ TE +II + RAR+ + PK VVF ELPKT+TGK+Q
Sbjct: 479 KWGEIPCAFVELKEGAEA-----TEAEIIAFARARLAGFKTPKRVVFA-ELPKTSTGKIQ 532
Query: 541 KYVL 544
K+ L
Sbjct: 533 KFEL 536
>gi|389699767|ref|ZP_10185072.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Leptothrix
ochracea L12]
gi|388591339|gb|EIM31593.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Leptothrix
ochracea L12]
Length = 548
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/549 (39%), Positives = 316/549 (57%), Gaps = 14/549 (2%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
L AN L+P+ F+ER+A D P++I+ Y+W+QT R +LA++L + G+
Sbjct: 8 ELPKTAANFVALSPVSFVERSAEVFGDLPAVIHGTRRYSWAQTRDRSARLAAALRAMGVQ 67
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G VSV+ PN P M E H+AVP GA+ NT+NTRLDA ++ L H E++++ D +
Sbjct: 68 RGSTVSVMLPNTPEMIEAHYAVPALGAVLNTLNTRLDAALLAWQLNHCEAQVLITDSEFA 127
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
++ + ++L +V+ D E + + + YE +LA+ P
Sbjct: 128 PVMDKTLALLKSVHGRDLIVIDVCDSEFAGEHACLGQ-------HEYEELLAEYAPLVRL 180
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P + D + ++YT GTT PKGVV ++ ++ AV + W +P V LWTLPMFH
Sbjct: 181 EGPVDEWDAIAVSYTSGTTGDPKGVVTHHRGAYLNAVSNAATWTMPHFPVYLWTLPMFHC 240
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD- 301
NGW F W A++G T+VCLRK DA + + H V H C APIV +LL ++P ++
Sbjct: 241 NGWCFPWTLAMLGGTHVCLRKVDAKLILEAMADHQVDHYCAAPIVHSLLINAPAELRVGL 300
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
VR L AG+ PPA ++ +GF ++H YG TE+ G +P W E+A L
Sbjct: 301 GKVRGLVAGAAPPAAMIEGMARIGFDLTHVYGLTEVYGPAAVAVQRPSWASASISEQARL 360
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
RQGVR + ++DPE+ V+ DG GEI+ RG +M GYLK+P AT+ G
Sbjct: 361 NGRQGVRYALQEGMTVMDPESMAEVRADGAHMGEIMFRGNIVMKGYLKNPGATAASFAGG 420
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+ ++ PD Y++IKDRSKD+IISGGENISS E+E LY HP V AVV +PDP
Sbjct: 421 WFHTGDLAVIEPDRYVKIKDRSKDIIISGGENISSIEVEDALYRHPAVTACAVVAKPDPK 480
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P A+V L G T +++I +C++ + Y VP+ + F + +PKT+TGK+QK
Sbjct: 481 WGETPLAYVELALGA-----RVTAQELIAHCKSLLAGYKVPREIRF-EAIPKTSTGKIQK 534
Query: 542 YVLGDIANS 550
+ L + A S
Sbjct: 535 FQLRERAKS 543
>gi|331697768|ref|YP_004334007.1| o-succinylbenzoate--CoA ligase [Pseudonocardia dioxanivorans
CB1190]
gi|326952457|gb|AEA26154.1| o-succinylbenzoate--CoA ligase [Pseudonocardia dioxanivorans
CB1190]
Length = 524
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/539 (41%), Positives = 319/539 (59%), Gaps = 34/539 (6%)
Query: 13 PLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAP 72
PLTP+ +++RAA A D ++I + T+ + + RC +LA L+ + G V+ +AP
Sbjct: 8 PLTPVSYLDRAAAAHGDRVAVIDGELRLTYREFHDRCRRLAGGLAP--LAGGRPVAFLAP 65
Query: 73 NIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLF 132
N + E ++ VP +G+ INTRL A ++ IL+HS + ++ D + L+ + ++
Sbjct: 66 NTHVLLESNYGVPWAGSPLVAINTRLSAGEVAYILEHSGAAVLVHDPVFDELVDDALA-- 123
Query: 133 PPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPM 192
+ S ++ P RI + YE +LA P V P + +
Sbjct: 124 ---------------RLAGSGTAAPARIRAGE---EYEALLAGASPLA--VTPDDERALL 163
Query: 193 VLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAA 252
+NYT GTT PKGV+ ++ ++ A+ + + +V LWTLPMFH NGW F W
Sbjct: 164 SINYTSGTTGRPKGVMYHHRGAYLQALAMVGHTGMSPSTVHLWTLPMFHCNGWCFPWAVT 223
Query: 253 VVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL---DRPVRILTA 309
T+VCL K D V+ LIR+ GVTH+ GAP VL++L+ + +A + DR VRI T
Sbjct: 224 AAAGTHVCLDKVDPARVWQLIREEGVTHLNGAPTVLSMLAYAEQAGEGVPGDRVVRIATG 283
Query: 310 GSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRT 369
G+PP +L R LGF V+H YG TE G + C W+P+WN L A E+A LKARQGV
Sbjct: 284 GAPPSPAILRRMAGLGFDVTHLYGLTETFGPAMICDWRPEWNGLDAEEQARLKARQGVGN 343
Query: 370 IGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVG 429
+ IVD + G + DG + G+I +RG ++MLGY KDPEAT+ DG + TGD+G
Sbjct: 344 MISCTARIVD-DNGADLPADGTSVGQIALRGNNVMLGYFKDPEATAAAAPDGWFRTGDLG 402
Query: 430 MMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAF 489
+MHPDGY+E++DRSKDVIISGGENI+S E+E + HP V E AV+ PD W E+P A+
Sbjct: 403 VMHPDGYVELRDRSKDVIISGGENIASVEVEQAVAEHPAVLEVAVIAVPDERWGEVPAAY 462
Query: 490 VSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIA 548
V+L G TE++II++ + R+ R+ PKTVVF ELPKT+TGK+QK+VL + A
Sbjct: 463 VTLHAGAS-----VTEQEIIEHVKGRLARFKAPKTVVF-GELPKTSTGKIQKFVLREKA 515
>gi|407276714|ref|ZP_11105184.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus sp. P14]
Length = 547
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/541 (39%), Positives = 310/541 (57%), Gaps = 23/541 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+PL F+ER+++ D +II+ D YT++Q + A L S I PG V+
Sbjct: 17 ANHTPLSPLRFLERSSSVFPDRTAIIHGDRRYTYAQFADEAQRFARVLRSR-IQPGDRVA 75
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+APN+P + HFAVP++G + +N+RL + IL H+E+ L+FVD + V
Sbjct: 76 FLAPNVPELLIAHFAVPLAGGVLIALNSRLAGPELEYILGHAEASLLFVDSEFVGSVAGV 135
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD-----PQFSWV 183
P +T+ E+ S+ P P +P Y+ LA D P V
Sbjct: 136 ADSVPS---------LTEVVEVPDSTVPYPDVPAGIVTARYDEFLAAADGLDDTPLHWGV 186
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
+ + + LNYT GTT PKGV+ ++ ++ + ++ LWTLPMFH N
Sbjct: 187 DDEEQV--ITLNYTSGTTGKPKGVMYTHRGAYLNSFGETFHNAFDGKTQYLWTLPMFHCN 244
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW W G T++CLR A ++ I GVT++CGAP V + ++ +P+A +LDRP
Sbjct: 245 GWCTPWAVTAAGGTHICLRAVRADAIWDAIDNLGVTNLCGAPAVCSTIAEAPQAHRLDRP 304
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
+RI TAG+PP V+ + E +G V H YG TE+ G C ++ W+ PA ERA+L +
Sbjct: 305 LRITTAGAPPSPTVIAQLEKIGVTVVHVYGLTEVYGPYTICEYQDSWDDKPAEERAALLS 364
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQGV + +VD V DGQT GEIV+RG ++M GY KDPEAT+K + G +
Sbjct: 365 RQGVGMLQAENARVVDANMN-DVPADGQTMGEIVLRGNNVMAGYFKDPEATAKAFEGGWF 423
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
+TGD+G+M+PDGY+++KDR+KD+IISGGENIS+ E+E + SHP V + AVVG PD W
Sbjct: 424 HTGDLGVMYPDGYIQLKDRAKDIIISGGENISTVEVEQAIVSHPAVLDVAVVGVPDEKWG 483
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E P AFV LK T +++I Y R + Y VP+ +VF +LP+T TGK+ K+
Sbjct: 484 ERPKAFVILKKDE-----TVTAEELISYTRTLLAGYKVPREIVFPLDLPRTPTGKILKFE 538
Query: 544 L 544
L
Sbjct: 539 L 539
>gi|307150105|ref|YP_003885489.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7822]
gi|306980333|gb|ADN12214.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7822]
Length = 538
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/532 (39%), Positives = 318/532 (59%), Gaps = 22/532 (4%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTPL +ER ++IY+ T++T++Q +R QLA L G+ G V+ + PN
Sbjct: 13 LTPLSLLERTHKVYPHKTALIYDSTSWTYAQFAQRVNQLAHRLRQEGLQKGDRVAFLCPN 72
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
IP M E HF VP++G I IN RL + I IL HS +K +FVD ++ + ++ S
Sbjct: 73 IPPMLEAHFGVPLAGGILVCINIRLSPQEILYILNHSGAKFLFVDTEWTNNIKQIQSQL- 131
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMV 193
K++ I+D + ++ + Y+ L K + + +++ +
Sbjct: 132 --ETVEKIIHISDQENLAPLEG-----------EEYQGFLDKANSKSVPWLISDEMETIS 178
Query: 194 LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAV 253
+NYT GTT PKGV+ ++ ++ ++ +++ + +SV LWTLPMFH NGW F W
Sbjct: 179 INYTSGTTGKPKGVMYSHRGAYLNSLGEILETRLTPESVYLWTLPMFHCNGWCFPWAVTA 238
Query: 254 VGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVL-NLLSSSPEAKQLDRPVRILTAGSP 312
+GAT++CLRKF+A ++ LI + V+H+C APIVL +LL+ + ++L+ P+RI TAG+P
Sbjct: 239 IGATHLCLRKFNAALIWQLIHEQKVSHLCAAPIVLISLLNDANCPQKLEVPLRITTAGAP 298
Query: 313 PPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGL 372
P ++ + ++G ++H YG TE+ G C +P+W +L ERA ARQGV IG
Sbjct: 299 PSPTLIEKITAIGAKITHVYGLTEVYGPYSVCEEQPQWQELNLPERAKRLARQGVPYIGA 358
Query: 373 TEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMH 432
+ +VD E V DG+T GE++MRG +M GY DP+AT G +++GD+G+M+
Sbjct: 359 EGLRVVD-EQMQDVPADGETIGEVIMRGNMVMKGYYNDPQATENAFSGGWFHSGDIGVMY 417
Query: 433 PDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSL 492
PDGY+E++DR KD+II+GGE +SS E+E LY+H V E AV+G P W E P AFV+L
Sbjct: 418 PDGYMELRDRIKDIIITGGETVSSIEVEQCLYAHEGVLECAVIGVPHEKWGETPKAFVTL 477
Query: 493 KTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
K TE+D+I++CR++I Y P + FI LPKT+TGK+QKY+L
Sbjct: 478 KE-----DFTVTEQDLIEFCRSKIAHYKCPTAIEFI-VLPKTSTGKIQKYLL 523
>gi|254463457|ref|ZP_05076873.1| AMP-dependent synthetase and ligase [Rhodobacterales bacterium
HTCC2083]
gi|206680046|gb|EDZ44533.1| AMP-dependent synthetase and ligase [Rhodobacteraceae bacterium
HTCC2083]
Length = 541
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/550 (39%), Positives = 315/550 (57%), Gaps = 21/550 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L AN LTPL + RAA +++Y D +++Q + RC +LAS L+ G+
Sbjct: 10 LDKRDANYRALTPLSHLRRAAKVFPKKTALVYGDFRASYTQYHDRCTRLASGLAQLGVTS 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+ + PNIPA E HF +P GA+ NTINTRLD TI+ I H E+K+ VD
Sbjct: 70 GDVVATLLPNIPAQAEAHFGIPACGAVLNTINTRLDKGTIAYIFDHGEAKVALVD----- 124
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ F P + + +D I P + TY+ +L GD F W+
Sbjct: 125 ------TQFLPSVEAAIAEMESDGPLIIEVPDAAADYPASGRYQTYDALLESGDAAFEWI 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + + LNYT GTT PKGVV ++ +++ + +++ W + V L +P+FH N
Sbjct: 179 MPADEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVVSWQLTLAPVYLTIVPLFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAKQ-LD 301
GW+ TW ++G T VC R A V+ I GVTH GAPIVLN L++SSPE ++ D
Sbjct: 239 GWNHTWMMPMLGGTIVCCRDVTAKAVYNAIADEGVTHFGGAPIVLNTLVNSSPEERRVFD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPK-WNKLPARERAS 360
V + TAG+PP L E++GF ++ YG TE G C W + W+ L R++
Sbjct: 299 HTVEVFTAGAPPAPATLAAIETMGFHITQVYGLTETYGHVTECLWDGETWDALDQSSRSA 358
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
+KARQGV + ++ ++DP+ V DG +GEI++RG S+M GYLK+P AT +
Sbjct: 359 IKARQGVAMPMMDDITVLDPDMN-QVAMDGAHQGEIMIRGNSVMKGYLKNPSATDEAFAG 417
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G +++GD+ + HPD +++I DR+KD+IISGGENISS E+E L +H V+ AVV +PD
Sbjct: 418 GYFHSGDLAVQHPDTHIQIADRAKDIIISGGENISSVEVEGTLMAHSAVSLCAVVAKPDD 477
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+PCAFV L G + +E ++I Y R + + PK V+F ELPKT+TGK+Q
Sbjct: 478 KWGEVPCAFVELLPGAE-----VSEAELIAYARETLAGFKAPKAVIF-QELPKTSTGKIQ 531
Query: 541 KYVLGDIANS 550
K+ L + +S
Sbjct: 532 KFELRNALSS 541
>gi|452961403|gb|EME66705.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus ruber BKS
20-38]
Length = 551
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/541 (39%), Positives = 310/541 (57%), Gaps = 23/541 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+PL F+ER+++ D +II+ D YT++Q + A L S I PG V+
Sbjct: 21 ANHTPLSPLRFLERSSSVFPDRTAIIHGDRRYTYAQFADEAQRFARVLRSR-IQPGDRVA 79
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+APN+P + HFAVP++G + +N+RL + IL H+E+ L+FVD + V
Sbjct: 80 FLAPNVPELLIAHFAVPLAGGVLIALNSRLAGPELEYILGHAEASLLFVDSEFVGSVAGV 139
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD-----PQFSWV 183
P +T+ E+ S+ P P +P Y+ LA D P V
Sbjct: 140 ADSVPS---------LTEVVEVPDSTVPYPDVPAGIVTARYDEFLAAADGLDGTPLHWGV 190
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
+ + + LNYT GTT PKGV+ ++ ++ + ++ LWTLPMFH N
Sbjct: 191 DDEEQV--ITLNYTSGTTGKPKGVMYTHRGAYLNSFGETFHNGFDGKTQYLWTLPMFHCN 248
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW W G T++CLR A ++ + GVT++CGAP V + ++ +P+A +LDRP
Sbjct: 249 GWCTPWAVTAAGGTHICLRAVRADAIWDAVDNLGVTNLCGAPAVCSTIAEAPQAHRLDRP 308
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
+RI TAG+PP V+ + E +G V H YG TE+ G C ++ W+ PA ERA+L +
Sbjct: 309 LRITTAGAPPSPTVIAQLEKIGVTVVHVYGLTEVYGPYTICEYQDSWDDKPAEERAALLS 368
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQGV + +VD V DGQT GEIV+RG ++M GY KDPEAT+K + G +
Sbjct: 369 RQGVGMLQAENARVVDANMN-DVPADGQTMGEIVLRGNNVMAGYFKDPEATAKAFEGGWF 427
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
+TGD+G+M+PDGY+++KDR+KD+IISGGENIS+ E+E + SHP V + AVVG PD W
Sbjct: 428 HTGDLGVMYPDGYIQLKDRAKDIIISGGENISTVEVEQAIVSHPAVLDVAVVGVPDEKWG 487
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E P AFV LK T +++I Y R + Y VP+ +VF +LP+T TGK+ K+
Sbjct: 488 ERPKAFVILKKDE-----TVTAEELISYTRTLLAGYKVPREIVFPLDLPRTPTGKILKFE 542
Query: 544 L 544
L
Sbjct: 543 L 543
>gi|224151318|ref|XP_002337088.1| predicted protein [Populus trichocarpa]
gi|222837992|gb|EEE76357.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/482 (42%), Positives = 301/482 (62%), Gaps = 15/482 (3%)
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V +APN+PA+YELHF VPM+GA+ + +NTRLDA T+++ L+ +KL+FVD+ + + L
Sbjct: 28 VVALAPNVPALYELHFGVPMAGAVLSALNTRLDASTLALTLEQLNAKLIFVDYQFNDVAL 87
Query: 127 EVVSLFPPHS-KTPKLVLITD-DKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
+ + L S K P LV I + DK S+SS + D Y +L G F+ +R
Sbjct: 88 KALDLLSLKSVKPPHLVGIPECDK---STSSMDCKNISCDL--DYNGLLEMGRDDFTIIR 142
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
P + DP+ +NYT G+T PKGV+ ++A ++ ++ + + + + V LWT+ MF NG
Sbjct: 143 PNKECDPISVNYTSGSTGKPKGVIYSHRAAYLNSLAEIFRFDMRQMPVFLWTVDMFRCNG 202
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP- 303
W TW A +GATN+CLR A +F I H VTH CG P +LN ++++P Q P
Sbjct: 203 WCLTWAMAALGATNICLRNVSAEVIFDSISLHKVTHFCGPPAILNTIANAPAGNQNPLPF 262
Query: 304 -VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
V ++ AG P + +L + E LGF V HGYG TE G + WKP+ + E+ ++
Sbjct: 263 NVNVIIAGPFPYSEILTKVEGLGFNVYHGYGMTEALGPAIVRPWKPELDSTFENEQEKIR 322
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
R+G+ + + VD+ DP T SV RDG+T GE++ R LM GYLK+ E T + + G
Sbjct: 323 NREGLHNLLIEGVDVKDPNTMKSVPRDGKTIGEVMFRSNILMSGYLKNSEVTQEAFRGGW 382
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
Y+TGD+G+ H +GY+++KDR KD+IISGGE IS+ E+E+VL SHP V+EAAVVG+PD
Sbjct: 383 YHTGDLGVRHQNGYIQMKDRGKDIIISGGEAISTLEVEAVLLSHPKVSEAAVVGQPDAIL 442
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E+PCAFV +K G + + ++I +C R+P +M+PK++VF D LP +GKVQK+
Sbjct: 443 NEVPCAFVKVKEGFGA-----SAEEITNFCGNRLPDHMIPKSIVFGD-LPVNFSGKVQKF 496
Query: 543 VL 544
+
Sbjct: 497 AI 498
>gi|375106872|ref|ZP_09753133.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Burkholderiales bacterium JOSHI_001]
gi|374667603|gb|EHR72388.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Burkholderiales bacterium JOSHI_001]
Length = 552
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/555 (38%), Positives = 316/555 (56%), Gaps = 19/555 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN L+P+ F+ER+A D P+II+ W R +LA++L + G+
Sbjct: 8 LSKTPANFVALSPVSFVERSAEVFPDRPAIIHGARRCNWKTLRDRSARLAAALKALGVGR 67
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VSV+ PN P M E H+AVP A+ NT+NTRLDA ++ + H E++++ D +
Sbjct: 68 GSTVSVMLPNTPEMVEAHYAVPALNAVLNTLNTRLDAALLAWQMNHCEAQVLITDREFAP 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L+ + L +V+ D E + P R+ + YE +LA +P
Sbjct: 128 LMKSALQLLKSEHGRELVVIDVCDSEYTG---PGDRLGAHE----YEALLAAHEPLARLD 180
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
+ D + ++YT GTT PKGVV ++ ++ AV + W +P V LWTLPMFH N
Sbjct: 181 GAADEWDAIAVSYTSGTTGDPKGVVTHHRGAYLNAVCNAATWTMPHFPVYLWTLPMFHCN 240
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE------A 297
GW F W A++G T+VCLR+ +A + +R+H V H C APIV +L+ ++P+ +
Sbjct: 241 GWCFPWTVAMLGGTHVCLRRVEAAAILGAMREHKVDHYCAAPIVHSLIFNAPDEMRAGLS 300
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
+ + VR + AG+ PPA ++ +GF ++H YG TE+ G P W++ E
Sbjct: 301 GEGRQQVRGMVAGAAPPASMIEGMARIGFDITHVYGLTEVYGPASVAVKHPHWSEQSLSE 360
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+ L RQGVR + + ++DPET + DGQT GEI+ RG +M GYLK+P AT K
Sbjct: 361 QTRLNGRQGVRYVLQEGMTVLDPETLADIPADGQTMGEIMFRGNIVMKGYLKNPNATHKA 420
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
+ G ++TGD+ +M D Y++IKDRSKDVIISGGENISS E+E LY HP V AVV +
Sbjct: 421 FEGGWFHTGDLAVMEADRYVKIKDRSKDVIISGGENISSIEVEDALYRHPAVLACAVVAK 480
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD W E P A+V +K G T D++ +C+ + Y VP+ + F +E+PKT+TG
Sbjct: 481 PDAKWGETPVAYVEIKAGAQ-----VTAADLVAHCKTLLAGYKVPREIRF-EEIPKTSTG 534
Query: 538 KVQKYVLGDIANSMS 552
K+QK+ L + A S S
Sbjct: 535 KIQKFQLRERAKSSS 549
>gi|77462142|ref|YP_351646.1| AMP-binding protein [Rhodobacter sphaeroides 2.4.1]
gi|77386560|gb|ABA77745.1| AMP-binding protein [Rhodobacter sphaeroides 2.4.1]
Length = 549
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 231/548 (42%), Positives = 324/548 (59%), Gaps = 20/548 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L+ AN LTPL ++RAA D +++ T+ + + R +LAS+L+ GI
Sbjct: 10 LEKCAANYAALTPLSHLKRAAEVHTDRTALVNGSIRLTYGEYHARVSRLASALAGMGIQS 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+ + PNI A E HF VP GAI N INTRLD T+S IL+H +KL+ D ++
Sbjct: 70 GDVVATLLPNIAAHAEAHFGVPACGAILNAINTRLDLDTVSYILEHGGAKLLLCD--TAF 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L L + K P LV + D +E S P+ V YE+++ +G+P WV
Sbjct: 128 LKLAKDACARLEGKAPILVEVCD-REAGFS--------PSGEVLEYEDLMDRGNPWAPWV 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + + LNYT GTT PKGVV ++ ++ + I W + V L +P+FH N
Sbjct: 179 MPEDEWESIALNYTSGTTGRPKGVVYHHRGAYLSTYGNAIAWRMQLYPVYLTIVPLFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAKQ-LD 301
GW TW ++G T VC R A ++A I GVTH GAPIVLN L++++PE ++ D
Sbjct: 239 GWCHTWMVPMLGGTVVCCRDITATAIYAAIADEGVTHFGGAPIVLNTLINAAPEDRRSFD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+ V + TAG+PPPA L E LGF V+ YG TE+ G C WKP+W++ ER++L
Sbjct: 299 QVVEVFTAGAPPPAATLAAIEPLGFNVTQVYGLTEVYGPATECIWKPEWDETAGEERSAL 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KAR GV L ++ D G + RD GEI MRG +M GY K+PEAT++ +DG
Sbjct: 359 KARTGVAMATLEGAEVHDTH-GQPIPRDTVHLGEIAMRGNMVMKGYYKNPEATAEAFRDG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GD+ HPDGY++I DR+KD+IISGGEN+SS E+E V+ HP V+ AVV +PD
Sbjct: 418 WFRSGDIAFQHPDGYIKITDRAKDIIISGGENVSSVEVEGVIAHHPAVSLCAVVAKPDER 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK G + TE++II + R R+ + PK V+F ELPKT+TGK+QK
Sbjct: 478 WGEVPCAFVELKRGRQA-----TEEEIIAFARERLAGFKTPKQVIFC-ELPKTSTGKIQK 531
Query: 542 YVLGDIAN 549
+ L +A
Sbjct: 532 FELRAVAK 539
>gi|421501879|ref|ZP_15948835.1| acyl-CoA synthetase, partial [Pseudomonas mendocina DLHK]
gi|400347163|gb|EJO95517.1| acyl-CoA synthetase, partial [Pseudomonas mendocina DLHK]
Length = 446
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/445 (44%), Positives = 273/445 (61%), Gaps = 14/445 (3%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
N L+PL FIER A P++++ W++TY RC +LAS+L+ GI G V+V
Sbjct: 14 NHVALSPLSFIERTAAVYPHYPAVVHGSIRRNWAETYARCRRLASALAGRGIGQGDTVAV 73
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+ PNIPAM E HF VPM GA+ NT+N RLDA I+ +L+H E+K+V D ++ +
Sbjct: 74 MLPNIPAMLEAHFGVPMIGAVLNTLNVRLDAEAIAFMLQHGEAKVVIADREFHDVIHAAI 133
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDL 189
+ P LV+ DD E + + D YE LA+GDP+F+W P +
Sbjct: 134 GML----DHPPLVIDVDDPEYGEGQA----VSELD----YEAFLAEGDPEFAWQWPTDEW 181
Query: 190 DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249
+ LNYT GTT PKGVV ++ F+ A+ + + W + V LWTLPMFH NGW + W
Sbjct: 182 QAISLNYTSGTTGNPKGVVYHHRGAFLNAMGNQMTWAMGNHPVYLWTLPMFHCNGWCYPW 241
Query: 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP-EAKQ-LDRPVRIL 307
+ +V LR+ D + LIR VTH+CGAPIVLN L + P EAK +D PV+ +
Sbjct: 242 TVTALAGVHVFLRRVDPAKILTLIRDEQVTHLCGAPIVLNALVNMPAEAKAAIDHPVKAM 301
Query: 308 TAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AG+ PPA V+ E +G V+H YG TE+ G CAW +W++LP ERA++KARQGV
Sbjct: 302 VAGAAPPAKVIGAVEEMGIHVTHVYGLTEVYGPVTLCAWHAEWDELPLEERATIKARQGV 361
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGD 427
R L V + DP+T V RDGQT GEI MRG ++M GYLK+P AT++ + G ++TGD
Sbjct: 362 RYPTLEGVIVADPKTLEPVPRDGQTIGEIFMRGNTVMKGYLKNPSATAEAFEGGWFHTGD 421
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGE 452
+G+ H DGY+EI+DR KD+IISGGE
Sbjct: 422 LGVCHADGYVEIRDRLKDIIISGGE 446
>gi|254438630|ref|ZP_05052124.1| AMP-binding enzyme, putative [Octadecabacter antarcticus 307]
gi|198254076|gb|EDY78390.1| AMP-binding enzyme, putative [Octadecabacter antarcticus 307]
Length = 541
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 227/543 (41%), Positives = 321/543 (59%), Gaps = 20/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L PAN PLTPL + RAA D +++Y D T++ + R QLAS+L G+ P
Sbjct: 12 LDKTPANYIPLTPLSHLARAAKVFPDREALVYGDMRLTYTNYHARVSQLASALQMAGVVP 71
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+ + PNIPA E HF VP +GA+ NTIN RLD TI+ I H E+K+V VD
Sbjct: 72 GDVVATLLPNIPAQAEAHFGVPAAGAVLNTINIRLDVDTIAYIFDHGEAKVVLVDSQFLP 131
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ ++ V + P +V E+ + + P I + +D YE LA GDP F+W+
Sbjct: 132 VCMKAVEAM--EGEAPLVV------EVPDAIAGVPEI--GEQID-YETFLAAGDPNFAWI 180
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P + + + LNYT GTT PKGVV ++ +++ + + + W + + L +P+FH N
Sbjct: 181 MPDDEWESLALNYTSGTTGRPKGVVCHHRGAYLMTMGTPVTWRMTLHPIFLTIVPLFHCN 240
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL-SSSPEAKQ-LD 301
GW+ TW ++G T VC R A ++A I GVTH GAPIVLNLL ++ PE ++ D
Sbjct: 241 GWNHTWMIPMLGGTVVCCRDISAAAIYAAIADEGVTHFGGAPIVLNLLVNAKPEDRRDFD 300
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
V + TAG+PP L LGF V YG TE G C W W+ LP +++++
Sbjct: 301 HTVEVFTAGAPPAPATLAAIGDLGFNVQQVYGLTETYGHVTECLWNNDWDSLPQDKQSAI 360
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KARQGV + ++ ++ +T V DG+++GEIV+RG S+M GYLK+P AT+K K G
Sbjct: 361 KARQGVAFPQMEDITVMS-DTMEQVTMDGKSQGEIVIRGNSVMKGYLKNPGATAKAFKGG 419
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++ D+ + +PDG ++I DR+KD+IISGGENISS E+ESVL HP V AVV PD
Sbjct: 420 YFHSEDLAVQYPDGSMQIADRAKDIIISGGENISSVEVESVLMGHPDVMLCAVVAMPDDK 479
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK G + +I + + R+ + PK VVF ELPKT+TGK+QK
Sbjct: 480 WGEVPCAFVELKVGH-----VGDADALIAFTKQRLAGFKCPKKVVF-GELPKTSTGKIQK 533
Query: 542 YVL 544
+ L
Sbjct: 534 FEL 536
>gi|407799188|ref|ZP_11146082.1| AMP-dependent synthetase and ligase [Oceaniovalibus guishaninsula
JLT2003]
gi|407058830|gb|EKE44772.1| AMP-dependent synthetase and ligase [Oceaniovalibus guishaninsula
JLT2003]
Length = 541
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/543 (39%), Positives = 312/543 (57%), Gaps = 20/543 (3%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L +PAN PLTPL + RAAT ++++ D +T+++ + +LA +L+ GI P
Sbjct: 10 LDRDPANHVPLTPLSHLARAATVFPQAEALVHGDRRWTFARYHADASRLAGALAVAGIGP 69
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+ I PN+ A HF VP +GA+ N IN RLD T++ IL H ++L+ D ++
Sbjct: 70 GDVVATILPNVAAQAIAHFGVPAAGAVLNAINVRLDVDTVAYILDHGGARLILCD--TAF 127
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
+ L ++ P++V + D +++ +D ++ LA G W
Sbjct: 128 VPLAEAAIAAMDGPAPRIVEVPDPGAGHTATG--------RHID-WDAFLADGAAHHPWH 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P+ + + + LNYT GTT PKGVV ++ +++ + + + W +P ++ LL +P+FH N
Sbjct: 179 MPRDEWESIALNYTSGTTGRPKGVVYSHRGAYLMTMGTAVAWQLPPRARLLTIVPLFHCN 238
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LD 301
GW W ++G +C R A + I G TH GAPIVLNLL ++ EA + +D
Sbjct: 239 GWHHVWTMPMLGGAAICCRDITARAIHDAIADEGATHFGGAPIVLNLLVNADEADRRPMD 298
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV + TAG+PP A L E LGF V+H YG TE G C W P+W+ LP +RA+L
Sbjct: 299 HPVHVYTAGAPPAAATLAAMEGLGFRVTHVYGLTETHGHVTECPWSPEWHDLPPSQRAAL 358
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
+ARQGV + E+ ++D + G V DG +GEI MRG +M GY +D AT G
Sbjct: 359 QARQGVGMPMMEEITVLD-DVGRPVALDGTAQGEIAMRGNCVMKGYYRDDAATRAAFDGG 417
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GD+ + HPDG+++I DR+KD+IISGGEN+SS E+E VL HP V+ AVV RPD
Sbjct: 418 WFRSGDLAVRHPDGHMQIVDRAKDIIISGGENVSSVEVEGVLMHHPAVSLCAVVARPDAR 477
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E+PCAFV LK G E +I + R R+ + P +VF ELPKTATGK+QK
Sbjct: 478 WGEVPCAFVELKRGA-----TVDEAALIAFARERLAGFKTPARIVF-QELPKTATGKIQK 531
Query: 542 YVL 544
Y L
Sbjct: 532 YDL 534
>gi|440704425|ref|ZP_20885276.1| AMP-binding enzyme [Streptomyces turgidiscabies Car8]
gi|440273935|gb|ELP62605.1| AMP-binding enzyme [Streptomyces turgidiscabies Car8]
Length = 527
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/546 (42%), Positives = 315/546 (57%), Gaps = 43/546 (7%)
Query: 7 NPANSC----PLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
NPA S PL+P+ F++R+A + ++I +T+++ + RC +LA L+
Sbjct: 4 NPATSALSFEPLSPVSFLDRSAAVFPERTAVIDGRRRFTYAEFHDRCRRLAGVLAPLA-- 61
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G V+V+APN M E H VP +GA TINTRL A + IL+HSES ++ D
Sbjct: 62 NGRPVAVLAPNTHVMLEAHHGVPWAGAPLVTINTRLSATEVRYILEHSESAVLLQDPQFD 121
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPP--RIPPADFVDTYENMLAKGDPQF 180
L+ I+ +PP R P D YE +LA P
Sbjct: 122 DLV---------------------GTAIAGMHNPPVVVRAGPGDD-GAYERLLAAAVPTA 159
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+ + L + LNYT GTT PKGV+ ++ ++ A+ + + S LWTLPMF
Sbjct: 160 VLLSDEQAL--LSLNYTSGTTGRPKGVMYHHRGAYLQALAMVTHTQLSASSAYLWTLPMF 217
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA-KQ 299
H NGWSF W VG T+VCL K +A ++ I+ +TH+CGAP VL+++ ++PEA +
Sbjct: 218 HCNGWSFPWAVTAVGGTHVCLPKVEASEIWRHIQGEHITHLCGAPAVLSMVVNAPEAGRA 277
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
D +R LT G+PP +L E+L V+H YG TE G V C W P+WN L A E++
Sbjct: 278 SDGVIRFLTGGAPPSPTLLAAAEALRIDVTHLYGLTETFGPAVLCDWHPEWNGLDAAEQS 337
Query: 360 SLKARQGV-RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
L+ARQGV IGLT +VD E V DG T GEI +RG +LMLGY KD T+
Sbjct: 338 RLRARQGVANVIGLT-ARVVDGEK--DVPADGTTIGEIRLRGNNLMLGYFKDDAGTAAAA 394
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
DG + TGD+G+ HPDGY+E++DRSKDVIISGGENI+S E+E + SHP V EAAVVG P
Sbjct: 395 PDGWFRTGDLGVRHPDGYIELRDRSKDVIISGGENITSIEVEQAIASHPAVLEAAVVGAP 454
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
D W E+P A+V L+ TE+DI+ + ++RI R+ PK VVF ELP+T+TGK
Sbjct: 455 DERWGEVPVAYVVLRPDA-----FATEQDIVDHVKSRIARFKAPKRVVF-GELPRTSTGK 508
Query: 539 VQKYVL 544
+QKY+L
Sbjct: 509 IQKYLL 514
>gi|375093692|ref|ZP_09739957.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora marina XMU15]
gi|374654425|gb|EHR49258.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora marina XMU15]
Length = 539
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/537 (40%), Positives = 312/537 (58%), Gaps = 25/537 (4%)
Query: 12 CPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PLTPL F+ R+A D +I Y D T+ ++AS+L + G+ G V+ +
Sbjct: 10 TPLTPLSFLRRSAEVFADKVAIAYGDRRITYRDFAAEVTRVASALRASGVERGDRVAYLL 69
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PNIP M HFAVP++G INTRL I IL+HS +KL+ VD S+L V
Sbjct: 70 PNIPEMLVAHFAVPLAGGALVAINTRLAPAEIDYILRHSGAKLLVVD---SALHKSV--- 123
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG----DPQFSWVRPKS 187
P ++V +TD ++ + I +Y ++LA+G D W
Sbjct: 124 -PADPSVREIVTVTDPASGVAADAAVGGI-------SYADLLARGSAEPDEALPWA-VDD 174
Query: 188 DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSF 247
+ D + +NYT GTT PKGV+ ++ ++ ++ ++ +S LWTLPMFH NGW
Sbjct: 175 ERDTISINYTSGTTGRPKGVMYHHRGAYLNSLAEIVHSRHTSESRYLWTLPMFHCNGWCT 234
Query: 248 TWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRIL 307
TW +G T+VCLR DA ++ L+ G+TH+ GAP VLN +++ P+A L + V +
Sbjct: 235 TWAITAIGGTHVCLRAVDAAEIWRLLDTEGITHLNGAPTVLNTIANYPQAHPLAQEVVVT 294
Query: 308 TAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
TAG+PP V+ R +LG + H YG TE G C W+ W KL R+ L ARQGV
Sbjct: 295 TAGAPPSPTVISRMTALGAKLVHVYGLTETYGPYTVCEWQDGWAKLDVESRSRLLARQGV 354
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGD 427
+ V +VD + V RDG T GE+VMRG ++M GY D EAT K + G +++GD
Sbjct: 355 GMVVTDGVRVVDDDMN-DVPRDGATMGEVVMRGNNVMSGYFADQEATEKAFRGGWFHSGD 413
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+G+ HPDGY+E++DR+KD+I+SGGENIS+ E+E+ + SHP V E AVVG P W E P
Sbjct: 414 LGVWHPDGYIELRDRAKDIIVSGGENISTIEVEAAIDSHPAVLEVAVVGVPHDKWGERPK 473
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
A+V ++G TE++++ + R++I RY VP++V F+ ELPKT+TGK+QK+ L
Sbjct: 474 AYVVTRSGES-----VTEQELLDHVRSQIARYKVPESVEFVAELPKTSTGKIQKFQL 525
>gi|357484059|ref|XP_003612316.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
gi|355513651|gb|AES95274.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
Length = 550
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/549 (39%), Positives = 326/549 (59%), Gaps = 22/549 (4%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFG 60
D ++ + + PLTP+ F+ERAAT D SIIYND ++W +TY RCL+LAS+L + G
Sbjct: 4 DLVECSKGSHIPLTPICFLERAATVYGDKVSIIYNDHVRFSWRETYERCLKLASALVNLG 63
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSES-KLVFVDH 119
I+ G +V+ +APN PA YELHF VPM+GAI +++N +LDA T+++IL+ ES K++FVD+
Sbjct: 64 ISNGDIVATLAPNTPAHYELHFGVPMAGAIISSLNLKLDATTLALILEQLESCKIIFVDY 123
Query: 120 LSSSLLLEVVSLFPPHS-KTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP 178
+L+ + + K P +VLI D ++ IP + Y +L KG
Sbjct: 124 EFIDSVLKASKIISQRNFKPPLIVLIQDHGQLVKD------IPQDTLI--YHELLEKGQK 175
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
F P ++ DP+ +NYT G+T PKG V +++ ++ ++ ++ + V V LWT+
Sbjct: 176 DFKISMPINECDPISVNYTSGSTGIPKGAVYSHRSVYLNSLATITRFDVNPMPVFLWTVD 235
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRK-FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
MF NGW F W +G TN+CLR F A + I H VTH+CGAP +L ++++
Sbjct: 236 MFRCNGWCFIWLMPALGGTNICLRNNFSAKDIIDAIHVHKVTHLCGAPTLLEIIANCEII 295
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
+ V + AG P +L + LGF V+ GYG TE G + WK ++
Sbjct: 296 RPFSHKVSVTVAGILPSFKILNKVAELGFDVNIGYGMTETLGPVIVRKWKQNFDD--DIT 353
Query: 358 RASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+ + ++GV + EVD+ DP T SV DG+T GEI+ +G + M GYLK + + +
Sbjct: 354 KLNYVDKKGVIDFMMVEVDVKDPNTMKSVPYDGKTIGEIMFKGNTSMSGYLKSSQVSHEA 413
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
+DG Y T D+G+ P+G +KDR+KD+I S GE +SS E+E+VL +HPMV + AVVGR
Sbjct: 414 FRDGWYRTRDLGVRLPNGSFNLKDRAKDIIYSKGEFVSSLEVEAVLLNHPMVLKVAVVGR 473
Query: 478 --PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTA 535
D E PCA V LK G ++ +DII++C ++ +MVPK+VVF+D LP +
Sbjct: 474 YDDDECLVESPCAIVKLKDGCNA-----NIEDIIKFCEDQLDAHMVPKSVVFVD-LPLNS 527
Query: 536 TGKVQKYVL 544
TGKVQK+V+
Sbjct: 528 TGKVQKFVI 536
>gi|125570262|gb|EAZ11777.1| hypothetical protein OsJ_01648 [Oryza sativa Japonica Group]
Length = 620
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/486 (42%), Positives = 296/486 (60%), Gaps = 17/486 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYND------TTYTWSQTYRRCLQLASSLSSF-GI 61
AN PLTP+ F+ER A D +I+ +D + TW T RCL+LA++L+ G+
Sbjct: 36 ANHAPLTPISFLERTALVYPDRLAIVASDGSAGVAVSRTWRDTRARCLRLAAALTGLLGV 95
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
VV+V A NIPA+ ELHF VPM+GA+ T+N+RLDA +++L+HSE+K+VFVD
Sbjct: 96 QRHDVVAVFAQNIPAVCELHFGVPMAGAVICTLNSRLDAAMAAVLLRHSEAKVVFVDRAL 155
Query: 122 SSLLLEVVSLFPPH-SKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENML----AKG 176
+ + + L ++ P LVLI++ + + S P +I YE++L A
Sbjct: 156 LGVAQKALVLVAEAGARRPVLVLISELLDENERSPPDAKIKVTRVDYEYEHLLSAAAAGS 215
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
P F+ P + +P+ LNYT GTTS PKGV+ ++ ++ ++ ++I + + V LWT
Sbjct: 216 SPDFAIRWPADENEPIALNYTSGTTSRPKGVIYSHRGAYLSSLAAVIVNAMAETPVYLWT 275
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
+PMFH NGW WG A G TNVC+R+ A +F + +HGVTHM GAP VL+++ ++
Sbjct: 276 VPMFHCNGWCQVWGVAAQGGTNVCVRRVTAAAIFDSVARHGVTHMGGAPTVLSMIVNATA 335
Query: 297 AKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
++ G VL R E GF+V H YG TE G C WKP+W+ L A
Sbjct: 336 DERR-----RQPGGRRRRVTVLFRMEEQGFLVIHSYGLTETYGPATVCTWKPEWDALTAE 390
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
ERA +K+RQG+ +GL D+ DP T SV DG+T GE+++RG ++M GY KD AT++
Sbjct: 391 ERARIKSRQGLHHVGLEAADVKDPATMRSVPADGRTVGEVMLRGNTVMSGYYKDGGATAE 450
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
+ G +GD+ + DGY++I DRSKD+IISGGENIS+ E+E+ L+ HP V EAAVVG
Sbjct: 451 ALAGGWLRSGDLAVREEDGYIKILDRSKDIIISGGENISTVEVEAALFGHPAVEEAAVVG 510
Query: 477 RPDPFW 482
RPD +W
Sbjct: 511 RPDEYW 516
>gi|108804872|ref|YP_644809.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
gi|108766115|gb|ABG04997.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
Length = 523
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/535 (40%), Positives = 307/535 (57%), Gaps = 38/535 (7%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTP+ F+ R+A + +++Y D YT+ + RR +LAS L G+ G V+ I PN
Sbjct: 10 LTPVSFLRRSAFMFPEKTAVVYGDRRYTYREFERRVDRLASGLREAGLRGGDRVAFICPN 69
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----HLSSSLLLEVV 129
P + E HFAVP +G + INTRL + IL+HS ++ VF D HL+S + V
Sbjct: 70 TPPLLEAHFAVPAAGGVLVAINTRLSPEEVGYILEHSGARFVFADAGLEHLASGAEAQRV 129
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDL 189
+ DD D YE+ LA P+ K +
Sbjct: 130 RI--------------DDTGAEG--------------DPYEDFLAAAPPEPPESPLKDEE 161
Query: 190 DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249
+ + LNYT GTT PKGV+ ++ ++ A+ ++I+ + ++ LWTLPMFH NGW++ W
Sbjct: 162 ETISLNYTSGTTGRPKGVMYSHRGAYLCALGNVIEAGMGYETRYLWTLPMFHCNGWTYPW 221
Query: 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTA 309
V T+VCLR+ + ++ L ++ G+TH C AP V + + A +L RPVR + A
Sbjct: 222 AVTAVAGTHVCLRRVEPGRIWRLFKEEGITHYCAAPTVQVGIINDEAAHRLPRPVRAMIA 281
Query: 310 GSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRT 369
G+PP ++ L H YG TE G + A + +W +LPA ERA L ARQG
Sbjct: 282 GAPPSPTLIAGLGDLNIDPVHIYGLTETYGPITTSAPRKEWEELPAEERARLLARQGNAY 341
Query: 370 IGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVG 429
+ V +VD E V RDG+T GEIVMRG +M GY ++ EAT + + G +++GDV
Sbjct: 342 VTADIVRVVD-ENLQDVPRDGETMGEIVMRGNMVMKGYFENEEATREAFEGGWFHSGDVA 400
Query: 430 MMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAF 489
+ HPDGY+EI+DR KD+IISGGENIS+ E+E + SHP V E AVV PD W E P AF
Sbjct: 401 VWHPDGYVEIRDRRKDIIISGGENISTIEVEQAVVSHPAVLECAVVAIPDEKWGERPKAF 460
Query: 490 VSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
V+LK G ++ TE++II++C+A+I R+ P V F++ELPKT+TGKVQK+VL
Sbjct: 461 VTLKKGHNA-----TEEEIIEHCKAKIARFKAPSAVEFVEELPKTSTGKVQKFVL 510
>gi|148654773|ref|YP_001274978.1| AMP-dependent synthetase and ligase [Roseiflexus sp. RS-1]
gi|148566883|gb|ABQ89028.1| AMP-dependent synthetase and ligase [Roseiflexus sp. RS-1]
Length = 560
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 226/546 (41%), Positives = 313/546 (57%), Gaps = 17/546 (3%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+R P + L+PL F+ER + I+ D T++ R +LA++L G+
Sbjct: 16 ERWTGLPVHRSILSPLMFLERTLRVFPEKTGIVDGDRRLTYAAFGARVYRLANALRRQGV 75
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
PG V+++ N M E HF VP GAI IN RL + I+ IL HS ++ + VD
Sbjct: 76 EPGDRVAILCRNASEMLEAHFGVPQIGAILVPINVRLTSDEIAYILDHSGARALIVDAEL 135
Query: 122 SSLLLEVVSLFPPHSKTPKL-VLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
+ L+ P ++ L V++ D + SP VD YE L+ P+
Sbjct: 136 TPLIA------PIRTQLNALEVIVVADVSRRHAGSPTDASTLPGSVD-YEEFLSDSSPEP 188
Query: 181 SWVRPKSDLD-PMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
S V P D D P+ +NYT GTT PKGV+ ++ ++ A+ +I+ + S LWTLPM
Sbjct: 189 S-VYPVDDEDHPISINYTSGTTGRPKGVIYTHRGAYLNALGEIIEVGLRPDSTYLWTLPM 247
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVL-NLLSSSPEAK 298
FH NGW F W +GAT+VCL K +A V +LI V+H CGAP VL L P
Sbjct: 248 FHCNGWCFPWAVTGIGATHVCLPKVEAARVLSLIEAEQVSHFCGAPTVLITLAMECPPGF 307
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
+ R + ++TA +PPP ++ R E LG + H YG TE G + C WK +W+ L ER
Sbjct: 308 RFARRLTVVTAAAPPPPAIIQRMEELGATIIHVYGLTETYGPHTVCEWKREWDGLSLEER 367
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A LKARQGV + E+ +VD E V DG T GE+VMRG ++M GY +D EAT +
Sbjct: 368 ARLKARQGVGYLHAPELRVVDEEM-RDVPADGATLGEVVMRGNNVMKGYYRDEEATRQAF 426
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
+ G +++GD+G+MHPDGY+E++DR KD+IISGGENIS+ EIE VLY HP+V EA V+G P
Sbjct: 427 RGGWFHSGDLGVMHPDGYIELRDRKKDIIISGGENISTIEIERVLYQHPLVLEATVIGVP 486
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
D W E P AF+ LK G T +II +CR R+ + PK V F++ LPKT+TGK
Sbjct: 487 DIRWGETPKAFIILKPGAQ-----MTADEIIAFCRERLAHFKCPKFVEFVESLPKTSTGK 541
Query: 539 VQKYVL 544
+QK+VL
Sbjct: 542 IQKFVL 547
>gi|325001401|ref|ZP_08122513.1| long-chain-fatty-acid--CoA ligase [Pseudonocardia sp. P1]
Length = 540
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/538 (39%), Positives = 313/538 (58%), Gaps = 26/538 (4%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
+ PLTPL F+ R+A D +I+Y D +T+++ ++A++L + G+ PG V+ +
Sbjct: 10 TTPLTPLAFLGRSADVFPDTTAIVYGDRRHTYAEFAAEATRVANALEASGVEPGDRVAYL 69
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVS 130
PN+P M HFAVP++GA+ INTRL + IL HS +K++ VD ++L E V
Sbjct: 70 LPNVPEMLVAHFAVPLAGAVLVAINTRLSTEEVRYILDHSGAKVLVVD----AVLYETVR 125
Query: 131 LFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT---YENMLAKG-DPQFSWVRPK 186
P + +EI + + P P D V + Y ++LA+G D W
Sbjct: 126 --------PVAGELETVREIVTVTDPAA---PGDGVGSGLSYADLLARGSDTPRPWA-VD 173
Query: 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
+ + +NYT GTT PKGV ++ ++ + ++ SV LWTLPMFH NGW
Sbjct: 174 DERGTISINYTSGTTGHPKGVEYHHRGAYLNSFGEIVHSTHTPDSVYLWTLPMFHCNGWC 233
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRI 306
W +G T+VCLR+ ++ LI +HGVTH+ GAP V+ + ++PEA LD P+ I
Sbjct: 234 TPWAVTAIGGTHVCLREVRGDVIWGLISEHGVTHLNGAPTVVTTIMNAPEAVTLDYPLVI 293
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
TAG+PP +L+ E +GF + H YG TE G ++ W+ L ERA L+ARQG
Sbjct: 294 TTAGAPPSPTTILQMERMGFRIVHVYGLTETYGPYSVNQYQRAWDGLDGEERARLQARQG 353
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
V + + +VD E V DG T GEIVMRG ++M GY D E T++ G +++G
Sbjct: 354 VGMVCADRLRVVD-EQMADVPADGATMGEIVMRGNNVMKGYHLDDEKTAEAFAGGWFHSG 412
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+G++HPDGY+E++DR+KDV+ISGGENIS+ E+E + SH V EAAVVG PD W E+
Sbjct: 413 DLGVVHPDGYVELRDRAKDVVISGGENISTVEVEQAIVSHEAVLEAAVVGVPDERWGEVC 472
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
AF L+ G + +++I + + RI RY PK V ++ELPKT+TGKVQK+ L
Sbjct: 473 KAFAVLRPGRAA-----EPQELIDHVKTRIARYKAPKYVEVVEELPKTSTGKVQKFEL 525
>gi|260904539|ref|ZP_05912861.1| long-chain-fatty-acid--CoA ligase [Brevibacterium linens BL2]
Length = 548
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/540 (38%), Positives = 311/540 (57%), Gaps = 16/540 (2%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
+ LTPL F+ R+A D +++YND ++ + A +L + GI PG V+ +
Sbjct: 5 NTELTPLSFLRRSADVFPDKRAVVYNDQELSYREFAAAVETRAHALRAAGIQPGDRVAYL 64
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVS 130
PN+P FAVP++GA+ INTRL A + I HS++KL+ +D + L V+
Sbjct: 65 MPNLPEALMAQFAVPLAGAVLVPINTRLAAEEVRYICNHSQAKLLVID----TQLWPSVA 120
Query: 131 LFPPHSKTPKLVLITDDKEISSSSS---PPPRIPPADFVDTYENMLAKGDPQFSWVRPKS 187
T + ++ +D I++S+ P P +D + + SW R +
Sbjct: 121 PVLDGLDTVEAIVDVEDTTIAASAEVARPDFAAPSVTSLDEFLAGAEADTDELSW-RVED 179
Query: 188 DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSF 247
+ + +NYT GTT PKGV+ ++ ++ A+ +I ++SV LWTLPMFH NGW
Sbjct: 180 ERATLSINYTSGTTGRPKGVMYSHRGAYLNALGEIIHSDHDEKSVYLWTLPMFHCNGWCT 239
Query: 248 TWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRIL 307
W A G T VCLR+ ++ LI +H VTH+ GAP V++ + ++ +A LDR V
Sbjct: 240 GWALAAAGGTQVCLREVRGDVIWDLIDRHEVTHLNGAPTVMSTVINAEQAHSLDRAVTAT 299
Query: 308 TAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AG+ P ++ E+L F + H YG TE G C W+ W+ L + RA L+ARQGV
Sbjct: 300 MAGAAPSPTLIWEMEALNFQIVHVYGLTESYGPYTVCEWQDSWDSLDDKSRARLRARQGV 359
Query: 368 RTIGLTEVDIVDPETG---LSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYY 424
+ + IV E+G + V DGQT GEIVMRG ++M GY +D +AT+K + G ++
Sbjct: 360 GMVQADQARIVALESGDELIDVPADGQTIGEIVMRGNNVMKGYFRDEDATAKAFQGGWFH 419
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
+GD+G+MH DGY+E++DRSKD+I+SGGENIS+ EIE + SHP V E AV+G PD W E
Sbjct: 420 SGDLGVMHEDGYIELRDRSKDIIVSGGENISTVEIEQAISSHPAVLEVAVIGVPDDKWGE 479
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P AF+ ++ G+ TE ++I + R +I +Y P+ V ++ LPKT+TGK+QK+ L
Sbjct: 480 RPKAFIIVREGS-----AVTEAEVIDHVRTQIAKYKAPREVEIVEALPKTSTGKIQKFEL 534
>gi|385676053|ref|ZP_10049981.1| o-succinylbenzoate--CoA ligase [Amycolatopsis sp. ATCC 39116]
Length = 517
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/545 (40%), Positives = 315/545 (57%), Gaps = 35/545 (6%)
Query: 13 PLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAP 72
PL+P+ F++RA A D ++ + +T+++ RC +LA +L+ V+V+AP
Sbjct: 8 PLSPVSFLDRAEAAHGDRVGVVDGERRFTYAEFADRCRRLAGALAPLARK--RPVAVLAP 65
Query: 73 NIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLF 132
N + E +F VP +G +NTRL A I+ IL H E+ ++ D + L+ EVV
Sbjct: 66 NTHVLLEANFGVPWAGVPLVAVNTRLSAGEIAWILDHCEAAVLVHDPVFDELVAEVVDRL 125
Query: 133 PPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPM 192
P V+ ++ YE +LA P+ P+ + +
Sbjct: 126 ----GRPVEVIRAGEE--------------------YEGLLAGATPRAE--APRDERGLL 159
Query: 193 VLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAA 252
+NYT GTT PKGV+ ++ ++ A+ + + SV LWTLPMFH NGW F W
Sbjct: 160 SINYTSGTTGRPKGVMYHHRGAYLQALAMVGHTGLSPSSVHLWTLPMFHCNGWCFPWAVT 219
Query: 253 VVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSP 312
AT+VCL K + V+ LIR GVTH+ GAP VL++L+ +PEA + PVR+ T G+P
Sbjct: 220 AAAATHVCLPKVEPALVWRLIRDEGVTHLNGAPTVLSMLAYAPEAAPVAHPVRVATGGAP 279
Query: 313 PPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGL 372
P +L R LGF V+H YG TE G + C W+P+WN L +A LKARQGV +
Sbjct: 280 PSPAILRRMGELGFDVTHLYGLTETFGPIMICDWRPEWNTLDTAAQARLKARQGVGNLVS 339
Query: 373 TEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMH 432
+V + G V DG T GEI +RG ++MLGY +DP+AT++ DG + TGD+G+MH
Sbjct: 340 CRARVVTGD-GSDVPADGVTTGEIAVRGNNVMLGYYRDPDATAQAAPDGWFRTGDLGVMH 398
Query: 433 PDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSL 492
PDGY+E++DRSKDVIISGGENI+S E+E V+ HP V E AV+ PD W E+P AFV+L
Sbjct: 399 PDGYVELRDRSKDVIISGGENIASVEVEQVIADHPAVLEVAVIAVPDDHWGEVPAAFVTL 458
Query: 493 KTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMS 552
+ G + T ++I+++ R RI R+ P+ VVF LPKT+TGK+QKYVL D A +
Sbjct: 459 QEGASA-----TAEEIVEFVRGRIARFKAPRRVVF-GPLPKTSTGKIQKYVLRDQAWAGH 512
Query: 553 MSHSR 557
S R
Sbjct: 513 ASRIR 517
>gi|221636234|ref|YP_002524110.1| AMP-dependent synthetase and ligase [Thermomicrobium roseum DSM
5159]
gi|221157753|gb|ACM06871.1| AMP-dependent synthetase and ligase [Thermomicrobium roseum DSM
5159]
Length = 560
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/536 (41%), Positives = 313/536 (58%), Gaps = 21/536 (3%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTPL +ER D ++ + T+ + R +LAS+L G+ PG V+V+ N
Sbjct: 28 LTPLMLLERTLHVFPDKVGVVDGNRRLTYREFGARVYRLASALRGRGLQPGDRVAVLCRN 87
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
E HFAVP G + IN RL + + IL+HS ++ + +D +SL+ P
Sbjct: 88 SLEALEAHFAVPQMGGVLVPINVRLSSEEVRYILEHSGARALILDGALASLVE------P 141
Query: 134 PHSKTPKLVLIT-DDKEISSSSSPPPRIPPADFVDT-YENMLAKGDPQFSWVRPKSDLDP 191
P+L L+ D + +PP R A F D YE +LA+G P S + + +
Sbjct: 142 IRGALPELRLVVWADIDSRHGDAPPAR---ASFADVEYEALLAEGSPDPSVYPLRDEEEV 198
Query: 192 MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGA 251
+ +NYT GTT PKGV+ ++ ++ A+ +I+ + +S LWTLPMFH NGW F +
Sbjct: 199 LSINYTSGTTGRPKGVMVTHRGAYLNALGEIIEARLVPESAYLWTLPMFHCNGWYFPYAV 258
Query: 252 AVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL---SSSPEAKQLDRPVRILT 308
+GAT+V L K D +F LI + GVTH CGAP VL +L SP+ + RP+ +LT
Sbjct: 259 TGIGATHVVLPKVDPSRIFQLIEQEGVTHFCGAPTVLIMLLQGRPSPDYR-FPRPLTVLT 317
Query: 309 AGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVR 368
A +PP + E++G + H YG TE G + C W +W+ LP ERA LKARQGV
Sbjct: 318 AAAPPAPATIAAMEAMGARIVHVYGLTETYGPHTVCEWHEEWDALPLEERARLKARQGVG 377
Query: 369 TIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDV 428
I E+ +VD E V DG+T GE+VMRG ++M GY +D EAT++ G +++GD+
Sbjct: 378 YIHAPELRVVD-EAMRDVPADGETLGEVVMRGNNVMKGYYRDEEATARAFAGGWFHSGDL 436
Query: 429 GMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCA 488
++HPDGY+E++DR KD+IISGGENIS+ E+E LY HP V E AV+G PD W E+P A
Sbjct: 437 AVVHPDGYIELRDRKKDIIISGGENISTIEVERALYQHPAVLECAVIGIPDEKWGEVPKA 496
Query: 489 FVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
FV LK GM T +++I +CR R+ Y PK V ++ LPKT+TGK+QK+VL
Sbjct: 497 FVVLKP-----GMHATPEELIAFCRDRLAHYKCPKQVELVESLPKTSTGKIQKFVL 547
>gi|424855523|ref|ZP_18279824.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
gi|356663275|gb|EHI43401.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
Length = 543
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/553 (38%), Positives = 311/553 (56%), Gaps = 27/553 (4%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTPL F++R+AT D ++++ T++T+ + + + A L + G+ PG V+ + PN
Sbjct: 8 LTPLSFLQRSATVYADNVAVVHGKTSWTYEELAAKVERRARMLRASGVRPGDRVAYLMPN 67
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
+P M HFAVP++GA+ INTRL + IL HS + ++ VD + ++
Sbjct: 68 VPEMLAAHFAVPLAGAVLVAINTRLAPDEVRYILDHSGATVLVVDSEYADIV-------- 119
Query: 134 PHSKTPKLVLITDDKEISSSSSP--PPRIPPADFVDTYENMLAKGD-PQFSWVRPKSD-L 189
TP + + I+ + P P R+ ++ LA D Q + V D
Sbjct: 120 ----TPIAGALETVRTIAVAVDPVGPSRVAEVPGAIAFDAFLAGADRDQDALVWAVDDER 175
Query: 190 DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249
P+ +NYT GTT PKGVV ++ ++ + + SV LWTLPMFH NGW TW
Sbjct: 176 SPISINYTSGTTGRPKGVVYTHRGAYLNSFGEIFHSAHNAASVYLWTLPMFHCNGWCTTW 235
Query: 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTA 309
G T VCLR+ V+ LI +H VTH+ GAP V+ + ++PEA LD + + A
Sbjct: 236 ALVAAGGTQVCLREVRGDRVWELIDRHRVTHLNGAPTVVTTILNAPEAHTLDESLVVTVA 295
Query: 310 GSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRT 369
G+PP L ES+GF + H YG TE G +C W+ W L A ERA +++RQGV
Sbjct: 296 GAPPSPTTLSEAESMGFTIVHVYGLTETYGPYTACVWQDGWRDLRADERARMQSRQGVAM 355
Query: 370 IGLTEVDIVDPE----TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYT 425
+ V +V+ E + V DG T GEIVMRG ++M Y +DPEAT + G +++
Sbjct: 356 VQADPVRVVEAELLDGQLVDVPADGLTMGEIVMRGNNVMREYYRDPEATDAALAGGWFHS 415
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+G+MHPDGY+E+ DR+KDVI+SGGENIS+ E+E + SHP V E AV+G PD W E
Sbjct: 416 GDLGVMHPDGYVELLDRAKDVIVSGGENISTVEVEHAVASHPDVLEVAVIGVPDAKWGER 475
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLG 545
P AFV + G + D++++ R+RI RY P+ V + ELPKT+TGKVQK+ L
Sbjct: 476 PKAFVVARHGRN-----LDAADVLEHVRSRIARYKAPRAVEVVPELPKTSTGKVQKFELR 530
Query: 546 DIANSMSMSHSRM 558
+ N S SR+
Sbjct: 531 E--NEWSDETSRI 541
>gi|325000683|ref|ZP_08121795.1| AMP-dependent synthetase and ligase [Pseudonocardia sp. P1]
Length = 532
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/536 (39%), Positives = 313/536 (58%), Gaps = 35/536 (6%)
Query: 13 PLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAP 72
PLTP +++RAA A D +++ D +T+++ + RC +LA L++ I+ G V+V+ P
Sbjct: 23 PLTPTSYLDRAAAAHGDRVAVVDGDLRFTYAELHERCRKLAGGLAA--IHSGRPVAVLVP 80
Query: 73 NIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLF 132
N E + VP SG +NTRL A ++ IL+H + ++ D + L+ +V+
Sbjct: 81 NTHVGLEAAYGVPWSGVPLVAVNTRLSAGEVAYILEHCRASVLVHDPVFDELVADVLGRL 140
Query: 133 PPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPM 192
P+ V + DD YE ++ G+P + V P + +
Sbjct: 141 ---DDPPRAVRVGDD---------------------YERLITWGEP--TAVTPDDERALL 174
Query: 193 VLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAA 252
+NYT GTT PKGV+ ++ ++ A+ + + SV LWTLPMFH NGW F W
Sbjct: 175 SINYTSGTTGRPKGVMYHHRGAYLQALAMVGHTGLTPSSVHLWTLPMFHCNGWCFPWAVT 234
Query: 253 VVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSP 312
AT+VCL + + ++ L+R GVTH+ GAP VL++++ +PEA + VR+ T G+P
Sbjct: 235 AAAATHVCLPRVEPARIWELVRDQGVTHLNGAPTVLSMIAHAPEAGPVATTVRVATGGAP 294
Query: 313 PPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGL 372
P +L R LGF V+H YG TE G + C W+P+WN L +A +KARQGV +
Sbjct: 295 PSPAILRRMAELGFEVTHLYGLTETFGPAMICDWRPEWNALDGEAQARMKARQGVGNMIA 354
Query: 373 TEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMH 432
V ++ + G DG T G+I +RG ++MLGYL D +AT + DG + TGD+G+MH
Sbjct: 355 CAVRVITDDGG-DAPADGTTTGQIALRGNNVMLGYLDDEQATREAAPDGWFRTGDIGVMH 413
Query: 433 PDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSL 492
PDGY+E++DRSKDVI+SGGENI+S E+E + HP V E AV+ PD W E+P A+V+L
Sbjct: 414 PDGYVELRDRSKDVIVSGGENIASVEVEQAIADHPDVLEVAVIAVPDERWGEVPAAYVTL 473
Query: 493 KTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIA 548
+ G TE++I+++ R R+ R+ PK VVF ELPKT+TGK+QK+VL D A
Sbjct: 474 RDGA-----TVTEEEIVEHVRTRLARFKAPKRVVFT-ELPKTSTGKIQKFVLRDEA 523
>gi|146279762|ref|YP_001169920.1| hypothetical protein Rsph17025_3751 [Rhodobacter sphaeroides ATCC
17025]
gi|145558003|gb|ABP72615.1| hypothetical protein Rsph17025_3751 [Rhodobacter sphaeroides ATCC
17025]
Length = 549
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 231/554 (41%), Positives = 321/554 (57%), Gaps = 26/554 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P+PA PL+PL F+ RAA ++I D +TW++ RC +LA +L++ + P
Sbjct: 11 LTPSPATDVPLSPLTFLRRAARVWPGQVAVIDGDRHFTWAEYADRCRRLAGALTALSVKP 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+V+APN+P + E HF V ++GA+ N +NTRLD ++ IL HSE+K++ VD ++
Sbjct: 71 GDVVAVLAPNVPLILEAHFGVALAGAVLNPLNTRLDGPGLAFILAHSEAKVLLVDASLAA 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPA-DFVDTYENMLAKGDPQFSW 182
L E ++ P VL+ + PP +P A D+ W
Sbjct: 131 LAAEALAG----LGHPPAVLV------AGEGPPPAGLPGAHDYEAALAAAEPA-----PW 175
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P S+ DP+ +NYT GTT PKGVV ++ + A+ ++ + S LWTLP FH
Sbjct: 176 RLPDSEWDPIAVNYTSGTTGNPKGVVLHHRGAHLAALANMAVLGLRSDSRYLWTLPAFHC 235
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVL----NLLSSSPEAK 298
NGWS W AA G T VCL + D + I + +TH+C AP+VL N+ PE
Sbjct: 236 NGWSGIWAAAAAGTTQVCLPRVDPVAILNRIEEAAITHLCAAPVVLTMILNVRDGVPERG 295
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
RPV I T G+ P + VL + GF V H YG TE G CA + W L +
Sbjct: 296 PGSRPVIIGTGGAAPTSAVLAAAAARGFDVIHMYGMTESYGPTTVCAPQAAWADLAPADL 355
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A+++ARQGV + + +V ++DPE G DG+T GEI RG ++MLGYLK+P AT++ +
Sbjct: 356 AAVRARQGVPLVAVEDVTVIDPE-GRPAPADGRTLGEIAFRGNTVMLGYLKNPAATAETL 414
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
G TGD+G++HPDGYLE+KDR+KD+IISGGENISS E+E VL H V EAAVV P
Sbjct: 415 AGGWLRTGDLGVLHPDGYLEVKDRAKDIIISGGENISSLEVEEVLSRHAAVLEAAVVAEP 474
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
PFW E P AFV+L+ + G T D+I + R + + VP+ VVF D LPKTATGK
Sbjct: 475 HPFWGESPAAFVTLR----ADGPAPTGADLIAWVRDHLAHFKVPRRVVFRD-LPKTATGK 529
Query: 539 VQKYVLGDIANSMS 552
+QK VL + A ++
Sbjct: 530 IQKSVLREEARRIA 543
>gi|258650301|ref|YP_003199457.1| AMP-dependent synthetase and ligase [Nakamurella multipartita DSM
44233]
gi|258553526|gb|ACV76468.1| AMP-dependent synthetase and ligase [Nakamurella multipartita DSM
44233]
Length = 541
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/537 (39%), Positives = 314/537 (58%), Gaps = 22/537 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PLTPL F++R+A P+I+Y Y++++ +LA +L + I PG V
Sbjct: 6 ANDSPLTPLRFLQRSAEVYPTKPAIVYGARRYSYAEFADAAQRLAQALRAR-IEPGDRVV 64
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+APN+P M HFAVP++G + +N+RL I IL HSE+KL+FVD + L+ V
Sbjct: 65 FLAPNVPEMLIAHFAVPLAGGVLVALNSRLAKAEIDYILNHSEAKLLFVD---AELVATV 121
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADF-VDTYENMLAKGDPQFS---WVR 184
+ ++ I D + ++S D +Y + LA+ DP + W
Sbjct: 122 GNSLAAAPALTGVIEIADAEFGLAASG-------LDVGQQSYASFLAEADPAAAPLPWTV 174
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
+ + +NYT GTT PKGV+ ++ ++ + ++ SV LWTLPMFH NG
Sbjct: 175 -ADERTVISINYTSGTTGKPKGVMYTHRGAYLNSFGEIVHNQFTGDSVYLWTLPMFHCNG 233
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPV 304
W W GAT+VCLR A V++ + GVTH+CGAP V ++++ + +A LDRP+
Sbjct: 234 WCTPWAVTGAGATHVCLRAVRADAVWSALDGLGVTHLCGAPTVCSIIADAGQAHPLDRPM 293
Query: 305 RILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
RI TAG+PP V+ + + LG V H YG TE+ G C ++ +W+ LP +RA +R
Sbjct: 294 RITTAGAPPSPTVIEKLDRLGVTVVHVYGLTEVYGPFTICEYQREWDDLPPADRARRLSR 353
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYY 424
QGV + +VD E + V DG T GEIV+RG ++M GY KD AT + + G ++
Sbjct: 354 QGVGMLQAESARVVD-EQLVDVPADGITIGEIVLRGNNVMAGYFKDDAATEQAFRGGWFH 412
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
+GD+G+MHPDGY+E+KDR+KD+IISGGENIS+ E+E+ + SHP V EAAV+G P W E
Sbjct: 413 SGDLGVMHPDGYIELKDRAKDIIISGGENISTIEVENAVLSHPAVAEAAVIGMPSVKWGE 472
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
P AFV ++ G + + I+ + + I ++ VP V+F+D LP+TATGK++K
Sbjct: 473 RPRAFVVVRPGVE-----VSSAAILDHVKGLIAKFKVPDEVIFVDVLPRTATGKIRK 524
>gi|254450797|ref|ZP_05064234.1| AMP-dependent synthetase and ligase [Octadecabacter arcticus 238]
gi|198265203|gb|EDY89473.1| AMP-dependent synthetase and ligase [Octadecabacter arcticus 238]
Length = 517
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/530 (40%), Positives = 308/530 (58%), Gaps = 20/530 (3%)
Query: 17 LGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPA 76
+ + RAA D +++Y DT T+ + R QLAS+L G+ G VVS + PNIPA
Sbjct: 1 MSHLARAAKVFPDREALVYGDTRLTYRDYHARVSQLASALQIAGVVAGDVVSTLLPNIPA 60
Query: 77 MYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHS 136
E HF VP +GA+ NTIN RLD TI+ I H E+K+V VD + ++ +
Sbjct: 61 QAEAHFGVPAAGAVLNTINIRLDVDTIAYIFDHGEAKVVLVDSQFLPVCMQAIEAM--EG 118
Query: 137 KTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNY 196
P +V + D P +P YE LA GDP F+WV P+ + + + LNY
Sbjct: 119 AAPLVVEVPD---------PIAGVPEIGKQIDYETFLAAGDPNFAWVLPEDEWESLALNY 169
Query: 197 TWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGA 256
T GTT PKGVV ++ +++ + + + W + + L +P+FH NGW+ TW ++G
Sbjct: 170 TSGTTGQPKGVVYHHRGAYLMTMGTPVTWRMTLHPIFLTIVPLFHCNGWNHTWMMPMLGG 229
Query: 257 TNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLDRPVRILTAGSPPP 314
T VC R A ++A I GVTH GAPIVLNLL + S + + D V + TAG+PP
Sbjct: 230 TVVCCRDVSAAAIYAAIADEGVTHFGGAPIVLNLLVNAKSEDRRDFDHTVEVFTAGAPPA 289
Query: 315 APVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTE 374
L LGF V YG TE G C W W+ LP ++++++ARQGV + +
Sbjct: 290 PATLAAIGDLGFNVQQVYGLTETYGHVTECLWNDNWDTLPLDKQSAIRARQGVAFPQMED 349
Query: 375 VDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPD 434
+ ++ + V DG+T+GEIV+RG S+M GYLK+P+AT+K K G +++ D+ + HPD
Sbjct: 350 ITVMS-DAMEQVAMDGKTQGEIVIRGNSVMKGYLKNPDATAKAFKGGYFHSEDLAVQHPD 408
Query: 435 GYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKT 494
G ++I DR+KD+IISGGENISS E+E+ L HP V AVV PD W E+PCAFV LK
Sbjct: 409 GSMQIADRAKDIIISGGENISSVEVENALMGHPDVMLCAVVAMPDDKWGEVPCAFVELKV 468
Query: 495 GTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
G ++ + + +I + + R+ + PK +VF ELPKT+TGK+QK+ L
Sbjct: 469 GHEA-----SAEALISFTKQRLAGFKCPKRIVF-GELPKTSTGKIQKFEL 512
>gi|111026466|ref|YP_708749.1| long-chain-fatty-acid--CoA ligase [Rhodococcus jostii RHA1]
gi|110825309|gb|ABH00591.1| probable long-chain-fatty-acid--CoA ligase [Rhodococcus jostii
RHA1]
Length = 542
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/538 (40%), Positives = 303/538 (56%), Gaps = 17/538 (3%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
+ LTPL F+ R+A D ++IY D T+ +L + G+ PG V+ +
Sbjct: 5 TTQLTPLSFLRRSADVYPDKTAVIYGDEALTYRALAEAVELRVRALRAAGVRPGDRVAYL 64
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVS 130
PN+P M HFAVP++GA+ INTRL I I+ HS+S + +D SS +++V
Sbjct: 65 MPNVPEMLIAHFAVPLAGAVLVAINTRLSGEEIRYIVDHSQSTFLVIDTALSSSIVDVAE 124
Query: 131 LFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLD 190
F +V +TDD +++ R DF D + P W +
Sbjct: 125 KF---ETVETIVTVTDDAASGTAALAECR----DFSDLLAMVHGVNLPAIEWA-VDDERS 176
Query: 191 PMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
+ +NYT GTT PKGV+ ++ ++ A+ LI SV LWTLPMFH NGWS W
Sbjct: 177 LLSINYTSGTTGKPKGVMYSHRGAYLNAIGELIHSKHDVDSVYLWTLPMFHCNGWSTGWA 236
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAG 310
A G T VCLR+ + ++ LI +HGVTH+ GAP V+ + +S A +LDRP+ + TAG
Sbjct: 237 VAAAGGTQVCLREVRSELIWNLIDRHGVTHLNGAPTVIITIMNSGRAHKLDRPIIVTTAG 296
Query: 311 SPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTI 370
+PP + R +GF V H YG TE G C + W L A RA ARQGV I
Sbjct: 297 APPSPTTIERMADIGFEVVHVYGLTETYGPYSICEPQSSWKSLDAATRARRMARQGVGMI 356
Query: 371 GLTEVDIVDPET--GL--SVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
+ +V E+ GL V DG T GEIVMRG ++M GY ++PEAT G +++G
Sbjct: 357 QADRMRVVSTESPEGLLVDVPADGVTIGEIVMRGNNVMSGYYRNPEATRSAFGGGWFHSG 416
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+G+MHPDGY+E++DR+KD+IISGGENIS+ E+E L +HP V EAAVVG PDP W E P
Sbjct: 417 DLGVMHPDGYVELRDRAKDIIISGGENISTVEVEQALMTHPAVIEAAVVGVPDPQWGERP 476
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
AFV + D T D++++ + RI RY P+ +V + LPKT+TGK++K+ L
Sbjct: 477 KAFVVVIEPGD-----VTAADLLEHVQTRIARYKAPREIVVVPNLPKTSTGKIRKFEL 529
>gi|114705184|ref|ZP_01438092.1| acyl-CoA synthase [Fulvimarina pelagi HTCC2506]
gi|114539969|gb|EAU43089.1| acyl-CoA synthase [Fulvimarina pelagi HTCC2506]
Length = 536
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/554 (38%), Positives = 310/554 (55%), Gaps = 38/554 (6%)
Query: 2 DRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGI 61
+ L+P PAN PLTPL F++ A + ++++ D ++TWS+ ++ L+LA +L GI
Sbjct: 5 EHLRPRPANFNPLTPLDFLDHAVNSLPTKTAVVWRDRSWTWSEFHQIVLRLAKALKDRGI 64
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
G VVS++ PN P M H+A+P GA+ N++NTR++A+ ++ ILKH+ES+L+ D
Sbjct: 65 QKGDVVSIMCPNRPEMLAAHYAIPALGAVLNSVNTRIEAKDVAFILKHAESRLILADPTC 124
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDK-----EISSSSSPPPRIPPADFVDTYENMLAKG 176
+ + + P V D + ++ S PP A+ D ++
Sbjct: 125 ADDARKAAQ----ETGVPIEVFAEDGESGDGLKLLSGERPPEIDLIAEITDEWQ------ 174
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
P+ LNYT GTT PKGVV ++ ++ AV ++ ++ LWT
Sbjct: 175 --------------PIALNYTSGTTGNPKGVVLHHRGAWLNAVGNITALQFNDKTAYLWT 220
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSS 294
LPMFH NGW TW G T+VCL K VF + + GVTH+ AP+VL +L S +
Sbjct: 221 LPMFHCNGWCHTWSITAAGGTHVCLDKVVPEAVFEAMDRIGVTHLSCAPVVLYMLINSDA 280
Query: 295 PEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLP 354
E + R + + T G+ P A ++ + ++LGF H YG TE G L
Sbjct: 281 KEKRDASRRITVATGGAAPTASLIKQMDALGFDFIHLYGLTECYGPTSIRELNEHEAGLD 340
Query: 355 ARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEAT 414
ERA+L ARQGVR + + +V+ E G V DG T GEIV+ G +L+ GY ++P+ T
Sbjct: 341 VEERANLLARQGVRHLSANRIRVVNDE-GAEVPADGTTVGEIVLTGNTLLAGYYRNPDET 399
Query: 415 SKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474
K G ++TGD+ + HPDG++EIKDR+KDVII+GGEN+SS E+E VL HP V AAV
Sbjct: 400 EKAFAGGGFHTGDLAVRHPDGHIEIKDRAKDVIITGGENVSSLEVEDVLSKHPDVAIAAV 459
Query: 475 VGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKT 534
V +PD W EIP AF+ K+GT + + +CR +P + +P+ F ELPKT
Sbjct: 460 VAKPDEKWGEIPMAFIEAKSGTSP-----QPETLETFCREHLPGFKIPRAWAFC-ELPKT 513
Query: 535 ATGKVQKYVLGDIA 548
ATGK+QKYVL + A
Sbjct: 514 ATGKIQKYVLREQA 527
>gi|298245485|ref|ZP_06969291.1| AMP-dependent synthetase and ligase [Ktedonobacter racemifer DSM
44963]
gi|297552966|gb|EFH86831.1| AMP-dependent synthetase and ligase [Ktedonobacter racemifer DSM
44963]
Length = 525
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/537 (39%), Positives = 307/537 (57%), Gaps = 40/537 (7%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTP+ F+ER+A + ++I+ Y++ Q +R +LA+ L ++ ++ V+ + PN
Sbjct: 10 LTPVSFLERSALIFPEKVAVIHGQRHYSYLQFAQRVYRLAAQLRAYSLHKHDRVAFLCPN 69
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----HLSSSLLLEVV 129
IP + E H+AVP +G I INTRL + I+ IL+HS + +FVD HL L L+ +
Sbjct: 70 IPPLLEAHYAVPAAGGILVAINTRLSSNEINFILQHSGASFLFVDNELYHLVEQLNLDAL 129
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ--FSWVRPKS 187
+++ I DD D YE LA+G+P SW+ +
Sbjct: 130 ----------QVIRIADDGTDD---------------DPYEQFLAQGNPHPLHSWLVDEE 164
Query: 188 DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSF 247
+ + +NYT GTT PKGV+ Y+ ++ A+ +I+ + +S+ LWTLPMFH NGW F
Sbjct: 165 E--TISINYTSGTTGNPKGVMYTYRGAYLNALGEVIETGLNSESIYLWTLPMFHCNGWCF 222
Query: 248 TWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRIL 307
TW VGAT+VCLRK + V+ L+ +TH GAP V L++ P+A L RPV
Sbjct: 223 TWAVTAVGATHVCLRKVEPEQVWELLENQSITHYNGAPTVQIFLANHPKAHPLSRPVTAT 282
Query: 308 TAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AG+PP +L + +SL H YG TE G C W +WN E+A+L ARQG
Sbjct: 283 IAGAPPSPTLLGQLKSLNIRPLHVYGLTETYGPYTVCEWHEEWNMRSEEEQAALLARQGQ 342
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGD 427
+ + IV+P+ G + +DG T GE+VMRG ++ GY + AT K G +++GD
Sbjct: 343 GYVTAEQARIVNPDLG-DLPKDGSTMGEVVMRGNNVAKGYYGNELATEKAFAGGWFHSGD 401
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+G+ H D Y+E++DR+KDVIISGGENIS+ E+E ++ HP V E AVV PD W E P
Sbjct: 402 IGVWHEDNYIELRDRAKDVIISGGENISTIEVEQLIARHPAVLECAVVAIPDATWGERPK 461
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
AF++LK ++ TE++II +C R+ + P V F LPKT+TGKVQKYVL
Sbjct: 462 AFITLKPEREA-----TEEEIIAFCWERLAHFKCPTAVEF-GLLPKTSTGKVQKYVL 512
>gi|110742545|dbj|BAE99188.1| AMP-binding protein [Arabidopsis thaliana]
Length = 321
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/322 (57%), Positives = 238/322 (73%), Gaps = 6/322 (1%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSF 59
M+++KP ANS PLTP+GF+ERAAT DC SI+Y ++T YTW +T RCL++ASSLSS
Sbjct: 1 MEQMKPCAANSPPLTPIGFLERAATVYGDCTSIVYGSNTVYTWRETNLRCLRVASSLSSI 60
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
GI VVSV++PN PAMYEL FAVPMSGAI N INTRLDART+S++L+H SKL+FVD
Sbjct: 61 GIGRSDVVSVLSPNTPAMYELQFAVPMSGAILNNINTRLDARTVSVLLRHCGSKLLFVDV 120
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
S L +E +S+ + P LV I D +E + R F TY++++ +GD
Sbjct: 121 FSVDLAVEAISMMT--TDPPILVFIADKEEEGGDADVADR---TKFSYTYDDLIHRGDLD 175
Query: 180 FSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
F W+RP+S+ DP+VLNYT GTTSAPKGVV C++ F++++DSLIDW VPK V LWTLP+
Sbjct: 176 FKWIRPESEWDPVVLNYTSGTTSAPKGVVHCHRGIFVMSIDSLIDWTVPKNPVYLWTLPI 235
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGWS+ WG A VG TNVCLRKFDAP ++ LIR HGVTHMCGAP+VLN+LS++ E +
Sbjct: 236 FHANGWSYPWGIAAVGETNVCLRKFDAPLIYRLIRDHGVTHMCGAPVVLNMLSATNEFQP 295
Query: 300 LDRPVRILTAGSPPPAPVLLRT 321
L+RPV ILTAG+P P+ +T
Sbjct: 296 LNRPVNILTAGAPLDLPLYFQT 317
>gi|308179143|ref|YP_003918549.1| fatty acid--Co-A ligase [Arthrobacter arilaitensis Re117]
gi|307746606|emb|CBT77578.1| putative fatty acid--Co-A ligase [Arthrobacter arilaitensis Re117]
Length = 535
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/536 (38%), Positives = 307/536 (57%), Gaps = 17/536 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN LTPL F+ER A + ++I+ +Y++++ R + A +L + I PG V+
Sbjct: 6 ANHSELTPLRFLERTAEVYPNKSAVIHGTRSYSYNEFEARVHRFAQALKAR-IEPGDRVA 64
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
V+APN P M H+AVP++G + +NTRL A + I+ HSE+KL+ D + LL
Sbjct: 65 VLAPNTPEMLMAHYAVPLAGGVLIALNTRLSAHELQYIVDHSEAKLMLAD---TELLENA 121
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
+L + L+ ITDD+ + P T + +LA+ + +
Sbjct: 122 ETLRRENPTLDALIEITDDQYDGAR-------PNVQVDATLDELLAEASDEKLPYAIADE 174
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
P+ LNYT GTT PKGV+ ++ ++ ++ Q+ LWTLPMFH NGW
Sbjct: 175 RAPITLNYTSGTTGKPKGVLYSHRGSYLNSLGEAHHQGFTAQTRYLWTLPMFHCNGWCTP 234
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILT 308
W G T++ LR V+ I G TH+CGAP V ++++ S A QLD P+RI T
Sbjct: 235 WAVTAAGGTHLSLRGVREDAVWDAIENLGTTHLCGAPTVCSIIADSTRAHQLDSPLRITT 294
Query: 309 AGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVR 368
AG+PP ++ + + LG V H YG TE+ G C ++ +W++L RA+ ARQGV
Sbjct: 295 AGAPPSPAIISKLQKLGIEVVHVYGLTEVYGPYTVCEYQDEWDELDGPGRAAKLARQGVG 354
Query: 369 TIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDV 428
I IVD E +V DGQT GEIV+RG ++M+GY +D AT++ G ++TGD+
Sbjct: 355 MITAESARIVD-ENMNNVPADGQTMGEIVLRGNNVMIGYYRDEAATAQAFHGGWFHTGDL 413
Query: 429 GMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCA 488
G+MHPDGY++++DR+KD+IISGGENIS+ E+E L SHP V + AV+G D W E P A
Sbjct: 414 GVMHPDGYIQVRDRAKDIIISGGENISTIEVEQALASHPEVLDLAVIGVADEKWGERPVA 473
Query: 489 FVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
+V +G+ + +I + R ++ + VP+T+VF +LP+T+TGKVQK VL
Sbjct: 474 YVIRASGS-----TLDAETLIGFAREKLAGFKVPRTIVFPQDLPRTSTGKVQKNVL 524
>gi|432336531|ref|ZP_19588029.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus
wratislaviensis IFP 2016]
gi|430776546|gb|ELB91971.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus
wratislaviensis IFP 2016]
Length = 534
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/543 (39%), Positives = 312/543 (57%), Gaps = 24/543 (4%)
Query: 7 NPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHV 66
+PAN PL+PL F+ER+AT D ++I+ D Y++ + +LA L S I PG
Sbjct: 7 SPANYTPLSPLRFLERSATVFPDRVAVIHGDRRYSYREFGDEVERLARVLRSR-IEPGDR 65
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V+ + PN P M HFAVP++G IF +N RL R + IL+HS + L+FVD S L
Sbjct: 66 VAFLCPNTPEMLFAHFAVPLAGGIFIALNWRLAGRELEYILEHSGTSLLFVD---SEL-- 120
Query: 127 EVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD-----PQFS 181
V S+ P L + EI S+ P +P Y + LA D P
Sbjct: 121 -VGSVATARHAVPSLREVI---EIPDSTIARPVVPEGIATGMYADFLAAADDVDDIPLHW 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
V + + + +NYT GTT PKGV+ ++ ++ ++ + LWTLPMFH
Sbjct: 177 GVNDEQQV--IAINYTSGTTGKPKGVMYTHRGAYLNSLGETFHNGFTGSTKYLWTLPMFH 234
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD 301
NGW W T++CLR A ++ I GVTH+CGAP V + ++ +P+A +D
Sbjct: 235 CNGWCTPWAVTQAAGTHICLRAVRADAIWDAIDTLGVTHLCGAPAVCSTIAEAPQAHPVD 294
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+RI TA +PP V+ + E++G V H YG TE+ G C ++ W++ A ERASL
Sbjct: 295 -ALRITTAAAPPSPTVIAQLEAIGVTVVHVYGLTEVYGPYTICEYQESWSERTAEERASL 353
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
+RQGV + +VD + V DG+T GEIV+RG ++MLGY ++PEAT++ G
Sbjct: 354 LSRQGVGMVQAENARVVDAQMN-DVPADGETMGEIVLRGNNVMLGYYRNPEATAEAFAGG 412
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G+MHPDGY+++KDR+KD++ISGGENIS+ E+E L +HP V + AV+G P P
Sbjct: 413 WFHTGDLGVMHPDGYIQLKDRAKDIVISGGENISTIEVEQALITHPAVLDVAVIGVPHPK 472
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P AFV ++ G T ++++++ R RI ++ VP +VF ELP+T TGKV K
Sbjct: 473 WGERPKAFVIVRKGA-----TVTAEELVEHTRGRIAKFKVPDEIVFPLELPRTPTGKVLK 527
Query: 542 YVL 544
+ L
Sbjct: 528 FEL 530
>gi|375093193|ref|ZP_09739458.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora marina XMU15]
gi|374653926|gb|EHR48759.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora marina XMU15]
Length = 525
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/536 (39%), Positives = 313/536 (58%), Gaps = 35/536 (6%)
Query: 13 PLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAP 72
PLTP+ +++RAA A +++ + +T++Q + RC +LA L++ G V+V+A
Sbjct: 9 PLTPVSYLDRAAAAHGSRTAVVDGEHRWTYTQLHDRCRRLAGGLAAPA--EGRPVAVLAA 66
Query: 73 NIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLF 132
N + E +F VP +G +NTRL AR ++ IL+H ++++ D L+ +
Sbjct: 67 NTHVLLEANFGVPWAGVPLVAVNTRLSAREVAYILEHCGARVLVHDPAFDDLVAQA---- 122
Query: 133 PPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPM 192
+ PP + A + YE +LA +P P + +
Sbjct: 123 ------------------RGELAEPPVVIRAG--EEYEQLLAGAEPMAR--TPADERALL 160
Query: 193 VLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAA 252
+NYT GTT PKGV+ ++ ++ A+ + + +V LWTLPMFH NGW F W
Sbjct: 161 SINYTSGTTGRPKGVMYHHRGAYLQALAMVAHTGLSPSAVHLWTLPMFHCNGWCFPWAVT 220
Query: 253 VVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSP 312
AT+VCL K + V+ L+R+ GVTH+ GAP VL++L+ + +A L+R VR+ T G+P
Sbjct: 221 AAAATHVCLPKVEPAEVWRLLRQEGVTHLEGAPTVLSMLAYAEQAAPLERTVRVATGGAP 280
Query: 313 PPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGL 372
P +L R LGF V+H YG TE G + C W+P+WN L A E+A LKARQGV +
Sbjct: 281 PTPAILRRMGELGFDVTHLYGLTETFGPAMVCDWRPEWNALAAEEQARLKARQGVGNMIS 340
Query: 373 TEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMH 432
+V +V + G V DG++ G+I +RG ++MLGY +D EAT + DG + TGD+G+ H
Sbjct: 341 CQVRVV-ADDGTDVPADGESVGQIALRGNNVMLGYFRDEEATRQAAPDGWFRTGDLGVRH 399
Query: 433 PDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSL 492
PDGY+E++DRSKDVIISGGENI+S E+E + HP V E AV+ PD W E+P A+V++
Sbjct: 400 PDGYVELRDRSKDVIISGGENIASVEVEQAIAEHPAVFEVAVIAVPDDHWGEVPAAYVTV 459
Query: 493 KTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIA 548
G +E ++I + R R+ + PK+VVF ELPKT+TGK+QKYVL + A
Sbjct: 460 HEGAS-----VSESELIAHVRERLAHFKAPKSVVF-GELPKTSTGKIQKYVLRERA 509
>gi|419962482|ref|ZP_14478473.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus opacus M213]
gi|414572120|gb|EKT82822.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus opacus M213]
Length = 534
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/543 (39%), Positives = 312/543 (57%), Gaps = 24/543 (4%)
Query: 7 NPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHV 66
+PAN PL+PL F+ER+AT D ++I+ D Y++ + +LA L S I PG
Sbjct: 7 SPANHTPLSPLRFLERSATVFPDRVAVIHGDRRYSYREFGDEVERLARVLRSR-IEPGDR 65
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V+ + PN P M HFAVP++G IF +N RL R + IL+HS + L+FVD S L
Sbjct: 66 VAFLCPNTPEMLFAHFAVPLAGGIFIALNWRLAGRELEYILEHSGTSLLFVD---SEL-- 120
Query: 127 EVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD-----PQFS 181
V S+ P L + EI S+ P +P Y + LA D P
Sbjct: 121 -VGSVATARDAVPSLREVI---EIPDSTIARPVVPEGIATGMYADFLAAADDVDDNPLHW 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
V + + + +NYT GTT PKGV+ ++ ++ ++ + LWTLPMFH
Sbjct: 177 GVDDEQQV--IAINYTSGTTGKPKGVMYTHRGAYLNSLGETFHNGFTGSTKYLWTLPMFH 234
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD 301
NGW W T++CLR A ++ I GVTH+CGAP V + ++ +P+A +D
Sbjct: 235 CNGWCTPWAVTQAAGTHICLRAVRADAIWDAIDTLGVTHLCGAPAVCSTIAEAPQAHPVD 294
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+RI TA +PP V+ + E++G V H YG TE+ G C ++ W++ A ERASL
Sbjct: 295 -ALRITTAAAPPSPTVIAQLEAIGVTVVHVYGLTEVYGPYTICEYQESWSERTAEERASL 353
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
+RQGV + +VD + V DG+T GEIV+RG ++MLGY ++PEAT++ G
Sbjct: 354 LSRQGVGMVQAENARVVDAQM-TDVPADGETMGEIVLRGNNVMLGYYRNPEATAEAFAGG 412
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G+MHPDGY+++KDR+KD++ISGGENIS+ E+E L +HP V + AV+G P P
Sbjct: 413 WFHTGDLGVMHPDGYIQLKDRAKDIVISGGENISTIEVEQALITHPAVLDVAVIGVPHPK 472
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P AFV ++ G T ++++++ R RI ++ VP +VF ELP+T TGKV K
Sbjct: 473 WGERPKAFVIVRKGA-----TVTAEELVEHTRGRIAKFKVPDEIVFPLELPRTPTGKVLK 527
Query: 542 YVL 544
+ L
Sbjct: 528 FEL 530
>gi|257454119|ref|ZP_05619392.1| AMP-dependent synthetase and ligase [Enhydrobacter aerosaccus SK60]
gi|257448447|gb|EEV23417.1| AMP-dependent synthetase and ligase [Enhydrobacter aerosaccus SK60]
Length = 515
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/490 (41%), Positives = 285/490 (58%), Gaps = 23/490 (4%)
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN PAM E+ F VPMSG + T+NTRLD + L+HSE+K++ VD + V
Sbjct: 1 PNTPAMVEVAFGVPMSGGVLCTLNTRLDINALVFCLQHSEAKVLIVDTEFEQHIALVQES 60
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD-TYENMLAKGDPQFSWVRPKSDLD 190
FP L++I ++ P P F + TYE ++A G +W +P + D
Sbjct: 61 FP------NLIII--------HATDPAVTPTEQFGNMTYEELIASGTDLDNWEKPTDEWD 106
Query: 191 PMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
+ LNYT GTT PKGVV ++ + AV +++DW +PK V LWTLP+FH NGWSF W
Sbjct: 107 AIALNYTSGTTGIPKGVVYHHRGATLNAVSNILDWDMPKHPVYLWTLPLFHCNGWSFPWS 166
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA--KQLDRPVRILT 308
TNVCLRK DA + LI VTH APIV N++++ EA K + VR
Sbjct: 167 IGERAGTNVCLRKVDADLILRLIADEKVTHYSAAPIVHNMIANGNEALKKAIKHEVRCNV 226
Query: 309 AGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVR 368
AG+PPP +L + E +GF ++H YG TE+ G C +P+W+ L ERA K+RQG+
Sbjct: 227 AGAPPPESLLAKMEEMGFKITHVYGLTEVYGPVTLCVERPEWDDLTVSERAQKKSRQGMN 286
Query: 369 TIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDV 428
+ L D+ T V DG GE+ +RG +M GYLK+ +AT++ G + TGD+
Sbjct: 287 SHLLAGFDVFKQGTTTPVAADGSEIGELAIRGNMVMKGYLKNRKATAEAFNGGWFKTGDL 346
Query: 429 GMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCA 488
G+ +PDGY++I DR KD+IISGGENISS E+E+VLY P V VV P W E+P A
Sbjct: 347 GVKYPDGYIKIMDRLKDIIISGGENISSIEVENVLYRMPEVESCGVVAAPHDKWGEVPVA 406
Query: 489 FVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIA 548
F+ ++ G+ +DII +CR + + VPK ++F ++PKT+TGKVQK+ L A
Sbjct: 407 FIEIREGS-----TLDREDIIAHCRKYLAGFQVPKHIIFA-QIPKTSTGKVQKFELRQAA 460
Query: 549 NSMSMSHSRM 558
S++ +++
Sbjct: 461 RSLAHEEAKI 470
>gi|255561464|ref|XP_002521742.1| AMP dependent ligase, putative [Ricinus communis]
gi|223538955|gb|EEF40552.1| AMP dependent ligase, putative [Ricinus communis]
Length = 261
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/259 (71%), Positives = 211/259 (81%), Gaps = 6/259 (2%)
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L PV ILTAG+PPPA VLLRTESLGF+VSHGYG TE AGV VSCAWKPKWN LP ERA
Sbjct: 5 LKSPVHILTAGAPPPAAVLLRTESLGFVVSHGYGLTETAGVVVSCAWKPKWNMLPENERA 64
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L+ARQGV+ G TE+D++DP+TGLSVKRDG + GEIV+RGGS+M+GYLKDP+ TSKC+K
Sbjct: 65 RLRARQGVKIAGFTEMDVIDPKTGLSVKRDGLSLGEIVLRGGSVMMGYLKDPDGTSKCLK 124
Query: 420 ---DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
DG YTGDVG+MHPDGYLEIKDRSKDVIISGGENISS E+ESVLYS+P+VNEAAVV
Sbjct: 125 EDDDGWLYTGDVGVMHPDGYLEIKDRSKDVIISGGENISSVEVESVLYSNPVVNEAAVVA 184
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
RPD +W E PCAFVSLK G +EKDII+YCR R+ YM PKTVVF DELPKT+T
Sbjct: 185 RPDEYWGERPCAFVSLKDGVTE---RVSEKDIIEYCRERMAHYMAPKTVVFQDELPKTST 241
Query: 537 GKVQKYVLGDIANSMSMSH 555
GK+QK L +IA +M S
Sbjct: 242 GKIQKLALREIAKAMGASQ 260
>gi|384099935|ref|ZP_10001006.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus imtechensis
RKJ300]
gi|383842605|gb|EID81868.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus imtechensis
RKJ300]
Length = 534
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/543 (39%), Positives = 311/543 (57%), Gaps = 24/543 (4%)
Query: 7 NPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHV 66
+PAN PL+PL F+ER+AT D ++I+ D Y++ + +LA L S I PG
Sbjct: 7 SPANHTPLSPLRFLERSATVFPDRVAVIHGDRRYSYREFGDEVERLARVLRSR-IEPGDR 65
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V+ + PN P M HFAVP++G +F +N RL R + IL+HS + L+FVD S L
Sbjct: 66 VAFLCPNTPEMLFAHFAVPLAGGVFIALNWRLAGRELEYILEHSGTSLLFVD---SEL-- 120
Query: 127 EVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD-----PQFS 181
V S+ P L + EI S+ P +P Y + LA D P
Sbjct: 121 -VGSVATARHAVPSLREVI---EIPDSTIARPVVPEGIATGMYADFLAAADDVDDIPLHW 176
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
V + + + +NYT GTT PKG + ++ ++ ++ + LWTLPMFH
Sbjct: 177 GVDDEQQV--IAINYTSGTTGKPKGAMYTHRGAYLNSLGETFHNGFTGSTKYLWTLPMFH 234
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD 301
NGW W T++CLR A ++ I GVTH+CGAP V + ++ +P+A +D
Sbjct: 235 CNGWCTPWAVTQAAGTHICLRAVRADAIWDAIDTLGVTHLCGAPAVCSTIAEAPQAHPVD 294
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
+RI TA +PP V+ + E++G V H YG TE+ G C ++ W++ A ERASL
Sbjct: 295 -ALRITTAAAPPSPTVIAQLEAIGVTVVHVYGLTEVYGPYTICEYQESWSERTAEERASL 353
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
+RQGV + +VD + V DG+T GEIV+RG ++MLGY ++PEAT++ G
Sbjct: 354 LSRQGVGMVQAENARVVDAQMN-DVPADGETMGEIVLRGNNVMLGYYRNPEATAEAFAGG 412
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++TGD+G+MHPDGY+++KDR+KD+IISGGENIS+ E+E L +HP V + AV+G P P
Sbjct: 413 WFHTGDLGVMHPDGYIQLKDRAKDIIISGGENISTIEVEQALITHPAVLDVAVIGVPHPK 472
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P AFV ++ G T ++++++ R RI ++ VP +VF ELP+T TGKV K
Sbjct: 473 WGERPKAFVIVRKGA-----TVTAEELVEHTRGRIAKFKVPDEIVFPLELPRTPTGKVLK 527
Query: 542 YVL 544
+ L
Sbjct: 528 FEL 530
>gi|363419680|ref|ZP_09307778.1| o-succinylbenzoate--CoA ligase [Rhodococcus pyridinivorans AK37]
gi|359736787|gb|EHK85726.1| o-succinylbenzoate--CoA ligase [Rhodococcus pyridinivorans AK37]
Length = 508
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/532 (39%), Positives = 311/532 (58%), Gaps = 38/532 (7%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTP F++R+A D +++ D T+++ RCL+ + L + G+ PG V+V+APN
Sbjct: 10 LTPTAFLDRSARVFRDDLAVVDGDIRRTYAELRDRCLRQSGMLHALGVEPGDRVAVLAPN 69
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
M E H+ V +GA+ ++NTRL A + IL+HS S+++ V+ + L E +
Sbjct: 70 TSLMLEAHYGVLYAGAVLVSLNTRLTAPELRFILEHSGSRVLLVEESLADLAREATA--- 126
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMV 193
P + ++ DD E +++ +P AD M+A
Sbjct: 127 ---DLPSITVVGDDYEDKLAAARHRCVPLAD----ERTMIA------------------- 160
Query: 194 LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAV 253
LNYT GTT PKGV+ + ++ A+ + + + S LWTLPMFH NGW+FTW
Sbjct: 161 LNYTSGTTGDPKGVMYHARGAYLQALAMVAHFGLDSGSTYLWTLPMFHCNGWTFTWAVTA 220
Query: 254 VGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPP 313
G T+VCL K D ++ L+R VTH+CGAP VL L +P A +D V + G P
Sbjct: 221 AGGTHVCLPKVDPERIWDLVRTENVTHLCGAPTVLASLVDAPNAGGIDHRV-VAAIGGAP 279
Query: 314 PAPVLL-RTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGL 372
PAP L+ R +LG ++H YG TE G C W+ +W+ LP E+A L++RQGV +
Sbjct: 280 PAPALIERCTALGLDITHLYGLTETYGPAAICEWRSEWDVLPEDEKARLRSRQGVGNVVA 339
Query: 373 TEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMH 432
E+ IVDP G V DG+T GEI +RG ++MLGY +P+AT++ + DG + TGD+G+MH
Sbjct: 340 GELRIVDP-MGSDVPADGETTGEIALRGNNVMLGYYNNPDATARAVPDGWFRTGDIGVMH 398
Query: 433 PDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSL 492
PDGY+EI+DR+KDVIISGGENISS E+E+ L SHP V EAAVV P W E P A+V+L
Sbjct: 399 PDGYIEIRDRAKDVIISGGENISSVEVEAALISHPAVLEAAVVAAPSEKWGERPVAYVAL 458
Query: 493 KTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
++G + E ++ + R+++ + VP ++VF LPKTA+GK++K L
Sbjct: 459 RSGASA-----DEAELRAHVRSQLAGFKVPDSIVF-GALPKTASGKIRKVEL 504
>gi|146276839|ref|YP_001166998.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides ATCC
17025]
gi|145555080|gb|ABP69693.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides ATCC
17025]
Length = 549
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 226/558 (40%), Positives = 320/558 (57%), Gaps = 26/558 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
L P+PA PL+PL F+ RAA ++I D +TW++ RC +LA +L++ + P
Sbjct: 11 LTPSPATDVPLSPLTFLRRAARVWPGQVAVIDGDRHFTWAEYADRCRRLAGALTALSVKP 70
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G VV+V+APN+P + E HF V ++GA+ N +NTRLD ++ IL HSE+K++ VD ++
Sbjct: 71 GDVVAVLAPNVPLILEAHFGVALAGAVLNPLNTRLDGPGLAFILAHSEAKVLLVDASLAA 130
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPA-DFVDTYENMLAKGDPQFSW 182
L E ++ P VL+ + PP +P A D+ W
Sbjct: 131 LAAEALAG----LGHPPAVLV------AGEGPPPAGLPGAHDYEAALAAAEPA-----PW 175
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P S+ DP+ +NYT GTT PKGVV ++ + A+ ++ + S LWTLP FH
Sbjct: 176 RLPDSEWDPIAVNYTSGTTGNPKGVVLHHRGAHLAALANMAVLGLRSDSRYLWTLPAFHC 235
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVL----NLLSSSPEAK 298
NGWS W AA G T VCL + D + I + +TH+C AP+VL N+ PE
Sbjct: 236 NGWSGIWAAAAAGTTQVCLPRVDPVAILNRIEEAAITHLCAAPVVLTMILNIRDGVPERG 295
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
RPV I T G+ P + VL + GF V H YG TE G CA + W L +
Sbjct: 296 PGSRPVIIGTGGAAPTSAVLAAAAARGFDVIHMYGMTESYGPTTVCAPQAAWADLAPADL 355
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
A+++ARQGV + + +V ++DP+ G + DG+T GEI RG ++MLGYLK+P AT++ +
Sbjct: 356 AAVRARQGVPLVAVEDVTVLDPD-GRPIPADGRTLGEIAFRGNTVMLGYLKNPAATAETL 414
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
G TGD+G++HPDGY+E+KDR+KD+IISGGENISS E+E +L H V EAAVV P
Sbjct: 415 AGGWLRTGDLGVLHPDGYVEVKDRAKDIIISGGENISSLEVEEILSRHAAVVEAAVVAEP 474
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
PFW E P AFV+L+ + T D+I + R + + P+ VVF D LPKTATGK
Sbjct: 475 HPFWGESPAAFVTLRADVPA----PTGADLIAWVRDHLAHFKAPRRVVFQD-LPKTATGK 529
Query: 539 VQKYVLGDIANSMSMSHS 556
+QK L + A ++ S
Sbjct: 530 IQKATLREEARRIAAVQS 547
>gi|359426255|ref|ZP_09217340.1| putative fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
gi|358238296|dbj|GAB06922.1| putative fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
Length = 540
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/539 (38%), Positives = 308/539 (57%), Gaps = 19/539 (3%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
N ++PL F+ER+A D +I+Y + TYT+++ +LA L+S I PG V+
Sbjct: 10 NRSEMSPLRFLERSANVFPDRAAIVYGERTYTYAEFADETQRLARVLAS-KIEPGDRVAY 68
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+APNIP M HFAVP++G + +N+RL ++ IL HSE+ ++ D S + +
Sbjct: 69 LAPNIPEMLIAHFAVPLAGGVLVALNSRLAGAELAYILNHSEATILVADSEFHSTVAAIA 128
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLA-KGD-PQFSWVRPKS 187
+ P + V+ +D E + P + + + +Y L+ GD P W
Sbjct: 129 DVIP----SLHTVVEVEDPEFGT----PAGVEEIEGLVSYAEFLSGAGDLPARPWTVDDE 180
Query: 188 DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSF 247
+ + +NYT GTT PKGV+ ++ ++ + + LWTLPMFH NGW
Sbjct: 181 NT-VITINYTSGTTGKPKGVMYTHRGAYLNSFGETFHNQFTGHTRYLWTLPMFHCNGWCT 239
Query: 248 TWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRIL 307
W T++CLR A +++ I G THMCGAP V + + +A +LDRP+RI
Sbjct: 240 PWAVTAASGTHICLRAVRADAIWSAIDDLGATHMCGAPTVCTTIVGAEQAHELDRPLRIT 299
Query: 308 TAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
TAG+PP V+ + ++G V H YG TE+ G C ++ W+ L A ERA +RQGV
Sbjct: 300 TAGAPPSPTVIGQLSAIGITVVHVYGLTEVYGPFTICEYQDAWDDLSADERAKKLSRQGV 359
Query: 368 RTIGLTEVDIVDPE-TGL-SVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYT 425
+ +V ++D E GL V DG+T GEI++RG ++M GY KDP AT++ G ++T
Sbjct: 360 SMVQAEDVRVIDREQQGLVDVPADGETMGEILLRGNNVMAGYFKDPAATAEAFAGGWFHT 419
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+G+MHPDGY++++DR+KD+IISGGENIS+ E+E L SH V + AVVG PD W E
Sbjct: 420 GDLGVMHPDGYVQLRDRAKDIIISGGENISTVEVEQALVSHDAVLDVAVVGVPDEKWGER 479
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P A+V L G T +++I Y R + Y +P+ +VF D+LP+T+TGKV K+ L
Sbjct: 480 PRAYVLLNPGA-----TLTAEELIAYGRKMLAGYKIPRDIVFPDDLPRTSTGKVMKFEL 533
>gi|424856778|ref|ZP_18280986.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
gi|356662913|gb|EHI43092.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
Length = 534
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/542 (38%), Positives = 310/542 (57%), Gaps = 22/542 (4%)
Query: 7 NPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHV 66
+PAN PL+PL F+ER+AT D ++I+ D Y++ + +LA L S I PG
Sbjct: 7 SPANHTPLSPLRFLERSATVFPDRVAVIHGDRRYSYREFGDEVERLARVLRSR-IEPGDR 65
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V+ + PN P M HFAVP++G +F +N+RL R + IL+HS + L+FVD S L
Sbjct: 66 VAFLCPNTPEMLFAHFAVPLAGGVFIALNSRLAGRELEYILEHSGTSLLFVD---SEL-- 120
Query: 127 EVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD----PQFSW 182
V S+ + P L + EI S+ P +P Y + LA D W
Sbjct: 121 -VGSVATARAAVPSLREVI---EIPDSTIARPVVPEGITTGLYADFLAAADDVDGTLLHW 176
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
+ + +NYT GTT PKGV+ ++ ++ ++ + LWTLPMFH
Sbjct: 177 -GVDDEQQVIAINYTSGTTGKPKGVMYTHRGAYLNSLGETFHNGFTGSTKYLWTLPMFHC 235
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
NGW W T++CLR A ++ I GVTH+CGAP V + ++ +P+A +D
Sbjct: 236 NGWCTPWAVTQAAGTHICLRAVRADAIWDAIDTLGVTHLCGAPAVCSTIAEAPQAHPVD- 294
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
+RI TA +PP V+ + E++G V H YG TE+ G C ++ W++ ERASL
Sbjct: 295 ALRITTAAAPPSPTVIAQLEAIGVTVVHVYGLTEVYGPYTICEYQESWSERTPEERASLL 354
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
+RQGV + +VD + V DG+T GEIV+RG ++MLGY ++PEAT + G
Sbjct: 355 SRQGVGMVQAENARVVDAQMN-DVPADGETMGEIVLRGNNVMLGYYRNPEATEEAFAGGW 413
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
++TGD+G++HPDGY+++KDR+KD++ISGGENIS+ E+E L +HP V + AV+G P P W
Sbjct: 414 FHTGDLGVLHPDGYIQLKDRAKDIVISGGENISTIEVEQALRTHPAVLDVAVIGVPHPKW 473
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E P AFV ++ G T ++++++ R R+ ++ VP +VF ELP+T TGKV K+
Sbjct: 474 GERPKAFVIVRKGA-----TVTAEELVEHTRGRLAKFKVPDEIVFPHELPRTPTGKVLKF 528
Query: 543 VL 544
L
Sbjct: 529 EL 530
>gi|111017211|ref|YP_700183.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus jostii RHA1]
gi|110816741|gb|ABG92025.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus jostii RHA1]
Length = 534
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/541 (38%), Positives = 309/541 (57%), Gaps = 24/541 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+PL F+ER+A+ D ++++ D Y++ + +LA L S I PG V+
Sbjct: 9 ANHTPLSPLRFLERSASVFPDRIAVVHGDRRYSYREFGDEVERLARVLRSR-IEPGDRVA 67
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PN P M HFAVP++G + +N+RL R + IL+HS + L+FVD S L V
Sbjct: 68 FLCPNTPEMLFAHFAVPLAGGVLIALNSRLAGRELEYILEHSGTSLLFVD---SEL---V 121
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD-----PQFSWV 183
S+ P L + EI S+ P +P Y + LA D P V
Sbjct: 122 GSVATAREAVPSLREVI---EIPDSTIARPMVPEGIVTGMYADFLAAADDVDGTPLHWGV 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
+ + + +NYT GTT PKGV+ ++ ++ ++ + LWTLPMFH N
Sbjct: 179 DDEQQV--IAINYTSGTTGKPKGVMYTHRGAYLNSLGETFHNGFAGSTKYLWTLPMFHCN 236
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW W T++CLR A ++ I GVTH+CGAP V + ++ +P+A +D
Sbjct: 237 GWCTPWAVTQAAGTHICLRAVRADAIWDAIDTLGVTHLCGAPAVCSTIAEAPQAHPVD-A 295
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
+RI TAG+PP V+ + E++G V H YG TE+ G C ++ W+ A ERASL +
Sbjct: 296 LRITTAGAPPSPTVIAQLEAIGVTVVHVYGLTEVYGPYTICEYQDSWSDRTAEERASLLS 355
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQGV + +VD + V DG+T GEIV+RG ++MLGY +DPEAT++ G +
Sbjct: 356 RQGVGMVQAENARVVDAQMN-DVPADGETMGEIVLRGNNVMLGYYRDPEATAEAFAGGWF 414
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
+TGD+G+MH DGY+++KDR+KD++ISGGENIS+ E+E + +HP V + AVVG P P W
Sbjct: 415 HTGDLGVMHADGYIQLKDRAKDIVISGGENISTVEVEQAMMTHPAVLDVAVVGVPHPKWG 474
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E P AFV +K G T ++++++ R RI ++ VP +VF ELP+T TGKV K+
Sbjct: 475 ERPKAFVIVKKGA-----TVTAEELVEHTRGRIAKFKVPDEIVFPLELPRTPTGKVLKFE 529
Query: 544 L 544
L
Sbjct: 530 L 530
>gi|224065058|ref|XP_002301650.1| predicted protein [Populus trichocarpa]
gi|222843376|gb|EEE80923.1| predicted protein [Populus trichocarpa]
Length = 331
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/322 (57%), Positives = 227/322 (70%), Gaps = 2/322 (0%)
Query: 232 VLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-L 290
V LW+LPMFH NGW+FTWG A G TNVCLR A ++ I +H VTHMC APIV N L
Sbjct: 6 VYLWSLPMFHCNGWTFTWGVAARGGTNVCLRNTSAKDMYNNIAEHAVTHMCCAPIVFNIL 65
Query: 291 LSSSP-EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPK 349
L + P E +++ PV ILT G+PPPA +L + E LGF V+H YG TE G + C W+ K
Sbjct: 66 LEARPHERREITSPVEILTGGAPPPASLLQKIERLGFHVTHAYGLTEATGPALVCEWQKK 125
Query: 350 WNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLK 409
WNKLP +++A LKARQG+ + L + D+ D +T +SV RDG+T GEIV+RG S+M GY K
Sbjct: 126 WNKLPQQDQAKLKARQGISILTLADADVKDLDTMVSVPRDGKTMGEIVLRGSSIMKGYFK 185
Query: 410 DPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMV 469
DPEATSK ++G TGDVG++HPDGYLEIKDRSKDVIISGGENISS E+ESVLY HP V
Sbjct: 186 DPEATSKAFRNGWLATGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELESVLYRHPRV 245
Query: 470 NEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFID 529
EAAVV P P W E PCAF+S+K + E DII YC+ +PR+ VPK V F+
Sbjct: 246 LEAAVVAMPHPRWGESPCAFISVKKNSSGDTNDVKESDIIAYCKKNLPRFTVPKRVEFMA 305
Query: 530 ELPKTATGKVQKYVLGDIANSM 551
ELPKT+TGKV K L +A +
Sbjct: 306 ELPKTSTGKVLKIQLRALAQNF 327
>gi|392416776|ref|YP_006453381.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
gi|390616552|gb|AFM17702.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
Length = 535
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/536 (39%), Positives = 302/536 (56%), Gaps = 37/536 (6%)
Query: 12 CPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PLTP+ F++RA A +++ D T+++ RC +L S+L+ GI PG V+ +
Sbjct: 7 APLTPVHFLDRARRAFPHRLAVVDEDVRLTYAEFASRCDRLVSALARSGIQPGDRVAALC 66
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
N M ELH AVP GA +IN RL + IL+HS ++L L S
Sbjct: 67 ANSHIMLELHQAVPARGAALVSINVRLAVEEMHYILEHSGARL-----------LVATSE 115
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDL-- 189
F ++ EIS+ + P + D YE+ L P + + D+
Sbjct: 116 FASQAR-----------EISARTGVPA-VVAGDATGDYESWL----PDVASTADRVDVGE 159
Query: 190 -DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + +NYT GTT PKGV+ ++ ++ AV + S LWTLPMFH NGW FT
Sbjct: 160 RDLLAINYTSGTTGRPKGVMYHHRGAYLQAVAMAFHADLGPASNYLWTLPMFHCNGWCFT 219
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILT 308
W G T+VCLR+ D ++ +R+ VTH+ AP VL +++ P A QL R V + T
Sbjct: 220 WAVTAAGGTHVCLRRIDPSVIWRQLREADVTHLSAAPTVLAMIAEDPAAGQLPRRVHVDT 279
Query: 309 AGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVR 368
G+PP +L R + LGF V+H YG TE G W+P+W++L E A L+ARQG+
Sbjct: 280 GGAPPSPALLERLDPLGFDVTHLYGLTETYGPVAVNVWQPEWDRLDPTEAARLRARQGIG 339
Query: 369 TIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDV 428
I + ++D +G+ V DGQT GEI + G ++MLGY +D AT+ + G + TGD+
Sbjct: 340 NIIARPLRVLD-TSGVDVAPDGQTIGEIAVSGNNVMLGYYRDERATAAVTRSGCFLTGDL 398
Query: 429 GMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCA 488
G+MH DGY+EI+DR+KDVIISGGENI+S E+E L +HP V E+AVVG P P W E+P A
Sbjct: 399 GVMHSDGYVEIRDRAKDVIISGGENIASVELERALDTHPEVLESAVVGVPHPHWGEVPVA 458
Query: 489 FVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
FV+ +T TE ++ Y R R+ + VPK + F D LPKT+TGK+QK VL
Sbjct: 459 FVTRRTSA-----TVTEVELTTYLRERVAAFKVPKAIAFAD-LPKTSTGKIQKNVL 508
>gi|323488062|ref|ZP_08093314.1| AMP-binding enzyme [Planococcus donghaensis MPA1U2]
gi|323398214|gb|EGA91008.1| AMP-binding enzyme [Planococcus donghaensis MPA1U2]
Length = 537
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/540 (40%), Positives = 317/540 (58%), Gaps = 28/540 (5%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTPL + RA + ++I D +T+ + R QL +L + GI V+V+ PN
Sbjct: 5 LTPLDWKRRAVKYYPEKVAVIDGDKKFTYKEFGERVDQLTIALHNAGIGNKDHVAVMLPN 64
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
AM E + + GA+ +N RL + ++ ILKHS++K++ VD +L +V P
Sbjct: 65 NHAMLECFYGIIPLGAVIVPLNYRLSTKDLTYILKHSDAKMLIVDAEFGKMLEDVQDELP 124
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP-- 191
K +++ D S+ + + YE + G+ P DLD
Sbjct: 125 ----IEKYIIVAVDGFESTING-----------EDYEAFI--GNAAVDAKVPYVDLDENQ 167
Query: 192 -MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
+ LNYT GTTS+PKGV+Q ++ ++ A + L + V L TLPMFH NGW W
Sbjct: 168 MLSLNYTSGTTSSPKGVMQTHRTNYLNAANFLHHLEIKFDDVYLHTLPMFHTNGWGGVWA 227
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD--RPVRILT 308
GAT+VCLRK D P + L HG+T +CGAP V+N+L + P+AKQL+ + +R+ T
Sbjct: 228 ITAAGATHVCLRKVDPPLILDLFESHGITSLCGAPTVVNMLVNEPKAKQLELTQTIRMGT 287
Query: 309 AGSPPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AG+PP A ++ + +S LG + H YG TE + + C WK ++N L + ++AS+KARQG+
Sbjct: 288 AGAPPAAALIAKAQSILGLNMMHVYGLTETSPFILYCEWKNEFNDLDSDQQASIKARQGI 347
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGD 427
E +V+ E G V +G+ GEIV RG +M GY KDPE T++ ++DG +YTGD
Sbjct: 348 ELAFNGETKVVNQEDGKEVAWNGKELGEIVTRGNVVMAGYYKDPEKTAEAIRDGWFYTGD 407
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+ + HPDG++EI+DR KD+IISGGENISSTEIE VLY HP + E AV+ PD W E+P
Sbjct: 408 LAVTHPDGFIEIQDRIKDMIISGGENISSTEIEGVLYKHPAIAEVAVIAVPDEKWGEVPK 467
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDI 547
A + L G + TE++I+ Y R + R+ VPK+V F++ LPKTATGK+QK+ L ++
Sbjct: 468 AIIVLHQGAQA-----TEQEILDYTREHMSRFKVPKSVDFVESLPKTATGKLQKFQLREM 522
>gi|116626397|ref|YP_828553.1| AMP-dependent synthetase/ligase [Candidatus Solibacter usitatus
Ellin6076]
gi|116229559|gb|ABJ88268.1| AMP-dependent synthetase and ligase [Candidatus Solibacter usitatus
Ellin6076]
Length = 507
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/544 (39%), Positives = 318/544 (58%), Gaps = 44/544 (8%)
Query: 13 PLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAP 72
PLTPL F+ R+A+ D +++ D +T+S R A++L + G+ PG V+V+AP
Sbjct: 4 PLTPLDFLARSASTWRDRIAVVDGDRRFTYSGFAARVQGQAAALLALGVQPGDRVAVLAP 63
Query: 73 NIPAMYELHFAVPMS-GAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
N E HFA PMS GA+ +NTRL A ++ IL H +K++ VD
Sbjct: 64 NGAMALESHFA-PMSIGAVLVMLNTRLAAGELAWILNHCGAKVLLVD------------- 109
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P+L + D + P I + YE L+ P ++ V +
Sbjct: 110 -------PQLAPLVADAAV-------PHI-----IQDYEAFLSAAPPHYTPVPVTDENAC 150
Query: 192 MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGA 251
+ +NYT GTT PKGV+ ++ ++ A+ + + + ++SV LWTLPMFH NGW F W
Sbjct: 151 IAINYTSGTTGFPKGVMYTHRGAWVNALGEITEHGLTQRSVYLWTLPMFHCNGWCFPWAV 210
Query: 252 AVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL--DRPVRILTA 309
G ++C+R+ D + ALI+ GVTH+CGAP+V++ L+ A Q+ +RP+RI+TA
Sbjct: 211 TAAGGRHICIRQPDPCEMVALIQAQGVTHLCGAPVVVSSLAQYCAANQVKFERPLRIVTA 270
Query: 310 GSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVR- 368
G+PPP V+ E G + H YG TE G + C+W P+W++ PA ERA LKARQGV
Sbjct: 271 GAPPPPAVIRAAEETGAEICHAYGLTETYGPHTICSWNPEWDERPAPERALLKARQGVAY 330
Query: 369 TIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDV 428
T+ T++ +VD + V DG+T GE++MRG ++MLGY +P+AT + G +++GD+
Sbjct: 331 TVAGTDLRVVDFQMH-DVPPDGETMGEVLMRGNNVMLGYYANPKATEDAFQGGWFHSGDL 389
Query: 429 GMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCA 488
++HPDGY+E++DR KD++ISGGENISS E+E L HP V E A+V PD W E+P A
Sbjct: 390 AVVHPDGYIELRDRMKDIVISGGENISSIEVEKTLADHPAVAEVAIVAVPDEKWGEVPKA 449
Query: 489 FVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIA 548
+V LK G + T +++I +CR R+ + PK V F LP+TATGK++K L A
Sbjct: 450 YVGLKPGCSA-----TAEELIAWCRDRMAHFKAPKLVEF-GPLPRTATGKIRKNQLRAQA 503
Query: 549 NSMS 552
+ S
Sbjct: 504 KANS 507
>gi|226187606|dbj|BAH35710.1| putative fatty-acid--CoA ligase [Rhodococcus erythropolis PR4]
Length = 534
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/540 (37%), Positives = 306/540 (56%), Gaps = 22/540 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN+ PL+PL F+ER+A D ++I+ D +YT+ + LA L I PG V+
Sbjct: 9 ANNTPLSPLRFLERSAAVFPDRTAVIHGDRSYTYREFGDEVAALARVLRQR-IQPGDRVA 67
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+APN+P M HFAVP++G + +N+RL + IL HS + ++FVD S + V
Sbjct: 68 YLAPNVPEMLFAHFAVPLAGGVLIALNSRLAGPELEYILDHSGTTILFVD---SEFVGSV 124
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG----DPQFSWVR 184
S + + + EI + P P +P Y +++A+G D W
Sbjct: 125 TS------SKANVTSLREIIEIPDFTVPSPEVPTGIVTGQYADLIAEGQALTDQPLHW-G 177
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
+ + +NYT GTT PKGV+ ++ ++ ++ + LWTLPMFH NG
Sbjct: 178 VDDEQQCIAINYTSGTTGKPKGVMYSHRGAYLNSLGETFHNGFDGSTKYLWTLPMFHCNG 237
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPV 304
W W T++CLR A ++ I GVTH+CGAP V + ++ + +A +++ +
Sbjct: 238 WCTPWAVTQAAGTHICLRAVRADAIWDAIDNLGVTHLCGAPTVCSTIADADQAHKVE-AL 296
Query: 305 RILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
RI TAG+PP ++ + E +G V H YG TE+ G C ++ W+ P ERA+L +R
Sbjct: 297 RITTAGAPPSPTIIGKLEDIGVTVVHVYGLTEVYGPYTICEYQEAWDDKPQSERAALLSR 356
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYY 424
QGV + +VD E V DGQT GEIV+RG ++MLGY +D AT++ G ++
Sbjct: 357 QGVGMVQAENARVVDAEMN-DVPADGQTMGEIVLRGNNVMLGYYRDEAATAEAFAGGWFH 415
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
+GD+G+MHPDGY+++KDR+KD+IISGGENIS+ E+E + SHP V + AVVG PD W E
Sbjct: 416 SGDLGVMHPDGYIQLKDRAKDIIISGGENISTVEVEQAIMSHPAVIDVAVVGVPDEKWGE 475
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P AFV L G+ + +DI+++ RA + Y VP+ +VF +LP+T TGKV K+ L
Sbjct: 476 RPKAFVVLGK-----GLQASAEDIVEHTRALLAGYKVPRDIVFPLDLPRTPTGKVLKFQL 530
>gi|385675727|ref|ZP_10049655.1| o-succinylbenzoate--CoA ligase [Amycolatopsis sp. ATCC 39116]
Length = 537
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/532 (38%), Positives = 295/532 (55%), Gaps = 17/532 (3%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTPL F+ R+A ++++ D +T+ + R + A L + G+ PG V+ + PN
Sbjct: 8 LTPLSFLRRSANVHAGKVAVVHGDEAWTYREFAARVERRARMLRAAGVRPGDRVAYLMPN 67
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
+P M HFAVP++GA+ INTRL + IL HS + ++ VD ++ + +
Sbjct: 68 VPEMLAAHFAVPLAGAVLVAINTRLAPEEVRYILDHSGATVLVVDAEYAATIAPIAGSL- 126
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIP-PADFVDTYENMLAKGDPQFSWVRPKSDLDPM 192
T + + + D P + P A + + W + P+
Sbjct: 127 ---DTVRTIAVAAD-----PIGPEATVEVPGAVAFADLLAAADEEDELVWA-VDDERSPI 177
Query: 193 VLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAA 252
+NYT GTT PKGVV ++ ++ + + SV LWTLPMFH NGW TW
Sbjct: 178 SINYTSGTTGRPKGVVYTHRGAYLNSFGEIFHSGHDADSVYLWTLPMFHCNGWCTTWALV 237
Query: 253 VVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSP 312
G T +CLR+ V+ LI +H VTH+ GAP V+ + + A QLD + + TAG+P
Sbjct: 238 AAGGTQICLREVRGDRVWELIDRHRVTHLNGAPTVVTTIMRAEPAHQLDHRLVVTTAGAP 297
Query: 313 PPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGL 372
P +L+ E +GF + H YG TE G ++ W+ L ERA L+ARQGV +
Sbjct: 298 PSPTTILQMERMGFRIVHVYGLTETYGPYAVNEYQRAWDDLAPEERAKLRARQGVGMLQA 357
Query: 373 TEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMH 432
EV +VD V RDG+T GEIVMRG ++M GY DPE T + G +++GD+G+MH
Sbjct: 358 DEVRVVDGNL-RDVPRDGRTMGEIVMRGNNVMQGYFNDPEGTERAFAGGWFHSGDLGVMH 416
Query: 433 PDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSL 492
PDGY+E++DR+KDVIISGGENIS+ E+E + +HP V E AV+G PDP W E P AFV
Sbjct: 417 PDGYVELRDRAKDVIISGGENISTIEVEHAIAAHPDVLEVAVIGVPDPRWGERPKAFVVP 476
Query: 493 KTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
+ G + +E ++I + R+ I RY P+ V + ELPKT+TGKV+KY L
Sbjct: 477 RPGRNP-----SESELIAHVRSLIARYKAPREVEIVAELPKTSTGKVRKYEL 523
>gi|356540860|ref|XP_003538902.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Glycine max]
Length = 541
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/537 (40%), Positives = 321/537 (59%), Gaps = 25/537 (4%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL+P+ F+E AAT D SIIY+ + ++W QT+ RC++LAS+L + GI+ +V+ +A
Sbjct: 7 PLSPISFLEGAATNYGDKISIIYHHNVRFSWRQTHERCVKLASALVNLGISHNDMVTALA 66
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSE-SKLVFVDH-LSSSLLLEVV 129
PNIPA+YELHF VPM+G + + +NT+LD T++++L+ E K++FVD+ L S L
Sbjct: 67 PNIPALYELHFGVPMAGGVLSALNTQLDVTTLALLLEQLEPCKIMFVDYQLIDSALKACE 126
Query: 130 SLFPPHSKTPKLVLITD-DKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
L K P +VLI + D+E S + IPP Y ++A G F ++P ++
Sbjct: 127 ILSHRKCKPPIIVLIPNYDQEQSFLAK---NIPPGTL--NYNELIAIGKKDFEALKPNNE 181
Query: 189 LDPMVLNYTWGTTSA-PKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSF 247
+P+ +NYT G+T PKGVV +++ ++ ++ ++ + + + V LWT+ MF NGW F
Sbjct: 182 CNPISVNYTSGSTGILPKGVVYSHRSAYLNSLAAIARFEMKQLPVFLWTVDMFRCNGWCF 241
Query: 248 TWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP--VR 305
W + +G TN+CLR A ++ I + VT CGAP +L++++++ + Q P V
Sbjct: 242 PWAMSAIGGTNICLRNVSAKGIYDAIYLYKVTQFCGAPTLLDMIANASPSDQRPLPHRVN 301
Query: 306 ILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
+ AG PP VL + LGF V+ GYG TE G + W P + K
Sbjct: 302 VTVAGVLPPFHVLNKVSQLGFDVNIGYGMTETLGPVIVRPWNPN------SDGEHTKLNY 355
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYT 425
GV +VD+ DPETG S DG+T GEI+ +G +LMLGYLK+ +A K + G Y T
Sbjct: 356 GVSEF-RQDVDVKDPETGESTPHDGKTIGEIMFKGNALMLGYLKNSQANDKAFRGGWYRT 414
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+ + P+G + +KDR+KDVI S GE +SS E+E+VL +HP V +AAVVGR D E
Sbjct: 415 GDLAVREPNGSITMKDRAKDVIYSKGEVVSSLEVEAVLLNHPKVLKAAVVGRCDECLVES 474
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
CA V LK G + T ++II++C + +MVP TVVF D LP +TGKVQK+
Sbjct: 475 LCAIVKLKDGCSA-----TVEEIIKFCEDHLATHMVPSTVVFGD-LPVNSTGKVQKF 525
>gi|397729293|ref|ZP_10496080.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
gi|396934900|gb|EJJ02023.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
Length = 534
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/541 (38%), Positives = 307/541 (56%), Gaps = 24/541 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+PL F+ER+A+ D ++++ D Y++ + +LA L S I PG V+
Sbjct: 9 ANHTPLSPLRFLERSASVFPDRIAVVHGDRRYSYREFGDEVERLARVLRSR-IEPGDRVA 67
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PN P M HFAVP++G + +N+RL R + IL+HS + L+FVD S L V
Sbjct: 68 FLCPNTPEMLFAHFAVPLAGGVLIALNSRLAGRELEYILEHSGTSLLFVD---SEL---V 121
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD-----PQFSWV 183
S+ P L + EI S+ P +P Y + LA D P V
Sbjct: 122 GSVATAREAVPSLREVI---EIPDSTIARPVVPEGIVTGMYADFLAAADDVDGTPLHWGV 178
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
+ + + +NYT GTT PKGV+ ++ ++ ++ + LWTLPMFH N
Sbjct: 179 DDEQQV--IAINYTSGTTGKPKGVMYTHRGAYLNSLGETFHNGFTGSTKYLWTLPMFHCN 236
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW W T++CLR A ++ I GVTH+CGAP V + ++ +P+A +D
Sbjct: 237 GWCTPWAVTQAAGTHICLRAVRADAIWDAIDTLGVTHLCGAPAVCSTIAEAPQAHPVD-A 295
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
+RI TAG+PP V+ + E++G V H YG TE G C ++ W+ A ERASL +
Sbjct: 296 LRITTAGAPPSPTVIAQLEAIGVTVVHVYGLTEAYGPYTICEYQDSWSDRTAEERASLLS 355
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQGV + +VD V DG+T GEIV+RG ++MLGY +DPEAT++ G +
Sbjct: 356 RQGVGMVQAENARVVDAHMN-DVPADGETMGEIVLRGNNVMLGYYRDPEATAEAFAGGWF 414
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
+TGD+G+MH DGY+++KDR+KD++ISGGENIS+ E+E + +HP V + AVVG P P W
Sbjct: 415 HTGDLGVMHADGYIQLKDRAKDIVISGGENISTVEVEQAMMTHPAVLDVAVVGVPHPKWG 474
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E P AFV +K G T ++++++ R RI ++ VP +VF ELP+T TGKV K+
Sbjct: 475 ERPKAFVIVKKGA-----TVTAEELVEHTRGRIAKFKVPDEIVFPLELPRTPTGKVLKFE 529
Query: 544 L 544
L
Sbjct: 530 L 530
>gi|456014270|gb|EMF47885.1| Long-chain-fatty-acid--CoA ligase [Planococcus halocryophilus Or1]
Length = 531
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/540 (39%), Positives = 317/540 (58%), Gaps = 28/540 (5%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTPL + RA + ++I D +T+ + +R QL ++L + GI V+V+ PN
Sbjct: 5 LTPLDWKRRAVKYYPEKVAVIDGDKKFTYKEFGKRVDQLTTALHNAGIGNKDHVAVMLPN 64
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
AM E + + GA+ +N RL + ++ ILKHS++K++ VD +L +V P
Sbjct: 65 NHAMLECFYGIIPLGAVIVPLNYRLSTKDLTYILKHSDAKMLIVDAEFGKMLEKVQDELP 124
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP-- 191
K +++ D S+ + + YE + G+ P DLD
Sbjct: 125 ----IEKYIVVAVDGFESTING-----------EDYEAFI--GNVPDDAKVPHIDLDENQ 167
Query: 192 -MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
+ LNYT GTTS+PKGV+Q ++ ++ A + L + V L TLPMFH NGW W
Sbjct: 168 MLSLNYTSGTTSSPKGVMQTHRTNYLNAANFLHHLEIKFDDVYLHTLPMFHTNGWGGVWA 227
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD--RPVRILT 308
GAT+VCLRK D P + L HG+T +CGAP V+N+L + P+AK+++ + +R+ T
Sbjct: 228 ITAAGATHVCLRKVDPPLILDLFESHGITSLCGAPTVVNMLVNEPKAKEIELTQTIRMGT 287
Query: 309 AGSPPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AG+PP A ++ + +S LG + H YG TE + + C WK ++N L ++AS+KARQG+
Sbjct: 288 AGAPPAAALIAKAQSILGLNMMHVYGLTETSPFILYCEWKNEFNDLDPEQQASIKARQGI 347
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGD 427
E +V+ E G V +G+ GEIV RG +M GY KDPE T++ ++DG +YTGD
Sbjct: 348 ELAFNGETKVVNQENGEEVAWNGKELGEIVTRGNVVMAGYYKDPEKTAEAIRDGWFYTGD 407
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+ + HPDGY+EI+DR KD+IISGGENISSTEIE VLY HP + E AV+ PD W E+P
Sbjct: 408 LAVTHPDGYIEIQDRIKDMIISGGENISSTEIEGVLYKHPAIAEVAVIAVPDEKWGEVPK 467
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDI 547
A + L G TE++I+ Y R + R+ VPK+V F++ LPKTATGK+QK+ L ++
Sbjct: 468 AIIVLHQGA-----QVTEQEILDYTRENMSRFKVPKSVDFVEALPKTATGKLQKFQLREM 522
>gi|229488762|ref|ZP_04382628.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus erythropolis
SK121]
gi|229324266|gb|EEN90021.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus erythropolis
SK121]
Length = 534
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/540 (37%), Positives = 306/540 (56%), Gaps = 22/540 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN+ PL+PL F+ER+A + ++++ D TY++ + LA L I PG V+
Sbjct: 9 ANNTPLSPLRFLERSAAVFPERTAVVHGDRTYSYREFGDEVAALARVLRER-IQPGDRVA 67
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+APN+P M HFAVP++G + +N+RL + IL HS + ++FVD S + V
Sbjct: 68 YLAPNVPEMLFAHFAVPLAGGVLIALNSRLAGPELEYILDHSGTTILFVD---SEFVGSV 124
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG----DPQFSWVR 184
S ++V EI S+ P P +P Y +++A+G D W
Sbjct: 125 TSSKANVESLREIV------EIPDSTVPYPDVPTGIVTGQYADLIAEGEALSDQPLHW-G 177
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
+ + +NYT GTT PKGV+ ++ ++ ++ + LWTLPMFH NG
Sbjct: 178 VDDEQQCIAINYTSGTTGKPKGVMYSHRGAYLNSLGETFHNGFDGATKYLWTLPMFHCNG 237
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPV 304
W W T++CLR A ++ I GVTH+CGAP V + ++ + +A ++D +
Sbjct: 238 WCTPWAVTQAAGTHICLRAVRADAIWDAIDNLGVTHLCGAPTVCSTIADADQAHKVD-AL 296
Query: 305 RILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
RI TAG+PP ++ + E +G V H YG TE+ G C ++ W+ P ERA+L +R
Sbjct: 297 RITTAGAPPSPTIIGKLEDIGVTVVHVYGLTEVYGPYTICEYQEAWDDKPQSERAALLSR 356
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYY 424
QGV + +VD E V DGQT GEIV+RG ++MLGY +D AT++ G ++
Sbjct: 357 QGVGMVQAENARVVDAEMN-DVPADGQTMGEIVLRGNNVMLGYYRDEAATAEAFAGGWFH 415
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
+GD+G+MHPDGY+++KDR+KD+IISGGENIS+ E+E + SHP V + AVVG PD W E
Sbjct: 416 SGDLGVMHPDGYIQLKDRAKDIIISGGENISTVEVEQAIMSHPAVIDVAVVGVPDEKWGE 475
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P AFV L G+ + +DI+++ R + Y VP+ +VF +LP+T TGKV K+ L
Sbjct: 476 RPKAFVVLGK-----GLQASAEDIVEHTRTLLAGYKVPRDIVFPLDLPRTPTGKVLKFQL 530
>gi|453070047|ref|ZP_21973299.1| fatty-acid--CoA ligase [Rhodococcus qingshengii BKS 20-40]
gi|452761693|gb|EME19992.1| fatty-acid--CoA ligase [Rhodococcus qingshengii BKS 20-40]
Length = 534
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/540 (37%), Positives = 306/540 (56%), Gaps = 22/540 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN+ PL+PL F+ER+A + ++++ D TY++ + LA L I PG V+
Sbjct: 9 ANNTPLSPLRFLERSAAVFPERTAVVHGDRTYSYREFGDEVAALARVLRER-IQPGDRVA 67
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+APN+P M HFAVP++G + +N+RL + IL HS + ++FVD S + V
Sbjct: 68 YLAPNVPEMLFAHFAVPLAGGVLIALNSRLAGPELEYILDHSGTTILFVD---SEFVGSV 124
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG----DPQFSWVR 184
S ++V EI S+ P P +P Y +++A+G D W
Sbjct: 125 TSSKANVGSLREIV------EIPDSTVPYPDVPTGIVTGQYADLIAEGEALSDQPLHW-G 177
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
+ + +NYT GTT PKGV+ ++ ++ ++ + LWTLPMFH NG
Sbjct: 178 VDDEQQCIAINYTSGTTGKPKGVMYSHRGAYLNSLGETFHNGFDGATKYLWTLPMFHCNG 237
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPV 304
W W T++CLR A ++ I GVTH+CGAP V + ++ + +A ++D +
Sbjct: 238 WCTPWAVTQAAGTHICLRAVRADAIWDAIDNLGVTHLCGAPTVCSTIADADQAHKVD-AL 296
Query: 305 RILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
RI TAG+PP ++ + E +G V H YG TE+ G C ++ W+ P ERA+L +R
Sbjct: 297 RITTAGAPPSPTIIGKLEDIGVTVVHVYGLTEVYGPYTICEYQEAWDDKPQSERAALLSR 356
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYY 424
QGV + +VD E + DGQT GEIV+RG ++MLGY +D AT++ G ++
Sbjct: 357 QGVGMVQAENARVVDAEMN-DIPADGQTMGEIVLRGNNVMLGYYRDEAATAEAFAGGWFH 415
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
+GD+G+MHPDGY+++KDR+KD+IISGGENIS+ E+E + SHP V + AVVG PD W E
Sbjct: 416 SGDLGVMHPDGYIQLKDRAKDIIISGGENISTVEVEQAIMSHPAVIDVAVVGVPDEKWGE 475
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P AFV L G+ + +DI+++ R + Y VP+ +VF +LP+T TGKV K+ L
Sbjct: 476 RPKAFVVLGK-----GLQASAEDIVEHTRTLLAGYKVPRDIVFPLDLPRTPTGKVLKFQL 530
>gi|325677215|ref|ZP_08156881.1| AMP-binding enzyme family protein [Rhodococcus equi ATCC 33707]
gi|325551912|gb|EGD21608.1| AMP-binding enzyme family protein [Rhodococcus equi ATCC 33707]
Length = 533
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/540 (38%), Positives = 306/540 (56%), Gaps = 22/540 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+PL F++R+AT D +I++ D YT+ + +LA L S I PG ++
Sbjct: 8 ANHTPLSPLRFLDRSATVFPDKTAIVHGDRRYTYREFADEVARLARVLRSR-IEPGDRIA 66
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PN P M HFAVP++G + +N+RL + IL H+ K++FVD S L+ V
Sbjct: 67 YLCPNTPEMLMAHFAVPLAGGVLVALNSRLAGPELEYILDHAGVKILFVD---SELVGSV 123
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENML----AKGDPQFSWVR 184
++ ++V EI S+ P P +P Y+ L D W
Sbjct: 124 RTVRENVGSVVEIV------EIPDSTVPYPDVPAGVATARYDEFLTNRDGAADAPLHW-G 176
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
+ + +NYT GTT PKGV+ ++ ++ ++ + LWTLPMFH NG
Sbjct: 177 VDDEQQVIAINYTSGTTGKPKGVMYSHRGAYLNSLGETFHNGFDGSTKYLWTLPMFHCNG 236
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPV 304
W W T+VCLR A V+ I G+T++CGAP V ++ S A ++D +
Sbjct: 237 WCTPWAVTAAAGTHVCLRAVRADAVWDAIDDLGITNLCGAPAVCTTIAGSERAHRVD-AL 295
Query: 305 RILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
RI TAG+PP V+ + E+LG V H YG TE+ G C ++ W+ ERA+L +R
Sbjct: 296 RITTAGAPPSPTVIGQLEALGITVVHVYGLTEVYGPYTICEYQQAWDDCSPEERAALISR 355
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYY 424
QGV + +VD E V DG+T GEIV+RG ++MLGY +DP+AT++ G ++
Sbjct: 356 QGVGMVQAENARVVD-ENMADVPADGETMGEIVLRGNNVMLGYYRDPDATAEAFAGGWFH 414
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
TGD+G+MHPDGY+++KDR+KD++ISGGENIS+ E+E + +HP V + AVVG P W E
Sbjct: 415 TGDLGVMHPDGYIQLKDRAKDIVISGGENISTVEVEQAIMAHPAVLDVAVVGVPHEKWGE 474
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P A+V LK G + T ++II++ R+RI R+ VP+ +VF +LP+T TGKV K+ L
Sbjct: 475 RPKAYVILKKGAAA-----TAEEIIEHTRSRIARFKVPEEIVFPLDLPRTPTGKVLKFEL 529
>gi|312141566|ref|YP_004008902.1| acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
gi|311890905|emb|CBH50224.1| putative acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
Length = 533
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/540 (38%), Positives = 307/540 (56%), Gaps = 22/540 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+PL F++R+AT D +I++ D YT+ + +LA L S I PG ++
Sbjct: 8 ANHTPLSPLRFLDRSATVFPDKTAIVHGDRRYTYREFADEVARLARVLRSR-IEPGDRIA 66
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PN P M HFAVP++G + +N+RL + IL H+ K++FVD S L+ V
Sbjct: 67 YLCPNTPEMLMAHFAVPLAGGVLVALNSRLAGPELEYILDHAGVKILFVD---SELVGSV 123
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENML----AKGDPQFSWVR 184
++ + +T+ EI S+ P P +P Y+ L D W
Sbjct: 124 RTV------RENVGSVTEIVEIPDSTIPYPDVPAGVATARYDEYLTNRDGAADAPLHW-G 176
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
+ + +NYT GTT PKGV+ ++ ++ ++ + LWTLPMFH NG
Sbjct: 177 VDDEQQVIAINYTSGTTGKPKGVMYSHRGAYLNSLGETFHNGFDGSTKYLWTLPMFHCNG 236
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPV 304
W W T+VCLR A V+ I G+T++CGAP V ++ + A ++D +
Sbjct: 237 WCTPWAVTAAAGTHVCLRAVRADAVWDAIDDLGITNLCGAPAVCTTIAGAERAHRVD-AL 295
Query: 305 RILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
RI TAG+PP V+ + E+LG V H YG TE+ G C ++ W+ ERA+L +R
Sbjct: 296 RITTAGAPPSPTVIGQLEALGITVVHVYGLTEVYGPYTICEYQQAWDDCSPEERAALISR 355
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYY 424
QGV + +VD E V DG+T GEIV+RG ++MLGY +DP+AT++ G ++
Sbjct: 356 QGVGMVQAENARVVD-ENMADVPADGETMGEIVLRGNNVMLGYYRDPDATAEAFAGGWFH 414
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
TGD+G+MHPDGY+++KDR+KD++ISGGENIS+ E+E + +HP V + AVVG P W E
Sbjct: 415 TGDLGVMHPDGYIQLKDRAKDIVISGGENISTVEVEQAIMAHPAVLDVAVVGVPHEKWGE 474
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P A+V LK G + T ++II++ R+RI R+ VP+ +VF +LP+T TGKV K+ L
Sbjct: 475 RPKAYVILKKGAAA-----TAEEIIEHTRSRIARFKVPEEIVFPLDLPRTPTGKVLKFEL 529
>gi|403723397|ref|ZP_10945608.1| putative fatty-acid--CoA ligase [Gordonia rhizosphera NBRC 16068]
gi|403206058|dbj|GAB89939.1| putative fatty-acid--CoA ligase [Gordonia rhizosphera NBRC 16068]
Length = 545
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/541 (39%), Positives = 301/541 (55%), Gaps = 21/541 (3%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
N L+PL F++R+A D +I+Y +T+++ +LA L S I+ G V+
Sbjct: 13 NRSELSPLRFLDRSAEVFPDRDAILYGSRRWTYAEFADETQRLARVLRSH-IDDGARVAF 71
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+ PNIP HFAVP++G + +N+RL + IL+HSE+ +F D + +
Sbjct: 72 LTPNIPETLIAHFAVPLAGGVLVALNSRLAGPELVYILEHSEATTLFFDSEFRHTVATIA 131
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADF--VDTYENMLAKGDPQ----FSWV 183
P V ITDD+ P + + + +Y + L++ D WV
Sbjct: 132 DQLP---DLETFVEITDDE----FGHPLGDVAASGIGGLVSYPDYLSRADDLDPTPLPWV 184
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
D + LNYT GTT PKGV+ ++ ++ + S LWTLPMFH N
Sbjct: 185 VDDEDR-VIALNYTSGTTGKPKGVMYTHRGAYLNSFGETFHNQFTGSSRYLWTLPMFHCN 243
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW W G T+VCLR A V+ I GVTHMCGAP V ++ SP A +LDRP
Sbjct: 244 GWCTPWAVTHAGGTHVCLRAVRAEAVWDGIDDLGVTHMCGAPTVCTTIAGSPRAHRLDRP 303
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
+RI TAG+PP V+ + E+LG V H YG TE+ G C ++ W+ L ERA+ +
Sbjct: 304 LRITTAGAPPSPTVIGQLEALGVTVVHVYGLTEVYGPYTICEYQEAWDDLTPPERAAKLS 363
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQGV + +VD E + V DG+T GEIV+RG ++M GY KDP+AT++ G +
Sbjct: 364 RQGVGMVQAERARVVD-ENMVDVPADGETMGEIVLRGNNVMAGYYKDPDATAEAFAGGWF 422
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
++GD+G+MHPDGY+++KDR+KD+IISGGENIS+ E+E L SH V + AVVG PD W
Sbjct: 423 HSGDLGVMHPDGYIQLKDRAKDIIISGGENISTVEVEQALVSHDSVLDVAVVGVPDEKWG 482
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E P A+V LK G T ++I Y R + Y VP+ +VF ++LP+T TGKV K+
Sbjct: 483 ERPRAYVLLKPGE-----TLTADELIAYARKLLAGYKVPRDIVFAEDLPRTPTGKVLKFE 537
Query: 544 L 544
L
Sbjct: 538 L 538
>gi|295696743|ref|YP_003589981.1| AMP-dependent synthetase and ligase [Kyrpidia tusciae DSM 2912]
gi|295412345|gb|ADG06837.1| AMP-dependent synthetase and ligase [Kyrpidia tusciae DSM 2912]
Length = 529
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/537 (39%), Positives = 308/537 (57%), Gaps = 29/537 (5%)
Query: 13 PLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAP 72
PLTPL + RA D ++I D +T+ Q R +L+++L G+ G V+V+ P
Sbjct: 4 PLTPLDWKRRAVKLYPDKIAVIDEDKRFTYRQFDDRVNRLSNALRKLGVAAGTKVAVMVP 63
Query: 73 NIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLF 132
N M E + + GA+ +N RL+ + ++ HS+S++V VD + ++ S
Sbjct: 64 NTHPMLECFYGICQMGAVIVPLNIRLNPDELGYVIDHSDSEVVIVDAEWGDRIHDIRSRL 123
Query: 133 PPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPM 192
P I D +SS P + +D YE +LA+ P + + + D + M
Sbjct: 124 PQVRH-----YIQIDSGLSS---------PLEAMD-YETLLAESSP--APIHVEIDENQM 166
Query: 193 V-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGA 251
+ +NYT GTTS PKGV+ ++ ++ A D L+ V V L TLPMFH NGW W
Sbjct: 167 ISINYTSGTTSKPKGVIMTHRGNYLNAADFLLHLRVSHDDVYLHTLPMFHANGWGGVWAI 226
Query: 252 AVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL---DRPVRILT 308
VGAT+VCLRK D + L K G+T CGAP VLN+L +P +Q+ RP R+ T
Sbjct: 227 TAVGATHVCLRKVDPEKILNLYEKEGITLACGAPTVLNMLVQAPNLEQVRIATRP-RMGT 285
Query: 309 AGSPPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AGSPPPA ++ R + L V H YG TE + C W+ +++ L E+A +KARQGV
Sbjct: 286 AGSPPPAAIIDRVQKYLHMEVIHVYGLTETSPFISYCEWRKEFDNLLPEEQAIVKARQGV 345
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGD 427
+ E +V E G V+ +G+ GEIV RG +M GY K PE T++ ++DG +++GD
Sbjct: 346 EMVFSGETKVVR-EDGSDVEWNGREIGEIVARGNVVMEGYYKQPEETARAIRDGWFHSGD 404
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+ ++HP+G++EI DR KDVIISGGENISS E+E VLY HP V + VV RPD W E+P
Sbjct: 405 LAVVHPNGFIEIVDRLKDVIISGGENISSVEVEGVLYQHPAVADVGVVARPDERWGEVPV 464
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
A V +K G T +++ ++CRAR+ + PK F+DELP+TATGK+QK+ L
Sbjct: 465 ALVVVKP-----GHQVTAEELNEFCRARLAHFKCPKDYEFVDELPRTATGKLQKFKL 516
>gi|184201740|ref|YP_001855947.1| putative fatty-acid--CoA ligase [Kocuria rhizophila DC2201]
gi|183581970|dbj|BAG30441.1| putative fatty-acid--CoA ligase [Kocuria rhizophila DC2201]
Length = 571
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/583 (36%), Positives = 314/583 (53%), Gaps = 59/583 (10%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSL----------SS 58
AN+ PLTPL F+ER+A D ++++ +++ Q R + A++L SS
Sbjct: 3 ANTEPLTPLRFLERSAEVFPDRRAVVHGSQEWSYRQFDRDVQRFAAALRPLLADAPAESS 62
Query: 59 FGINPGH-------------------------VVSVIAPNIPAMYELHFAVPMSGAIFNT 93
G V+V+APN+PA H+AVP +GA+
Sbjct: 63 GATGEGDRSNGAGRRAAEEDFQGAEFLEREWPTVAVVAPNVPAALMAHYAVPAAGAVLVP 122
Query: 94 INTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSS 153
+N RL AR + IL+H +++V D +L+ V+ +LV + D++ +
Sbjct: 123 LNPRLSARELQYILEHCGARVVLAD----VSVLDTVAEAMGDRTGVRLVQVPDEQ----A 174
Query: 154 SSPPPRIPPADFVDTYENML-------AKGDPQFSWVRPKSDLD---PMVLNYTWGTTSA 203
P R V T+E L + V + +D P+ LNYT GTT
Sbjct: 175 GLPAVRDGAGAGVPTFEEFLDAPVRHAGSAEKTDGGVVRRGVVDENAPITLNYTSGTTGR 234
Query: 204 PKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRK 263
PKGV+ ++ ++ ++ + + LWTLPMFH NGW TW G T+VCLR
Sbjct: 235 PKGVLYSHRGAYLNSLGEVFHNGFTGDTRYLWTLPMFHCNGWCTTWAVTAAGGTHVCLRA 294
Query: 264 FDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTES 323
A V++ +H +TH+CGAP V + + + EA LDR +RI TAG+PP ++ R E
Sbjct: 295 VRAQDVWSAFDEHAITHLCGAPAVCSTIVDAQEAHPLDRRIRITTAGAPPAPSIIERLEQ 354
Query: 324 LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETG 383
GF + H YG TE+ G C + +W +LPA ERA +RQGV I +VDPE
Sbjct: 355 AGFDIVHVYGLTEVFGPITICEPQEQWAELPASERARQMSRQGVAMIQAESARVVDPEM- 413
Query: 384 LSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRS 443
V DG++ GE+V+RG ++M+GY +D AT K G ++TGD+G+MHP+GY+++ DR+
Sbjct: 414 QDVPADGESLGEVVLRGNNVMIGYYRDVTATRKAFDGGWFHTGDLGVMHPNGYIQLTDRA 473
Query: 444 KDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMT 503
KDVIISGGENISS E+E LYSHP V + AVVG P W E P A V +GG
Sbjct: 474 KDVIISGGENISSIEVEQALYSHPDVLDVAVVGVPHEKWGERPVAHV-----VRAGGSTV 528
Query: 504 TEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGD 546
TE+ + ++ R+++ + VP +V F DELP+TATGKV+K +L D
Sbjct: 529 TEEQLREHVRSQLSGFKVPDSVTFTDELPRTATGKVRKNLLRD 571
>gi|444431474|ref|ZP_21226639.1| putative fatty-acid--CoA ligase [Gordonia soli NBRC 108243]
gi|443887580|dbj|GAC68360.1| putative fatty-acid--CoA ligase [Gordonia soli NBRC 108243]
Length = 529
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 207/542 (38%), Positives = 299/542 (55%), Gaps = 36/542 (6%)
Query: 6 PNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGH 65
P P PLTP F++RAA D +I+ D T+ + +RR ++ L S G+ G
Sbjct: 12 PAPFTFAPLTPASFLDRAAAVFADRTAIVDGDRRLTYREFHRRVGRVTGVLESLGVGAGD 71
Query: 66 VVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL 125
V+ + N M ELH AVP+ G++ +N RL R ++ IL HS +++L
Sbjct: 72 RVAALCANSHVMLELHSAVPVHGSVLVPLNIRLSERELTYILSHS----------GAAVL 121
Query: 126 LEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPA---DFVDTYENMLAKGDPQFSW 182
+ V D+ + + R+ A D D YE +LA+ D
Sbjct: 122 IATVEFA--------------DRARAVGEAVGVRVLVAGEVDGRDEYEELLARADEPVR- 166
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
R + + +NYT GTT PKGV+ ++ ++ ++ + + LWTLPMFH
Sbjct: 167 -REPEERGLLAINYTSGTTGRPKGVMYHHRGAYLQSLAMAHHAGLGPATNYLWTLPMFHC 225
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
+GW FTW G T+VCLR D ++ + + G+TH AP VL +++ P A++LDR
Sbjct: 226 DGWCFTWAVTAAGGTHVCLRAIDPGQIWRHLTEDGITHFSAAPTVLTMIAEDPTARRLDR 285
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
V T G+PP +L R LG V+H YG TE G V W+P+W+ +RA
Sbjct: 286 TVAAGTGGAPPSPALLSRMTRLGIDVTHLYGMTETFGPIVVNQWQPEWDGGTDDDRAVRS 345
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
ARQG+ I V +V + G V DG+T GE+++RG +MLGY +DP+AT+ +D
Sbjct: 346 ARQGIGNIASGRVRVVAGD-GTDVAADGETTGELLVRGNIVMLGYYRDPDATAAASQDSW 404
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
TGD+ +MHPDGY+EI+DRSKDVIISGGENI+S EIE VL +HP V E+AVVGR D W
Sbjct: 405 LRTGDIAVMHPDGYVEIQDRSKDVIISGGENIASVEIERVLDAHPDVVESAVVGRADERW 464
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E+P A+V+++ G + D++ + R + R+ VPK +VF D LPKT+TGK+QK
Sbjct: 465 GEVPVAYVTVRAGA-----RVSTDDLLDHVRRELARFKVPKEIVFAD-LPKTSTGKIQKN 518
Query: 543 VL 544
VL
Sbjct: 519 VL 520
>gi|389817162|ref|ZP_10207944.1| AMP-binding protein [Planococcus antarcticus DSM 14505]
gi|388464738|gb|EIM07066.1| AMP-binding protein [Planococcus antarcticus DSM 14505]
Length = 531
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 209/540 (38%), Positives = 318/540 (58%), Gaps = 28/540 (5%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTPL + RA + ++I D +T+ + R +L+ +L + GI V+V+ PN
Sbjct: 5 LTPLDWKRRAVKYYPEKVAVIDGDKKFTYKEFGNRVDRLSVALHNAGITEKDHVAVMLPN 64
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
M E + +P GA+ +N RL + ++ ILKHS++K++ VD L+ E+ + P
Sbjct: 65 SHTMLECFYGIPPLGAVIVPLNYRLSTKDLAYILKHSDAKMLIVDAEFGKLIEEIQNELP 124
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP-- 191
K +++ + S + F++ P+ + + P ++LD
Sbjct: 125 ----IEKYIIVA----VEGCESAIKGVDYEHFINDV--------PENAKI-PTAELDENQ 167
Query: 192 -MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
+ LNYT GTTS PKGV+Q ++ ++ A + L + V L TLPMFH NGW W
Sbjct: 168 MLSLNYTSGTTSNPKGVMQTHRTNYMNAANFLHHLEIKYDDVYLHTLPMFHTNGWGGVWA 227
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD--RPVRILT 308
GAT+VCLRK D + L HG+T +CGAP V+N+L + P+AK+++ + +R+ T
Sbjct: 228 ITAAGATHVCLRKVDPSLILDLFESHGITALCGAPTVVNMLVNEPKAKEIELTQKIRMGT 287
Query: 309 AGSPPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AG+PP A ++ + +S LG + H YG TE + + C WK ++N+L ++AS+KARQG+
Sbjct: 288 AGAPPAAALIAKAQSILGLNMMHVYGLTETSPFILYCEWKNEFNELDPDQQASIKARQGI 347
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGD 427
E +V+ E G V +G+ GEIV RG +M GY KDPE T++ ++DG +YTGD
Sbjct: 348 ELAFNGETKVVNQEDGEEVAWNGKELGEIVTRGNVVMAGYYKDPEKTAEAIRDGWFYTGD 407
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+ + HPDG++EI+DR KD+IISGGENISSTEIE VLY HP + E AV+ PD W E+P
Sbjct: 408 LAVTHPDGFIEIQDRIKDMIISGGENISSTEIEGVLYKHPAIAEVAVIAVPDEKWGEVPK 467
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDI 547
A + L G + TE++I+ Y R + R+ VPK+V F++ LPKTATGK+QK+ L ++
Sbjct: 468 AIIVLHKGAN-----VTEQEILDYTRENMSRFKVPKSVDFVETLPKTATGKLQKFQLREM 522
>gi|403509265|ref|YP_006640903.1| AMP-binding enzyme family protein [Nocardiopsis alba ATCC BAA-2165]
gi|402799341|gb|AFR06751.1| AMP-binding enzyme family protein [Nocardiopsis alba ATCC BAA-2165]
Length = 523
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 215/543 (39%), Positives = 302/543 (55%), Gaps = 30/543 (5%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTPL F R +++ D T+ Q + RC + +S L G+ G V+ IAPN
Sbjct: 5 LTPLEFARRTRRLYPQREAVVDRDLRLTYEQFFDRCDRWSSVLQDMGVVKGDRVAYIAPN 64
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
A E +AVP GA+ +N RL I++HS +K++ V + L V S+
Sbjct: 65 THAQLESFYAVPQLGAVLVPVNFRLTGEDFVYIVEHSGAKVLCV---HADQLDAVDSVRD 121
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SDLDPM 192
+ + + +E + YE ++A P F RP+ ++ D +
Sbjct: 122 RMPGVERFIALEGARE---------------GWEDYEALIAGASPGFE--RPEIAETDLL 164
Query: 193 VLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAA 252
+NYT GTT+ PKGV+ ++ ++ +V +L+ + LWTLPMFH NGW++TW
Sbjct: 165 TINYTSGTTARPKGVMITHRNAYMNSVGTLLHLRIELGQRYLWTLPMFHANGWTYTWTVT 224
Query: 253 VVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP--VRILTAG 310
G T+VCL D VF LIR+ V+ +C AP VL +L+++PE + D P V ++TAG
Sbjct: 225 AAGGTHVCLPAMDPARVFELIREEEVSWLCAAPTVLIMLANTPEGVRGDVPSGVHVVTAG 284
Query: 311 SPPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRT 369
+ P A + R E G+ V+H YG TE C +P+ L RER +LKARQGV
Sbjct: 285 ASPAAETIERLEGDFGWTVTHVYGLTETTPFITVCERRPEHEGLSTRERGALKARQGVEL 344
Query: 370 IGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVG 429
I E+ +VD E G V DG+T G+I +RG +M GY DPEAT K M DG ++TGD
Sbjct: 345 ITSGELRVVDDE-GAEVPWDGRTVGQITVRGNVVMSGYYNDPEATEKAMGDGWFHTGDAA 403
Query: 430 MMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAF 489
+ HPDGY+EI+DR KDVIISGGENISS E+E VL HP V E A+VG P W E P A
Sbjct: 404 VTHPDGYVEIQDRIKDVIISGGENISSVEVEGVLLRHPAVLEVAIVGVPHERWGETPRAS 463
Query: 490 VSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIAN 549
V L+ G + TEK+II + R + + P V F++ LPKTATGK+QKYVL A+
Sbjct: 464 VVLREGETA-----TEKEIIAFARDNLAHFKAPTQVEFVESLPKTATGKIQKYVLRGGAS 518
Query: 550 SMS 552
+++
Sbjct: 519 AVT 521
>gi|385679109|ref|ZP_10053037.1| o-succinylbenzoate--CoA ligase [Amycolatopsis sp. ATCC 39116]
Length = 529
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 214/534 (40%), Positives = 305/534 (57%), Gaps = 26/534 (4%)
Query: 12 CPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PLTPL F+ER+A D +I+Y + T+ + ++A +L + G+ PG V+ +
Sbjct: 7 TPLTPLAFLERSAEVFPDKDAIVYGERRVTYREFAAEATRVAHALRASGVGPGDRVAYLL 66
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PNIP M HFAVP++GA+ INTRL I IL+HS +K++ VD ++L
Sbjct: 67 PNIPEMLVAHFAVPLAGAVLVAINTRLAPAEIRYILEHSGAKVLVVD---AAL------- 116
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG-DPQFSWVRPKSDLD 190
H+ P + + + P P + TY+ +LA+G D W +
Sbjct: 117 ---HASVPPGTGVDV-VTVVDGAEPDPAVGGI----TYDELLARGSDEPLPW-SVADERS 167
Query: 191 PMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
+ +NYT GTT PKGV ++ ++ ++ +I +S LWTLPMFH NGW TW
Sbjct: 168 TISINYTSGTTGRPKGVQYHHRGAYLNSLAEIIHSGHTPESKYLWTLPMFHCNGWCTTWA 227
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAG 310
+G T+VCLR DA ++ L+ G+TH+ GAP VLN +++ A L R V + TAG
Sbjct: 228 VTAIGGTHVCLRAVDAAEIWRLLDGEGITHLNGAPTVLNTIAAYSGAHPLPREVVVTTAG 287
Query: 311 SPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTI 370
+PP V+ R LG + H YG TE G C + W KL ER+ L ARQGV +
Sbjct: 288 APPSPTVIRRMTDLGARLVHVYGLTETYGPYTVCEAQEGWVKLDIAERSRLMARQGVGML 347
Query: 371 GLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGM 430
+ +VD E V RDG T GE+VMRG ++M GY DPEAT K + G +++GD+G+
Sbjct: 348 VTDGIRVVD-EQMRDVPRDGVTMGEVVMRGNNVMSGYFADPEATEKAFRGGWFHSGDLGV 406
Query: 431 MHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFV 490
HPDGY++++DR+KD+I+SGGENIS+ E+E+ L SH V E AVVG PD W E P A+V
Sbjct: 407 WHPDGYIQLRDRAKDIIVSGGENISTIEVEAALDSHEAVAEVAVVGVPDEKWGERPKAYV 466
Query: 491 SLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
L+ G + T D+ + R +I R+ VP V F+D LPKT+TGK+QK+ L
Sbjct: 467 VLRPGATA-----TADDLRAHVREQIARFKVPDQVEFVDALPKTSTGKIQKFQL 515
>gi|441206043|ref|ZP_20972834.1| acsA3 [Mycobacterium smegmatis MKD8]
gi|440628591|gb|ELQ90387.1| acsA3 [Mycobacterium smegmatis MKD8]
Length = 515
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 210/535 (39%), Positives = 297/535 (55%), Gaps = 42/535 (7%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTP ++R+A A D +++ + T++Q RC ++ S+L++ G+ PG V+ + N
Sbjct: 9 LTPTSLLQRSAQAFPDRLAVVDGELRLTYTQFAERCSRVTSALAAAGVQPGDRVAALCTN 68
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
M ELH AVP GA+ +NTRL + I+ H+ ++++ + E
Sbjct: 69 SHVMLELHQAVPARGAVLVPLNTRLAFEEMQYIIGHAGARILIATREFADRARE------ 122
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIPPADFV---DTYENMLAK-GDPQFSWVRPKSDL 189
+ DD I D V D YE L P+ + DL
Sbjct: 123 ----------LADDAGI-------------DVVIEGDGYEEWLPDVASPEDRVAVGERDL 159
Query: 190 DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249
+ +NYT GTT PKGV+ ++ ++ AV + + LWTLPMFH NGW FTW
Sbjct: 160 --LAINYTSGTTGRPKGVMYHHRGAYLQAVAMAYHTRLDPSTGYLWTLPMFHCNGWCFTW 217
Query: 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTA 309
G T++CLRK D+ ++ L+R G+TH AP VL +++ P A+ L V + T
Sbjct: 218 AVGAAGGTHICLRKIDSAEIWRLLRGGGITHFSAAPTVLTMIAEDPSAQPLPARVHVDTG 277
Query: 310 GSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRT 369
G+PP +L R LGF V+H YG TE G W+P+W++LP E+A L+ARQGV
Sbjct: 278 GAPPSPALLARLTPLGFDVTHLYGLTETYGPVAVNVWQPEWDELPDDEQARLRARQGVGN 337
Query: 370 IGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVG 429
I + +VD G V RDG T GEI RG +MLGY D ATS +DG + TGD+
Sbjct: 338 IIANPLRVVDL-GGDDVPRDGTTIGEIAARGNDVMLGYYNDDAATSAATRDGYFLTGDLA 396
Query: 430 MMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAF 489
+MHPDGY+EI+DR+KDVIISGGENI+S EIE V+ SHP V E+AVVG D W E+P AF
Sbjct: 397 VMHPDGYVEIRDRAKDVIISGGENIASIEIEKVIDSHPEVVESAVVGVADEKWGEVPVAF 456
Query: 490 VSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
++ + G+D T ++ + R + + VP+T+VF D LPKT+TGK+QK VL
Sbjct: 457 ITRRDGSD-----VTFDELSTFLRGHLAGFKVPRTMVF-DHLPKTSTGKIQKNVL 505
>gi|404422178|ref|ZP_11003875.1| acyl-CoA synthetase [Mycobacterium fortuitum subsp. fortuitum DSM
46621]
gi|403657833|gb|EJZ12588.1| acyl-CoA synthetase [Mycobacterium fortuitum subsp. fortuitum DSM
46621]
Length = 528
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 212/544 (38%), Positives = 304/544 (55%), Gaps = 34/544 (6%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M RL A S LTP+ F++RAA D +++ ++T+ + ++RC QLA +L G
Sbjct: 1 MKRLTTTHAMSS-LTPVSFLDRAAAVHGDKVAVVDGSRSFTYREVHQRCRQLAGALVDNG 59
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ PG V+V++ N M E H+ VP + + IN+RL A I+ IL+HSE+ +V
Sbjct: 60 LQPGARVAVLSHNTREMLEGHYGVPYAAGVLVPINSRLSAGEIAYILQHSEADVVIATDA 119
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
+ L E +SL ++ + + +++ E + +++ P P D
Sbjct: 120 LTPLAAEAISLA---GRSVRTLAGSEEYEATIAAAEPVGNPLTD---------------- 160
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+L P+ +NYT GTT PKGVV ++ ++ ++ + S LWTLPMF
Sbjct: 161 -------ELSPLAINYTSGTTGKPKGVVYSHRGAYLQSLAMAFHSGMDLNSSYLWTLPMF 213
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGW FTW VGAT+VCL K DA ++ + +H +THMC AP VL+ +++ +
Sbjct: 214 HCNGWCFTWAVTAVGATHVCLPKVDADAIWHAVDQHEITHMCAAPTVLSSMTADARERSG 273
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
DR V + T G+PP +L R + G V+H YG TE G V WK +W LP +R
Sbjct: 274 DRSVWVATGGAPPAPALLARARACGLDVTHLYGMTETYGPAVINEWKREWTSLPNSDRDR 333
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
L ARQG+ I V ++D E G V D T GEI +RG ++ Y +DP AT+ + D
Sbjct: 334 LNARQGIGNIVSDVVRVLD-EQGRDVPADAATVGEIALRGNNVTPEYYRDPAATAAAVPD 392
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G + +GD+ + HPDGYLEI+DR+KDVIISGGENISS EIE + HP V EAAVV P
Sbjct: 393 GWFRSGDLAVRHPDGYLEIRDRAKDVIISGGENISSVEIERAILEHPAVLEAAVVAMPHA 452
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E P AFVSL++G D T DI + RI ++ +P + F ELPKTATGK++
Sbjct: 453 HWGERPVAFVSLRSGVD-----VTGNDIRDHLCDRIAKFKIPDRIEFT-ELPKTATGKIR 506
Query: 541 KYVL 544
K+ L
Sbjct: 507 KFEL 510
>gi|295696172|ref|YP_003589410.1| AMP-dependent synthetase and ligase [Kyrpidia tusciae DSM 2912]
gi|295411774|gb|ADG06266.1| AMP-dependent synthetase and ligase [Kyrpidia tusciae DSM 2912]
Length = 547
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 209/523 (39%), Positives = 302/523 (57%), Gaps = 29/523 (5%)
Query: 29 DCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSG 88
D ++I +D YT+ + +R +L+ +L GI G V+VI PNI M E F + G
Sbjct: 34 DKIAVIDDDYRYTYRELGQRINRLSHALRGDGIGKGDHVAVILPNIHEMIECFFGIGQLG 93
Query: 89 AIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDK 148
A+ +N RL+ + IL HS++KL+ +D ++++ ++ P + VL++
Sbjct: 94 AVVVPLNYRLNPDDFAYILNHSDAKLLILDAEYAAVIEQIRDRLP---GIRQFVLVSR-- 148
Query: 149 EISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP---MVLNYTWGTTSAPK 205
++SS P I YE L+ P P D+D + +NYT GTTS PK
Sbjct: 149 --GAASSTLPHI-------EYEQWLSSASPDDP---PAVDIDENQTLTINYTSGTTSRPK 196
Query: 206 GVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFD 265
GV+ ++ ++ A + L V + L TLP+FH NGW W GAT+VCLRK D
Sbjct: 197 GVMLTHRNNYLNAANFLYHLQVIHDDMYLHTLPLFHVNGWGGVWATTGAGATHVCLRKVD 256
Query: 266 APTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR--PVRILTAGSPPPAPVLLRT-E 322
+ +L +T +CGAP VLN++ ++ EA ++DR P R+ AGSPPPA VL R E
Sbjct: 257 PARIISLFNTEKITLLCGAPTVLNMMVNAKEASEVDRSIPRRMAVAGSPPPAAVLKRAHE 316
Query: 323 SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPET 382
L V H YG TE + C W ++ L ++A+++ARQG+ + EV +V E
Sbjct: 317 LLALNVIHVYGMTETSPFITYCEWNHHFDSLDDEQKATVRARQGIEQMFSGEVRVVSQED 376
Query: 383 -GLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKD 441
V+ DGQ GEIV RG ++M GY K PE T+K + DG +TGD+ ++HPDGY+EI D
Sbjct: 377 PTWDVRWDGQEIGEIVTRGNAVMAGYYKQPEETAKTIIDGWLHTGDLAVVHPDGYIEILD 436
Query: 442 RSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGM 501
R KD+IISGGENISSTE+E V+Y HP + EAAV+ PD W E+P A V +K G
Sbjct: 437 RQKDIIISGGENISSTEVEGVIYQHPAILEAAVIAVPDEKWGEVPKALVVVKP-----GF 491
Query: 502 MTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
TE ++I+YCR R+ + PK+V F++ LP+TATGK+QK+ L
Sbjct: 492 SLTELELIKYCRERLAHFKAPKSVEFVESLPRTATGKLQKFKL 534
>gi|262374882|ref|ZP_06068116.1| O-succinylbenzoate-CoA ligase [Acinetobacter lwoffii SH145]
gi|262309895|gb|EEY91024.1| O-succinylbenzoate-CoA ligase [Acinetobacter lwoffii SH145]
Length = 437
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 199/447 (44%), Positives = 280/447 (62%), Gaps = 19/447 (4%)
Query: 106 ILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADF 165
+L+H+ESK++ VD ++L E ++L V+ D E +I
Sbjct: 1 MLEHAESKVLLVDPEFTALATEALALV----SQDIYVIDVADAEFEGEDQRIGQIE---- 52
Query: 166 VDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDW 225
YE+ +A+GD F W P+ + D + L+YT GTT PKGVV ++ +I A ++I
Sbjct: 53 ---YEDWIAQGDANFEWHLPQDEWDAISLSYTSGTTGNPKGVVYHHRGAYINAASNIIAC 109
Query: 226 VVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAP 285
+ ++ LWTLP+FH NGW F W A G TNVCLRK DA +F LI +H V + CGAP
Sbjct: 110 GMTPRATYLWTLPLFHCNGWCFAWTMAANGGTNVCLRKVDAELIFKLIAEHKVDYFCGAP 169
Query: 286 IVLNLLSSSPEAKQ--LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVS 343
IVL++L ++PE K+ +D V ++ AG+ PPA ++ ++G V+H YG TE G +
Sbjct: 170 IVLSMLINTPEEKKTKIDHRVEVMVAGAAPPAAIIEGMRNIGINVTHVYGLTETYGPSAL 229
Query: 344 CAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSL 403
CA + W+ L +E+A L +RQGV + ++DP+T V DGQT GEI+ RG +
Sbjct: 230 CASQAGWSDLSIQEQAQLHSRQGVPYPLQDGMKVLDPDTMQEVPHDGQTMGEIMFRGNIV 289
Query: 404 MLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVL 463
M GYLK+PEAT++ G ++TGD+ + PDGY +I DRSKDVIISGGENISS E+E VL
Sbjct: 290 MKGYLKNPEATAEAFAGGWFHTGDLAVCQPDGYAKITDRSKDVIISGGENISSLEVEEVL 349
Query: 464 YSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPK 523
Y HP V AAVV +PDP WQE+PCAF+ LK GT + TE++I+++CR + R+ VPK
Sbjct: 350 YQHPAVLTAAVVAKPDPRWQEVPCAFIELKEGTKA-----TEEEIMEFCREHLARFKVPK 404
Query: 524 TVVFIDELPKTATGKVQKYVLGDIANS 550
VV I E+PKT+TGK+QK+VL + A
Sbjct: 405 DVV-ITEIPKTSTGKLQKFVLREWAKE 430
>gi|399986355|ref|YP_006566704.1| acyl CoA synthetase, AMP-binding protein [Mycobacterium smegmatis
str. MC2 155]
gi|399230916|gb|AFP38409.1| Acyl CoA synthetase, AMP-binding protein [Mycobacterium smegmatis
str. MC2 155]
Length = 534
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 210/535 (39%), Positives = 294/535 (54%), Gaps = 42/535 (7%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTP ++R+A A D +I+ + T++Q RC ++ S+L++ G+ PG V+ + N
Sbjct: 28 LTPTSLLQRSAQAFPDRLAIVDGELRLTYTQFAERCGRVTSALAAAGVQPGDRVAALCTN 87
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
M ELH AVP GA+ +NTRL + I+ H+ ++++ + E
Sbjct: 88 SHVMLELHQAVPARGAVLVPLNTRLAFEEMQYIIGHAGARILIATREFADRARE------ 141
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIPPADFV---DTYENMLAK-GDPQFSWVRPKSDL 189
+ DD I D V D YE L P+ + DL
Sbjct: 142 ----------LADDAGI-------------DVVIEGDGYEEWLPDVASPEDRVAVGERDL 178
Query: 190 DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249
+ +NYT GTT PKGV+ ++ ++ AV + + LWTLPMFH NGW FTW
Sbjct: 179 --LAINYTSGTTGRPKGVMYHHRGAYLQAVAMAYHTRLDPSTGYLWTLPMFHCNGWCFTW 236
Query: 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTA 309
G T++CLRK D+ ++ +R G+TH AP VL +++ P A+ L V + T
Sbjct: 237 AVGAAGGTHICLRKIDSAEIWRWLRGGGITHFSAAPTVLTMIAEDPSAQPLPARVHVDTG 296
Query: 310 GSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRT 369
G+PP +L R LGF V+H YG TE G W+P+W++LP E+A L+ARQGV
Sbjct: 297 GAPPSPALLARLTPLGFDVTHLYGLTETYGPVAVNVWQPEWDELPDDEQARLRARQGVGN 356
Query: 370 IGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVG 429
I + +VD G V RDG T GEI RG +MLGY D ATS +DG + TGD+
Sbjct: 357 IIANPLRVVDL-GGDDVPRDGTTIGEIAARGNDVMLGYYNDDAATSAATRDGYFLTGDLA 415
Query: 430 MMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAF 489
MHPDGY+EI+DR+KDVIISGGENI+S EIE V+ SHP V E+AVVG D W E+P AF
Sbjct: 416 AMHPDGYVEIRDRAKDVIISGGENIASIEIEKVIDSHPEVVESAVVGVADEKWGEVPVAF 475
Query: 490 VSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
++ + G+D T + + R + + VP+T+VF D LPKT+TGK+QK VL
Sbjct: 476 ITRRDGSD-----VTFDQLTTFLREHLAGFKVPRTMVF-DHLPKTSTGKIQKNVL 524
>gi|118470199|ref|YP_886346.1| acyl-CoA synthetase [Mycobacterium smegmatis str. MC2 155]
gi|118171486|gb|ABK72382.1| acyl-CoA synthase [Mycobacterium smegmatis str. MC2 155]
Length = 515
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 210/535 (39%), Positives = 294/535 (54%), Gaps = 42/535 (7%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTP ++R+A A D +I+ + T++Q RC ++ S+L++ G+ PG V+ + N
Sbjct: 9 LTPTSLLQRSAQAFPDRLAIVDGELRLTYTQFAERCGRVTSALAAAGVQPGDRVAALCTN 68
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
M ELH AVP GA+ +NTRL + I+ H+ ++++ + E
Sbjct: 69 SHVMLELHQAVPARGAVLVPLNTRLAFEEMQYIIGHAGARILIATREFADRARE------ 122
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIPPADFV---DTYENMLAK-GDPQFSWVRPKSDL 189
+ DD I D V D YE L P+ + DL
Sbjct: 123 ----------LADDAGI-------------DVVIEGDGYEEWLPDVASPEDRVAVGERDL 159
Query: 190 DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249
+ +NYT GTT PKGV+ ++ ++ AV + + LWTLPMFH NGW FTW
Sbjct: 160 --LAINYTSGTTGRPKGVMYHHRGAYLQAVAMAYHTRLDPSTGYLWTLPMFHCNGWCFTW 217
Query: 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTA 309
G T++CLRK D+ ++ +R G+TH AP VL +++ P A+ L V + T
Sbjct: 218 AVGAAGGTHICLRKIDSAEIWRWLRGGGITHFSAAPTVLTMIAEDPSAQPLPARVHVDTG 277
Query: 310 GSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRT 369
G+PP +L R LGF V+H YG TE G W+P+W++LP E+A L+ARQGV
Sbjct: 278 GAPPSPALLARLTPLGFDVTHLYGLTETYGPVAVNVWQPEWDELPDDEQARLRARQGVGN 337
Query: 370 IGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVG 429
I + +VD G V RDG T GEI RG +MLGY D ATS +DG + TGD+
Sbjct: 338 IIANPLRVVDL-GGDDVPRDGTTIGEIAARGNDVMLGYYNDDAATSAATRDGYFLTGDLA 396
Query: 430 MMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAF 489
MHPDGY+EI+DR+KDVIISGGENI+S EIE V+ SHP V E+AVVG D W E+P AF
Sbjct: 397 AMHPDGYVEIRDRAKDVIISGGENIASIEIEKVIDSHPEVVESAVVGVADEKWGEVPVAF 456
Query: 490 VSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
++ + G+D T + + R + + VP+T+VF D LPKT+TGK+QK VL
Sbjct: 457 ITRRDGSD-----VTFDQLTTFLREHLAGFKVPRTMVF-DHLPKTSTGKIQKNVL 505
>gi|23100121|ref|NP_693587.1| AMP-binding protein [Oceanobacillus iheyensis HTE831]
gi|22778353|dbj|BAC14622.1| AMP-binding enzyme [Oceanobacillus iheyensis HTE831]
Length = 530
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 203/542 (37%), Positives = 308/542 (56%), Gaps = 29/542 (5%)
Query: 12 CPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PLTPL + RA + +I+ D ++T+ + R QL+ L GI G V+V+
Sbjct: 3 APLTPLDWKRRAIKYYPEKIAIVDGDKSFTYKEFGHRVDQLSKGLLEKGIKEGDHVAVML 62
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN M E + + GA+ +N RL A+ ++ I+ HS++KL+ VD + + E+ +
Sbjct: 63 PNTHYMLECFYGICQIGAVMVPLNYRLSAKDLNYIINHSDAKLLIVDEAFTEPIEEIQNS 122
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
+++++ D E +S YE ++ + + P ++D
Sbjct: 123 L----SLEEMIIVEVDGESTSLQGT-----------LYEALIHHDNDKVEL--PIVEIDE 165
Query: 192 ---MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
M +NYT GTTS PKGV+ +++ +I A + L V L TLPMFH NGW
Sbjct: 166 NQLMTINYTSGTTSNPKGVMLTHRSNYINAANFLYHINVSHDDRYLHTLPMFHANGWGGV 225
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD--RPVRI 306
W G T+VCLRK D P + + + +T +CGAP V+N+L + P+AKQL+ +R+
Sbjct: 226 WAITAAGGTHVCLRKVDPPLILDIFEEQQITMLCGAPTVVNMLVNEPKAKQLNLQSKLRM 285
Query: 307 LTAGSPPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
TAGSPP A ++ + + LG + H YG TE + + C WK +N+ + E+A++KARQ
Sbjct: 286 ATAGSPPAAALIQKAQDILGLEMVHVYGLTETSPFILYCEWKQDFNEKSSDEQATIKARQ 345
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYT 425
G+ E ++ P+ G V +G+ GEIV RG +M GY KD E T MKDG ++T
Sbjct: 346 GIELAFNGETTVIRPD-GEEVLWNGEELGEIVTRGNVVMQGYYKDVEKTDAAMKDGWFHT 404
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+ ++H DG++EI+DR+KD+IISGGENISSTE+E VLY HP V E AV+ PD W E+
Sbjct: 405 GDLAVIHSDGFIEIRDRAKDLIISGGENISSTEVEGVLYKHPDVLEVAVIAIPDEKWGEV 464
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLG 545
P A + + + TE+++I YCR + + PK V F++ELPKTATGK+QK+ L
Sbjct: 465 PLAIIVPQPHS-----ALTEEEVITYCRENLAHFKSPKKVEFVEELPKTATGKLQKFRLR 519
Query: 546 DI 547
++
Sbjct: 520 EL 521
>gi|453382763|dbj|GAC82842.1| putative fatty-acid--CoA ligase [Gordonia paraffinivorans NBRC
108238]
Length = 559
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 205/546 (37%), Positives = 306/546 (56%), Gaps = 14/546 (2%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN L+PL F+ER+A D +I+Y ++++++ +LA L S I PG V+
Sbjct: 23 ANRSELSPLRFLERSAAVFPDREAIVYGRRSHSYAEFADHVQRLARVLRS-KIAPGDRVA 81
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+APNIP M HFAVP++G + +N+RL + IL+HS ++ ++ D + ++
Sbjct: 82 YLAPNIPEMLIAHFAVPLAGGVLVALNSRLAGPELVYILEHSGARALYFDAEFRGTVADI 141
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
++ P + +V ITD E + P V +++ A GD S + D
Sbjct: 142 IADVP---QVETVVEITD-PEFGVTGGPVGESGVPGLVSYEDHLAAAGDLDPSPIPWTVD 197
Query: 189 LDPMVL--NYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
+ ++ NYT GTT PKGV+ ++ ++ + Q+ LWTLPMFH NGW
Sbjct: 198 DENTIIAINYTSGTTGKPKGVMYTHRGAYLNSFGETFHNQFTGQTKYLWTLPMFHCNGWC 257
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRI 306
W G T++CLR A ++ I GVTHMCGAP V + SP A +LDRP+RI
Sbjct: 258 TPWAVTHAGGTHICLRAVRAEAIWDAIDNLGVTHMCGAPTVCTTIVGSPRAHRLDRPLRI 317
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
TAG+PP V+ E++G V H YG TE+ G C ++ W+ L ERA+ +RQG
Sbjct: 318 TTAGAPPSPTVIGSLEAIGVTVVHVYGLTEVYGPYTICEYQDSWSDLAPDERAAKLSRQG 377
Query: 367 VRTIGLTEVDIVDPET--GLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYY 424
V + +V P++ + V DG+T GEIV+RG ++M GY +D E T K G ++
Sbjct: 378 VGMVQAENARVVVPDSLPLVDVPADGETMGEIVLRGNNVMAGYFRDEEETRKAFAGGWFH 437
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
TGD+G+MHPDGY++++DR+KD+IISGGENIS+ E+E L SH V + AV+G D W E
Sbjct: 438 TGDLGVMHPDGYIQLRDRAKDIIISGGENISTIEVEQALVSHDAVLDVAVIGVADEKWGE 497
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P A+V L G T +++I++ R + Y VP+ +VF +LP+T TGKV K L
Sbjct: 498 RPRAYVLLNPGA-----TLTAEELIEHGRRLLAGYKVPRDIVFAGDLPRTPTGKVLKGEL 552
Query: 545 GDIANS 550
+ A +
Sbjct: 553 RERARA 558
>gi|359769363|ref|ZP_09273125.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans NBRC
16320]
gi|359313269|dbj|GAB25958.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans NBRC
16320]
Length = 566
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 208/550 (37%), Positives = 305/550 (55%), Gaps = 20/550 (3%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
R+ AN L+PL F+ER+AT D +IIY D ++++ +LA L S I
Sbjct: 22 RIDCGSANRSELSPLRFLERSATVFGDRTAIIYGDRRASYAEFADEVQRLARVLKSR-IA 80
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G ++ +APNIP M H+AVP++G + +N+RL + IL H+ +F D
Sbjct: 81 RGERIAYLAPNIPEMLVAHYAVPLAGGVLVALNSRLAGPELVYILNHAGVTTLFFDAEFR 140
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDK------EISSSSSPPPRIPPADFVDTYENMLAKG 176
+ + P + T V ITD + ++ +S + ADF+ + +
Sbjct: 141 HTVSLIADEVPEVATT---VEITDPEFGPTMGDVGASGITGLQTY-ADFLALADGPDVEQ 196
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
DP W D + +NYT GTT PKGV+ ++ ++ + S LWT
Sbjct: 197 DP-IPWTVDDEDT-VITINYTSGTTGKPKGVMYTHRGAYLNSFGETFHNQFTGHSRYLWT 254
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
LPMFH NGW W AT+VCLR A V+ I G+TH+CGAP V ++ SP
Sbjct: 255 LPMFHCNGWCTPWAVTQASATHVCLRAVRADAVWDAIDDLGITHLCGAPTVCTTIAGSPR 314
Query: 297 AKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
A +LDRP+ I TAG+PP V+ + E+LG V H YG TE+ G C ++ W +LPA
Sbjct: 315 AHRLDRPLHITTAGAPPSPTVIGQLEALGITVVHVYGLTEVYGPYTICEFQDAWAELPAD 374
Query: 357 ERASLKARQGVRTIGLTEVDIVDPET--GLSVKRDGQTRGEIVMRGGSLMLGYLKDPEAT 414
RA+ +RQGV + +V + + V DG+T GEIV+RG ++M GY +DP AT
Sbjct: 375 GRAAKLSRQGVGMVQAEAARVVKRDVLPLVDVPADGETMGEIVLRGNNVMAGYFRDPAAT 434
Query: 415 SKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474
+ G ++TGD+G+MHPDGY++++DR+KD+IISGGENIS+ E+E L SH V + AV
Sbjct: 435 REAFAGGWFHTGDLGVMHPDGYIQLRDRAKDIIISGGENISTIEVEQALVSHDSVLDVAV 494
Query: 475 VGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKT 534
+G PD W E P A+V L + G + +++I++ R + Y VP+ +VF DELP+T
Sbjct: 495 IGVPDEKWGERPRAYVLL-----TPGAQLSAEELIEHARTLLAGYKVPRDIVFADELPRT 549
Query: 535 ATGKVQKYVL 544
+TGKV K+ L
Sbjct: 550 STGKVLKFEL 559
>gi|378716598|ref|YP_005281487.1| putative acyl-CoA ligase [Gordonia polyisoprenivorans VH2]
gi|375751301|gb|AFA72121.1| putative acyl-CoA ligase [Gordonia polyisoprenivorans VH2]
Length = 566
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 207/550 (37%), Positives = 305/550 (55%), Gaps = 20/550 (3%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
R+ AN L+PL F+ER+AT D +IIY D ++++ +LA L S +
Sbjct: 22 RIDCGSANRSELSPLRFLERSATVFGDRTAIIYGDRRASYAEFADEVQRLARVLKSR-VA 80
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G ++ +APNIP M H+AVP++G + +N+RL + IL H+ +F D
Sbjct: 81 RGERIAYLAPNIPEMLVAHYAVPLAGGVLVALNSRLAGPELVYILNHAGVTTLFFDAEFR 140
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDK------EISSSSSPPPRIPPADFVDTYENMLAKG 176
+ + P + T V ITD + ++ +S + ADF+ + +
Sbjct: 141 HTVSLIADEVPEVATT---VEITDPEFGPTMGDVGASGITGLQTY-ADFLALADGPDVEQ 196
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
DP W D + +NYT GTT PKGV+ ++ ++ + S LWT
Sbjct: 197 DP-IPWTVDDEDT-VITINYTSGTTGKPKGVMYTHRGAYLNSFGETFHNQFTGHSRYLWT 254
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
LPMFH NGW W AT+VCLR A V+ I G+TH+CGAP V ++ SP
Sbjct: 255 LPMFHCNGWCTPWAVTQASATHVCLRAVRADAVWDAIDDLGITHLCGAPTVCTTIAGSPR 314
Query: 297 AKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
A +LDRP+ I TAG+PP V+ + E+LG V H YG TE+ G C ++ W +LPA
Sbjct: 315 AHRLDRPLHITTAGAPPSPTVIGQLEALGITVVHVYGLTEVYGPYTICEFQDAWAELPAD 374
Query: 357 ERASLKARQGVRTIGLTEVDIVDPET--GLSVKRDGQTRGEIVMRGGSLMLGYLKDPEAT 414
RA+ +RQGV + +V + + V DG+T GEIV+RG ++M GY +DP AT
Sbjct: 375 ARAAKLSRQGVGMVQAEAARVVKRDVLPLVDVPADGETMGEIVLRGNNVMAGYFRDPAAT 434
Query: 415 SKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474
+ G ++TGD+G+MHPDGY++++DR+KD+IISGGENIS+ E+E L SH V + AV
Sbjct: 435 REAFAGGWFHTGDLGVMHPDGYIQLRDRAKDIIISGGENISTIEVEQALVSHDSVLDVAV 494
Query: 475 VGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKT 534
+G PD W E P A+V L + G + +++I++ R + Y VP+ +VF DELP+T
Sbjct: 495 IGVPDEKWGERPRAYVLL-----TPGAQLSAEELIEHARTLLAGYKVPRDIVFADELPRT 549
Query: 535 ATGKVQKYVL 544
+TGKV K+ L
Sbjct: 550 STGKVLKFEL 559
>gi|54023241|ref|YP_117483.1| acyl-CoA synthetase [Nocardia farcinica IFM 10152]
gi|54014749|dbj|BAD56119.1| putative acyl-CoA synthetase [Nocardia farcinica IFM 10152]
Length = 515
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 207/531 (38%), Positives = 290/531 (54%), Gaps = 33/531 (6%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTP+ F++RAA+ + +++ T T+ + + RC LA +L G+ PG V+V++ N
Sbjct: 8 LTPVRFLDRAASVHGERTAVVDGPRTLTYRELHDRCRSLAGALVDRGVQPGDRVAVLSHN 67
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
M E H+ VP +G + +N RL A I+ IL HS ++++ +SL LE V+L P
Sbjct: 68 TLEMLEAHYGVPYAGGVLVPLNARLSATEIAFILDHSGARVLIATDPLTSLALEAVALTP 127
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMV 193
+ +I +E YE ++A G P + +L P+
Sbjct: 128 G-----PMTVIAGAEE-------------------YEAIVASGAPVD--ISSHDELAPIA 161
Query: 194 LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAV 253
+NYT GTT PKGVV ++ ++ +V + SV LWTLPMFH NGW FTW
Sbjct: 162 INYTSGTTGKPKGVVYTHRGAYLQSVAMAFHSGMDLNSVYLWTLPMFHCNGWCFTWAVTA 221
Query: 254 VGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPP 313
GAT+VCL K +A ++A I GVTH+C AP V++ ++S R V + T G+PP
Sbjct: 222 AGATHVCLPKVEADAIWAAIGDAGVTHLCAAPTVISTITSDAPTTTSPRRVWVATGGAPP 281
Query: 314 PAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLT 373
+L R G V+H YG TE G V W W+ P ER L ARQGV I
Sbjct: 282 APALLARARRCGLDVTHLYGMTETYGPAVINEWDRAWDAAPEAERDRLNARQGVGNIITG 341
Query: 374 EVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHP 433
V +VD E G V D T GEIV+RG ++ Y +DP AT+ + DG + TGD+ + H
Sbjct: 342 GVRVVD-EAGGDVPADATTIGEIVLRGNNVTAEYYRDPAATAAAVSDGWFRTGDLAVRHS 400
Query: 434 DGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLK 493
DGY+EI+DR+KD+IISGGENISS EIE + HP V EAAVV P W E P AFVSL+
Sbjct: 401 DGYIEIRDRAKDLIISGGENISSIEIERAILEHPAVLEAAVVRVPHEHWGERPAAFVSLR 460
Query: 494 TGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
G + + ++ + R+ ++ VP + F LPKTATGK+QK+ L
Sbjct: 461 PGAE-----LSSGELRAHLLDRLAKFKVPDRIEFA-TLPKTATGKIQKFQL 505
>gi|453078818|ref|ZP_21981544.1| fatty-acid--CoA ligase [Rhodococcus triatomae BKS 15-14]
gi|452755971|gb|EME14389.1| fatty-acid--CoA ligase [Rhodococcus triatomae BKS 15-14]
Length = 541
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 202/538 (37%), Positives = 302/538 (56%), Gaps = 19/538 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN L+PL F+ER+A + +I++ D YT+ + +LA L S I PG V+
Sbjct: 11 ANHSELSPLRFLERSAAVFPERTAIVHGDRRYTYREFGDEVQRLAQVLRSR-IEPGDRVA 69
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+ PN P M HFAVP++G + +N+RL + IL+HS + ++FVD S L
Sbjct: 70 YLCPNTPEMLMAHFAVPLAGGVLIALNSRLAGPELEYILEHSGASVLFVD---SEFLGSA 126
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG--DPQFSWVRPK 186
++ ++V I D S+ + P + A TY ++LA W
Sbjct: 127 ATIRGAVPTVREIVEIPD----STITVAEPVVGVATI--TYPDLLATAVDAAPLPWTV-A 179
Query: 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
+ P+ +NYT GTT PKGV+ ++ ++ ++ + LWTLPMFH NGW
Sbjct: 180 DEQTPIAINYTSGTTGKPKGVMYSHRGAYLNSLGETFHNGFTGDTKYLWTLPMFHCNGWC 239
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRI 306
W G T+VCLR A ++ I G+T++CGAP V + ++ + EA L P+RI
Sbjct: 240 TPWAVTAAGGTHVCLRAVRAEPIWEAIDTLGITNLCGAPTVCSTIADAAEAHALTTPLRI 299
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
TAG+PP ++ + E+LG V H YG TE+ G C + W +L ERA L +RQG
Sbjct: 300 TTAGAPPSPTIIGKLEALGVTVVHVYGLTEVYGPYTICEPQESWAELDPAERAVLISRQG 359
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
V + +VDP+ V DG + GEIV+RG ++MLGY +D EAT++ G ++TG
Sbjct: 360 VGMLQAETARVVDPQMN-DVPADGVSLGEIVLRGNNVMLGYYRDEEATAQAFAGGWFHTG 418
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+G+MHPDGY+++KDR+KD+IISGGENIS+ E+E + SHP V + AV+G PD W E P
Sbjct: 419 DLGVMHPDGYIQLKDRAKDIIISGGENISTVEVEQAIVSHPAVADVAVIGVPDDRWGERP 478
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
AFV L+ G + + +++I + R + Y VP+ + F +LP+T TGK++K L
Sbjct: 479 KAFVLLRPGAE-----LSAEELITHTRRLLAGYKVPRDIAFASDLPRTPTGKIRKNEL 531
>gi|224074311|ref|XP_002335883.1| predicted protein [Populus trichocarpa]
gi|222836175|gb|EEE74596.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 173/249 (69%), Positives = 198/249 (79%), Gaps = 3/249 (1%)
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L PV+ILTAG+PPP+ VL R ESLGF+VSHGYG TE AG+ SCAWKPKWN PA ERA
Sbjct: 1 LQNPVQILTAGAPPPSAVLFRAESLGFVVSHGYGLTETAGLVTSCAWKPKWNTFPASERA 60
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LK+RQGV +G TE+ +VDP TG SV+RDG + GE+V+RGGS+MLGY KDP TS CMK
Sbjct: 61 ILKSRQGVPIVGFTEMGVVDPNTGKSVERDGVSLGEVVLRGGSVMLGYFKDPLGTSMCMK 120
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
DG +YTGDVG++H DGYLE+KDRSKDVIISGGENISS EIESVLY+HP VNEAAVV RPD
Sbjct: 121 DGWFYTGDVGVVHSDGYLEVKDRSKDVIISGGENISSVEIESVLYTHPAVNEAAVVARPD 180
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
FW E PCAFVSLK G EKDII YCR ++ YMVPK VVF DELPKT+TGK+
Sbjct: 181 EFWGETPCAFVSLKNGLPH---KPGEKDIIDYCREKMAHYMVPKIVVFKDELPKTSTGKI 237
Query: 540 QKYVLGDIA 548
QKY+L + A
Sbjct: 238 QKYLLREYA 246
>gi|384136516|ref|YP_005519230.1| AMP-dependent synthetase and ligase [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
gi|339290601|gb|AEJ44711.1| AMP-dependent synthetase and ligase [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
Length = 504
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 212/518 (40%), Positives = 291/518 (56%), Gaps = 32/518 (6%)
Query: 36 NDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTIN 95
+ +T+S+ R +L+ +L G+ G V+V+ PN M E F + GAI IN
Sbjct: 3 GEKRFTYSEFSSRVGRLSHALLELGVAQGSKVAVLCPNTHPMLEAFFGICQLGAIIVPIN 62
Query: 96 TRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSS 155
RL I+ IL HSES+++ VD S V + S ++ +I+S S
Sbjct: 63 IRLQPEEIAYILDHSESEVLIVD---SEWGHVVEPILRGRSGLRHVI------QIASHDS 113
Query: 156 PPPRIPPADFVDTYENML--AKGDPQFSWVRPKSDLD-PMVLNYTWGTTSAPKGVVQCYK 212
P D D YE +L A DP + D D P+ +NYT GTTS PKGVV ++
Sbjct: 114 P------LDACD-YEALLERASDDP----IETHIDEDQPISINYTSGTTSRPKGVVLTHR 162
Query: 213 AFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFAL 272
++ A D L V V L TLP+FH NGW W VG T++CLRK D + L
Sbjct: 163 NSYLNAADFLFHLRVAHDDVYLHTLPLFHVNGWGGVWAITAVGGTHICLRKVDPAVILRL 222
Query: 273 IRKHGVTHMCGAPIVLNLLSSSPEAK--QLDRPVRILTAGSPPPAPVLLRTES-LGFIVS 329
GVT C AP VLN++ P+ + +L+R R+ TAGSPPPA V+ + E L +
Sbjct: 223 YVNEGVTLACAAPTVLNMILQHPDVEHVRLNRRTRMATAGSPPPAAVIEKAEKFLQMEIL 282
Query: 330 HGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRD 389
H YG TE + C W +L RA KAR+GV + EV +V E G V +
Sbjct: 283 HVYGLTETSPFITYCEWTQAHERLQGDARARAKARKGVEMVFAGEVKVVR-EDGQEVAWN 341
Query: 390 GQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIIS 449
GQ GEIV RG +M GY K+P+ T+K ++DG ++TGD+ ++HPDG++EI DR KD+IIS
Sbjct: 342 GQEVGEIVARGNVVMDGYYKNPDETAKVIRDGWFHTGDLAVVHPDGHIEIVDRLKDIIIS 401
Query: 450 GGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDII 509
GGEN+SS E+E VLY HP V EA VV RPD W E+P AFV K G + TE+++
Sbjct: 402 GGENVSSVEVEGVLYEHPDVIEAGVVSRPDDQWGEVPVAFVVKKLGE-----VLTEEELR 456
Query: 510 QYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDI 547
+CRAR+ + VPK F+D+LP+TATGK+QK+ L ++
Sbjct: 457 AFCRARLAHFKVPKAFYFVDQLPRTATGKLQKFKLREM 494
>gi|397738012|ref|ZP_10504647.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
gi|396926079|gb|EJI93353.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
Length = 531
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 211/545 (38%), Positives = 298/545 (54%), Gaps = 24/545 (4%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTPL F++RAA D +I+ T+S+ LA L+ G+ V+ +APN
Sbjct: 9 LTPLAFLDRAAKTFPDKTAIVLGGRRATYSEFAAEAAALARGLARLGVGEQDRVAYLAPN 68
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
+P + HF VP+S + +NTRL + I+ IL H ++K++ V H S LL+ +
Sbjct: 69 VPELLVAHFGVPLSKGVLVALNTRLASAEIAYILAHCDAKILVV-HES---LLDSIRPIA 124
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMV 193
+ +V+I I D ++ + + W + +L +
Sbjct: 125 GELRLSTVVVIGAGD-----------IAGVDALEYRKILDHNAHEPIDWT-VRDELATIS 172
Query: 194 LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAV 253
+NYT GTT PKGV+ ++ ++ A+ LI SV LWTLPMFH NGW W
Sbjct: 173 INYTSGTTGRPKGVMYTHRGAYLNAMGELIHSRHTSDSVYLWTLPMFHCNGWCTPWAITA 232
Query: 254 VGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPP 313
+G T++CL D+ ++AL R GV+H AP VL +L +SP A L + V + TAG+PP
Sbjct: 233 IGGTHICLEAIDSEKIWALFRTEGVSHFNAAPTVLVMLVNSPSAAALPQAVTVTTAGAPP 292
Query: 314 PAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLT 373
++ + +LGF + H YG TE G C + W +LPA E+A L ARQGV I
Sbjct: 293 SPTIIEQARALGFEIIHVYGLTETYGPYSVCETQSDWAELPATEQARLAARQGVGMIHTD 352
Query: 374 EVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHP 433
V +VD V DG T GEIVMRG +M GYL DP AT K + G +++GD+G+MHP
Sbjct: 353 GVRVVDKNM-TDVPADGSTIGEIVMRGNGVMKGYLNDPAATEKAFEGGWFHSGDLGVMHP 411
Query: 434 DGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLK 493
DGY+E++DRSKD++ISGGENISS E+E VL SHP V EAAV+G P W E P AFV K
Sbjct: 412 DGYVELRDRSKDIVISGGENISSVEVEQVLVSHPAVLEAAVIGVPSEKWGERPKAFVVTK 471
Query: 494 TGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMSM 553
T ++ + R+ ++ VP + ID LPKT+TGK+QK+ L D S
Sbjct: 472 PNA-----QVTPDELRSHAATRMAKFKVPDVIDVIDALPKTSTGKIQKFQLRD--REWSG 524
Query: 554 SHSRM 558
H+R+
Sbjct: 525 HHTRI 529
>gi|146303179|ref|YP_001190495.1| AMP-dependent synthetase and ligase [Metallosphaera sedula DSM
5348]
gi|145701429|gb|ABP94571.1| AMP-dependent synthetase and ligase [Metallosphaera sedula DSM
5348]
Length = 549
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 203/539 (37%), Positives = 296/539 (54%), Gaps = 20/539 (3%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTPL F+ERA D +++Y D+ YT+S Y + AS+L G + +S I+ N
Sbjct: 22 LTPLLFLERAGKYFKDKTAVVYRDSRYTYSTFYDNVMVQASALMRRGFSREDKLSFISRN 81
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
P E F VP +G + IN RL + ++ I+ HS+SK V VD + LLEV
Sbjct: 82 RPEFLESFFGVPYAGGVLVPINFRLSPKEMAYIINHSDSKFVVVDEPYLNSLLEVKDQI- 140
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMV 193
+++L+ D S+S + + TY ++ G + K + +
Sbjct: 141 ----KAEIILLEDPDNPSASETARKEVRM-----TYRELVKGGSRDPLPIPAKEEYSMIT 191
Query: 194 LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAV 253
L YT GTT PKGV+ ++ F+ A+ +++ + SV LWTLPMFH W F+W
Sbjct: 192 LYYTSGTTGLPKGVMHHHRGAFLNAMAEVLEHQMDLNSVYLWTLPMFHAASWGFSWATVA 251
Query: 254 VGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD--RPVRILTAGS 311
VGATNVCL K D P ++ L+ K VTHMC AP V L+ + L V +L AG+
Sbjct: 252 VGATNVCLDKVDYPLIYRLVEKERVTHMCAAPTVYVNLADYMKRNNLKFSNRVHMLVAGA 311
Query: 312 PPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIG 371
P L + +G + H YG TE G + C W+ +W+ LP E+A LKARQG+ +
Sbjct: 312 APAPATLKAMQEIGGYMCHVYGLTETYGPHSICEWRREWDSLPLEEQAKLKARQGIPYVS 371
Query: 372 LTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMM 431
E+D+ D G V DG+T GE+VMRG ++ LGY K+PE T++ +DG +++GD ++
Sbjct: 372 F-EMDVFDA-NGKPVPWDGKTIGEVVMRGHNVALGYYKNPEKTAESFRDGWFHSGDAAVV 429
Query: 432 HPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVS 491
HPDGY+EI DR KD+I +GGE +SS +E L P V AV G PD W E+ A +
Sbjct: 430 HPDGYIEIVDRFKDLINTGGEKVSSILVEKTLMEIPGVKAVAVYGTPDEKWGEVVTARIE 489
Query: 492 LKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANS 550
L+ G TE+++I++C+ R+ + PK V F +P TATGK+QKYVL + A +
Sbjct: 490 LQEGVK-----LTEEEVIKFCKERLAHFECPKIVEF-GPIPMTATGKMQKYVLRNEAKA 542
>gi|359770936|ref|ZP_09274403.1| putative fatty-acid--CoA ligase [Gordonia effusa NBRC 100432]
gi|359311892|dbj|GAB17181.1| putative fatty-acid--CoA ligase [Gordonia effusa NBRC 100432]
Length = 517
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 204/545 (37%), Positives = 300/545 (55%), Gaps = 32/545 (5%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ P ++ PLT F+ RAA D +++ DT T+ + R +L S+L +G
Sbjct: 1 MNNPAPQSFSTSPLTVTAFLPRAAAVFADRLAVVDGDTRLTYREFADRTGRLVSALHGWG 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I PG V+ + N M ELH A+P GA+ +NTRL A ++ IL HS + ++ V
Sbjct: 61 IAPGDRVAALCSNSHVMLELHHAIPAMGAVLVPVNTRLAAAEVAYILDHSGAHVLVVTGE 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
L L + P + +I D S YE+ L+ F
Sbjct: 121 YRELALAAT------AAKPDIRVIVADGPGSE----------------YESTLST--TGF 156
Query: 181 SWVRP-KSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPM 239
+ + P ++D + +NYT GTT PKGV+ ++ ++ A+ + S LWTLPM
Sbjct: 157 TEIGPIEADDALLAINYTSGTTGRPKGVMYNHRGAYLQAIAMAYHAGLTPDSGYLWTLPM 216
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH NGW F W G T++CLR D ++ + VTH+C AP VL +++ A+
Sbjct: 217 FHCNGWCFPWAVTASGGTHICLRAIDTTQIWHHLAAGSVTHLCCAPTVLTMVAEDDLARI 276
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L PV +LT G+PP +L R + LGF +H YG TE G V W+ +W++L ER+
Sbjct: 277 LKAPVTVLTGGAPPSPALLRRVDGLGFRTTHLYGMTETYGPIVVNWWQSRWDQLTPDERS 336
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
L+ARQG+ I + ++ P+ G V DG GE+V+RG ++M GY +DP AT+
Sbjct: 337 RLRARQGIGNIVSEQPRVLHPDGGSEVTPDGTDVGELVVRGNNVMAGYYRDPAATAAATV 396
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
TGD+ ++HPDGYLE++DR+KD+IISGGENI+S E+E + HP V E+AVV R D
Sbjct: 397 SSWLRTGDLAVVHPDGYLELRDRAKDIIISGGENIASVEVERAIDEHPDVIESAVVARSD 456
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E+P AFV+ + S E++II++CRAR+ R+ PK VF ELPKT+TGK+
Sbjct: 457 EKWGEVPVAFVTARRADLS------EREIIEHCRARLARFKAPK-AVFFTELPKTSTGKI 509
Query: 540 QKYVL 544
+K +L
Sbjct: 510 RKNLL 514
>gi|377568750|ref|ZP_09797927.1| putative fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
gi|377534127|dbj|GAB43092.1| putative fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
Length = 536
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 207/531 (38%), Positives = 294/531 (55%), Gaps = 30/531 (5%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
L+P F++RAA A ++I +T+++ + R +L + + G+ PG V+ + N
Sbjct: 29 LSPATFLDRAAAAFAGRIAVIDGSRRFTYTEFHDRVQRLTAVIEQLGVGPGDRVAALCAN 88
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
M ELH A P G++ +N RL ++ IL+HS +S+L+ V
Sbjct: 89 SHVMLELHSAAPAHGSVLVPLNVRLSEPELTYILEHS----------GASVLVSTVEFAG 138
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMV 193
+ V + + + S AD D YE +LA D R + +
Sbjct: 139 RARAVGEAVGL---RVVIGGS--------ADGSDEYERLLA--DAGAPVRRDTDERGLLA 185
Query: 194 LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAV 253
+NYT GTT PKGV+ ++ ++ +V + S LWTLPMFH +GW FTW
Sbjct: 186 INYTSGTTGRPKGVMYHHRGAYLQSVAMAYHSGLGPGSKYLWTLPMFHCDGWCFTWAVIA 245
Query: 254 VGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPP 313
G T+VCLR D ++ + GVTH AP VL +++ P A +L V+ T G+PP
Sbjct: 246 AGGTSVCLRGIDTAQIWHHLVADGVTHFSAAPTVLTMIAEDPAATRLSTTVQAGTGGAPP 305
Query: 314 PAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLT 373
+L R LG V+H YG TE G V W+P+W+ ERA KARQG+ I
Sbjct: 306 SPALLARMARLGIEVTHLYGMTETFGPIVVNEWQPEWDDATDAERAERKARQGIGNIAAG 365
Query: 374 EVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHP 433
V +V + G+ V D T GE+V+RG ++MLGY +DP+AT+ DG TGD+ +MHP
Sbjct: 366 RVRVVTAD-GVDVPPDSATIGELVVRGNNVMLGYYRDPDATAAATLDGWLRTGDLAVMHP 424
Query: 434 DGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLK 493
DGY+EI+DRSKDVIISGGENI+S E+E VL SHP V E+AVVGRPD W E+P A+VS++
Sbjct: 425 DGYVEIRDRSKDVIISGGENIASVEVERVLDSHPDVVESAVVGRPDERWGEVPIAYVSVR 484
Query: 494 TGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
G T + ++++ R + R+ VPK VVF ELPKT+TGK+QK VL
Sbjct: 485 AGAS-----LTAEGLVEFARKTLARFKVPKEVVFA-ELPKTSTGKIQKNVL 529
>gi|441514734|ref|ZP_20996549.1| putative fatty-acid--CoA ligase [Gordonia amicalis NBRC 100051]
gi|441450492|dbj|GAC54510.1| putative fatty-acid--CoA ligase [Gordonia amicalis NBRC 100051]
Length = 559
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 207/557 (37%), Positives = 299/557 (53%), Gaps = 36/557 (6%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN L+PL F+ER+A D +I+Y T+++ +LA L++ I+ G V+
Sbjct: 23 ANRSELSPLRFLERSAAVFPDRAAILYGQRRLTYAEFADHVQRLARVLAT-KIHSGDRVA 81
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+APNIP M H+AVP++G + +N+RL + IL+HS +K ++ D + +
Sbjct: 82 YLAPNIPEMLIAHYAVPLAGGVLVALNSRLAGPELVYILQHSGAKALYFDAEFRDTVSAI 141
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
+ P + +V I D P + P D + L D + D
Sbjct: 142 IGQVP---EVETVVEIAD---------PEFGVTPGPVADAGIDGLVSYDDHLT---AADD 186
Query: 189 LDP-------------MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLW 235
LDP + +NYT GTT PKGV+ ++ ++ + S LW
Sbjct: 187 LDPAPIAWTVDDENAIISINYTSGTTGKPKGVMYTHRGAYLNSFGETFHNQFTGSSRYLW 246
Query: 236 TLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP 295
TLPMFH NGW W GAT+VCLR A ++ I GVTHMCGAP V + SP
Sbjct: 247 TLPMFHCNGWCTPWAVTHAGATHVCLRAVRADAIWDAIDDLGVTHMCGAPTVCTTIVGSP 306
Query: 296 EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
A L+RP+ I TAG+PP V+ E++G V H YG TE+ G C + W+ L
Sbjct: 307 RAHLLNRPLHITTAGAPPSPTVIGALEAIGVTVVHVYGLTEVYGPYTICEHQEAWSALEP 366
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETG--LSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
+RA+ ARQGV + +V PE + V DG+T GEIV+RG ++M GY +D +
Sbjct: 367 ADRAAKLARQGVGMVQAETARVVVPEQVPLVDVPADGETMGEIVLRGNNVMAGYFRDADE 426
Query: 414 TSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
T K G ++TGD+G+MHPDGY++++DR+KD+IISGGENIS+ E+E L SH V + A
Sbjct: 427 TRKAFAGGWFHTGDLGVMHPDGYIQLRDRAKDIIISGGENISTIEVEQALVSHDAVVDVA 486
Query: 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPK 533
V+G PD W E P A+V L+ G T +++I++ R + Y VP+ ++F DELP+
Sbjct: 487 VIGVPDEKWGERPRAYVLLQPGA-----TLTGEELIEHGRRLLAGYKVPRDIIFADELPR 541
Query: 534 TATGKVQKYVLGDIANS 550
T TGKV K L D A +
Sbjct: 542 TPTGKVLKGELRDRARA 558
>gi|424860765|ref|ZP_18284711.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
gi|356659237|gb|EHI39601.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
Length = 539
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 201/547 (36%), Positives = 294/547 (53%), Gaps = 23/547 (4%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTPL F+ RAA + ++I + T+T+++ QLA +L + GI G V+ +A N
Sbjct: 8 LTPLRFLARAAEVHPNKTAVIDGNRTWTYAEFAADVTQLAHALRASGIRVGDRVAYLASN 67
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
M HFAVP++G I INTRL A I+ I HSE++++ D +L
Sbjct: 68 SAEMLFAHFAVPLTGGILVAINTRLSAEEITYICDHSEARILIGD----------AALLR 117
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMV 193
+ P L + + E S ++P +Y +L +G + + +
Sbjct: 118 GLGEHPNLATVAEIVETPSQDGTYEQVPG---TTSYTGLLTRGHGEAIAWEVDDETRTIA 174
Query: 194 LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAV 253
+NYT GTT PKGV+ ++ ++ A+ L + LWTLPMFH NGW W
Sbjct: 175 INYTSGTTGRPKGVMYTHRGAYLNALGELHHQRFALDTKYLWTLPMFHCNGWCSAWAVTA 234
Query: 254 VGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPP 313
T+VCLR ++ LI + H+ GAP VL+LL+S+P+A L P+ I+TAG+PP
Sbjct: 235 AAGTHVCLRAVRGDAIWTLIDTEHINHLAGAPTVLSLLASAPQAHPLASPLLIVTAGAPP 294
Query: 314 PAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLT 373
+ SLG + H YG TE G C KP+W L +++ L ARQGV +
Sbjct: 295 SPTTIDEIRSLGATLVHVYGLTETYGPYSVCEEKPEWADLDPGQQSRLLARQGVGFLTAD 354
Query: 374 EVDIV-----DPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDV 428
+ +V D + V DG GEIVMRG ++M GY +DP T+ G +++GD+
Sbjct: 355 HLRVVREKLADDGSLTDVDSDGVEMGEIVMRGNNVMKGYYRDPAGTATAFSGGWFHSGDL 414
Query: 429 GMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCA 488
G+MHPDGY+++ DR+KDV+ISGGENIS+ E+E L SHP V + AV+G PD W E P A
Sbjct: 415 GVMHPDGYVQLLDRAKDVVISGGENISTIEVEQALMSHPAVADVAVIGVPDEKWGERPKA 474
Query: 489 FVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIA 548
FV L GT + ++++ + + RI Y P++V F+ ELPKT+TGK +K L D
Sbjct: 475 FVVLNPGTAG-----STEELVAHVKTRIASYKAPRSVEFLVELPKTSTGKTRKNELRDSE 529
Query: 549 NSMSMSH 555
+ SH
Sbjct: 530 WKDAESH 536
>gi|343925971|ref|ZP_08765486.1| putative fatty-acid--CoA ligase [Gordonia alkanivorans NBRC 16433]
gi|343764322|dbj|GAA12412.1| putative fatty-acid--CoA ligase [Gordonia alkanivorans NBRC 16433]
Length = 559
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 202/539 (37%), Positives = 299/539 (55%), Gaps = 18/539 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN L+PL F+ER+A D +IIY +T+++ +LA LS+ I PG V+
Sbjct: 23 ANRSELSPLRFLERSAAVFPDRAAIIYGQRRHTYAEFADHVQRLARVLSA-KIKPGDRVA 81
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+APNIP M H+AVP++G + +N+RL + IL+HS +K ++ D + +
Sbjct: 82 YLAPNIPEMLIAHYAVPLAGGVLVALNSRLAGPELVYILEHSGAKALYFDAEFRDTVAAI 141
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPA-DFVDTYENMLAKGDPQFSWVRPKS 187
+ + P++ + + + +P P D + +Y++ LA D + P +
Sbjct: 142 IG------QVPEVETVVEIADPEFGVTPGPVSDAGIDGLVSYDDHLASADDLDATPIPWT 195
Query: 188 DLDP---MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
D + +NYT GTT PKGV+ ++ ++ + S LWTLPMFH NG
Sbjct: 196 VDDENAIISINYTSGTTGKPKGVMYTHRGAYLNSFGETFHNQFTGSSRYLWTLPMFHCNG 255
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPV 304
W W GAT+VCLR A ++ I GVTHMCGAP V + SP A +LDRP+
Sbjct: 256 WCTPWAVTHAGATHVCLRAVRADAIWDAIDDLGVTHMCGAPTVCTTIVGSPRAHRLDRPL 315
Query: 305 RILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
I TAG+PP V+ E++G V H YG TE+ G C ++ W+ L +RA+ +R
Sbjct: 316 HITTAGAPPSPTVIGSLEAIGVTVVHVYGLTEVYGPYTICEYQDAWSALEPGDRAAKLSR 375
Query: 365 QGVRTIGLTEVDIV--DPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
QGV + +V D + V DG+T GEIV+RG ++M GY +D + T K G
Sbjct: 376 QGVGMVQAETARVVVADQVPLVDVPADGETMGEIVLRGNNVMAGYFRDEDETRKAFAGGW 435
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
++TGD+G+MHPDGY++++DR+KD+IISGGENIS+ E+E L SH V + AV+G D W
Sbjct: 436 FHTGDLGVMHPDGYIQLRDRAKDIIISGGENISTIEVEQALVSHDAVVDVAVIGVEDEKW 495
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
E P A+V L G T +++I++ R + Y VP+ +VF ELP+T TGKV K
Sbjct: 496 GERPRAYVLLHPGA-----TLTGEELIEHGRRLLAGYKVPRDIVFAHELPRTPTGKVLK 549
>gi|359772624|ref|ZP_09276047.1| putative fatty-acid--CoA ligase [Gordonia effusa NBRC 100432]
gi|359310253|dbj|GAB18825.1| putative fatty-acid--CoA ligase [Gordonia effusa NBRC 100432]
Length = 555
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 206/541 (38%), Positives = 304/541 (56%), Gaps = 19/541 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN LTPL F+ER+A D +I+Y YT+++ +LA+ L++ I PG ++
Sbjct: 22 ANRSELTPLRFLERSAEVFGDKTAIVYGRREYTYAEFADEAARLATVLAA-DIAPGDRIA 80
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
V+APNIP M HFAVP++ + +N+RL ++ IL H+E + D + ++
Sbjct: 81 VLAPNIPEMLIAHFAVPLARGVLVALNSRLAGPELAYILNHAEVTTLLFDAEFGDTVAQI 140
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
V P + T V I DD+ S ++P +P V Y+ L + D S P +
Sbjct: 141 VDHVPSLATT---VEIIDDQFGSDRTAPT--VPG---VVGYDEFLTRADDLDSTRLPWTV 192
Query: 189 LDP---MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGW 245
D + +NYT GTT PKGV+ ++ ++ + + LWTLPMFH NGW
Sbjct: 193 DDENQIIAINYTSGTTGKPKGVMYTHRGAYLNSFGETFHNQFTGSTRYLWTLPMFHCNGW 252
Query: 246 SFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVR 305
W T+VCLR A V+ I GVTH+CGAP V + + +A LDRP+
Sbjct: 253 CTPWAVTHAAGTHVCLRAVRADAVWDAIDHLGVTHLCGAPTVCTTIVGADQAHALDRPLH 312
Query: 306 ILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
I TAG+PP V+ + E++G V H YG TE+ G C ++ W++LP +RA+ +RQ
Sbjct: 313 ITTAGAPPSPTVIGKLEAIGVTVVHVYGLTEVYGPYTICEYQSAWDELPPDDRAARLSRQ 372
Query: 366 GVRTIGLTEVDIVDPET--GLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
GV + +V+ + + V DG GEIV+RG ++M GY K+P+AT++ G +
Sbjct: 373 GVGMVQAESARVVERDRIPLVDVAADGTAMGEIVLRGNNVMAGYFKNPDATAEAFAGGWF 432
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
+TGD+G+MHPDGY++++DR+KD+IISGGENIS+ E+E L SH V + AVVG PD W
Sbjct: 433 HTGDLGVMHPDGYIQLRDRAKDIIISGGENISTVEVEQALVSHDQVVDVAVVGVPDDKWG 492
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E P A+V L G D+I + R + Y VP+ +VF+ ELP+T+TGKV K+
Sbjct: 493 ERPRAYVQLGAGAS-----LAADDLIAHARKLLAGYKVPRDIVFVGELPRTSTGKVLKFE 547
Query: 544 L 544
L
Sbjct: 548 L 548
>gi|406890821|gb|EKD36612.1| hypothetical protein ACD_75C01439G0001 [uncultured bacterium]
Length = 425
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 178/380 (46%), Positives = 245/380 (64%), Gaps = 8/380 (2%)
Query: 167 DTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWV 226
+ YE LA P + + +NYT GTT PKGV+ ++ ++ A+ + +
Sbjct: 39 EEYEAFLAASSPTAPAIDIDDEYQVATINYTSGTTGRPKGVMYHHRGAYLNALGEIQEAG 98
Query: 227 VPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPI 286
+ +V LWTLPMFH NGW FTW VG T+VCLR+ +A +F LI V+H+C AP
Sbjct: 99 MMGDAVYLWTLPMFHCNGWCFTWAVTAVGGTHVCLRQVEASAIFRLIMTEKVSHLCAAPT 158
Query: 287 VLNLLSSSPEAK--QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSC 344
+L ++ S PEAK QL RP+ ILTAG+PP V+ + E+LG ++H YG TE+ G + C
Sbjct: 159 ILIMMVSYPEAKHLQLHRPLTILTAGAPPSPTVIEQIEALGAAITHVYGLTEVYGPHSVC 218
Query: 345 AWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLM 404
A + W+ + E A +K+RQGV + +D+VD T V RDG+T GEIVMRG ++M
Sbjct: 219 ARQDSWSSMAREELAKIKSRQGVAYVTALYMDVVDMVTMQPVPRDGKTMGEIVMRGNNVM 278
Query: 405 LGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLY 464
LGY KD +AT+ K G +++GD+ +MHPDGY++I DR KD+IISGGENISS E+E+V+Y
Sbjct: 279 LGYYKDEQATTDAFKGGWFHSGDLAVMHPDGYVQIMDRGKDIIISGGENISSIELENVIY 338
Query: 465 SHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKT 524
HP V E AVV PDP W E+P AFV+ K GT+ T ++II +C+A + R+ PK
Sbjct: 339 RHPKVQEVAVVSSPDPKWGEVPKAFVTPKPGTNP-----TVEEIIDFCKANLARFKAPKE 393
Query: 525 VVFIDELPKTATGKVQKYVL 544
VVF ELPKTATGK+ K+ L
Sbjct: 394 VVFC-ELPKTATGKITKFTL 412
>gi|284990824|ref|YP_003409378.1| AMP-dependent synthetase and ligase [Geodermatophilus obscurus DSM
43160]
gi|284064069|gb|ADB75007.1| AMP-dependent synthetase and ligase [Geodermatophilus obscurus DSM
43160]
Length = 521
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 205/544 (37%), Positives = 305/544 (56%), Gaps = 42/544 (7%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
+S LTP F+ER+A + +++ D +T+ + R +LA +L+S G++PG V+
Sbjct: 5 SSAQLTPTAFLERSARVFPERTAVVDGDRRFTYREFADRSRRLAGALASRGVSPGDRVAA 64
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+ N AM E+H VP +GA+ +NTRL + IL+HS + ++ D
Sbjct: 65 LCTNSSAMLEVHNGVPWAGAVLVPLNTRLKGNELEYILQHSGAAVLVAD----------- 113
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD- 188
+ F P + E++++ P + + D YE +L +P RP D
Sbjct: 114 AAFAPTAT-----------EVAAAVGIPVVVAGGE-ADEYEQLLDAAEP---LARPCDDE 158
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
+ LNYT GTT PKGV+ ++ ++ A+ + + S LWTLPMFH +GW F
Sbjct: 159 WGLLALNYTSGTTGRPKGVMYSHRGAYLQALAMALHTGLGPTSQYLWTLPMFHCDGWCFP 218
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDRPVRI 306
W + G+T+VCL + + ++ L+R G+TH AP VL +++S+ EA+ + V +
Sbjct: 219 WAVSAGGSTHVCLPRVEPARIWQLLRTEGITHFSAAPTVLTMIASAEEAEAGPVSPRVAV 278
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
T G+PP +L R +L V+H YG TE G W P+W+ LP +A LKARQG
Sbjct: 279 QTGGAPPTPTLLARMSALNMDVTHLYGLTETYGPVAVNQWHPEWDDLPDERQAELKARQG 338
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM------KD 420
V + + +V E G V DG+T GEIV RG +MLGY +D EAT+K
Sbjct: 339 VANVVAQPLRVVG-EDGADVPCDGETIGEIVARGNDVMLGYYQDEEATAKATLPGPDGGP 397
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G + TGD+ ++HPDGYLEI+DRSKD+IISGGENISS E+E L +HP V E+AVV P
Sbjct: 398 GWFRTGDLAVVHPDGYLEIRDRSKDIIISGGENISSVEVERALDAHPAVLESAVVAEPHE 457
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E+P A V+L+ G++ T++++ + R+R+ + VPK V+ ELPKT+TGKVQ
Sbjct: 458 KWGEVPVAHVTLRPGSE-----VTDEELAAFVRSRLAGFKVPKRFVY-GELPKTSTGKVQ 511
Query: 541 KYVL 544
K L
Sbjct: 512 KNEL 515
>gi|404257276|ref|ZP_10960603.1| putative fatty-acid--CoA ligase [Gordonia namibiensis NBRC 108229]
gi|403404270|dbj|GAB99012.1| putative fatty-acid--CoA ligase [Gordonia namibiensis NBRC 108229]
Length = 559
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 204/557 (36%), Positives = 297/557 (53%), Gaps = 36/557 (6%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN ++PL F+ER+A D +I+Y +T+++ +LA L+S I PG V+
Sbjct: 23 ANRSEMSPLRFLERSAAVFPDRAAILYGQRRHTYAEFADHVQRLARVLAS-KIKPGDRVA 81
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+APNIP M H+AVP++G + +N+RL + IL HS +K ++ D + +
Sbjct: 82 YLAPNIPEMLIAHYAVPLAGGVLVALNSRLAGPELVYILDHSGAKALYFDAEFRETVSAI 141
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
+ P + +V I D P + P D + L D + D
Sbjct: 142 IGQVP---EVETVVEIAD---------PEFGVTPGPVADAGIDGLVSYDDHMA---AAED 186
Query: 189 LDP-------------MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLW 235
LDP + +NYT GTT PKGV+ ++ ++ + S LW
Sbjct: 187 LDPTPIPWTVDDENTIISINYTSGTTGKPKGVMYTHRGAYLNSFGETFHNQFTGSSRYLW 246
Query: 236 TLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP 295
TLPMFH NGW W GAT+VCLR A ++ I GVTHMCGAP V + SP
Sbjct: 247 TLPMFHCNGWCTPWAVTHAGATHVCLRAVRADAIWDAIDDLGVTHMCGAPTVCTTIVGSP 306
Query: 296 EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
A +LDRP+ I TAG+PP V+ E++G V H YG TE+ G C ++ W L
Sbjct: 307 RAHRLDRPLHITTAGAPPSPTVIGSLEAIGVTVVHVYGLTEVYGPYTICEYQDAWGALEP 366
Query: 356 RERASLKARQGVRTIGLTEVDIV--DPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
+RA+ +RQGV + +V D + V DG+T GEIV+RG ++M GY +D E
Sbjct: 367 NDRAAKLSRQGVGMVQAETARVVVADQVPLVDVPADGETMGEIVLRGNNVMAGYFRDEEE 426
Query: 414 TSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
T K G ++TGD+G+MHPDGY++++DR+KD+IISGGENIS+ E+E L SH V + A
Sbjct: 427 TRKAFAGGWFHTGDLGVMHPDGYIQLRDRAKDIIISGGENISTIEVEQALVSHDAVLDVA 486
Query: 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPK 533
V+G D W E P A+V L+ G T ++++++ R + Y VP+ +VF +LP+
Sbjct: 487 VIGVADEKWGERPRAYVLLQPGA-----TLTAEELVEHGRRLLAGYKVPRDIVFAHDLPR 541
Query: 534 TATGKVQKYVLGDIANS 550
T TGKV K L + A +
Sbjct: 542 TPTGKVLKGELREQARA 558
>gi|404215452|ref|YP_006669647.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Gordonia
sp. KTR9]
gi|403646251|gb|AFR49491.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Gordonia
sp. KTR9]
Length = 538
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 195/535 (36%), Positives = 294/535 (54%), Gaps = 42/535 (7%)
Query: 13 PLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAP 72
PLTP+ ++ERAA +++ T+++ RC + A L+ G+ PG V+V+AP
Sbjct: 28 PLTPVTYLERAAVVHGHRIAVVDGPVRRTYAELLERCRRQAGLLAELGVGPGDRVAVLAP 87
Query: 73 NIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLF 132
N + E HF V M+GA+ T+NTRL A + I++H+ + ++ D S + + E + +
Sbjct: 88 NSAMLLEAHFGVAMAGAVVVTLNTRLAAAELRYIVEHAGADVLLYDD-SLAAVAETLGVA 146
Query: 133 PPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPM 192
T T D + S++ R+ + P+
Sbjct: 147 TAMDST------TYDNRVGSAAQLHRRL-------------------------TDERGPI 175
Query: 193 VLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAA 252
+NYT GTT PKGVV ++ ++ A+ + ++V LW LPMFH NGWSF W
Sbjct: 176 AINYTSGTTGKPKGVVYHHRGAYLQALSMAYHARLVPETVHLWVLPMFHCNGWSFPWAVT 235
Query: 253 VVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSP 312
G T+VC+RK D T++ I GVT M AP VL L++ A ++D P+ + T G+P
Sbjct: 236 AAGGTHVCVRKVDTGTIWEKILDEGVTSMNAAPTVLIDLAAHERAIRVDHPMAVGTGGAP 295
Query: 313 PPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGL 372
P +L L V+H YG TE G +V W+P+W+ LP E+A LK+RQG ++
Sbjct: 296 PSPSLLKALADLNISVTHLYGLTETFGPSVLREWQPEWDALPLTEQAVLKSRQGNASVVA 355
Query: 373 TEVDIV---DPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVG 429
+ +V DP + V DGQT GE+++RG ++ GY DP+ T G + TGD+
Sbjct: 356 QLLRVVPDGDPAR-VDVPPDGQTVGEVLIRGNTVAAGYHDDPDGTRDAFGGGWFRTGDLA 414
Query: 430 MMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAF 489
++HP G +E++DR KDVIISGGENI+S E+E + HP V+E AVVG P W E+P AF
Sbjct: 415 VVHPAGEIELRDRRKDVIISGGENIASIEVEQAMSRHPAVSEVAVVGAPHERWGEVPVAF 474
Query: 490 VSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
V+L++G + T ++I++ R + Y VP+ +VF D LPKT TGK+QK+ L
Sbjct: 475 VTLRSGQE-----VTADELIEFSRTHLAGYKVPRRIVFTD-LPKTGTGKIQKFAL 523
>gi|409388305|ref|ZP_11240282.1| putative fatty-acid--CoA ligase [Gordonia rubripertincta NBRC
101908]
gi|403201379|dbj|GAB83516.1| putative fatty-acid--CoA ligase [Gordonia rubripertincta NBRC
101908]
Length = 566
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 198/541 (36%), Positives = 301/541 (55%), Gaps = 22/541 (4%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN L+PL F+ER+A D +I+Y +++++ +LA L++ I PG V+
Sbjct: 30 ANRSELSPLRFLERSAAVFPDRAAILYGQRRHSYAEFADHVQRLARVLAT-KIEPGDRVA 88
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+APNIP M H+AVP++G + +N+RL + IL+HS +K+++ D + +
Sbjct: 89 YLAPNIPEMLIAHYAVPLAGGVLVALNSRLAGPELVYILEHSGAKVLYFDAEFRDTVAAI 148
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPA-DFVDTYENMLAKGD----PQFSWV 183
+ + P++ + + + +P P D + +Y++ LA D W
Sbjct: 149 IG------QVPEVETVVEIADPEFGVTPGPVSDAGIDGLVSYDDHLATADGLDPAPIPWT 202
Query: 184 RPKSDLDPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
D + ++ +NYT GTT PKGV+ ++ ++ + S LWTLPMFH
Sbjct: 203 --VGDENAIISINYTSGTTGKPKGVMYTHRGAYLNSFGETFHNQFTGSSRYLWTLPMFHC 260
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
NGW W GAT+VCLR A ++ I GVTHMCGAP V + SP A +LDR
Sbjct: 261 NGWCTPWAVTHAGATHVCLRAVRADAIWDAIDDLGVTHMCGAPTVCTTIVGSPRAHRLDR 320
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
P+ I TAG+PP V+ E++G V H YG TE+ G C ++ W+ L +RA+
Sbjct: 321 PLHITTAGAPPSPTVIGALEAIGVTVVHVYGLTEVYGPYTICEYQDAWSALEPGDRAAKL 380
Query: 363 ARQGVRTIGLTEVDIV--DPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
+RQGV + +V D + V DG+T GEIV+RG ++M GY +D + T K
Sbjct: 381 SRQGVGMVQAETARVVVADQVPLVDVPADGETMGEIVLRGNNVMAGYFRDEDETRKAFAG 440
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++TGD+G+MHPDGY++++DR+KD+IISGGENIS+ E+E L SH V + AV+G D
Sbjct: 441 GWFHTGDLGVMHPDGYIQLRDRAKDIIISGGENISTIEVEQALVSHDAVVDVAVIGVEDE 500
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E P A+V L+ G T +++I++ R + Y VP+ +VF +LP+T TGKV
Sbjct: 501 KWGERPRAYVLLQPGA-----TLTGEELIEHGRRLLAGYKVPRDIVFAHDLPRTPTGKVL 555
Query: 541 K 541
K
Sbjct: 556 K 556
>gi|377558374|ref|ZP_09787975.1| putative fatty-acid--CoA ligase [Gordonia otitidis NBRC 100426]
gi|377524449|dbj|GAB33140.1| putative fatty-acid--CoA ligase [Gordonia otitidis NBRC 100426]
Length = 562
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 206/556 (37%), Positives = 300/556 (53%), Gaps = 30/556 (5%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
DR+ AN LTPL F++R+ + +I Y + ++++ ++A L S
Sbjct: 19 FDRIDCGSANRSELTPLRFLQRSVDVFGERTAIRYGARSVSYAELGDEVQRVARVLRST- 77
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I PG ++ +APN+P + HFAVP++G + +N+RL + IL H+ +F D
Sbjct: 78 IRPGERIAYLAPNVPELLVAHFAVPLAGGVLVALNSRLAGPELVYILNHAGVTTLFFDAE 137
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADF-------VDTYENML 173
+ + P +T EI+ P P D + +Y +
Sbjct: 138 YRHTVAAIADEVPE---------VTSYIEIADPEFGPV---PGDVDASGIGGLRSYAEYV 185
Query: 174 AKGDPQFSWVRPKS--DLDPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQ 230
A D P + D D ++ +NYT GTT PKGV+ ++ ++ A+ +
Sbjct: 186 ASADELDQAPLPWTVDDEDRVISINYTSGTTGKPKGVMYTHRGAYLNALGEMHHNHFTGT 245
Query: 231 SVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNL 290
+ LWTLPMFH NGW W A +VCLR V+ I GVT++CGAP VL
Sbjct: 246 TRYLWTLPMFHCNGWCTPWAVTAASAMHVCLRLVRGDAVWDAIDDLGVTNLCGAPTVLIT 305
Query: 291 LSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKW 350
++ SP A +LD P+RI TAG+PP V+ +L V H YG TE G C ++ W
Sbjct: 306 IAGSPRAHRLDAPLRITTAGAPPSPTVIGALAALDIAVVHVYGLTESYGPYTICEYQEAW 365
Query: 351 NKLPARERASLKARQGVRTIGLTEVDIVDPETG--LSVKRDGQTRGEIVMRGGSLMLGYL 408
N L A +RA+ + QGV + V +V+ T + V DG+T GEIVMRG ++M GY
Sbjct: 366 NDLDAADRATKLSLQGVGMVQAEPVRVVEQGTVPLVDVPADGETIGEIVMRGNNIMAGYF 425
Query: 409 KDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPM 468
KDPE+T K + G ++TGD+G+MHPDGY++++DR+KD+IISGGENIS+ E+E L SH
Sbjct: 426 KDPESTRKAFEGGWFHTGDLGVMHPDGYIQLRDRAKDIIISGGENISTIEVEQALVSHDS 485
Query: 469 VNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFI 528
V + AVVG PD W E P A+V LK G T +++I Y R + Y +P+ +VF
Sbjct: 486 VLDVAVVGVPDEKWGERPRAYVLLKEGQS-----LTAEELIDYARTLLAGYKIPRDIVFA 540
Query: 529 DELPKTATGKVQKYVL 544
DELP+T+TGKV K+ L
Sbjct: 541 DELPRTSTGKVLKFEL 556
>gi|297564269|ref|YP_003683242.1| AMP-dependent synthetase and ligase [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296848718|gb|ADH70736.1| AMP-dependent synthetase and ligase [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 523
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 209/543 (38%), Positives = 308/543 (56%), Gaps = 30/543 (5%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTPL F R +++ T+ + + RC + + +L + G++ G V+ I+PN
Sbjct: 5 LTPLEFARRTRRLHPRREAVVDRGLRLTYEEFFDRCDRWSRALQNMGVSKGDRVAYISPN 64
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
A E +AVP GA+ +N RL A I+ HS ++++ V H ++ V
Sbjct: 65 THAQLESFYAVPQLGAVLVPVNFRLSADDFVYIVNHSGARVLCV-HADQLDAVDGV---- 119
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD-LDPM 192
+ P + ++ ++ + P + YE ++A+ ++ RP+ D D +
Sbjct: 120 -RDQMPDV-----ERFVALEGARPGW-------EDYETLVAQSTADYT--RPEIDETDLL 164
Query: 193 VLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAA 252
+NYT GTT+ PKGV+ ++ ++ +V +L+ + LWTLPMFH NGW++TW
Sbjct: 165 TINYTSGTTARPKGVMITHRNAYMNSVGTLLHLRIGIDDRYLWTLPMFHANGWTYTWTVT 224
Query: 253 VVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP--VRILTAG 310
A +VCL D TV+ LIR GVT +C AP VL +LS++PE + + P V ++TAG
Sbjct: 225 AAAAAHVCLPAMDPATVYELIRSEGVTWLCAAPTVLIMLSNAPEEVRGEVPSGVHVVTAG 284
Query: 311 SPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRT 369
+ P A + R E G+ V+H YG TE C + + L R+RA++KARQGV
Sbjct: 285 ASPAADTIERLEDGFGWTVTHVYGLTETTPFITVCEPRAEHGGLSPRDRAAVKARQGVEL 344
Query: 370 IGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVG 429
I E+ +VD + G+ V DG T GEI +RG +M GY DPEAT K M DG ++TGD
Sbjct: 345 ITSGELRVVDAD-GVEVPWDGTTVGEITVRGNVVMKGYYNDPEATRKAMGDGWFHTGDAA 403
Query: 430 MMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAF 489
+ HPDGY+EI+DR KDVIISGGENISS E+E VL HP V EAAVVG P W E P A
Sbjct: 404 VTHPDGYVEIQDRIKDVIISGGENISSVEVEGVLLRHPAVLEAAVVGVPHERWGESPKAS 463
Query: 490 VSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIAN 549
V L+ G + TE+++I + R + + P V F+++LPKTATGK+QK+VL A+
Sbjct: 464 VVLREGAAA-----TEEELIAFARDNLAHFKAPTQVEFVEQLPKTATGKIQKFVLRGGAS 518
Query: 550 SMS 552
++S
Sbjct: 519 AVS 521
>gi|407279809|ref|ZP_11108279.1| fatty-acid--CoA ligase [Rhodococcus sp. P14]
Length = 542
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 205/538 (38%), Positives = 305/538 (56%), Gaps = 19/538 (3%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN L+PL F+ER+A+ D +II+ D YT+ + LA L+S I PG V+
Sbjct: 6 ANHSQLSPLRFLERSASVFPDRTAIIHGDRRYTYREFGDEVQHLAKVLASR-IEPGDRVA 64
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
++PN P + HFAVP++G + +N+RL + IL HS + ++FVD S L
Sbjct: 65 YLSPNTPELLMAHFAVPLAGGVLIALNSRLAPAELEYILDHSGASILFVD---SEFLTSA 121
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG--DPQFSWVRPK 186
++ T + +T+ EI S+ TY ++LA WV
Sbjct: 122 ATI------TTAVPSVTEIVEIPDSTITIEHPVTGVATTTYADLLAADITAAPLPWVV-A 174
Query: 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
+L P+ +NYT GTT PKGV+ ++ ++ +V + LWTLPMFH NGW
Sbjct: 175 DELTPIAINYTSGTTGKPKGVMYSHRGAYLNSVGETFHNGFTGDTKYLWTLPMFHCNGWC 234
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRI 306
W G T+VCLR A ++ I G+T++CGAP V + ++ + +A L P+RI
Sbjct: 235 TPWAVTAAGGTHVCLRAVRAEPIWEAIDTLGITNLCGAPTVCSTIADAAQAHPLTTPLRI 294
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
TAG+PP ++ + E+LG V H YG TE+ G C + W L ERA L +RQG
Sbjct: 295 TTAGAPPSPTIIGKLEALGVAVIHVYGLTEVYGPYTICEPQESWAGLDPAERAVLISRQG 354
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
V + +VDP+ V DG + GEIV+RG ++MLGY +D EAT+K G ++TG
Sbjct: 355 VGMLQAETARVVDPQMN-DVPADGVSLGEIVLRGNNVMLGYYRDEEATAKAFAGGWFHTG 413
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+G+MHPDGY+++KDR+KD+IISGGENIS+ E+E + +HP V + AVVG PD W E P
Sbjct: 414 DLGVMHPDGYIQLKDRAKDIIISGGENISTVEVEQAIVAHPAVADVAVVGVPDDKWGERP 473
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
AFV ++ G++ + +++I + R + Y +P+ +VF +LP+T+TGKV+K L
Sbjct: 474 KAFVLVRPGSE-----VSAEELIAHTRGLLAGYKIPRDIVFASDLPRTSTGKVRKNEL 526
>gi|68535535|ref|YP_250240.1| acyl-CoA synthetase [Corynebacterium jeikeium K411]
gi|68263134|emb|CAI36622.1| acyl-CoA synthetase [Corynebacterium jeikeium K411]
Length = 557
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 203/545 (37%), Positives = 296/545 (54%), Gaps = 13/545 (2%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
+ PLTPL F++R+A + + + T+++ A +L + + G V ++
Sbjct: 10 NAPLTPLRFLQRSAQVHPNKIAAVDGPRRITFAEFNEDAQAFAHALIADQVAEGDRVGIL 69
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVS 130
A N FAVP++ A+ INTRL + ++ IL HS +D L L
Sbjct: 70 AANSYEALLAQFAVPLANAVTVPINTRLAPKEVNYILDHSS-----IDVLVGEKELIDPI 124
Query: 131 LFPPHSKTPKLVLITDDKEIS-SSSSPPPRIPPADFVDTYENMLA-KGDPQFSWVRPKSD 188
L + V I D + + A V T+ + LA D + R + +
Sbjct: 125 LASGERNLRRAVYIADKEGVEPQVEKGETEAQGASLVTTFSDYLAGHRDEEPLPYRVRDE 184
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
+ + +NYT GTT PKGV+ ++ ++ A+ +V LWTLPMFH +GW
Sbjct: 185 NETIAINYTSGTTGKPKGVIYTHRGAYLNALGQAHTQHFSHDTVYLWTLPMFHCSGWCTG 244
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILT 308
W A V AT V LR P ++ LIR GVT MCGAP VLN L E K+ +R+ T
Sbjct: 245 WAAMAVSATQVALRAVRGPEMWELIRTEGVTAMCGAPAVLNTLVDD-ENKRRVTNLRVTT 303
Query: 309 AGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVR 368
AG+PP + R E++G V+H YG TE G C +P+W + R RA LKARQGV
Sbjct: 304 AGAPPSPTTITRCENIGVEVTHVYGLTESYGPFTVCEAQPEWADMTVRRRAVLKARQGVA 363
Query: 369 TIGLTEVDIVDP-----ETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
+I +V +++P E + V DG T GEI++ G +M GY KD EAT+ + G +
Sbjct: 364 SITNEDVRVIEPTEHLDEALVDVPADGATLGEIILTGNGIMAGYFKDEEATAHAFRGGWF 423
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
+TGD+G+MHP+GY+++ DR+KDV++SGGENIS+ E+E + SHP V++ AV+G PD W
Sbjct: 424 HTGDLGVMHPNGYIQLMDRAKDVVVSGGENISTIEVEQAVISHPDVSDCAVIGVPDEKWG 483
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E P A+V+L+ G E+ +I YCRA I Y VP+ V +DELP+T+TGKV+K
Sbjct: 484 ERPRAYVTLRPEARGGDESALEEAVIAYCRAHIAGYKVPRDVRILDELPRTSTGKVRKNE 543
Query: 544 LGDIA 548
L + A
Sbjct: 544 LREEA 548
>gi|6573716|gb|AAF17636.1|AC009978_12 T23E18.22 [Arabidopsis thaliana]
Length = 516
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 201/554 (36%), Positives = 304/554 (54%), Gaps = 54/554 (9%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN PL+P+ F+ERAA S++Y D YTW QT RC++LAS+LS G++ VV+
Sbjct: 9 ANYVPLSPISFLERAAVVFGSRTSVVYGDIQYTWHQTRDRCVRLASALSDLGLSRHDVVA 68
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
+APN+PA+ EL+F PM+GA+ +NT D++ +++ L+ ++ K+ FVD S+ E
Sbjct: 69 ALAPNVPALCELYFGAPMAGAVLCVLNTTFDSQMLAMALEKTKPKVFFVDSEFLSVAEES 128
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
+SL + P ++ IT++ S + YE+ L+ G+P F +RP +
Sbjct: 129 LSLLSNIEEKPLIITITENPTEQSK------------YEQYEDFLSTGNPNFKPIRPVDE 176
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
DP+ LN+T GTTS PK VV ++ ++ A + + V L T+PM+H +GW +
Sbjct: 177 CDPIALNFTSGTTSTPKCVVYSHRGAYLNATAVGVMNEMKPMPVYLCTVPMYHCSGWCYI 236
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP--VRI 306
W G VCLR+ + +F I KH VT+ G+P VLN+++++ ++ + P V++
Sbjct: 237 WTVTAFGGVIVCLREVNDEVIFDSIVKHKVTNFGGSPPVLNMIANARDSVKKSFPWTVQV 296
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
++ GS PP V+L+ + LGF V YG +E+ G+ +C W P+W LP E LKAR G
Sbjct: 297 MSGGSSPPE-VMLKLKKLGFKVMMAYGCSEVYGLGTACLWMPEWETLPEEESLRLKARDG 355
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
+ VD++DP T SV DG+T I +RG ++M GY KD EAT + G Y++
Sbjct: 356 LNHFAKEAVDVLDPTTMKSVPHDGKTIRVIALRGNTVMSGYFKDKEATEAAFRGGWYWSR 415
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+G++ PDG HP V +A VVGRPD E
Sbjct: 416 DMGVIDPDG------------------------------HPAVYDAGVVGRPDETLGESM 445
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPR---YMVPKTVVFIDELPKTATGKVQKYV 543
CAFV LK G E++II++C+ ++ M+PKTVVF D +PKT TGK++K V
Sbjct: 446 CAFVKLKEGA-----EAREEEIIEFCKRKLGNKNMKMIPKTVVFSD-VPKTPTGKIRKNV 499
Query: 544 LGDIANSMSMSHSR 557
L +A M R
Sbjct: 500 LRKMAKDMGYVQLR 513
>gi|323457170|gb|EGB13036.1| hypothetical protein AURANDRAFT_58580 [Aureococcus anophagefferens]
Length = 501
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 204/550 (37%), Positives = 279/550 (50%), Gaps = 77/550 (14%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN LTPL ++ERAA DD P+++ D T TW++T+ RC L +L G G VV
Sbjct: 22 ANYRELTPLSYVERAAVVFDDSPAVVDGDATRTWAETFARCCGLGDALRREGCGRGDVVQ 81
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD-HLSSSLLLE 127
V+ N M E VPMSGA +NTRLDA T++ +L+HSE++++ D + +
Sbjct: 82 VMLDNTAEMVEAQHGVPMSGATLGCVNTRLDAATVAYVLEHSEARVLVADARYAGTYGPA 141
Query: 128 VVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKS 187
+ +L P P+LV++ P A TYE +A GD +VRP+
Sbjct: 142 LAALANP----PRLVVVGG--------------PGA----TYEAFVASGDAGSGFVRPRD 179
Query: 188 DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSF 247
+ D + +NYT FH NGW F
Sbjct: 180 EWDALAVNYT------------------------------------------FHCNGWGF 197
Query: 248 TWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE------AKQLD 301
W VG NVCLR A + VTH+CGAP+V+ + +
Sbjct: 198 PWTLPAVGGANVCLRDVSADAIADAFVAARVTHLCGAPVVVRTAIEAAAATRAARGGERA 257
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
P+R++T G+PPPA L R E+ G V+H YG TE G C + KW L A
Sbjct: 258 APLRMMTGGAPPPAATLRRAEAAGLDVTHVYGLTETYGPATLCQPRAKWAALTDAAAAEK 317
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
++RQGV VD++D +TG V DG T GEI RG +M GYLKD AT+ + G
Sbjct: 318 RSRQGVAHAATGGVDVLDRDTGAPVPADGATMGEICFRGNIVMKGYLKDAAATAAAFRLG 377
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GD+ + H DGY++IKDRSKD+IISGGENIS+ EIE+ L H V E AVV RPD
Sbjct: 378 AFASGDLAVKHADGYVQIKDRSKDIIISGGENISTVEIEAALMEHDDVEECAVVARPDAH 437
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E PCAFV + G E ++ + + R+ + PK+VVF LPKT+TGK+QK
Sbjct: 438 WGETPCAFVETRAGA-----TLDEASLLAFAKGRLAGFKAPKSVVF-GALPKTSTGKIQK 491
Query: 542 YVLGDIANSM 551
+ L D A ++
Sbjct: 492 FALRDRARAL 501
>gi|326402856|ref|YP_004282937.1| putative fatty-acid--CoA ligase, partial [Acidiphilium multivorum
AIU301]
gi|325049717|dbj|BAJ80055.1| putative fatty-acid--CoA ligase [Acidiphilium multivorum AIU301]
Length = 382
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 186/385 (48%), Positives = 248/385 (64%), Gaps = 9/385 (2%)
Query: 169 YENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVP 228
YE+ LA G F W P + + LNYT GTT PKGVV ++ ++ + + I W +
Sbjct: 3 YEDFLATGTADFDWRFPDDEWSAIALNYTSGTTGKPKGVVYHHRGAYLNGLGNAITWNMR 62
Query: 229 KQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVL 288
+ V LWTLPMFH NGW F W + T+VCLR+ DA ++ A + +HGVTH+CGAP+++
Sbjct: 63 QHPVYLWTLPMFHCNGWCFPWTITALAGTHVCLRRIDAASIAAAVERHGVTHLCGAPVIM 122
Query: 289 NLLSSSPEAKQL---DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCA 345
N++ ++PE ++ R V ++TAG+PPPA V+ E LG ++H YG TE G CA
Sbjct: 123 NMMINAPEPQRAVYAGRGVAMMTAGAPPPAAVIEAMEGLGVDLTHVYGLTETYGPVTYCA 182
Query: 346 WKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLML 405
W+ WN PA ERA+L+ARQGV + DP T V DG T GE+ +RG +M+
Sbjct: 183 WQEDWNGRPAAERAALRARQGVTYAVEEGAMVADPATRAPVPADGTTMGEVFLRGNIVMM 242
Query: 406 GYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYS 465
GYLKD AT K G + TGD+G+MHPDGY+E+KDRSKD+IISGGENIS+ EIE+VLY
Sbjct: 243 GYLKDAAATEKSFAGGWFATGDLGVMHPDGYIELKDRSKDIIISGGENISTIEIETVLYR 302
Query: 466 HPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTV 525
HP V EAAVV PD W E+PCAFV L+ M T ++II +CR + + PK +
Sbjct: 303 HPAVLEAAVVAAPDEKWGEVPCAFVVLRP-----DMTATAEEIIAFCRQNMAHFKAPKRI 357
Query: 526 VFIDELPKTATGKVQKYVLGDIANS 550
VF ELPKT+TGK+QKYVL + A +
Sbjct: 358 VF-SELPKTSTGKIQKYVLRERARA 381
>gi|409358188|ref|ZP_11236551.1| acyl-CoA synthetase [Dietzia alimentaria 72]
Length = 543
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 199/551 (36%), Positives = 300/551 (54%), Gaps = 23/551 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
+ N L+PLGF+E+AA D +++ T+++ R +LA+ L G++
Sbjct: 1 MTANSGLDTALSPLGFLEKAARVSPDATAVVDGPRRQTYAEFAERATRLAALLKMRGVSR 60
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V V+APN F +P++GA +NTRL ++ I+KH+ +++ D +
Sbjct: 61 GDRVGVLAPNSAEALLAQFGIPLAGAAVVALNTRLAPAEVAYIVKHAGIEVLIAD---AE 117
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP-QFSW 182
LL + P + + D + +SS P + +E+ LA P Q SW
Sbjct: 118 LLAGLGDELPAELRLILVAPDADGTQPDASSFGP-------VAEAFEDGLALASPRQVSW 170
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
D + +NYT GTT PKGV+ ++ ++ A+ +I + S LWTLPMFH
Sbjct: 171 AVDDED-SVIAVNYTSGTTGRPKGVMYTHRGAYLNALGEIITQNLDADSNYLWTLPMFHC 229
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
NGW TW T+VCLR ++ L GV + GAP VL+ ++ P A+ + +
Sbjct: 230 NGWCTTWAMTGARGTHVCLRAVRGDEIWRLFDAEGVNRLAGAPAVLSTIADDPAARPV-K 288
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
+ ++TAG+PP +L R E LG V+ YG TE G C +P+W++L ERA+LK
Sbjct: 289 GISMVTAGAPPSPTILRRFEDLGIEVTQVYGLTETYGPFTVCTPQPRWHELDPDERAALK 348
Query: 363 ARQGVRTIGLTEVDIVDPETG-----LSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+RQGV I V +V+ + + V DG T GE+VM G +M GY +D EAT
Sbjct: 349 SRQGVAMIHADTVRVVERTSPGEKHLVDVPADGVTMGEVVMTGNGVMKGYFEDAEATKVA 408
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G +++GD+G+MHPDGY+++ DR+KDV++SGGENIS+ E+E + SHP V + AVV
Sbjct: 409 FAGGWFHSGDLGVMHPDGYIQLLDRAKDVVVSGGENISTIEVEQAIASHPDVVDCAVVSM 468
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD W E P A+V ++ G+D E +I++CR +I RY VP V + LP+T+TG
Sbjct: 469 PDEKWGERPKAYVVVRPGSD-----LDETGVIEHCRTKIARYKVPGAVELTEALPRTSTG 523
Query: 538 KVQKYVLGDIA 548
KV+K L D A
Sbjct: 524 KVRKNELRDAA 534
>gi|377564146|ref|ZP_09793471.1| putative fatty-acid--CoA ligase [Gordonia sputi NBRC 100414]
gi|377528635|dbj|GAB38636.1| putative fatty-acid--CoA ligase [Gordonia sputi NBRC 100414]
Length = 561
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 206/556 (37%), Positives = 301/556 (54%), Gaps = 34/556 (6%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
R+ AN +TPL F++R+ D +I Y + T+++ +LA L S I+
Sbjct: 20 RIDCGTANRSEMTPLRFLQRSVEVFGDRTAIRYGARSATYTELGDEVQRLARVLEST-IS 78
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
PG ++ +APN+P + HFAVP++G + +N+RL + IL H+ +F D
Sbjct: 79 PGERIAYLAPNVPELLVAHFAVPLAGGVLVALNSRLAGPELVHILNHAGVTTLFFDAEFR 138
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADF-------VDTYENMLAK 175
+ + P +T EI+ PP PAD + +Y + LA
Sbjct: 139 HTVASIADEVPD---------VTSYVEITDPEFGPP---PADVESSGIGGLRSYADFLAA 186
Query: 176 GDPQFSWVRPKS--DLDPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSV 232
D S P + D D ++ +NYT GTT PKGV+ ++ ++ A+ + +
Sbjct: 187 ADTLDSTPLPWTVDDEDRVISINYTSGTTGKPKGVMYTHRGAYLNALGEMHHNQFTGSTR 246
Query: 233 LLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLS 292
LWTLPMFH NGW W A +VCLR A V+ I GVT++CGAP VL ++
Sbjct: 247 YLWTLPMFHCNGWCTPWAVTAASAMHVCLRLVRADAVWDAIDDLGVTNLCGAPTVLITIA 306
Query: 293 SSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNK 352
SP A +LD P+RI TAG+PP V+ +L V H YG TE G C ++ W+
Sbjct: 307 GSPRAHRLDAPLRITTAGAPPSPTVIAALAALDISVVHVYGLTESYGPYTICEYQESWDD 366
Query: 353 LPARERASLKARQGVRTIGLTEVDIVDPETGL----SVKRDGQTRGEIVMRGGSLMLGYL 408
L +RA+ + QGV + +V E G+ V DG T GEIV+RG ++M GY
Sbjct: 367 LDPADRAAKLSLQGVGMVQAEPARVV--ERGVVPLVDVPADGSTIGEIVLRGNNIMAGYF 424
Query: 409 KDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPM 468
KDP+AT + + G ++TGD+G+MHPDGY++++DR+KD+IISGGENIS+ E+E L SH
Sbjct: 425 KDPDATRQAFEGGWFHTGDLGVMHPDGYIQLRDRAKDIIISGGENISTIEVEQALVSHDA 484
Query: 469 VNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFI 528
V + AVVG PD W E A+V LK G + ++I+Y R + Y +P+ +VF
Sbjct: 485 VLDVAVVGVPDEKWGERARAYVLLKEGRS-----LSSDELIEYARTLLAGYKIPRDIVFA 539
Query: 529 DELPKTATGKVQKYVL 544
DELP+T+TGKV K+ L
Sbjct: 540 DELPRTSTGKVLKFEL 555
>gi|338991912|ref|ZP_08634705.1| AMP-dependent synthetase and ligase [Acidiphilium sp. PM]
gi|338205163|gb|EGO93506.1| AMP-dependent synthetase and ligase [Acidiphilium sp. PM]
Length = 393
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 184/378 (48%), Positives = 244/378 (64%), Gaps = 9/378 (2%)
Query: 169 YENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVP 228
YE+ LA G F W P + + LNYT GTT PKGVV ++ ++ + + I W +
Sbjct: 22 YEDFLATGTADFDWCFPDDEWSAIALNYTSGTTGKPKGVVYHHRGAYLNGLGNAITWNMR 81
Query: 229 KQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVL 288
+ V LWTLPMFH NGW F W + T+VCLR+ DA ++ A + +HGVTH+CGAP+++
Sbjct: 82 QHPVYLWTLPMFHCNGWCFPWTITALAGTHVCLRRIDAASIAAAVERHGVTHLCGAPVIM 141
Query: 289 NLLSSSPEAKQL---DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCA 345
N++ ++PE ++ R V ++TAG+PPPA V+ E LG ++H YG TE G CA
Sbjct: 142 NMMINAPEPQRAVYAGRGVAMMTAGAPPPAAVIEAMEGLGVDLTHVYGLTETYGPVTYCA 201
Query: 346 WKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLML 405
W+ WN PA ERA+L+ARQGV + DP T V DG T GE+ +RG +M+
Sbjct: 202 WQEDWNGRPAAERAALRARQGVTYAVEEGAMVADPATRAPVPADGTTMGEVFLRGNIVMM 261
Query: 406 GYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYS 465
GYLKD AT K G + TGD+G+MHPDGY+E+KDRSKD+IISGGENIS+ EIE+VLY
Sbjct: 262 GYLKDAAATEKSFAGGWFATGDLGVMHPDGYIELKDRSKDIIISGGENISTIEIETVLYR 321
Query: 466 HPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTV 525
HP V EAAVV PD W E+PCAFV L+ M T ++II +CR + + PK +
Sbjct: 322 HPAVLEAAVVAAPDEKWGEVPCAFVVLRP-----DMTATAEEIIAFCRQNMAHFKAPKRI 376
Query: 526 VFIDELPKTATGKVQKYV 543
VF ELPKT+TGK+QKYV
Sbjct: 377 VF-SELPKTSTGKIQKYV 393
>gi|326383602|ref|ZP_08205288.1| AMP-binding enzyme family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326197686|gb|EGD54874.1| AMP-binding enzyme family protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 531
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 199/540 (36%), Positives = 294/540 (54%), Gaps = 34/540 (6%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVV 67
AN PL+PL F+ R A D +++ + TW+ R +LA +L + G+ G V
Sbjct: 13 ANDVPLSPLSFLLRMAEIKGDDEALVTDSGRVLTWADLLDRAERLAGALRAAGVRDGERV 72
Query: 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLE 127
+V+APN + E H+ VP +GA+ +NTRL + +L+ S+ +++ VD + +
Sbjct: 73 AVLAPNDAPLLEAHYGVPGAGAVLVALNTRLSLAEYADLLRRSDVRVLIVDEALADRV-- 130
Query: 128 VVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR-PK 186
P + I + + + + P D YE LA Q +R P
Sbjct: 131 ----------EPVIAGIDGLRCVVTVADRP---------DGYEAWLAAA--QAVPLRLPD 169
Query: 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
+ P+ +N+T GTT+ PKG V ++ ++ A+ ++ + S LWTLPMFH +GW
Sbjct: 170 DERAPLAINFTSGTTAGPKGAVYTHRGCYLNAMSQVVAMNLRADSTYLWTLPMFHCSGWC 229
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPEAKQLDRPV 304
FTW VGA +V LRK D V LI ++ VTH+CGAP+VLN L +S +L V
Sbjct: 230 FTWAVTAVGARHVALRKVDPDRVLDLIGRYDVTHLCGAPVVLNGLVEASRRRTAELGAEV 289
Query: 305 RILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
G+PP + +G + H YG TE G ++ C +P+W +L A A +R
Sbjct: 290 TFAVGGAPPTPAAIAEMREIGVEIVHLYGMTETYGPSLVCELRPEWAELDASALARKVSR 349
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYY 424
QGVRT+ + +V + V DG+T GE+ +R +++ YL D EAT++ G +
Sbjct: 350 QGVRTLSVESARVVTGDL-RDVPADGETPGELAIRSNTVISHYLDDLEATARAFAGGWLH 408
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
TGD + HPDGY+EI+DR KDVIISGGENISS E+E+ L HP V E+AVV R P W E
Sbjct: 409 TGDAAVRHPDGYIEIRDRIKDVIISGGENISSIEVENALADHPAVRESAVVARAHPKWGE 468
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
+P A V+L+ G + ++ ++I + R RI + VP +VF ELPKTATGK+QK L
Sbjct: 469 VPVAHVALRDGA-----VVSDHELIDWLRDRIAHFKVPAAIVF-GELPKTATGKIQKSEL 522
>gi|15805365|ref|NP_294059.1| fatty-acid--CoA ligase [Deinococcus radiodurans R1]
gi|6458013|gb|AAF09918.1|AE001894_2 fatty-acid--CoA ligase, putative [Deinococcus radiodurans R1]
Length = 524
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 198/535 (37%), Positives = 298/535 (55%), Gaps = 28/535 (5%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
+ PLTPL + R D ++I +T+ + RR QLA ++ + G HV +V
Sbjct: 4 NTPLTPLTLVRRGLKLYPDHTAVIEPGGPRFTYREWGRRIYQLARAIQAAGYGGQHV-AV 62
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
++PN + VP +G++ +NTRL L+H+E +L+ VD + EV
Sbjct: 63 LSPNTHGGLLTYAGVPWAGSVLVPLNTRLTPEEYEFQLRHAEVRLLLVDESLHDRVREVA 122
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDL 189
+ V + D + ++ +E LA D + + +
Sbjct: 123 AGLGIE------VWVMGDARGAGTA--------------FEAKLAAQDDSPLPLPVQDEN 162
Query: 190 DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249
+ LN+T GTTS PKGV+ +++ + A++++ + + +V L TLP FH NGW W
Sbjct: 163 GTITLNFTSGTTSDPKGVMMTHRSTMLNAIETIYYFKADQDTVYLHTLPDFHANGWGGVW 222
Query: 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTA 309
VGAT+V L A + I +HGVTH+C AP VL++L+ A+ L R +R+ TA
Sbjct: 223 SPFGVGATHVTLPTVRADAAYDAIEQHGVTHLCAAPTVLSMLTDPAHARPLSRQIRVATA 282
Query: 310 GSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRT 369
GSPP A ++ +LGF V+ YG TE + + + +LP RA+L A+QGV
Sbjct: 283 GSPPHARIIADMNALGFHVTQVYGLTETSPLITVAELSAQQEELPTPRRAALIAKQGVEM 342
Query: 370 IGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVG 429
I EV+++DPE V DG+T GEI++RG +M GY ++ EAT+K ++ G ++TGDV
Sbjct: 343 ILAGEVEVLDPEL-RPVPGDGETLGEIMVRGNLVMKGYYRNEEATAKALEGGWFHTGDVA 401
Query: 430 MMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAF 489
++HPDG +EI+DR+KDVIISGGENISS E+E VLY+HP V EA VV P W E+PCAF
Sbjct: 402 VVHPDGRIEIRDRNKDVIISGGENISSVEVEGVLYAHPAVREAVVVAMPHEKWGEVPCAF 461
Query: 490 VSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
++L G + T +D+ + R + + VPK F D+LPKTA+GK QK++L
Sbjct: 462 IALHQGQE-----VTPEDLTAHVREHLAGFKVPKHYEFRDDLPKTASGKFQKFIL 511
>gi|296083814|emb|CBI24031.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 167/286 (58%), Positives = 197/286 (68%), Gaps = 47/286 (16%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
M+ LKP PANS PLT L F++RAAT DCPS++YN TTYTWSQT+ RCLQ+ASS+ S G
Sbjct: 40 MEELKPRPANSSPLTTLSFLDRAATVYGDCPSVVYNSTTYTWSQTHHRCLQVASSIKSLG 99
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I G VVSV+APNIPAMYELHFAVPM+GA+ NTINTRLDA+T+S++L+HSESKL+FVD+
Sbjct: 100 IGRGQVVSVVAPNIPAMYELHFAVPMAGAVLNTINTRLDAKTVSVLLRHSESKLIFVDYQ 159
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
S L+LE +SLFPP S+ P L
Sbjct: 160 SRPLILESLSLFPPSSQRPLL--------------------------------------- 180
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
W +PM+LNYT GTTS+PKGVV C++ FI+ VDSLIDW VPKQ V LWTLPMF
Sbjct: 181 -W-------NPMILNYTSGTTSSPKGVVHCHRGIFIVTVDSLIDWCVPKQPVYLWTLPMF 232
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPI 286
H NGWSF WG A VG TNVCLRKFDA ++ IR H VTHMCGAP+
Sbjct: 233 HANGWSFPWGMAAVGGTNVCLRKFDASVIYEAIRVHRVTHMCGAPV 278
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 145/210 (69%), Positives = 173/210 (82%), Gaps = 4/210 (1%)
Query: 349 KWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYL 408
KWN+LPA ERA LK+RQGVRT+G+TEVD++DP +GLSVKRDG + GEIV+RGG +MLGYL
Sbjct: 280 KWNRLPATERARLKSRQGVRTVGMTEVDVLDPGSGLSVKRDGSSLGEIVLRGGCIMLGYL 339
Query: 409 KDPEATSKCM-KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHP 467
KDP+ TSK + DG ++TGDVG+MH DGYLEIKDRSKDVIISGGEN+SS E+ESVLY+HP
Sbjct: 340 KDPKGTSKSLTDDGWFFTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYTHP 399
Query: 468 MVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVF 527
VNEAAVV RPD FW E PCAFVSLK TEK+I++YCRAR+P YMVPKTVVF
Sbjct: 400 AVNEAAVVARPDDFWGETPCAFVSLKPERTE---QPTEKEIMEYCRARMPHYMVPKTVVF 456
Query: 528 IDELPKTATGKVQKYVLGDIANSMSMSHSR 557
+ELPKT+TGK+QK+VL + A +M S R
Sbjct: 457 EEELPKTSTGKIQKFVLRETAKAMGSSRVR 486
>gi|386855457|ref|YP_006259634.1| Fatty-acid--CoA ligase [Deinococcus gobiensis I-0]
gi|379998986|gb|AFD24176.1| Fatty-acid--CoA ligase, putative [Deinococcus gobiensis I-0]
Length = 521
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 203/534 (38%), Positives = 291/534 (54%), Gaps = 29/534 (5%)
Query: 12 CPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
PLTPL + R D ++I +T+ + R +LA +++ G G V V+
Sbjct: 3 TPLTPLDLVRRGLKVYPDRVAVIQPGGRQFTYREWGGRIYRLARAVAEAGY-AGAQVGVL 61
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVS 130
+PN + VP +GA+ +NTRL A + L+H+E +L+ VD + +V
Sbjct: 62 SPNTHGGLLAYAGVPWAGAVLVPLNTRLSAEEYAFQLRHAEVRLLLVDESLEPRVRDVAR 121
Query: 131 LFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLD 190
V + + E ++ +E LA D + D
Sbjct: 122 DLGTE------VWVLGEGEAGAA---------------FEARLAAQDASPLPYAVADEDD 160
Query: 191 PMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
+ +N+T GTTS+PKGV+ ++ + A +++ + + SV L TLP FH NGW W
Sbjct: 161 TLTINFTSGTTSSPKGVMLTHRNSLLNATETIYSFKFDQDSVYLHTLPDFHANGWGGVWS 220
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAG 310
VG T+V L A +A I ++GVTH+C AP VL++L+ A+ L RPVR++TAG
Sbjct: 221 GFGVGVTHVTLPAVRAAEAYAAIEQYGVTHLCAAPTVLSMLTDPATARPLSRPVRVVTAG 280
Query: 311 SPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTI 370
SPP A + +LGF V+ YG TE + + LP ERA L ARQG +
Sbjct: 281 SPPHARTIADMNALGFHVTQAYGLTETSPLITVAELSAAQEALPTAERAPLVARQGFEML 340
Query: 371 GLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGM 430
EV+++ + V DGQT GEI++RG +M GY ++PEAT + + G ++TGDV +
Sbjct: 341 LAGEVEVLAEDLS-PVPHDGQTLGEIMVRGNLVMKGYFRNPEATERALAGGWFHTGDVAV 399
Query: 431 MHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFV 490
HPDG +EI+DR+KDVIISGGENISS EIE VLY+HP V EA VV PDP W E+PCAFV
Sbjct: 400 THPDGRIEIRDRNKDVIISGGENISSVEIEGVLYAHPAVREAVVVAMPDPRWGEVPCAFV 459
Query: 491 SLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
+L GG + +D+ + R R+ + VPK F D+LPKTA+GK QK+VL
Sbjct: 460 ALH-----GGHAASPEDLTAHVRTRLAGFKVPKHYEFRDDLPKTASGKFQKFVL 508
>gi|260579717|ref|ZP_05847576.1| AMP-binding enzyme family protein [Corynebacterium jeikeium ATCC
43734]
gi|258602147|gb|EEW15465.1| AMP-binding enzyme family protein [Corynebacterium jeikeium ATCC
43734]
Length = 557
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 198/545 (36%), Positives = 298/545 (54%), Gaps = 13/545 (2%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
+ PLTPL F++R+A + + + T+++ A +L + + G V ++
Sbjct: 10 NAPLTPLRFLQRSAQVHPNKIAAVDGPRRITFAEFNEDAQAFAHALIADHVAEGDRVGIL 69
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVS 130
A N FAVP++ A+ INTRL + ++ IL HS ++ + L++ +
Sbjct: 70 AANSYEALLAQFAVPLANAVTVPINTRLAPKEVNYILDHSSINVL----VGEKELIDPI- 124
Query: 131 LFPPHSKTPKLVLITDDKEIS-SSSSPPPRIPPADFVDTYENMLA-KGDPQFSWVRPKSD 188
L + V I D + + A V T+ + LA D + R +
Sbjct: 125 LASGERNLRRAVYIADKEGVEPQVEKGETDAQGASLVTTFSDYLAGHRDEEPLPYRVHDE 184
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
+ + +NYT GTT PKGV+ ++ ++ A+ +V LWTLPMFH +GW
Sbjct: 185 NETIAINYTSGTTGKPKGVIYTHRGAYLNALGQAHTQHFSHDTVYLWTLPMFHCSGWCTG 244
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILT 308
W A V AT V LR P ++ LIR GVT MCGAP VLN L E K+ +R+ T
Sbjct: 245 WAAMAVSATQVALRAVRGPEMWELIRTEGVTAMCGAPAVLNTLVDD-ENKRRVTNLRVTT 303
Query: 309 AGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVR 368
AG+PP + R E++G V+H YG TE G C +P+W + R RA LKARQGV
Sbjct: 304 AGAPPSPTTITRCENIGVEVTHVYGLTESYGPFTVCEAQPEWADMTVRRRAVLKARQGVA 363
Query: 369 TIGLTEVDIVDP-----ETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
++ +V +++P E + V DG T GEI++ G +M GY KD EAT+ + G +
Sbjct: 364 SVTNEDVRVIEPTEHLDEALVDVPADGATLGEIILTGNGIMAGYFKDEEATAHAFRGGWF 423
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
+TGD+G+MHP+GY+++ DR+KDV++SGGENIS+ E+E + SHP +++ AV+G PD W
Sbjct: 424 HTGDLGVMHPNGYIQLMDRAKDVVVSGGENISTIEVEQAVISHPDISDCAVIGVPDEKWG 483
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E P A+V+L+ G E+ +I YCRA I Y VP+ V ++ELP+T+TGKV+K
Sbjct: 484 ERPRAYVTLRPEARGGDESALEEAVIAYCRAHIAGYKVPRDVRILEELPRTSTGKVRKNE 543
Query: 544 LGDIA 548
L + A
Sbjct: 544 LREEA 548
>gi|37527022|ref|NP_930366.1| hypothetical protein plu3135 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36786455|emb|CAE15509.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 536
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 201/537 (37%), Positives = 302/537 (56%), Gaps = 27/537 (5%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
+ L+P+ F+ RA + D ++I + +TWSQ RC +LA +L G+ VVS
Sbjct: 12 DGVALSPISFLRRAILSNGDDIAVIDGECHWTWSQYASRCERLAIALKKMGVCKETVVSA 71
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+ PNI + ELHFAVPM+G I N ++TR D+ T++ I K K++F+D SLL + V
Sbjct: 72 LLPNIHELLELHFAVPMAGGILNALSTRTDSNTLNFIFKKLNPKVLFIDRTFISLL-DDV 130
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLA---KGDPQFSWVRPK 186
SL K K+++I D + S S I +F+ YE+++ G+ FS +
Sbjct: 131 SL----DKQVKIIVIDVDGAVISES-----ISDREFIQ-YESLITTHKSGELSFSL---R 177
Query: 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
+ + + +N T GT+ PK +V ++ F+ ++ +++DW +PK+ LWTLPMFH NGW
Sbjct: 178 DEQEAISINVTSGTSGQPKLIVYSHRGVFLNSISNVLDWDIPKRPTFLWTLPMFHCNGWC 237
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRI 306
F W G T++C+RKFDA L++KH VTH CGAPIV L + + L +I
Sbjct: 238 FPWAITARGGTHICMRKFDAEEAILLMQKHKVTHYCGAPIVHCALGTIARKQGLHFKEKI 297
Query: 307 --LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
L AG+PP + +S+G V+ YG TE G V C K W KL R S + R
Sbjct: 298 HGLVAGAPPTEMMFSLLDSIGIAVTQVYGMTETYGPVVVCEEKSDWEKLSKSVRISKRMR 357
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYY 424
QG+ + +V +++ TGL V DG+T GE+V+R G+++ Y D T +
Sbjct: 358 QGIVSNLQGQVCVIEENTGLQVPFDGKTVGELVIR-GNMVASYDPDRHVTLDAASQW-LF 415
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
TGD+ ++ DGY+ I DR +D+IISGGENISS E+E++L ++P V AAVV +PD W E
Sbjct: 416 TGDLAVVENDGYVRIVDRKRDIIISGGENISSLELENILSNYPGVLAAAVVAKPDSHWGE 475
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
+P AF+ L+ + TE ++ Y + RY PK F+ LP+ A+GK+ K
Sbjct: 476 VPYAFIELEETSS-----VTEYELDNYICTVMARYKRPKGYTFL-TLPRNASGKIIK 526
>gi|357020795|ref|ZP_09083026.1| AMP-dependent synthetase and ligase [Mycobacterium
thermoresistibile ATCC 19527]
gi|356478543|gb|EHI11680.1| AMP-dependent synthetase and ligase [Mycobacterium
thermoresistibile ATCC 19527]
Length = 520
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 205/551 (37%), Positives = 295/551 (53%), Gaps = 47/551 (8%)
Query: 8 PANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVV 67
P + LTP F+ R+AT D ++I ++ Y R ++A L G+ G V
Sbjct: 10 PPCATALTPTDFLRRSATIFPDRVAVIDGADRTSYIGWYHRVRRMAGLLRKCGVQQGDCV 69
Query: 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD----HLSSS 123
+V+APN + + H+ VPM+GA+ T+N RL ++ I +H+ +K V D H+++
Sbjct: 70 AVLAPNTSMLLDAHYGVPMAGAVLLTLNIRLTVEDLTYISRHAGAKAVLFDDSLAHIAAQ 129
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L + + S T + D E+ VD
Sbjct: 130 LPIPIQL-----SATEYRRRVADAPEVEHQ------------VD---------------- 156
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
+L + LNYT GTT P+GV+ ++ ++ A+ + + Q+V LWTLPMFH +
Sbjct: 157 ---DELALLSLNYTSGTTGRPRGVMYHHRGAYLQALATAYHSGLSPQTVHLWTLPMFHCH 213
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GWSFTW G T+VCL K + ++ + GV + AP VL L+S +A+++
Sbjct: 214 GWSFTWSVTAAGGTHVCLPKVEPSAIWRHLHDDGVNSLNAAPTVLIDLASHHDARRVAHG 273
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
VR+ T G+PP +L R LGF ++H YG TE G V C + + P E+A KA
Sbjct: 274 VRVGTGGAPPSPTLLQRLSELGFDITHYYGLTETYGPAVICEFPAERADSPMIEQARFKA 333
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQG I + +VD + G V D T GEIV+RG ++ GY +D EAT + G +
Sbjct: 334 RQGNCNIVGQPLRVVD-DRGDDVPADATTMGEIVIRGNTVATGYYRDEEATREAFGSGWF 392
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
TGD+G+MHPD Y+E++DR+KDVIISGGENISS E+E VL +HP V E AVV P P W
Sbjct: 393 RTGDLGVMHPDNYVELRDRAKDVIISGGENISSVEVEQVLDTHPAVRECAVVAGPHPRWG 452
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E+P AFV L+ G ++ T +D+I Y R R+P + PKT V+I LPKT TGK+QK+
Sbjct: 453 EVPVAFVDLEPGANA-----TVEDLIAYARTRLPGFKTPKT-VYIGPLPKTGTGKIQKFR 506
Query: 544 LGDIANSMSMS 554
L D A S
Sbjct: 507 LRDRARHGKYS 517
>gi|302526619|ref|ZP_07278961.1| O-succinylbenzoate-CoA ligase [Streptomyces sp. AA4]
gi|302435514|gb|EFL07330.1| O-succinylbenzoate-CoA ligase [Streptomyces sp. AA4]
Length = 509
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 199/541 (36%), Positives = 294/541 (54%), Gaps = 36/541 (6%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVV 67
AN PL+PL F+ R D ++ + +W++ R +LA L G+ G V
Sbjct: 4 ANDVPLSPLSFLRRTVDLDGDGIGVVTDTGERMSWARFADRAERLAGRLRELGLGEGDRV 63
Query: 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLE 127
+V+APN + E H+ VP +G +NTRL + +L+ S +K + VD
Sbjct: 64 AVLAPNGVPLLEAHYGVPGAGCALVALNTRLSKDEYAQLLRLSGAKALIVDQ-------S 116
Query: 128 VVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKS 187
+V+ P + + +L+ + YEN L DP P
Sbjct: 117 LVAQVPERTPELRAILVLGED--------------------YENWLRTADP-VPLRLPGD 155
Query: 188 DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSF 247
+ P+ +N+T GTT+ PKGVV ++ ++ A+ ++ + S LWTLPMFH NGW +
Sbjct: 156 ERQPLAVNFTSGTTAGPKGVVYTHRGAYLNALGQVVSTGLQASSRYLWTLPMFHCNGWCY 215
Query: 248 TWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRIL 307
TW GA +V LRK DA F LI + VTH+ GAP+VL+LL + + + V+
Sbjct: 216 TWAVTAAGARHVTLRKMDAVRAFELIEQEAVTHLSGAPVVLDLLVQASGGARFTQRVQFA 275
Query: 308 TAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
G+PP + +G V+H YG TE G ++ C +P+W +L RA + ARQGV
Sbjct: 276 VGGAPPSPAAIAAMSGIGIEVTHLYGMTETYGPSLMCVPRPEWQELDPAGRAKMMARQGV 335
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGD 427
RT+ + +V PE V DG+T GE+++R ++M GYL +PEAT G +TGD
Sbjct: 336 RTVNVESARVVTPEFE-DVPADGETLGELMIRSNTVMAGYLDNPEATEAAFAGGWLHTGD 394
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
V + HPDGY+E++DR KDVIISGGENI+S E+E+ L H V EAAVV + DP W E+P
Sbjct: 395 VAVRHPDGYVEVRDRLKDVIISGGENIASIEVENALLGHEAVAEAAVVAKADPRWGEVPV 454
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDI 547
AFV L+ G + +E D+I++ R R+ + VP+ + F ELPKT+TGK++K L +
Sbjct: 455 AFVRLRDGAE-----VSEADLIEWLRERLAHFKVPRDLRFA-ELPKTSTGKIRKAELRKL 508
Query: 548 A 548
A
Sbjct: 509 A 509
>gi|172040420|ref|YP_001800134.1| acyl-CoA synthetase [Corynebacterium urealyticum DSM 7109]
gi|171851724|emb|CAQ04700.1| acyl-CoA synthetase [Corynebacterium urealyticum DSM 7109]
Length = 546
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 204/543 (37%), Positives = 298/543 (54%), Gaps = 22/543 (4%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
+ PLTPL F+ER+A + + I ++ Q A +L + G+ V V+
Sbjct: 12 NVPLTPLRFLERSANIFPEATACIDGVRRISFKQFREDAEAFARALRANGLARHDRVGVL 71
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVS 130
APN FAVP++G + INTRL A ++ I H+ ++ ++ LL VV
Sbjct: 72 APNSYEALLAQFAVPLAGGVTVPINTRLAAAEVAYIQGHAGFHVLIG---AADLLAGVVE 128
Query: 131 LFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLD 190
P +L+ I + S P ADF+ ++ + S+ R D +
Sbjct: 129 ELP---NGLRLLEIPELDGTQPGSFPSF----ADFIASH-----REGEGLSY-RVADDNE 175
Query: 191 PMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
P+ +NYT GTT PKG V ++ ++ A+ + SV LWTLPMFH +GW W
Sbjct: 176 PIAINYTSGTTGRPKGAVYTHRGAYLNAIGEVNAQKFASDSVYLWTLPMFHCSGWCTGWA 235
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAG 310
A V AT V LR P ++ LI + G+THMCGAP VL L E K+ + +RI+TAG
Sbjct: 236 AMAVSATQVTLRAVRGPEMWRLIAEEGITHMCGAPAVLTTLVDD-ENKRRVKNLRIVTAG 294
Query: 311 SPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTI 370
+PP ++ R E+LG V+H YG TE G C + +W+ + R RA LKARQGV I
Sbjct: 295 APPSPTIITRCENLGIEVTHVYGLTESYGPFTVCEPQREWSDMTVRRRAVLKARQGVALI 354
Query: 371 GLTEVDIVDP-----ETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYT 425
EV +++ ++ + V DG T GEIVM G +M GY +D EAT + G ++T
Sbjct: 355 TNEEVLVIEQTDENDDSIVEVPSDGATMGEIVMTGNGVMAGYFEDEEATRIAFRGGYFHT 414
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+G+ HPDGY+++ DR+KDV++SGGENIS+ E+E + S+P V++ AV+G PD W E
Sbjct: 415 GDLGVKHPDGYIQLLDRAKDVVVSGGENISTIEVEQAIVSYPDVSDCAVIGVPDEKWGER 474
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLG 545
P A+V L++ + II +CR + Y VP+ +V +DELP+T+TGKV+K L
Sbjct: 475 PRAYVVLRSEARGDDPEAISEAIIAHCRVNMAGYKVPRDIVILDELPRTSTGKVRKKELR 534
Query: 546 DIA 548
D A
Sbjct: 535 DEA 537
>gi|410453135|ref|ZP_11307096.1| AMP-binding enzyme [Bacillus bataviensis LMG 21833]
gi|409933642|gb|EKN70564.1| AMP-binding enzyme [Bacillus bataviensis LMG 21833]
Length = 530
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 199/542 (36%), Positives = 302/542 (55%), Gaps = 29/542 (5%)
Query: 12 CPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PLTPL + RA + ++I + +T+ + R L+++L GI G V+V+
Sbjct: 3 APLTPLDWKRRAIKYYPEKTAVIDGEKEFTYQEFGTRVDLLSAALHQAGIGTGDHVAVML 62
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN M E + + GA+ +N RL A+ + I++HS++K++ VD S+ + +++
Sbjct: 63 PNTHYMLECFYGICQLGAVMVPLNYRLAAKDLEYIIRHSDAKMLIVDEEFSAPIEKIIEK 122
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
L LI + +S + D YE L + PQ + + P+ ++D
Sbjct: 123 L-------SLELIINVHVAGYETS----LKGVD----YEEFL-RHAPQNAEL-PEVEIDE 165
Query: 192 ---MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
+ LNYT GTTS PKGV+ ++ ++ A + L V V L TLPMFH NGW
Sbjct: 166 NQLLTLNYTSGTTSKPKGVMLTHRGNYLNAANFLYHLNVKPDDVYLHTLPMFHANGWGGV 225
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD---RPVR 305
W G T+VCLRK D P + L + ++ +CGAP V+N+L + P+AK++ P
Sbjct: 226 WAITAAGGTHVCLRKVDPPLILELFEQKNISLLCGAPTVVNMLVNDPKAKEVKIKTSPRM 285
Query: 306 ILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
P A + E LG + H YG TE + + C WK +++ A E+A++KARQ
Sbjct: 286 ATAGAPPAAALIHKAQEILGLNMVHVYGLTETSPFILYCEWKKEFDLKSADEQATIKARQ 345
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYT 425
G+ E +V + G V +G+ GEI+ RG +M GY KDP+ T+ ++DG ++T
Sbjct: 346 GIELAFNGETKVVH-QDGAEVAWNGRELGEIITRGNVVMAGYYKDPQTTAAAIRDGWFHT 404
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+ + +PDG++EI+DR+KD+IISGGENISSTE+E VLY HP V E AV+ PD W E+
Sbjct: 405 GDLAVTYPDGFIEIQDRAKDLIISGGENISSTEVEGVLYKHPAVLETAVIAIPDEKWGEV 464
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLG 545
P A + L+ + TE +IIQ+CR + + PK V F+D LPKTATGK+QKY L
Sbjct: 465 PKAIIVLQQNA-----IVTEVEIIQFCRENMAHFKAPKAVEFVDALPKTATGKLQKYRLR 519
Query: 546 DI 547
++
Sbjct: 520 EM 521
>gi|443672304|ref|ZP_21137393.1| Tyrocidine synthase 3 [Rhodococcus sp. AW25M09]
gi|443415167|emb|CCQ15731.1| Tyrocidine synthase 3 [Rhodococcus sp. AW25M09]
Length = 531
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 206/545 (37%), Positives = 296/545 (54%), Gaps = 38/545 (6%)
Query: 14 LTPLGFIERAA------TACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVV 67
+TPL F+ERAA TA +D P T+T+ Q +LA++L + G+ G V
Sbjct: 1 MTPLRFLERAAEVHPHKTAVEDGPR------TFTYEQFAAAVTRLANALRASGVGHGDRV 54
Query: 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLE 127
+ IA N + H+AVP++GA+ INTRL + I HS S L+ D S LL
Sbjct: 55 AYIASNSAELLFAHYAVPLAGAVLVAINTRLSPAEVRYICDHSGSVLLVGD----SALLA 110
Query: 128 VVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG-DPQFSWVRPK 186
+ P ++V E S ++P Y+ L +G D W
Sbjct: 111 GLGTDPIADSVAEIV------ETPSVDGTYGKLP---HTTRYDAFLERGTDDPMVW-EVD 160
Query: 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
+ + +NYT GTT PKGV+ ++ ++ ++ L + LWTLPMFH NGW
Sbjct: 161 DETSTITINYTSGTTGRPKGVMYTHRGAYLNSLGELHHQGFGIDTRYLWTLPMFHCNGWC 220
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRI 306
TW T+VCLR ++ I +GV H+ GAP VL L+++ EA LDRP+ I
Sbjct: 221 TTWAVTAASGTHVCLRGVRGDAIWTAI-DNGVDHLAGAPTVLTTLATAAEAHSLDRPLTI 279
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
+TAG+PP ++ + +LG + H YG TE G C K +W +L A E+A ARQG
Sbjct: 280 VTAGAPPSPTIITKIRALGATLVHVYGLTETYGPYSVCEAKQEWLELDADEQARRLARQG 339
Query: 367 VRTIGLTEVDIV--DPETG---LSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
V + + +V P+TG + V+ DG GEIVMRG ++M GY D T+K G
Sbjct: 340 VGMLTADRLRVVRDKPDTGGALIDVEPDGVEMGEIVMRGNNVMKGYYNDASGTTKAFAGG 399
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+++GD+G+MHPDGY+++ DR+KDV+ISGGENIS+ E+E L SHP V + AV+G PD
Sbjct: 400 WFHSGDLGVMHPDGYVQLLDRAKDVVISGGENISTIEVEQALASHPAVADVAVIGVPDDK 459
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P A+V L G + +E D++ + ++ I Y P+ V FI ELPKT+TGK++K
Sbjct: 460 WGERPKAYVVLVPGAQA-----SEADLLAHVKSAIASYKAPRAVEFIVELPKTSTGKIRK 514
Query: 542 YVLGD 546
L D
Sbjct: 515 KELRD 519
>gi|319949300|ref|ZP_08023378.1| acyl-CoA synthetase [Dietzia cinnamea P4]
gi|319437038|gb|EFV92080.1| acyl-CoA synthetase [Dietzia cinnamea P4]
Length = 543
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 203/551 (36%), Positives = 295/551 (53%), Gaps = 23/551 (4%)
Query: 4 LKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINP 63
+ N LTPL F+E+AA D +++ T+++ R +LAS L G+
Sbjct: 1 MTANSGLDTALTPLSFLEKAARVSPDATAVVDGPRRQTYAEFADRATRLASLLKMRGVAR 60
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V V+APN FAVP++G +NTRL I+ I+ H+ +++ D +
Sbjct: 61 GDRVGVLAPNSAEALLAQFAVPLAGGAVVALNTRLAPAEIAYIVDHAGIEVLIAD---AD 117
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ-FSW 182
LL + P +L+L+ D + + + R P + E LA PQ W
Sbjct: 118 LLAGLGDEVP---DALRLLLVAPDADGTQPDAS--RFGPR--AEALEEGLANASPQPVPW 170
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
D + +NYT GTT PKGV+ ++ ++ A+ +I + S LWTLPMFH
Sbjct: 171 TVADED-SVIAVNYTSGTTGRPKGVMYTHRGAYLNALGEIITQDLDADSRYLWTLPMFHC 229
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
NGW TW T+VCLR ++ L G+ + GAP VL+ ++ P A+ ++
Sbjct: 230 NGWCTTWALTGARGTHVCLRAVRGEDIWRLFDDEGINRLAGAPAVLSTIADDPAARPIE- 288
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
+R++TAG+PP +L R E LG V+ YG TE G C +P W L ERA LK
Sbjct: 289 GIRMITAGAPPSPTILRRFEELGIDVTQVYGLTETYGPFTVCTPQPGWADLDPDERAGLK 348
Query: 363 ARQGVRTIGLTEVDIVD----PETGL-SVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
+RQGV I V +V+ ET L V DG T GE+VM G +M GY DPEAT+
Sbjct: 349 SRQGVAMIHADTVRVVERTSPGETRLIDVPADGVTMGEVVMTGNGVMKGYFNDPEATAAA 408
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G +++GD+G+MHPDGY+++ DR+KDV++SGGENIS+ E+E + SHP V + AVV
Sbjct: 409 FAGGWFHSGDLGVMHPDGYVQLLDRAKDVVVSGGENISTIEVEQAIVSHPDVVDCAVVSM 468
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD W E P A+V ++ G+ E ++++CR +I RY VP V + LP+T+TG
Sbjct: 469 PDEKWGERPKAYVVVRPGS-----QLDEAGVVEHCRTKIARYKVPGAVELTEALPRTSTG 523
Query: 538 KVQKYVLGDIA 548
KV+K L D A
Sbjct: 524 KVRKNELRDAA 534
>gi|111026986|ref|YP_708964.1| AMP-binding acyl-CoA synthetase [Rhodococcus jostii RHA1]
gi|110825525|gb|ABH00806.1| probable AMP-binding acyl-CoA synthetase [Rhodococcus jostii RHA1]
Length = 518
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 201/541 (37%), Positives = 293/541 (54%), Gaps = 41/541 (7%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
+N LTP +++RAA +II D T+T+ + R +L L++ GI G V+
Sbjct: 4 SNFAVLTPTQYLDRAAVTVAHRNAIIDGDLTFTYREFAERSNRLTGVLAARGIGVGDRVA 63
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
V+ N M ELH AVP+ GA+ +N RL + IL+HS + L+ H
Sbjct: 64 VLCTNSHIMLELHNAVPLRGAVLVPLNIRLSEPELDYILEHSGATLLVATH--------- 114
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIP--PADFVDT-YENMLAKGDPQFSWVRP 185
+ +I+ S + IP AD D+ YE L +P + V
Sbjct: 115 -----------------EFADIAGSLAARRNIPLLQADGSDSAYETELVSAEP--ARVES 155
Query: 186 KSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGW 245
D + +NYT GTT PKGV+ ++ ++ A+ + S LWTLPMFH NGW
Sbjct: 156 DDDRTLLAINYTSGTTGRPKGVMYHHRGAYLQALAMTYHMGLGPGSRYLWTLPMFHCNGW 215
Query: 246 SFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDRP 303
F W G T+VCLR D ++ IR+ G TH AP VL++++ A P
Sbjct: 216 CFPWAVTAAGGTHVCLRAVDPSEIWRHIRE-GATHFSAAPTVLSMIAEHAAAADGPTANP 274
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
V++ T G+PP +L R L ++H YG TE G + W+P+W+ L + A +A
Sbjct: 275 VKVSTGGAPPSPTLLRRMVKLNMQITHLYGMTETFGPAIINLWQPEWDSLGDQAAAEKQA 334
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRY 423
RQGV + +VD G V+ DGQ GE+++ G ++MLGY +D AT+ DG
Sbjct: 335 RQGVPNVITGGARVVD-SAGKDVEPDGQAIGELIIEGNNIMLGYYRDDAATAAANVDGWL 393
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
TGD+ +MH DGY+EI+DR KDVIISGGENI+S E+E VL SHP V E+AVVG P W
Sbjct: 394 RTGDLAVMHADGYVEIRDRLKDVIISGGENIASVEVERVLDSHPAVVESAVVGIPHDRWG 453
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E+P AFV+++ GT+ E++++++ R + R+ VPK ++F + LP+T+TGK+QK V
Sbjct: 454 EVPIAFVTVRPGTE-----VHEEELVEFARQHLARFKVPKKIIFAN-LPRTSTGKIQKNV 507
Query: 544 L 544
L
Sbjct: 508 L 508
>gi|213965187|ref|ZP_03393385.1| acyl-CoA synthetase [Corynebacterium amycolatum SK46]
gi|213952301|gb|EEB63685.1| acyl-CoA synthetase [Corynebacterium amycolatum SK46]
Length = 600
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 206/559 (36%), Positives = 300/559 (53%), Gaps = 31/559 (5%)
Query: 13 PLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAP 72
P+TPL F+ER+A + + T+++ A +L G+ V V+A
Sbjct: 40 PITPLRFLERSARVHPNKVGFVDGPRRITFAEMAADAQAFAHALIDDGLQKNDRVGVLAA 99
Query: 73 NIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSE-SKLVFVDHLSSSLLLEVVSL 131
N FA+P++G + INTRL A+ I IL+HSE + L+ L L V L
Sbjct: 100 NSYEALLAQFAIPLAGGVVVAINTRLAAKEIEYILEHSEITTLLGEQTLIDQALPTVGHL 159
Query: 132 FPPHSKTPKLVLITDDK----EISSSSSPPPRIPPADFVDTY---ENMLAKGD--PQFSW 182
+++ I D + EI+ +S+ A Y ++++ +G P +
Sbjct: 160 LE------QVIYIADGEGNEPEIADTSAYQAENTAAATFSQYLAGDDVVKRGKNRPNLPY 213
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
+ DP+ +NYT GTT PKGVV ++ ++ A+ + +V LWTLPMFH
Sbjct: 214 -SVDDEHDPIAINYTSGTTGKPKGVVYTHRGAYLNALGQVQTMHFNHYTVYLWTLPMFHC 272
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
+GW W A A V +R P ++ LI + GVT MCGAP VL L +++
Sbjct: 273 SGWCTGWAAMSTSARQVAIRAVRGPEMWRLIVEEGVTSMCGAPAVLTTLVDDDNKRRVTN 332
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
+RI+TAG+PP ++ R E++G ++H YG TE G C +P W + R RA LK
Sbjct: 333 -LRIMTAGAPPSPTIITRCENIGVEITHVYGLTESYGPFTVCESQPDWKDMTVRRRAVLK 391
Query: 363 ARQGVRTIGLTEVDIVDPETGLS-----VKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
ARQGV T+ +V IV+ L V DG T GEI+M G +M GY KDPEAT
Sbjct: 392 ARQGVATVTNQDVRIVEQSDALDAPLIDVPNDGATIGEIIMTGNGVMNGYFKDPEATEHA 451
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
+ G ++TGD+G+MHPDGY+++ DR+KDVI+SGGENIS+ E+E + S+P V++ AV+G
Sbjct: 452 FRGGWFHTGDLGVMHPDGYIQLLDRAKDVIVSGGENISTIEVEQAVVSYPDVSDCAVIGV 511
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKD--------IIQYCRARIPRYMVPKTVVFID 529
PD W E P A+V L+ G + +I +CRA I Y +P+ VV ID
Sbjct: 512 PDDKWGERPRAYVVLRPEARCQGTAEEVAEHNKNVAEVVIAHCRAHIAGYKIPRDVVVID 571
Query: 530 ELPKTATGKVQKYVLGDIA 548
ELP+T+TGKV+K L D+A
Sbjct: 572 ELPRTSTGKVRKNELRDLA 590
>gi|340793663|ref|YP_004759126.1| acyl-CoA synthetase [Corynebacterium variabile DSM 44702]
gi|340533573|gb|AEK36053.1| acyl-CoA synthetase [Corynebacterium variabile DSM 44702]
Length = 566
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 208/560 (37%), Positives = 295/560 (52%), Gaps = 40/560 (7%)
Query: 14 LTPLGFIERAA------TACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVV 67
LTPL F++R+A TAC D P I T++ + +A +L G+ G V
Sbjct: 9 LTPLRFLDRSAQVHPGKTACIDGPRRI------TFATMRADAVLMARALRRRGVREGDRV 62
Query: 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLE 127
++A N FAVP++G + INTRL + I HS+ ++F + L+L
Sbjct: 63 GMLASNSYEALLAQFAVPLAGGVLVAINTRLAPAEVRYICDHSDIHILFGEQ---DLILN 119
Query: 128 VVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG---------DP 178
VLI + + S P P+ P A V T++ L +G D
Sbjct: 120 SRRTLGSAGLVDTFVLIHN----ADGSQPQPKHPDAGTVTTWDEFLDEGVHHEEDADDDT 175
Query: 179 QFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
F + D + +NYT GTT PKGVV ++ ++ A+ + + +V LWTLP
Sbjct: 176 TFPFTVDDEDA-AIAINYTSGTTGRPKGVVYTHRGAYLNALGEVTTQDFTRDTVYLWTLP 234
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK 298
MFH +GW W A V AT V LR P ++ LI GV+ MCGAP VL+ L + A
Sbjct: 235 MFHCSGWCTGWAAMAVSATQVALRAVRGPEMWDLIDTEGVSAMCGAPAVLSTLVGADAAH 294
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
Q + + ++TAG+PP V+ E+LG +V+H YG TE G C +P W LP R
Sbjct: 295 QAE-GLSVVTAGAPPSPTVIEACENLGIVVTHVYGLTESYGPYTVCEPQPDWTDLPVAGR 353
Query: 359 ASLKARQGVRTIGLTEVDIVDPETG--------LSVKRDGQTRGEIVMRGGSLMLGYLKD 410
A LKARQGV I + +V+ + V DG T GEIV+ G +M Y +
Sbjct: 354 AKLKARQGVPMITNADARVVEAVPAGAPADTILIDVPADGVTMGEIVLGGNGVMKEYFHN 413
Query: 411 PEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVN 470
P+AT++ G +++GD+ + HPDGY++I DR+KDV+ISGGENIS+ E+E + SHP V+
Sbjct: 414 PDATAEAFVGGWFHSGDLAVKHPDGYIQILDRAKDVVISGGENISTIEVEQAVISHPAVD 473
Query: 471 EAAVVGRPDPFWQEIPCAFVSLKTGTDSGG--MMTTEKDIIQYCRARIPRYMVPKTVVFI 528
+ AV+G PD W E A+V L GTD G E+ +I +CR +I Y VP+ I
Sbjct: 474 DVAVIGVPDEKWGERLRAYVVLTPGTDISGDAAAKVEQSVIDHCRGQIAGYKVPRDYRVI 533
Query: 529 DELPKTATGKVQKYVLGDIA 548
DELP+T+TGKV+K L D A
Sbjct: 534 DELPRTSTGKVRKNALRDDA 553
>gi|392567139|gb|EIW60314.1| acetyl-CoA synthetase-like protein [Trametes versicolor FP-101664
SS1]
Length = 586
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 208/569 (36%), Positives = 298/569 (52%), Gaps = 53/569 (9%)
Query: 3 RLKPN-PANSCPLTPLGFIERAATACDDCPSIIYNDTT----YTWSQTYRRCLQLASSLS 57
RL N P + L PL F+ R+A + ++++ D Y++ +RC A +L
Sbjct: 37 RLPSNVPVHLHALNPLAFLLRSAQVYPNKLALVHPDVEHPVIYSYGVWAQRCQNFAYALI 96
Query: 58 SFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFV 117
GI+PG +++IAPNIP++ E + V + A+ INTRL + IL+HS S+L+ V
Sbjct: 97 QAGIHPGDRIAIIAPNIPSVSEAYHGVLGARAVICPINTRLTPGEVDYILEHSGSRLILV 156
Query: 118 DHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLA--- 174
DH + L+ +K P +V+ +E D YE L+
Sbjct: 157 DHEYTPLV--------KGAKVPVVVINDTGRED----------------DPYEQFLSAGR 192
Query: 175 -----KGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPK 229
+G P W R + L YT GTT PKGV+ + ++ A+ + + +
Sbjct: 193 KFSGERGWPGLEWERDEDS--ACALCYTSGTTGRPKGVITTLRGSYLAAMANAYETGMTH 250
Query: 230 QSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN 289
+S LW LPMFH +GW+F W A + LR P ++ + K GVTH CGAP V
Sbjct: 251 ESTYLWILPMFHASGWTFPWTITFAAAAQITLRSVSYPLIWNHLLKSGVTHYCGAPTVQI 310
Query: 290 LLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIA---GVNVSCAW 346
L ++P+A++LD+PV + AGS P A ++ E + H YG TE++ G + C +
Sbjct: 311 GLINAPQARRLDKPVYAVIAGSAPTAHLIGELEKINIKPVHVYGLTEVSNTYGPSTKCYY 370
Query: 347 KPKWNKLPARERASLKARQGVRTIGLTEVDIV-DPETGLS-------VKRDGQTRGEIVM 398
+P W L ERA L ARQG + +V E G S V +DG+T GE+V
Sbjct: 371 QPHWTSLSLEERAKLLARQGHSFATAMDARVVFQLEDGESADAPLRDVPKDGKTMGEVVF 430
Query: 399 RGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTE 458
RG +M Y DPEAT K + G + TGD+ + HPDGY+ ++DRSKD+IISGGEN SS
Sbjct: 431 RGNIVMKEYFNDPEATRKAFRGGYFNTGDLAVWHPDGYIAVQDRSKDIIISGGENASSLA 490
Query: 459 IESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSL---KTGTDSGGMMTTEKDIIQYCRAR 515
IE L SHP V E +VV R P W E P AFV L K G E+D+ ++ R+R
Sbjct: 491 IEQELASHPDVLEVSVVARAHPKWGERPMAFVILHPQKAAKWKGRHAEFEQDLKKHARSR 550
Query: 516 IPRYMVPKTVVFIDELPKTATGKVQKYVL 544
+P + P+ V +DELPKT+TGK+QK L
Sbjct: 551 LPGFACPEWVSVVDELPKTSTGKIQKVQL 579
>gi|441507103|ref|ZP_20989029.1| putative fatty-acid--CoA ligase [Gordonia aichiensis NBRC 108223]
gi|441448179|dbj|GAC46990.1| putative fatty-acid--CoA ligase [Gordonia aichiensis NBRC 108223]
Length = 562
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 202/553 (36%), Positives = 294/553 (53%), Gaps = 28/553 (5%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGIN 62
R+ AN +TPL F++R+ ++ Y + T+++ +LA L+S I
Sbjct: 21 RIDCGTANRSEMTPLRFLQRSVEVFGQRTAVRYGARSMTYAELGDEVQRLARVLTST-IA 79
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
PG ++ +APN+P + HFAVP++G + +N+RL + IL H+ +F D +
Sbjct: 80 PGERIAYLAPNVPELLVAHFAVPLAGGVLVALNSRLAGPELVYILNHAGVTTLFFD---A 136
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD---TYENMLAKGD-- 177
V S+ + V ITD + P P A + +Y LA D
Sbjct: 137 EFRHTVASIADEVPEVATYVEITD-----AEFGPLPGDVDASGIGGLRSYAEFLAGADHL 191
Query: 178 --PQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLW 235
W D + LNYT GTT PKGV+ ++ ++ A+ + + LW
Sbjct: 192 DPTPLPWTVDDED-RVISLNYTSGTTGKPKGVMYTHRGAYLNALGEMHHNQFTGSTRYLW 250
Query: 236 TLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP 295
TLPMFH NGW W A +VCLR+ A V+ I GVT++CGAP VL ++ SP
Sbjct: 251 TLPMFHCNGWCTPWAVTAASAMHVCLRQVRADAVWDAIDDLGVTNLCGAPTVLITIAGSP 310
Query: 296 EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
A +LD P+RI TAG+PP V+ +L V H YG TE G C ++ W+ L
Sbjct: 311 RAHRLDTPLRITTAGAPPSPTVIAALGALDIAVVHVYGLTESYGPYTICEYQEAWDDLDP 370
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETGL----SVKRDGQTRGEIVMRGGSLMLGYLKDP 411
+RA+ + QGV + +V E G+ V DG T GEIV+RG ++M GY KDP
Sbjct: 371 ADRAAKLSLQGVGMVQAEPARVV--ERGVVPLVDVPADGTTIGEIVLRGNNIMAGYFKDP 428
Query: 412 EATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNE 471
+AT + + G ++TGD+G+MH DGY++++DR+KD+IISGGENIS+ E+E L SH V +
Sbjct: 429 DATREAFEGGWFHTGDLGVMHSDGYIQLRDRAKDIIISGGENISTIEVEQALVSHDAVLD 488
Query: 472 AAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDEL 531
AVVG PD W E A+V LK G + ++I Y R + Y +P+ +VF DEL
Sbjct: 489 VAVVGVPDEKWGERARAYVLLKDGRS-----LSSDELIDYARTLLAGYKIPRDIVFADEL 543
Query: 532 PKTATGKVQKYVL 544
P+T+TGKV K+ L
Sbjct: 544 PRTSTGKVLKFEL 556
>gi|226357306|ref|YP_002787046.1| o-succinylbenzoate--CoA ligase [Deinococcus deserti VCD115]
gi|226319296|gb|ACO47292.1| putative o-succinylbenzoate--CoA ligase; putative [Deinococcus
deserti VCD115]
Length = 522
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 199/534 (37%), Positives = 291/534 (54%), Gaps = 28/534 (5%)
Query: 12 CPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
PLTPL + R + ++I +T+ Q R QLA ++ + G G V+V+
Sbjct: 3 TPLTPLDLVRRGLHVYAERTAVIEPGSVQFTYRQWGERIFQLARAVQAAGYG-GRNVAVL 61
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVS 130
+PN + AVP +G++ +NTRL + L+H+E L+ VD + + +V +
Sbjct: 62 SPNTHGGLLTYSAVPWAGSVLVPLNTRLSPQEYEFQLRHAEVALLLVDETLAERVQDVAA 121
Query: 131 LFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLD 190
V I D ++ + +E L D V + + D
Sbjct: 122 GLGIE------VWIMGDALGAAQA--------------FEARLRAQDSSPLPVPVQDEDD 161
Query: 191 PMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
+ +N+T GTTS+PKGV+ ++ + A ++L + + SV L TLP FH NGW W
Sbjct: 162 TITINFTSGTTSSPKGVMLTHRNTLLNAAETLYYFKLDSDSVYLHTLPDFHANGWGGVWS 221
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAG 310
VGAT+V L A + I ++GVTH+C AP VL++L+ +A+++ R VR+ TAG
Sbjct: 222 PFGVGATHVTLPAVRAEAAYDAIDRYGVTHLCAAPTVLSMLTDPAQARRVSRSVRVATAG 281
Query: 311 SPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTI 370
SPP A + LGF V+ YG TE++ + LP +RA L ARQG +
Sbjct: 282 SPPHARTIADMNDLGFHVTQVYGLTEVSPLITVAELSAAQEALPTAQRAPLIARQGYEML 341
Query: 371 GLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGM 430
EVD++D E V DG GEI++RG +M GY ++PEAT++ +K G ++TGDV +
Sbjct: 342 LAGEVDVLD-EHLQPVPHDGVALGEIMVRGNLVMKGYYRNPEATAEALKGGWFHTGDVAV 400
Query: 431 MHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFV 490
+PDG +EI+DR+KDVIISGGENISS E+E VLY+HP V EA VV P W E+PCAFV
Sbjct: 401 TYPDGRMEIRDRNKDVIISGGENISSVEVEGVLYAHPAVREAVVVAMPHEQWGEVPCAFV 460
Query: 491 SLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
+L G T +D+ + RA + + PK F DELPKTA+GK QK++L
Sbjct: 461 ALHQ-----GQQVTPEDLNAHVRAHLAGFKAPKHYEFRDELPKTASGKFQKFIL 509
>gi|386713314|ref|YP_006179637.1| AMP-binding protein [Halobacillus halophilus DSM 2266]
gi|384072870|emb|CCG44361.1| AMP-binding enzyme [Halobacillus halophilus DSM 2266]
Length = 526
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 213/553 (38%), Positives = 300/553 (54%), Gaps = 35/553 (6%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
PL F++RA D P+II +D T T+ Q R QL+ L G+ G V+ +
Sbjct: 2 QVPLVLTDFLDRAVELYGDKPAIIDDDRTLTYKQLNGRVNQLSRGLGDLGVIKGDKVAYL 61
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVS 130
APN M E + V G + +NTRL IL+HSESK++FVD + L V +
Sbjct: 62 APNTLEMLEGFYGVFQVGGVMTPLNTRLKPADYQFILEHSESKVLFVD---ADLYHLVET 118
Query: 131 LFPPHSKTPKL--VLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
+ P K P+L V++ +E ++S YE LA + +
Sbjct: 119 VLP---KLPQLEHVIVHGGEEEGATS--------------YEPWLASFSDELFDRAKLEE 161
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D L YT GTT PKGV+ ++A ++ A+ ++ V Q LL LPMFH NGW
Sbjct: 162 TDIASLLYTSGTTGNPKGVLLSHRANYLHAMSTMHHLRVSDQDTLLHVLPMFHVNGWGSP 221
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQLDRPVRI 306
+ GAT V LRK D + I+KHGV+ + AP VLN+L + Q+++ VR+
Sbjct: 222 FYYTANGATQVMLRKTDPKLMLEKIKKHGVSVLHMAPTVLNMLMEEYDEVQPQIEQDVRV 281
Query: 307 LTAGS-PPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
+ AGS PPPA V E LG+ YG TEI+ + + + LPA E+ LKA+
Sbjct: 282 VIAGSAPPPAFVRKVEEDLGWKFIQVYGMTEISPLITTSELRSMDLDLPAEEKYRLKAKA 341
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYT 425
G IG ++V +VD E G V DG++ GEI+ R +M GY K+ EAT+ ++DG YT
Sbjct: 342 GYEMIG-SKVRVVD-EFGEEVAHDGKSIGEIITRTNGIMEGYFKNEEATNATIRDGWLYT 399
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+ ++ +EI DR KDVIISGGENISS E+E++LY HP V EAAVV P W E+
Sbjct: 400 GDMAVVDEKHTIEIVDRKKDVIISGGENISSIEVEAILYEHPSVLEAAVVATPHDKWGEV 459
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLG 545
P A V L+ G +E+++I +CR ++ + PK++ FIDELPKTA+GK+QK +
Sbjct: 460 PKAVVVLREGE-----TVSEEELIMFCREKLAHFKAPKSITFIDELPKTASGKIQKVI-- 512
Query: 546 DIANSMSMSHSRM 558
I S HSR+
Sbjct: 513 -IRKSFWEGHSRL 524
>gi|441522619|ref|ZP_21004263.1| putative fatty-acid--CoA ligase [Gordonia sihwensis NBRC 108236]
gi|441457802|dbj|GAC62224.1| putative fatty-acid--CoA ligase [Gordonia sihwensis NBRC 108236]
Length = 542
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 204/551 (37%), Positives = 298/551 (54%), Gaps = 32/551 (5%)
Query: 8 PANS---CPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPG 64
PA S PLTPL F++RA D + + T+ + +LA +L + GI G
Sbjct: 4 PARSGLDSPLTPLRFLDRAVEVHPDKEAAVDGGRRRTYRELAAEATRLAQALRASGIGEG 63
Query: 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V+ +A N M HFAVP++G + +NTRL + I HS ++L+ D +
Sbjct: 64 DRVAYLATNSLEMLAAHFAVPLAGGVLVAVNTRLAPAEVRYICNHSGARLLVGD----AP 119
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG-DPQFSW- 182
LE +L +T + V+ T + + + R Y+ + A+G D W
Sbjct: 120 FLE--ALAGVEFETVREVVETPSVDGEYTGAGDLR---------YDELTARGSDNPIPWE 168
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
V ++ L + +NYT GTT PKGV+ ++ ++ ++ +++ + LWTLPMFH
Sbjct: 169 VDDENSL--ISINYTSGTTGEPKGVMYTHRGAYLASLGNVLTQGFGIDTRYLWTLPMFHC 226
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
NGW W V T+VCLR ++ LI VT M GAP VL L+++ EA ++DR
Sbjct: 227 NGWCGPWSVTAVAGTHVCLRAVRGDDMWRLIDTELVTQMSGAPTVLTTLATAGEAHRMDR 286
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
P+ I TAG+PP ++ +LG + H YG TE G C W+ L E A
Sbjct: 287 PLTIATAGAPPSPTIIRAIRNLGIELVHVYGLTETYGPYSVCEPSASWSSLSGEELAVRM 346
Query: 363 ARQGVRTIGLTEVDIVDPE-----TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
ARQGV I + +V PE T + V+ DG GEIVMRG +M GY +DPE T++
Sbjct: 347 ARQGVGMITADRLRVVLPEPAEDGTLVDVEPDGVMMGEIVMRGNVVMKGYFEDPERTAEA 406
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G +++GD+G+MHPDGY+++ DR+KDVIISGGENIS+ E+E + SHP + + AVVG
Sbjct: 407 FAGGWFHSGDLGVMHPDGYVQLLDRAKDVIISGGENISTIEVEQAVVSHPAIVDVAVVGV 466
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
PD W E P A+ K G TE ++I + ++RI Y P+ V F+D+LPKT+TG
Sbjct: 467 PDDKWGERPKAYAVRKPGE-----QLTEAEVIAHVKSRIAGYKAPREVEFVDDLPKTSTG 521
Query: 538 KVQKYVLGDIA 548
K++K L D A
Sbjct: 522 KIRKNELRDAA 532
>gi|357590802|ref|ZP_09129468.1| acyl-CoA synthetase [Corynebacterium nuruki S6-4]
Length = 586
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 207/561 (36%), Positives = 295/561 (52%), Gaps = 39/561 (6%)
Query: 13 PLTPLGFIERAA------TACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHV 66
PLTPL F+ER+A TAC D P + T++ + +A +L G+ PG
Sbjct: 27 PLTPLRFLERSADVHPGRTACVDGPRRV------TFAAMRADAVLMARALRRRGLRPGDR 80
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V ++A N FAVP++G + INTRL + I H+ +++F + L+L
Sbjct: 81 VGMLASNSYEALLAQFAVPLAGGVLVAINTRLAPAEVRYICDHAGIRILFGEQ---DLIL 137
Query: 127 EVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG-----DPQFS 181
VLI D S P PR P V T ++ LA+G +P
Sbjct: 138 ACRRTLASAGLVETFVLIHD----GDGSQPQPRHPDGGVVTTVDDFLAEGVHHEGEPDDD 193
Query: 182 WVRP---KSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
P + P+ +NYT GTT PKGVV ++ ++ A+ + + +V LWTLP
Sbjct: 194 TTFPFAVDDETSPIAINYTSGTTGRPKGVVYTHRGAYLNALGEVTTQNFSRDTVYLWTLP 253
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK 298
MFH +GW W + V AT + LR P ++ LI GVT +CGAP VL L A
Sbjct: 254 MFHCSGWCTGWASMAVAATQIALRAVRGPEMWKLIDDEGVTSLCGAPAVLTTLVGDDAAH 313
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
+ + + ++TAG+PP ++ + E LG +V+H YG TE G C +P+W LP R
Sbjct: 314 RAEG-LSVVTAGAPPSPTIIEQCEELGIVVTHVYGLTESYGPYTLCEPQPEWAGLPVAAR 372
Query: 359 ASLKARQGVRTIGLTEVDIVDP--------ETGLSVKRDGQTRGEIVMRGGSLMLGYLKD 410
A LKARQGV I + +V+ T + V DG+T GEIV+ G +M Y +
Sbjct: 373 AKLKARQGVPMITSADARVVEAVPVGAPADTTLVDVPSDGETMGEIVLGGNGVMKEYFHN 432
Query: 411 PEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVN 470
P+AT++ G ++TGD+ + H DGY++I DRSKDV+ISGGENIS+ E+E + SHP +
Sbjct: 433 PDATAEAFVGGWFHTGDLAVKHADGYIQILDRSKDVVISGGENISTIEVEQAVISHPAIA 492
Query: 471 EAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMM---TTEKDIIQYCRARIPRYMVPKTVVF 527
+ AVVG PD W E A+V L D+ + E+ +I +CR I Y VP+
Sbjct: 493 DVAVVGAPDDRWGERLRAYVVLDPSVDATAAVPGGEVEQSVIDHCRGLIAGYKVPRDYRV 552
Query: 528 IDELPKTATGKVQKYVLGDIA 548
IDELP+T+TGKV+K VL D A
Sbjct: 553 IDELPRTSTGKVRKNVLRDEA 573
>gi|326381600|ref|ZP_08203294.1| AMP-binding enzyme [Gordonia neofelifaecis NRRL B-59395]
gi|326199847|gb|EGD57027.1| AMP-binding enzyme [Gordonia neofelifaecis NRRL B-59395]
Length = 542
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 202/555 (36%), Positives = 297/555 (53%), Gaps = 40/555 (7%)
Query: 8 PANS---CPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPG 64
PA S PLTPL F++RA D + I T+ + +LA++L + G+ G
Sbjct: 4 PARSGLDTPLTPLRFLDRAVEVHPDKLAAIDGGRRLTYREVAADVTRLANALRASGLTAG 63
Query: 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V+ ++ N M HFAVP++G + INTRL + I HS ++L+F D
Sbjct: 64 ERVAFLSTNSLEMLVAHFAVPLAGGVLVAINTRLAPAEVQYICDHSGARLLFGDG----- 118
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD----TYENMLAKG-DPQ 179
+L P L T + PP+ D++ Y+ ++A+G D
Sbjct: 119 -----ALLDPLGD---LEFAT----VGEVVETPPQ--DGDYLGGDRIRYDEVMARGSDDA 164
Query: 180 FSWVRPKSDLDPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
SW +D D ++ +NYT GTT PKGV+ ++ ++ ++ + + + LWTLP
Sbjct: 165 LSW--DVADEDAVISINYTSGTTGKPKGVMYTHRGAYLASLGNAMTQGFGIDTRYLWTLP 222
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK 298
MFH NGW W V T+VCLR ++ LI V M GAP VL L+++ EA
Sbjct: 223 MFHCNGWCGPWAVTAVAGTHVCLRAVRGDDMWRLIDTEQVNQMSGAPTVLTTLATAGEAH 282
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
++DRP+ I TAG+PP ++ +LG + H YG TE G C W++L E
Sbjct: 283 RMDRPLTIATAGAPPSPTIIRAIGNLGIRLVHVYGLTETYGPYSVCEPSDGWSELSGDEL 342
Query: 359 ASLKARQGVRTIGLTEVDIVDPETG-----LSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
A +RQGV + + +V PE + V+ DG GEIVMRG +M GY +DPE
Sbjct: 343 AVRMSRQGVGMLTADRLRVVLPEPADDGSLVDVEPDGVQMGEIVMRGNVVMKGYFEDPER 402
Query: 414 TSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
T++ G +++GD+G+MHPDGY+++ DR+KDVIISGGENIS+ E+E + SHP V + A
Sbjct: 403 TAEAFAGGWFHSGDLGVMHPDGYVQLLDRAKDVIISGGENISTIEVEQAVVSHPAVLDVA 462
Query: 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPK 533
V+G PD W E P A+ L+ G TE +I + ++RI Y P+ V F+D+LPK
Sbjct: 463 VIGVPDDKWGERPKAYAVLRPGE-----QVTEAAVIAHVKSRIASYKAPREVEFVDDLPK 517
Query: 534 TATGKVQKYVLGDIA 548
T+TGK++K L D A
Sbjct: 518 TSTGKIRKNELRDAA 532
>gi|395333883|gb|EJF66260.1| AMP-dependent synthetase and ligase [Dichomitus squalens LYAD-421
SS1]
Length = 577
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 213/566 (37%), Positives = 291/566 (51%), Gaps = 53/566 (9%)
Query: 8 PANSCPLTPLGFIERAATACDDCPSIIYNDT----TYTWSQTYRRCLQLASSLSSFGINP 63
P + L PL F+ R+A +I++ D Y+++ +R A L GI P
Sbjct: 43 PVHLHALNPLAFVLRSAQIYSTKLAIVHPDVRHPVIYSYAVWAQRIQNFAYGLLEAGIQP 102
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G ++ IAPNIP++ E + V + AI INTRL ++ IL+HS +KL+FVDH S+
Sbjct: 103 GDRIAFIAPNIPSIAEAYHGVLGARAIICAINTRLTHGEVAYILEHSGAKLIFVDHESAH 162
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
L+ +K P +V+ KE D YE L G +FS
Sbjct: 163 LV--------KGAKAPVIVVNDTGKED----------------DPYEQFLTSGR-KFSNE 197
Query: 184 RPKSDLD-------PMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWT 236
R + L+ LNYT GTT PKGV+ ++ AV + D + + S LW
Sbjct: 198 RGWAGLEWERNEDAGCALNYTSGTTGRPKGVLTTLIGSYLAAVANAYDTGMNRDSTYLWI 257
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
LPMFH +GW+F W A +CLR P ++ + GVTH CGAP V L ++P
Sbjct: 258 LPMFHASGWTFPWAVTFASAAQICLRSVSYPHIWNHLINSGVTHYCGAPTVQIGLINAPM 317
Query: 297 AKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
A++L++PV + AGS P A ++ E H YG + + C ++P W
Sbjct: 318 ARRLEKPVFAIIAGSAPTAHLIGELEKRNIKPVHTYGPSTV------CYYQPDWTSRALD 371
Query: 357 ERASLKARQGVRTIGLTEVDIVDP-ETGLS-------VKRDGQTRGEIVMRGGSLMLGYL 408
ERA L ARQG EV +V P + G S V +DGQT GEIV RG +M Y
Sbjct: 372 ERARLLARQGHAFATAEEVRVVFPLKEGESLDAPLVDVPKDGQTMGEIVFRGNIVMKEYF 431
Query: 409 KDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPM 468
KDPEAT K + G + +GD+ + HPDGY+ I DRSKD+IISGGEN SS IE L +HP
Sbjct: 432 KDPEATRKAFRGGYFNSGDLAVWHPDGYIAIMDRSKDIIISGGENASSLAIEQELSTHPD 491
Query: 469 VNEAAVVGRPDPFWQEIPCAFVSL---KTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTV 525
V E +VV R P W E P AFV L K +G EKD+ ++ R R+P + P+ V
Sbjct: 492 VLEVSVVARSHPKWGERPMAFVILHPQKAEKWAGRHSEFEKDLKEHARKRLPGFACPEWV 551
Query: 526 VFIDELPKTATGKVQKYVLGDIANSM 551
+ ELPKT+TGK+QK L I +
Sbjct: 552 SIVPELPKTSTGKIQKVELRKIVAKL 577
>gi|449547132|gb|EMD38100.1| hypothetical protein CERSUDRAFT_93621 [Ceriporiopsis subvermispora
B]
Length = 552
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 214/560 (38%), Positives = 284/560 (50%), Gaps = 64/560 (11%)
Query: 8 PANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTY----RRCLQLASSLSSFGINP 63
P + L PL F+ R+A D +I + D Y TY +R LA +L GI P
Sbjct: 27 PVHRHALNPLAFVLRSAQIYPDKLAIAHPDVPYPVYYTYSVWTQRIQNLAYALLQAGILP 86
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+VIAPN P + E H V + A+ IN+RL + ++ IL HS SKL+ VDH
Sbjct: 87 GDRVAVIAPNTPVIAEAHHGVLAARAVVCPINSRLTPQEVAYILDHSGSKLIIVDHEFKH 146
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLA--------K 175
L+ V+I++D S D YE L+ K
Sbjct: 147 LV----------QGAKAQVIISNDTGRSG--------------DPYEGFLSAGRKFSGEK 182
Query: 176 GDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLW 235
G P W R + P L YT GTT PKGV+ + ++ AV + + +
Sbjct: 183 GWPGLEWER--DEEAPSTLCYTSGTTGRPKGVITTLRGSYLAAVANAYETGI-------- 232
Query: 236 TLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP 295
LPMFH +GW++ W + A + LR P ++ + GVTH C AP V L ++P
Sbjct: 233 -LPMFHASGWTYPWAITLASALQITLRSVSYPHIWNHLLSSGVTHYCAAPTVQIGLINAP 291
Query: 296 EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
+A++L RPV + AGS P A ++ E +G H YG C +P W L
Sbjct: 292 QARRLPRPVTAIIAGSAPTAHLISELEKIGINPVHTYGPC------TKCYGQPSWASLSL 345
Query: 356 RERASLKARQGVRTIGLTEVDIVDP--ETGL------SVKRDGQTRGEIVMRGGSLMLGY 407
RA ARQGV + E +V P E GL V +DG T GEIVMRG +M Y
Sbjct: 346 ENRAKHIARQGVSFLTADETRVVYPPKEGGLLDSELVDVPKDGNTMGEIVMRGNIVMKEY 405
Query: 408 LKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHP 467
+DPEAT K + G Y +GD+ +MHPDGY+EI+DRSKD+IISGGEN SS IE L SHP
Sbjct: 406 FRDPEATRKAFRGGYYNSGDLAVMHPDGYIEIQDRSKDIIISGGENASSLAIEQELSSHP 465
Query: 468 MVNEAAVVGRPDPFWQEIPCAFVSL---KTGTDSGGMMTTEKDIIQYCRARIPRYMVPKT 524
+ E +VV RP P W E P AFV L K +G E D+ ++ R R+P + P+
Sbjct: 466 DILEVSVVARPHPKWGERPMAFVILHPQKLDKWTGKYDEFENDLKKHARVRLPGFACPEW 525
Query: 525 VVFIDELPKTATGKVQKYVL 544
V +DELPKTATGK+QK VL
Sbjct: 526 VKVVDELPKTATGKIQKIVL 545
>gi|300722165|ref|YP_003711448.1| AMP-dependent synthetase/ligase [Xenorhabdus nematophila ATCC
19061]
gi|297628665|emb|CBJ89243.1| putative AMP-dependent synthetase/ligase [Xenorhabdus nematophila
ATCC 19061]
Length = 535
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 202/541 (37%), Positives = 298/541 (55%), Gaps = 23/541 (4%)
Query: 7 NPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHV 66
N N L+P+ F++RA + D +II +TW Q +RC ++A SL GI GH+
Sbjct: 9 NKHNDVALSPILFLKRAVLSNGDDIAIIDGKYRWTWRQYAQRCERIAVSLQQMGIEKGHI 68
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
VS + PN + ELHFAVP++G I N ++TR D+ T++ I + K++ +D + SLL
Sbjct: 69 VSTLLPNSNELLELHFAVPLAGGILNALSTRTDSATLNFIFEKLSPKILIIDKIFISLLD 128
Query: 127 EVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK 186
V K P ++ITD +S+ P +P F+ YE+++ + + P
Sbjct: 129 HVAF------KKPIQIIITDQ----DNSTIPISVPEYKFL-PYESLITEYTSKTLSFIPI 177
Query: 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
++ + + +N T GT+ PK VV ++ F+ A+ +++DW +PK+ LWTLPMFH NGW
Sbjct: 178 NEHEAISINSTSGTSGQPKLVVYSHRGAFLNAISNILDWDMPKRPTYLWTLPMFHCNGWC 237
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQLDRPV 304
F W A T++C+RKFDA LI+ H VTH CGAPIV + L + + K + V
Sbjct: 238 FPWAIAARAGTHICMRKFDAEEAIQLIQAHNVTHYCGAPIVHHSLGKAAQKHGKHFNGLV 297
Query: 305 RILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
L AG+PP V +++G + YG TE G C K +W LP E K R
Sbjct: 298 SALIAGAPPTEMVFSLLDAVGIKGTQVYGLTETYGPITVCENKDEWKNLPQSEMILKKMR 357
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR-Y 423
QG+ + EV ++D V DG+T GEI +R G+++ Y DPE G+ +
Sbjct: 358 QGIVSNLQGEVSVIDENRQSEVPFDGKTIGEIAIR-GNIVASY--DPERHITPETTGQWF 414
Query: 424 YTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
YTGD+ ++ PDGY++I DR KD+IISGGENISS E+E+ L HP V AA+V +PDP+W
Sbjct: 415 YTGDLAVVDPDGYIKIIDRKKDIIISGGENISSLELENALSGHPGVFAAAIVAKPDPYWG 474
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYV 543
E+P AF+ L TE+++ Y + R+ PK F+ LP+ GK K
Sbjct: 475 EVPHAFIELNENAS-----VTEQELNDYICTIVARFKRPKGYTFMT-LPRNVNGKTIKEQ 528
Query: 544 L 544
L
Sbjct: 529 L 529
>gi|374632537|ref|ZP_09704911.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Metallosphaera yellowstonensis MK1]
gi|373526367|gb|EHP71147.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Metallosphaera yellowstonensis MK1]
Length = 554
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 200/538 (37%), Positives = 288/538 (53%), Gaps = 22/538 (4%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTPL F+ER+ D +++Y ++ + + A++L + ++ VS I+ N
Sbjct: 22 LTPLTFLERSGRYFKDKVAVVYRGERKSYGEFRDEVFRQANALKNSALSKEGKVSFISRN 81
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
P F VP +G + IN RL + IS I+ HSES+ V VD L V
Sbjct: 82 RPEFLASFFGVPWAGGVLVPINFRLSPKEISYIINHSESEFVVVDEPFLDQLRPV----- 136
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIPPADFV-DTYENMLAKGDPQFSWVRPKSDLDPM 192
K+VL+ D+ SSP + V TY L +G P + + + +
Sbjct: 137 KDEVKAKIVLLEDE------SSPSKEEIRKELVWKTYAEFLKEGSPTPLPIPVEDEYSMI 190
Query: 193 VLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAA 252
L YT GTT PKGV+ ++ F+ A+ ++ + SV LWTLPMFH GW F W
Sbjct: 191 TLYYTSGTTGLPKGVMHHHRGAFLNAMGEALEHQMDLNSVYLWTLPMFHAAGWGFPWATV 250
Query: 253 VVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIV-LNLLSSSPEAK-QLDRPVRILTAG 310
VGATNVCL K D V LI + GVTHM GAP V +NL+ + R V +L AG
Sbjct: 251 AVGATNVCLDKVDPTVVHKLIEEEGVTHMSGAPTVYVNLVDYMKRNNLKFSRRVHMLIAG 310
Query: 311 SPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTI 370
+ P L + LG + H YG TE G + C W+ +W+ L E+A LKARQGV +
Sbjct: 311 AAPAPATLRAVQELGGYMCHVYGLTETYGPHSICEWRKEWDLLSLEEQAKLKARQGVPYV 370
Query: 371 GLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGM 430
G E+D+ D E V DG+T GE+VMRG ++ LGY K+PE T++ ++G + +GD +
Sbjct: 371 GF-EMDVFDSED-RPVPWDGKTIGEVVMRGHNVALGYYKNPEKTAESFRNGWFRSGDAAV 428
Query: 431 MHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFV 490
+HPDGY+E+ DR KD+I +GGE +SS +E L P V AV G PD W E+ A +
Sbjct: 429 VHPDGYVEVVDRFKDLINTGGEKVSSIMVEKTLMELPGVKAVAVYGTPDEKWGEVVTARI 488
Query: 491 SLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIA 548
L G + T +++I++C+ ++ + PK V F +P TATGK+QKY+L + A
Sbjct: 489 ELMEGAE-----LTAEEVIKFCKEKLAHFECPKIVEF-GPIPTTATGKMQKYILRNEA 540
>gi|339626426|ref|YP_004718069.1| AMP-dependent synthetase and ligase [Sulfobacillus acidophilus TPY]
gi|379005885|ref|YP_005255336.1| o-succinylbenzoate--CoA ligase [Sulfobacillus acidophilus DSM
10332]
gi|339284215|gb|AEJ38326.1| AMP-dependent synthetase and ligase [Sulfobacillus acidophilus TPY]
gi|361052147|gb|AEW03664.1| o-succinylbenzoate--CoA ligase [Sulfobacillus acidophilus DSM
10332]
Length = 520
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 212/535 (39%), Positives = 295/535 (55%), Gaps = 32/535 (5%)
Query: 12 CPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
P+TPL F RA D +++ T+ R +LA L + G+ PG V+V+A
Sbjct: 3 VPVTPLDFGRRAFKLYPDRLAVVDGPLRLTYRDLAERTYRLAHGLKAAGLRPGDRVAVLA 62
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN M E + VP +G + +NTRL IL HS S+ + D L+ V
Sbjct: 63 PNTHTMLETFYGVPWAGLVLVPLNTRLTPEEYRYILTHSGSRALIADGRLWPLIAPVAEG 122
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAK--GDPQFSWVRPKSDL 189
P L+L+ D PP YE+ L++ DP V ++ L
Sbjct: 123 LP-------LILVDGDA------------PPGTL--AYEDWLSRQSADPIPLDVPDENGL 161
Query: 190 DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249
+ LNYT GTTS PKGV+ ++ F+ AV+ L+ + L TLP+FH NGW W
Sbjct: 162 --ITLNYTSGTTSRPKGVMLTHRNTFMNAVNFLLHHRMAITDRYLHTLPLFHVNGWGDAW 219
Query: 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTA 309
VGA +V + K + ++ LI + GVT +CGAP VLN+L+++P A LD PVRI TA
Sbjct: 220 AVTAVGAVHVMMSKVEGQAMWDLIHQEGVTALCGAPAVLNMLATTPHAP-LDHPVRIATA 278
Query: 310 GSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRT 369
G+PPPA +L G + H YG TE++ +P+ + L A+ + QGV
Sbjct: 279 GAPPPAALLQTLAQEGIEILHVYGLTEVSPWITVSEIRPEDHTLSPEALAAKMSCQGVEQ 338
Query: 370 IGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVG 429
I EV +V E G V DGQ GEIV R +M GY +DPE T++ ++DG ++TGD+
Sbjct: 339 ILAGEVKVVH-EDGTEVAHDGQDLGEIVNRSNVVMAGYYQDPEKTAEVIRDGWFHTGDLA 397
Query: 430 MMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAF 489
++H DG ++I+DR+KD+IISGGENISS E+E VLY HP V EAAVV PD W E P AF
Sbjct: 398 VVHSDGSIQIRDRAKDIIISGGENISSVEVEDVLYRHPGVYEAAVVAVPDDKWGETPKAF 457
Query: 490 VSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
+ K GM T +++ Q+CR R+ Y VP + F++ LP+TA+GKVQKYVL
Sbjct: 458 IVPKP-----GMTVTAEELRQFCRDRLAHYKVPTSFEFVEALPRTASGKVQKYVL 507
>gi|94442938|emb|CAJ91151.1| AMP-binding protein [Platanus x acerifolia]
Length = 208
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 148/208 (71%), Positives = 176/208 (84%)
Query: 228 PKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIV 287
PKQ V LWTLPMFH NGWSF WG A VG TN+CLRKFDA T++ IRKHGVTHMCGAP+V
Sbjct: 1 PKQPVYLWTLPMFHANGWSFPWGMAAVGGTNICLRKFDAATIYGAIRKHGVTHMCGAPVV 60
Query: 288 LNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWK 347
LN+L+++P+ L PV+ILTAG+PPPA VL RTE+LGF+VSHGYG TE AG+ VSCAWK
Sbjct: 61 LNMLANAPDGASLSHPVQILTAGAPPPAAVLFRTEALGFVVSHGYGLTETAGLVVSCAWK 120
Query: 348 PKWNKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGY 407
P+WN+ PA ERA LKARQGVR G+ EVD+VDP++G+SVKRDG + GEIV+RGG +MLGY
Sbjct: 121 PQWNRFPATERAKLKARQGVRLAGMAEVDVVDPDSGVSVKRDGSSLGEIVLRGGCIMLGY 180
Query: 408 LKDPEATSKCMKDGRYYTGDVGMMHPDG 435
LKDP ATSK MK+G +YTGDVG++HPDG
Sbjct: 181 LKDPAATSKSMKNGWFYTGDVGVIHPDG 208
>gi|259418997|ref|ZP_05742914.1| AMP-dependent synthetase and ligase [Silicibacter sp. TrichCH4B]
gi|259345219|gb|EEW57073.1| AMP-dependent synthetase and ligase [Silicibacter sp. TrichCH4B]
Length = 525
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 197/550 (35%), Positives = 296/550 (53%), Gaps = 39/550 (7%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVS 68
AN LTPL F+ RA A + P++ + + +T+ + ++A L + G+ PG VVS
Sbjct: 12 ANHHALTPLSFLRRAEDAFGERPAVAWKEQCWTYREFAGLVRRMAHWLQAQGVGPGDVVS 71
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
++ PN P + HFAVP GA+ NT+NTRL A ++ I HS +L+ D + + L V
Sbjct: 72 LVLPNRPELLAAHFAVPGLGAVLNTVNTRLTADEVAYIADHSGCRLLIGDAQTLTTLDRV 131
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV-RPKS 187
P L T D +D ++ L P+ + + P +
Sbjct: 132 T--------VPMTQLCTAPGA-------------GDGLDLFDTSL----PEVTLITSPLA 166
Query: 188 DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSF 247
+ D + LNYT GTT PKGV+ ++ ++ A+ ++ + + LWTLPMFH GW+
Sbjct: 167 ETDAIALNYTSGTTGQPKGVIYTHRGAYLNALGNVASLGISDGTRYLWTLPMFHCYGWTH 226
Query: 248 TWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRIL 307
TW G +VCL + + + LI +H VTH+C P+VL +L + + PV++
Sbjct: 227 TWAVTAAGGLHVCLDRIEPRVMIDLIARHEVTHLCCPPVVLYMLLEKMK-EPAPCPVKVG 285
Query: 308 TAGSPPPAPVLLRTESLGFIVSHGYGKTEIAG-VNVSCAWKPKWNK-LPARERASLKARQ 365
T G+ P +L R LGF + H YG TE G V ++ P ++ P +RA AR
Sbjct: 286 TGGAAPTPALLSRMAELGFDIVHLYGLTESYGPVTLN---DPDFSAGTPIADRARRMARH 342
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYT 425
G+R V ++DPE G V +DG+T GEI + G ++M GY +DP+AT + G + T
Sbjct: 343 GLRHHTTGSVQVLDPE-GQPVPQDGETTGEIALSGNTVMAGYYRDPKATEAALGGGVFRT 401
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+ + HPDG +EI+DR+KD+IISGGEN SS E+E++L+ HP + AAVV P P W E
Sbjct: 402 GDLAVWHPDGEIEIQDRAKDIIISGGENFSSLEVEAILHQHPDILLAAVVAAPHPKWGET 461
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLG 545
AFV LK+G + + +CR + + P+ + + LPKTATGKVQK+ L
Sbjct: 462 AWAFVELKSGCTP-----CTETLDDFCREHLAGFKRPRRFI-LGPLPKTATGKVQKFTLR 515
Query: 546 DIANSMSMSH 555
+ A M+ H
Sbjct: 516 ETAREMTNGH 525
>gi|297738170|emb|CBI27371.3| unnamed protein product [Vitis vinifera]
Length = 444
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 198/523 (37%), Positives = 264/523 (50%), Gaps = 128/523 (24%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFG 60
MDRL + AN LTP+ F+ RAA A S+IY T +TW QTY RC +LASSL
Sbjct: 1 MDRLPKSAANYTALTPINFLTRAAVAYARKTSLIYESTRFTWQQTYERCCRLASSLHRLN 60
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ VVSV+APNIPAMYE+HFAVPM GA+ NTIN RLDA I+ IL HSE+K+ FVD+
Sbjct: 61 VAKNDVVSVLAPNIPAMYEMHFAVPMCGAVLNTINIRLDAHNIATILGHSEAKVFFVDYQ 120
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
+ P ++ L+L+ KE + ++A G+P +
Sbjct: 121 -----------YVPLAREALLLLMAQHKE--------------------KLLVANGNPGY 149
Query: 181 SWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
+ V + + DP+ LNYT GTTSAPKGVV ++ ++ + L+ W + + V +W+LPMF
Sbjct: 150 APVEVEDEWDPIALNYTSGTTSAPKGVVYSHRGAYLSTLSLLLGWEMGGEPVYMWSLPMF 209
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H NGW+FTWG A G T+VC+R A ++ I H
Sbjct: 210 HCNGWTFTWGVAARGGTSVCIRNTTAYDMYRNIALHN----------------------- 246
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
ILT G+PPPAP+L + E+LGF V H YG TE G + C W+ +WN+LP
Sbjct: 247 -----ILTGGAPPPAPLLEKIEALGFHVVHAYGLTEATGPALVCEWQAEWNRLP------ 295
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
RD Q + LK P C
Sbjct: 296 ---------------------------RDHQAK--------------LKAPWGKLCCA-- 312
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
+ IKDRSKDVIISGGENISS E+ES+LY HP V EAAVV P P
Sbjct: 313 ----------------VAIKDRSKDVIISGGENISSVEVESILYRHPRVLEAAVVAMPHP 356
Query: 481 FWQEIPCAFVSL---KTGTDSGGMMTTEKDIIQY-CRARIPRY 519
W E PCAF+++ +TG + +T++ + C R+ R+
Sbjct: 357 KWGESPCAFITINKNQTGQNDDEQSSTQQWPARLSCNPRVSRH 399
>gi|392953268|ref|ZP_10318822.1| AMP-dependent synthetase and ligase [Hydrocarboniphaga effusa
AP103]
gi|391858783|gb|EIT69312.1| AMP-dependent synthetase and ligase [Hydrocarboniphaga effusa
AP103]
Length = 523
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 202/534 (37%), Positives = 289/534 (54%), Gaps = 28/534 (5%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTPL F+ RA +++ + ++SQ RC + +++L G+ G V+ IAPN
Sbjct: 5 LTPLDFLRRARKVHGAREAVVDENVRLSYSQFGDRCDRWSATLQRLGVGQGDRVATIAPN 64
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
E +AVP GA+ +N RL ++ HS SK++ V
Sbjct: 65 THQHLEQFYAVPQIGAVIVPMNYRLTEEDFVYMVTHSGSKVLCV---------------- 108
Query: 134 PHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMV 193
HS +V D+ + ++D Y +++ F V + + D +
Sbjct: 109 -HSDYLDMVDRVRDRMDCVQHFVALEGSKSGWLD-YASLVESSPADFERVEIQ-ETDLLS 165
Query: 194 LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAV 253
+NYT GTT+ PKGV+ ++ ++ ++ +++ + LWTLPMFH NGW+FTW
Sbjct: 166 INYTSGTTARPKGVMITHRNAWMNSIATMVHVPMTPAERYLWTLPMFHANGWTFTWTVTA 225
Query: 254 VGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQLDRPVRILTAGS 311
G +VCLRK DA ++ L ++ +C AP VL +++ P E ++ + VR+LTAG+
Sbjct: 226 AGGAHVCLRKVDALQIYRLCEVERISMLCAAPTVLISIANGPAEERARVKKGVRVLTAGA 285
Query: 312 PPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTI 370
PP A + E LG+ ++ YG TE C P+ L RERA +KARQGV I
Sbjct: 286 PPAAATIETMEQELGWTITQVYGLTETTPFIAICEAVPEHVGLGVRERAVIKARQGVELI 345
Query: 371 GLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGM 430
G E+ +VD E V DG+T GEIV RG +M GY ++ EAT K G ++TGD +
Sbjct: 346 GAAELRVVD-EAMNDVPHDGETMGEIVARGNVVMKGYYQNEEATEKAFAGGWFHTGDAAV 404
Query: 431 MHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFV 490
+HPDGY+EI+DR KDVIISGGENISS E+ESVL HP V E AVVG P P W E P AFV
Sbjct: 405 IHPDGYVEIRDRFKDVIISGGENISSIEVESVLLRHPAVLEVAVVGMPHPKWGESPNAFV 464
Query: 491 SLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
L+ G + TE +++ Y R + R+ P I ELPKTATGK+QK+ L
Sbjct: 465 VLRAGAQA-----TEDELMAYARDNMARFKAPSKFHLIAELPKTATGKIQKFQL 513
>gi|441517489|ref|ZP_20999225.1| putative fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 = NBRC
16056]
gi|441455770|dbj|GAC57186.1| putative fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 = NBRC
16056]
Length = 544
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 188/541 (34%), Positives = 290/541 (53%), Gaps = 21/541 (3%)
Query: 13 PLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAP 72
PL+PL F+ R+A ++I ++++ LA +L++ G+ PG V+ +A
Sbjct: 10 PLSPLHFLYRSAQVHPTKLAVIDGGRRLSYAELAADVQLLADALAASGVQPGDKVAYLAT 69
Query: 73 NIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLF 132
N + HFAVP++G + INTRL + I HS + L+ D + L EV
Sbjct: 70 NSLELLAAHFAVPLAGGVLVAINTRLAPDEVRYICDHSGAVLLIGDGPLLAGLGEV---- 125
Query: 133 PPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPM 192
+ + + E S + V Y+ ++A+GD +D + +
Sbjct: 126 -------EFATVREIVETPSQEGEYLGAQGREGVVRYDALMARGDGGAQRAWEVADENTV 178
Query: 193 V-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGA 251
+ LNYT GTT PKGV+ ++ ++ ++ +++ + LWTLPMFH NGW W
Sbjct: 179 ISLNYTSGTTGRPKGVMYTHRGAYLASLGNVVTQGFSIDTNYLWTLPMFHCNGWCGPWAL 238
Query: 252 AVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGS 311
V T+VCLR ++ LI + M GAP VL L+++PEA + P+ I TAG+
Sbjct: 239 TAVAGTHVCLRAVRGDDMWRLIDGENINQMSGAPTVLTTLATAPEAHPMRTPMAIATAGA 298
Query: 312 PPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIG 371
PP ++ LG + H YG TE G C P W++L A E + ARQGV +
Sbjct: 299 PPSPTIIKAIHHLGIEIVHVYGLTETYGPYAVCEPDPSWSELSADELSVRMARQGVGMLT 358
Query: 372 LTEVDIVDPE----TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGD 427
+ +V P+ + V DG GEIVMRG +M GY +DPE T++ G +++GD
Sbjct: 359 ADRLRVVLPDLVDGQLVDVAADGAQMGEIVMRGNVVMKGYYEDPERTAEAFAGGWFHSGD 418
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+G+MHPDGY+++ DR+KDV+ISGGENIS+ E+E + SHP V + AV+G PD W E P
Sbjct: 419 LGVMHPDGYVQLLDRAKDVVISGGENISTIEVEQAVVSHPEVADVAVIGVPDDKWGERPK 478
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDI 547
A+V L G+ ++ ++I + +++I Y P+ + F+ ELPKT+TGK++K L D
Sbjct: 479 AYVVLTEGS-----TLSQDEVIAHVKSKIASYKAPREIEFVAELPKTSTGKIRKNELRDA 533
Query: 548 A 548
A
Sbjct: 534 A 534
>gi|359476911|ref|XP_003631909.1| PREDICTED: LOW QUALITY PROTEIN: medium-chain-fatty-acid--CoA
ligase-like [Vitis vinifera]
Length = 419
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 168/365 (46%), Positives = 231/365 (63%), Gaps = 17/365 (4%)
Query: 8 PANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVV 67
P N PL+P+ F+ER+ATA D S++Y YTWS+T RCL+LAS+L+ GI+ G VV
Sbjct: 52 PVNDVPLSPITFLERSATAYRDRTSVVYGSVKYTWSETQERCLKLASALTQLGISRGDVV 111
Query: 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLE 127
+V+APN+PAMYELHF VPM+GA+ T+NTR ++ +S +L+HSE+K++FVD+ LLE
Sbjct: 112 AVLAPNVPAMYELHFGVPMAGAVLCTLNTRHNSAMVSTLLRHSEAKIIFVDY----QLLE 167
Query: 128 VVS-----LFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
+ L +K P LVLI + S SPP +D + YE++LA G +F
Sbjct: 168 IAHVALDLLKKTETKPPILVLI-----VESDGSPPTNFSTSDGYE-YESLLATGQSEFEI 221
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
RP + DP+ +NYT GTTS+PKGVV ++ ++ ++ + + + V LWT+PMFH
Sbjct: 222 RRPIDEWDPISVNYTSGTTSSPKGVVYNHRGAYLNSLATFVLHGMGSMPVYLWTVPMFHC 281
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP--EAKQL 300
NGW WG A G TNVCLR+ +F I H VTHM GAP VLN++ +SP + + L
Sbjct: 282 NGWCLPWGVAAQGGTNVCLRRVIPKDIFDSIALHKVTHMGGAPTVLNMIVNSPVSDRRPL 341
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
V ++T GSPPP P+L + E LGF VSH YG TE G C WKP+W+ LP ERA
Sbjct: 342 PSKVEVMTGGSPPPPPILRKMEELGFGVSHLYGLTETYGPGTXCTWKPEWDSLPPDERAK 401
Query: 361 LKARQ 365
+K R+
Sbjct: 402 IKVRR 406
>gi|111025247|ref|YP_707667.1| AMP-binding enzyme [Rhodococcus jostii RHA1]
gi|110824226|gb|ABG99509.1| AMP-binding enzyme [Rhodococcus jostii RHA1]
Length = 532
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 192/544 (35%), Positives = 285/544 (52%), Gaps = 35/544 (6%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
+TPL F+ER+A + +++ ++S +LA L G+ PG V+ +A N
Sbjct: 1 MTPLKFLERSAEVHPNKTAVVDGGRRISYSDLASIVTRLAHGLRRSGVGPGDRVAYLATN 60
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKL-----VFVDHLSSSLLLEV 128
+ H+AVP+ GA+ INTRL I I HSE+ L VF++ L + LL V
Sbjct: 61 SAELLAAHYAVPLIGAVLVAINTRLSPPEIEYICNHSEAVLLLGEPVFLEQLQDTSLLTV 120
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG-DPQFSWVRPKS 187
+ P+ D + ++ S TY+ ++A+G + + W
Sbjct: 121 RETV----QLPQ----QDGGYVDTAQSHL----------TYDALMARGSEERLPW-EVDD 161
Query: 188 DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSF 247
+ + +NYT GTT PKGV+ ++ ++ ++ + + LWTLPMFH NGW
Sbjct: 162 ETRTISINYTSGTTGRPKGVMYTHRGAYLNSLSQIHHQHFDIDTKYLWTLPMFHCNGWCG 221
Query: 248 TWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRIL 307
W T+VC+R +++LI + HM GAP VL L+++ A LDR + I
Sbjct: 222 PWAVTAASGTHVCIRVVRGDAMWSLIDSEKIDHMSGAPTVLTTLATADGAHPLDRSMTIT 281
Query: 308 TAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
TAG+PP + +LG + H YG TE G C + W L A L ARQGV
Sbjct: 282 TAGAPPSPTTIRAVRALGAEIVHVYGLTETYGPCAVCEPQADWAALDEDTLARLLARQGV 341
Query: 368 RTIGLTEVDIVDPETG-----LSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
+ V +V + G + V +G GEIVMRG +M GY D AT++ G
Sbjct: 342 GMLASGPVRVVRTQRGPHGELVDVASNGTEIGEIVMRGNIVMKGYFGDDSATAEAFSGGW 401
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
+++GD+G+MHPDGY+++ DR+KD++ISGGENIS+ E+E VL SHP V + AV+G PD W
Sbjct: 402 FHSGDLGVMHPDGYIQLMDRAKDIVISGGENISTIEVEQVLMSHPSVLDVAVIGVPDTKW 461
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E P AFV LKT + ++ D+ Q+ R I + P+ +VF+ ELPKT+TGK +K
Sbjct: 462 GERPKAFVVLKTNS-----TVSDCDLTQFAREHIAAFKAPREIVFLPELPKTSTGKTRKN 516
Query: 543 VLGD 546
L D
Sbjct: 517 ELRD 520
>gi|288555310|ref|YP_003427245.1| fatty acyl CoA synthase [Bacillus pseudofirmus OF4]
gi|288546470|gb|ADC50353.1| fatty acyl CoA synthase [Bacillus pseudofirmus OF4]
Length = 528
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 202/534 (37%), Positives = 292/534 (54%), Gaps = 28/534 (5%)
Query: 12 CPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL L F++ A D P+I+ + T T+ Q R QL+ L+ GI G V+ +A
Sbjct: 3 VPLVLLDFLDGAVELYGDKPAIVGEERTLTYQQLNERVQQLSYGLTKLGIQKGDKVAYLA 62
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN M E + V GA+ ++NTRL IL HSES+++FVD L+ V+
Sbjct: 63 PNTEDMLEGFYGVFQVGAVMTSLNTRLKPEDYLFILNHSESQVLFVDQELYPLVEPVIDK 122
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG-DPQFSWVRPKSDLD 190
+T K ++I KE + +YE L++ +F V P + D
Sbjct: 123 L----ETVKHIIIHGAKEDQQAGV------------SYERWLSQFPTDEFKRV-PLEEND 165
Query: 191 PMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
+ YT GTT PKGV+ +++ ++ A+ + V Q LL LPMFH NGW +
Sbjct: 166 LANILYTSGTTGNPKGVMLTHRSNYLHALSTQHHLRVSDQDTLLHVLPMFHVNGWGSPFY 225
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR--PVRILT 308
GAT V LRK D T+F I K+GVT AP VLN+L + + + + +R++
Sbjct: 226 YTANGATQVMLRKIDPKTIFEKIEKNGVTVAHMAPTVLNMLLEYAKTENVPKRDNMRVVI 285
Query: 309 AGS-PPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AGS PPPA V E LG+ YG TE + + + + + +A LKA+ G
Sbjct: 286 AGSAPPPAFVTRVEEELGWEFIQVYGMTESSPLVTTSQIRSEQLSFDDAAKARLKAKTGY 345
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGD 427
IG +++ +V+ E G V DG++ GEIV+R +M GY K+P+ATS+ ++DG +TGD
Sbjct: 346 SMIG-SKLKVVN-EYGEKVAADGKSIGEIVVRSNGVMEGYWKNPDATSETIRDGWLHTGD 403
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+ + GY+EI DR KDVIISGGENISS E+E VLY HP V EAAV+ P W E+P
Sbjct: 404 MATVDEHGYMEIVDRKKDVIISGGENISSIEVEGVLYEHPAVLEAAVIAVPHEKWGEVPH 463
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
A V L+ G TE+++IQ+ R+++ + PK+VVF + LPKTA+GK+QK
Sbjct: 464 AVVVLRE-----GHQLTEEEVIQFARSKMAHFKAPKSVVFAEALPKTASGKIQK 512
>gi|343429233|emb|CBQ72807.1| related to AMP-binding protein [Sporisorium reilianum SRZ2]
Length = 603
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 203/577 (35%), Positives = 290/577 (50%), Gaps = 45/577 (7%)
Query: 6 PN-PANSCPLTPLGFIERAATACDDCPSIIYNDTTY--TWSQTYRRCLQLASSLSSF-GI 61
PN P + LTP+ F+ RAA +I + + Y T+ Q RCL LA +L S G
Sbjct: 26 PNTPHHRSSLTPVAFLLRAALITPRKLAINHPERGYSFTYEQWAARCLSLAFALLSVPGF 85
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
G V+VI+PN P + + H+ +P G I IN R + ++ +L+HS S ++ DH
Sbjct: 86 EAGDRVAVISPNAPLIADAHWGIPAVGGIITPINIRNTPKEVAYVLEHSGSTIILCDH-- 143
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDD-----------KEISSSSSPPPRIPPADFVDTYE 170
E L P + V+I+ D K + R A+
Sbjct: 144 -----EFTHLVPQNPGQGVTVIISKDSGGQDADDGYEKFLDQGWQAWQRAEQAELQKYKA 198
Query: 171 NMLAKGDPQFSW---VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVV 227
+P+ W P+ + P+ L YT GTT PKGV+ ++ ++ AV + + +
Sbjct: 199 RTKPSAEPKTGWKLLYAPQDEEQPIALCYTSGTTGRPKGVLTNHRGAYLAAVANAFEANI 258
Query: 228 PKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIV 287
+ SV LW LPMFH GW+F W T+ +RK D ++ + HGVTH CGAP V
Sbjct: 259 TQDSVYLWVLPMFHACGWTFPWAVTASLGTHHTIRKVDNAVIWDALLHHGVTHYCGAPTV 318
Query: 288 LNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWK 347
L++ P+A++L+R V + A S P A +L + ESL H YG TE G ++
Sbjct: 319 QIGLTNHPDARKLERRVNVAVAASAPTANLLAKMESLNLHPVHVYGLTETYGPFTRRYFE 378
Query: 348 PKWNKLPARERASLKARQGVRTIGLTEVDIVDPETG--------LSVKRDGQTRGEIVMR 399
P+W +L RA + ARQG EV +V E+ + V+R+G GEIV+R
Sbjct: 379 PEWAQLDVDARARMMARQGHAYPTSDEVRVVRTESSTDKATDDLVDVERNGTETGEIVIR 438
Query: 400 GGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEI 459
G MLGY DP ATSK + G ++TGD+ + HP G ++I DR KD+IISGGENISS +
Sbjct: 439 GNMAMLGYYNDPAATSKAVMKGWFHTGDLAVRHPGGEIQILDRGKDIIISGGENISSLMV 498
Query: 460 ESVLYSHPMVNEAAVVGRPDPFWQEIPCAFV----------SLKTGTDSGGMMTTE--KD 507
E L +H V E V+ RP W E AFV L+ +G E
Sbjct: 499 EQELAAHADVLECCVIARPHEKWGERGQAFVVLTEQAKAKLDLQEVKKNGSKANVELIAT 558
Query: 508 IIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
+ Q+C+ R+ + VP+ +DELPKT+TGKVQK VL
Sbjct: 559 LKQHCKQRMSGFAVPEWFDIVDELPKTSTGKVQKNVL 595
>gi|388854205|emb|CCF52124.1| related to AMP-binding protein [Ustilago hordei]
Length = 604
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 205/585 (35%), Positives = 298/585 (50%), Gaps = 71/585 (12%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYNDTTY--TWSQTYRRCLQLASSL-SSFGINPGHVV 67
SC LTP+ F+ RAA + +I + + Y T+SQ RCL LA +L ++ G V
Sbjct: 32 SC-LTPVSFLLRAALITPNKLAISHPERNYSFTYSQWAARCLSLAFALLTTPNFKTGDRV 90
Query: 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLE 127
+VI+PN P + + H+A+P SG I IN R A+ ++ +L+HS S ++ DH E
Sbjct: 91 AVISPNAPLIADAHWAIPASGGIITPINIRNTAKEVAYVLEHSGSTIILCDH-------E 143
Query: 128 VVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG----------- 176
L P + V+I+ D + S P YEN L +G
Sbjct: 144 FAHLIPENPGPNITVVISKDSGGAESDDP------------YENFLDRGYLEWQRAEQKE 191
Query: 177 ------------DPQFSW---VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDS 221
+P+ W + P+ + P+ L YT GTT PKGV+ ++ ++ AV +
Sbjct: 192 LSAYASAPKPRAEPRTGWKLLLAPQDEEQPIALCYTSGTTGRPKGVLTNHRGAYLAAVAN 251
Query: 222 LIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHM 281
+ + + S LW LPMFH GW+F W AT+ +RK D ++ + HGVTH
Sbjct: 252 AFEANITQDSRYLWVLPMFHACGWTFPWAVTACLATHHTIRKVDNAVIWDALIDHGVTHY 311
Query: 282 CGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVN 341
CGAP V L++ P AK+L R V + A S P A +L + ESL H YG TE G
Sbjct: 312 CGAPTVQIGLTNHPSAKKLPRRVNVAVAASAPTANLLAKMESLNLHPVHVYGLTETYGPF 371
Query: 342 VSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETG-------LSVKRDGQTRG 394
++P+W KL RA + ARQG + +V +V ++ + V+R+G+ G
Sbjct: 372 TRRYFEPEWAKLDVDSRARMMARQGHSYLTSDQVRVVRTDSSNSKDGDLIDVERNGKETG 431
Query: 395 EIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENI 454
EIV+RG M+ Y DP ATSK + G ++TGD+ + HP G ++I DR KD+IISGGENI
Sbjct: 432 EIVIRGNMTMMAYYNDPLATSKAVLKGWFHTGDLAVRHPGGEIQILDRGKDIIISGGENI 491
Query: 455 SSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDS------------GGMM 502
SS +E L +H V E V+ RP W E AFV L + GG
Sbjct: 492 SSLMVEQELAAHRDVLECCVIARPHEKWGERGQAFVVLTEQAKASRGCAWMEEVKKGGSK 551
Query: 503 TTE---KDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
+ +++ ++C+ RI + VP+ +D LPKT+TGKVQK VL
Sbjct: 552 ENKAFVEELKKHCKERISGFAVPEWFDIVDALPKTSTGKVQKNVL 596
>gi|330835544|ref|YP_004410272.1| AMP-dependent synthetase and ligase [Metallosphaera cuprina Ar-4]
gi|329567683|gb|AEB95788.1| AMP-dependent synthetase and ligase [Metallosphaera cuprina Ar-4]
Length = 524
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 192/535 (35%), Positives = 297/535 (55%), Gaps = 26/535 (4%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPN 73
LTPL F+ER D +++Y + ++ Y+ + A+SL G+ VS+I+ N
Sbjct: 2 LTPLVFLERMRKYFKDKTALVYKEKRLSYQDFYKDVMIQANSLLKLGLQREGKVSIISSN 61
Query: 74 IPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFP 133
P EL+++VP + + IN +L + I+ I+ HSES++V V+ + L E+
Sbjct: 62 RPEFLELYYSVPYANGVLVPINPKLSPKEIAYIINHSESEVVIVEESFLANLAEIRK--- 118
Query: 134 PHSKTPKLVLITDDKE-ISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPM 192
KLVLI +++ I++ S+ V T++ L G + K + +
Sbjct: 119 --EIKAKLVLIENNENPIANESAKKD-------VTTFKEFLGLGSFSEIPIPVKEEYSLI 169
Query: 193 VLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAA 252
+ YT GTT PKGV+ ++ F+ AV ++ + SV LWTL MFH W F W
Sbjct: 170 GIYYTSGTTGLPKGVMLHHRGAFLNAVMEALEHQLDLNSVYLWTLNMFHAAAWGFAWATV 229
Query: 253 VVGATNVCLRKFDAPTVFALIRKHGVTHMCGAP-IVLNLLSSSPEAK-QLDRPVRILTAG 310
VGATNV L K + TV+ +IR V+HM G P + ++L++ E + +R + ++ AG
Sbjct: 230 AVGATNVYLDKVEPKTVYDVIRNERVSHMSGPPALFIDLVNYMKENDLKFNRKIHMIVAG 289
Query: 311 SPPPAPVLLRT-ESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRT 369
SPP APV LRT + LG + H YG TE G + C WK +WN LP E+A LK+RQGV
Sbjct: 290 SPP-APVTLRTVQELGGYMCHVYGLTETYGPHSICEWKEEWNSLPIGEQAKLKSRQGVPY 348
Query: 370 IGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVG 429
+G E+D++DP V RDG+T GE+VMRG ++ LGY KDP+ T + + G +++GD
Sbjct: 349 VGF-EMDVLDPHDE-PVPRDGRTIGEVVMRGNNVALGYYKDPKRTEESFRGGWFHSGDAA 406
Query: 430 MMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAF 489
++HPDGY+E+ DR KD+I + +SS +E L P V AV G P+ +++
Sbjct: 407 VVHPDGYVEVIDRFKDLIFTPEGRVSSVLVEKTLMEIPGVKRVAVYGIPEEKGEKVVARI 466
Query: 490 VSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
+ + G+ T ++I +C++ + + PK V F D +P T+TGKVQKY+L
Sbjct: 467 ETQE------GVKLTPSEVIDFCKSILAEFECPKVVEF-DRIPMTSTGKVQKYLL 514
>gi|373856948|ref|ZP_09599691.1| AMP-dependent synthetase and ligase [Bacillus sp. 1NLA3E]
gi|372453194|gb|EHP26662.1| AMP-dependent synthetase and ligase [Bacillus sp. 1NLA3E]
Length = 532
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 206/545 (37%), Positives = 282/545 (51%), Gaps = 39/545 (7%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
+ PL F++RA + P+II ++ +T+ + R QL+ L FG+ G V+ +
Sbjct: 2 NVPLVLTQFLDRAVSLYGPKPAIISDERVFTYEELNSRVNQLSHGLREFGVQKGDRVAYL 61
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL----- 125
APN M E + V GAI +N RL IL HSESK++FVD SL+
Sbjct: 62 APNSAEMLEGFYGVFQLGAIMVPLNIRLKPDDYLFILNHSESKILFVDEDLYSLIKPIKD 121
Query: 126 -LEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
L V H K + D +S+ S P + D
Sbjct: 122 KLTTVEAIVVHYKEKDTPELDYDAWLSNQSELPFKREVLD-------------------- 161
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
+ D L YT GTT PKGV+ ++ +I A+ S+ V Q VLL LPMFH NG
Sbjct: 162 ---EDDVCSLLYTSGTTGNPKGVMLTHRNNYIHALTSMHHLRVSDQDVLLHVLPMFHVNG 218
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK--QLDR 302
W + GAT VC RK A T+FA ++KH V+ M AP VLN L E Q+D+
Sbjct: 219 WGSPFYYTANGATQVCSRKTTAETIFAALQKHKVSIMHMAPTVLNSLLQFYEKNVPQIDQ 278
Query: 303 PVRILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
VR++ AGS PP + R E LG+ YG TE + ++ + LP +++ +
Sbjct: 279 AVRVVIAGSAPPPAFITRVEKELGWEFIQVYGMTESSPLSTVSTIRSHLKDLPVKDQYRM 338
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KA+ G IG EV IV+ E G V DG+ GE+V+R +MLGY K+ E T K +++G
Sbjct: 339 KAKAGHSMIG-CEVKIVN-EDGEEVAHDGKEIGEVVIRSNGVMLGYWKNEEETMKTIRNG 396
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
YTGD+G + G ++I DR KDVIISGGENISS E+E VLY HP + EAAV+ P
Sbjct: 397 YLYTGDMGNVDEYGNIDIVDRKKDVIISGGENISSIEVEGVLYEHPSIVEAAVIAVPHEK 456
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P AFV L+ T TE++II + R ++ + V F+ ELPKTA+GK+QK
Sbjct: 457 WGETPHAFVVLRENTS-----LTEQEIIAFSREKLAHFKAVTGVTFVTELPKTASGKIQK 511
Query: 542 YVLGD 546
L D
Sbjct: 512 VHLRD 516
>gi|239826217|ref|YP_002948841.1| AMP-dependent synthetase and ligase [Geobacillus sp. WCH70]
gi|239806510|gb|ACS23575.1| AMP-dependent synthetase and ligase [Geobacillus sp. WCH70]
Length = 530
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 202/535 (37%), Positives = 286/535 (53%), Gaps = 29/535 (5%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
S PL F++RA + D ++I + T T+ Q R QL+ L G+ G V+ +
Sbjct: 2 SVPLVLTQFLDRAVSLYGDKTAMICSGRTLTYKQLNERVNQLSHGLKQLGVEKGDRVAYL 61
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVS 130
APN M E + V GAI +NTRL IL HSESK++FVD L ++
Sbjct: 62 APNTLEMLEGFYGVFQLGAIMVPLNTRLRPEDYLFILNHSESKVLFVD----QDLYHFIA 117
Query: 131 LFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDL- 189
+T K +++ E D +D YE LA+ P S+ RP D
Sbjct: 118 PIKDKLQTVKTIIVHQKNE------------ETDEID-YEEWLAQ-HPSTSFDRPDIDEN 163
Query: 190 DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249
D L YT GTT PKGV+ ++ ++ A+ S+ V Q L LPMFH NGW +
Sbjct: 164 DVCSLLYTSGTTGNPKGVMLTHRNNYLHALISMHHLRVSDQDTYLHILPMFHVNGWGAPF 223
Query: 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDRPVRIL 307
GAT + LRK D +F I+ + V+ M AP VLN+L + + +D PVR++
Sbjct: 224 YYTANGATQIGLRKVDPKVIFDYIQTYKVSVMHMAPTVLNMLLQYYDEHKPVIDHPVRVV 283
Query: 308 TAGSPPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
AGS PP + R E LG+ YG TE + +N + LP ++ LKA+ G
Sbjct: 284 IAGSAPPPSFVTRVEQDLGWEFIQVYGMTESSPLNTISTIRSHLRDLPLEKQYRLKAKAG 343
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
IG EV +V+ E G V DG+T GE+++R ++M GY K+PEAT + +++G YTG
Sbjct: 344 YPMIG-CEVKVVN-EYGDEVPHDGKTIGEVIIRSNNVMKGYWKNPEATMEAIRNGWLYTG 401
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+G + GY++I DR KD+IISGGENISS E+E VLY HP V EAAV+ P W E P
Sbjct: 402 DMGTVDEYGYIDIVDRKKDIIISGGENISSIEVEGVLYEHPAVLEAAVIAAPHEKWGETP 461
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
AFV ++ G + TE+++I + R ++ + V F+D LPKTA+GK+QK
Sbjct: 462 HAFVVVRPGHE-----VTEEELIAFSREKLAHFKAITGVTFVDALPKTASGKIQK 511
>gi|389751492|gb|EIM92565.1| acetyl-CoA synthetase-like protein [Stereum hirsutum FP-91666 SS1]
Length = 986
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 212/581 (36%), Positives = 296/581 (50%), Gaps = 64/581 (11%)
Query: 8 PANSCPLTPLGFIERAATACDDCPSIIYNDTT----YTWSQTYRRCLQLASSLSSFGINP 63
P N PL PLGF+ RAA D +I + D YT+S +R A L G+ P
Sbjct: 432 PINIHPLNPLGFLLRAAQIYPDKLAIAHPDVADPVFYTYSVWAQRVQNFAYGLIEGGVRP 491
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+APN P + + V + AI TINTRL ++ IL+HS S+++FVDH +
Sbjct: 492 GDRVAVVAPNSPMIADALQGVIGARAIATTINTRLTKPEVAYILEHSGSRIIFVDHEYAH 551
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG---DPQF 180
L+ ++++ K+ + P YE+ L+ G +
Sbjct: 552 LV---------QGAKARIIIC---KDTGRAGCP------------YEDFLSSGRRFSKER 587
Query: 181 SWVRPKSDLD---PMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
W + D D P+ LNYT GTT PKGV+ + ++ A+ ++++ + S LW L
Sbjct: 588 GWAGLEMDADENKPLSLNYTSGTTGRPKGVLTTLRGSYLAAMANVMESQMNIDSTYLWIL 647
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKH----GVTHMCGAPIVLNLLSS 293
PMFH GW+F W AT + LR D ++LI KH VTH CGAP V + +
Sbjct: 648 PMFHAAGWTFPWAITCAFATQITLRTVD----YSLIWKHFLHSKVTHYCGAPTVQIGIVN 703
Query: 294 SPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKL 353
P+A++L + V + AG+ P A +L E G H YG T+ G +P W L
Sbjct: 704 HPDARRLPQTVTAVIAGAAPTAHLLGELEQKGIQPVHVYGLTQTYGPFTRNYPQPHWPSL 763
Query: 354 PARERASLKARQG--------VRTIGLTEVDIVDPETG-----------LSVKRDGQTRG 394
P ERA L ARQG +R + L+ D E + V +DG+T G
Sbjct: 764 PLSERAKLAARQGHTFTTSHPLRVVYLSSDLPSDTEPHKHPHQHPHGALVDVPKDGKTIG 823
Query: 395 EIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENI 454
EIVMRG M GY D EAT + K G ++TGD+ + H DG + I+DRSKD+IISGGEN
Sbjct: 824 EIVMRGNIAMHGYFMDEEATKRAFKGGWFHTGDLAVWHEDGSIAIQDRSKDIIISGGENA 883
Query: 455 SSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTD---SGGMMTTEKDIIQY 511
SS IE L SHP V E +VVGR P W E P AFV L SG +++ ++
Sbjct: 884 SSLAIEQELASHPDVLEVSVVGREHPKWGERPMAFVLLHAEPAKQWSGRHHHFAEELKKH 943
Query: 512 CRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMS 552
R R+P + P+ VV +DELPKT+TGK+ K L A +++
Sbjct: 944 ARERLPGFATPEWVVVVDELPKTSTGKILKTTLRKRAATLA 984
>gi|392597255|gb|EIW86577.1| acetyl-CoA synthetase-like protein [Coniophora puteana RWD-64-598
SS2]
Length = 568
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 204/555 (36%), Positives = 280/555 (50%), Gaps = 45/555 (8%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYR----RCLQLASSLSSFGINPGH 65
N L PL FI RAAT D ++++ D Y T+R R LA +L GINPG
Sbjct: 32 NHHALNPLSFILRAATVYPDRIALLHPDVKYPVQYTFRVWAQRIQNLAYALIEAGINPGD 91
Query: 66 VVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL 125
V+VIAPN P + + H V + AIF INTRL ++ IL+HS +KL+ VD + L+
Sbjct: 92 RVAVIAPNCPMIADAHHGVLGARAIFTPINTRLTPPEVAYILEHSGAKLILVDQECTHLI 151
Query: 126 LEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRP 185
T ++++D D YE LA G +FS R
Sbjct: 152 ----------RGTTIPTIVSNDTGRDD--------------DPYEAFLASGR-RFSRERG 186
Query: 186 KSDLD-------PMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
LD VLNYT GTT PKGV+ + ++ AV ++++ + K+S LW LP
Sbjct: 187 WMGLDVERDEDAGAVLNYTSGTTGKPKGVLTTLRGSYLAAVGNVVEGQMNKESTYLWILP 246
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK 298
MFH GW++ W A V +R D ++ VTH C AP V + + P+A+
Sbjct: 247 MFHAAGWTYPWANVFACAKQVTIRSVDYNAIWRHFLHSRVTHYCAAPTVQIGIVNHPDAR 306
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
L +PV + AG+ P A ++ + E G H YG T+ G C + W+ L +R
Sbjct: 307 PLPQPVTAIIAGAAPTAQLIGQLEQQGIKPVHVYGLTQTYGPFTRCYDQDSWSSLSLEDR 366
Query: 359 ASLKARQGVRTIGLTEVDIVDP------ETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPE 412
A L ARQG EV +V P + + V RDG T GEIV RG +M Y +DP+
Sbjct: 367 AKLMARQGQSFATAQEVRVVYPPRHDNDQELIDVPRDGNTVGEIVTRGNIVMKEYFRDPD 426
Query: 413 ATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEA 472
AT K + G + +GD+ +M+PDG + I DRSKD+IISGGEN SS IE L +HP V E
Sbjct: 427 ATKKAFRGGYFNSGDLAVMYPDGVVAIMDRSKDLIISGGENASSLAIEQELAAHPDVLEV 486
Query: 473 AVVGRPDPFWQEIPCAFVSLKTGTDS---GGMMTTEKDIIQYCRARIPRYMVPKTVVFID 529
+VV R W E P AF L S G D+ ++ R R+P + P+ V +
Sbjct: 487 SVVARAHEKWGERPMAFAILHPERSSKWEGNHDAFVADLKKHARTRLPGFATPEWVEVVQ 546
Query: 530 ELPKTATGKVQKYVL 544
ELPKT+TGK+ K L
Sbjct: 547 ELPKTSTGKILKTAL 561
>gi|312112088|ref|YP_003990404.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y4.1MC1]
gi|423720974|ref|ZP_17695156.1| long-chain-fatty-acid--CoA ligase, AMP-dependent [Geobacillus
thermoglucosidans TNO-09.020]
gi|311217189|gb|ADP75793.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y4.1MC1]
gi|383366327|gb|EID43618.1| long-chain-fatty-acid--CoA ligase, AMP-dependent [Geobacillus
thermoglucosidans TNO-09.020]
Length = 530
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 199/535 (37%), Positives = 290/535 (54%), Gaps = 29/535 (5%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
+ PL F++RA + D ++I + T T+ Q R +L+ L G+ G V+ +
Sbjct: 2 NVPLILTQFLDRAVSLYGDKTAMICSGRTLTYKQLNERVNRLSHGLKQLGVEKGDRVAYL 61
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVS 130
APN M E + V GAI +NTRL IL HSESK++FVD L++ +
Sbjct: 62 APNTLEMLEGFYGVFQLGAIMVPLNTRLKPDDYLFILNHSESKVLFVDQDLYHLIVPIKE 121
Query: 131 LFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDL- 189
+T K +++ E ++ + Y+ LA+ P + RP D
Sbjct: 122 KL----QTIKTIIVHQKDEETNEIA-------------YDEWLAQ-HPNTPFDRPDIDEN 163
Query: 190 DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249
D L YT GTT PKGV+ ++ ++ A+ S+ V + L LPMFH NGW +
Sbjct: 164 DVCSLLYTSGTTGNPKGVMLTHRNNYLHALISMHHLRVSDEDTYLHILPMFHVNGWGSPF 223
Query: 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDRPVRIL 307
GAT + LRK DA +F I+ + V+ M AP VLN+L + + +D PVR++
Sbjct: 224 YYTANGATQIGLRKVDAKVIFDYIQTYKVSVMHMAPTVLNMLLQYYDKHKPVIDHPVRVV 283
Query: 308 TAGSPPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
AGS PP + R E LG+ YG TE + +N+ + LP ++ LKA+ G
Sbjct: 284 IAGSAPPPSFVTRVEQDLGWEFIQVYGMTESSPLNLVSQIRSHLRDLPQEKQYRLKAKAG 343
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
IG +V +VD E G V DG+T GE+V+R ++M GY K+PEAT + +++G YTG
Sbjct: 344 YPMIG-CDVRVVD-EHGDEVPHDGKTIGELVIRSNNVMKGYWKNPEATMETIRNGWLYTG 401
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+G + GY++I DR KD+IISGGENISS E+E VLY HP V EAAV+ P W E P
Sbjct: 402 DMGTVDEYGYIDIVDRKKDIIISGGENISSIEVEGVLYEHPAVLEAAVIAAPHEKWGETP 461
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
AFV ++TG + TE+++I + R ++ + V F+DELPKTA+GK+QK
Sbjct: 462 HAFVVVRTGHE-----VTEEELIAFSREKLAHFKAITGVTFVDELPKTASGKIQK 511
>gi|71010373|ref|XP_758382.1| hypothetical protein UM02235.1 [Ustilago maydis 521]
gi|46098124|gb|EAK83357.1| hypothetical protein UM02235.1 [Ustilago maydis 521]
Length = 602
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 199/577 (34%), Positives = 296/577 (51%), Gaps = 45/577 (7%)
Query: 6 PN-PANSCPLTPLGFIERAATACDDCPSIIYNDTTY--TWSQTYRRCLQLASSLSSF-GI 61
PN P + LTP+ F+ RAA +I + + Y T+ Q RCL LA L S G
Sbjct: 25 PNAPHHRSSLTPVAFLLRAALIAPRKLAIAHPERGYSFTYEQWAARCLSLAFGLLSVPGF 84
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
G V+VI+PN P + + H+++P +G I IN R + ++ +L+HS S ++ DH
Sbjct: 85 KTGDRVAVISPNAPLIADAHWSIPAAGGIITPINIRNTPKEVAYVLEHSGSTIILCDH-- 142
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADF----------VDTYEN 171
E L P + V+I+ D +S R + ++ Y
Sbjct: 143 -----EFTHLVPENPGNRVTVIISRDSGGQDASDDYERFLDRGWQEWQRAEQAELEKYRA 197
Query: 172 MLAKG-DPQFSW---VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVV 227
+G +P+ W P + P+ L YT GTT PKGV+ ++ ++ AV + + +
Sbjct: 198 RSKRGAEPKTGWKLLCAPHDEEQPIALCYTSGTTGRPKGVLTNHRGAYLAAVANAFEANI 257
Query: 228 PKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIV 287
++SV LW LPMFH GW++ W AT+ +RK D ++ + H ++H CGAP V
Sbjct: 258 TQESVYLWVLPMFHACGWTYPWAVTASLATHHTIRKVDNAVIWHALVNHNISHYCGAPTV 317
Query: 288 LNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWK 347
L + P A++L+R V + A S P A +L + ESL H YG TE G ++
Sbjct: 318 QIGLVNHPAARKLERRVNVAVAASAPTANLLAKMESLNLHPVHVYGLTETYGPFTRRYFE 377
Query: 348 PKWNKLPARERASLKARQGVRTIGLTEVDIVDPETG--------LSVKRDGQTRGEIVMR 399
P+W KL RA + ARQG + EV +V E+ + V+R+GQ GEIV+R
Sbjct: 378 PEWAKLDVDSRARMMARQGHSYLTSDEVRVVRTESSTDSSSDDLIDVQRNGQETGEIVIR 437
Query: 400 GGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEI 459
G +M+GY D AT+K + G ++TGD+ + HP G ++I DR KD+IISGGENISS +
Sbjct: 438 GNMVMIGYYNDTAATNKAIIKGWFHTGDLAVRHPGGEIQILDRGKDIIISGGENISSLMV 497
Query: 460 ESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSL------KTGTDSGGMMTTEKD------ 507
E L +H V E V+ RP W E AFV L K D + ++
Sbjct: 498 EQELAAHTDVLECCVIARPHEKWGERGQAFVVLTEQAKAKRNIDEIKKHGSHENRAFIQS 557
Query: 508 IIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
+ ++C+ R+ + VP+ +DELPKT+TGKVQK VL
Sbjct: 558 LKKHCKDRMSGFAVPEWFDIVDELPKTSTGKVQKNVL 594
>gi|443894677|dbj|GAC72024.1| acyl-coa synthetase [Pseudozyma antarctica T-34]
Length = 602
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 201/580 (34%), Positives = 290/580 (50%), Gaps = 68/580 (11%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTTY--TWSQTYRRCLQLASSLSSF-GINPGHVVSVI 70
LTP+ F+ RAA +I + + Y T+ Q R L LA +L + G G V+VI
Sbjct: 34 LTPVSFLLRAALITPRKLAITHPERGYGFTYEQWAARTLSLAFALRAVPGFKTGDRVAVI 93
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVS 130
+PN P + + H+ +P +G I IN R + ++ +L+HS S ++ DH E
Sbjct: 94 SPNAPLIADAHYGIPAAGGIITPINIRNTPKEVAYVLEHSGSTIILADH-------EFKH 146
Query: 131 LFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG-------------- 176
L P + V+I+ D + D YE L +G
Sbjct: 147 LVPENPGPGITVVISKDSGGQEAD------------DAYEQFLDRGWVEWQRAEKAQIDQ 194
Query: 177 ---------DPQFSWV---RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLID 224
+P+ W P+ + P+ L YT GTT PKGV+ ++ ++ AV + +
Sbjct: 195 HRQSSKPTAEPKTGWKLIDAPQDEEQPIALCYTSGTTGRPKGVLTNHRGAYLAAVANAFE 254
Query: 225 WVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGA 284
+ + SV LW LPMFH GW+F W AT+ +RK D ++ + HGVTH CGA
Sbjct: 255 ANITQDSVYLWVLPMFHACGWTFPWAVTASLATHHTIRKVDNRVIWDALVNHGVTHYCGA 314
Query: 285 PIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSC 344
P V L++ P+A++LDR V + A S P A +L + ESL H YG TE G
Sbjct: 315 PTVQIGLTNHPDARKLDRRVNVAVAASAPTANLLAKMESLNLYPVHVYGLTETYGPFTRR 374
Query: 345 AWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETG--------LSVKRDGQTRGEI 396
++P+W KL RA + ARQG + EV +V E+ + V RDG+ GEI
Sbjct: 375 YFEPEWAKLDVDARARMMARQGHSYLTSDEVRVVRTESSNDKTTSDLIDVARDGKETGEI 434
Query: 397 VMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISS 456
V+RG M+GY D AT K + G ++TGD+ + HP G ++I DR KD+IISGGENISS
Sbjct: 435 VVRGNMTMIGYYNDQAATDKAVMKGWFHTGDLAVRHPGGEIQILDRGKDIIISGGENISS 494
Query: 457 TEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSL----KTGTDSGGMMTT-EKDIIQY 511
+E L +H V E V+ RP W E AFV L K D+ + K+ +++
Sbjct: 495 LMVEQELAAHADVLECCVIARPHEKWGERGQAFVVLTEQAKAKLDAEALKRKGSKENVEF 554
Query: 512 -------CRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
C+ R+ + VP+ +DELPKT+TGKVQK VL
Sbjct: 555 VELLKKHCKERMSGFAVPEWFDIVDELPKTSTGKVQKNVL 594
>gi|55377030|ref|YP_134880.1| medium-chain acyl-CoA ligase [Haloarcula marismortui ATCC 43049]
gi|55229755|gb|AAV45174.1| medium-chain acyl-CoA ligase [Haloarcula marismortui ATCC 43049]
Length = 533
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 206/540 (38%), Positives = 286/540 (52%), Gaps = 45/540 (8%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
FI+RAA DD I+ +D T YT+++ R QLA +LS G++ G V+++APN
Sbjct: 10 FIDRAADIYDDVTGIVAHDGTEYTYAEVNERVNQLAHALSDRGVSKGSRVALLAPNTHYF 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E +A GA+F +N RLD I IL E+ V D+ + + P
Sbjct: 70 IETLYATNKLGAVFVPLNYRLDPAKIEYILNDCEAATVIADYDFAE------KVQPVRDD 123
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SDLDPMVLNY 196
P I P RI + Y +L G P RP+ ++ D +NY
Sbjct: 124 IPAETFI---------GYEPDRIDGE--WEAYSGIL-DGQPTAEPDRPEMAEDDDASINY 171
Query: 197 TWGTTSAPKGVVQCYK--AFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVV 254
T GTT PKGVV+ ++ ++ + ++ ++ + LWTLPMFH NGW T+
Sbjct: 172 TSGTTGDPKGVVRTHRTESWHSLVLNQHME--IRDDDTYLWTLPMFHCNGWGHTYAITGT 229
Query: 255 GATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK------QLDRPVRILT 308
G T+VC R FDA F +R++ V+ MCGAP VLN L A Q DR VRI T
Sbjct: 230 GGTHVCQRTFDAADTFRRVREYDVSFMCGAPTVLNKLIQHYRANDGDVVTQGDRDVRIAT 289
Query: 309 AGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AGS P + R E G+ + H YG TE A + ++ + P+ ++ R R LK +QG
Sbjct: 290 AGSAPATATIERVEDEFGWRIIHIYGLTETAPI-ITTSNSPR--RIAERGR-ELKVKQGS 345
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYY 424
T+ T++ IVD E G V RDG T GE+V++G +M YL PE T + D G ++
Sbjct: 346 ETL-CTDIRIVD-EDGTDVPRDGATIGEVVVQGNQVMDRYLNKPEITEEAFNDRAEGYFH 403
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
TGD+ DG ++I DR KD+IISGGENISS E+E LY HP V +AAV+ P W E
Sbjct: 404 TGDLAAWDEDGMIQIMDRRKDIIISGGENISSIELEDELYDHPGVLKAAVIPTPSEDWGE 463
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P A V +D+ TE+DI+++ R R+ Y VP + F D LP+TATGK+QKY L
Sbjct: 464 TPMAIVVPTADSDA-----TEQDILEFLRERVASYKVPAGIDFRDSLPETATGKIQKYEL 518
>gi|448678675|ref|ZP_21689682.1| medium-chain acyl-CoA ligase [Haloarcula argentinensis DSM 12282]
gi|445772662|gb|EMA23707.1| medium-chain acyl-CoA ligase [Haloarcula argentinensis DSM 12282]
Length = 533
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 207/540 (38%), Positives = 284/540 (52%), Gaps = 45/540 (8%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
FI+RAA DD I+ +D T YT+++ R QLA +LS G++ G V+V+APN
Sbjct: 10 FIDRAADIYDDVTGIVAHDGTEYTYAEVNERVNQLAHALSDRGVSKGSRVAVLAPNTHYF 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E +A GA+F +N RLD I IL E+ V D+ + + P
Sbjct: 70 IETLYATNKLGAVFVPLNYRLDPAKIEYILNDCEAATVIADYDFAE------KVQPVRDD 123
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SDLDPMVLNY 196
P I P RI D Y ++L G P RP ++ D +NY
Sbjct: 124 IPAETFI---------GYKPNRIDGE--WDAYSDVL-DGQPTAEPDRPDMTEDDDASINY 171
Query: 197 TWGTTSAPKGVVQCYK--AFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVV 254
T GTT PKGVV+ ++ ++ + ++ ++ + LWTLPMFH NGW T+
Sbjct: 172 TSGTTGDPKGVVRTHRTESWHSLVLNQHME--IRDDDTYLWTLPMFHCNGWGHTYAITGT 229
Query: 255 GATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK------QLDRPVRILT 308
G T+VC R FDA F +R++ V+ MCGAP VLN L A Q DR VRI T
Sbjct: 230 GGTHVCQRTFDAADTFRRVREYDVSFMCGAPTVLNKLIQHYRANDGDVVTQGDRDVRIAT 289
Query: 309 AGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AGS P + R E G+ + H YG TE A + ++ + P+ ++ R R LK +QG
Sbjct: 290 AGSAPATATIERVEDEFGWRIIHIYGLTETAPI-ITTSNSPR--RIAERGR-ELKVKQGS 345
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYY 424
+ T++ +VD E G V DG T GEIV++G +M YL PE T + D G ++
Sbjct: 346 EAL-CTDIRVVD-EDGDDVPHDGATIGEIVVQGNQVMDRYLNKPEITEEAFNDRVEGYFH 403
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
TGD+ DG ++I DR KD+IISGGENISS E+E LY HP V +AAV+ P W E
Sbjct: 404 TGDLATWDDDGMIQIMDRRKDIIISGGENISSIELEDELYDHPDVLKAAVIPAPSEDWGE 463
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P A V G+D+ TE+DI+ + R R+ Y VP + F D LP+TATGK+QKY L
Sbjct: 464 TPMAIVVPTAGSDA-----TEQDILDFLRERVASYKVPAGIDFRDSLPETATGKIQKYEL 518
>gi|336236473|ref|YP_004589089.1| o-succinylbenzoate--CoA ligase [Geobacillus thermoglucosidasius
C56-YS93]
gi|335363328|gb|AEH49008.1| o-succinylbenzoate--CoA ligase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 530
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 198/535 (37%), Positives = 289/535 (54%), Gaps = 29/535 (5%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
+ PL F++RA + D ++I + T T+ Q R +L+ L G+ G V+ +
Sbjct: 2 NVPLILTQFLDRAVSLYGDKTAMICSGRTLTYKQLNERVNRLSHGLKQLGVEKGDRVAYL 61
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVS 130
APN M E + V GAI +NTRL IL HSESK++FVD L++ +
Sbjct: 62 APNTLEMLEGFYGVFQLGAIMVPLNTRLKPDDYLFILNHSESKVLFVDQDLYHLIVPIKE 121
Query: 131 LFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDL- 189
+T K +++ E ++ + Y+ LA+ P + RP D
Sbjct: 122 KL----QTIKTIIVHQKDEETNEIA-------------YDEWLAQ-HPNTPFDRPDIDEN 163
Query: 190 DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249
D L YT GTT PKGV+ ++ ++ A+ S+ V + L LPMFH NGW +
Sbjct: 164 DVCSLLYTSGTTGNPKGVMLTHRNNYLHALISMHHLRVSDEDTYLHILPMFHVNGWGSPF 223
Query: 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDRPVRIL 307
GAT + LRK DA +F I+ + V+ M AP VLN+L + + +D PVR++
Sbjct: 224 YYTANGATQIGLRKVDAKVIFDYIQTYKVSVMHMAPTVLNMLLQYYDKHKPVIDHPVRVV 283
Query: 308 TAGSPPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
AGS PP + R E LG+ YG TE + +N+ + LP ++ LKA+ G
Sbjct: 284 IAGSAPPPSFVTRVEQDLGWEFIQVYGMTESSPLNLVSQIRSHLRDLPREKQYRLKAKAG 343
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
IG +V +VD E G V DG+T GE+V+R ++M GY K+PEAT + +++G YTG
Sbjct: 344 YPMIG-CDVRVVD-EHGDEVPHDGKTIGELVIRSNNVMKGYWKNPEATMETIRNGWLYTG 401
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+G + GY++I DR KD+IISGGENISS E+E VLY HP V EAAV+ P W E P
Sbjct: 402 DMGTVDEYGYIDIVDRKKDIIISGGENISSIEVEGVLYEHPAVLEAAVIAAPHEKWGETP 461
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
AFV ++ G + TE+++I + R ++ + V F+DELPKTA+GK+QK
Sbjct: 462 HAFVVVRPGHE-----VTEEELIAFSREKLAHFKAITGVTFVDELPKTASGKIQK 511
>gi|448651270|ref|ZP_21680339.1| medium-chain acyl-CoA ligase [Haloarcula californiae ATCC 33799]
gi|445770797|gb|EMA21855.1| medium-chain acyl-CoA ligase [Haloarcula californiae ATCC 33799]
Length = 533
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 207/540 (38%), Positives = 288/540 (53%), Gaps = 45/540 (8%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
FI+RAA DD I+ +D T YT+++ R QLA +LS G++ G V+++APN
Sbjct: 10 FIDRAADIYDDVTGIVAHDGTEYTYAEVNERVNQLAHALSDRGVSKGSRVALLAPNTHYF 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E +A GA+F +N RLD I IL E+ V D+ + + P
Sbjct: 70 IETLYATNKLGAVFVPLNYRLDPAKIEYILNDCEAATVIADYDFAE------KVQPVRDD 123
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SDLDPMVLNY 196
P I P RI D+ + Y ++L G P RP ++ D +NY
Sbjct: 124 IPAETFI---------GYEPDRID-GDW-EGYGDVL-DGQPTAEPDRPDMTEDDDASINY 171
Query: 197 TWGTTSAPKGVVQCYK--AFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVV 254
T GTT PKGVV+ ++ ++ + ++ ++ + LWTLPMFH NGW T+
Sbjct: 172 TSGTTGDPKGVVRTHRTESWHSLVLNQHME--IRDDDTYLWTLPMFHCNGWGHTYAITGT 229
Query: 255 GATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK------QLDRPVRILT 308
G T+VC R FDA F +R++ V+ MCGAP VLN L A Q DR VRI T
Sbjct: 230 GGTHVCQRTFDAADTFRRVREYDVSFMCGAPTVLNKLIQHYRANDGDVVTQGDRDVRIAT 289
Query: 309 AGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AGS P + R E G+ + H YG TE A + ++ + P+ ++ R R LK +QG
Sbjct: 290 AGSAPATATIERVEDEFGWRIIHIYGLTETAPI-ITTSNSPR--RIAERGR-ELKVKQGS 345
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYY 424
T+ T++ IVD E G V RDG T GE+V++G +M YL PE T + D G ++
Sbjct: 346 ETL-CTDIRIVD-EDGTDVPRDGATIGEVVVQGNQVMDRYLNKPEITEEAFNDRAEGYFH 403
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
TGD+ DG ++I DR KD+IISGGENISS E+E LY HP V +AAV+ P W E
Sbjct: 404 TGDLAAWDEDGMIQIMDRRKDIIISGGENISSIELEDELYDHPGVLKAAVIPTPSEDWGE 463
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P A V +D+ TE+DI+++ R R+ Y VP + F D LP+TATGK+QKY L
Sbjct: 464 TPMAIVVPTADSDA-----TEQDILEFLRERVASYKVPAGIDFRDSLPETATGKIQKYEL 518
>gi|451997947|gb|EMD90412.1| hypothetical protein COCHEDRAFT_1105220 [Cochliobolus
heterostrophus C5]
Length = 587
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 194/555 (34%), Positives = 296/555 (53%), Gaps = 29/555 (5%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTT-----YTWSQTYRRCLQLASSLSSFGINPG 64
N L+P F+ RAA D +I + ++++ R LA L G
Sbjct: 40 NFHTLSPTWFLWRAAQIEPDALAIYHKTANNQILRRSYAEAADRARGLAYYLKKHGYKR- 98
Query: 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V ++A N PA E F + +GA+ IN RL IS I +HS+ ++ D
Sbjct: 99 --VGILATNTPAFLESIFGIAAAGAVNVAINYRLKPDDISYIFQHSDVDMIIAD------ 150
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV- 183
E VSL + K V + D ++ ++ ++ + + +G + +
Sbjct: 151 -AEFVSLLDDYKKAKPDVPVLVDTDMDATEGELSGPFDDAVLEGLKYDIEQGGKGWESLE 209
Query: 184 -RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQS---VLLWTLPM 239
K++ D + L YT GTT+ PKGV ++ ++ A+ ++I+ + S LWTLPM
Sbjct: 210 SHAKNEEDVIALAYTSGTTARPKGVEYTHRGVYLAAMGNIIESGLNYHSGRAKYLWTLPM 269
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH GW+F W V T+ CLRK D P ++ L+++ G+TH AP V LL ++ EA++
Sbjct: 270 FHATGWTFPWSVTAVRGTHYCLRKIDYPEIWRLLKEEGITHFNAAPTVNTLLCAAKEAER 329
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L +PVR+ A SPP A + + +L H YG TE G P+W+ LP +E+
Sbjct: 330 LPKPVRVTVAASPPSAWLFEQMSNLNLSPVHVYGLTETYGPITKGYHVPEWDTLPDKEKY 389
Query: 360 SLKARQGVRTIGLTEVDIVDPE--TGL--SVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
+ ARQG I + ++ PE G+ +V+++GQ GEI+ +G GY KD EAT
Sbjct: 390 NRMARQGHGFIVAKALRVIKPEQPAGVLTNVEQNGQEIGEIIFQGNICAKGYYKDAEATR 449
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
K + G +TGD+ + HPDG ++I DR+KD+IISGGENISS +E++L +HP + E V
Sbjct: 450 KLWEGGWLHTGDLAVWHPDGAIQILDRAKDIIISGGENISSVALEAMLSTHPAILEVGVC 509
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPK 533
PD W E P AFV+ K G++S T ++IQ+ + + I R+MVP+ VV + ELPK
Sbjct: 510 AVPDSHWGERPKAFVTTKDGSNSA---TLGAEVIQWAKENSHISRFMVPREVVVVSELPK 566
Query: 534 TATGKVQKYVLGDIA 548
T+TGK+QK VL + A
Sbjct: 567 TSTGKIQKNVLREWA 581
>gi|330912859|ref|XP_003296095.1| hypothetical protein PTT_04844 [Pyrenophora teres f. teres 0-1]
gi|311332023|gb|EFQ95805.1| hypothetical protein PTT_04844 [Pyrenophora teres f. teres 0-1]
Length = 587
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 194/555 (34%), Positives = 295/555 (53%), Gaps = 29/555 (5%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTT-----YTWSQTYRRCLQLASSLSSFGINPG 64
N L+P F+ RAA D +I + ++++ R LA L G
Sbjct: 40 NFHTLSPTWFLWRAAQIEPDATAIYHKTANNKILRRSYAEAADRARGLAYYLRRHGYKR- 98
Query: 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V ++A N PA E FA+ +GA+ IN RL IS I +HS+ ++ D
Sbjct: 99 --VGILATNTPAFLESIFAIAAAGAVNVAINYRLKHDDISYIFQHSDVDMIIAD------ 150
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV- 183
E V L + K V I D + ++ ++ ++ + +G ++ +
Sbjct: 151 -AEFVHLLDDYRKERPTVPILVDTDTDATEGELSGPFDDAVLEGLKHDIEQGGKGWADLE 209
Query: 184 -RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVV---PKQSVLLWTLPM 239
+ K++ D + L YT GTT+ PKGV ++ ++ A+ ++I+ + ++ LWTLPM
Sbjct: 210 SQAKNEEDVIALAYTSGTTARPKGVEYTHRGVYLAALGNVIESGLNYHTGRAKYLWTLPM 269
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH GW+F W V T+ CLRK D P ++ L+++ G+TH AP V LL ++ EA++
Sbjct: 270 FHATGWTFPWSVTAVRGTHYCLRKIDYPEIWRLLKEEGITHFNAAPTVNTLLCAAKEAER 329
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L +PVR+ A SPP A + + +L H YG TE G P+W+ LP +ER
Sbjct: 330 LPQPVRVTVAASPPSAWLFEQMSNLNLHPVHVYGLTETYGPITKGYHMPEWDTLPIKERY 389
Query: 360 SLKARQGVRTIGLTEVDIVDPETG----LSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
ARQG I ++ E ++V+++GQ GEI+ G GY KD EAT
Sbjct: 390 DRMARQGHGFITGKATRVIKTEQAPGVLINVEKNGQEIGEIIFEGNICAKGYYKDAEATR 449
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
K + G +TGD+ + HPDG ++I DR+KD+IISGGENISS +E++L +HP + E V
Sbjct: 450 KLWEGGWLHTGDLAVWHPDGAIKILDRAKDIIISGGENISSVALEAMLSTHPSILEVGVC 509
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPK 533
PD W E P AFV+ K GT+S T +++IQ+ + + I R+MVP+ VV + ELPK
Sbjct: 510 AVPDSHWGERPKAFVTTKDGTNS---ETLGQEVIQWAKENSAISRFMVPREVVVVKELPK 566
Query: 534 TATGKVQKYVLGDIA 548
T+TGK+QK VL + A
Sbjct: 567 TSTGKIQKNVLREWA 581
>gi|336366059|gb|EGN94407.1| hypothetical protein SERLA73DRAFT_188276 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378731|gb|EGO19888.1| hypothetical protein SERLADRAFT_478339 [Serpula lacrymans var.
lacrymans S7.9]
Length = 590
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 208/585 (35%), Positives = 287/585 (49%), Gaps = 66/585 (11%)
Query: 8 PANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYR----RCLQLASSLSSFGINP 63
P + PL P FI RAAT D ++ + D Y TYR R LA +L GI P
Sbjct: 31 PTHLHPLNPFPFILRAATVYPDKLALAHPDVEYPTFFTYRIWAQRIQNLAYALIEAGIQP 90
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+APN P + + H+ + + AI INTRL ++ IL+HS SKL+ +D
Sbjct: 91 GDRVAVLAPNSPMIADAHYGILAARAIITPINTRLTPPEVAYILEHSGSKLLLIDR---G 147
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS-- 181
L+ V L P ++ D I D YE+ L+ G +FS
Sbjct: 148 LMQLVQGLKIP------FIVNNDTGRIG---------------DPYEDFLSAGR-RFSAE 185
Query: 182 --WVRPKSDLDP---MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLW- 235
W +LD VL YT GTT PKGV+ + ++ A+ ++++ + K S LW
Sbjct: 186 KGWAGLDVELDEGAGAVLCYTSGTTGRPKGVLTTLRGSYLAAIANVVEGQISKDSTYLWW 245
Query: 236 --------------------TLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRK 275
LPMFH GW+F W AT + +R D ++
Sbjct: 246 ASSLAYPHPLSEGNVLLNNRILPMFHAAGWTFPWANVFAFATQITMRTVDYSQIWKHFLN 305
Query: 276 HGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKT 335
GVTH CGAP V + ++P A+ L R + + AG+ P A ++ E G H YG T
Sbjct: 306 SGVTHYCGAPTVQIGIVNNPAARPLPRSISAIIAGAAPTAHLIGELEKKGIQPVHVYGLT 365
Query: 336 EIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIV------DPETGLSVKRD 389
G C +P W L ERA L ARQG EV +V D + + V +D
Sbjct: 366 YTYGPFTRCYDQPSWALLSLEERAKLMARQGQSFATAQEVRVVYPPKSEDDQEVVDVPKD 425
Query: 390 GQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIIS 449
G+T GE+ RG +M Y +DPEAT K + G +++GD+ +MHPDG + I DRSKD+IIS
Sbjct: 426 GKTVGEVATRGNIVMKEYFRDPEATRKAFRGGYFHSGDLAVMHPDGVIAIMDRSKDIIIS 485
Query: 450 GGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDS---GGMMTTEK 506
GGEN SS IE L SHP V E +VV R W E P AFV+L+ S G
Sbjct: 486 GGENASSLAIEQELASHPHVLEVSVVARSHVKWGERPMAFVTLRQEHVSAWKGKHNVFGD 545
Query: 507 DIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSM 551
++ +Y R R+P + P+ V ++ELPKT+TGK+ K L IA +
Sbjct: 546 ELKRYARTRLPGFACPEWVEVVEELPKTSTGKILKTNLRTIAAKL 590
>gi|448640820|ref|ZP_21677607.1| medium-chain acyl-CoA ligase [Haloarcula sinaiiensis ATCC 33800]
gi|445761345|gb|EMA12593.1| medium-chain acyl-CoA ligase [Haloarcula sinaiiensis ATCC 33800]
Length = 533
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 205/540 (37%), Positives = 285/540 (52%), Gaps = 45/540 (8%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
FI+RAA DD I+ +D T YT+++ R +LA +LS G++ G V+++APN
Sbjct: 10 FIDRAADIYDDVTGIVAHDGTEYTYAEVNERVNRLAHALSDRGVSKGSRVALLAPNTHYF 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E +A GA+F +N RLD I IL E+ V D+ + + P
Sbjct: 70 IETLYATNKLGAVFVPLNYRLDPAKIEYILNDCEAATVIADYDFAE------KVQPVRDD 123
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SDLDPMVLNY 196
P I P RI + Y +L G P RP ++ D +NY
Sbjct: 124 IPAETFI---------GYEPDRIDGE--WEAYSGIL-DGQPTAEPDRPDMTEDDDASINY 171
Query: 197 TWGTTSAPKGVVQCYK--AFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVV 254
T GTT PKGVV+ ++ ++ + ++ ++ + LWTLPMFH NGW T+
Sbjct: 172 TSGTTGDPKGVVRTHRTESWHSLVLNQHME--IRDDDTYLWTLPMFHCNGWGHTYAITGT 229
Query: 255 GATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK------QLDRPVRILT 308
G T+VC R FDA F +R++ V+ MCGAP VLN L A Q DR VRI T
Sbjct: 230 GGTHVCQRTFDAADTFRRVREYDVSFMCGAPTVLNKLIQHYRANDGDVVTQGDRDVRIAT 289
Query: 309 AGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AGS P + R E G+ + H YG TE A + ++ + P+ ++ R R LK +QG
Sbjct: 290 AGSAPATATIERVEDEFGWRIIHIYGLTETAPI-ITTSNSPR--RIAERGR-ELKVKQGS 345
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYY 424
T+ T++ IVD E G V RDG T GE+V++G +M YL PE T + D G ++
Sbjct: 346 ETL-CTDIRIVD-EDGTDVPRDGATIGEVVVQGNQVMDRYLNKPEITEEAFNDRAEGYFH 403
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
TGD+ DG ++I DR KD+IISGGENISS E+E LY HP V +AAV+ P W E
Sbjct: 404 TGDLAAWDEDGMIQIMDRRKDIIISGGENISSIELEDELYDHPGVLKAAVIPTPSEDWGE 463
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P A V +D+ TE+DI+++ R R+ Y VP + F D LP+TATGK+QKY L
Sbjct: 464 TPMAIVVPTADSDA-----TEQDILEFLRERVASYKVPAGIDFRDSLPETATGKIQKYEL 518
>gi|440640147|gb|ELR10066.1| hypothetical protein GMDG_04467 [Geomyces destructans 20631-21]
Length = 576
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 195/550 (35%), Positives = 283/550 (51%), Gaps = 30/550 (5%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHV-V 67
N+ L+P F+ERAA D +I + +TY+ + + + + + V
Sbjct: 29 NNHELSPTFFLERAAQIEPDAEAIHHTTANNVVLRRTYQEFADRSRGFAYYLVKKQYKRV 88
Query: 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLE 127
++ PN PA E F + +GA+ +N RL + I+ I H+E +++ VD LL
Sbjct: 89 GILCPNTPAFLESIFGIGAAGAVNVGVNYRLKSEDIAYIFNHAEVEVIIVDAEYLHLLDR 148
Query: 128 VVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKS 187
L+P + P ++ TD + S P A + G+ W KS
Sbjct: 149 FKELYP---QIP-FIIDTDTDAVEEISGP---FDAAVLEGLSYDKETGGN---GWAGLKS 198
Query: 188 DLD----PMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSV---LLWTLPMF 240
D + L YT GTT+ PKGVV ++ ++ A+ ++++ + + LWTLPMF
Sbjct: 199 QCDDEQATIALAYTSGTTAKPKGVVYNHRGAYLAALANVVESGLNYHTGRCGYLWTLPMF 258
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H GW+F W V T+ C+RK D P ++ L++ VTH AP V LL +SPEA++L
Sbjct: 259 HAMGWTFPWAVTAVRGTHYCMRKIDYPAIWHLLKTENVTHFNAAPTVNTLLCASPEAERL 318
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
++PVR+ A SPP A + ESL + H YG TE G P W LP E+
Sbjct: 319 EKPVRVTVAASPPTAHLFKTMESLNLMPVHVYGLTETYGPITKGYRMPAWENLPENEKYD 378
Query: 361 LKARQGVRTIGLTEVDIVDPETG----LSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
ARQG I ++ E + VK+DG+ GEIV G Y KDPEAT K
Sbjct: 379 KMARQGHGAITTLPCRVIKTEQAPGIIVDVKKDGKEIGEIVFLGNICAKEYYKDPEATRK 438
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
G ++GD+ + H DG ++I DR+KD+IISGGENISS +E +L HP V EA VV
Sbjct: 439 IFDGGVLHSGDLAVWHADGAIQILDRAKDIIISGGENISSVSLEGMLVQHPDVLEAGVVA 498
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRAR--IPRYMVPKTVVFIDELPKT 534
PD W E P AFV+++ G G D+IQ+ + + I ++MVP+ V + ELPKT
Sbjct: 499 VPDSHWGERPKAFVTVQQGKTLKG-----DDVIQWAKHKSDISKFMVPREVEIVAELPKT 553
Query: 535 ATGKVQKYVL 544
+TGKV+K VL
Sbjct: 554 STGKVKKNVL 563
>gi|448630449|ref|ZP_21673104.1| medium-chain acyl-CoA ligase [Haloarcula vallismortis ATCC 29715]
gi|445756372|gb|EMA07747.1| medium-chain acyl-CoA ligase [Haloarcula vallismortis ATCC 29715]
Length = 533
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 205/540 (37%), Positives = 285/540 (52%), Gaps = 45/540 (8%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
FI+RAA DD I+ +D T YT+++ R QLA +LS G++ G V+++APN
Sbjct: 10 FIDRAADIYDDVTGIVAHDGTEYTYAEVNERVNQLAHALSDRGVSEGSRVALLAPNTHYF 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E +A GA+F +N RLD I IL E+ V D+ + + P
Sbjct: 70 IETLYATNKLGAVFVPLNYRLDPAKIEYILNDCEASTVIADYDFAE------KVQPVRDD 123
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SDLDPMVLNY 196
P I P RI D Y ++L G P RP+ ++ D +NY
Sbjct: 124 IPAETFI---------GYKPDRIDGE--WDAYSDIL-DGQPTAEPDRPQVAEGDDASINY 171
Query: 197 TWGTTSAPKGVVQCYK--AFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVV 254
T GTT PKGVV+ ++ ++ + ++ ++ + LWTLPMFH NGW T+
Sbjct: 172 TSGTTGDPKGVVRTHRTESWHALVLNQHME--IRDDDTYLWTLPMFHCNGWGHTYAITGT 229
Query: 255 GATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK------QLDRPVRILT 308
G T+VC R FDA F +R++ V+ MCGAP VLN L A Q DR VRI T
Sbjct: 230 GGTHVCQRTFDAADTFRRVREYDVSFMCGAPTVLNKLIQHYRANDGDIVTQGDRDVRIAT 289
Query: 309 AGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AGS P + R E G+ + H YG TE A + ++ + P+ ++ R R LK +QG
Sbjct: 290 AGSAPATATIERVEDEFGWRIIHIYGLTETAPI-ITTSNSPR--RIAERGR-ELKVKQGS 345
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYY 424
T+ T++ +VD E G V DG GEIV++G +M YL PE T + D G ++
Sbjct: 346 ETL-CTDIRVVD-EDGNDVPHDGSAIGEIVVQGNQVMDRYLNKPEITEEAFNDRVEGYFH 403
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
TGD+ DG ++I DR KD+IISGGENISS E+E LY HP V +AAV+ P W E
Sbjct: 404 TGDLATWDEDGMVQIMDRRKDIIISGGENISSIELEDELYDHPDVLKAAVIPAPSEDWGE 463
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P A V +D+ TE++I+++ R R+ Y VP V F D LP+TATGK+QKY L
Sbjct: 464 TPMAIVVPTADSDA-----TEQEILEFLRERLASYKVPTGVDFRDSLPETATGKIQKYEL 518
>gi|449456943|ref|XP_004146208.1| PREDICTED: probable acyl-activating enzyme 1, peroxisomal-like
[Cucumis sativus]
gi|449533036|ref|XP_004173483.1| PREDICTED: probable acyl-activating enzyme 1, peroxisomal-like
[Cucumis sativus]
Length = 470
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 185/488 (37%), Positives = 283/488 (57%), Gaps = 48/488 (9%)
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+APNIP +YELHFAVPM+GAI + +NT+LD+ T+S++L+ K++F+D +LL+
Sbjct: 1 MAPNIPELYELHFAVPMAGAIISALNTKLDSPTLSLLLQQLNPKVIFIDSQFLPILLK-- 58
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIP-PADFVDTYENMLAK--GDPQFSWVRPK 186
SL K P LVLI D P P P++F+D Y +LA GD F+ RP
Sbjct: 59 SLENSSIKFPALVLIPSD----------PDTPLPSEFLD-YNKVLAMRFGDDDFT-PRPN 106
Query: 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQS---VLLWTLPMFHNN 243
++LDP+ +NYT G+T KGV+ ++A ++ ++ ++ + + V LWT+ MF N
Sbjct: 107 AELDPISINYTSGSTGLHKGVIYSHRAAYLNSLATIFRSKICSSTSSPVFLWTVDMFRCN 166
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA----KQ 299
GW F W A +G N+CLR A +F + H VT +CG P +L ++ S ++
Sbjct: 167 GWCFIWVMAALGGCNICLRTVTADAIFTNVELHRVTLLCGPPTLLKMIYESSSNNCMPRR 226
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L R V ++ AG+ P +L + LGF +S+GYG TE G + WKP + E
Sbjct: 227 LSRRVDLIVAGALPIKEILTKVNELGFNISYGYGMTEAMGPAIIRPWKPTF------EED 280
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC-M 418
+++ + ++ E+D+ DP + SV DG+T GE+++RG +LM GY K+ +AT + +
Sbjct: 281 NVQFEDLITSL---EIDVKDPISMESVLGDGETLGEVMLRGNTLMSGYYKNMKATHEAFI 337
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVII--SGGENISSTEIESVLYSHPMVNEAAVVG 476
+ Y TGDVG+ H G +E+KDR+KD+++ G +S+ E+E VL SHP V EAAVVG
Sbjct: 338 GENWYRTGDVGVRHKSGRIEMKDRAKDIVVRTDGEGAVSTVEVEGVLMSHPNVAEAAVVG 397
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
+ FV LK + G +I+++CR +P +M+PK +VF D LP +T
Sbjct: 398 ERTLY------GFVKLKNRSKENG-----DEIVEFCRMHLPEFMIPKRIVFGD-LPMNST 445
Query: 537 GKVQKYVL 544
GKVQK+ L
Sbjct: 446 GKVQKFAL 453
>gi|390604099|gb|EIN13490.1| acetyl-CoA synthetase-like protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 550
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 198/551 (35%), Positives = 283/551 (51%), Gaps = 30/551 (5%)
Query: 15 TPLGFIERAATACDDCPSIIYNDTT----YTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
PL F+ +AA D +I + D Y++ +R LA +L GI PG V+VI
Sbjct: 13 NPLAFVLKAAQIYPDKLAIAHPDVEQPVFYSYGVWAQRIQNLAYALKHRGIQPGDRVAVI 72
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVS 130
APN P + + H A + I INTRL +S IL+HS ++L+ +D LL
Sbjct: 73 APNCPLIADAHQATLAARCIITPINTRLTRPEVSYILQHSGARLILIDREYLHLLDG--- 129
Query: 131 LFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLD 190
P + V+++ D + P +F+ E A G+ + + ++D D
Sbjct: 130 --PEGNPLGAQVVVSHDSGRAGD-------PYEEFLK--EGRRASGERGWPGLEVETDED 178
Query: 191 P-MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249
L YT GTT PKGV+ + ++ A+ + + + S LW LPMFH +GW++ W
Sbjct: 179 AGAALCYTSGTTGRPKGVLTTLRGSYLAAIANAFETRMNIDSTYLWILPMFHASGWTYPW 238
Query: 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTA 309
A AT + +R P ++ GVTH CGAP V + + P A++L P+ + A
Sbjct: 239 AATFAMATQLTIRTVSYPLIWKHFLHSGVTHYCGAPTVQIGIVNDPAARRLREPISAIVA 298
Query: 310 GSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRT 369
GS P A ++ L H YG TE G ++P+W L +RA ARQG +
Sbjct: 299 GSAPTAHLIGELTKLHINPVHVYGMTETYGPFTRNYFQPEWAALSLEDRAKFMARQGHQF 358
Query: 370 IGLTEVDIVDP--------ETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
EV +V P + + V +DG+T GEIV RG M Y +DPEAT K + G
Sbjct: 359 ATALEVRVVYPPAEGSSLDDALVDVPKDGKTVGEIVTRGNITMKEYFRDPEATRKAFRGG 418
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+ +GD+ +MHPDG + I DRSKD+IISGGEN SS IE L +HP V E AVV RP P
Sbjct: 419 CFNSGDLAVMHPDGSIAILDRSKDIIISGGENASSLAIEQELSTHPHVLEVAVVARPHPK 478
Query: 482 WQEIPCAFVSLK---TGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
W E AFV+LK T G E ++ ++ R+R+P + P+ V + ELPKT+TGK
Sbjct: 479 WGERAMAFVTLKPDHVKTWLGKHDQFEVELKKHARSRLPGFACPEWVRVVSELPKTSTGK 538
Query: 539 VQKYVLGDIAN 549
+QK VL + A
Sbjct: 539 IQKMVLRNKAK 549
>gi|298704733|emb|CBJ28329.1| acyl-CoA synthase [Ectocarpus siliculosus]
Length = 546
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 198/544 (36%), Positives = 283/544 (52%), Gaps = 50/544 (9%)
Query: 9 ANSCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINPGHVV 67
AN+ L+P+ +++RAA D ++ Y +D + T+S+ QLAS++S G+ PG VV
Sbjct: 27 ANNARLSPVPYLQRAAMLNPDKTAVKYGDDISLTYSELMTETRQLASAVSRAGVLPGQVV 86
Query: 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLE 127
SV+ PN+P HFA+P GA + INTRLDAR ++ L+H+ESKL+ VD + + +
Sbjct: 87 SVLVPNVPVAITCHFAIPGMGATLHMINTRLDARAVAFQLEHAESKLLIVDCELAGIAKD 146
Query: 128 VVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKS 187
+ + SK P L+ D S++ + DF+ T GDP F +
Sbjct: 147 ALEMIEDESKRPHLIQAEDPMHAEWSATDGEEL--RDFMRT-------GDPNFELPGAEH 197
Query: 188 DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDW-VVPKQSVLLWTLPMFHNNGWS 246
+ D + L+YT GTT PKGV+ ++ + ++ I W +V LWTLPMFH NGW
Sbjct: 198 EDDAIALSYTSGTTGNPKGVLTHHRGAALNSMSVSITWPLVGGDVKYLWTLPMFHCNGWC 257
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRI 306
W V N+ L G T AP+ + R +++
Sbjct: 258 LPWAITAV-VMNLLL---------------GATEEEKAPVT---------ERMPPRVIQM 292
Query: 307 LTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
+T G+ PP V+ E LG YG TE+ G S W W+ L ER AR
Sbjct: 293 MTGGAAPPPSVMRELEQELGIRPLSAYGLTEVYGPCTSNLWDDSWDDLEEDERG---ARL 349
Query: 366 GVRTIGLTEVDIVDPETGL-SVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYY 424
+ L V + G +V DG T GE+++RG ++M GYL + EAT + G+++
Sbjct: 350 PWQAPSLVHEMYVAEKGGFDAVPADGVTLGEVLLRGNAVMKGYLNNEEATKEAFDQGQWF 409
Query: 425 -TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQ 483
TGD+ + HP G +EIKDR KD+IISGGENISS E+E+ L+ H V AVV PDPFW
Sbjct: 410 RTGDMAVQHPGGRVEIKDREKDIIISGGENISSIEVETALHQHEGVLHVAVVALPDPFWG 469
Query: 484 EIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPK---TVVFIDELPKTATGKVQ 540
E P A + K G G +DII + R+ + ++ PK V ELPKTATGK+Q
Sbjct: 470 ETPVAVIEAKPGAKVSG-----EDIISHARSILAKFKCPKCPIKDVIFRELPKTATGKIQ 524
Query: 541 KYVL 544
K+VL
Sbjct: 525 KHVL 528
>gi|389817164|ref|ZP_10207946.1| AMP-binding protein [Planococcus antarcticus DSM 14505]
gi|388464740|gb|EIM07068.1| AMP-binding protein [Planococcus antarcticus DSM 14505]
Length = 470
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/479 (37%), Positives = 260/479 (54%), Gaps = 25/479 (5%)
Query: 73 NIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLF 132
N M E + + GA+ +N RL A+ + I+ HS +K + VD L+ E+
Sbjct: 4 NTHYMLECFYGISQMGAVMVLLNYRLTAKDLEYIINHSGAKTLIVDAEFGKLIEEIQDKL 63
Query: 133 PPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPM 192
K +++ E+ S + DF+ + D +F + D + M
Sbjct: 64 L----IEKYIMV----EMDGHDSKLNGVSYEDFI--------QQDSKFVLPEVRIDENQM 107
Query: 193 V-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGA 251
+ LNYT GTTS PKGV+ +++ ++ A + L V V L TLPMFH NGW W
Sbjct: 108 LTLNYTSGTTSNPKGVMLTHRSNYLNAANFLYHLKVVHDDVYLHTLPMFHANGWGGVWAI 167
Query: 252 AVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD---RPVRILT 308
G T+VCLRK D + L H ++ +CGAP V+N+L + P+AK + P
Sbjct: 168 TAAGGTHVCLRKVDPSLILDLFETHKISILCGAPTVVNMLVNEPKAKTIHITTNPRMGTA 227
Query: 309 AGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVR 368
P A + E LG + H YG TE + + WK +++ E+A++KARQG+
Sbjct: 228 GAPPAAALIGKAQELLGLNMMHVYGLTETSPFILYNEWKKEFDDKTPDEQATIKARQGIE 287
Query: 369 TIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDV 428
E +V+ E G V +GQ GEI+ RG +M GY KDPE T++ +KDG +YTGD+
Sbjct: 288 LAFNGETKVVNQEDGKEVAWNGQELGEIITRGNVVMSGYYKDPEKTAEAIKDGWFYTGDL 347
Query: 429 GMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCA 488
+ +PDGY+EI+DR KD+IISGGENISSTEIE +LY HP V E AV+ PD W E+P A
Sbjct: 348 AVTYPDGYIEIQDRIKDMIISGGENISSTEIEGILYKHPDVMEVAVIAVPDEKWGEVPKA 407
Query: 489 FVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDI 547
+ L+ G TE +II Y + + PK++ F++ LPKTATGK+QK+ L ++
Sbjct: 408 IIVLQPGA-----TVTELEIISYTCDNMAHFKAPKSIEFVEALPKTATGKLQKFRLREM 461
>gi|189188536|ref|XP_001930607.1| long-chain-fatty-acid-CoA ligase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972213|gb|EDU39712.1| long-chain-fatty-acid-CoA ligase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 588
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 193/555 (34%), Positives = 291/555 (52%), Gaps = 29/555 (5%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTT-----YTWSQTYRRCLQLASSLSSFGINPG 64
N L+P F+ RAA D +I + ++++ R LA L G
Sbjct: 40 NFHTLSPTWFLWRAAQIEPDATAIYHRTANNQILRRSYAEAADRARGLAYYLRKHGYKR- 98
Query: 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V ++A N PA E FA+ +GA+ IN RL IS I +HS+ ++ D
Sbjct: 99 --VGILATNTPAFLESIFAIAAAGAVNVAINYRLKHDDISYIFQHSDVDMIIAD------ 150
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV- 183
E V L + K V I D + ++ ++ + + +G ++ +
Sbjct: 151 -TEFVGLLDDYRKERPHVPILVDTDTDATEGELSGPFDDAVLEGLKYDIEQGGNGWAHLE 209
Query: 184 -RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVV---PKQSVLLWTLPM 239
+ K + + L YT GTT+ PKGV ++ ++ A+ ++I+ + ++ LWTLPM
Sbjct: 210 SQAKDEEHVIALAYTSGTTARPKGVEYTHRGVYLAAMGNVIESGLNYHTGRAKYLWTLPM 269
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH GW+F W V T+ CLRK D P ++ L+++ G+TH AP V LL ++ EA++
Sbjct: 270 FHATGWTFPWSVTAVRGTHYCLRKIDYPEIWRLLKEEGITHFNAAPTVNTLLCAAKEAER 329
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L +PVR+ A SPP A + + L H YG TE G P+W+KLP +E+
Sbjct: 330 LPQPVRVTVAASPPSAWLFEQMSDLNLHPVHVYGLTETYGPITKGYHMPEWDKLPIKEKY 389
Query: 360 SLKARQGVRTIGLTEVDIVDPETG----LSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
ARQG I ++ E + V+++GQ GEI+ G GY KD EAT
Sbjct: 390 DRMARQGHGFITGKATRVIKTEQAPGVLIDVEKNGQEIGEIIFEGNICAKGYYKDAEATR 449
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
K + G +TGD+ + HPDG ++I DR+KD+IISGGENISS +E++L +HP + E V
Sbjct: 450 KLWEGGWLHTGDLAVWHPDGAIKILDRAKDIIISGGENISSVALEAMLSTHPSILEVGVC 509
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPK 533
PD W E P AFV+ K GT+S T +++IQ+ + + I R+MVP+ VV + ELPK
Sbjct: 510 AVPDSHWGERPKAFVTTKDGTNS---ETLGQEVIQWAKENSAISRFMVPREVVVVKELPK 566
Query: 534 TATGKVQKYVLGDIA 548
T+TGK+QK VL + A
Sbjct: 567 TSTGKIQKNVLREWA 581
>gi|448667493|ref|ZP_21685993.1| medium-chain acyl-CoA ligase [Haloarcula amylolytica JCM 13557]
gi|445770061|gb|EMA21129.1| medium-chain acyl-CoA ligase [Haloarcula amylolytica JCM 13557]
Length = 533
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 205/540 (37%), Positives = 284/540 (52%), Gaps = 45/540 (8%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
FI+RAA DD I+ +D T YT+++ R +LA +LS G++ G V+V+APN
Sbjct: 10 FIDRAADIYDDVTGIVAHDGTEYTYAEVNERVNRLAHALSDRGVSKGSRVAVLAPNTHYF 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E +A GA+F +N RLD I IL E+ V D+ + + P
Sbjct: 70 IETLYATNKLGAVFVPLNYRLDPAKIEYILNDCEAATVIADYDFAE------KVQPVRDD 123
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SDLDPMVLNY 196
P I P RI + Y +L G P RP ++ D +NY
Sbjct: 124 IPAETFI---------GYEPDRIDGE--WEAYSGIL-DGQPTAEPDRPDMAEDDDASINY 171
Query: 197 TWGTTSAPKGVVQCYK--AFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVV 254
T GTT PKGVV+ ++ ++ + ++ ++ + LWTLPMFH NGW T+
Sbjct: 172 TSGTTGDPKGVVRTHRTESWHALVLNQHME--IRDDDTYLWTLPMFHCNGWGHTYAITGT 229
Query: 255 GATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK------QLDRPVRILT 308
G T+VC R FDA F +R++ V+ MCGAP VLN L A Q DR VRI T
Sbjct: 230 GGTHVCQRTFDAADTFRRVREYDVSFMCGAPTVLNKLIQHYRAHDGDVVTQGDREVRIAT 289
Query: 309 AGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AGS P + R E G+ + H YG TE A + ++ + P+ ++ R R LK QG
Sbjct: 290 AGSAPATATIERVEDEFGWRIIHIYGLTETAPI-ITTSNSPR--RIAERGR-ELKVTQGS 345
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYY 424
+ + T++ +VD E G V RDG T GEIV++G +M YL PE T + D G ++
Sbjct: 346 QVL-CTDIRVVD-EDGNDVPRDGTTIGEIVVQGNQVMDRYLNKPEITEEAFNDRVEGYFH 403
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
TGD+ DG ++I DR KD+IISGGENISS E+E LY HP V +AAV+ P W E
Sbjct: 404 TGDLATWDEDGMVQIMDRRKDIIISGGENISSIELEDELYDHPDVLKAAVIPAPSEDWGE 463
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P A V +D+ TE+DI+++ R R+ Y VP + F D LP+TATGK+QKY L
Sbjct: 464 TPMAIVVPTADSDA-----TEQDILEFLRERVASYKVPAGIDFRDSLPETATGKIQKYEL 518
>gi|380495598|emb|CCF32273.1| AMP-binding enzyme [Colletotrichum higginsianum]
Length = 574
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 208/564 (36%), Positives = 290/564 (51%), Gaps = 39/564 (6%)
Query: 5 KPNPA-NSCPLTPLGFIERAATACDDCPSIIY---NDTTY--TWSQTYRRCLQLASSLSS 58
+P P N L+P F+ERAA D +I + N T ++ + R LA L
Sbjct: 25 EPQPTHNVHQLSPTFFLERAAAIEPDAEAIFHITANGRTLRRSYIEFADRARGLAYYLKK 84
Query: 59 FGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD 118
G V ++APN PA E F + +G + +N RL I+ I +E + VD
Sbjct: 85 HGFKR---VGILAPNTPAFLESIFGIAAAGGVNVGVNYRLKPDDITYIFDFAEVDSIIVD 141
Query: 119 HLSSSLLLEVVSLFPPHSKTPKLVLITD-DKEISSSSSPPPRIPPADFVDTYENMLAKGD 177
H SLL + +K P + LI D D + + P Y+ + KG
Sbjct: 142 HEFISLLDDF------RAKHPNVPLIVDTDTDATEGQLSGPFDDAVLEGLRYDGLHGKG- 194
Query: 178 PQFSWVRPKSDLDP----MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQS-- 231
W S D + + +T GTTS PKGVV ++ ++ AV ++I+ + +
Sbjct: 195 ----WAGLHSQCDNEDDMLAIPFTSGTTSRPKGVVYTHRGAYLAAVGNVIESGLNYHTGR 250
Query: 232 -VLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNL 290
LWTLPMFH GW+F W V T+VCLRK D P ++ L+++ GVTH AP V L
Sbjct: 251 CKYLWTLPMFHAVGWTFPWAVTAVRGTHVCLRKIDYPLIWKLLKEEGVTHFNAAPTVNTL 310
Query: 291 LSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKW 350
L S+ EA++L VR+ A SPP A + + +L H YG TE G P W
Sbjct: 311 LCSAKEAEKLPHEVRVTVAASPPSAHLFEQMTNLNLFPVHVYGLTETYGPITKGYHMPSW 370
Query: 351 NKLPARERASLKARQG---VRTIGLTEVDIVDPETGL-SVKRDGQTRGEIVMRGGSLMLG 406
LPA E+ + ARQG V ++ + V PE L V +DG+ GEIV G G
Sbjct: 371 ETLPASEKYAKMARQGHGFVTSLPIRIVKTDQPEGVLVDVAKDGKEIGEIVFLGNICAKG 430
Query: 407 YLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSH 466
Y KD EAT K G ++GD+ + HPDG +I DR+KD+IISGGENISS +E +L H
Sbjct: 431 YYKDAEATKKLFDRGALHSGDLAVHHPDGSAQILDRAKDIIISGGENISSVALEGMLIQH 490
Query: 467 PMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKT 524
P + EAAVV PD W E P A+V++K G G +D+I + R + I ++MVP+
Sbjct: 491 PDLMEAAVVAVPDSHWGERPKAYVTIKEGKSLEG-----EDLIAWARNQSNISKFMVPRE 545
Query: 525 VVFIDELPKTATGKVQKYVLGDIA 548
V +DELPKT+TGK++K VL + A
Sbjct: 546 VEVVDELPKTSTGKLKKNVLREWA 569
>gi|393218689|gb|EJD04177.1| acetyl-CoA synthetase-like protein [Fomitiporia mediterranea
MF3/22]
Length = 540
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 206/563 (36%), Positives = 279/563 (49%), Gaps = 43/563 (7%)
Query: 1 MDRLKPNPANSCPLTPLGFIERAATACDDCPSIIY----NDTTYTWSQTYRRCLQLASSL 56
M L P+ + S PL F+ R AT +I + N YT+S +R LA +L
Sbjct: 1 MSLLDPHDSIS---NPLAFVLRGATIYPHKLAIAHPDVENPVAYTYSVWAQRIQNLAYAL 57
Query: 57 SSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVF 116
GI PG V+VI+PN P + E V + AI INTRL + IL+HS SKL+
Sbjct: 58 IWSGIKPGDRVAVISPNTPMIAEAMHGVLAARAIITLINTRLTKSEVDYILQHSGSKLIL 117
Query: 117 VDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG 176
VDH + F +K P V+++ D F YE L+KG
Sbjct: 118 VDHEYTH--------FTKDAKVP--VIVSRDT--------------GRFGCPYEEFLSKG 153
Query: 177 ---DPQFSWVRPKSDLDP---MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQ 230
+ W + +LD VL YT GTT PKGV+ + ++ AV + + +
Sbjct: 154 RQHSNERGWPGLEMELDEDAGAVLCYTSGTTGRPKGVLTTLRGSYLGAVGNAYEARMTPD 213
Query: 231 SVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNL 290
SV LW LPMFH GW+F W A + R ++ GVTH CGAP V
Sbjct: 214 SVYLWVLPMFHAAGWTFPWSITFSFAAQITQRNVSNTHIWRHFLNSGVTHYCGAPTVQLG 273
Query: 291 LSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKW 350
+ + P+A +L++PV + AGS P A ++ E V H YG T G +P W
Sbjct: 274 IITHPDAIRLEKPVATIIAGSAPTAHLIGELEKKNIHVVHVYGLTYTYGPFTRGYAQPFW 333
Query: 351 NKLPARERASLKARQGVRTIGLTEVDIV---DPETGLSVKRDGQTRGEIVMRGGSLMLGY 407
L ERA ARQG EV +V D + V DG+T GE+V RG +M Y
Sbjct: 334 KDLSLEERAKFLARQGHAFATAQEVRVVYQDDSDELTDVPADGKTVGEVVTRGNIVMKEY 393
Query: 408 LKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHP 467
+DPEAT K + G + +GD+ +MH DG + I+DRSKD+IISGGEN SS IE L H
Sbjct: 394 FRDPEATKKAFRGGYFASGDLAVMHEDGSIAIQDRSKDIIISGGENASSLAIEQELAEHH 453
Query: 468 MVNEAAVVGRPDPFWQEIPCAFVSLKTGTD---SGGMMTTEKDIIQYCRARIPRYMVPKT 524
V+E AVV RP P W E P AFV L + +G E ++ ++ R+R+P + P+
Sbjct: 454 AVHEVAVVARPHPKWGERPMAFVILTPAAEKEYAGRHHDFEVELKKFARSRLPGFACPEW 513
Query: 525 VVFIDELPKTATGKVQKYVLGDI 547
V +DELPK +TGK+ K L I
Sbjct: 514 VRVVDELPKNSTGKIMKTALRGI 536
>gi|46125799|ref|XP_387453.1| hypothetical protein FG07277.1 [Gibberella zeae PH-1]
Length = 588
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 195/583 (33%), Positives = 303/583 (51%), Gaps = 44/583 (7%)
Query: 1 MDRLKPNPA---NSCPLTPLGFIERAATACDDCPSIIYNDTT-YTWSQTYRRCLQLASSL 56
+ L+P+PA N L+P F+ERAA D +I + ++Y A L
Sbjct: 12 LSHLRPHPAAPVNYHTLSPTTFLERAAAIEPDAEAIFHITVNGAVLRRSYAEFADRARGL 71
Query: 57 SSFGINPGHV-VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLV 115
+ + + G+ V V+APN PA E + + +GA+ N RL I+ I +E +
Sbjct: 72 AYYLLKHGYRRVGVLAPNTPAFLESIYGIVAAGAVIVPANYRLKQEDIAYIFDFAEVDCI 131
Query: 116 FVD-------------HLSSSLLLEVVSLFPPHSKT-------PKLVLITDDKEISSSSS 155
VD H + L++++V F PH + L +D + S
Sbjct: 132 IVDNEFVGLLDAYKEKHENVPLIVDMVD-FLPHEQAEACFKAVANLAYQDNDATVGQLSG 190
Query: 156 PPPRIPPADFVDTYENMLAKGDPQFSWV--RPKSDLDPMVLNYTWGTTSAPKGVVQCYKA 213
P ++ ++ +A+G ++ + + +S+ D + + +T GTTS PKGVV ++
Sbjct: 191 PFDDA----VLEGLKHDIAQGSQGWAGLHSQARSEDDMLAIPFTSGTTSKPKGVVYTHRG 246
Query: 214 FFIIAVDSLIDWVVP-KQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFAL 272
++ A+ ++++ + + LWTLPMFH GW+F W V TNVCLRK D P ++ L
Sbjct: 247 SYLAAMANIVESGLNIGRCKYLWTLPMFHAVGWTFPWAVVAVRGTNVCLRKIDYPLIWKL 306
Query: 273 IRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGY 332
+++ G+TH AP V LL ++ EA++L V++ A SPP + + L I H Y
Sbjct: 307 LKEEGITHFNAAPTVNTLLVAAKEAEKLPHEVKVTVAASPPTGYLFEQMTKLNLIPVHVY 366
Query: 333 GKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETG----LSVKR 388
G TE G + C P+W+ LP E+ + +RQG I + I+ P+ + V +
Sbjct: 367 GMTETYGPSTKCYTLPEWDSLPPTEKYAKMSRQGHGFITSLPIRIIKPDQPQGVLIDVAK 426
Query: 389 DGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVII 448
DG+ GEIV G Y KDP AT + G ++GD+ + HPDG +I+DR+KD+II
Sbjct: 427 DGKEIGEIVFMGNICAKEYYKDPAATRELFAGGVLHSGDLAVWHPDGSAQIQDRAKDIII 486
Query: 449 SGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDI 508
SGGENISS +ES+L HP + EA V PD W E P +V++K G G +I
Sbjct: 487 SGGENISSVALESMLAQHPDILEAGAVAVPDSHWGERPKVYVTVKDGKSVTG-----DEI 541
Query: 509 IQYCRAR--IPRYMVPKTVVFIDELPKTATGKVQKYVLGDIAN 549
IQ+ + + I R+MVP+ V +DELPKT+TGK++K VL + A
Sbjct: 542 IQWAKHQSDISRFMVPREVEIVDELPKTSTGKIKKNVLREWAK 584
>gi|402221849|gb|EJU01917.1| AMP-dependent synthetase and ligase [Dacryopinax sp. DJM-731 SS1]
Length = 572
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 198/558 (35%), Positives = 287/558 (51%), Gaps = 43/558 (7%)
Query: 5 KPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTY----RRCLQLASSLSSFG 60
K P PL P+ F+ RAA ++ + D Y S TY +R LA +L G
Sbjct: 33 KNQPVWHTPLDPVNFLLRAALIYPKKVALAHLDVPYPVSYTYDVWAQRIQNLAYALIESG 92
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
I PG V+VIAPN P M + H A+ + I +N RL I IL+HS +KL+ DH
Sbjct: 93 IKPGDRVAVIAPNCPMMADAHHAILAARGIITPLNYRLTKGEIQYILEHSGAKLILCDHE 152
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
+ LL P + P V+I+ D D YE+ LA+G +F
Sbjct: 153 FTHLL--------PENHAP--VIISQDT--------------GRVGDPYEDFLARGR-RF 187
Query: 181 SWVRPKSDL--DP-----MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVL 233
S R S L +P L YT GTT PKGV+ Y+ ++ AV + + + S+
Sbjct: 188 SQERGWSGLPIEPDENAGSCLCYTSGTTGRPKGVLTTYRGSYLAAVANAYETKMDLYSIY 247
Query: 234 LWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSS 293
LWTLPMFH GW++ W A+ V LR + ++ + ++H C AP V + +
Sbjct: 248 LWTLPMFHACGWTYPWAITFSFASQVTLRTVNYDLIWKNFKNSRISHYCAAPTVQIGIVN 307
Query: 294 SPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKL 353
+ A +++P+R + AG+ P A ++ E +G VSH YG TE G +P++ L
Sbjct: 308 ARHASYVEQPLRAIIAGAAPTAHLIGSLEKIGISVSHVYGLTETYGPFTISYDRPEYKTL 367
Query: 354 PARERASLKARQGVRTIGLTEVDIV----DPETGLSVKRDGQTRGEIVMRGGSLMLGYLK 409
ER+ ARQG E+ ++ D + + + +DG GEI RG +M Y +
Sbjct: 368 TVDERSVFFARQGHSFATADEIRVIQHDNDSKDLVDIPKDGVVLGEITARGNVVMKEYFR 427
Query: 410 DPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMV 469
DP+AT++ K G +++GD+ + HPDG + ++DRSKD+IISGGEN SS IE VL P V
Sbjct: 428 DPKATAEAFKGGYFHSGDLAIWHPDGSIAVQDRSKDLIISGGENASSLAIEQVLSKFPPV 487
Query: 470 NEAAVVGRPDPFWQEIPCAFVSLKT---GTDSGGMMTTEKDIIQYCRARIPRYMVPKTVV 526
EA VV RP W E P AFV L + G G E ++ ++ R +P + VP+ V
Sbjct: 488 LEATVVARPHEKWGERPMAFVILHSHEEGKWKGKDKEFEIELKKFARQSLPGFAVPEWVA 547
Query: 527 FIDELPKTATGKVQKYVL 544
+ ELPKT+TGK+QK +L
Sbjct: 548 IVKELPKTSTGKIQKNIL 565
>gi|302916055|ref|XP_003051838.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732777|gb|EEU46125.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 572
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 196/564 (34%), Positives = 299/564 (53%), Gaps = 28/564 (4%)
Query: 1 MDRLKPNPANS---CPLTPLGFIERAATACDDCPSIIYNDTT-YTWSQTYRRCLQLASSL 56
++ L+P+PA S L+P F+ERAA+ D +I + ++Y A L
Sbjct: 12 LNHLRPHPAASPSFHTLSPTTFLERAASIEPDAEAIFHITVNGAVLRRSYAEFADRARGL 71
Query: 57 SSFGINPGHV-VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLV 115
+ + + G+ V ++APN PA E + + +GA+ N RL IS I +E +
Sbjct: 72 AYYLLKHGYRRVGILAPNTPAFLESIYGIVAAGAVIVPANYRLKPDDISYIFDFAEVDCI 131
Query: 116 FVDHLSSSLLLEVVSLFPP-HSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLA 174
VD+ LL L+ H P +V + D P ++ ++ +
Sbjct: 132 VVDNEFVGLL----DLYKEKHQNVPFIVDLDTDATEGQLCGPFDEA----VLEGLKHDID 183
Query: 175 KGDPQFSWV--RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLID-WVVPKQS 231
+G ++ + + +S+ D + + +T GTTS PKGVV ++ ++ + ++I+ + +
Sbjct: 184 QGSQGWAGLHAQARSEDDMLAIPFTSGTTSRPKGVVYTHRGAYLATLANIIESGLNIGRC 243
Query: 232 VLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL 291
LWTLPMFH GW+F W V TNVCLRK D P ++ L+++ G+TH AP V LL
Sbjct: 244 KYLWTLPMFHAIGWTFPWSTVAVRGTNVCLRKVDYPLLWKLLKEEGITHFNAAPTVNTLL 303
Query: 292 SSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWN 351
++ EA++L R V++ A SPP + + +L I H YG TE G C P+W+
Sbjct: 304 VAAKEAERLPREVKVTVAASPPSGHLFEQMTNLNLIPVHVYGMTETYGPITKCYTLPEWD 363
Query: 352 KLPARERASLKARQGVRTIGLTEVDIVDPETG----LSVKRDGQTRGEIVMRGGSLMLGY 407
LP E+ + ARQG I + I+ P+ + V +DG+ GEIV G Y
Sbjct: 364 DLPPHEKYAKMARQGHGFITSLPIRIIKPDQPQGVLIDVAKDGKEIGEIVFLGNICAKEY 423
Query: 408 LKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHP 467
KDPEAT + G ++GD+ + HPDG +I DR+KD+IISGGENISS +ES+L HP
Sbjct: 424 YKDPEATRQLFAGGVLHSGDLAVWHPDGSAQILDRAKDIIISGGENISSVALESMLVEHP 483
Query: 468 MVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRAR--IPRYMVPKTV 525
V EA VV PD W E P A+V++K G T +II + + + I R+MVP+ V
Sbjct: 484 DVLEAGVVSVPDSHWGERPKAYVTVKEGK-----AVTGDEIISWAKHQSDISRFMVPREV 538
Query: 526 VFIDELPKTATGKVQKYVLGDIAN 549
++ELPKT+TGK++K VL + A
Sbjct: 539 EVVNELPKTSTGKIKKNVLREWAK 562
>gi|448236880|ref|YP_007400938.1| putative long-chain-fatty-acid--CoA ligase [Geobacillus sp. GHH01]
gi|445205722|gb|AGE21187.1| putative long-chain-fatty-acid--CoA ligase [Geobacillus sp. GHH01]
Length = 531
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 201/542 (37%), Positives = 285/542 (52%), Gaps = 42/542 (7%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
+ PL F +RA D ++I + T T+ + R +LA+ L G+ G V+ +
Sbjct: 2 NAPLVLHHFFDRAVALYGDKTAMICSGRTVTYRELGERVSRLANGLRGLGVRKGDRVAYL 61
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL----- 125
APN M E + V G + +NTRL IL HSE+K++FVD L+
Sbjct: 62 APNTLEMLEGFYGVFEVGGVMVPLNTRLKPDDYVFILNHSETKVLFVDQELYGLIAPVKN 121
Query: 126 -LEVVSLFPPHSKTPKLVLIT--DDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
LE V H KT + T D+ + SS+P PR P D EN
Sbjct: 122 KLETVEEIIVHHKTEAAIDETAYDEWLAAQSSAPVPR-PMID-----EN----------- 164
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
D L YT GTT PKGV+ ++ ++ A+ ++ V + L LPMFH
Sbjct: 165 -------DICSLLYTSGTTGNPKGVMLTHRNNYLHALVTMHHLRVSDRDTYLHVLPMFHV 217
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
NGW + GAT + LRK D +F L+++H VT M AP VLN+L E Q D
Sbjct: 218 NGWGAPFYYTANGATQIGLRKVDPKVIFDLVKEHQVTVMHMAPTVLNMLLQYYEQYQPDV 277
Query: 303 P--VRILTAGS-PPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
P VR++ AGS PPPA V E LG+ YG TE + ++ +P+ + LP ++
Sbjct: 278 PEGVRVVIAGSAPPPAFVARVEEKLGWEFIQVYGMTESSPLSTISLIRPQLDGLPVEQKQ 337
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+KA+ G IG EV +VD E G V +G+T GE+++R +M GY K+ EAT+ ++
Sbjct: 338 RIKAKAGYPMIG-CEVKVVD-ENGDEVPHNGRTIGEVIVRSHGVMKGYWKNEEATAATIR 395
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
DG YTGD+ + G+++I DR KD+IISGGENISS E+E LY HP V EAAV+ P
Sbjct: 396 DGWLYTGDMATVDEYGHIDIVDRKKDIIISGGENISSIEVEGALYEHPAVLEAAVIAAPH 455
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E P AFV ++ G + TE+++I + R ++ + V F+DELPKTA+GK+
Sbjct: 456 EKWGETPHAFVVVRPGHN-----VTEEELIAFSREKLAHFKAITGVTFVDELPKTASGKI 510
Query: 540 QK 541
QK
Sbjct: 511 QK 512
>gi|344211141|ref|YP_004795461.1| medium-chain acyl-CoA ligase [Haloarcula hispanica ATCC 33960]
gi|343782496|gb|AEM56473.1| medium-chain acyl-CoA ligase [Haloarcula hispanica ATCC 33960]
Length = 533
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 202/540 (37%), Positives = 282/540 (52%), Gaps = 45/540 (8%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
FI+RAA DD I+ +D T YT+++ +R +LA +LS G++ G V+V+APN
Sbjct: 10 FIDRAADIYDDVTGIVAHDGTEYTYAEVNKRVNRLAHALSDRGVSKGSRVAVLAPNTHYF 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E +A GA+F +N RLD I IL E+ V D+ + + P
Sbjct: 70 IETLYATNKLGAVFVPLNYRLDPAKIEYILNDCEAATVIADYDFAE------KVQPVRDD 123
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SDLDPMVLNY 196
P I P RI + Y +L G P RP ++ D +NY
Sbjct: 124 IPAETFI---------GYEPDRIDGE--WEAYSGIL-DGQPTAEPDRPDMAEDDDASINY 171
Query: 197 TWGTTSAPKGVVQCYK--AFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVV 254
T GTT PKGVV+ ++ ++ + ++ ++ + LWTLPMFH NGW T+
Sbjct: 172 TSGTTGDPKGVVRTHRTESWHALVLNQHME--IRDDDTYLWTLPMFHCNGWGHTYAITGT 229
Query: 255 GATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK------QLDRPVRILT 308
G T+VC R FDA F +R++ V+ MCGAP VLN L A Q DR VRI T
Sbjct: 230 GGTHVCQRTFDAADTFRRVREYDVSFMCGAPTVLNKLIQHYRANDGDVVTQGDRDVRIAT 289
Query: 309 AGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AGS P + R E G+ + H YG TE A + ++ + P+ ++ R R LK +QG
Sbjct: 290 AGSAPATATIERVEDEFGWRIIHIYGLTETAPI-ITTSNSPR--RIAERGR-ELKVKQGS 345
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYY 424
+ T++ +VD E G V DG GE+V++G +M YL PE T + D G ++
Sbjct: 346 EAL-CTDIRVVD-EDGTDVPHDGTAIGEVVVQGNQVMDRYLNKPEITEEAFNDRVEGYFH 403
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
TGD+ DG ++I DR KD+IISGGENISS E+E LY HP V +AAV+ P W E
Sbjct: 404 TGDLATWDEDGMIQIMDRRKDIIISGGENISSIELEDELYDHPDVLKAAVIPAPSEDWGE 463
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P A V +D TE+DI+++ R R+ Y VP + F D LP+TATGK+QKY L
Sbjct: 464 TPMAIVVPTADSD-----VTEQDILEFLRERVASYKVPAGIDFRDSLPETATGKIQKYEL 518
>gi|375007561|ref|YP_004981194.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|359286410|gb|AEV18094.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 531
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 201/542 (37%), Positives = 285/542 (52%), Gaps = 42/542 (7%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
+ PL F +RA D ++I + T T+ + R +LA+ L G+ G V+ +
Sbjct: 2 NAPLVLHHFFDRAVALYGDKTAMICSGRTVTYRELGERVSRLANGLRGLGVRKGDRVAYL 61
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL----- 125
APN M E + V G + +NTRL IL HSE+K++FVD L+
Sbjct: 62 APNTLEMLEGFYGVFEVGGVMVPLNTRLKPDDYVFILNHSETKVLFVDQELYGLIAPVKN 121
Query: 126 -LEVVSLFPPHSKTPKLVLITDDKE--ISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
LE V H KT + T +E + SS+P PR P D EN
Sbjct: 122 KLETVEEIIVHHKTEAAIDETAYEEWLAAQSSAPVPR-PMID-----EN----------- 164
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
D L YT GTT PKGV+ ++ ++ A+ ++ V + L LPMFH
Sbjct: 165 -------DICSLLYTSGTTGNPKGVMLTHRNNYLHALVTMHHLRVSDRDTYLHVLPMFHV 217
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
NGW + GAT + LRK D +F L+++H VT M AP VLN+L E Q D
Sbjct: 218 NGWGAPFYYTANGATQIGLRKVDPKVIFDLVKEHQVTVMHMAPTVLNMLLQYYEQYQPDV 277
Query: 303 P--VRILTAGS-PPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
P VR++ AGS PPPA V E LG+ YG TE + ++ +P+ + LPA ++
Sbjct: 278 PEGVRVVIAGSAPPPAFVARVEEKLGWEFIQVYGMTESSPLSTISLIRPQLDGLPAEQKQ 337
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKA+ G IG EV +VD E G V ++G+ GE+++R +M GY K+ EAT+ ++
Sbjct: 338 RLKAKAGYPMIG-CEVKVVD-ENGEEVPKNGRAIGEVIVRSHGVMKGYWKNEEATAATIR 395
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
DG YTGD+ + G+++I DR KD+IISGGENISS E+E LY HP V EAAV+ P
Sbjct: 396 DGWLYTGDMATVDEYGHIDIVDRKKDIIISGGENISSIEVEGALYEHPAVLEAAVIAVPH 455
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E P AFV ++ G +E+++I + R ++ + V F+DELPKTA+GK+
Sbjct: 456 EKWGETPHAFVVVRP-----GHTVSEEELIAFSREKLAHFKAITGVTFVDELPKTASGKI 510
Query: 540 QK 541
QK
Sbjct: 511 QK 512
>gi|393240316|gb|EJD47843.1| acetyl-CoA synthetase-like protein [Auricularia delicata TFB-10046
SS5]
Length = 565
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 191/558 (34%), Positives = 282/558 (50%), Gaps = 31/558 (5%)
Query: 8 PANSCPLTPLGFIERAATACDDCPSIIYNDT----TYTWSQTYRRCLQLASSLSSFGINP 63
P N PL PL F+ RAA+ D ++++ D YT++ +R LA +L GI P
Sbjct: 25 PVNHTPLNPLNFLLRAASIYPDKVALVHPDVPHPVQYTYAVWAQRVQNLAYALLDAGIRP 84
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+V+APN P + + H+ V + AI +IN RL + IL+HS +K + VD
Sbjct: 85 GDRVAVVAPNCPLIADAHYGVLAARAIVTSINYRLKKHEVDYILEHSGAKFILVD----- 139
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
S+ LV + I S + P P F++ G+ ++ +
Sbjct: 140 ------------SEWAHLVEGHNIPVIVSHDTGRPGCPYEAFLE--HGRRVSGERGWTGL 185
Query: 184 RPKSDLDPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
++D + L YT GTT PKGV+ + ++ A+ + + + ++S LW LPMFH
Sbjct: 186 EIETDENAAATLCYTSGTTGRPKGVIGTLRGSYLAAIANAYESRLTRESTYLWVLPMFHA 245
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
GW+F W T V LR D ++ +R +GVTH CGAP V L ++PEAK+L +
Sbjct: 246 AGWTFPWANVFAFDTQVTLRTVDNKLIWKNLR-NGVTHYCGAPTVQIGLINAPEAKRLAK 304
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
P + AGS P A ++ E L H YG T+ G + L RA +
Sbjct: 305 PATAIIAGSAPTAALIAGLERLNIATVHVYGLTQTYGPMTRNYPQAGLEALSVDARAKIL 364
Query: 363 ARQGVRTIGLTEVDIV---DPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
ARQG EV +V + + + + DG+ GE+VMRG +M Y +D +AT + +
Sbjct: 365 ARQGHGFATADEVRVVAQREDDAIVDIPSDGKAVGEVVMRGNIVMREYYRDAKATREAFR 424
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G + +GD+ + HPDG + I+DRSKD+IISGGEN SS IE L HP V E +VV RP
Sbjct: 425 GGYFRSGDLAVRHPDGSIAIQDRSKDIIISGGENASSLAIEQELAHHPEVLEVSVVARPH 484
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E P AF L+ G G E + + + R+P + P+ V +D LPKT+TGK+
Sbjct: 485 SRWGERPMAFAVLRPGMSGDGF---EARLKAFAKERLPGFACPEWVRVVDALPKTSTGKI 541
Query: 540 QKYVLGDIANSMSMSHSR 557
K L +A ++ R
Sbjct: 542 VKVELRKVAKQLAQEDER 559
>gi|297531112|ref|YP_003672387.1| AMP-dependent synthetase and ligase [Geobacillus sp. C56-T3]
gi|297254364|gb|ADI27810.1| AMP-dependent synthetase and ligase [Geobacillus sp. C56-T3]
Length = 531
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 200/542 (36%), Positives = 284/542 (52%), Gaps = 42/542 (7%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
+ PL F +RA D ++I T T+ + R +LA+ L G+ G V+ +
Sbjct: 2 NAPLVLHHFFDRAVALYGDKTAMICLGRTVTYRELGERVSRLANGLRGLGVRKGDRVAYL 61
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL----- 125
APN M E + V G + +NTRL IL HSE+K++FVD L+
Sbjct: 62 APNTLEMLEGFYGVFEVGGVMVPLNTRLKPDDYVFILNHSETKVLFVDQELYGLIAPVKN 121
Query: 126 -LEVVSLFPPHSKTPKLV--LITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
LE V H KT + + D+ + SS+P PR P D EN
Sbjct: 122 KLETVEEIIVHHKTEAAIDETVYDEWLAAQSSAPVPR-PMID-----EN----------- 164
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
D L YT GTT PKGV+ ++ ++ A+ ++ V + L LPMFH
Sbjct: 165 -------DICSLLYTSGTTGNPKGVMLTHRNNYLHALVTMHHLRVSDRDTYLHVLPMFHV 217
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
NGW + GAT + LRK D +F L+++H VT M AP VLN+L E Q D
Sbjct: 218 NGWGAPFYYTANGATQIGLRKVDPKVIFDLVKEHQVTVMHMAPTVLNILLQYYEQYQPDV 277
Query: 303 P--VRILTAGS-PPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
P VR++ AGS PPPA V E LG+ YG TE + ++ +P+ + LP ++
Sbjct: 278 PEGVRVVIAGSAPPPAFVARVEEKLGWEFIQVYGMTESSPLSTISLIRPQLDGLPVEQKQ 337
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+KA+ G IG EV +VD E G V +G+T GE+++R +M GY K+ EAT+ ++
Sbjct: 338 RIKAKAGYPMIG-CEVKVVD-ENGDEVPHNGRTIGEVIVRSHGVMKGYWKNEEATAATIR 395
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
DG YTGD+ + G+++I DR KD+IISGGENISS E+E LY HP V EAAV+ P
Sbjct: 396 DGWLYTGDMATVDEYGHIDIVDRKKDIIISGGENISSIEVEGALYEHPAVLEAAVIAAPH 455
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E P AFV ++ G + TE+++I + R ++ + V F+DELPKTA+GK+
Sbjct: 456 EKWGETPHAFVVVRPGHN-----VTEEELIAFSREKLAHFKAITGVTFVDELPKTASGKI 510
Query: 540 QK 541
QK
Sbjct: 511 QK 512
>gi|259481194|tpe|CBF74495.1| TPA: AMP-binding enzyme, putative (AFU_orthologue; AFUA_5G04270)
[Aspergillus nidulans FGSC A4]
Length = 592
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 203/576 (35%), Positives = 294/576 (51%), Gaps = 37/576 (6%)
Query: 6 PNPANSCP------LTPLGFIERAATACDDCPSI---------IYNDT--TYTWSQTYRR 48
P P NS L+P F+ RAA D I IY+ T +TY+
Sbjct: 27 PAPVNSFKNVNFHTLSPTFFLPRAAAIEPDHLLILVVMRKAEAIYHITANNQVLRRTYQE 86
Query: 49 CLQLASSLSSFGINPGHV-VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIIL 107
A L+ F G+ V ++ PN PA E F + +GA+ ++N RL I+ I
Sbjct: 87 TADRARGLAYFLKKHGYKRVGILCPNTPAFLESIFGIAAAGAVNVSVNYRLKEDDIAYIF 146
Query: 108 KHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD 167
HS+++++ D L ++S + +++L TD + P + ++
Sbjct: 147 THSDAEIIIAD----KEYLPLLSAYRAAKPHVRVILDTDTDATEGQLAGPFDEAILEGLN 202
Query: 168 TYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVV 227
+ KG + S+ D + L YT GTT+ PKGV ++ ++ A+ ++I+ +
Sbjct: 203 YDRDTGRKGWSALE-SQAASEDDVIALAYTSGTTARPKGVEYTHRGCYLAAMGNIIESGL 261
Query: 228 PKQS---VLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGA 284
Q LWTLPMFH GW+F W V T+ CLRK D P ++ L+++ GVTH A
Sbjct: 262 NFQGRRCKYLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKIDYPQIWKLLKQEGVTHFNAA 321
Query: 285 PIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSC 344
P V LL SSPEA+ L PV + A SPP + + L H YG TE G
Sbjct: 322 PTVNTLLCSSPEAEPLPEPVHVTVAASPPTPHLFEQMTGLNLHPVHVYGMTETYGPITKG 381
Query: 345 AWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPE----TGLSVKRDGQTRGEIVMRG 400
+ W LP +E+ + ARQG + V ++ E T + VK+DG+ GEIV G
Sbjct: 382 YYMTAWENLPRKEKFARMARQGHGFLTSLPVRVIQTEVPEGTIIDVKQDGKEIGEIVFVG 441
Query: 401 GSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIE 460
GY KDPEAT K G ++GD+ + HPDG ++I DR+KD+IISGGENISS +E
Sbjct: 442 NICARGYYKDPEATRKLFAGGVLHSGDLAVWHPDGAIQILDRAKDIIISGGENISSVALE 501
Query: 461 SVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPR 518
S+L +HP + EA VV PD W E P AFV++K G G KD++ + R + I +
Sbjct: 502 SMLVTHPDILEAGVVAVPDSHWGERPKAFVTVKPGRQLKG-----KDVVDWARNTSGISK 556
Query: 519 YMVPKTVVFIDELPKTATGKVQKYVLGDIANSMSMS 554
+MVP+ V + ELPKT+TGK++K VL + A S S
Sbjct: 557 FMVPREVEVVAELPKTSTGKLRKNVLREWAKDGSRS 592
>gi|212640043|ref|YP_002316563.1| acyl-CoA synthetase [Anoxybacillus flavithermus WK1]
gi|212561523|gb|ACJ34578.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Anoxybacillus
flavithermus WK1]
Length = 542
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 193/540 (35%), Positives = 280/540 (51%), Gaps = 39/540 (7%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
+ PL F++RA + D +I + T+ + R QL+ LS G+ G V+ +
Sbjct: 14 NVPLVLTHFLDRAVSLYGDKVGVISEGKSLTYREFSERVNQLSHGLSDLGVKKGDRVAYL 73
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL----- 125
APN M E + V +GAI +N RL IL HSESK++FVD+ L+
Sbjct: 74 APNTLEMLEGFYGVFQTGAIMVPLNIRLKPDDYVFILNHSESKVLFVDYELYHLIAPIKD 133
Query: 126 -LEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
L+ + H KT + I D ++ + P P D EN
Sbjct: 134 ELQTIEYIIVHGKTDDIHEIAYDTWLAQYTKEPFERPDID-----EN------------- 175
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
D L YT GTT PKGV+ ++ ++ A+ ++ V + V L LPMFH NG
Sbjct: 176 -----DVCSLLYTSGTTGNPKGVMLTHRNNYLHALSTMHHLRVSDRDVYLHILPMFHVNG 230
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK--QLDR 302
W + GAT+VCLRK T+F + ++ VT M AP VLN L E ++
Sbjct: 231 WGAPFYYTANGATHVCLRKAIPETIFEYVNQYKVTVMHMAPTVLNTLLQYYEQHVPTIEH 290
Query: 303 PVRILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
VR++ AGS PP + R E LG+ YG TE + ++ + + LP ++ +
Sbjct: 291 DVRVVIAGSAPPPAFVTRVEKELGWEFIQVYGMTESSPLSTVSTIRAHLDHLPLSDQYRM 350
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
KA+ G IG EV +VD E G V RDG+T GE+++R +M GY K+PEAT + +++G
Sbjct: 351 KAKAGYAMIG-CEVKVVD-EHGEQVPRDGKTIGEVIVRSNGVMAGYWKNPEATMETIRNG 408
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+TGD+ + G ++I DR KD+IISGGENISS E+E VLY HP V EAAV+ P
Sbjct: 409 WLHTGDMATIDAYGNIDIVDRKKDIIISGGENISSIEVEGVLYEHPAVLEAAVIAVPHEK 468
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P AFV ++ G + TE+++I + R ++ + V F+ ELPKTA+GK+QK
Sbjct: 469 WGETPHAFVVVRPGKE-----VTEQELIAFSREKLAHFKAITGVTFVQELPKTASGKIQK 523
>gi|261418937|ref|YP_003252619.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC61]
gi|319765755|ref|YP_004131256.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC52]
gi|261375394|gb|ACX78137.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC61]
gi|317110621|gb|ADU93113.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC52]
Length = 531
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 200/542 (36%), Positives = 284/542 (52%), Gaps = 42/542 (7%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
+ PL F +RA D ++I + T T+ + R +LA+ L G+ G V+ +
Sbjct: 2 NAPLLLHHFFDRAVALYGDKTAMICSGRTVTYRELGERVSRLANGLRGLGVRKGDRVAYL 61
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL----- 125
APN M E + V G + +NTRL IL HSE+K++FVD L+
Sbjct: 62 APNTLEMLEGFYGVFEVGGVMVPLNTRLKPDDYVFILNHSETKVLFVDQELYGLIAPVKN 121
Query: 126 -LEVVSLFPPHSKTPKLVLIT--DDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
LE V H KT + T D+ + SS+P PR P D EN
Sbjct: 122 KLETVEEIIVHHKTEAAIDETAYDEWLAAQSSAPVPR-PMID-----EN----------- 164
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
D L YT GTT PKGV+ ++ ++ A+ ++ V + L LPMFH
Sbjct: 165 -------DVCSLLYTSGTTGNPKGVMLTHRNNYLHALVTMHHLRVSDRDTYLHVLPMFHV 217
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
NGW + GAT + LRK D +F L+++H VT M AP VLN+L E Q D
Sbjct: 218 NGWGAPFYYTANGATQIGLRKVDPKVIFDLVKEHQVTVMHMAPTVLNMLLQYYEQYQPDV 277
Query: 303 P--VRILTAGS-PPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
P VR++ AGS PPPA V E LG+ YG TE + ++ +P+ + LP ++
Sbjct: 278 PEGVRVVIAGSAPPPAFVARVEEKLGWEFIQVYGMTESSPLSTISLIRPQLDGLPVEQKQ 337
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
+KA+ G IG EV +VD E G V +G+ GE+++R +M GY K+ EAT+ ++
Sbjct: 338 RIKAKAGYPMIG-CEVKVVD-ENGDEVPHNGRAIGEVIVRSHGVMKGYWKNEEATAATIR 395
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
DG YTGD+ + G+++I DR KD+IISGGENISS E+E LY HP V EAAV+ P
Sbjct: 396 DGWLYTGDMATVDEYGHIDIVDRKKDIIISGGENISSIEVEGALYEHPAVLEAAVIAAPH 455
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E P AFV ++ G + TE+++I + R ++ + V F+DELPKTA+GK+
Sbjct: 456 EKWGETPHAFVVVRPGHN-----VTEEELIAFSREKLAHFKAITGVTFVDELPKTASGKI 510
Query: 540 QK 541
QK
Sbjct: 511 QK 512
>gi|384491611|gb|EIE82807.1| hypothetical protein RO3G_07512 [Rhizopus delemar RA 99-880]
Length = 668
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 191/543 (35%), Positives = 283/543 (52%), Gaps = 70/543 (12%)
Query: 13 PLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSL-SSFGINPGHVVSVIA 71
PL PL F+ R++ + ++I+ +YT+ + R +LA+ L ++ + G V+++
Sbjct: 43 PLDPLRFLLRSSMVFAEKTAVIHRQRSYTYRELSDRVRRLATVLIKAYHVKKGDRVAILC 102
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH-LSSSLLLEVVS 130
NIP+ E +A+P +G I +NTRL A I IL+HS + L+ + S + + S
Sbjct: 103 QNIPSNLESMYAIPATGGIMVPVNTRLVAEEIEYILRHSGATLLILQQEFESKMTNAIKS 162
Query: 131 LFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLD 190
L K++ + D S +P D YE MLA W D
Sbjct: 163 LV-------KIIYVAD------SDNPNQ--------DPYEMMLANCKKPKLW-----DEM 196
Query: 191 PMV--------LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
P++ +NYT G+T PKGV+ Y+ ++ A+ +I + +V LWT+PMFH
Sbjct: 197 PLLNDENAVFSINYTSGSTGRPKGVMASYRGVYLNALGMIIQGALSTNTVYLWTVPMFHC 256
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
NGWSF W VG+T V L K D ++ L+ KH +TH GAP V N L + +A +L+
Sbjct: 257 NGWSFPWALVAVGSTQVMLNKIDYSLIWDLLIKHNITHYNGAPTVQNELCNHKKAVRLNH 316
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAG---VNVSCAWKPKWNKLPARERA 359
PVR+L+ YG TE G + A ++N+ ++R
Sbjct: 317 PVRVLSGV---------------------YGLTETYGPAVLGYDVAILSEYNEEEQQKRL 355
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
ARQG TI E+ +++ ++GL V +G+ GE+ G +MLGY DPE T K K
Sbjct: 356 ---ARQGYNTIISDELRVLNKDSGLDVTANGKEIGEVCFTGNLVMLGYYNDPEETEKAFK 412
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G +++GD+ + HPDG +EI DRSKD+I+SGGENISS E+E+V+ V E A+V PD
Sbjct: 413 GGVFWSGDLAVRHPDGTIEILDRSKDIIVSGGENISSIEVENVVVQLEEVMECAIVSEPD 472
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDII-QYCRARIPRYMVPKTVVFIDELPKTATGK 538
W E P AFV LK G T DII +CR + Y P+ V+FI ELPKT+T
Sbjct: 473 DKWGERPVAFVVLKAGK------TLTADIIFDHCRKLLAGYKCPEKVIFIKELPKTSTVL 526
Query: 539 VQK 541
+Q+
Sbjct: 527 IQE 529
>gi|56419228|ref|YP_146546.1| AMP-binding protein [Geobacillus kaustophilus HTA426]
gi|56379070|dbj|BAD74978.1| AMP-binding enzyme [Geobacillus kaustophilus HTA426]
Length = 531
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 200/542 (36%), Positives = 284/542 (52%), Gaps = 42/542 (7%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
+ PL F +RA D ++I + T T+ + R +LA+ L G+ G V+ +
Sbjct: 2 NAPLVLHHFFDRAVALYGDKTAMICSGRTVTYRELGERVSRLANGLRGLGVRKGDRVAYL 61
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL----- 125
APN M E + V G + +NTRL IL HSE+K++FVD L+
Sbjct: 62 APNTLEMLEGFYGVFEVGGVMVPLNTRLKPDDYVFILNHSETKVLFVDQELYGLIAPVKN 121
Query: 126 -LEVVSLFPPHSKTPKLVLITDDKE--ISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
LE V H KT + T +E + SS+P PR P D EN
Sbjct: 122 KLETVEEIIVHHKTEAAIDETAYEEWLAAQSSAPVPR-PMID-----EN----------- 164
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHN 242
D L YT GTT PKGV+ ++ ++ A+ ++ V + L LPMFH
Sbjct: 165 -------DICSLLYTSGTTGNPKGVMLTHRNNYLHALVTMHHLRVSDRDTYLHVLPMFHV 217
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
NGW + GAT + LRK D +F L+++H VT M AP VLN+L E Q D
Sbjct: 218 NGWGAPFYYTANGATQIGLRKVDPKVIFDLVKEHQVTVMHMAPTVLNMLLQYYEQYQPDV 277
Query: 303 P--VRILTAGS-PPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
P VR++ AGS PPPA V E LG+ YG TE + ++ +P+ + LP ++
Sbjct: 278 PEGVRVVIAGSAPPPAFVARVEEKLGWEFIQVYGMTESSPLSTISLIRPQLDGLPVEQKQ 337
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
LKA+ G IG EV +VD E G V ++G+ GE+++R +M GY K+ EAT+ ++
Sbjct: 338 RLKAKAGYPMIG-CEVKVVD-ENGEEVPKNGRAIGEVIVRSHGVMKGYWKNEEATAATIR 395
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
DG YTGD+ + G+++I DR KD+IISGGENISS E+E LY HP V EAAV+ P
Sbjct: 396 DGWLYTGDMATVDEYGHIDIVDRKKDIIISGGENISSIEVEGALYEHPAVLEAAVIAVPH 455
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E P AFV ++ G +E+++I + R ++ + V F+DELPKTA+GK+
Sbjct: 456 EKWGETPHAFVVVRP-----GHTVSEEELIAFSREKLAHFKAITGVTFVDELPKTASGKI 510
Query: 540 QK 541
QK
Sbjct: 511 QK 512
>gi|342885826|gb|EGU85778.1| hypothetical protein FOXB_03626 [Fusarium oxysporum Fo5176]
Length = 588
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 187/578 (32%), Positives = 305/578 (52%), Gaps = 34/578 (5%)
Query: 1 MDRLKPNP---ANSCPLTPLGFIERAATACDDCPSIIYNDTT-YTWSQTYRRCLQLASSL 56
++ L+P+P N L+P F+ERAA+ D +I + ++Y A L
Sbjct: 12 LNHLRPHPTAPVNFHTLSPTTFLERAASIEPDAEAIFHITVNGAVLRRSYAEFADRARGL 71
Query: 57 SSFGINPGHV-VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLV 115
+ + + G+ V ++APN PA E + + +GA +N RL I+ I +E +
Sbjct: 72 AYYFLKHGYRRVGILAPNTPAFLESIYGIVAAGAAIVPVNYRLKQDDIAYIFDFAEVDCI 131
Query: 116 FVD-------------HLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPP 162
VD H S L++++V P L + + + ++ P
Sbjct: 132 IVDNEFVGLLDAYKEKHQSVPLIVDMVDFLPRTHVHSCLETVANLARQDTDATEGQLSGP 191
Query: 163 AD--FVDTYENMLAKGDPQFSWV--RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIA 218
D ++ ++ + +G ++ + + +S+ D + + +T GTTS PKGVV ++ ++ A
Sbjct: 192 FDEAVLEGLKHDIDQGSHGWAGLHAQARSEDDMLAIPFTSGTTSRPKGVVYTHRGAYLAA 251
Query: 219 VDSLID-WVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHG 277
+ ++I+ + + LWTLPMFH GW+F W V TNVCLRK D P ++ L+++ G
Sbjct: 252 MANIIESGLNIGRCKYLWTLPMFHAIGWTFPWSVVAVRGTNVCLRKIDYPLIWKLLKEEG 311
Query: 278 VTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEI 337
+TH AP V LL ++ EA++L + V++ A SPP + + L + H YG TE
Sbjct: 312 ITHFNAAPTVNTLLVAAREAERLPQEVKVTVAASPPTGYLFEQMTKLNLMPVHVYGMTET 371
Query: 338 AGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETG----LSVKRDGQTR 393
G C P+W+ LP +E+ + +RQG I + ++ P+ + V +DG+
Sbjct: 372 YGPITKCYILPEWDDLPPQEKFAKMSRQGHGFITSQPIRVIKPDQPQGVLIDVAKDGKEV 431
Query: 394 GEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGEN 453
GEIV G GY KDPEAT + G ++GD+ + HPDG +I+DR+KD+IISGGEN
Sbjct: 432 GEIVFIGNICAKGYYKDPEATRQLFAGGVLHSGDLAVWHPDGSAQIQDRAKDIIISGGEN 491
Query: 454 ISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR 513
ISS +ES+L HP + EA V PD W E P ++++K G G +++I + +
Sbjct: 492 ISSVALESMLAQHPDILEAGAVAVPDSHWGERPKVYITVKDGKSVTG-----EEVISWAK 546
Query: 514 AR--IPRYMVPKTVVFIDELPKTATGKVQKYVLGDIAN 549
+ I ++MVP+ V +DELPKT+TGK++K VL + A
Sbjct: 547 HQSDISKFMVPREVEVVDELPKTSTGKIKKNVLREWAK 584
>gi|448689091|ref|ZP_21694828.1| medium-chain acyl-CoA ligase [Haloarcula japonica DSM 6131]
gi|445778961|gb|EMA29903.1| medium-chain acyl-CoA ligase [Haloarcula japonica DSM 6131]
Length = 533
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 202/540 (37%), Positives = 282/540 (52%), Gaps = 45/540 (8%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
FI+RAA DD I+ +D T YT+++ R +LA +LS G++ G V+++APN
Sbjct: 10 FIDRAADIYDDVTGIVAHDGTEYTYAEVNERINRLAHALSDRGVSKGSRVALLAPNTHYF 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E +A GA+F +N RLD I IL E+ V D+ + + P
Sbjct: 70 IETLYATNKLGAVFVPLNYRLDPAKIEYILNDCEAATVIADYDFAE------KVQPVRDD 123
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SDLDPMVLNY 196
P I P RI + Y +L G P RP ++ D +NY
Sbjct: 124 IPAETFI---------GYEPDRIDGE--WEAYSGIL-DGQPTAEPDRPDMTEDDDASINY 171
Query: 197 TWGTTSAPKGVVQCYK--AFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVV 254
T GTT PKGVV+ ++ ++ + ++ ++ + LWTLPMFH NGW T+
Sbjct: 172 TSGTTGDPKGVVRTHRTESWHALVLNQHME--IRDDDTYLWTLPMFHCNGWGHTYAITGT 229
Query: 255 GATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK------QLDRPVRILT 308
G T+VC R FDA F +R++ V+ MCGAP VLN L A Q DR VRI T
Sbjct: 230 GGTHVCQRTFDAADTFRRVREYDVSFMCGAPTVLNKLIQHYRANDGDVVTQGDRDVRIAT 289
Query: 309 AGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AGS P + E G+ + H YG TE A + ++ + P+ ++ R R LK +QG
Sbjct: 290 AGSAPATATIESVEDEFGWRIIHIYGLTETAPI-ITTSNSPR--RIAERGR-ELKVKQGS 345
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYY 424
+ + T++ +VD E G V RDG GEIV++G +M YL PE T + D G ++
Sbjct: 346 QAL-CTDIRVVD-EDGNDVPRDGTAIGEIVVQGNQVMDRYLNKPEITEEAFNDRVEGYFH 403
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
TGD+ DG ++I DR KD+IISGGENISS E+E LY HP V +AAV+ P W E
Sbjct: 404 TGDLATWDEDGMVQIMDRRKDIIISGGENISSIELEDELYDHPDVLKAAVIPAPSEDWGE 463
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P A V +D TE+DI+++ R R+ Y VP + F D LP+TATGK+QKY L
Sbjct: 464 TPMAIVVPTADSD-----VTEQDILEFLRERVASYKVPAGIDFRDSLPETATGKIQKYEL 518
>gi|358391754|gb|EHK41158.1| AMP-binding domain protein [Trichoderma atroviride IMI 206040]
Length = 567
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 195/552 (35%), Positives = 284/552 (51%), Gaps = 32/552 (5%)
Query: 8 PANSCP-----LTPLGFIERAATACDDCPSIIYNDTT-----YTWSQTYRRCLQLASSLS 57
P +S P L+P F+ERAA+ + +I + + ++ + R LA L
Sbjct: 17 PQHSTPPHIHQLSPTFFLERAASIEPNAEAIFHITSNGAILHRSYQEFADRARGLAYYLK 76
Query: 58 SFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFV 117
G V V+APN PA E + +P +G + N RL I+ I + +E + V
Sbjct: 77 KHGFK---RVGVLAPNTPAFLEAIYGIPAAGGVIAPANYRLKPDDIAYIFEFAEVDSIIV 133
Query: 118 DHLSSSLLLEVVSLFPPHSKTPKLVLITD-DKEISSSSSPPPRIPPADFVDTYENMLAKG 176
DH LL LF + PK+ LI D D + + P Y+
Sbjct: 134 DHEFVGLL----DLF--KERHPKIPLIIDSDTDATEGQLCGPFDEAVLEGLNYDRSTGNT 187
Query: 177 DPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPK-QSVLLW 235
++ D + + +T GTTS PKGVV + ++ A+ ++I+ + + LW
Sbjct: 188 GWAGLHAHATNEDDMIAIPFTSGTTSRPKGVVYTNRGSYLAAMGNIIESGLNNGRCKYLW 247
Query: 236 TLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP 295
TLPMFH GW+F W V NVCLRK D P ++ L+++ G+TH AP V LL ++
Sbjct: 248 TLPMFHAIGWTFPWAVVAVRGVNVCLRKIDYPLIWKLLKEQGITHFNAAPTVNTLLVAAK 307
Query: 296 EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
EA++L + VR+ A SPP + + +L I H YG TE G C P+W+ LP
Sbjct: 308 EAERLPQEVRVTVAASPPSGHLFEQMTNLNLIPVHVYGMTETYGPLTKCYILPEWDNLPP 367
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETG----LSVKRDGQTRGEIVMRGGSLMLGYLKDP 411
E+ + ARQG I + IV P+ + V +DG+ GEIV G Y KDP
Sbjct: 368 HEKYAKMARQGHGFITSLPIRIVKPDQPNGALIDVAKDGKEIGEIVFFGNLCAKEYYKDP 427
Query: 412 EATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNE 471
EAT K + G +GD+ + HPDG +I DR+KD+IISGGENISS +ES+L HP V E
Sbjct: 428 EATRKLFEGGALRSGDLAVWHPDGSAQILDRAKDIIISGGENISSVALESMLVEHPDVLE 487
Query: 472 AAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFID 529
A VV PD W E P A+V++K G + G +D+I + + + I ++MVP+ V +
Sbjct: 488 AGVVSVPDSHWGERPKAYVTVKEGKNLVG-----EDVINWAKHQSNISKFMVPREVEIVK 542
Query: 530 ELPKTATGKVQK 541
ELPKT+TGK++K
Sbjct: 543 ELPKTSTGKIKK 554
>gi|170084069|ref|XP_001873258.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650810|gb|EDR15050.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 546
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 209/557 (37%), Positives = 282/557 (50%), Gaps = 45/557 (8%)
Query: 15 TPLGFIERAATACDDCPSIIYNDTT----YTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
PL FI RAA D S+I+ D T YT+ +R LA +L GI PG V+VI
Sbjct: 15 NPLSFILRAAQIYPDKISLIHTDVTNPVVYTFGIWAQRIQNLAYALIEAGIRPGDRVAVI 74
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVS 130
APN P + + H A+ + AI INTRL + ++ IL+HS S+L+ VD+ + L
Sbjct: 75 APNSPLIADAHHAIIAARAIITPINTRLKPQEVTYILEHSGSRLILVDYEYAHLAQS--- 131
Query: 131 LFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLD 190
+K P V+I++D D YE+ L G +FS + + LD
Sbjct: 132 -----NKIP--VIISNDTGRDG--------------DPYESFLTDGR-RFSEEKGWAGLD 169
Query: 191 P-------MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
VL YT GTT PKGVV + ++ A+ + + + + S LW LPMFH
Sbjct: 170 AEPDENAAAVLCYTSGTTGRPKGVVTTLRGSYLAAIANAFEAQMNQDSTYLWILPMFHAA 229
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW+F W AT V LR D ++ + VTH CGAP V + + P A++L +P
Sbjct: 230 GWTFPWANVFAFATQVTLRTVDYSYIWNHLLHSAVTHYCGAPTVQIGIYNHPLARRLPKP 289
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
V + AG+ P ++ E G H YG TE G + W + +RA L A
Sbjct: 290 VTAIIAGAAPTPHLISELEKKGIKPVHVYGLTETYGPFTRNYEQASWAAMSLEDRARLMA 349
Query: 364 RQG--VRTIGLTEVDIVDPETG----LSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
RQG T G V V E V RDG+T GEIV RG +M Y +DPEAT K
Sbjct: 350 RQGHAFATAGEVRVVYVHGENEDRPLKDVPRDGKTLGEIVTRGNIVMKEYFRDPEATKKA 409
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
+ G + +GD+ +MHPDG + I DRSKD+IISGGEN SS IE L SHP V E +VV R
Sbjct: 410 FRGGSFRSGDLAVMHPDGSVAIMDRSKDIIISGGENASSLAIEQELASHPHVLEVSVVAR 469
Query: 478 PDPFWQEIPCAFVSLKTGTDS---GGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKT 534
P W E P AFV L S G E+D+ Q+ + R+P + P+ V + ELPKT
Sbjct: 470 EHPKWGERPMAFVILHPQHASHWHGRHHEFERDLKQHAKPRLPGFACPEWVEVVPELPKT 529
Query: 535 ATGKVQKYVLGDIANSM 551
+TGK+ K L + +
Sbjct: 530 STGKILKTELRKVVAKL 546
>gi|448395799|ref|ZP_21568893.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
gi|445660380|gb|ELZ13176.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
Length = 532
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 201/537 (37%), Positives = 285/537 (53%), Gaps = 40/537 (7%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
F+ERA + D ++ +D T YT+ + R QLA +L G+ G V+++APN
Sbjct: 10 FLERAVDSYGDVTGVVAHDGTEYTYEEVNDRVNQLAHALEERGVEQGDRVALLAPNTHYF 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E +A GA+F +N RL A IL+ + + D + + + P +
Sbjct: 70 IETLYATNKLGAVFVPLNYRLAAGEYQYILEDCAANTIVADDDYAEKIEAIRDGVPAET- 128
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SDLDPMVLNY 196
V D EI + YE++L +G P RP+ S+ D +NY
Sbjct: 129 ---FVGYRAD-EIKG------------HWEDYEDLL-EGQPTEEPDRPEISEDDDASINY 171
Query: 197 TWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGA 256
T GTT PKGVV+ ++ A+ + LWTLPMFH NGW T+ G
Sbjct: 172 TSGTTGNPKGVVRTHRTEHWHALVLNQHMEIRDDDTYLWTLPMFHCNGWGHTYAITGTGG 231
Query: 257 TNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAKQL----DRPVRILTAGS 311
T+VC R FDA VF +R+H V+ MCGAP VLN L+ E L DR VRI TAGS
Sbjct: 232 THVCQRTFDAEGVFERVREHDVSFMCGAPTVLNNLIQYHEEHPDLETTGDRDVRIATAGS 291
Query: 312 PPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTI 370
P + E G+ + H YG TE A + ++ + P+ +L R R LK +QG +T+
Sbjct: 292 APATATIETVEDEFGWRIIHIYGLTETAPI-ITTSNSPR--RLAERGR-ELKVKQGSQTL 347
Query: 371 GLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYYTGD 427
T+V +VD E G V RDG+T GEIV+RG +M YL+ P+AT + + G ++TGD
Sbjct: 348 -CTDVRVVD-EDGEEVPRDGETIGEIVVRGNQVMDRYLEKPDATEQAFSERLEGYFHTGD 405
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+ + DG + I+DR KD+IISGGENISS E+E VLY HP V +AAV+ P W E P
Sbjct: 406 LATIDEDGMVAIQDRKKDIIISGGENISSIEVEDVLYDHPDVGKAAVIPVPSEEWGETPK 465
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
A V ++ + TE +I+++ + Y P +V F+++LP+TATGKVQKY L
Sbjct: 466 ALVVPRSDAEP-----TEDEILEFVGEHLAGYKKPSSVDFVEDLPETATGKVQKYEL 517
>gi|408399635|gb|EKJ78733.1| hypothetical protein FPSE_01101 [Fusarium pseudograminearum CS3096]
Length = 588
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 191/582 (32%), Positives = 297/582 (51%), Gaps = 42/582 (7%)
Query: 1 MDRLKPNPA---NSCPLTPLGFIERAATACDDCPSIIYNDTT-YTWSQTYRRCLQLASSL 56
+ L+P+PA N L+P F+ERAA D +I + ++Y A L
Sbjct: 12 LSHLRPHPAAPVNYHTLSPTTFLERAAAIEPDAEAIFHITVNGAVLRRSYAEFADRARGL 71
Query: 57 SSFGINPGHV-VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLV 115
+ + + G+ V V+APN PA E + + +GA+ N RL I+ I +E +
Sbjct: 72 AYYLLKHGYRRVGVLAPNTPAFLESIYGIVAAGAVIVPANYRLKQEDIAYIFDFAEVDCI 131
Query: 116 FVD-------------HLSSSLLLEVVSLFPPHSKTP------KLVLITDDKEISSSSSP 156
VD H + L++++V P L +D + S P
Sbjct: 132 IVDNEFVGLLDAYKEKHKNVPLIVDMVDFLPREQAQACFEAIANLAFQDNDATVGQLSGP 191
Query: 157 PPRIPPADFVDTYENMLAKGDPQFSWV--RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAF 214
++ ++ +A+G ++ + + +S+ D + + +T GTTS PKGVV ++
Sbjct: 192 FDDA----VLEGLKHDIAQGSQGWAGLHSQARSEDDMLAIPFTSGTTSKPKGVVYTHRGS 247
Query: 215 FIIAVDSLID-WVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALI 273
++ + ++++ + + LWTLPMFH GW+F W V TNVCLRK D P ++ L+
Sbjct: 248 YLATMANIVESGLNIGRCKYLWTLPMFHAVGWTFPWAVVAVRGTNVCLRKIDYPLIWKLL 307
Query: 274 RKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYG 333
++ G+TH AP V LL ++ EA++L V++ A SPP + + L I H YG
Sbjct: 308 KEEGITHFNAAPTVNTLLVAAKEAEKLPHEVKVTVAASPPTGYLFEQMTKLNLIPVHVYG 367
Query: 334 KTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETG----LSVKRD 389
TE G C P+W+ LP E+ + +RQG I + I+ P+ + V +D
Sbjct: 368 MTETYGPITKCYTLPEWDNLPPTEKYAKMSRQGHGFITSLPIRIIKPDQPQGVLIDVAKD 427
Query: 390 GQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIIS 449
G+ GEIV G Y KDP AT + G ++GD+ + HPDG +I+DR+KD+IIS
Sbjct: 428 GKEIGEIVFMGNICAKEYYKDPAATRELFAGGVLHSGDLAVWHPDGSAQIQDRAKDIIIS 487
Query: 450 GGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDII 509
GGENISS +ES+L HP + E V PD W E P +V++K G G +II
Sbjct: 488 GGENISSVALESMLAQHPDILEVGAVAVPDSHWGERPKVYVTVKDGKSVTG-----DEII 542
Query: 510 QYCRAR--IPRYMVPKTVVFIDELPKTATGKVQKYVLGDIAN 549
Q+ + + I R+MVP+ V +DELPKT+TGK++K VL + A
Sbjct: 543 QWAKHQSDISRFMVPREVEIVDELPKTSTGKIKKNVLREWAK 584
>gi|404330202|ref|ZP_10970650.1| fatty acyl CoA synthase [Sporolactobacillus vineae DSM 21990 =
SL153]
Length = 530
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 191/529 (36%), Positives = 278/529 (52%), Gaps = 24/529 (4%)
Query: 19 FIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMY 78
+ RA D +++ + T+ Q R +L+ L+ GI G V+ +APN M
Sbjct: 10 LLTRAVRYYPDKTAVVDGEIRLTYVQFQERVNRLSRMLTGLGIKKGDRVAYLAPNTLQML 69
Query: 79 ELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKT 138
E F V GA+ +NTRL + IL HS + ++ D + L+ V +
Sbjct: 70 EGMFGVMQIGAVTVPLNTRLMPTDYAYILNHSGAGILLADADLAPLIEPVKDEL---RRI 126
Query: 139 PKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTW 198
+L+ P P + + YE +LA + + +LD + YT
Sbjct: 127 EHFLLL-----------PSPSVSEREGWTGYEPLLATYPAEKPVIPEMDELDLASILYTS 175
Query: 199 GTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATN 258
GTT PKGV+ +++ F A+++++ V VLL TLP+FH NGW + +GAT+
Sbjct: 176 GTTGLPKGVMHSHRSLFFNALNTVVHLRVSDHDVLLHTLPLFHVNGWGTPFTFTGMGATH 235
Query: 259 VCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL--DRPVRILTAGS-PPPA 315
V LRK D +F L+++ VT C AP VL++L + P+A+ VR++ AGS PPP+
Sbjct: 236 VMLRKIDPAHIFKLVKEEKVTIACMAPTVLSMLVNDPQAQTFTPKHHVRVVIAGSAPPPS 295
Query: 316 PVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEV 375
V E L + YG TE A K ++ +KA+ G+ + + EV
Sbjct: 296 YVQKVEEQLKWEFVQVYGMTEAAPFLTVSHVKAHLDQ-SKENLHRIKAKAGIGMLNM-EV 353
Query: 376 DIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDG 435
+VD E G V+ DG GEIV RG S+M GY P+ T K KDG YYTGD+G + +G
Sbjct: 354 RVVD-ENGQDVRPDGTQVGEIVTRGNSVMEGYWLQPDETEKVFKDGWYYTGDMGTIDQEG 412
Query: 436 YLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTG 495
Y+EI DR KD+IISGGENISS E+E VLY HP + EA V+ P W E+P A +K
Sbjct: 413 YIEIVDRKKDIIISGGENISSIEVEGVLYRHPAILEATVIAVPHDKWGEVPHAVCVVKKD 472
Query: 496 TDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
+ TE+D+I +CR +P + VPK+ F++ELPKTA+GK+QK L
Sbjct: 473 MPAA----TEQDLIAFCRTLLPSFKVPKSCSFVEELPKTASGKIQKVKL 517
>gi|302695743|ref|XP_003037550.1| hypothetical protein SCHCODRAFT_49211 [Schizophyllum commune H4-8]
gi|300111247|gb|EFJ02648.1| hypothetical protein SCHCODRAFT_49211 [Schizophyllum commune H4-8]
Length = 580
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 204/584 (34%), Positives = 286/584 (48%), Gaps = 69/584 (11%)
Query: 8 PANSCPLTPLGFIERAAT--------ACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSF 59
P N PL P+ F+ +AA A D P +Y Y+++ +R LA +L
Sbjct: 26 PVNYHPLNPVQFLLKAALLHPDKLALASPDGPHPVY----YSFAVWAQRVQNLAYALIQA 81
Query: 60 GINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDH 119
I PG V+VIAPN P + + +F V + AI +NTRL + I++HS S+ + VDH
Sbjct: 82 RIRPGDRVAVIAPNSPMIADSYFGVLAARAIVCAVNTRLRPDDVKYIIEHSGSRFILVDH 141
Query: 120 LSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ 179
+ LL + P +V + D YE+ L G
Sbjct: 142 EFTHLLKGI--------NLPTIVCHDTGRA----------------GDPYEDFLTSGR-A 176
Query: 180 FSWVRPKSDLD-------PMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSV 232
FS R LD VL YT GTT PKGV+ Y+ ++ A+ + ++ + SV
Sbjct: 177 FSRERGWLGLDVEADENAAAVLCYTSGTTGRPKGVLTTYRGSYLAAIANAVEAEMNYDSV 236
Query: 233 LLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFD-APTVFALIRKHGVTHMCGAPIVLNLL 291
LW +P+FH GW + W AA +T V LR P L+ TH C AP V L
Sbjct: 237 YLWIVPLFHAAGWCYAWSAAFAFSTQVTLRTAAPGPIWQRLLAPPSATHYCAAPTVQISL 296
Query: 292 SSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWN 351
++ EA+++ VR + AGS P + ++ ESLG V H YG TE G V +P W
Sbjct: 297 VNATEARRVAHSVRTIVAGSAPTSSLIASLESLGIRVVHVYGLTETYGPFVRSYARPHWK 356
Query: 352 KLPARERASLKARQGVRTIGLTEVDIV-DPETGLS-------VKRDGQTRGEIVMRGGSL 403
L ERA L ARQG E +V P+ G S V +DG+T GEIV RG +
Sbjct: 357 DLSLEERAKLMARQGHAFATALEARVVYPPKDGESDDGELVDVPKDGKTIGEIVTRGNIV 416
Query: 404 MLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVL 463
M YL DP+AT K + + TGD+ + DG +++ DRSKD+IISGGEN SS IE L
Sbjct: 417 MKEYLNDPKATRKAFRGNHFNTGDLAVWFEDGSIQVMDRSKDIIISGGENASSLAIEQEL 476
Query: 464 YSHPMVNEAAVVGRPDPFWQEIPCAFVSLK-------------TGTDSGGMM---TTEKD 507
+HP + E +V+ R P W E P AFV L+ G D+ G E++
Sbjct: 477 ATHPALQEVSVIARTHPKWGERPMAFVILRPGARKQWGADCGAKGKDTNGKQQPSAFERE 536
Query: 508 IIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSM 551
+ Y + R+P + P+ V +DELPKT+TGK+QK+ L + +
Sbjct: 537 LKAYAKGRLPGFACPEWVEVVDELPKTSTGKIQKHELRKVVAKL 580
>gi|119496593|ref|XP_001265070.1| AMP-binding domain protein, putative [Neosartorya fischeri NRRL
181]
gi|119413232|gb|EAW23173.1| AMP-binding domain protein, putative [Neosartorya fischeri NRRL
181]
Length = 576
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 203/573 (35%), Positives = 297/573 (51%), Gaps = 36/573 (6%)
Query: 3 RLKPNPA-----NSCPLTPLGFIERAATACDDCPSIIY---NDTTY--TWSQTYRRCLQL 52
+K +PA N L+P F+ RAA D +I + N+ T+ +T R L
Sbjct: 19 EVKDHPAPQHRINYHTLSPTFFLPRAAAIEPDAEAIYHVTANNQVLRRTYIETADRARGL 78
Query: 53 ASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSES 112
A L G V ++ PN PA E F + +GA+ +N RL I+ I HS++
Sbjct: 79 AYYLKKHGFKR---VGILCPNTPAFLESIFGIAAAGAVNIAVNYRLKEDDIAYIFTHSDA 135
Query: 113 KLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITD-DKEISSSSSPPPRIPPADFVDTYE- 170
+++ VD LL + P + +I D D + + P Y+
Sbjct: 136 EVIIVDKEYLPLLQAY------RAAKPDIPVIVDTDTDATEGQLSGPFDEAVLLGLKYDA 189
Query: 171 NMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQ 230
+ AKG + S+ D + L YT GTT+ PKGV ++ ++ A+ ++I+ + Q
Sbjct: 190 DTGAKGWDGLE-SQAASEDDVIALAYTSGTTARPKGVEFTHRGCYLAALANVIESGLNFQ 248
Query: 231 S---VLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIV 287
LWTLPMFH GW+F W V T+ CLRK D P ++ L+++ +TH AP V
Sbjct: 249 QGRCRYLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKIDYPEIWRLLKQEHITHFNAAPTV 308
Query: 288 LNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWK 347
LL ++ EA +L RPV++ A SPP + + +L H YG TE G +
Sbjct: 309 NTLLCAANEAGRLPRPVQVTVAASPPTPHLFEQMTNLNLHPVHVYGMTETYGPITKGYYM 368
Query: 348 PKWNKLPARERASLKARQGVRTIGLTEVDIVD---PE-TGLSVKRDGQTRGEIVMRGGSL 403
P+W++LPA E+ ARQG + V ++ PE T + V+RDG+ GEI G
Sbjct: 369 PQWDQLPAEEKYKKMARQGHGFVTSLPVRVIKTDVPEGTIIDVQRDGKEIGEIAFVGNIC 428
Query: 404 MLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVL 463
GY KDPEAT K G ++GD+ + HPDG ++I DR+KD+IISGGENISS +ES+L
Sbjct: 429 SRGYYKDPEATRKLFAGGVLHSGDLAVWHPDGAVQILDRAKDIIISGGENISSVALESML 488
Query: 464 YSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRAR--IPRYMV 521
+HP + EA VV PD W E P AFV++K G G K++I + + I ++MV
Sbjct: 489 VTHPDILEAGVVAVPDAHWGERPKAFVTVKQGKQIDG-----KEVIAWAKKHSAISKFMV 543
Query: 522 PKTVVFIDELPKTATGKVQKYVLGDIANSMSMS 554
P+ V + ELPKT+TGKV+K VL + A S +
Sbjct: 544 PREVEVVAELPKTSTGKVRKNVLREWAKGGSRT 576
>gi|67527910|ref|XP_661805.1| hypothetical protein AN4201.2 [Aspergillus nidulans FGSC A4]
gi|40740110|gb|EAA59300.1| hypothetical protein AN4201.2 [Aspergillus nidulans FGSC A4]
Length = 524
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 185/511 (36%), Positives = 272/511 (53%), Gaps = 20/511 (3%)
Query: 44 QTYRRCLQLASSLSSFGINPGHV-VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDART 102
+TY+ A L+ F G+ V ++ PN PA E F + +GA+ ++N RL
Sbjct: 19 RTYQETADRARGLAYFLKKHGYKRVGILCPNTPAFLESIFGIAAAGAVNVSVNYRLKEDD 78
Query: 103 ISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPP 162
I+ I HS+++++ D L ++S + +++L TD + P
Sbjct: 79 IAYIFTHSDAEIIIAD----KEYLPLLSAYRAAKPHVRVILDTDTDATEGQLAGPFDEAI 134
Query: 163 ADFVDTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSL 222
+ ++ + KG + S+ D + L YT GTT+ PKGV ++ ++ A+ ++
Sbjct: 135 LEGLNYDRDTGRKGWSALE-SQAASEDDVIALAYTSGTTARPKGVEYTHRGCYLAAMGNI 193
Query: 223 IDWVVPKQS---VLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVT 279
I+ + Q LWTLPMFH GW+F W V T+ CLRK D P ++ L+++ GVT
Sbjct: 194 IESGLNFQGRRCKYLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKIDYPQIWKLLKQEGVT 253
Query: 280 HMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAG 339
H AP V LL SSPEA+ L PV + A SPP + + L H YG TE G
Sbjct: 254 HFNAAPTVNTLLCSSPEAEPLPEPVHVTVAASPPTPHLFEQMTGLNLHPVHVYGMTETYG 313
Query: 340 VNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPE----TGLSVKRDGQTRGE 395
+ W LP +E+ + ARQG + V ++ E T + VK+DG+ GE
Sbjct: 314 PITKGYYMTAWENLPRKEKFARMARQGHGFLTSLPVRVIQTEVPEGTIIDVKQDGKEIGE 373
Query: 396 IVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENIS 455
IV G GY KDPEAT K G ++GD+ + HPDG ++I DR+KD+IISGGENIS
Sbjct: 374 IVFVGNICARGYYKDPEATRKLFAGGVLHSGDLAVWHPDGAIQILDRAKDIIISGGENIS 433
Query: 456 STEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR-- 513
S +ES+L +HP + EA VV PD W E P AFV++K G G KD++ + R
Sbjct: 434 SVALESMLVTHPDILEAGVVAVPDSHWGERPKAFVTVKPGRQLKG-----KDVVDWARNT 488
Query: 514 ARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
+ I ++MVP+ V + ELPKT+TGK++K VL
Sbjct: 489 SGISKFMVPREVEVVAELPKTSTGKLRKNVL 519
>gi|70990998|ref|XP_750348.1| AMP-binding domain protein [Aspergillus fumigatus Af293]
gi|66847980|gb|EAL88310.1| AMP-binding domain protein, putative [Aspergillus fumigatus Af293]
gi|159130822|gb|EDP55935.1| AMP-binding domain protein, putative [Aspergillus fumigatus A1163]
Length = 575
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 198/561 (35%), Positives = 292/561 (52%), Gaps = 31/561 (5%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTT-----YTWSQTYRRCLQLASSLSSFGINPG 64
N L+P F+ RAA D +I + T+ +T R LA L G
Sbjct: 30 NYHTLSPTFFLPRAAAIEPDAEAIYHVTANKQVLRRTYIETADRARGLAYYLKKHGFKR- 88
Query: 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V ++ PN PA E F + +GA+ +N RL I+ I HS++ ++ VD L
Sbjct: 89 --VGILCPNTPAFLESIFGIAAAGAVNIAVNYRLKEDDIAYIFTHSDADVIIVDKEYLPL 146
Query: 125 LLEVVSLFPPHSKTPKLVLITD-DKEISSSSSPPPRIPPADFVDTYE-NMLAKGDPQFSW 182
L + P++ +I D D + + P Y+ + AKG
Sbjct: 147 LQAY------RAAKPEIPVIVDTDTDSTEGQLSGPFDEAVLLGLKYDADTGAKGWDGLE- 199
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQS---VLLWTLPM 239
+ S+ D + L YT GTT+ PKGV ++ ++ A+ ++I+ + Q LWTLPM
Sbjct: 200 SQAASEDDVIALAYTSGTTARPKGVEFTHRGCYLAALANVIESGLNSQQGRCRYLWTLPM 259
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH GW+F W V T+ CLRK D P ++ L+++ +TH AP V LL ++ EA++
Sbjct: 260 FHAMGWTFPWAVTAVRGTHYCLRKIDYPEIWRLLKQEHITHFNAAPTVNTLLCAANEAER 319
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L RPV++ A SPP + + +L H YG TE G + P+W++LPA E+
Sbjct: 320 LPRPVQVTVAASPPTPHLFEQMTNLNLHPVHVYGMTETYGPITKGYYMPQWDQLPAEEKY 379
Query: 360 SLKARQGVRTIGLTEVDIVD---PE-TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
ARQG + V ++ PE T + V+RDG+ GEI G GY KDPEAT
Sbjct: 380 KKMARQGHGFVTSLPVRVIKTDVPEGTIIDVQRDGKEIGEIAFVGNICSRGYYKDPEATR 439
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
K G ++GD+ + HPDG ++I DR+KD+IISGGENISS +ES+L +HP + EA VV
Sbjct: 440 KLFAGGVLHSGDLAVWHPDGAVQILDRAKDIIISGGENISSVALESMLVTHPDILEAGVV 499
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPK 533
PD W E P AFV++K G G +++I + + + I ++MVP+ V + ELPK
Sbjct: 500 AVPDAHWGERPKAFVTVKQGKQIDG-----QEVIAWAKNNSAISKFMVPREVEVVAELPK 554
Query: 534 TATGKVQKYVLGDIANSMSMS 554
T+TGKV+K VL + A S +
Sbjct: 555 TSTGKVRKNVLREWAKRGSRT 575
>gi|365157193|ref|ZP_09353474.1| hypothetical protein HMPREF1015_00884 [Bacillus smithii 7_3_47FAA]
gi|363625927|gb|EHL76938.1| hypothetical protein HMPREF1015_00884 [Bacillus smithii 7_3_47FAA]
Length = 530
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 198/543 (36%), Positives = 286/543 (52%), Gaps = 41/543 (7%)
Query: 12 CPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RAA D +I +D T+ Q R QL+ L S GI G V+ +A
Sbjct: 3 VPLVLTDFLDRAAELYADKIGMINDDRYITYRQLKERVNQLSHGLYSLGIRKGDRVAYLA 62
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL------ 125
PN M E + + GAI +N RL +L HSESK++FVD L+
Sbjct: 63 PNTLEMLEGFYGIFQIGAIMVPLNIRLKPEDYLFMLNHSESKVLFVDQDLYHLIQPVKDR 122
Query: 126 LEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRP 185
L V H K +D++E D + +M + + RP
Sbjct: 123 LATVEHIIVHYKD------SDNEEFD--------------YDRWLSMFPTNEIE----RP 158
Query: 186 K-SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
+ + D L YT GTT PKGV+ ++ ++ A+ S+ V + LL LPMFH NG
Sbjct: 159 EIHEEDVCSLLYTSGTTGNPKGVMLTHRNNYLHALWSMHHLRVSDRDTLLHVLPMFHVNG 218
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDR 302
W + GAT V LRK DA T+F L++KH VT M AP VLN L E +++
Sbjct: 219 WGSPFYFTANGATQVALRKVDAKTIFDLVQKHRVTIMEMAPTVLNSLLQYNEKHHPIIEQ 278
Query: 303 PVRILTAGSPPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
VR++ AGS PP + R E+ LG+ YG TE +++ + + LP E+ +
Sbjct: 279 DVRVVIAGSAPPPSFVKRVENELGWEFIQVYGMTESTPLHLVSTVRSHLSHLPLEEQWRV 338
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
+A+ G IG V +V+ E G V R+G+ GE+V+R ++M GY K+ EAT + +++G
Sbjct: 339 RAKAGYPMIG-CRVKVVN-EHGEEVARNGKEIGELVIRSNAVMKGYWKNEEATMETIRNG 396
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
+TGD+G + GY++I DR KD+IISGGENISS E+E VLY HP V EAAV+ P
Sbjct: 397 WLHTGDMGTIDEYGYIDIVDRKKDIIISGGENISSIEVEGVLYEHPAVLEAAVIAVPHEK 456
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P AFV K TE+++I++ R+++ + V F++ELPKTA+GK+QK
Sbjct: 457 WGETPHAFVVKKPNE-----TVTEQELIEFSRSKLAHFKAITGVTFVEELPKTASGKIQK 511
Query: 542 YVL 544
+L
Sbjct: 512 VLL 514
>gi|358379023|gb|EHK16704.1| hypothetical protein TRIVIDRAFT_195594 [Trichoderma virens Gv29-8]
Length = 567
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 193/544 (35%), Positives = 289/544 (53%), Gaps = 33/544 (6%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTT-----YTWSQTYRRCLQLASSLSSFGINPGHVVS 68
L+P F+ERAA+ + +I + + T+ + R LA L G V
Sbjct: 28 LSPTFFLERAASIEPNAEAIYHITSNGAILHRTYQEFADRARGLAYYLKKHGFK---RVG 84
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
++APN PA E + +P +GA+ N RL I+ I + +E + VDH LL
Sbjct: 85 ILAPNTPAFLEAIYGIPAAGAVIAPANYRLKPDDIAYIFEFAEVDSIIVDHEYVHLL--- 141
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPAD--FVDTYENMLAKGDPQFSWVRPK 186
LF + PK+ LI D + ++ P D ++ A G+ ++ +
Sbjct: 142 -DLFK--ERHPKIPLIIDS---DTDATEGQLCGPFDEAVLEGLNYDRATGNAGWAGLHAH 195
Query: 187 S--DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLID-WVVPKQSVLLWTLPMFHNN 243
+ + D + + +T GTTS PKGVV + ++ A+ ++I+ + + LWTLPMFH
Sbjct: 196 ATNEDDMIAIPFTSGTTSRPKGVVFTNRGSYLAAMGNIIESGLNHGRCKYLWTLPMFHAI 255
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW+F W V NVCLRK D P ++ L+++ G+TH AP V LL ++ EA++L +
Sbjct: 256 GWTFPWAVVAVRGVNVCLRKIDYPLIWKLLKEQGITHFNAAPTVNTLLVAAKEAERLPQE 315
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
VR+ A SPP + + +L I H YG TE G C P+W+ LP +E+ + A
Sbjct: 316 VRVTVAASPPSGHLFEQMTNLNLIPVHVYGMTETYGPLTKCYVMPEWDDLPPQEKYAKMA 375
Query: 364 RQGVRTIGLTEVDIV--DPETG--LSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
RQG I + +V D G + V ++GQ GEIV G Y KDPEAT K +
Sbjct: 376 RQGHGFITSLPIRVVKQDQPGGVLVDVAKNGQEIGEIVFFGNLCAKEYYKDPEATRKLFE 435
Query: 420 DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++GD+ + HPDG +I DR+KD+IISGGENISS +ES+L HP + EA VV PD
Sbjct: 436 GGGLHSGDLAVWHPDGSAQILDRAKDIIISGGENISSVALESMLVQHPDILEAGVVSVPD 495
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPKTATG 537
W E P A+V++K G G +D+I + + + I ++MVP+ V + ELPKT+TG
Sbjct: 496 SHWGERPKAYVTVKEGKSLVG-----EDVINWAKHQSNISKFMVPREVEVVKELPKTSTG 550
Query: 538 KVQK 541
K++K
Sbjct: 551 KIKK 554
>gi|346327234|gb|EGX96830.1| AMP-binding domain protein [Cordyceps militaris CM01]
Length = 569
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 196/557 (35%), Positives = 288/557 (51%), Gaps = 29/557 (5%)
Query: 8 PANSCPLTPLGFIERAATACDDCPSIIYNDTT-----YTWSQTYRRCLQLASSLSSFGIN 62
PA+ L+P F+ERAA+ D ++++ ++ QT R LA L G+
Sbjct: 23 PAHIHHLSPTFFLERAASIEPDAEAVVHITANGVGLRRSYQQTADRARGLAYYLKKRGLK 82
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
V ++APN PA E + + +G + +N RL I+ IL+ +E + VD +
Sbjct: 83 R---VGILAPNTPAFLESLYGIVAAGGVIVPVNYRLKPDDIAYILEFAEVDSIIVDDEFA 139
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
LL S HSK P +V D + S P ++ +G +S
Sbjct: 140 ELL---SSYRSKHSKVPIIV----DNDTDVVSGPQAGQYNQAVIEGLAYDAEQGSKGWSG 192
Query: 183 VRP--KSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPK-QSVLLWTLPM 239
+ +++ D + + +T GTTS PKGVV ++ ++ AV ++I+ + + + LWTLPM
Sbjct: 193 LHAHAENEDDMLAIPFTSGTTSKPKGVVYTHRGAYLAAVANIIESGLNQGRCKYLWTLPM 252
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH GW+F W V NVCLRK D PT++ L+++ GVTH AP V LL ++ EA +
Sbjct: 253 FHACGWTFPWSIVAVRGVNVCLRKIDYPTIWRLLKEEGVTHFNAAPTVNTLLVAAKEASK 312
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L PV++ A SPP + + L + H YG TE G C P+W+ LP E+
Sbjct: 313 LPHPVQVTVAASPPTGHLFEQMTKLNLMPVHVYGMTETYGPITKCYTMPEWDTLPPAEKY 372
Query: 360 SLKARQGVRTIGLTEVDIV--DPETG--LSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
+ ARQG I + I+ D G + V ++G+ GEIV G Y KD AT
Sbjct: 373 AKMARQGHGFITSLPIRIIKQDQPDGVLIDVAKNGKEIGEIVFFGNICAKEYYKDAAATR 432
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
G ++GD+ + HPDG +I DR+KD+IISGGENISS +ES+L HP V E VV
Sbjct: 433 TLFAGGALHSGDLAVWHPDGSAQILDRAKDIIISGGENISSVALESMLVQHPDVLECGVV 492
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRAR--IPRYMVPKTVVFIDELPK 533
P W E+P A+V++K G G D+I + R I R+MVPK V + +LPK
Sbjct: 493 AVPSEQWGEVPKAYVTVKEGKALQGA-----DLIAWARGNSAISRFMVPKEVEVVPDLPK 547
Query: 534 TATGKVQKYVLGDIANS 550
T+TGK++K L D A +
Sbjct: 548 TSTGKIKKNDLRDWAKN 564
>gi|400602653|gb|EJP70255.1| AMP-binding enzyme [Beauveria bassiana ARSEF 2860]
Length = 568
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 193/563 (34%), Positives = 288/563 (51%), Gaps = 37/563 (6%)
Query: 6 PNPANSCPLTPLGFIERAATACDDCPSIIYNDTT-----YTWSQTYRRCLQLASSLSSFG 60
P PA+ L+P F+ERAA+ + ++++ ++ QT R LA L G
Sbjct: 20 PPPAHIHHLSPTIFLERAASIEPNADAVVHITANGVSIRRSYQQTADRARGLAYHLKKHG 79
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
+ V ++APN PA E + + +G + N RL I+ + + +E + VD
Sbjct: 80 LKR---VGILAPNTPAFLESLYGIVAAGGVIVPANYRLKPDDIAYVFEFAEVDSIIVDKE 136
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
LL S HSK P +++ +D ++ + + LA Q
Sbjct: 137 FEDLLSAYRS---KHSKVP--IIVDNDTDVITGPQA------GQYNQAVMEGLAYDAEQG 185
Query: 181 S--WV----RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPK-QSVL 233
+ W +++ D + + +T GTTS PKGVV ++ ++ AV ++I+ + + +
Sbjct: 186 AKGWAGLHAHAENEDDMLAIPFTSGTTSKPKGVVYTHRGAYLAAVANIIESGLNQGRCKY 245
Query: 234 LWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSS 293
LWTLPMFH GW+F W V NVCLRK D P ++ L++ GVTH AP V LL +
Sbjct: 246 LWTLPMFHACGWTFPWSVVAVRGVNVCLRKIDYPIIWRLLKDEGVTHFNAAPTVNTLLVA 305
Query: 294 SPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKL 353
+ EA +L +PVR+ A SPP + + L I H YG TE G C P+W+ L
Sbjct: 306 AKEAAKLPQPVRVTVAASPPTGHLFEQMTDLNLIPVHVYGMTETYGPITKCYTLPEWDNL 365
Query: 354 PARERASLKARQGVRTIGLTEVDIVDPETG----LSVKRDGQTRGEIVMRGGSLMLGYLK 409
P E+ + ARQG I + I+ P+ + V +DG+ GEIV G Y K
Sbjct: 366 PPAEKYAKMARQGHGFITSLPIRIIKPDQPEDVLIDVAKDGKEIGEIVFFGNICAKEYYK 425
Query: 410 DPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMV 469
D AT K G ++GD+ + HPDG +I DR+KD+IISGGENISS +ES+L HP V
Sbjct: 426 DAAATKKLFAGGALHSGDLAVWHPDGSAQILDRAKDIIISGGENISSVALESMLVQHPDV 485
Query: 470 NEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVF 527
E VV P W E+P A+++++ G G D+I + R A I R+MVPK V
Sbjct: 486 LECGVVAVPSAQWGEVPKAYITVREGRSMQGA-----DLIAWARGNAAISRFMVPKEVEV 540
Query: 528 IDELPKTATGKVQKYVLGDIANS 550
+ +LPKT+TGK++K L + A +
Sbjct: 541 VPDLPKTSTGKIKKNDLREWARN 563
>gi|451847126|gb|EMD60434.1| hypothetical protein COCSADRAFT_98455 [Cochliobolus sativus ND90Pr]
Length = 587
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 196/555 (35%), Positives = 295/555 (53%), Gaps = 29/555 (5%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTT-----YTWSQTYRRCLQLASSLSSFGINPG 64
N L+P F+ RAA D +I + ++++ R LA L G
Sbjct: 40 NFHTLSPTWFLWRAAQIEPDALAIYHKTANNQILRRSYAEAADRARGLAYYLKKHGYKR- 98
Query: 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V ++A N PA E F + +GA+ IN RL IS I +HS+ ++ D
Sbjct: 99 --VGILATNTPAFLESIFGIAAAGAVNVAINYRLKPDDISYIFQHSDVDMIIAD------ 150
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV- 183
E VSL + KT V I D ++ ++ ++ + + +G + +
Sbjct: 151 -AEFVSLLDDYKKTKPDVPILVDTDMDATEGELSGPFDDAVLEGLKYDIEQGGKGWENLE 209
Query: 184 -RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQS---VLLWTLPM 239
K++ D + L YT GTT+ PKGV ++ ++ A+ ++I+ + S LWTLPM
Sbjct: 210 SHAKNEEDVIALAYTSGTTARPKGVEYTHRGVYLAAMGNIIESGLNYHSGRAKYLWTLPM 269
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH GW+F W V T+ CLRK D P ++ L+++ G+TH AP V LL ++ EA++
Sbjct: 270 FHATGWTFPWSVTAVRGTHYCLRKIDYPEIWRLLKEEGITHFNAAPTVNTLLCAAKEAER 329
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L PVR+ A SPP A + + +L H YG TE G P+W+ LP +E+
Sbjct: 330 LPHPVRVTVAASPPSAWLFEQMSNLNLNPVHVYGLTETYGPITKGYHVPEWDTLPDKEKY 389
Query: 360 SLKARQGVRTIGLTEVDIVDPE--TGL--SVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
S ARQG I + ++ PE G+ +V+++G+ GEI+ G GY KD EAT
Sbjct: 390 SRMARQGHGFIVAKALRVIKPEQPAGILTNVEKNGEEIGEIIFEGNICAKGYYKDAEATR 449
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
K + G +TGD+ + HPDG ++I DR+KD+IISGGENISS +E++L +HP + E V
Sbjct: 450 KLWEGGWLHTGDLAVWHPDGAIQILDRAKDIIISGGENISSVALEAMLSTHPAILEVGVC 509
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPK 533
PD W E P AFV+ K G++S T ++IQ+ + + I R+MVP+ VV + ELPK
Sbjct: 510 AVPDSHWGERPKAFVTTKDGSNS---ETLGAEVIQWAKENSHISRFMVPREVVVVRELPK 566
Query: 534 TATGKVQKYVLGDIA 548
T+TGK+QK VL + A
Sbjct: 567 TSTGKIQKNVLREWA 581
>gi|284164684|ref|YP_003402963.1| AMP-dependent synthetase and ligase [Haloterrigena turkmenica DSM
5511]
gi|284014339|gb|ADB60290.1| AMP-dependent synthetase and ligase [Haloterrigena turkmenica DSM
5511]
Length = 532
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 199/537 (37%), Positives = 285/537 (53%), Gaps = 40/537 (7%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
F+ERA + D ++ +D T YT+ + R +LA +L G+ G V+++APN
Sbjct: 10 FLERAVDSYGDVTGVVAHDGTEYTYEEVNDRVNRLAHALEDSGVEQGDRVALLAPNTHYF 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E +A GA+F +N RL + IL+ + + D+ + + + P +
Sbjct: 70 IETLYATNKLGAVFVPLNYRLVSGEYEYILEDCAANTIVADYDYAEKIEAIRDTIPADT- 128
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SDLDPMVLNY 196
V D EI + YE L +G P RP+ S+ D +NY
Sbjct: 129 ---FVGYRAD-EIEGEWAD------------YEEFL-EGQPTEEPDRPEISEDDDASINY 171
Query: 197 TWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGA 256
T GTT PKGVV+ ++ A+ + LWTLPMFH NGW T+ G
Sbjct: 172 TSGTTGDPKGVVRTHRTEHWHALVLNQHMEIRDDDTYLWTLPMFHCNGWGHTYAITGTGG 231
Query: 257 TNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAKQL----DRPVRILTAGS 311
T+VC R FDA VF +R++ V+ MCGAP VLN L+ E L DR VRI TAGS
Sbjct: 232 THVCQRTFDAAGVFERVREYDVSFMCGAPTVLNNLIQYHEEHPDLETTGDRDVRIATAGS 291
Query: 312 PPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTI 370
P + E G+ + H YG TE A + ++ + P+ +L R R LK +QG +T+
Sbjct: 292 APATATIETVEDEFGWRIIHIYGLTETAPI-ITTSNSPR--RLAERGR-ELKVKQGSQTL 347
Query: 371 GLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK---DGRYYTGD 427
T+V +VD E G V RDG+T GEIV+RG +M YL+ P+AT + +G ++TGD
Sbjct: 348 -CTDVRVVD-EDGADVPRDGETIGEIVVRGNQVMDRYLEKPDATEEAFTARLEGYFHTGD 405
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+ + DG + I+DR KD+IISGGENISS E+E VLY HP V +AAV+ P W E P
Sbjct: 406 LATIDEDGMVAIQDRKKDIIISGGENISSIEVEDVLYDHPDVGKAAVIPVPSEKWGETPK 465
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
A V ++G + TE +I+++ + Y P +V F+++LP+TATGKVQKY L
Sbjct: 466 ALVVPRSGAEP-----TEDEILEFVGEHLAGYKKPSSVDFVEDLPETATGKVQKYEL 517
>gi|295670796|ref|XP_002795945.1| 2-succinylbenzoate-CoA ligase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284078|gb|EEH39644.1| 2-succinylbenzoate-CoA ligase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 582
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 198/553 (35%), Positives = 300/553 (54%), Gaps = 35/553 (6%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIY---NDTTY--TWSQTYRRCLQLASSLSSFGINPG 64
N L+P F+ RAA+ D +I + N+ ++ +T R A L +G
Sbjct: 35 NRHALSPTFFLPRAASIEPDAEAIYHVTANNKVLRRSYIETADRARGFAYYLKKYGFKR- 93
Query: 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V ++ PN PA E FA+ +GA+ +N RL I+ I HSE++++ VD L
Sbjct: 94 --VGILCPNTPAFLESIFAIAAAGAVNVAVNYRLKPEDIAYIFNHSEAEVIIVDQEFLPL 151
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISS--SSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
L+E +P P L++ TD I S + DT A G +
Sbjct: 152 LVEFRKTYP---HIP-LIIDTDTDAIEGELSGQFDQAVLEGLNFDT-----ASGSHGWEG 202
Query: 183 VRPKS-DLDPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVP---KQSVLLWTL 237
++ ++ D D ++ L+YT GTTS PKGV +++ ++ + ++I+ + + LWTL
Sbjct: 203 LKAQTADEDALIALSYTSGTTSRPKGVEYIHRSCYLATLANIIESGLNYNRGRCRYLWTL 262
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
PMFH GW+F W V T+ CLRK D P ++ L+++ G+TH C AP V +L SS EA
Sbjct: 263 PMFHAMGWTFPWAVTAVRGTHYCLRKIDYPLIWKLLKEEGITHYCAAPTVNTILCSSKEA 322
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++L PVR+ A SPP + + +L H YG TE G + P+W+ +PA++
Sbjct: 323 EKLPSPVRVTVAASPPTPHLFEQMTNLNLHPVHVYGLTETYGPITKGYYLPEWDTIPAQD 382
Query: 358 RASLKARQGVRTIGLTEVDIVDPE----TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
+ ARQG + V ++ E T + V+++G+ GEIV G GY K+ E
Sbjct: 383 KYEKMARQGHGFLTSLPVRVIKTEVPEGTIIDVEKNGKEIGEIVFVGNICAKGYYKNVEE 442
Query: 414 TSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
T K G ++GD+ + HPDG ++I DR+KD+IISGGENISS +ES+L +HP + EA
Sbjct: 443 TKKLFSGGVLHSGDLAVWHPDGSIKILDRAKDIIISGGENISSIALESMLVTHPDILEAG 502
Query: 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDEL 531
VV PD W E P AF+++K+G GG KD+I++ + + I R+MVP+ V + EL
Sbjct: 503 VVAVPDSHWGERPKAFITVKSGKQLGG-----KDVIEWAKHVSGISRFMVPREVEVVPEL 557
Query: 532 PKTATGKVQKYVL 544
PKT+TGKV+K VL
Sbjct: 558 PKTSTGKVKKNVL 570
>gi|145255025|ref|XP_001398839.1| AMP-binding domain protein [Aspergillus niger CBS 513.88]
gi|134084426|emb|CAK97418.1| unnamed protein product [Aspergillus niger]
Length = 589
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 196/557 (35%), Positives = 282/557 (50%), Gaps = 25/557 (4%)
Query: 7 NPANSCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINPG- 64
N N L+P F++R+A D +I + +TY A L+ F G
Sbjct: 42 NKVNFHTLSPAYFLQRSAAIEPDAEAIYHITSDGQELRRTYLEFADRARGLAYFLKKRGF 101
Query: 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V ++ PN PA E F + +GA+ +N RL I+ I HSE++++ VD L
Sbjct: 102 KRVGILCPNTPAFLESIFGIGAAGAVNIAVNYRLKEDDIAYIFTHSEAEVIIVDKEFLPL 161
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
L P +TP +V D S P ++ + +A GD + +
Sbjct: 162 LRVYREAKP---ETPIIVDTDTDTAEGQLSGPFDEA----VLEGLKYDIATGDKGWEGLE 214
Query: 185 PK--SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDW---VVPKQSVLLWTLPM 239
+ S+ D + L YT GTTS PKGV + ++ A+ ++++ V + LW LPM
Sbjct: 215 SQAGSEDDVIALAYTSGTTSRPKGVEYTNRGAYLAALGNVVESGLNVFNGRCRYLWILPM 274
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH GW+F W T+ CLRK D ++ L + G+TH AP V LL + P+A++
Sbjct: 275 FHAVGWTFPWAVTAARGTHYCLRKVDYGQIWKLFKTEGITHFNAAPTVNTLLCNHPDAER 334
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L PV + AGSPP + + SL H YG TE G C P W++LP E+
Sbjct: 335 LSTPVIVQVAGSPPTPHLFEQMTSLNLRPVHVYGMTETYGPTTRCYMLPAWDQLPRDEKF 394
Query: 360 SLKARQGVRTIGLTEVDIVD---PE-TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
ARQG + ++ PE T + VKRDG+ GEI G GY KD EAT
Sbjct: 395 RRMARQGHGFLTSLPTRVIKTDVPEGTIIDVKRDGKEIGEIAFVGNICAQGYYKDAEATR 454
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
K G ++GD+ + HPDG ++I DR+KD+IISGGENISS +ES+L +HP + E VV
Sbjct: 455 KLFAGGVLHSGDLAVWHPDGAIQILDRAKDIIISGGENISSVALESMLVTHPDILEVGVV 514
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPK 533
PD W E P AFV+ K G G K++I + R ++I ++M+P+ V + ELPK
Sbjct: 515 AVPDTHWGERPKAFVTTKQGRHLEG-----KEVIDWARNQSQISKFMLPREVEVVAELPK 569
Query: 534 TATGKVQKYVLGDIANS 550
T+TGK++K VL D A
Sbjct: 570 TSTGKIRKNVLRDWAKG 586
>gi|299755750|ref|XP_001828861.2| AMP-dependent synthetase and ligase [Coprinopsis cinerea
okayama7#130]
gi|298411365|gb|EAU92868.2| AMP-dependent synthetase and ligase [Coprinopsis cinerea
okayama7#130]
Length = 556
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 198/554 (35%), Positives = 281/554 (50%), Gaps = 52/554 (9%)
Query: 8 PANSCPLTPLGFIERAATACDDCPSIIYNDT----TYTWSQTYRRCLQLASSLSSFGINP 63
PAN PL PL FI RAA + ++++ DT YT+S +R LA +L G+ P
Sbjct: 31 PANHQPLNPLSFILRAALIYPNKLALLHPDTPNPVAYTFSVWAQRIQNLAYALLKAGLKP 90
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
G V+VIAPN P + + H+ V + I INTRL ++ IL+HS + ++ VD+
Sbjct: 91 GDRVAVIAPNSPLIADAHYGVLAARGILLPINTRLKPHEVAYILEHSGASIILVDYEYKH 150
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP---QF 180
L+ T V++++D + D YE+ L +G +
Sbjct: 151 LI----------GNTNARVIVSNDTGRAG--------------DPYEDFLTEGRAYSNEQ 186
Query: 181 SWVRPKSDLDP---MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTL 237
W +++ D VL YT GTT PKG+ ++ A+ + + + K+S LW L
Sbjct: 187 GWRGLEAEPDENVGAVLCYTSGTTGRPKGIPL---GSYLGAIGNAFEGRINKESTYLWIL 243
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
PMFH GW++ W AT + LR + ++ + GVTH CGAP V + + P A
Sbjct: 244 PMFHAAGWTYPWATVFAFATQITLRTVNYTHIWNHLLHSGVTHYCGAPTVQIGIINDPLA 303
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++L RPV + AG+ P A ++ E G ++G +P W L +
Sbjct: 304 RKLSRPVTAIIAGAAPTAHLIAELEKKGINPTYGPFTRNYD--------QPHWASLSLED 355
Query: 358 RASLKARQGVRTIGLTEVDIV--DPETGL--SVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
RA L ARQG EV +V D E+ + V DG+T GEIV RG +M Y KDPEA
Sbjct: 356 RARLMARQGHAFATAEEVRVVKQDEESDVLEDVPADGKTLGEIVTRGNIVMKEYYKDPEA 415
Query: 414 TSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
T K + G + TGD+ +MHPDG + I DRSKD+IISGGEN SS IE L SHP V E +
Sbjct: 416 TKKAFRGGSFRTGDLAVMHPDGSVAIMDRSKDIIISGGENASSLAIEQELASHPHVLEVS 475
Query: 474 VVGRPDPFWQEIPCAFVSLKTGTDS---GGMMTTEKDIIQYCRARIPRYMVPKTVVFIDE 530
V+ R W E P AFV L G EKD+ + ++R+P + P+ V + E
Sbjct: 476 VIARQHLKWGERPMAFVILHPQHAEKWKGRYHEFEKDLKAHAKSRLPGFACPEWVEVVPE 535
Query: 531 LPKTATGKVQKYVL 544
LPKT+TGK+ K L
Sbjct: 536 LPKTSTGKILKTEL 549
>gi|340905328|gb|EGS17696.1| hypothetical protein CTHT_0070380 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 582
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 185/554 (33%), Positives = 288/554 (51%), Gaps = 18/554 (3%)
Query: 8 PANSCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINPG-H 65
P + L+P F+ERAA+ + ++ + + Y+ A L+ F
Sbjct: 27 PYHFSHLSPTYFLERAASIEPNAEAVYHVTANGRILRRNYQEVADRARGLAYFLRKHNLK 86
Query: 66 VVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL 125
V ++APN PA E + + +G + +N RL + I + +E + VD LL
Sbjct: 87 RVGILAPNTPAFLESIYGIVAAGGVIVPVNYRLKQEDVKYIFEFAEVDSIIVDKEFEGLL 146
Query: 126 LEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRP 185
+ + P T ++++ D + P + + + KG R
Sbjct: 147 QKFRAANP----TVRIIVDLDTDATEGALCGPYDEAVLEGLKYDQETGNKGWADLVSQRV 202
Query: 186 KSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVV---PKQSVLLWTLPMFHN 242
++ D + + +T GTTS PKGV+ ++ ++ A+ ++++ + ++ LWTLPMFH
Sbjct: 203 ANEDDLLAIPFTSGTTSKPKGVMYTHRGAYLAALANIVESGLNLPDRRCRYLWTLPMFHA 262
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
GW+F W V T+VCLRK D P ++ L+++ G+TH AP V LL + +A+ L
Sbjct: 263 VGWTFPWSVCAVRGTHVCLRKIDYPLIWRLLKQEGITHFNAAPTVNTLLCNHKDAEPLPH 322
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
PVR+ A SPP + + L + H YG TE G P+W +LP ER +
Sbjct: 323 PVRVTVAASPPTPALFEQMTKLNLLPVHVYGMTETYGPITRGYILPEWERLPGHERFANM 382
Query: 363 ARQGVRTIGLTEVDIV---DPE-TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
ARQG + V ++ PE + V+R+G+ GEIV +G GY KDPEAT K
Sbjct: 383 ARQGWGFLTSLPVRVIKTDQPEGVVVDVERNGKEIGEIVFQGNICCKGYYKDPEATRKLF 442
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
+ G ++GD+ + HPDG ++I+DR+KD+IISGGENISS +ES+L HP + EA VV P
Sbjct: 443 EGGVLHSGDLAVWHPDGSIQIQDRAKDIIISGGENISSVALESMLAEHPDILEAGVVAVP 502
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPKTAT 536
D W E P A+V++K G KDII + + + I ++MVP+ V F+ ELPKT+T
Sbjct: 503 DSHWGERPKAYVTIKEGHAKN---LRPKDIIDWAKNQSNISKFMVPREVEFVRELPKTST 559
Query: 537 GKVQKYVLGDIANS 550
GK++K VL + A
Sbjct: 560 GKIKKNVLREWAKK 573
>gi|448473402|ref|ZP_21601544.1| AMP-dependent synthetase and ligase [Halorubrum aidingense JCM
13560]
gi|445818914|gb|EMA68763.1| AMP-dependent synthetase and ligase [Halorubrum aidingense JCM
13560]
Length = 538
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 283/542 (52%), Gaps = 32/542 (5%)
Query: 13 PLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ D T YT+++ R + +++L + GI G V+V+
Sbjct: 4 PLLTTDFLDRARRHYGDEEAVLATDGTRYTYAELGDRADRFSAALQARGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL + +L + ++ D + + +
Sbjct: 64 PNTHYHLEAAYGTMQIGAVHTPLNYRLTPDNFAYMLSDAGVDAIYADAEYAGNIEAI--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
+ P +T+D + ++++ LA DP ++ RP+ D D
Sbjct: 121 ---RDEVPTETFLTNDTDAVDGD-----------WESFDEALADADPD-AYERPEMDEDE 165
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++A + A I + + V LWTLPMFH NGW +
Sbjct: 166 VITINYTSGTTGDPKGVCRTHRAETLHAYLITIHQEITDEDVYLWTLPMFHVNGWGHIYA 225
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL----SSSPEAKQLDRPVRI 306
+GA ++C R D VF +R GV++ C AP VLN+L + A + VR+
Sbjct: 226 ITGMGARHICTRGVDVAEVFDRVRGEGVSYFCAAPTVLNMLGDHHAEHGGATTGENDVRV 285
Query: 307 LTAGSPPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
TAG+ PP + ES G+ + H YG TE G V+ + + + + ER ++K Q
Sbjct: 286 ATAGAAPPEATIRTVESEFGWDLKHVYGATET-GPLVTTSDAKRHFEADSDERFAVKKTQ 344
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK---DGR 422
G+ +G T+V +VD E G V DG+T GEIV+RG +M Y PEAT + DG
Sbjct: 345 GIGYLG-TDVRVVD-ENGEDVAADGETIGEIVVRGNQVMDRYWNKPEATEEAFSERLDGY 402
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
Y+ GD+ ++ DG++ I+DR KD+IISGGENISS E+E L+ H +V++ AV+ PD W
Sbjct: 403 YHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDTLFEHDIVSDVAVIPAPDEQW 462
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E P AFV ++G D T +++ + R R+ Y P V F+ ELP TATGK+QKY
Sbjct: 463 GETPKAFVVPESG-DPDDAGATSEELRAFVRERVATYKTPGEVEFVAELPTTATGKIQKY 521
Query: 543 VL 544
L
Sbjct: 522 EL 523
>gi|350630651|gb|EHA19023.1| hypothetical protein ASPNIDRAFT_187366 [Aspergillus niger ATCC
1015]
Length = 589
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 196/559 (35%), Positives = 283/559 (50%), Gaps = 25/559 (4%)
Query: 5 KPNPANSCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINP 63
K N N L+P F++R+A D +I + +TY A L+ F
Sbjct: 40 KNNKVNFHTLSPAYFLQRSAAIEPDAEAIYHITSDGQELRRTYLEFADRARGLAYFLKKR 99
Query: 64 G-HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G V ++ PN PA E F + +GA+ +N RL I+ I HSE++++ VD
Sbjct: 100 GFKRVGILCPNTPAFLESIFGIGAAGAVNIAVNYRLKEDDIAYIFTHSEAEVIIVDKEFL 159
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
LL P +TP +V D S P ++ + +A G+ +
Sbjct: 160 PLLRVYRDAKP---ETPIIVDTDTDAAEGQLSGPFDEA----VLEGLKYDIATGNKGWEG 212
Query: 183 VRPK--SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDW---VVPKQSVLLWTL 237
+ + S+ D + L YT GTTS PKGV + ++ A+ ++++ V + LW L
Sbjct: 213 LESQAGSEDDVIALAYTSGTTSRPKGVEYTNRGAYLAALGNVVESGLNVFNGRCRYLWIL 272
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
PMFH GW+F W T+ CLRK D ++ L + G+TH AP V LL + P+A
Sbjct: 273 PMFHAVGWTFPWAVTAARGTHYCLRKVDYGQIWKLFKTEGITHFNAAPTVNTLLCNHPDA 332
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++L PV + AGSPP + + SL H YG TE G C P W++LP E
Sbjct: 333 ERLSTPVIVQVAGSPPTPHLFEQMTSLNLRPVHVYGMTETYGPTTRCYMLPAWDQLPRDE 392
Query: 358 RASLKARQGVRTIGLTEVDIVD---PE-TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
+ ARQG + ++ PE T + VKRDG+ GEI G GY KD EA
Sbjct: 393 KFRRMARQGHGFLTSLPTRVIKTDVPEGTIIDVKRDGKEIGEIAFVGNICAQGYYKDAEA 452
Query: 414 TSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
T K G ++GD+ + HPDG ++I DR+KD+IISGGENISS +ES+L +HP + E
Sbjct: 453 TRKLFAGGVLHSGDLAVWHPDGAIQILDRAKDIIISGGENISSVALESMLVTHPDILEVG 512
Query: 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDEL 531
VV PD W E P AFV+ K G G K++I + R ++I ++M+P+ V + EL
Sbjct: 513 VVAVPDTHWGERPKAFVTTKQGRHLEG-----KEVIDWARNQSQISKFMLPREVEVVAEL 567
Query: 532 PKTATGKVQKYVLGDIANS 550
PKT+TGK++K VL D A
Sbjct: 568 PKTSTGKIRKNVLRDWAKG 586
>gi|452208347|ref|YP_007488469.1| acyl-CoA synthetase [Natronomonas moolapensis 8.8.11]
gi|452084447|emb|CCQ37792.1| acyl-CoA synthetase [Natronomonas moolapensis 8.8.11]
Length = 531
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 199/538 (36%), Positives = 282/538 (52%), Gaps = 39/538 (7%)
Query: 17 LGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIP 75
L F++RA DD I+ +D T YT+++ R +LA++L+ GI G V+++APN
Sbjct: 8 LDFLDRAVDLYDDVTGIVAHDGTAYTYAELDDRVNRLANALAERGIEKGDAVALLAPNTH 67
Query: 76 AMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPH 135
E +A GA+F +N RL + + IL ++ +V D+ + + P
Sbjct: 68 YFIETLYATNTLGAVFVPMNYRLTSGELEYILGDCDADVVIADYDYAE------HVEPIR 121
Query: 136 SKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SDLDPMVL 194
P I RI D+ D YE +LA P+ + VRP+ S+ D +
Sbjct: 122 EAVPAEQFI---------GYESDRIE-GDW-DDYEAVLADASPE-APVRPEISEDDDASI 169
Query: 195 NYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVV 254
NYT GTT PKGVV+ ++ A+ + LWTLPMFH NGW T+
Sbjct: 170 NYTSGTTGDPKGVVRTHRTEHWHALVLNQHMEIRDDDNYLWTLPMFHCNGWGHTYAITGT 229
Query: 255 GATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL----DRPVRILTAG 310
G T+VC R FDA F +R++ V+ MCGAP VLN L E + DR VRI TAG
Sbjct: 230 GGTHVCQRTFDAEDTFERVREYDVSFMCGAPTVLNALIQHYETNDVETTGDRDVRIATAG 289
Query: 311 SPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRT 369
S P + E + + H YG TE A + ++ + P+ +L R R LK QG T
Sbjct: 290 SAPATATIETVEDEFDWRIIHIYGLTETAPI-ITTSNSPR--RLAERGR-DLKINQGSET 345
Query: 370 IGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYYTG 426
+ T+V +VD + G V +G T GEIV+RG +M YL PE T + + G ++TG
Sbjct: 346 L-CTDVRVVDRD-GNDVPANGATVGEIVVRGNQVMDRYLNKPEITEEAFNERIEGYFHTG 403
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+ + DG + I+DR KD+IISGGENISS E+E LY H + +AAV+ P W E P
Sbjct: 404 DLATIDEDGMVSIQDRKKDIIISGGENISSIEVEDALYDHEGILKAAVIPVPSEKWGETP 463
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
AFV + D TE+ +I + + R+ Y P +V F+D+ P+TATGKVQKY L
Sbjct: 464 KAFVVEQPDAD-----LTEEGVIGFVKGRLAGYKAPTSVEFVDDFPETATGKVQKYEL 516
>gi|310793169|gb|EFQ28630.1| AMP-binding enzyme [Glomerella graminicola M1.001]
Length = 574
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 202/570 (35%), Positives = 289/570 (50%), Gaps = 49/570 (8%)
Query: 5 KPNPANSC-PLTPLGFIERAATACDDCPSIIY---NDTTY--TWSQTYRRCLQLASSLSS 58
+P P + L+P F+ERAA D +I + N T ++ + R LA L
Sbjct: 25 EPQPKHHIHQLSPTFFLERAAAIEPDAEAIFHVTANGQTLRRSYMEFADRARGLAYYLKK 84
Query: 59 FGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVD 118
G+ V ++APN PA E F + +G + +N RL I+ I +E + VD
Sbjct: 85 HGLK---RVGILAPNTPAFLESIFGIAAAGGVNVGVNYRLKPDDITYIFDFAEVDSIIVD 141
Query: 119 HLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT------YENM 172
H LL E + H P +V D S P F D Y+++
Sbjct: 142 HEFVPLLDEFKA---KHPNVPFIVDTDTDATEGELSGP--------FDDAVLEGLQYDSL 190
Query: 173 LAKGDPQFSWVRPKSDL----DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVP 228
+G W S D + + +T GTTS PKGVV ++ ++ + ++I+ +
Sbjct: 191 HGQG-----WAGLHSQCGNEDDMLAIPFTSGTTSRPKGVVYTHRGAYLATMGNVIESGLN 245
Query: 229 KQS---VLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAP 285
+ LWTLPMFH GW+F W V T++CLRK D P ++ L+++ GVTH AP
Sbjct: 246 YHNGRCKFLWTLPMFHAVGWTFPWAVTAVRGTHICLRKIDYPLIWKLLKEEGVTHFNAAP 305
Query: 286 IVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCA 345
V LL SS EA++L R VR+ A SPP A + + +L H YG TE G
Sbjct: 306 TVNTLLCSSKEAEKLPREVRVTVAASPPSAHLFEQMMNLNLFPVHVYGMTETYGPITKGY 365
Query: 346 WKPKWNKLPARERASLKARQG---VRTIGLTEVDIVDPETGL-SVKRDGQTRGEIVMRGG 401
P W LP+ E+ + ARQG V ++ + V PE L V +DG+ GEIV G
Sbjct: 366 PMPSWETLPSSEKYAKMARQGHGFVTSLPIRIVKTDQPEGVLVDVAKDGKETGEIVFFGN 425
Query: 402 SLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIES 461
Y KDPEAT K G ++GD+ + HPDG +I DR+KD+IISGGENISS +E
Sbjct: 426 ICAKEYYKDPEATRKLFDGGALHSGDLAVWHPDGSAQILDRAKDIIISGGENISSVALEG 485
Query: 462 VLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRY 519
+L HP + EAAV+ PD W E P A+V++K G G +D+I + + + I ++
Sbjct: 486 MLVQHPDLLEAAVIAVPDSHWGERPKAYVTVKEGKTIKG-----EDLIIWAKHQSNISKF 540
Query: 520 MVPKTVVFIDELPKTATGKVQKYVLGDIAN 549
MVP+ V + ELPKT+TGK++K VL + A
Sbjct: 541 MVPREVEVVGELPKTSTGKLKKNVLREWAK 570
>gi|239606818|gb|EEQ83805.1| AMP-binding domain-containing protein [Ajellomyces dermatitidis
ER-3]
gi|327351287|gb|EGE80144.1| AMP-binding domain-containing protein [Ajellomyces dermatitidis
ATCC 18188]
Length = 581
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 195/561 (34%), Positives = 290/561 (51%), Gaps = 37/561 (6%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTT------YTWSQTYRRCLQLASSL 56
R +P N L+P F+ RAA A + IY+ T ++ +T R A L
Sbjct: 27 RETSHPFNRHTLSPTFFLPRAA-AIEPNAQAIYHVTANNKVLRRSYIETADRARGFAYYL 85
Query: 57 SSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVF 116
G V ++ PN PA E FA+ +G + +N RL I+ I HSE++++
Sbjct: 86 RKHGFKR---VGILCPNTPAFLESIFAIGAAGGVNVAVNYRLKPEDIAYIFNHSEAEVII 142
Query: 117 VDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPP--PRIPPADFVDTYENMLA 174
VD LL E F + L++ TD I S P + DT
Sbjct: 143 VDKEFVPLLDE----FKKTNGHVPLIIDTDTDAIEGELSGPFDQAVLEGLSFDT-----T 193
Query: 175 KGDPQFSWVRPKS-DLDPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPK--- 229
G+ + + ++ D D ++ L YT GTTS PKGV +++ ++ + ++I+ +
Sbjct: 194 SGNHGWQGLEAQTPDEDALIALAYTSGTTSRPKGVEYIHRSCYMATLANIIESGLNSSQG 253
Query: 230 QSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN 289
+ LWTLPMFH GW+F W V T+ CLRK D P ++ L+++ +TH C AP V
Sbjct: 254 RCRYLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKIDYPLIWKLLKEEDITHYCAAPTVNT 313
Query: 290 LLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPK 349
+L SS EA+ L PVR+ A SPP + + +L H YG TE G + P+
Sbjct: 314 ILCSSKEAEVLPNPVRVTVAASPPTPHLFEQMTNLNLHPVHVYGLTETYGPITKGYYLPQ 373
Query: 350 WNKLPARERASLKARQGVRTIGLTEVDIVDPE----TGLSVKRDGQTRGEIVMRGGSLML 405
W+ +P E+ ARQG + V ++ E T + V+++G+ GEIV G
Sbjct: 374 WDNIPTEEKYKKMARQGHGFLTSLPVRVIKTEVPEGTVIDVEKNGEEMGEIVFVGNICAR 433
Query: 406 GYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYS 465
GY K+ E T K G ++GD+ + HPDG ++I DR+KD+IISGGENISS +ES+L +
Sbjct: 434 GYYKNEEETKKLFSGGVLHSGDLAVWHPDGAIQILDRAKDIIISGGENISSVALESMLAT 493
Query: 466 HPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPK 523
HP + EA VV PD W E P AF+++ G G KD+I++ + + I R+MVP+
Sbjct: 494 HPDILEAGVVAVPDSHWGERPKAFITVHAGKQLEG-----KDVIEWAKHVSGISRFMVPR 548
Query: 524 TVVFIDELPKTATGKVQKYVL 544
V + ELPKT+TGK++K VL
Sbjct: 549 EVEVVRELPKTSTGKLKKNVL 569
>gi|242784714|ref|XP_002480446.1| AMP-binding domain protein, putative [Talaromyces stipitatus ATCC
10500]
gi|218720593|gb|EED20012.1| AMP-binding domain protein, putative [Talaromyces stipitatus ATCC
10500]
Length = 576
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 197/553 (35%), Positives = 285/553 (51%), Gaps = 27/553 (4%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIY---NDTTY--TWSQTYRRCLQLASSLSSFGINPG 64
N L+P F+ RAA D +I + N+ ++ +T R LA L
Sbjct: 30 NYHTLSPTSFLPRAAAIEPDAEAIYHLTANNKVLRRSYIETADRARGLAYYLKKRNFKR- 88
Query: 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V ++APN PA E F + +G + +N RL +S I +HS+++L+ VD SL
Sbjct: 89 --VGILAPNTPAFLESIFGIAAAGCVNIAVNYRLKPEDVSYIFEHSDAELIIVDAEYVSL 146
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
L LF ++ TD S P + +D ++ AKG +
Sbjct: 147 L----DLFKSEHPNIPFLIDTDTDATEGELSGPFDAAILEGLDYDKDTGAKGWDALE-TQ 201
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVV---PKQSVLLWTLPMFH 241
+ + L YT GTT+ PKGV ++ ++ A+ ++I+ + + LWTLPMFH
Sbjct: 202 TTDENATIALAYTSGTTARPKGVEFSHRGSYLAAMANVIESGLNYHKGRCGYLWTLPMFH 261
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD 301
GW+F W V T+ CLRK D P ++ L++ VTH AP V LL ++ EA++L
Sbjct: 262 AIGWTFPWAVTAVRGTHYCLRKIDYPYIWYLLKNENVTHFNAAPTVNTLLCAAKEAERLP 321
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PVR+ A SPP A + + +L H YG TE G P W+ LP +E+
Sbjct: 322 EPVRVTVAASPPTAHLFEQMTNLNLHPVHVYGMTETYGPITKGYHMPVWDTLPDKEKYQK 381
Query: 362 KARQGVRTIGLTEVDIVD---PE-TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
ARQG I ++ PE T + V+R+G GEIV G GY KDP ATSK
Sbjct: 382 MARQGHGFITSLPARVIKMDVPEGTIVDVQRNGLELGEIVFEGNICAKGYYKDPVATSKL 441
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++GD+ + H DG ++I DR+KD+IISGGENISS +ES+L +HP + EA VV
Sbjct: 442 FAGGVLHSGDLAVWHEDGAIQIMDRAKDIIISGGENISSVALESMLANHPDILEAGVVAV 501
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPKTA 535
PD W E P AFV+++ G + G DII + + + I ++MVP+ V + ELPKT+
Sbjct: 502 PDSHWGERPKAFVTVQAGKNVKG-----SDIIAWAKTASGISKFMVPREVEVVPELPKTS 556
Query: 536 TGKVQKYVLGDIA 548
TGKV+K VL + A
Sbjct: 557 TGKVKKNVLREWA 569
>gi|336112927|ref|YP_004567694.1| AMP-dependent synthetase and ligase [Bacillus coagulans 2-6]
gi|335366357|gb|AEH52308.1| AMP-dependent synthetase and ligase [Bacillus coagulans 2-6]
Length = 530
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 194/543 (35%), Positives = 278/543 (51%), Gaps = 45/543 (8%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
+ PL F++RA ++ D +T+ + R QL+ L + GI G V+ +
Sbjct: 2 NVPLVLTEFLDRAVLLYGGKTAVYCGDRAFTYRELNGRVNQLSYGLKNLGIEKGDRVAYL 61
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL----- 125
APN M E + + GA+ +N RL IL HS SK++FVD L+
Sbjct: 62 APNTVEMLEGFYGIFQLGAVMVPLNIRLTPEDYRFILNHSGSKVLFVDQEMYHLIEPVKD 121
Query: 126 -LEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
LE V H K I D+ + R PP F
Sbjct: 122 ELETVEQIIIHYKEDDCAEIDYDRWLD-------RFPPDPF------------------- 155
Query: 185 PKSDLDP---MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
P++ LD L YT GTT PKGV+ ++ ++ A+ ++ V + V L LPMFH
Sbjct: 156 PRAGLDENDVCSLLYTSGTTGNPKGVMLTHRNNYLHALSAMHHLRVTDRDVYLHVLPMFH 215
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAK-Q 299
NGW + GAT+VCLRK A +F I +H VT + AP VLN LL + E
Sbjct: 216 VNGWGSPFYYTANGATHVCLRKPSAEAIFTEIIRHNVTVVHMAPTVLNSLLQYNAEHHPT 275
Query: 300 LDRPVRILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
+++ VR++ AG+ PP + R E LG+ YG TE + + + + L ++
Sbjct: 276 IEQDVRVVIAGAAPPPSFVERVEKELGWEFIQVYGMTESTPLTLVSVIRSQLGGLDHDKQ 335
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
L+A+ G IG ++V ++ E V DG+ GE+ +RG +MLGY K+PE T K +
Sbjct: 336 LRLRAKAGFPMIG-SDVRVLR-ENDEEVAHDGKEIGEVTVRGHGVMLGYWKNPEETMKTI 393
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
++GR YTGD+ + GY++I DR KD+IISGGENISS E+E VLY HP + EAAV+ P
Sbjct: 394 RNGRLYTGDMATVDEYGYIDIVDRKKDIIISGGENISSIEVEGVLYEHPDILEAAVIAVP 453
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
W E P AFV LK G + TE+DII++ R R+ + V F++ELPKTA+GK
Sbjct: 454 HEKWGETPHAFVVLKAGAAA-----TEEDIIRFSRERLAHFKAVTGVTFVEELPKTASGK 508
Query: 539 VQK 541
+QK
Sbjct: 509 IQK 511
>gi|212527812|ref|XP_002144063.1| AMP-binding domain protein, putative [Talaromyces marneffei ATCC
18224]
gi|210073461|gb|EEA27548.1| AMP-binding domain protein, putative [Talaromyces marneffei ATCC
18224]
Length = 577
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 198/553 (35%), Positives = 286/553 (51%), Gaps = 27/553 (4%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIY---NDTTY--TWSQTYRRCLQLASSLSSFGINPG 64
N L+P F+ RAA D +I + N+ ++ +T R LA L +
Sbjct: 31 NYHALSPTFFLPRAAAIEPDAEAIYHLTANNKVLRRSYIETADRARGLAYYLKKQNLKR- 89
Query: 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V ++APN PA E F + +G + +N RL IS I HS+++L+ VD SL
Sbjct: 90 --VGILAPNTPAFLESIFGIGAAGCVVIAVNYRLKPEDISYIFDHSDAELIIVDEEYVSL 147
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
L LF L++ TD S P + ++ N AKG +
Sbjct: 148 L----DLFRSEHPDVPLLVDTDTDATEGQLSGPFDAAILEGLEHDRNTGAKGWNGLEG-Q 202
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVV---PKQSVLLWTLPMFH 241
+ + L YT GTT+ PKGV ++ ++ A+ ++I+ + + LWTLPMFH
Sbjct: 203 AADENSTIALAYTSGTTARPKGVEYSHRGSYLAAMGNVIESGLNYHKGRCRYLWTLPMFH 262
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD 301
GW+F W V T+ CLRK D P ++ L++ +TH AP V LL ++ EA++L
Sbjct: 263 AMGWTFPWAITAVRGTHYCLRKIDYPYIWHLLKNEHITHFNAAPTVNTLLCAAKEAERLP 322
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PVR+ A SPP A + + +L H YG TE G P W+ LP +E+
Sbjct: 323 NPVRVTVAASPPSAHLFEQMTNLNLHPVHVYGMTETYGPITKGYHMPAWDTLPDKEKYQK 382
Query: 362 KARQGVRTIGLTEVDIVD---PE-TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
ARQG + V I+ PE T + V+R+G GEIV G GY KDP ATSK
Sbjct: 383 MARQGHGFVTSLPVRIIKTDAPEGTIVDVQRNGCELGEIVFEGNICAKGYYKDPIATSKL 442
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
+ G ++GD+ + H DG ++I DR+KD+IISGGENISS +ES+L +HP + EA VV
Sbjct: 443 FEGGVLHSGDLAVWHADGAIQIMDRAKDIIISGGENISSVALESMLVTHPDILEAGVVAV 502
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPKTA 535
PD W E P AFV+++ G G +II + + + I ++MVP+ V + ELPKT+
Sbjct: 503 PDSHWGERPKAFVTIQPGKHIEG-----SEIIAWAKTASGISKFMVPREVEVVPELPKTS 557
Query: 536 TGKVQKYVLGDIA 548
TGKV+K VL + A
Sbjct: 558 TGKVKKNVLREWA 570
>gi|448468905|ref|ZP_21600002.1| AMP-dependent synthetase and ligase [Halorubrum kocurii JCM 14978]
gi|445810015|gb|EMA60048.1| AMP-dependent synthetase and ligase [Halorubrum kocurii JCM 14978]
Length = 538
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 187/542 (34%), Positives = 278/542 (51%), Gaps = 32/542 (5%)
Query: 13 PLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ D T YT+++ R + +++L GI G V+V+
Sbjct: 4 PLLTTDFLDRARRHYADEEAVLATDGTRYTYAELGERADRFSAALQERGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GAI +N RL + +L + ++ D ++ + V
Sbjct: 64 PNTHYHLEAAYGAMQVGAIHTPLNYRLTPDDFAYMLSDAGVDAIYADAEYAATVEAV--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
+ P +T+D + ++++ LA DP+ + RP+ D D
Sbjct: 121 ---REEVPTETFLTNDADAVEGD-----------WESFDAALADADPE-GYERPEMDEDD 165
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++A + A I + V LWTLPMFH NGW +
Sbjct: 166 VITINYTSGTTGDPKGVCRTHRAETLHAYLITIHQEITDDDVYLWTLPMFHVNGWGHIYA 225
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL----SSSPEAKQLDRPVRI 306
+GA +VC R D VF IR V++ C AP VLN+L + A D VR
Sbjct: 226 ITGMGARHVCTRGVDVEAVFDRIRTEDVSYFCAAPTVLNMLGDHYAEHGGATTGDNDVRA 285
Query: 307 LTAG-SPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
TAG +PP A + E G+ + H YG TE + + K ++ A +R ++K Q
Sbjct: 286 ATAGAAPPEATIRTVEEEFGWELKHVYGATETGPLVTTSDAKRHFDA-DADDRFAVKKTQ 344
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK---DGR 422
G+ +G T+V +VD E G V DG+T GEIV+RG +M Y PEAT + +G
Sbjct: 345 GIGYLG-TDVRVVD-ENGEDVTADGETIGEIVVRGNQVMDRYWNKPEATEEAFSERLEGY 402
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
Y+ GD+ ++ DG++ I+DR KD+IISGGENISS E+E L+ H +V++ AV+ PD W
Sbjct: 403 YHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDTLFEHEVVSDVAVIPAPDERW 462
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E P AFV +TG D T ++ + R R+ Y P V F+ ELP TATGK+QKY
Sbjct: 463 GETPKAFVVPETG-DPDDAGATPDELRSFVRERVADYKTPGEVEFVAELPTTATGKIQKY 521
Query: 543 VL 544
L
Sbjct: 522 EL 523
>gi|429856406|gb|ELA31315.1| amp-binding domain-containing protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 578
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 185/550 (33%), Positives = 291/550 (52%), Gaps = 26/550 (4%)
Query: 14 LTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINPG-HVVSVIA 71
L+P F+ERAA D +I++ +TYR + A+ L+ + G V ++A
Sbjct: 36 LSPTYFLERAAAIEPDAEAIVHITANNKLLRRTYRDFAERATGLAYYLKKHGFQRVGILA 95
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN PA E F + ++G + +N RL + I+ I ++E + VD LL E
Sbjct: 96 PNTPAFLESIFGIALAGGVNVAVNYRLKSDDITYIFDYAEVDSIIVDQEFLHLLDEFKQS 155
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK--SDL 189
P + ++ TD I S P ++ + +G+ +F ++ +D
Sbjct: 156 HP----SVPFIIDTDTDAIEGELSGPFD---EAILEGLQFDQRQGNKRFDGLQSHCGNDD 208
Query: 190 DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVP----KQSVLLWTLPMFHNNGW 245
D + + +T GTTS PKGVV ++ ++ A+ ++I+ + ++ LWTLP+FH GW
Sbjct: 209 DMLAIPFTSGTTSRPKGVVYTHRGAYLAALGNVIESGLNSPDGRRCKYLWTLPLFHACGW 268
Query: 246 SFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVR 305
+F W +V T+ LRK D P ++ L+++ ++H AP V LL S+ EA++L +P R
Sbjct: 269 TFPWAVTMVRGTHYTLRKIDYPLIWKLLKEEEISHFNAAPTVNTLLCSAKEAEELPKPCR 328
Query: 306 ILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
+ A SPP + + +L I H YG TE G P W+ LP E+ + ARQ
Sbjct: 329 VTVAASPPSGYLFEQMTNLNLIPVHVYGMTETYGPITKGYHMPSWDSLPPNEKYAKMARQ 388
Query: 366 G---VRTIGLTEVDIVDPETGL-SVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDG 421
G + ++ + + PE L V +DG+ GEI+ +G Y KDPEAT K G
Sbjct: 389 GHGFLTSLPIRVIKQDQPEGVLIDVMKDGKEIGEIIFKGNICCKEYYKDPEATKKLFAGG 448
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
++GD+ +MH +G +I DR+KD+IISGGENISS +E +L HP + EAAVV PD
Sbjct: 449 FLHSGDLAVMHEEGAAQILDRAKDIIISGGENISSVALEGMLVQHPDLLEAAVVAIPDSH 508
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPKTATGKV 539
W E P A+V++K G +D+I + + + I ++M P+ V +DELPKT+TGK+
Sbjct: 509 WGERPKAYVTVKEGKS-----LQPEDLISWAKHQSNISKFMAPREVEVVDELPKTSTGKL 563
Query: 540 QKYVLGDIAN 549
+K VL + A
Sbjct: 564 KKNVLREWAK 573
>gi|353235870|emb|CCA67876.1| related to AMP-binding protein [Piriformospora indica DSM 11827]
Length = 561
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 205/570 (35%), Positives = 284/570 (49%), Gaps = 52/570 (9%)
Query: 3 RLKPNPA-NSCPLTPLGFIERAATACDDCPSIIYNDTT----YTWSQTYRRCLQLASSLS 57
+L P+ A N PL P+ FI RAA + ++ + + YT++ +R LA L
Sbjct: 23 QLAPSTAVNYTPLNPISFILRAALIYPNHVALSHRNVATPVEYTYAVWAQRVQNLAYGLI 82
Query: 58 SFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFV 117
GI PG V+VIAPN H V + A+ INTRL I IL HS +KLV V
Sbjct: 83 KAGIEPGDRVAVIAPNYA-----HNGVLAARAVLVCINTRLVKSDIEYILSHSGAKLVLV 137
Query: 118 DHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD 177
DH + L+ + P V+++ D + D YE L++G
Sbjct: 138 DHEYAGLVKDC----------PVPVIVSRDTGRAG--------------DPYETFLSEGR 173
Query: 178 PQFSWVR-------PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQ 230
+FS R + + LNYT GTT PKGV+ + ++ A+ + + +
Sbjct: 174 -RFSRERGWAGLQLEEEETANATLNYTSGTTGRPKGVMATLRGSYLAAISNAYESKLNIN 232
Query: 231 SVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNL 290
SV LW LPMFH +GW++ W A V +R D ++ GVTH CGAP V
Sbjct: 233 SVYLWVLPMFHASGWTYPWALTFAMAKQVTIRTVDYKAIWGHFLYSGVTHYCGAPTVQIS 292
Query: 291 LSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKW 350
+ +SPEAK+L P+ + AG+ P A +L E+L F V+H YG TE G +P++
Sbjct: 293 IVNSPEAKRLKTPITAVIAGAAPTAALLEALENLNFQVNHVYGLTETYGPFTRNYDRPEY 352
Query: 351 NKLPARERASLKARQGVRTIGLTEVDIV--DPET----GLSVKRDGQTRGEIVMRGGSLM 404
L ERA + +RQG EV +V D E GL + D GEIV RG +M
Sbjct: 353 KSLGLEERARILSRQGHAFAQADEVRVVQIDEEGKRKPGL-IDCDFMQPGEIVTRGNIVM 411
Query: 405 LGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLY 464
Y +DP+AT + + G + TGDV + PDG + I+DRSKD+IISGGEN SS IE L
Sbjct: 412 KEYYRDPKATEEAFRGGYFATGDVAVKFPDGSISIRDRSKDLIISGGENASSLAIEQELS 471
Query: 465 SHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDS---GGMMTTEKDIIQYCRARIPRYMV 521
HP V E +VV R W E AFV L G +KD+I + + ++P +
Sbjct: 472 LHPDVLEVSVVARKHEKWGERAMAFVILHQEAVQKWKGREDEFQKDLINFVKGKLPGFAQ 531
Query: 522 PKTVVFIDELPKTATGKVQKYVLGDIANSM 551
P V + ELPKT+TGK+QK VL A +
Sbjct: 532 PAWVECVSELPKTSTGKIQKTVLRQRAAKL 561
>gi|320588153|gb|EFX00628.1| AMP-binding domain protein [Grosmannia clavigera kw1407]
Length = 630
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 202/587 (34%), Positives = 298/587 (50%), Gaps = 61/587 (10%)
Query: 14 LTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINPGHV-VSVIA 71
LTP F+ERAA D +I++ T ++YR + A L+ + ++ G+ + ++A
Sbjct: 42 LTPTFFLERAAAIEPDAEAIVHITANGGTLRRSYRDFAERARGLAWYFMHHGYRRIGILA 101
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN PA E FA G + N RL I+ I ++ ++ D ++LL E
Sbjct: 102 PNTPAFLETIFAAGACGGVLVPANYRLTQGDIAYIFDFADVDIIVADAQFAALLTEGSGN 161
Query: 132 FPP-HSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGD-----PQFSW--- 182
F H+ P LV D ++ ++ A ++ +A G P W
Sbjct: 162 FAASHAGVPILV----DADMDATEGELRGAYDAAVMEGLRLEMAGGHHHEQGPGNGWAAL 217
Query: 183 ------VRPKSDLDP---MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVV------ 227
VR ++LD + + +T GTT+ PKGV ++ ++ A+ ++ + +
Sbjct: 218 RTAVAAVRGTAELDEDSVIAVPFTSGTTARPKGVEFTHRGAYLAALANVAEAGLNMTGAD 277
Query: 228 ------------PKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRK 275
P + LWTLP+FH GW++ W V T+VCLRK D ++ L+R+
Sbjct: 278 ESIMASGPETKDPGRCRYLWTLPLFHAVGWTYPWAVCAVRGTHVCLRKIDYALIWRLLRE 337
Query: 276 HGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKT 335
VTH AP V LL ++PEA +L RPV + A SPP A + + +L H YG T
Sbjct: 338 EAVTHFNAAPTVNTLLCAAPEATRLVRPVSVTVAASPPTAHLFEKMVNLNLRPVHVYGLT 397
Query: 336 EIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDP----ETGLS------ 385
E G P WN+LP E+ + ARQG + V ++ P E G +
Sbjct: 398 ETYGPITRGYVLPVWNQLPTHEKFARMARQGHGFLTSLPVRVIKPATESEAGTASRPLVE 457
Query: 386 -VKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSK 444
V RDGQT GEIV +G GY KDP AT+K G ++GD+ + H DG ++I DR+K
Sbjct: 458 DVPRDGQTIGEIVFQGNICARGYYKDPAATAKLFAGGVLHSGDLAVWHADGSIQILDRAK 517
Query: 445 DVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGT---DSGGM 501
D+IISGGENISS +ES L HP V EAAVV PD W E P AFV++++G D G
Sbjct: 518 DIIISGGENISSVALESTLVEHPDVLEAAVVAVPDSHWGERPKAFVTVRSGAAAFDPAGF 577
Query: 502 MTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIA 548
+ D +++ ++ I R+MVP+ V + ELPKT+TGK++K VL D A
Sbjct: 578 L----DWVKH-QSGISRFMVPREVEAVVELPKTSTGKLKKTVLRDWA 619
>gi|448304481|ref|ZP_21494419.1| AMP-dependent synthetase and ligase [Natronorubrum sulfidifaciens
JCM 14089]
gi|445590914|gb|ELY45126.1| AMP-dependent synthetase and ligase [Natronorubrum sulfidifaciens
JCM 14089]
Length = 537
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 281/542 (51%), Gaps = 37/542 (6%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA T D ++I +T+ + R + +++L GI G V+V+
Sbjct: 4 PLLVPEFLDRARTHYGDSEAVIATTGERFTYDELGERADRFSAALQERGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + + +GAI +N RL + IL ++ ++ D+ + + V
Sbjct: 64 PNTHYHLEAAYGIMQTGAIHTPLNYRLTPDDFAYILSDADVDAIYADYEYAENIEAV--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P IT+D + ++++ +L ++ RP+ D D
Sbjct: 121 ---RDDVPTETFITNDVDAVEGE-----------WESFDAVLEDAGTEYD--RPEMDEDE 164
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++ I A ++ + V LWTLPMFH NGW +
Sbjct: 165 IITINYTSGTTGDPKGVCRTHRGETIHAYLTVAHQEISDDDVYLWTLPMFHANGWGHIFA 224
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL-----SSSPEAKQLDRPVR 305
+GAT+VC R DA +F +R+ V++MCGAP VLN+L PE D PVR
Sbjct: 225 VTGIGATHVCTRGIDAAEIFETVREEHVSYMCGAPTVLNMLVDYYIEHEPETTG-DAPVR 283
Query: 306 ILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
+ TAGS PP + E G+ + H YG TE G ++ + + + + +R +K R
Sbjct: 284 LATAGSAPPEATIRTVEDEFGWYLKHVYGATE-TGPLITTSDAGRLFEADSDDRFRIKKR 342
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---G 421
QG+ +G TE+ +VD E G + RD +T GE+V+RG +M Y P+AT + D G
Sbjct: 343 QGLAFLG-TEIRVVD-EDGNDIPRDDETLGEVVVRGNQIMEKYWGKPDATEEAFTDRIEG 400
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
Y+TGD+ + G + I+DR KD+IISGGENISS E+E L+ HP V++ AV+ P
Sbjct: 401 YYHTGDLATIDEHGMIAIQDRKKDIIISGGENISSIELEDTLFDHPEVSDVAVIPAPSEK 460
Query: 482 WQEIPCAFVSLKTGT-DSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E P AFV +G D G+ +E+D++ + R + Y + F+ ELP TATGKVQ
Sbjct: 461 WGETPKAFVVPTSGDPDEPGV--SEEDLVAFTRDNLAGYKTVHRIEFVAELPTTATGKVQ 518
Query: 541 KY 542
KY
Sbjct: 519 KY 520
>gi|297172468|gb|ADI23441.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [uncultured
gamma proteobacterium HF0770_33G18]
Length = 313
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 152/315 (48%), Positives = 206/315 (65%), Gaps = 7/315 (2%)
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL--SSSPE 296
MFH NGW F W V T+VCLRK DA +++ I +GVTH C AP++LNL+ +++ E
Sbjct: 1 MFHCNGWCFPWSLGAVAGTSVCLRKVDAVNIYSAIVDYGVTHFCAAPVILNLVVNAAAEE 60
Query: 297 AKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
+ L V ++TA +PPPA VL E GF ++H YG TE G V CAW +WN+LP
Sbjct: 61 KRALPHTVHVMTAAAPPPAAVLAAMEEAGFSMTHVYGLTETYGPAVICAWHREWNQLPLE 120
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
E+A +K+RQGV L E+ I++P+T V DG + GE + RG +M GYLK+ AT +
Sbjct: 121 EQAKIKSRQGVPYHALEELQILNPDTLQPVPADGSSMGEAMFRGNVVMKGYLKNSTATKE 180
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
G +++GD+G+ H D Y+++KDRSKD+IISGGEN+SS EIE VLY HP V EAAVV
Sbjct: 181 AFSGGWFHSGDLGVTHADRYIQLKDRSKDIIISGGENVSSIEIEDVLYKHPAVLEAAVVA 240
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
RPD W E PCAFV+LK D E+ +I++CR + Y PKT++F LPKT+T
Sbjct: 241 RPDNKWGETPCAFVTLKLSADH----VDERTLIEFCRNNMAHYKSPKTIIF-GSLPKTST 295
Query: 537 GKVQKYVLGDIANSM 551
GKVQK+ L + N++
Sbjct: 296 GKVQKFKLREQTNAL 310
>gi|358366767|dbj|GAA83387.1| AMP-binding domain protein [Aspergillus kawachii IFO 4308]
Length = 579
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 195/557 (35%), Positives = 284/557 (50%), Gaps = 33/557 (5%)
Query: 5 KPNPANSCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPG 64
K N N L+P F++R+A +I ++ T+ + R LA L G
Sbjct: 42 KNNKVNFHTLSPAYFLQRSA-------AIEPDELRRTYLEFADRARGLAYFLKKRGFKR- 93
Query: 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V ++ PN PA E F + +GA+ +N RL I+ I HSE++++ VD L
Sbjct: 94 --VGILCPNTPAFLESIFGIGAAGAVNIAVNYRLKEDDIAYIFTHSEAEVIIVDKEFLPL 151
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
L P +TP +V D S P ++ + +A G+ + ++
Sbjct: 152 LRVYREAKP---ETPIIVDTDTDAAEGQLSGPFDEA----VLEGLKYDIATGNKGWEGLQ 204
Query: 185 PK--SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDW---VVPKQSVLLWTLPM 239
+ S+ D + L YT GTTS PKGV + ++ A+ ++++ V + LW LPM
Sbjct: 205 AQAGSEDDVVALAYTSGTTSRPKGVEYTNRGAYLAALGNVVESGLNVFNGRCRYLWILPM 264
Query: 240 FHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ 299
FH GW+F W T+ CLRK D ++ L +K G+TH AP V LL + P+A+
Sbjct: 265 FHAVGWTFPWAVTAARGTHYCLRKVDYGQIWKLFKKEGITHFNAAPTVNTLLCNHPDAEP 324
Query: 300 LDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
L PV + AGSPP + + SL H YG TE G C P W++LP E+
Sbjct: 325 LSTPVIVQVAGSPPTPHLFEQMTSLNLRPVHVYGMTETYGPTTRCYMLPAWDQLPRDEKF 384
Query: 360 SLKARQGVRTIGLTEVDIVD---PE-TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
ARQG + ++ PE T + VK+DG+ GEI G GY KD EAT
Sbjct: 385 RRMARQGHGFLTSLPTRVIKTDVPEGTIIDVKQDGKEIGEIAFVGNICAKGYYKDAEATR 444
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
K G ++GD+ + HPDG ++I DR+KD+IISGGENISS +ES+L +HP + E VV
Sbjct: 445 KLFAGGVLHSGDLAVWHPDGAIQILDRAKDIIISGGENISSVALESMLVTHPDILEVGVV 504
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPK 533
PD W E P AFV+ K G G K++I + R ++I ++M+P+ V + ELPK
Sbjct: 505 AVPDTHWGERPKAFVTTKQGRHLEG-----KEVIDWARNQSQISKFMLPREVEVVAELPK 559
Query: 534 TATGKVQKYVLGDIANS 550
T+TGK++K VL D A
Sbjct: 560 TSTGKIRKNVLRDWAKG 576
>gi|225681569|gb|EEH19853.1| 2-succinylbenzoate-CoA ligase [Paracoccidioides brasiliensis Pb03]
Length = 587
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 197/553 (35%), Positives = 296/553 (53%), Gaps = 35/553 (6%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIY---NDTTY--TWSQTYRRCLQLASSLSSFGINPG 64
N L+P F+ RAA+ D +I + N+ ++ +T R A L G
Sbjct: 35 NRHALSPTFFLPRAASIEPDAEAIYHVTANNKVLRRSYIETADRARGFAYYLKKHGFKR- 93
Query: 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V ++ PN PA E FA+ +GA+ +N RL I+ I HSE++ + VD L
Sbjct: 94 --VGILCPNTPAFLESIFAIAAAGAVNVAVNYRLKPEDIAYIFNHSEAEAIIVDQEFLPL 151
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISS--SSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
L+E +P P L++ TD I S + DT A G+ +
Sbjct: 152 LVEFRKTYP---HIP-LIIDTDTDAIEGELSGQFDQAVLEGLNFDT-----ASGNHGWEG 202
Query: 183 VRPKS-DLDPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVP---KQSVLLWTL 237
+ ++ D D ++ L+YT GTTS PKGV +++ ++ + ++I+ + + LWTL
Sbjct: 203 LNAQTADEDALIALSYTSGTTSRPKGVEYIHRSCYLATLANIIESGLNYNRGRCRYLWTL 262
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
PMFH GW+F W V T+ CLRK D P ++ L+++ G+TH C AP V +L SS EA
Sbjct: 263 PMFHAMGWTFPWAVTAVRGTHYCLRKIDYPLIWKLLKEEGITHYCAAPTVNTILCSSKEA 322
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
+ L PVR+ A SPP + + +L H YG TE G + P+W+ +P ++
Sbjct: 323 EMLPSPVRVTVAASPPTPHLFEQMTNLNLHPVHVYGLTETYGPITKGYYLPEWDTIPEQD 382
Query: 358 RASLKARQGVRTIGLTEVDIVDPE----TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
+ ARQG + V ++ E T + V+++G+ GEIV G GY K+ E
Sbjct: 383 KYERMARQGYGFLTSLPVRVIKTEVPEGTIIDVEKNGKEIGEIVFVGNICAKGYYKNVEE 442
Query: 414 TSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
T K G ++GD+ + HPDG ++I DR+KD+IISGGENISS +ES+L +HP + EA
Sbjct: 443 TKKLFSGGVLHSGDLAVWHPDGSIKILDRAKDIIISGGENISSIALESMLVTHPDILEAG 502
Query: 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDEL 531
VV PD W E P AF+++K+G GG KD+I++ + + I R+MVP+ V + EL
Sbjct: 503 VVAVPDSHWGERPKAFITVKSGKQLGG-----KDVIEWAKHVSGISRFMVPREVEVVPEL 557
Query: 532 PKTATGKVQKYVL 544
PKT+TGKV+K VL
Sbjct: 558 PKTSTGKVKKNVL 570
>gi|452848316|gb|EME50248.1| hypothetical protein DOTSEDRAFT_68953 [Dothistroma septosporum
NZE10]
Length = 594
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 198/565 (35%), Positives = 286/565 (50%), Gaps = 51/565 (9%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTT-----YTWSQTYRRCLQLASSLSSFGINPGHVVS 68
L+P F+ RAA+ D + + T+ +T R LA L G V
Sbjct: 43 LSPTFFLPRAASIEPDAIATYHKTANGKILQRTYQETADRARGLAYYLKKHGFKR---VG 99
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
++ N PA E + + +GA+ IN RL I+ I H+E L+ VD LL
Sbjct: 100 ILCTNTPAFLESIYGIGGAGAVNVAINYRLKMDDITYIFDHAEVDLIIVDAEFRPLL--- 156
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQ--FSWVRPK 186
S H P ++ TD E + +F + D W +
Sbjct: 157 DSFKQSHPNVP-FIIDTDTDEDT-----------GEFDQCVLEGMQHDDRNGGRGWAGLE 204
Query: 187 SDL---DPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVV------PKQSVLLWT 236
+++ D M+ + YT GTTS PKGV +++ ++ + ++I+ + ++ LWT
Sbjct: 205 TEVPQEDSMIAIAYTSGTTSRPKGVEYTHRSAYLATLANVIESALNTAHPKAQRCHYLWT 264
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
LPMFH GW+F W V T+ CLRK + P ++ L+++ ++H AP V LL + P
Sbjct: 265 LPMFHAMGWTFPWAVTAVRGTHYCLRKIEYPYIWRLLKEEHISHYNAAPTVNTLLLADPN 324
Query: 297 AKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
A++L+ PVR+ A SPP A + E+ H YG TE G P W+ LP +
Sbjct: 325 AEKLEHPVRVTVAASPPSAHLFESMETHNLRPVHVYGLTETYGPITKGYMMPLWDNLPTK 384
Query: 357 ERASLKARQG--------VRTIGLTEVDIVD---PETGLSVKRDGQTRGEIVMRGGSLML 405
E+ + ARQG R I + D ET V+++GQ GEIV G
Sbjct: 385 EKYAKMARQGHGFITSLPARVIKTNQDDSGSWDASETVEDVEKNGQEIGEIVFIGNICAK 444
Query: 406 GYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYS 465
GY KDP AT K G ++GD+ + HPDG ++I DR+KD+IISGGENISS +E +L +
Sbjct: 445 GYYKDPAATRKLFAGGVQHSGDLAVWHPDGAIQILDRAKDIIISGGENISSVALEGLLMT 504
Query: 466 HPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPK 523
HP + EAA V D W E+P AF+++K G GGM T DIIQ+ R ++I R+MVPK
Sbjct: 505 HPDILEAACVAVQDKKWGEVPKAFITVKQGK-KGGM--TGDDIIQWARNQSQISRFMVPK 561
Query: 524 TVVFIDELPKTATGKVQKYVLGDIA 548
V +DELPKT+TGK++K VL D A
Sbjct: 562 EVEILDELPKTSTGKLRKNVLRDWA 586
>gi|226288712|gb|EEH44224.1| 2-succinylbenzoate-CoA ligase [Paracoccidioides brasiliensis Pb18]
Length = 582
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 197/553 (35%), Positives = 295/553 (53%), Gaps = 35/553 (6%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIY---NDTTY--TWSQTYRRCLQLASSLSSFGINPG 64
N L+P F+ RAA+ D +I + N+ ++ +T R A L G
Sbjct: 35 NRHALSPTFFLPRAASIEPDAEAIYHVTANNKVLRRSYIETADRARGFAYYLKKHGFKR- 93
Query: 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V ++ PN PA E FA+ +GA+ +N RL I+ I HSE++ + VD L
Sbjct: 94 --VGILCPNTPAFLESIFAIAAAGAVNVAVNYRLKPEDIAYIFNHSEAEAIIVDQEFLPL 151
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISS--SSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
L+E +P P L++ TD I S + DT A G +
Sbjct: 152 LVEFRKTYP---HIP-LIIDTDTDAIEGELSGQFDQAVLEGLNFDT-----ASGSHGWEG 202
Query: 183 VRPKS-DLDPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVP---KQSVLLWTL 237
+ ++ D D ++ L+YT GTTS PKGV +++ ++ + ++I+ + + LWTL
Sbjct: 203 LNAQTADEDALIALSYTSGTTSRPKGVEYIHRSCYLATLANIIESGLNYNRGRCRYLWTL 262
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
PMFH GW+F W V T+ CLRK D P ++ L+++ G+TH C AP V +L SS EA
Sbjct: 263 PMFHAMGWTFPWAVTAVRGTHYCLRKIDYPLIWKLLKEEGITHYCAAPTVNTILCSSKEA 322
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
+ L PVR+ A SPP + + +L H YG TE G + P+W+ +P ++
Sbjct: 323 EMLPSPVRVTVAASPPTPHLFEQMTNLNLHPVHVYGLTETYGPITKGYYLPEWDTIPEQD 382
Query: 358 RASLKARQGVRTIGLTEVDIVDPE----TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
+ ARQG + V ++ E T + V+++G+ GEIV G GY K+ E
Sbjct: 383 KYERMARQGYGFLTSLPVRVIKTEVPEGTIIDVEKNGKEIGEIVFVGNICAKGYYKNVEE 442
Query: 414 TSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
T K G ++GD+ + HPDG ++I DR+KD+IISGGENISS +ES+L +HP + EA
Sbjct: 443 TKKLFSGGVLHSGDLAVWHPDGSIKILDRAKDIIISGGENISSIALESMLVTHPDILEAG 502
Query: 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDEL 531
VV PD W E P AF+++K+G GG KD+I++ + + I R+MVP+ V + EL
Sbjct: 503 VVAVPDSHWGERPKAFITVKSGKQLGG-----KDVIEWAKHVSGISRFMVPREVEVVPEL 557
Query: 532 PKTATGKVQKYVL 544
PKT+TGKV+K VL
Sbjct: 558 PKTSTGKVKKNVL 570
>gi|255935213|ref|XP_002558633.1| Pc13g01890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583253|emb|CAP91258.1| Pc13g01890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 572
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 187/556 (33%), Positives = 289/556 (51%), Gaps = 37/556 (6%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTT------YTWSQTYRRCLQLASSLSSFGINP 63
N+ L+P F+ RAA A + IY+ T ++ +T R +A L G++
Sbjct: 27 NTHTLSPTFFLPRAA-AVEPNAEAIYHVTANNKILRRSYGETADRARGMAYYLKKHGLSR 85
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
V ++ PN PA E F + +GA+ +N RL I+ I H +++++ VD
Sbjct: 86 ---VGILCPNTPAFLESIFGIAAAGAVNIAVNYRLKQEDIAYIFDHGDAEVIIVDEEYVP 142
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPAD--FVDTYENMLAKGDPQFS 181
LL S+ P++ +I D + ++ P D ++ + + G +
Sbjct: 143 LLEHY------RSQHPRIPIIVD---TDTDATEGELTGPFDEAVLEGLRHDIDTGSRGWE 193
Query: 182 WVRPKS--DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVP---KQSVLLWT 236
+ ++ + + L YT GTT+ PKGV ++ ++ + ++I+ + ++ LWT
Sbjct: 194 GLESQAADEESTIALAYTSGTTARPKGVEFSHRGCYLATLGNVIETGLNYHRGRARYLWT 253
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
LPMFH GW+F W V T+ CLRK D P ++ L+++ +TH AP V LL ++ E
Sbjct: 254 LPMFHAMGWTFPWAVTAVRGTHYCLRKIDYPEIWRLLKEEHITHFNAAPTVNTLLCNAKE 313
Query: 297 AKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
A++L PVR+ A SPP + + L H YG TE G P+W++LP +
Sbjct: 314 AERLPEPVRVTVAASPPTPLLFEQMTDLNLHPVHVYGMTETYGPITKGYHLPEWDELPLK 373
Query: 357 ERASLKARQGVRTIGLTEVDIVDPE----TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPE 412
++ ARQG I ++ E T V++DGQ GEIV G GY KDPE
Sbjct: 374 DKYQRMARQGHGFITSLPARVIKTEVPAGTITDVRKDGQEIGEIVFVGNICARGYYKDPE 433
Query: 413 ATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEA 472
AT K G ++GD+ + HPDG ++I DR+KD+IISGGENISS +ES+L HP + EA
Sbjct: 434 ATRKLFAGGVLHSGDLAVWHPDGAIQILDRAKDIIISGGENISSVALESMLVMHPDILEA 493
Query: 473 AVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDE 530
VV PD W E P AFV++K G G D+I + R + I ++M+P+ V + E
Sbjct: 494 GVVAVPDSHWGERPKAFVTVKEGKSLQG-----SDLIDWARNTSGISKFMIPREVEVVTE 548
Query: 531 LPKTATGKVQKYVLGD 546
LPKT+TGK++K +L D
Sbjct: 549 LPKTSTGKIRKNILRD 564
>gi|326470920|gb|EGD94929.1| hypothetical protein TESG_02427 [Trichophyton tonsurans CBS 112818]
Length = 574
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 188/556 (33%), Positives = 289/556 (51%), Gaps = 25/556 (4%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINPGHV-V 67
N L+P F+ RAA D +I + +TY++ A L+ + G+ V
Sbjct: 28 NRHTLSPTFFLPRAAAIEPDAEAIYHVTANNKVVRKTYQQFADRARGLAYYIKKRGYRRV 87
Query: 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLE 127
++APN P E F + +GA+ IN RL A I+ I H++ + VD LL E
Sbjct: 88 GILAPNTPGFLESIFGIAAAGAVNVAINYRLKAEDIAYIFTHADVDSIIVDKEFVPLLDE 147
Query: 128 VVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKS 187
+P + LI D + + A ++ + +G P + + ++
Sbjct: 148 F------RKSSPHIPLIVDIDTHADEGELSGELDAA-IIEGLQQDEQQGGPGWDGLEAQA 200
Query: 188 -DLDPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSV---LLWTLPMFHN 242
D + ++ L YT GTT+ PKGV ++ ++ A+ ++I+ + Q LW LPMFH
Sbjct: 201 ADEESLIALAYTSGTTARPKGVEYIHRGCYLAALGNIIESGLNFQQGRCGYLWILPMFHA 260
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
GW+F W V T+ CLRK D P ++ ++++ +TH AP V LL ++ EA++L R
Sbjct: 261 MGWTFPWSITAVRGTHYCLRKIDYPEIWRMLKQENITHFNAAPTVNTLLCAAKEAERLSR 320
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
PVR+ A SPP A + + S+ H YG TE G P W+ +P +E+
Sbjct: 321 PVRVTVAASPPTAHLFEQMTSVNLHPVHVYGLTETYGPITKAYHMPLWDTIPLKEKYKRM 380
Query: 363 ARQGVRTIGLTEVDIVD---PE-TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
ARQG + V ++ PE T + V++DG+ GEIV G GY KD AT K
Sbjct: 381 ARQGHGFLTSMPVRVIKTDVPEGTIIDVRKDGKEIGEIVFTGNICARGYYKDTAATDKLF 440
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
G ++GD+ + HPDG ++I DR+KD+IISGGENISS +E++L +HP + EA VV
Sbjct: 441 AGGVLHSGDLAVWHPDGAVQILDRAKDIIISGGENISSVALEAMLATHPDILEAGVVAVS 500
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPKTAT 536
D W E P A+V+++ G G+ +II + + + I R+MVP+ V + ELPKT+T
Sbjct: 501 DVHWGERPKAYVTIQAGKQVTGL-----EIIAWAKNSSGISRFMVPREVEIVLELPKTST 555
Query: 537 GKVQKYVLGDIANSMS 552
GK++K VL + A S
Sbjct: 556 GKIKKNVLREWAKGAS 571
>gi|367026838|ref|XP_003662703.1| hypothetical protein MYCTH_2303657 [Myceliophthora thermophila ATCC
42464]
gi|347009972|gb|AEO57458.1| hypothetical protein MYCTH_2303657 [Myceliophthora thermophila ATCC
42464]
Length = 586
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 191/554 (34%), Positives = 287/554 (51%), Gaps = 20/554 (3%)
Query: 8 PANSCPLTPLGFIERAATACDDCPSIIYNDTT--YTWSQTYRRCLQLASSLSSFGINPGH 65
P + L+P F+ERAA A + +Y+ T ++Y A L+ + G+
Sbjct: 31 PPHLSHLSPTFFLERAA-AIEPRAEAVYHVTANGAILRRSYAELADRARGLAYYLRKKGY 89
Query: 66 V-VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V ++APN PA E F V +G + +N RL + IL+ +E V VD L
Sbjct: 90 RRVGILAPNTPAFLESIFGVVAAGGVLVPVNYRLKEEDVRYILEFAEVDCVIVDKEFEGL 149
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
L F ++++ D P + + + KG
Sbjct: 150 L----GGFRRAKPGVEVIVDLDTDATEGELCGPFDEAVLEGLRYDRDTGNKGWTDLVSQT 205
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLID--WVVPK-QSVLLWTLPMFH 241
++ D + + +T GTTS PKGV+ ++ ++ A+ ++++ VP + LWTLPMFH
Sbjct: 206 VANEDDMLAIPFTSGTTSKPKGVIYTHRGAYLAAMANIVESGLNVPDGRCKYLWTLPMFH 265
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD 301
GW+F W V T+VCLRK D ++ L+++ GVTH AP V LL + +A+ L
Sbjct: 266 AVGWTFPWSVCAVRGTHVCLRKVDYALIWRLLKEEGVTHFNAAPTVNTLLCAHKDAEVLP 325
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
RPVR+ A SPP A + + +L + H YG TE G P+W+ LP E+ +
Sbjct: 326 RPVRVTVAASPPTAHLFEQMTNLNLLPVHVYGLTETYGPITRGYLLPEWDSLPRHEKFAN 385
Query: 362 KARQGVRTIGLTEVDIV---DPETGL-SVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
ARQG + ++ PE L V RDG+ GEIV G GY KDPEAT K
Sbjct: 386 MARQGHGFLTALPARVIKADQPEGVLIDVARDGKEMGEIVFSGNICCKGYYKDPEATRKL 445
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++GD+ + HPDG ++I+DR+KD+IISGGENISS +ES+L HP + EA VV
Sbjct: 446 FAGGVLHSGDLAVWHPDGSIQIQDRAKDIIISGGENISSVALESMLVEHPAILEAGVVAV 505
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRAR--IPRYMVPKTVVFIDELPKTA 535
PD W E P A+V++K G+ + +++I++ R + I ++MVP+ V + ELPKT+
Sbjct: 506 PDSHWGERPKAYVTVKEGSST---TLRGQEVIEWARNQSAISKFMVPREVEIVRELPKTS 562
Query: 536 TGKVQKYVLGDIAN 549
TGK++K VL + A
Sbjct: 563 TGKIKKNVLREWAK 576
>gi|448315531|ref|ZP_21505179.1| AMP-dependent synthetase and ligase [Natronococcus jeotgali DSM
18795]
gi|445611704|gb|ELY65451.1| AMP-dependent synthetase and ligase [Natronococcus jeotgali DSM
18795]
Length = 547
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 186/543 (34%), Positives = 281/543 (51%), Gaps = 25/543 (4%)
Query: 13 PLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA T D +++ D +T+ + R + A++L GI G V+V+
Sbjct: 4 PLLVTEFLDRARTHYGDTEAVVGTDGERFTYDELGERADRFAAALQERGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN + GA+ +N RL + +L+ + V+ D+ + + E+
Sbjct: 64 PNTHYHLVAAYGSMQVGAVHTPLNYRLTPEDFAYMLEDAGVDAVYADYEYADRIEEIREA 123
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P + IT+D + + D +E +L P++ RP+ D
Sbjct: 124 VPTET------FITNDVDAVEGGRSSADGSDGAWED-FERVLEDASPEYD--RPEMHEDE 174
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++ I A + + V LWTLPMFH NGW +
Sbjct: 175 IITINYTSGTTGDPKGVCRTHRGETIHAYLVAVHQNLTDDDVYLWTLPMFHVNGWGHIYA 234
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD----RPVRI 306
+GA +VC R DA + IR+ V+++CGAP VLN+L ++ VRI
Sbjct: 235 VTGMGAKHVCTRGVDAEWLLETIREEDVSYLCGAPTVLNMLIDYYGENAVETTGANDVRI 294
Query: 307 LTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
TAGS PP L E G+ + H YG TE G ++ + + + + R ++K RQ
Sbjct: 295 ATAGSAPPEATLRTVEDEFGWYLKHVYGATE-TGPLITTSDARRHFEDDSDTRFAVKKRQ 353
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GR 422
G+ +G TEV +VD E G V RDG+T GE+V+RG +M Y PE T + D G
Sbjct: 354 GLGFMG-TEVRVVD-EDGEDVPRDGETLGEVVVRGNQVMERYWNKPEETEEAFSDRVEGY 411
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
++TGD+ + +G + I+DR KD+IISGGENISS E+E VL+ HP V++ AV+ P W
Sbjct: 412 FHTGDLATIDENGMIAIQDRKKDIIISGGENISSIELEDVLFDHPEVSDVAVIPSPSERW 471
Query: 483 QEIPCAFVSLKTGT-DSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
E P AFV ++G D G+ +E D++ + R R+ Y + + F+D LP TATGKVQK
Sbjct: 472 GETPKAFVVPESGEPDEPGV--SEDDLVAFTRERLANYKTVQCIEFVDVLPTTATGKVQK 529
Query: 542 YVL 544
Y L
Sbjct: 530 YEL 532
>gi|238503788|ref|XP_002383126.1| AMP-binding domain protein, putative [Aspergillus flavus NRRL3357]
gi|220690597|gb|EED46946.1| AMP-binding domain protein, putative [Aspergillus flavus NRRL3357]
Length = 569
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 199/560 (35%), Positives = 289/560 (51%), Gaps = 29/560 (5%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIY---NDTTY--TWSQTYRRCLQLASSLSSFGINPG 64
N L+P F+ RAA + +I + N+ T+++T R LA L G
Sbjct: 24 NFHTLSPTSFLPRAAAIEPEAVAIHHVTANNQVLRRTYAETADRARGLAYYLKKHGFKR- 82
Query: 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V V+ PN PA E F + +GA+ +N RL I+ I HS+ + + VD SL
Sbjct: 83 --VGVLCPNTPAFLESIFGIAAAGAVNVAVNYRLKEDDIAYIFTHSDVEAIIVDQEFLSL 140
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYE-NMLAKGDPQFSWV 183
L + P P +V + D S P + TY+ + AKG P
Sbjct: 141 LQSYRASRP---SIPIIVDMDTDATEGELSGPFDEVVLEGL--TYDLDTGAKGWPGLE-A 194
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQS---VLLWTLPMF 240
+ S+ D + L YT GTT+ PKGV ++ ++ A+ ++I+ + LWTLPMF
Sbjct: 195 QAASEDDVIALAYTSGTTARPKGVEYTHRGCYLAAMGNVIESGLNSHRGRCRYLWTLPMF 254
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H GW+F W V T+ CLRK D P ++ L+++ +TH AP V LL +S EA+ L
Sbjct: 255 HACGWTFPWAVTAVRGTHYCLRKIDYPQIWKLLKQEHITHFNAAPTVNTLLCNSKEAEPL 314
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
PV + A SPP + + +L H YG TE G + P W+ LP+ ER
Sbjct: 315 PEPVHVTVAASPPTPHLFEQMTNLNLHPVHVYGMTETYGPITKGYYLPAWDNLPSSERYK 374
Query: 361 LKARQGVRTIGLTEVDIVDPE----TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
ARQG + V ++ + T + V RDG+ GEIV G GY KDP+AT K
Sbjct: 375 KMARQGHGFVTSLPVRVIKTDVAEGTVIDVARDGKEIGEIVFVGNICARGYYKDPDATRK 434
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
G ++GD+ + H DG ++I+DR+KD+IISGGENISS +ES+L +HP + EA VV
Sbjct: 435 LFAGGVLHSGDLAVWHADGSIQIQDRAKDIIISGGENISSVALESMLVTHPDILEAGVVA 494
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPKT 534
PD W E P AFV++K G T ++I++ R + I ++M+P+ V + ELPKT
Sbjct: 495 VPDSHWGERPKAFVTVKPGK-----FLTGSEVIEWARNTSDISKFMIPREVEVVAELPKT 549
Query: 535 ATGKVQKYVLGDIANSMSMS 554
+TGKV+K +L D A + S
Sbjct: 550 STGKVRKNILRDWAKGANRS 569
>gi|169764941|ref|XP_001816942.1| AMP-binding domain protein [Aspergillus oryzae RIB40]
gi|83764796|dbj|BAE54940.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391863265|gb|EIT72576.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Aspergillus
oryzae 3.042]
Length = 569
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 199/560 (35%), Positives = 289/560 (51%), Gaps = 29/560 (5%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIY---NDTTY--TWSQTYRRCLQLASSLSSFGINPG 64
N L+P F+ RAA + +I + N+ T+++T R LA L G
Sbjct: 24 NFHTLSPTSFLPRAAAIEPEAVAIHHVTANNQVLRRTYAETADRARGLAYYLKKHGFKR- 82
Query: 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V V+ PN PA E F + +GA+ +N RL I+ I HS+ + + VD SL
Sbjct: 83 --VGVLCPNTPAFLESIFGIAAAGAVNVAVNYRLKEDDIAYIFTHSDVEAIIVDQEFLSL 140
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYE-NMLAKGDPQFSWV 183
L + P P +V + D S P + TY+ + AKG P
Sbjct: 141 LQSYRASRP---SIPIIVDMDTDATEGELSGPFDEVVLEGL--TYDLDTGAKGWPGLE-A 194
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQS---VLLWTLPMF 240
+ S+ D + L YT GTT+ PKGV ++ ++ A+ ++I+ + LWTLPMF
Sbjct: 195 QAASEDDVIALAYTSGTTARPKGVEYTHRGCYLAAMGNVIESGLNSHRGRCRYLWTLPMF 254
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H GW+F W V T+ CLRK D P ++ L+++ +TH AP V LL +S EA+ L
Sbjct: 255 HACGWTFPWAVTAVRGTHYCLRKIDYPQIWKLLKQEHITHFNAAPTVNTLLCNSKEAEPL 314
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
PV + A SPP + + +L H YG TE G + P W+ LP+ ER
Sbjct: 315 PEPVHVTVAASPPTPHLFEQMTNLNLHPVHVYGMTETYGPITKGYYLPAWDNLPSSERYK 374
Query: 361 LKARQGVRTIGLTEVDIVDPE----TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
ARQG + V ++ + T + V RDG+ GEIV G GY KDP+AT K
Sbjct: 375 KMARQGHGFVTSLPVRVIKTDVAEGTVIDVARDGKEIGEIVFVGNICARGYYKDPDATRK 434
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
G ++GD+ + H DG ++I+DR+KD+IISGGENISS +ES+L +HP + EA VV
Sbjct: 435 LFAGGVLHSGDLAVWHADGSIQIQDRAKDIIISGGENISSVALESMLVTHPDILEAGVVA 494
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPKT 534
PD W E P AFV++K G T ++I++ R + I ++M+P+ V + ELPKT
Sbjct: 495 VPDSHWGERPKAFVTVKPGK-----FLTGSEVIEWARNASDISKFMIPREVEVVAELPKT 549
Query: 535 ATGKVQKYVLGDIANSMSMS 554
+TGKV+K +L D A + S
Sbjct: 550 STGKVRKNILRDWAKGANRS 569
>gi|85078537|ref|XP_956182.1| hypothetical protein NCU00129 [Neurospora crassa OR74A]
gi|28917234|gb|EAA26946.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 573
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 180/507 (35%), Positives = 262/507 (51%), Gaps = 21/507 (4%)
Query: 48 RCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIIL 107
R LA L G V ++APN PA E + + +G + +N RL I+ I
Sbjct: 67 RARGLAYYLRKHGYK---RVGLLAPNTPAFLESVYGIVAAGGVIVPVNIRLKPEDITYIF 123
Query: 108 KHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSP-PPRIPPADFV 166
+E + D + LL S H P ++ + D + P +
Sbjct: 124 DFAEVDSIIADAEYAHLL---NSYKKEHPGVPVIIDVDTDATEGALCGPFDEAVMEGLNH 180
Query: 167 DTYENMLAKGDPQFSWVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDW- 225
D D Q V + D+ + + +T GTTS PKG V ++ ++ + ++I+
Sbjct: 181 DKATGSKGWADLQNQTVANEDDM--IAIPFTSGTTSKPKGCVYTHRGAYLATLANVIESG 238
Query: 226 --VVPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCG 283
V +S LWTLPMFH GW+F W V T+VCLRK D P ++ L+++ GVTH C
Sbjct: 239 LNVADGRSKYLWTLPMFHAMGWTFPWAVCAVRGTHVCLRKIDYPLIWKLLKEEGVTHFCA 298
Query: 284 APIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVS 343
AP V LL ++ EA+ L +PVR+ A SPP + + SL H YG TE G
Sbjct: 299 APTVNTLLCAAKEAEALPKPVRVTVAASPPTPHLFEQMTSLNLFPVHVYGLTETYGPITR 358
Query: 344 CAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPETG----LSVKRDGQTRGEIVMR 399
P W+ LP ++ + ARQG I I+ P+ + V+++GQ GEI+
Sbjct: 359 GYILPSWDNLPPHDKYAKMARQGHGFITSLPARIIKPDQPEGVLIDVEKNGQEVGEIIFT 418
Query: 400 GGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEI 459
G GY KDPEAT K G +TGD+ + HPDG + I+DR+KD+IISGGENISS +
Sbjct: 419 GNICCKGYYKDPEATRKLFAGGMLHTGDLAVWHPDGSIHIQDRAKDIIISGGENISSVAL 478
Query: 460 ESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIP 517
ES+L HP + EA VV PD W E P A+++LK G ++ T +D+I + + + I
Sbjct: 479 ESMLAEHPDILEAGVVAVPDSHWGERPKAYITLKEGRETS---LTGQDVIDWAKHNSSIS 535
Query: 518 RYMVPKTVVFIDELPKTATGKVQKYVL 544
++MVP+ V + ELPKT+TGK++K L
Sbjct: 536 KFMVPREVEIVKELPKTSTGKIKKNEL 562
>gi|410460905|ref|ZP_11314558.1| AMP-dependent synthetase and ligase [Bacillus azotoformans LMG
9581]
gi|409926110|gb|EKN63306.1| AMP-dependent synthetase and ligase [Bacillus azotoformans LMG
9581]
Length = 533
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 195/535 (36%), Positives = 280/535 (52%), Gaps = 30/535 (5%)
Query: 12 CPLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
P+ F++RA ++I D YT+S+ R QL+ L S G+ G V+ +
Sbjct: 3 VPMLLNDFLDRAVKLYGSKKAVINTDGREYTYSELNERVNQLSHGLQSLGVQKGDRVAYL 62
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVS 130
APN M E + V +GAI +NTRL IL HSE+K++ D L ++
Sbjct: 63 APNTLEMLEGFYGVFQTGAIMVPLNTRLTPEDYLFILNHSETKILVCD----QELYHQIA 118
Query: 131 LFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD-L 189
+T + VLI E + Y+ L++ + RP+ D
Sbjct: 119 PIREKLQTVESVLIHYADETCEDIN-------------YDQWLSRFSSN-RFDRPEMDEQ 164
Query: 190 DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTW 249
D L YT GTT PKGV+ ++ + A+ V + LL LPMFH NGW +
Sbjct: 165 DVCSLLYTSGTTGNPKGVMLTHRNNYFHALSVQHHLRVSDKDTLLHILPMFHVNGWGSPF 224
Query: 250 GAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ--LDRPVRIL 307
GAT V LRK T+ L++KH V+ M AP VLN L + K+ D VRI+
Sbjct: 225 YYTANGATQVMLRKIVPETIMDLVQKHKVSVMHMAPTVLNGLLQYYDQKKPTFDHDVRIV 284
Query: 308 TAGSPP-PAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
AGS P PA V E +G+ YG TE + +++ +P L ++ LKA+ G
Sbjct: 285 IAGSAPAPAFVTKVEEEIGWEFIQVYGMTESSPLSLFSPIRPHLEDLTKEQKYRLKAKAG 344
Query: 367 VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTG 426
++ IG EV +V+ + G V +GQ GE++ R S+M GY K+ +AT + ++DG +TG
Sbjct: 345 IQMIG-CEVKVVN-DLGDEVAWNGQEIGEVITRSNSVMKGYWKNEQATMETIQDGWLHTG 402
Query: 427 DVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIP 486
D+G + G +EI DR KD+IISGGENISS E+E VLY HP + EAAVV P W E P
Sbjct: 403 DMGTVDEYGTIEIVDRKKDIIISGGENISSIEVEGVLYEHPSILEAAVVALPHEKWGETP 462
Query: 487 CAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
AFV +K G+ TE+++IQ+ R+++ + V F+DELPKTA+GK+QK
Sbjct: 463 HAFVVVKE-----GVALTEEEVIQFSRSKLAHFKAVTGVTFVDELPKTASGKIQK 512
>gi|347751425|ref|YP_004858990.1| AMP-dependent synthetase/ligase [Bacillus coagulans 36D1]
gi|347583943|gb|AEP00210.1| AMP-dependent synthetase and ligase [Bacillus coagulans 36D1]
Length = 530
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 194/546 (35%), Positives = 276/546 (50%), Gaps = 45/546 (8%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
+ PL F++RA ++ D +T+ + R +L+ L + GI G V+ +
Sbjct: 2 NVPLVLTEFLDRAVLLYGGKTAVYCGDRAFTYRELNGRVNRLSYGLKNLGIEKGDRVAYL 61
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL----- 125
APN M E + + GA+ +N RL IL HS SK++FVD L+
Sbjct: 62 APNTVEMLEGFYGIFQLGAVMVPLNIRLTPEDYRFILNHSGSKVLFVDQEMYHLIEPVKD 121
Query: 126 -LEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
LE V H K I D+ + R PP F
Sbjct: 122 ELETVEQIIIHYKEDDCAEIDYDRWLD-------RFPPDPF------------------- 155
Query: 185 PKSDLDP---MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
P++ LD L YT GTT PKGV+ ++ ++ A+ ++ V + V L LPMFH
Sbjct: 156 PRAGLDENDVCSLLYTSGTTGNPKGVMLTHRNNYLHALSAMHHLRVTDRDVYLHVLPMFH 215
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAK-Q 299
NGW + GAT+VCLRK A +F I +H VT + AP VLN LL + E
Sbjct: 216 VNGWGSPFYYTANGATHVCLRKPSAEAIFTEIIRHNVTVVHMAPTVLNSLLQYNAEHHPA 275
Query: 300 LDRPVRILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
+++ VR++ AG+ PP + R E LG+ YG TE + + + + L +
Sbjct: 276 IEQDVRVVIAGAAPPPAFVERVEKELGWEFIQVYGMTESTPLTLVSVIRSQLGGLDRDTQ 335
Query: 359 ASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
L+A+ G IG ++V ++ E V DG+ GE+ +RG +MLGY K+PE T K +
Sbjct: 336 LRLRAKAGFPMIG-SDVRVLR-ENDEEVAHDGREIGEVTVRGHGVMLGYWKNPEETMKTI 393
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
++GR YTGD+ + GY++I DR KD+IISGGENISS E+E VLY HP V EAAV+ P
Sbjct: 394 RNGRLYTGDMATVDEYGYIDIVDRKKDIIISGGENISSIEVEGVLYEHPAVLEAAVIAVP 453
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
W E P AFV K + TE+DII++ R R+ + V F+DELPKTA+GK
Sbjct: 454 HEKWGETPHAFVVRKADAAA-----TEEDIIRFSRERLAHFKAVTGVTFVDELPKTASGK 508
Query: 539 VQKYVL 544
+QK L
Sbjct: 509 IQKVRL 514
>gi|326478482|gb|EGE02492.1| luciferin 4-monooxygenase [Trichophyton equinum CBS 127.97]
Length = 574
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 188/556 (33%), Positives = 288/556 (51%), Gaps = 25/556 (4%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINPGHV-V 67
N L+P F+ RAA D +I + +TY++ A L+ + G+ V
Sbjct: 28 NRHTLSPTFFLPRAAAIEPDAEAIYHVTANNKVVRKTYQQFADRARGLAYYIKKRGYRRV 87
Query: 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLE 127
++APN P E F + +GA+ IN RL A I+ I H++ + VD LL E
Sbjct: 88 GILAPNTPGFLESIFGIAAAGAVNVAINYRLKAEDIAYIFTHADVDSIIVDKEFVPLLDE 147
Query: 128 VVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKS 187
+P + LI D + + A ++ + +G P + + ++
Sbjct: 148 F------RKSSPHIPLIVDTDTHADEGELSGELDAA-IIEGLQQDEQQGGPGWDGLEAQA 200
Query: 188 -DLDPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSV---LLWTLPMFHN 242
D + ++ L YT GTT+ PKGV ++ ++ A+ ++I+ + Q LW LPMFH
Sbjct: 201 ADEESLIALAYTSGTTARPKGVEYIHRGCYLAALGNIIESGLNFQQGRCGYLWILPMFHA 260
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
GW+F W V T+ CLRK D P ++ ++++ +TH AP V LL ++ EA++L R
Sbjct: 261 MGWTFPWSITAVRGTHYCLRKIDYPEIWRMLKQENITHFNAAPTVNTLLCAAKEAERLSR 320
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
PVR+ A SPP A + + S+ H YG TE G P W+ +P +E+
Sbjct: 321 PVRVTVAASPPTAHLFEQMTSVNLHPVHVYGLTETYGPITKAYHMPLWDTIPLKEKYKRM 380
Query: 363 ARQGVRTIGLTEVDIVD---PE-TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
ARQG + V ++ PE T + V++DG+ GEIV G GY KD AT K
Sbjct: 381 ARQGHGFLTSMPVRVIKTDVPEGTIIDVRKDGKEIGEIVFTGNICARGYYKDTAATDKLF 440
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
G ++GD+ + HPDG ++I DR+KD+IISGGENISS +E++L +HP + EA VV
Sbjct: 441 AGGVLHSGDLAVWHPDGAVQILDRAKDIIISGGENISSVALEAMLATHPDILEAGVVAVS 500
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPKTAT 536
D W E P A+V+++ G G+ +II + + + I R MVP+ V + ELPKT+T
Sbjct: 501 DVHWGERPKAYVTIQAGKQVTGL-----EIIAWAKNSSGISRSMVPREVEIVLELPKTST 555
Query: 537 GKVQKYVLGDIANSMS 552
GK++K VL + A S
Sbjct: 556 GKIKKNVLREWAKGAS 571
>gi|448456128|ref|ZP_21594981.1| AMP-dependent synthetase and ligase [Halorubrum lipolyticum DSM
21995]
gi|445812963|gb|EMA62949.1| AMP-dependent synthetase and ligase [Halorubrum lipolyticum DSM
21995]
Length = 538
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 188/546 (34%), Positives = 280/546 (51%), Gaps = 40/546 (7%)
Query: 13 PLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ D T YT+++ R + +++L GI G V+V+
Sbjct: 4 PLLTTDFLDRARRHYADEEAVLATDGTRYTYAELGERADRFSAALQERGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GAI +N RL S +L + ++ D ++ + V
Sbjct: 64 PNTHYHLEAAYGAMQVGAIHTPLNYRLTPDDFSYMLSDAGVDAIYADAEYAANVEAV--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD----TYENMLAKGDPQFSWVRPKS 187
+ P +T+D AD VD +++ +LA DP + RP+
Sbjct: 121 ---RDEVPTETFLTND---------------ADAVDGDWESFDEVLADADPD-GYERPEM 161
Query: 188 DLDPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
D D ++ +NYT GTT PKGV + ++A + A I + V LWTLPMFH NGW
Sbjct: 162 DEDDVITINYTSGTTGDPKGVCRTHRAETLHAYLITIHQEITDDDVYLWTLPMFHVNGWG 221
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL----SSSPEAKQLDR 302
+ +GA ++C R D VF IR V++ C AP VLN+L + A
Sbjct: 222 HIYAITGMGARHICTRGVDVEAVFDRIRTEDVSYFCAAPTVLNMLGDHHAEHGGATTGAN 281
Query: 303 PVRILTAG-SPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
VR TAG +PP A + E G+ + H YG TE + + K ++ + +R ++
Sbjct: 282 EVRAATAGAAPPEATIRTVEEEFGWELKHVYGATETGPLVTTSDAKRHYDA-DSDDRFAV 340
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK-- 419
K QG+ +G T+V +VD E G V DG+T GEIV+RG +M Y PEAT +
Sbjct: 341 KKTQGIGYLG-TDVRVVD-ENGEDVAPDGETIGEIVVRGNQVMDRYWNKPEATEEAFSER 398
Query: 420 -DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
+G Y+ GD+ ++ DG++ I+DR KD+IISGGENISS E+E L+ H +V++ AV+ P
Sbjct: 399 LEGYYHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDTLFEHEVVSDVAVIPAP 458
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
D W E P AFV ++G D T +++ + R R+ Y P V F+ ELP TATGK
Sbjct: 459 DERWGETPKAFVVPESG-DPDDAGATPEELKSFVRERVADYKTPGEVEFVAELPTTATGK 517
Query: 539 VQKYVL 544
+QKY L
Sbjct: 518 IQKYEL 523
>gi|322370803|ref|ZP_08045359.1| AMP-dependent synthetase and ligase [Haladaptatus paucihalophilus
DX253]
gi|320549761|gb|EFW91419.1| AMP-dependent synthetase and ligase [Haladaptatus paucihalophilus
DX253]
Length = 532
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 194/548 (35%), Positives = 282/548 (51%), Gaps = 52/548 (9%)
Query: 14 LTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAP 72
+T + F++RA DD +I +D T YT+++ R LA+ L+ GI G V+++A
Sbjct: 5 MTTMDFLDRAVDLYDDVVGVIADDGTEYTYAEFNERVNSLANVLADRGIGQGDRVAMLAS 64
Query: 73 NIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLF 132
N E +A GA++ +N RL IL E+ +V D+ + + V
Sbjct: 65 NTHYFLEALYATNHLGAVYVPMNYRLVPENYEYILNDCEASVVIADYDFAEKVEAVRDSV 124
Query: 133 PPHSKTP-KLVLITDDKEI------SSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRP 185
P + + I D E +S+ PP R AD
Sbjct: 125 PAETFIGYEADEIDGDWEDYMTLVDEASADPPER---ADL-------------------- 161
Query: 186 KSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGW 245
S+ D +NYT GTT PKGVV+ ++ A+ + LWTLPMFH NGW
Sbjct: 162 -SEDDDASINYTSGTTGDPKGVVRTHRTEHWHALVLNQHMEIRDDDTYLWTLPMFHCNGW 220
Query: 246 SFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL----SSSPEAKQL- 300
T+ G T+VCLRKF IR H V+ MCGAP VLN + ++P+ +
Sbjct: 221 GHTYAITGTGGTHVCLRKFTPERTLGKIRNHDVSFMCGAPTVLNRVIAYKENNPDVETTG 280
Query: 301 DRPVRILTAGSPPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
DR +RI TAGS P + E + + + H YG TE A + ++ + P+ +L R R
Sbjct: 281 DRELRIATAGSAPATATIETVEDDISWRIIHIYGLTETAPI-ITTSNSPR--RLATRGR- 336
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
SLK +QG +G T+V +V + G V DGQT GE+V+RG +M YL PEAT +
Sbjct: 337 SLKVKQGSEVLG-TDVRVV-HDDGTDVPADGQTMGEVVVRGNQVMDRYLNKPEATEEAFN 394
Query: 420 D---GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
D G ++TGD+ + DG + I+DR KD+IISGGEN+SS E+E VLY HP + +AAV+
Sbjct: 395 DRISGYFHTGDLATIDEDGMISIQDRKKDIIISGGENVSSIEVEDVLYDHPEIAKAAVIP 454
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
P W E+ A V K G + ++ D+ +CR R+ Y +P+ ++ ++LP+TAT
Sbjct: 455 TPSDEWGELVTAVVVPKPGVE-----LSDADVEDFCRDRMAGYKIPRKILVQEDLPETAT 509
Query: 537 GKVQKYVL 544
GKVQKY L
Sbjct: 510 GKVQKYQL 517
>gi|448319627|ref|ZP_21509123.1| AMP-dependent synthetase and ligase [Natronococcus amylolyticus DSM
10524]
gi|445607620|gb|ELY61500.1| AMP-dependent synthetase and ligase [Natronococcus amylolyticus DSM
10524]
Length = 553
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 183/543 (33%), Positives = 280/543 (51%), Gaps = 19/543 (3%)
Query: 13 PLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA T + +++ D +T+ + R + A++L GI G V+V+
Sbjct: 4 PLLVTEFLDRARTHYGETEAVVGTDGERFTYDELGERADRFAAALQERGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN + +GA+ +N RL + IL+ + V+ D+ + + E+
Sbjct: 64 PNTHYHLAAAYGSMQAGAVHTPLNYRLTPDDFAYILEDAGVDAVYADYEYADRIEEIRDE 123
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P + V + E + D+ D +E +L P++ RP+ D
Sbjct: 124 VPTETFITNDVDAVEGGEAAEGGRSSSDSSDGDWED-FEQVLEDASPEYD--RPEMHEDE 180
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++ I A + + LWTLPMFH NGW +
Sbjct: 181 IITINYTSGTTGDPKGVCRTHRGETIHAYLVAVHQNLTDDDTYLWTLPMFHVNGWGHIYA 240
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD----RPVRI 306
+GA +VC R DA +F IR+ V+++CGAP VLN+L ++ VRI
Sbjct: 241 VTGMGAKHVCTRGVDAEWLFETIREEDVSYLCGAPTVLNMLIDYYGDNAVETTGANDVRI 300
Query: 307 LTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
TAGS PP L E G+ + H YG TE + + + ++ + R ++K RQ
Sbjct: 301 ATAGSAPPEATLRTVEDEFGWYLKHVYGATETGPLITTSDARRHFDD-DSDSRFAVKKRQ 359
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GR 422
G+ +G TEV +V E G V RDG+T GE+V++G +M Y PE T + D G
Sbjct: 360 GLGFMG-TEVRVV-GEDGEDVPRDGETLGEVVVQGNQVMEKYWNKPEETEEAFSDRVEGY 417
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
Y+TGD+ + +G + I+DR KD+IISGGENISS E+E L+ HP V++AAV+ P W
Sbjct: 418 YHTGDLATIDENGMIAIQDRKKDIIISGGENISSIELEDTLFDHPEVSDAAVIPSPSEQW 477
Query: 483 QEIPCAFVSLKTGT-DSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
E P AFV ++G D G+ +E D++ + R + Y + + F++ELP TATGKVQK
Sbjct: 478 GETPKAFVVPESGDPDEPGV--SEDDLVAFTREHLANYKTVQRIEFVEELPTTATGKVQK 535
Query: 542 YVL 544
Y L
Sbjct: 536 YEL 538
>gi|169622966|ref|XP_001804891.1| hypothetical protein SNOG_14709 [Phaeosphaeria nodorum SN15]
gi|160704884|gb|EAT77901.2| hypothetical protein SNOG_14709 [Phaeosphaeria nodorum SN15]
Length = 585
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 189/554 (34%), Positives = 287/554 (51%), Gaps = 27/554 (4%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTT--YTWSQTYRRCLQLASSLSSFGINPGHV- 66
N L+P F+ RAA + + IY+ T ++Y A L+ + G+
Sbjct: 37 NFHTLSPTFFLPRAAQ-IEPKATAIYHKTANGRILRRSYEEVADRARGLAYYLRKHGYKR 95
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V ++A N PA E + + +G++ IN RL IS I +H++ ++ D
Sbjct: 96 VGILATNTPAFLESIYGIAAAGSVNVAINYRLKHDDISYIFQHADVDMIIAD-------F 148
Query: 127 EVVSLFPPHSKT-PKL-VLITDDKEISSSS-SPPPRIPPADFVDTYENMLAKGDPQFSWV 183
E V L + K P + +L+ +D + + S P + + M KG
Sbjct: 149 EFVGLLDEYRKERPGVPILVDNDTDATEGELSGPFDEAVLEGLKFDVEMGGKGWKDLE-A 207
Query: 184 RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVV---PKQSVLLWTLPMF 240
+ ++ D + L YT GTT+ PKGV ++ ++ A+ ++I+ + ++ LWTLPMF
Sbjct: 208 QAGNEEDIIALAYTSGTTARPKGVEYTHRGAYLAAMGNIIESGLNYHTGRAKYLWTLPMF 267
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H GW F W V T+ CLRK D P ++ L++ G+TH AP V LL ++ EA++L
Sbjct: 268 HAMGWMFPWSVTAVRGTHYCLRKIDYPEIWRLLKDEGITHFNAAPTVNTLLCAAKEAEKL 327
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
+ VR+ A SPP A + + +L H YG TE G P+W +P +E+ +
Sbjct: 328 PQEVRVTVAASPPSAWLFEQMTNLNLHPVHTYGLTETYGPITKGYHMPEWETIPEKEKYA 387
Query: 361 LKARQGVRTIGLTEVDIVDPETG----LSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
ARQG I V ++ E + V RDGQ GEIV G GY KD EAT K
Sbjct: 388 KMARQGHGFIMALPVRVIKTEQADGVLIDVTRDGQEIGEIVFEGNICAKGYYKDAEATRK 447
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
G ++GD+ + HPDG ++I DR+KD+IISGGENISS +E++L +HP + E V
Sbjct: 448 LWAGGVLHSGDLAVWHPDGAIQILDRAKDIIISGGENISSVALEAMLSTHPSILEVGVCA 507
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPKT 534
D W E P AFV+ K G++S T ++IQ+ + + I R+MVP+ V + ELPKT
Sbjct: 508 VADSHWGERPKAFVTTKDGSNS---ETLGAEVIQWAKDNSNISRFMVPREVEVVAELPKT 564
Query: 535 ATGKVQKYVLGDIA 548
+TGK++K VL + A
Sbjct: 565 STGKIKKNVLREWA 578
>gi|435847769|ref|YP_007310019.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Natronococcus
occultus SP4]
gi|433674037|gb|AGB38229.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Natronococcus
occultus SP4]
Length = 547
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 184/543 (33%), Positives = 280/543 (51%), Gaps = 25/543 (4%)
Query: 13 PLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA T + +++ D +T+ + R + A++L GI G V+V+
Sbjct: 4 PLLVTEFLDRARTHYGETEAVVGTDGERFTYDELGERADRFAAALQERGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN + GA+ +N RL + IL+ + ++ D+ + + E+
Sbjct: 64 PNTHYHLAAAYGSMQIGAVHTPLNYRLTPEDFAYILEDAGVDAIYADYEYADRIEEI--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
+ P IT+D + D+ D +E +L P++ RP+ D
Sbjct: 121 ---RDEVPTETFITNDVDAIEGGRSSSDSSDGDWED-FEQVLEDATPEYD--RPEMHEDE 174
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++ I A + + + LWTLPMFH NGW +
Sbjct: 175 IITINYTSGTTGDPKGVCRTHRGETIHAYLVAVHQNLTDDDIYLWTLPMFHVNGWGHIYA 234
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD----RPVRI 306
+GA +VC R DA +F IR+ V+++CGAP VLN+L ++ VRI
Sbjct: 235 VTGMGAKHVCTRGVDAEWLFETIREEDVSYLCGAPTVLNMLIDYYGDNAVETTGANDVRI 294
Query: 307 LTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
TAGS PP L E G+ + H YG TE + + + ++ + R ++K RQ
Sbjct: 295 ATAGSAPPEATLRTVEDEFGWYLKHVYGATETGPLITTSDARRHFDD-GSDGRFAVKKRQ 353
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GR 422
G+ +G TEV +VD E G V RDG+T GE+V+RG +M Y PE T + D G
Sbjct: 354 GLGFMG-TEVRVVD-EDGEDVSRDGETLGEVVVRGNQVMERYWNKPEETEEAFSDRVEGY 411
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
Y+TGD+ + +G + I+DR KD+IISGGENISS E+E L+ HP V++AAV+ P W
Sbjct: 412 YHTGDLATIDENGMIAIQDRKKDIIISGGENISSIELEDTLFDHPEVSDAAVIPSPSEQW 471
Query: 483 QEIPCAFVSLKTGT-DSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
E P AFV ++G D G+ +E ++ + R + Y + + F+ ELP TATGKVQK
Sbjct: 472 GETPKAFVVPESGDPDQPGV--SEDGLVAFTREHLANYKTVQRIEFVAELPTTATGKVQK 529
Query: 542 YVL 544
Y L
Sbjct: 530 YEL 532
>gi|448432519|ref|ZP_21585594.1| AMP-dependent synthetase and ligase [Halorubrum tebenquichense DSM
14210]
gi|445686939|gb|ELZ39238.1| AMP-dependent synthetase and ligase [Halorubrum tebenquichense DSM
14210]
Length = 538
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 185/542 (34%), Positives = 278/542 (51%), Gaps = 32/542 (5%)
Query: 13 PLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ D T YT+++ R + +++L GI G V+V+
Sbjct: 4 PLLTTDFLDRARRHYADEEAVLAVDGTRYTYAELGERADRFSAALQDRGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL S +L + ++ D ++ + V
Sbjct: 64 PNTHYHLEAAYGAMQVGAVHTPLNYRLTPDDFSYMLSDAGVDAIYADAEYAANVEAV--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
+ P +T+D + ++++ L + DP ++ RP+ D D
Sbjct: 121 ---RDEVPTETFLTNDADGVEGD-----------WESFDAALDEADPD-AYERPEMDEDE 165
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++A + A I + V LWTLPMFH NGW +
Sbjct: 166 VITINYTSGTTGDPKGVCRTHRAETLHAYLISIHQEITDDDVYLWTLPMFHVNGWGHIYA 225
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL----SSSPEAKQLDRPVRI 306
+GA +VC R D F IR V++ C AP VLN+L + A D VR+
Sbjct: 226 ITGMGARHVCTRGVDVAETFDRIRGEDVSYFCAAPTVLNMLGDHHAEHGGATTGDADVRV 285
Query: 307 LTAGS-PPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
TAG+ PP A + E G+ + H YG TE + + K ++ A +R ++K Q
Sbjct: 286 ATAGAAPPEATIRTVEEEFGWDLKHVYGATETGPLVTTSDAKRHFDA-DADDRFAVKKTQ 344
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GR 422
G+ +G T+V +VD E G V DG+T GEIV+RG +M Y PEAT + G
Sbjct: 345 GIGYLG-TDVRVVD-EDGEDVAADGETIGEIVVRGNQVMDRYWNKPEATEAAFSERLEGY 402
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
Y+ GD+ ++ DG++ I+DR KD+IISGGENISS E+E L+ H V++AAV+ PD W
Sbjct: 403 YHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDTLFEHDAVSDAAVIPAPDERW 462
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E P AFV ++G TTE+ + + R R+ Y P V F++ LP TATGK+QKY
Sbjct: 463 GETPKAFVVPESGDPEDAGATTEE-LKAFVRDRVADYKTPGEVEFVEALPTTATGKIQKY 521
Query: 543 VL 544
L
Sbjct: 522 EL 523
>gi|327307404|ref|XP_003238393.1| hypothetical protein TERG_00382 [Trichophyton rubrum CBS 118892]
gi|326458649|gb|EGD84102.1| hypothetical protein TERG_00382 [Trichophyton rubrum CBS 118892]
Length = 574
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 186/558 (33%), Positives = 287/558 (51%), Gaps = 25/558 (4%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINPGHV-V 67
N L+P F+ RAA D +I + T +TY++ A L+ + G+ V
Sbjct: 28 NRHTLSPTFFLPRAAAIEPDAEAIYHVTANNKTVRKTYQQFADRARGLAYYIKKRGYRRV 87
Query: 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLE 127
++APN P E F + +GA+ IN RL A I+ I H++ + VD E
Sbjct: 88 GILAPNTPGFLESIFGIAAAGAVNVAINYRLKAEDIAYIFTHADVDSIIVDK-------E 140
Query: 128 VVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKS 187
V L K + + D + + A ++ ++ +G P + + ++
Sbjct: 141 FVHLLDEFRKGSSHIPLIVDTDTHADEGELSGDLDAAILEGLKHDEQQGGPGWDGLEAQA 200
Query: 188 -DLDPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSV---LLWTLPMFHN 242
D + ++ L YT GTT+ PKGV ++ ++ A+ ++I+ + Q LW LPMFH
Sbjct: 201 ADEESLIALAYTSGTTARPKGVEYIHRGCYLAALGNIIESGLNFQQGRCGYLWILPMFHA 260
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
GW+F W V T+ CLRK D P ++ ++++ +TH AP V LL ++ +A++L R
Sbjct: 261 MGWTFPWSITAVRGTHFCLRKIDYPEIWRMLKQENITHFNAAPTVNTLLCAAKQAERLSR 320
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
PVR+ A SPP A + + S+ H YG TE G P W+ +P +E+
Sbjct: 321 PVRVTVAASPPTAHLFEQMTSVNLHPVHVYGLTETYGPITKAYHMPLWDTIPLKEKYKRM 380
Query: 363 ARQGVRTIGLTEVDIVD---PE-TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
ARQG + V ++ PE T + V++DG+ GEIV G GY KD AT K
Sbjct: 381 ARQGHGFLTSLPVRVIKTDVPEGTIIDVRKDGKEIGEIVFTGNICARGYYKDAAATDKLF 440
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
G ++GD+ + H DG ++I DR+KD+IISGGENISS +E++L +HP + E VV
Sbjct: 441 AGGVLHSGDLAVWHSDGAIQILDRAKDIIISGGENISSVALEAMLATHPDILEVGVVAVS 500
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPKTAT 536
D W E P A+V+ +T G T DII + + + I R+MVP+ V + ELPKT+T
Sbjct: 501 DAHWGERPKAYVTTQT-----GRQVTGPDIIAWAKNSSGISRFMVPREVEIVPELPKTST 555
Query: 537 GKVQKYVLGDIANSMSMS 554
GK++K VL + A S +
Sbjct: 556 GKIKKNVLREWAKGASQA 573
>gi|340520671|gb|EGR50907.1| predicted protein [Trichoderma reesei QM6a]
Length = 586
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 189/569 (33%), Positives = 292/569 (51%), Gaps = 46/569 (8%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTT-----YTWSQTYRRCLQLASSLSSFGINPGHVVS 68
L+P F+ERAA+ + +I + + ++ + R LA+ L + V
Sbjct: 28 LSPTFFLERAASIEPNAEAIYHITSNGAILRRSYQEFADRARGLANYLKKHDLKR---VG 84
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
++APN PA E + +P +GA+ N RL I+ I + +E + VD + + +
Sbjct: 85 ILAPNTPAFLEAIYGIPAAGAVIVPANYRLKPDDIAYIFEFAEVDSIIVD----AEFVHL 140
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG------DPQFSW 182
+ F +K PK+ LI D ++S S ++ + +G W
Sbjct: 141 LDAF--KAKHPKVPLIIDSVRLTSISLRDTDATEGQLCGPFDEAVLEGLNYDRSSGNAGW 198
Query: 183 V----RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPK-QSVLLWTL 237
++ D + + +T GTTS PKGVV + ++ + ++I+ + + + LWTL
Sbjct: 199 AGLHSHATNEDDMIAIPFTSGTTSRPKGVVFTNRGAYLACMGNIIESGLNQGRCKYLWTL 258
Query: 238 PMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
PMFH GW+F W V NVCLRK D P ++ L+++ +TH AP V LL +S EA
Sbjct: 259 PMFHAMGWTFPWAVVAVRGLNVCLRKIDYPLIWKLLKELRITHFNAAPTVNTLLVASKEA 318
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTES----------LGFIVSHGYGKTEIAGVNVSCAWK 347
++L R+ A SPP A + + S L + H YG TE G C
Sbjct: 319 EKLPHECRVTVAASPPSAHLFEQMASNLKRATTCTNLNLMPVHVYGMTETYGPLTKCYVL 378
Query: 348 PKWNKLPARERASLKARQGVRTIGLTEVDIVDPETG----LSVKRDGQTRGEIVMRGGSL 403
P+W+ LP E+ + ARQG I + IV P+ + V+++G+ GEIV G
Sbjct: 379 PEWDDLPPHEKFAKMARQGHGFITSLPIRIVKPDQPGGVLVDVEKNGKEIGEIVFFGNIC 438
Query: 404 MLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVL 463
Y KDPEAT K + G ++GD+ + HPDG +I DR+KD+IISGGENISS +ES+L
Sbjct: 439 AKEYYKDPEATRKLFEGGGLHSGDLAVWHPDGSAQILDRAKDIIISGGENISSVALESML 498
Query: 464 YSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRAR--IPRYMV 521
HP + EA VV PD W E P A++++K G G +D+I + + + I ++MV
Sbjct: 499 VEHPDILEAGVVSVPDSHWGERPKAYITVKEGKSLVG-----EDVIDWAKHQSSISKFMV 553
Query: 522 PKTVVFIDELPKTATGKVQKYVLGDIANS 550
P+ V +DELPKT+TGK++K VL + A +
Sbjct: 554 PREVEIVDELPKTSTGKIKKNVLREWAKT 582
>gi|448429182|ref|ZP_21584589.1| AMP-dependent synthetase and ligase [Halorubrum terrestre JCM
10247]
gi|445675269|gb|ELZ27803.1| AMP-dependent synthetase and ligase [Halorubrum terrestre JCM
10247]
Length = 538
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 183/542 (33%), Positives = 279/542 (51%), Gaps = 32/542 (5%)
Query: 13 PLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ D T YT+++ R + +++L + GI G V+V+
Sbjct: 4 PLLTTDFLDRARRHYADEEAVLAVDGTRYTYAELGERADRFSAALQARGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL S +L + ++ D ++ + +
Sbjct: 64 PNTHYHLEAAYGAMQVGAVHTPLNYRLTPDDFSYMLSDAGVDAIYADAEYAANVEAI--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
+ P +T+D + ++++ L DP+ ++ RP+ D D
Sbjct: 121 ---RDEVPTETFLTNDADAVEGD-----------WESFDAALDDADPE-AYERPEMDEDE 165
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++A + A I + V LWTLPMFH NGW +
Sbjct: 166 VITINYTSGTTGDPKGVCRTHRAETLHAYLISIHQEITDDDVYLWTLPMFHVNGWGHIYA 225
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL----SSSPEAKQLDRPVRI 306
GA +VC R D F IR V++ C AP VLN+L + A D VR+
Sbjct: 226 ITGAGARHVCTRGVDVAETFDRIRGEDVSYFCAAPTVLNMLGDHHAEHGGATTGDNDVRV 285
Query: 307 LTAGS-PPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
TAG+ PP A + E G+ + H YG TE + + K +++ A +R ++K Q
Sbjct: 286 ATAGAAPPEATIRTVEEEFGWDLKHVYGATETGPLITTSDAKRHFDE-GADDRFAVKKTQ 344
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GR 422
G+ +G T+V +VD E G V DG+T GEIV+RG +M Y PEAT + + G
Sbjct: 345 GIGYLG-TDVRVVD-ENGEDVAADGETIGEIVVRGNQVMDRYWNKPEATEEAFSERLEGY 402
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
Y+ GD+ ++ DG++ I+DR KD+IISGGENISS E+E L+ H +V++ AV+ PD W
Sbjct: 403 YHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDTLFEHDVVSDVAVIPAPDERW 462
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E P AFV ++G T E+ + + R R+ Y P V F+ ELP TATGK+QKY
Sbjct: 463 GETPKAFVVPESGDPDDAGATPEQ-LKAFVRERVADYKTPGEVEFVAELPTTATGKIQKY 521
Query: 543 VL 544
L
Sbjct: 522 EL 523
>gi|121702597|ref|XP_001269563.1| AMP-binding domain protein, putative [Aspergillus clavatus NRRL 1]
gi|119397706|gb|EAW08137.1| AMP-binding domain protein, putative [Aspergillus clavatus NRRL 1]
Length = 577
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 196/557 (35%), Positives = 287/557 (51%), Gaps = 27/557 (4%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIY---NDTTY--TWSQTYRRCLQLASSLSSFGINPG 64
N L+P F+ RAA D +I + N+ T+ +T R LA L G
Sbjct: 32 NHHTLSPTFFLPRAAAIEPDAEAIYHITANNQVLRRTYIETADRARGLAYYLKKHGFK-- 89
Query: 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V ++ PN PA E + + +GAI +N RL I+ I HS+++++ VD L
Sbjct: 90 -RVGILCPNTPAFLESIYGIAAAGAINIAVNYRLKEDDIAYIFNHSDAEVIIVDQEYVPL 148
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
L + H TP ++ D S P E D S +
Sbjct: 149 LQ---AYRAAHPNTPIIIDTDTDATEGQLSGPFDEAVLQGLKYDIETGSNGWDGLES--Q 203
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQ---SVLLWTLPMFH 241
S+ D + L YT GTT+ PKGV ++ ++ + ++I+ + Q LWTLPMFH
Sbjct: 204 AGSEDDIIALAYTSGTTARPKGVEYTHRGCYLATLGNVIESGLNTQFGRCRYLWTLPMFH 263
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD 301
GW+F W V T+ CLRK + P ++ L+++ +TH AP V LL ++ EA++L
Sbjct: 264 AMGWTFPWAVTAVRGTHYCLRKINYPEIWQLLKQEHITHFNAAPTVNTLLCAADEAERLP 323
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV++ A SPP + + SL H YG TE G + P+W++LPA ++
Sbjct: 324 NPVQVTVAASPPTPHLFEQMTSLNLHPVHVYGMTETYGPITKGYYMPQWDQLPAEQKYKN 383
Query: 362 KARQGVRTIGLTEVDIVD---PE-TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
ARQG + V I+ PE T + V+R+G+ GEIV G GY KDPEAT K
Sbjct: 384 MARQGHGFLTSLPVRIIKTDVPEGTVVDVERNGKEIGEIVFVGNICSPGYYKDPEATRKL 443
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++GD+ + HPDG ++I DR+KD+IISGGENISS +ES+L +HP + EA VV
Sbjct: 444 FAGGVLHSGDLAVWHPDGAIQILDRAKDIIISGGENISSVALESMLVTHPDILEAGVVAV 503
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRAR--IPRYMVPKTVVFIDELPKTA 535
PD W E P A+V++K G G +D+I + + I ++MVP+ V + ELPKT+
Sbjct: 504 PDTHWGERPKAYVTVKHGKQLEG-----QDVIAWAKGHRAISKFMVPREVEVVPELPKTS 558
Query: 536 TGKVQKYVLGDIANSMS 552
TGK++K VL + A S
Sbjct: 559 TGKLRKNVLREWAKGAS 575
>gi|255561363|ref|XP_002521692.1| AMP dependent ligase, putative [Ricinus communis]
gi|223539083|gb|EEF40679.1| AMP dependent ligase, putative [Ricinus communis]
Length = 428
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 169/486 (34%), Positives = 251/486 (51%), Gaps = 87/486 (17%)
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V+ +APN+PA+YELHF+VPM+GA+ +T+NTR
Sbjct: 15 VATLAPNVPALYELHFSVPMAGAVLSTLNTR----------------------------- 45
Query: 127 EVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK 186
P+L+LI D E +SS P Y+++L G F ++P
Sbjct: 46 --------KGNPPQLILINDKCEQETSSMTNNYKSPCHL--DYDSLLTMGKADFEVIKPN 95
Query: 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
++ DP+ +NYT G+T PKGVV ++A ++ ++ + + + V LWT+ MF NGW
Sbjct: 96 NECDPISVNYTSGSTGNPKGVVYSHRAAYLNSLAEIFRCDMRRMPVFLWTVDMFRCNGWC 155
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL-DRPVR 305
TW A +G TNVC+R A + I H S E +Q+ + V
Sbjct: 156 LTWAMAAIGGTNVCIRNVSAKVISDAILLH---------------KPSDEHRQIPSKKVN 200
Query: 306 ILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
++ AG+ + +L + E LGF V+ GYG TE+ G + WK L + E+ +K+ +
Sbjct: 201 VIVAGALLNSQILKKVEELGFNVADGYGMTEVLGPAIVRPWK-----LESDEQEKIKSSE 255
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYT 425
G+ I + VD+ DP T SV DG+T GE++ R LM GY + EAT + G Y+T
Sbjct: 256 GLHNILIEGVDVKDPNTMKSVPHDGKTVGEVMFRSNILMSGYFNNVEATQEAFSGGWYHT 315
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
D+G+ HPDG +++KDR+KD+I++ GE IS+ E+E+ L SHP V EAAVVG+ D E
Sbjct: 316 KDLGIRHPDGSIQMKDRAKDIIVTEGETISTLEVEAALLSHPKVLEAAVVGKSDVVLNE- 374
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLG 545
+ A++P YMVPKT+VF D LP GKVQK+VL
Sbjct: 375 -------------------------FIGAQLPDYMVPKTIVFGD-LPVNFNGKVQKFVLR 408
Query: 546 DIANSM 551
+ AN++
Sbjct: 409 EKANAI 414
>gi|336469667|gb|EGO57829.1| hypothetical protein NEUTE1DRAFT_42686 [Neurospora tetrasperma FGSC
2508]
gi|350290676|gb|EGZ71890.1| acetyl-CoA synthetase-like protein [Neurospora tetrasperma FGSC
2509]
Length = 581
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 175/494 (35%), Positives = 266/494 (53%), Gaps = 22/494 (4%)
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V ++APN PA E + + +G + +N RL I+ I +E + D + LL
Sbjct: 83 VGLLAPNTPAFLESVYGIVAAGGVIVPVNIRLKPEDITYIFDFAEVDSIIADAEYAHLL- 141
Query: 127 EVVSLFPPHSKTPKL--VLITDDKEISSSSSPPPRIPPAD--FVDTYENMLAKGDPQFSW 182
S H P + V+ + I + ++ P D ++ + A G ++
Sbjct: 142 --NSYKKEHPDVPVIIDVVCSFLGTIDTDATEGALCGPFDEAVMEGLNHDKATGSKGWAD 199
Query: 183 VRPKS---DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDW---VVPKQSVLLWT 236
++ ++ + D + + +T GTTS PKG V ++ ++ + ++I+ V +S LWT
Sbjct: 200 LQNQTVANEDDMIAIPFTSGTTSKPKGCVYTHRGAYLATLANVIESGLNVADGRSKYLWT 259
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE 296
LPMFH GW+F W V T+VCLRK D P ++ L+++ GVTH C AP V LL ++ E
Sbjct: 260 LPMFHAMGWTFPWAVCAVRGTHVCLRKIDYPLIWKLLKEEGVTHFCAAPTVNTLLCAAKE 319
Query: 297 AKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
A+ L +PVR+ A SPP + + SL H YG TE G P W+ LP
Sbjct: 320 AEALPKPVRVTVAASPPTPHLFEQMTSLNLFPVHVYGLTETYGPITRGYILPSWDNLPPH 379
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETG----LSVKRDGQTRGEIVMRGGSLMLGYLKDPE 412
++ + ARQG I I+ P+ + V+++GQ GEI+ G GY KDPE
Sbjct: 380 DKYAKMARQGHGFITSLPARIIKPDQPEGVLIDVEKNGQEVGEIIFTGNICCKGYYKDPE 439
Query: 413 ATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEA 472
AT K G +TGD+ + HPDG + I+DR+KD+IISGGENISS +ES+L HP + EA
Sbjct: 440 ATRKLFAGGMLHTGDLAVWHPDGSIHIQDRAKDIIISGGENISSVALESMLAEHPDILEA 499
Query: 473 AVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDE 530
VV PD W E P A+++LK G ++ T +D+I + + + I ++MVP+ V + E
Sbjct: 500 GVVAVPDSHWGERPKAYITLKEGRETS---LTGQDVIDWAKHNSSISKFMVPREVEIVKE 556
Query: 531 LPKTATGKVQKYVL 544
LPKT+TGK++K L
Sbjct: 557 LPKTSTGKIKKNEL 570
>gi|448480530|ref|ZP_21604603.1| AMP-dependent synthetase and ligase [Halorubrum arcis JCM 13916]
gi|445822071|gb|EMA71845.1| AMP-dependent synthetase and ligase [Halorubrum arcis JCM 13916]
Length = 538
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 183/542 (33%), Positives = 279/542 (51%), Gaps = 32/542 (5%)
Query: 13 PLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ D T YT+++ R + +++L + GI G V+V+
Sbjct: 4 PLLTTDFLDRARRHYADEEAVLAVDGTRYTYAELGERADRFSAALQARGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL S +L + ++ D ++ + +
Sbjct: 64 PNTHYHLEAAYGAMQVGAVHTPLNYRLTPDDFSYMLSDAGVDAIYADAEYAANVEAI--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
+ P +T+D + ++++ +L DP ++ RP+ D D
Sbjct: 121 ---RDEVPTETFLTNDADAVEGD-----------WESFDAVLDDADPD-AYERPEMDEDE 165
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++A + A I + V LWTLPMFH NGW +
Sbjct: 166 VITINYTSGTTGDPKGVCRTHRAETLHAYLISIHQEITDDDVYLWTLPMFHVNGWGHIYA 225
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL----SSSPEAKQLDRPVRI 306
GA +VC R D F IR V++ C AP VLN+L + A D VR+
Sbjct: 226 ITGAGARHVCTRGVDVAETFDRIRGEDVSYFCAAPTVLNMLGDHHAEHGGATTGDNDVRV 285
Query: 307 LTAGS-PPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
TAG+ PP A + E G+ + H YG TE + + K +++ A +R ++K Q
Sbjct: 286 ATAGAAPPEATIRTVEEEFGWDLKHVYGATETGPLITTSDAKRHFDE-GADDRFAVKKTQ 344
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GR 422
G+ +G T+V +VD E G V DG+T GEIV+RG +M Y PEAT + + G
Sbjct: 345 GIGYLG-TDVRVVD-ENGEDVAADGETIGEIVVRGNQVMDRYWNKPEATEEAFSERLEGY 402
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
Y+ GD+ ++ DG++ I+DR KD+IISGGENISS E+E L+ H +V++ AV+ PD W
Sbjct: 403 YHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDTLFEHDVVSDVAVIPAPDERW 462
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E P AFV ++G T E+ + + R R+ Y P V F+ ELP TATGK+QKY
Sbjct: 463 GETPKAFVVPESGXPDDAGATPEQ-LKAFVRERVADYKTPGEVEFVAELPTTATGKIQKY 521
Query: 543 VL 544
L
Sbjct: 522 EL 523
>gi|319650037|ref|ZP_08004186.1| AMP-dependent synthetase and ligase [Bacillus sp. 2_A_57_CT2]
gi|317398218|gb|EFV78907.1| AMP-dependent synthetase and ligase [Bacillus sp. 2_A_57_CT2]
Length = 530
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 185/534 (34%), Positives = 275/534 (51%), Gaps = 27/534 (5%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVI 70
+ PL F++RA + +I +D +T+ + R QL+ L + GI G V+ +
Sbjct: 2 NVPLIVTQFLDRAVSLYGSKKAIFADDRVFTYEELNTRVNQLSHGLKASGIEKGDRVAFL 61
Query: 71 APNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVS 130
APN M E + + G I +N RL IL HSESK++FVD L+L V
Sbjct: 62 APNSVEMLEGFYGIFQLGGIIVPLNIRLKPEDYLYILNHSESKILFVDQDLYHLILPVKD 121
Query: 131 LFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLD 190
KT K + + +E + S Y++ L+ D + D
Sbjct: 122 QL----KTVKKIFVHYKEEETEESD-------------YDSWLSSQDSSPYQREVLDEND 164
Query: 191 PMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
L YT GTT PKGV+ ++ ++ A+ ++ V Q VLL LPMFH NGW +
Sbjct: 165 VCSLLYTSGTTGNPKGVMLTHRNNYLHALSTMHHLRVSDQDVLLHVLPMFHVNGWGSPFY 224
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE--AKQLDRPVRILT 308
GA+ VC+RK +F ++KH V+ M AP VLN L E +++ VR++
Sbjct: 225 YTANGASQVCIRKATPERIFDEVQKHKVSVMHMAPTVLNSLMQHYEQFVPAVEQDVRVVI 284
Query: 309 AGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AGS PP + R E LG+ YG TE + ++ + +LP ++ +KA+ G
Sbjct: 285 AGSAPPPAFVTRVEKELGWEFIQVYGMTESSPLSTVSTIRSHLKELPLAQQYRMKAKAGH 344
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGD 427
+ IG EV +++ E G V +G GE+V+R +M GY K+ EAT + ++ G +TGD
Sbjct: 345 QMIG-CEVRVIN-EQGEEVAHNGLEIGEVVVRSNGVMKGYWKNEEATMEAIRGGWLHTGD 402
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+ + G ++I DR KD+IISGGENISS EIE LY HP + EAAV+ P W E P
Sbjct: 403 MANVDEYGNIDIVDRKKDIIISGGENISSIEIEGALYEHPAILEAAVIAVPHEKWGETPH 462
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
AF+ L+ G TE++II + R ++ + V F++ELPKTA+GK+QK
Sbjct: 463 AFIVLRNGK-----TLTEQEIISFTREKLAHFKAVTGVTFVEELPKTASGKIQK 511
>gi|110667656|ref|YP_657467.1| long-chain-fatty-acid--CoA ligase [Haloquadratum walsbyi DSM 16790]
gi|109625403|emb|CAJ51827.1| acyl-CoA synthetase [Haloquadratum walsbyi DSM 16790]
Length = 538
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 185/543 (34%), Positives = 281/543 (51%), Gaps = 34/543 (6%)
Query: 13 PLTPLGFIERAATACDDCPSIIYNDT-TYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA DC +++ D YT+ + R +++L G+ G V+V+
Sbjct: 4 PLLVTDFLDRARRYYGDCEAVVGTDGGRYTYDELGTRADGFSAALRRMGVEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + G I +N RL A IL ++ +V+ DH + + +
Sbjct: 64 PNTHYHLEAAYGTFQIGGIHTPLNYRLIAEDYEYILSDADVSVVYADHEYAEKIDTI--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P IT+D IS S++ +++++A+ + RP D
Sbjct: 121 ---RDDVPTETFITND--ISESNTEGK-------WHEFDDIVAQ---STEYSRPSMSEDE 165
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
+V +NYT GTT PKGV + ++ + A I + V LWTLPMFH NGW +
Sbjct: 166 IVTINYTSGTTGDPKGVCRTHRTETLHAQYVSIHQQISDGDVYLWTLPMFHVNGWGHIYA 225
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK-----QLDRPVR 305
+G +VC R DA +F IR V+++C AP VLN+L +++ D PVR
Sbjct: 226 ITGLGGKHVCTRGIDAEWIFDTIRSENVSYLCAAPTVLNILMDRYDSEGGVKTTGDAPVR 285
Query: 306 ILTAG-SPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
TAG +PP A + E G+ + H YG TE + + + + + R LK +
Sbjct: 286 AATAGAAPPEATIRTVEEEFGWDLLHVYGATETGPLITTSDVDRRLDD--SDNRFGLKKK 343
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK---DG 421
QG+ +G TEV +VD ETG V DG++ GEIV+RG +M Y K PE T DG
Sbjct: 344 QGIGYLG-TEVTVVD-ETGERVPWDGESIGEIVVRGNQVMDRYWKKPEQTETAFSDRIDG 401
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
Y+ GD+ ++ +G++EI+DR KD+IISGGENISS E+E L+SH V++ AV+ P
Sbjct: 402 YYHMGDLAVVDENGFIEIQDRKKDIIISGGENISSIELEDTLFSHDAVSDVAVIPVPSEE 461
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P AFV T + +E ++I++C+ + Y +P+ + F++ELP+TATGK+QK
Sbjct: 462 WGESPKAFVVPVTANPQTSNV-SESELIEHCKGMLAGYKIPREIEFVNELPRTATGKIQK 520
Query: 542 YVL 544
Y L
Sbjct: 521 YEL 523
>gi|448537811|ref|ZP_21622680.1| AMP-dependent synthetase and ligase [Halorubrum hochstenium ATCC
700873]
gi|445701771|gb|ELZ53744.1| AMP-dependent synthetase and ligase [Halorubrum hochstenium ATCC
700873]
Length = 538
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 276/542 (50%), Gaps = 32/542 (5%)
Query: 13 PLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ D T YT+++ R + +++L GI G V+V+
Sbjct: 4 PLLTTDFLDRARRHYADEEAVLAVDGTRYTYAELGERADRFSAALQDRGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL S +L + ++ D ++ + V
Sbjct: 64 PNTHYHLEAAYGAMQVGAVHTPLNYRLTPDDFSYMLSDAGVDAIYADAEYAANVEAV--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
+ P +T+D + ++++ L + DP ++ RP+ D D
Sbjct: 121 ---RDEVPTETFLTNDADAVEGD-----------WESFDAALDEADPD-AYERPEMDEDE 165
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++A + A I + V LWTLPMFH NGW +
Sbjct: 166 VITINYTSGTTGDPKGVCRTHRAETLHAYLISIHQEITDDDVYLWTLPMFHVNGWGHIYA 225
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL----SSSPEAKQLDRPVRI 306
+GA +VC R D F IR V++ C AP VLN+L + A D VR+
Sbjct: 226 ITGMGARHVCTRGVDVAETFDRIRGEDVSYFCAAPTVLNMLGDHHAEHGGATTGDADVRV 285
Query: 307 LTAGS-PPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
TAG+ PP A + E G+ + H YG TE + + K ++ A +R +K Q
Sbjct: 286 ATAGAAPPEATIRTVEEEFGWDLKHVYGATETGPLVTTSDAKRHFDA-DADDRFGVKKTQ 344
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GR 422
G+ +G T+V +VD E G V DG+T GEIV+RG +M Y PEAT + G
Sbjct: 345 GIGYLG-TDVRVVD-EDGEDVAADGETIGEIVVRGNQVMDRYWNKPEATEAAFSERLEGY 402
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
Y+ GD+ ++ DG++ I+DR KD+IISGGENISS E+E L+ H V++ AV+ PD W
Sbjct: 403 YHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDTLFEHDAVSDVAVIPAPDERW 462
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E P AFV ++G TTE+ + + R R+ Y P V F++ LP TATGK+QKY
Sbjct: 463 GETPKAFVVPESGDSDDAGATTEE-LKAFVRERVADYKTPGEVEFVEALPTTATGKIQKY 521
Query: 543 VL 544
L
Sbjct: 522 EL 523
>gi|448318800|ref|ZP_21508312.1| AMP-dependent synthetase and ligase [Natronococcus jeotgali DSM
18795]
gi|445597981|gb|ELY52051.1| AMP-dependent synthetase and ligase [Natronococcus jeotgali DSM
18795]
Length = 542
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 199/551 (36%), Positives = 281/551 (50%), Gaps = 54/551 (9%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
F++RA DD I+ +D T YT+++ R +LA +L G+ G+ V+++APN
Sbjct: 6 FLDRAVDLYDDVTGIVAHDGTEYTYAEVDERVNRLAHALEESGVEQGNRVALLAPNTHYF 65
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E +A GA+F +N RL IL E+ + D+ + + + P +
Sbjct: 66 IETLYATNKLGAVFVPLNYRLTPGEYEYILGDCEANTLIADYEYAEKIEPIRDSIPAET- 124
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SDLDPMVLNY 196
V D EI + YE L +G RP + D +NY
Sbjct: 125 ---FVGYRAD-EIDGEWTD------------YEAFL-EGHSADEPDRPDIGEDDDASINY 167
Query: 197 TWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGA 256
T GTT PKGVV+ ++ A+ + LWTLPMFH NGW T+ G
Sbjct: 168 TSGTTGDPKGVVRTHRTEHWHALVLNQHMEIRDDDNYLWTLPMFHCNGWGHTYAITGTGG 227
Query: 257 TNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLS------SSPEAKQL---------- 300
T+VC R FDA VF +R++ VT MCGAP VLN L+ ++PE ++
Sbjct: 228 THVCQRTFDAEGVFDRVREYDVTFMCGAPTVLNSLTQYHDDRAAPEGQRGEGGETAGAFE 287
Query: 301 ---DRPVRILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
DR VRI TAGS P + E + + H YG TE A + ++ + P+ +L R
Sbjct: 288 TTGDRDVRIATAGSAPATATIETVEDEFDWRIIHIYGLTETAPI-ITTSNSPR--RLAQR 344
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
R LK +QG T+ T+V IVD E G V RDG+T GEIV+RG +M YL PE T +
Sbjct: 345 GR-ELKVKQGAETL-CTDVRIVD-EDGEDVPRDGRTIGEIVVRGNQVMDRYLNKPEETER 401
Query: 417 CMKD---GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
+ G ++TGD+ + DG + I+DR KD+IISGGENISS E+E VLY HP V +AA
Sbjct: 402 AFNERLEGYFHTGDLATIDEDGMVAIQDRKKDIIISGGENISSIELEDVLYDHPDVQKAA 461
Query: 474 VVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPK 533
V+ P W E P A + + TE +I+++ R+ Y P +V F+++LP+
Sbjct: 462 VIPVPSEQWGETPKALI-----VPAADAEPTEDEIVEFVTDRLAGYKKPTSVEFVEDLPE 516
Query: 534 TATGKVQKYVL 544
TATGKVQKY L
Sbjct: 517 TATGKVQKYEL 527
>gi|336271641|ref|XP_003350579.1| hypothetical protein SMAC_02292 [Sordaria macrospora k-hell]
gi|380090244|emb|CCC12071.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 574
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 173/490 (35%), Positives = 263/490 (53%), Gaps = 22/490 (4%)
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V ++APN PA E + + +G + +N RL I+ I + +E + D + LL
Sbjct: 83 VGLLAPNTPAFLESVYGIVAAGGVIVPVNIRLKPEDITYIFEFAEVDSIIADAEYAHLL- 141
Query: 127 EVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK 186
S H P ++ + D + P ++ ++ A G ++ ++ +
Sbjct: 142 --DSYKKAHPDVPIIIDVDTDATEGALCGPFDEA----VMEGLQHDKATGSKGWADLQNQ 195
Query: 187 S---DLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDW---VVPKQSVLLWTLPMF 240
+ + D + + +T GTTS PKG V ++ ++ + ++I+ V +S LWTLPMF
Sbjct: 196 TVANEDDMIAIPFTSGTTSKPKGCVYTHRGAYLATLANVIEAGLNVADGRSKYLWTLPMF 255
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H GW+F W V T+VCLRK D P ++ L+++ GVTH C AP V LL ++ EA+ L
Sbjct: 256 HAVGWTFPWAVCAVRGTHVCLRKIDYPLIWKLLKEEGVTHFCAAPTVNTLLCAAKEAEVL 315
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
+PVR+ A SPP + + SL H YG TE G P W+ LP E+ +
Sbjct: 316 PKPVRVTVAASPPTPHLFEQMTSLNLFPVHVYGLTETYGPITRGYILPSWDNLPPHEKYA 375
Query: 361 LKARQGVRTIGLTEVDIVDPETG----LSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
ARQG I V I+ P+ + V+++G+ GEI G GY KDPEAT K
Sbjct: 376 KMARQGHGFITSLPVRIIKPDQPEGVLIDVEKNGKEVGEICFMGNICCKGYYKDPEATRK 435
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
G +TGD+ + PDG + I+DR+KD+IISGGENISS +ES+L HP + EA VV
Sbjct: 436 LFAGGALHTGDLAVWAPDGSIHIQDRAKDIIISGGENISSVALESMLAEHPDILEAGVVA 495
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPKT 534
PD W E P A+++LK G ++ T +D+I + + + I ++MVP+ V + ELPKT
Sbjct: 496 VPDSHWGERPKAYITLKEGRETS---LTGQDVIDWAKHNSSISKFMVPREVEIVKELPKT 552
Query: 535 ATGKVQKYVL 544
+TGK++K L
Sbjct: 553 STGKIKKNEL 562
>gi|448593682|ref|ZP_21652637.1| medium-chain acyl-CoA ligase [Haloferax elongans ATCC BAA-1513]
gi|445729463|gb|ELZ81059.1| medium-chain acyl-CoA ligase [Haloferax elongans ATCC BAA-1513]
Length = 545
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 185/536 (34%), Positives = 285/536 (53%), Gaps = 25/536 (4%)
Query: 19 FIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
F++RA T + +++ T+ + R +L+++L + G+ G V+VI PN
Sbjct: 10 FLDRARTYYGEMDAVVTTTGDRLTYDELGARVDRLSAALQAHGVEQGDRVAVIDPNTHYH 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E +A GAI +N RL + ++ +K + VD+ + + + +
Sbjct: 70 LETAYASLQIGAIHTPLNYRLTPSELDYVVNDCGAKAIIVDYEYAEKIEAI------RDE 123
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMV-LNY 196
P V IT+D++ + P + ++ D ++ +A+ DP ++ RP+ + D + +NY
Sbjct: 124 IPTEVFITNDRD---ALEDEPTVDAENWED-FDAAIAETDPD-AYDRPEMEEDDVAAINY 178
Query: 197 TWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGA 256
T GTT PKGVV ++A I S + + V LWTLPMFH NGW + +GA
Sbjct: 179 TSGTTGNPKGVVMTHRAEVIHTYLSAAHQEISDEDVYLWTLPMFHANGWGHIFSITGMGA 238
Query: 257 TNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL---SSSPEAKQL-DRPVRILTAGSP 312
T+VC R D +F I + V++MC AP V+N+L E + L D P+RI + G+
Sbjct: 239 THVCTRGIDTADIFETIVEEDVSYMCAAPTVMNMLIDHYRDHEPQTLGDNPLRIASGGAA 298
Query: 313 PPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIG 371
PP + E G+ YG TE + VS ++ +++ + R ++K + G+ +G
Sbjct: 299 PPEATMRTLEDDFGWHFKQMYGLTETGPLIVSSDFRRFYDE-DSDSRFAVKKKTGIGFMG 357
Query: 372 LTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYYTGDV 428
TE+ +VD E G V DGQT GE+V+RG ++ Y PE T K D G ++TGD+
Sbjct: 358 -TEITVVD-EDGEEVPHDGQTVGEVVVRGNQILEAYWNKPEETEKAFNDRIEGWFHTGDL 415
Query: 429 GMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCA 488
+ G+L I+DR KD+IISGGENISS E+E VL+ HP V+E A+V P W E P A
Sbjct: 416 ATVDEKGFLTIQDRKKDIIISGGENISSLELEDVLHDHPAVSEVAIVPTPSDKWGESPKA 475
Query: 489 FVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
+V L T DS T+ ++ + R + Y V K V F++ LP TATGKVQKY L
Sbjct: 476 YV-LPTSGDSQNPGVTKDELESFMRESLAGYKVVKEVEFVENLPTTATGKVQKYEL 530
>gi|76802349|ref|YP_327357.1| long-chain-fatty-acid--CoA ligase [Natronomonas pharaonis DSM 2160]
gi|76558214|emb|CAI49802.1| acyl-CoA synthetase [Natronomonas pharaonis DSM 2160]
Length = 537
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 281/542 (51%), Gaps = 33/542 (6%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F+ERA D +++ +T+++ R +++ +L GI G V+V+
Sbjct: 4 PLLVTQFLERARRNYGDQEAVVATTGERFTYNELADRADRVSKALQERGIEKGDAVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GAI +N RL + IL ++K V D+ + + V
Sbjct: 64 PNTHYHLEAAYGSMQLGAIHAPLNYRLLPDDLEYILNDCDAKAVIADYELAEKIEAV--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P + IT+D + + ++ ++ P + P+ D D
Sbjct: 121 ---RDDIPTDIFITNDATETDGE-----------WEDFDEVIDGVGPDYD--EPEMDEDD 164
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV++ +++ + A + I + V LWTLPMFH NGW +
Sbjct: 165 VITINYTSGTTGDPKGVMRTHRSETLHAYLTSIHQEISDDDVYLWTLPMFHVNGWGHIYS 224
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL----DRPVRI 306
+GA +VC R DA T+F I+ V+++C AP VLN+L ++ + D VR+
Sbjct: 225 ITGMGAKHVCTRGVDAETIFEAIQSEDVSYLCAAPTVLNMLLDYYDSHDVETTGDSDVRV 284
Query: 307 LTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
TAGS PP + E G+ + H YG TE G ++ + ++ + +R ++K Q
Sbjct: 285 ATAGSAPPEATIRTVEDEFGWYLKHVYGATE-TGPLITTSDSRRFFDDDSEDRFAVKKTQ 343
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GR 422
G+ +G T+V +VD E G V RDGQT GEIV+RG +M YL PEAT + D G
Sbjct: 344 GLGFLG-TDVRVVD-EDGNDVPRDGQTIGEIVVRGNQVMDRYLGKPEATEEAFNDRVEGY 401
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
Y+ GD+ + +G + I+DR KD+IISGGENISS E+E L+ HP V++ AV+ P W
Sbjct: 402 YHMGDLATVDENGMMRIQDRKKDIIISGGENISSIELEDTLFEHPEVSDVAVIPAPSDEW 461
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E P AFV ++G D TE ++ + R + Y + + V F++ELP TATGKVQKY
Sbjct: 462 GETPKAFVVPESG-DPDDPAVTEDELTAFTRENLASYKMVRRVEFVEELPTTATGKVQKY 520
Query: 543 VL 544
L
Sbjct: 521 EL 522
>gi|300711682|ref|YP_003737496.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
gi|448296210|ref|ZP_21486270.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
gi|299125365|gb|ADJ15704.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
gi|445582182|gb|ELY36526.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
Length = 537
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 188/543 (34%), Positives = 279/543 (51%), Gaps = 35/543 (6%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ +T+ + R +L+++L+ GI G V+V+
Sbjct: 4 PLLTTDFLDRARRHYGDQEAVVATTGERFTYGELGDRVDRLSAALAERGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E +A+ GAI +N RL IL + K V DH + +
Sbjct: 64 PNTHYHLEAAYAIMQLGAIHTPLNYRLVPEDFEYILNDAGVKAVIADHEHAG------KI 117
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P P + I++D + D+VD ++ +L+ D + RP+ D
Sbjct: 118 EPIRGSVPTDLYISNDANATD----------GDWVD-FDALLS--DSTGEYDRPEMTEDE 164
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++ + A + + V LWTLPMFH NGW +
Sbjct: 165 VITINYTSGTTGDPKGVCRTHRTETLHAYLVSLHQEIRDDDVYLWTLPMFHVNGWGHIYA 224
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL----SSSPEAKQLDRPVRI 306
+GA +VC R DA + IR V+++C AP VLN+L + E Q PVR
Sbjct: 225 ITGMGAKHVCTRGIDAEWILETIRTEDVSYLCAAPTVLNMLIERYEETGEGTQGSNPVRA 284
Query: 307 LTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
TAG+ PP + E G+ + H YG TE G ++ + + + +R ++K RQ
Sbjct: 285 ATAGAAPPEATIRTVEDEFGWYLKHVYGATE-TGPLITTSDARRLFDPDSTDRFAIKKRQ 343
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GR 422
G+ +G TE+ +VD E G V RD T GEIV+RG +M GY + P+AT + D G
Sbjct: 344 GLGYLG-TEIRVVDDE-GEDVPRDDATIGEIVVRGNQVMEGYWEKPDATEEAFSDRIEGY 401
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
Y+TGD+ ++ G + I+DR KD+IISGGENISS E+E L+ HP V +AAV+ P W
Sbjct: 402 YHTGDLAVVDEHGMISIQDRKKDIIISGGENISSIELEDTLFEHPAVADAAVIPAPSKKW 461
Query: 483 QEIPCAFVSLKTGT-DSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
E P AF+ G DS G E I ++ R R+ Y V + F++ELP TATGK+QK
Sbjct: 462 GETPKAFLVPANGDPDSPGASAEE--ITEFTRERLAGYKVVHEIEFVEELPTTATGKIQK 519
Query: 542 YVL 544
+ L
Sbjct: 520 FEL 522
>gi|322701633|gb|EFY93382.1| AMP-binding domain protein [Metarhizium acridum CQMa 102]
Length = 567
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 189/546 (34%), Positives = 285/546 (52%), Gaps = 37/546 (6%)
Query: 14 LTPLGFIERAATACDDCPSIIY---NDTTYTWS-QTYR-RCLQLASSLSSFGINPGHVVS 68
L+P F+ERAA + +I + N S QT+ R LA L ++ +
Sbjct: 28 LSPTFFLERAALVEPNADAIFHITPNGVALRRSYQTFADRARGLAYYLKKHKLS---RIG 84
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
++APN PA E + + G + N RL A I+ I +H+E + VD LL
Sbjct: 85 ILAPNTPAFLESIYGIVAGGGVVVPANYRLKADDIAYIFEHAEVDAIIVDKEFEGLLGAF 144
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP--QFSWV--- 183
K P + LI D + + ++ P F + LA + +W
Sbjct: 145 TK------KHPNVPLIVD---LDTDATEGPSC--GQFNEAILEGLAYDEELGGHAWAGLQ 193
Query: 184 -RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPK-QSVLLWTLPMFH 241
+ ++ D + + +T GTTS PKGVV ++ ++ A+ ++I+ + + + LWTLPMFH
Sbjct: 194 SKATNEDDMLAIPFTSGTTSRPKGVVYTHRGAYLAAMGNIIESGLNQGRCRYLWTLPMFH 253
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD 301
GW+F W V NVCLRK D P ++ L+++ G+TH AP V LL ++ EA +L
Sbjct: 254 AMGWTFPWSVVAVRGLNVCLRKIDYPLIWKLLKEEGITHFNAAPTVNTLLVAAKEAVKLP 313
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV++ A SPP A + +L + H YG TE G C P+W+ LP +++ +
Sbjct: 314 NPVQVTVAASPPSAHLFELMTNLNLMPVHVYGMTETYGPITKCYHLPEWDNLPPQQKYAK 373
Query: 362 KARQGVRTIGLTEVDIVDPETG----LSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
ARQG + + I+ P+ + V ++GQ GEIV G Y KD EA+ K
Sbjct: 374 MARQGHGFVTSLPIRIIKPDQPEGVLIDVAKNGQEIGEIVFIGNICAKEYFKDAEASRKL 433
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++GD+ + HPDG +I DR+KD+IISGGENISS +ESVL HP + EA VV
Sbjct: 434 FAGGVLHSGDLAVWHPDGSAQILDRAKDIIISGGENISSVALESVLVQHPDILEAGVVAI 493
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPKTA 535
P+ W E+P A+V++K G G +D+I + + + I R+MVPK V + ELPKT+
Sbjct: 494 PNDHWGEVPKAYVTVKEGKTIRG-----EDVISWAKHQSNISRFMVPKEVEVVKELPKTS 548
Query: 536 TGKVQK 541
TGK++K
Sbjct: 549 TGKIKK 554
>gi|322707233|gb|EFY98812.1| AMP-binding domain protein [Metarhizium anisopliae ARSEF 23]
Length = 567
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 187/546 (34%), Positives = 286/546 (52%), Gaps = 37/546 (6%)
Query: 14 LTPLGFIERAATACDDCPSIIY---NDTTYTWS-QTYR-RCLQLASSLSSFGINPGHVVS 68
L+P F+ERAA + +I + N S QT+ R LA L ++ +
Sbjct: 28 LSPTFFLERAALVEPNADAIFHITPNGVALRRSYQTFADRARGLAYYLKKHKLSR---IG 84
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
++APN PA E + + G + N RL I+ I +H++ + VD LL
Sbjct: 85 ILAPNTPAFLESIYGIVAGGGVMVPANYRLKEDDIAYIFEHADVDCIIVDKEFEGLL--- 141
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLA--KGDPQFSWV--- 183
+F K P + LI D + + ++ P F + LA + SW
Sbjct: 142 -GVFT--KKHPNVPLIVD---LDTDATEGPSC--GQFNEAILEGLAYDRELGGHSWAGLQ 193
Query: 184 -RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPK-QSVLLWTLPMFH 241
+ ++ D + + +T GTTS PKGVV ++ ++ A+ ++I+ + + LWTLPMFH
Sbjct: 194 SKATNEDDMLAIPFTSGTTSRPKGVVYTHRGAYLAAMGNIIESGLNQGHCRYLWTLPMFH 253
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD 301
GW+F W V NVCLRK D P ++ L+++ G+TH AP V LL ++ EA +L
Sbjct: 254 AIGWTFPWSVVAVRGLNVCLRKIDYPLIWKLLKEEGITHFNAAPTVNTLLVAAKEAVKLP 313
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PV++ A SPP A + +L + H YG TE G C P+W+ LP +++ +
Sbjct: 314 NPVQVTVAASPPSAHLFELMTNLNLMPVHVYGMTETYGPITKCYHLPEWDNLPPQQKYAK 373
Query: 362 KARQGVRTIGLTEVDIVDPETG----LSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
ARQG + + I+ P+ + V ++GQ GEIV G Y KD EA+ K
Sbjct: 374 MARQGHGFVTSLPIRIIKPDQPEGVLIDVAKNGQEIGEIVFIGNICAKEYYKDAEASRKL 433
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++GD+ + HPDG +I DR+KD+IISGGENISS +ES+L HP + EA VV
Sbjct: 434 FAGGVLHSGDLAVWHPDGSAQILDRAKDIIISGGENISSVALESMLVQHPDILEAGVVAV 493
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPKTA 535
P+ W E+P A+V++K G + G +D+I + + + I ++MVPK V + ELPKT+
Sbjct: 494 PNDHWGEVPKAYVTVKEGKNIRG-----EDVISWAKHQSNISKFMVPKEVEVVKELPKTS 548
Query: 536 TGKVQK 541
TGK++K
Sbjct: 549 TGKIKK 554
>gi|409083399|gb|EKM83756.1| hypothetical protein AGABI1DRAFT_31483 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 518
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 201/563 (35%), Positives = 269/563 (47%), Gaps = 89/563 (15%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTY-------TWSQTYRRCLQLASSLSSFGIN 62
+S PL PL F+ RAA D ++++ + Y TW+Q R LA +L GI
Sbjct: 24 SSHPLNPLDFLLRAAQVYPDKVALVHPNVQYPVQYTFATWAQ---RIQNLAYALLYTGIK 80
Query: 63 PGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
PG V+VIAPN P + + H V + AI INTRL ++ IL HS + L+ VD
Sbjct: 81 PGDRVAVIAPNSPLIADAHHGVIAARAILTPINTRLKPSEVAYILDHSGASLILVD---- 136
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
E V L P P V+I+ D D YE L+KG QFS
Sbjct: 137 ---FEFVHLLPKDINIP--VVISKDT--------------GRHDDPYEEFLSKGR-QFSQ 176
Query: 183 VRPKSDLDPMVLNYTWGTTSAP----KGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
R +WG A V CY + + SV LW LP
Sbjct: 177 ER------------SWGGLDAEPDENAAAVLCY--------------TMTRDSVYLWILP 210
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK 298
MFH GW+F W + A + LR + ++ I + GV+H CGAP V + + P+A+
Sbjct: 211 MFHAAGWTFPWASVFSFAKQITLRTVNYTHIWQHIIESGVSHYCGAPTVQIGIVNDPQAR 270
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
+L +PVR + AG+ P A ++ E LGF H YG T + LP ER
Sbjct: 271 KLPQPVRAVIAGAAPTAHLIEELEKLGFAPVHVYGLT---------------SSLPLAER 315
Query: 359 ASLKARQGVRTIGLTEVDIV----DPETG---LSVKRDGQTRGEIVMRGGSLMLGYLKDP 411
A ARQG V +V D E V RDG+T GEIV +G +M Y +DP
Sbjct: 316 ARFMARQGHAFATAQGVRVVFAVPDEEKNPVLRDVPRDGKTMGEIVTKGNIVMKEYFRDP 375
Query: 412 EATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNE 471
EAT K + G + TGD+ +M+PDG + I DRSKD+IISGGEN SS IE L SHP V E
Sbjct: 376 EATRKAFRGGYFKTGDLAVMNPDGSIAILDRSKDIIISGGENASSLAIEQELTSHPHVLE 435
Query: 472 AAVVGRPDPFWQEIPCAFVSL---KTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFI 528
+VV R P W E P AFV L +G D+ + +AR+P + P+ + +
Sbjct: 436 VSVVARLHPKWGERPMAFVLLHPQHAAKWAGRHHEFGNDLKNHAKARLPGFACPEWIEVV 495
Query: 529 DELPKTATGKVQKYVLGDIANSM 551
+LPKT+TGK+ K L I +
Sbjct: 496 PDLPKTSTGKILKSELRKIVAKL 518
>gi|345565058|gb|EGX48014.1| hypothetical protein AOL_s00081g341 [Arthrobotrys oligospora ATCC
24927]
Length = 581
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 184/555 (33%), Positives = 288/555 (51%), Gaps = 31/555 (5%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSF-GINPGHVVS 68
S L+P F+ RAA D ++++ T +TY+ A L+ + + V
Sbjct: 32 SHTLSPTYFLPRAAAIEPDATAVVHITANNKTLRRTYQELADRARGLAYYLKAHNFKRVG 91
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
++APN PA E +F + +G + IN RL IS I H++ + + VD E
Sbjct: 92 ILAPNTPAFLEAYFGIAAAGGVSVAINYRLKKDDISYIFDHADVEAIIVD-------TEY 144
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKS- 187
+ L + ++ +I +D + + ++ + + G + + ++
Sbjct: 145 LGLLDTYRESHPNTVIIEDTDTDAVEGELCGPFDGAVLEGLKIDIHSGSKGWDGLEAQAQ 204
Query: 188 DLDPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVP---KQSVLLWTLPMFHNN 243
D D + L YT GTT+ PKGV ++ ++ A+ ++I+ + + LWTLP+FH
Sbjct: 205 DEDALFSLAYTSGTTARPKGVGYTHRGVYLAALGNVIESGLNYHRGRCKYLWTLPLFHAT 264
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP 303
GW+F W +V T+ CLRK D ++ +++ G+TH AP V LL + A +L+ P
Sbjct: 265 GWTFPWSVTMVRGTHYCLRKIDYGLIWKFMKEEGITHFAAAPTVNTLLCNDKAAVKLENP 324
Query: 304 VRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
VR+ A SPP A + + SL H YG TE G + P W+ LP ER + A
Sbjct: 325 VRVTVAASPPTAHLFQQMTSLNLHPVHVYGMTETYGPISKGYYMPSWDDLPDSERFAKMA 384
Query: 364 RQG--------VRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
RQG +R I E V T + VK+DG+ GE+V G GY K+PE T
Sbjct: 385 RQGHGFITSLPLRVIRTGEN--VLEGTVIDVKKDGKEIGEVVFVGNICAKGYYKNPEETK 442
Query: 416 KCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVV 475
K G ++GD+ + H DG ++I DR+KD+IISGGENISS +ES+L +HP + EA+VV
Sbjct: 443 KLFAGGVLHSGDLAVWHEDGAIQIMDRAKDIIISGGENISSVALESMLANHPDILEASVV 502
Query: 476 GRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPK 533
D W E P AFV+++ G T ++II++ + + I ++MVP+ V ++ELPK
Sbjct: 503 AVSDSHWGERPKAFVTIQPGKS-----ITGEEIIEWAKHVSDISKFMVPREVEIVNELPK 557
Query: 534 TATGKVQKYVLGDIA 548
T+TGKV+K VL + A
Sbjct: 558 TSTGKVKKTVLREWA 572
>gi|385803098|ref|YP_005839498.1| acyl-CoA synthetase [Haloquadratum walsbyi C23]
gi|339728590|emb|CCC39745.1| acyl-CoA synthetase [Haloquadratum walsbyi C23]
Length = 538
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 183/543 (33%), Positives = 281/543 (51%), Gaps = 34/543 (6%)
Query: 13 PLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA DC +++ D + YT+ + R +++L G+ G V+V+
Sbjct: 4 PLLVTDFLDRARRYYGDCEAVVGTDGSRYTYDELGTRADGFSAALRRMGVEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + G I +N RL A IL ++ +V+ DH + + +
Sbjct: 64 PNTHYHLEAAYGTFQIGGIHTPLNYRLIAEDYEYILSDADVSVVYADHEYAEKIDTI--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P IT+D IS +++ +++++A+ + RP D
Sbjct: 121 ---RDDVPTETFITND--ISETNTEGK-------WHEFDDIIAQ---STEYSRPSMSEDE 165
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
+V +NYT GTT PKGV + ++ + A I + V LWTLPMFH NGW +
Sbjct: 166 VVTINYTSGTTGDPKGVCRTHRTETLHAQYVSIHQQISDGDVYLWTLPMFHVNGWGHIYA 225
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK-----QLDRPVR 305
+G +VC R DA +F IR V+++C AP VLN+L +++ D VR
Sbjct: 226 ITGLGGKHVCTRGIDAEWIFDTIRSEDVSYLCAAPTVLNMLMDRYDSEGGVKTTGDASVR 285
Query: 306 ILTAG-SPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
TAG +PP A + E G+ + H YG TE + + + + + R LK +
Sbjct: 286 AATAGAAPPEATIRTVEEEFGWDLLHVYGATETGPLITTSDVDRRLDD--SDNRFGLKKK 343
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK---DG 421
QG+ +G TEV +VD ETG V DG++ GEIV+RG +M Y K PE T DG
Sbjct: 344 QGIGYLG-TEVTVVD-ETGERVPWDGESIGEIVVRGNQVMDRYWKKPEQTETAFSDRIDG 401
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
Y+ GD+ ++ +G++EI+DR KD+IISGGENISS E+E L+SH V++ AV+ P
Sbjct: 402 YYHMGDLAVVDENGFIEIQDRKKDIIISGGENISSIELEDTLFSHEAVSDVAVIPVPSEE 461
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P AFV T + +E ++I++C+ + Y +P+ + F++ELP+TATGK+QK
Sbjct: 462 WGESPKAFVVPVTANPQTSNV-SESELIEHCKGMLAGYKIPREIEFVNELPRTATGKIQK 520
Query: 542 YVL 544
Y L
Sbjct: 521 YEL 523
>gi|407795272|ref|ZP_11142231.1| acyl-CoA synthetase [Salimicrobium sp. MJ3]
gi|407020157|gb|EKE32870.1| acyl-CoA synthetase [Salimicrobium sp. MJ3]
Length = 521
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 189/540 (35%), Positives = 283/540 (52%), Gaps = 40/540 (7%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
F++RA T +II D +T+++ Y+R QL+ LSS G+ G V+ +APN M
Sbjct: 8 FLDRAVTVYGTKEAIIDQDGYAHTYNEVYKRVQQLSHGLSSLGVEKGDRVAYLAPNTLEM 67
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
YE + V +G I ++NTRL IL HS SK++FVD+ E+V L P +
Sbjct: 68 YEGFYGVFQTGGIMVSLNTRLKPEDYRFILDHSGSKVLFVDY-------ELVPLIEPIVE 120
Query: 138 TPKLV--LITDDKEISSSSSPPPRIPPADFVDTYENMLAKG-DPQFSWVRPKSDL---DP 191
V +I +E + P YEN LA D F P++D+ D
Sbjct: 121 QLDTVEHIIVHGEEEDKNGMP-----------GYENWLASFPDSDF----PRADVKENDT 165
Query: 192 MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGA 251
L YT GTT PKGV+ ++ ++ A+ V Q L+ LPMFH NGW +
Sbjct: 166 ATLLYTSGTTGNPKGVMLTHRNNYLHALSIQHHLRVSDQDKLIHILPMFHVNGWGSPFYY 225
Query: 252 AVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP--VRILTA 309
GAT + +K + KH T M AP VLN L S + + P +R++ A
Sbjct: 226 TANGATQIMQKKVIPEEILEKAHKHNATVMHMAPTVLNGLISKYHETKPETPDNMRLVIA 285
Query: 310 GSPPPAPVLLR-TESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVR 368
GS PP + E +G+ YG TE + ++ + ++ + + + KA+ G+
Sbjct: 286 GSAPPKAFVKEIEEEIGWEFYQVYGMTESSPLS-TASYISTEEEYEGDDYYAAKAKAGLE 344
Query: 369 TIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDV 428
IG T+V +VD E G V +DG+ GE++++G +M GY K+ E T++ +++G YTGD+
Sbjct: 345 VIG-TKVRVVDEE-GEEVAKDGKEVGEVIVKGPGVMKGYWKNEEETNRTLRNGWLYTGDM 402
Query: 429 GMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCA 488
G + G + I DR KD+IISGGENISS E+ESV Y H + EAAV+ P W E P A
Sbjct: 403 GTVDGYGRIAITDRKKDIIISGGENISSIEVESVFYDHDEIQEAAVIALPHEKWGETPHA 462
Query: 489 FVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVLGDIA 548
+ K G++ +E +II + R ++ + P V F++ELPKTA+GK+QK L ++A
Sbjct: 463 IIVRKEGSE-----LSEDEIISFSREKLAHFKCPTAVTFLEELPKTASGKIQKVKLRNLA 517
>gi|261197577|ref|XP_002625191.1| AMP-binding domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239595821|gb|EEQ78402.1| AMP-binding domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 600
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 197/580 (33%), Positives = 291/580 (50%), Gaps = 56/580 (9%)
Query: 3 RLKPNPANSCPLTPLGFIERAATACDDCPSIIYNDTT------YTWSQTYRRCLQLASSL 56
R +P N L+P F+ RAA A + IY+ T ++ +T R A L
Sbjct: 27 RETSHPFNRHTLSPTFFLPRAA-AIEPNAQAIYHVTANNKVLRRSYIETADRARGFAYYL 85
Query: 57 SSFGINPGHVVSVIAPNIPAMYELHFAV--------------PMSGAIFN-----TINTR 97
G V ++ PN PA E FA+ P SGA+ +N R
Sbjct: 86 RKHGFKR---VGILCPNTPAFLESIFAIGAAGGVNVGMITLLPFSGAVDAKTEALAVNYR 142
Query: 98 LDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPP 157
L I+ I HSE+ ++ VD LL E F + L++ TD I S P
Sbjct: 143 LKPEDIAYIFNHSEADVIIVDKEFVPLLDE----FKKTNGHVPLIIDTDTDAIEGELSGP 198
Query: 158 --PRIPPADFVDTYENMLAKGDPQFSWVRPKS-DLDPMV-LNYTWGTTSAPKGVVQCYKA 213
+ DT G+ + + ++ D D ++ L YT GTTS PKGV +++
Sbjct: 199 FDQAVLEGLSFDT-----TSGNHGWQGLEAQTPDEDALIALAYTSGTTSRPKGVEYIHRS 253
Query: 214 FFIIAVDSLIDWVVPK---QSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVF 270
++ + ++I+ + + LWTLPMFH GW+F W V T+ CLRK + P ++
Sbjct: 254 CYLATLANIIESGLNSSQGRCRYLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKINYPLIW 313
Query: 271 ALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSH 330
L+++ +TH C AP V +L SS EA+ L PVR+ A SPP + + +L H
Sbjct: 314 KLLKEEDITHYCAAPTVNTILCSSKEAEVLPNPVRVTVAASPPTPHLFEQMTNLNLHPVH 373
Query: 331 GYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVDPE----TGLSV 386
YG TE G + P+W+ +P E+ ARQG + V ++ E T + V
Sbjct: 374 VYGLTETYGPITKGYYLPQWDNIPTEEKYKKMARQGHGFLTSLPVRVIKTEVPEGTVIDV 433
Query: 387 KRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDV 446
+++G+ GEIV G GY K+ E T K G ++GD+ + HPDG ++I DR+KD+
Sbjct: 434 EKNGEEMGEIVFVGNICARGYYKNEEETKKLFSGGVLHSGDLAVWHPDGAIQILDRAKDI 493
Query: 447 IISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEK 506
IISGGENISS +ES+L +HP + EA VV PD W E P AF+++ G G K
Sbjct: 494 IISGGENISSVALESMLATHPDILEAGVVAVPDSHWGERPKAFITVHAGKQLEG-----K 548
Query: 507 DIIQYCR--ARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
D+I++ + + I R+MVP+ V + ELPKT+TGK++K VL
Sbjct: 549 DVIEWAKHVSGISRFMVPREVEVVRELPKTSTGKLKKNVL 588
>gi|448299782|ref|ZP_21489789.1| AMP-dependent synthetase and ligase [Natronorubrum tibetense GA33]
gi|445586936|gb|ELY41204.1| AMP-dependent synthetase and ligase [Natronorubrum tibetense GA33]
Length = 537
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 181/543 (33%), Positives = 277/543 (51%), Gaps = 35/543 (6%)
Query: 13 PLTPLGFIERAATAC-DDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA T DD + +T+ + R + +++L GI G V+V+
Sbjct: 4 PLLTTDFLDRARTHYGDDEAVVATTGERFTYGELGERADRFSAALQERGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + +GAI +N RL S +L+ +E V+ D+ + +
Sbjct: 64 PNTHYHLEAAYGTMQTGAIHMPLNYRLTPDDFSYMLEDAEVDAVYADYDFAD------KI 117
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P + P IT+D E + ++++L ++ RP+ D
Sbjct: 118 EPIREEVPAETFITNDAESVDGE-----------WEEFDDVLEAAGTEYD--RPEMHEDE 164
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++A + A I + LWTLPMFH NGW +
Sbjct: 165 IITINYTSGTTGDPKGVCRTHRAETLHAYLISIHQEIRDDDSYLWTLPMFHVNGWGHIYA 224
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ----LDRPVRI 306
+GA +VC R DA +F +RK +++MC AP VLN+LS E + +RI
Sbjct: 225 ITGMGAKHVCTRGVDAGDIFESVRKEDISYMCCAPTVLNMLSDYYEENDPTTTGENDIRI 284
Query: 307 LTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
TAGS PP + E G+ + H YG TE + + + ++ + +R ++K RQ
Sbjct: 285 ATAGSAPPEATIRTVEDEFGWYLKHVYGATETGPLITTSDARRTFDD-DSGDRFAIKKRQ 343
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GR 422
G+ +G TE+ +VD E G V RD + GEIV+RG +M Y PE T + D G
Sbjct: 344 GIGFLG-TEIRVVD-EDGTDVARDDASIGEIVVRGNQVMEKYWNKPEETEEAFTDRVEGY 401
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
Y+ GD+ + +G + I+DR KD+IISGGENISS E+E L+ HP +++ AV+ P W
Sbjct: 402 YHMGDLATVDENGMISIQDRKKDIIISGGENISSIELEDTLFDHPEISDVAVIPAPSDQW 461
Query: 483 QEIPCAFVSLKTGT-DSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
E P AFV ++G D G+ T D++ + R + Y V + + F++ELP TATGK+QK
Sbjct: 462 GETPKAFVVPESGDPDDPGV--TVDDLVDFTRDNLAGYKVVREIEFVEELPTTATGKIQK 519
Query: 542 YVL 544
Y L
Sbjct: 520 YEL 522
>gi|222479252|ref|YP_002565489.1| AMP-dependent synthetase and ligase [Halorubrum lacusprofundi ATCC
49239]
gi|222452154|gb|ACM56419.1| AMP-dependent synthetase and ligase [Halorubrum lacusprofundi ATCC
49239]
Length = 538
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 181/542 (33%), Positives = 278/542 (51%), Gaps = 32/542 (5%)
Query: 13 PLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ D T YT+++ R + ++ L GI G V+V+
Sbjct: 4 PLLTTDFLDRARRHYADEEAVLATDGTRYTYAELGERADRFSAVLQECGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL S +L + ++ D ++ + +
Sbjct: 64 PNTHYHLEAAYGAMQIGAVHTPLNYRLTPDDFSYMLSDAGVDAIYADAEYAANVEAI--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
+ P +T+D + ++++ LA +P ++ RP+ D D
Sbjct: 121 ---REEVPTETFLTNDADAIEGD-----------WESFDEALADANPD-AYERPEMDEDD 165
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++A + A I + V LWTLPMFH NGW +
Sbjct: 166 VITINYTSGTTGDPKGVCRTHRAETLHAYLITIHQEITDDDVYLWTLPMFHVNGWGHIYA 225
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL----SSSPEAKQLDRPVRI 306
+GA ++C R D VF IR V++ C AP VLN+L + A D VR
Sbjct: 226 ITGMGARHICTRGVDVEAVFDRIRAEDVSYFCAAPTVLNMLGDHYADHGGATTGDNDVRA 285
Query: 307 LTAG-SPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
TAG +PP A + E G+ + H YG TE + + K ++ + +R ++K Q
Sbjct: 286 ATAGAAPPEATIRTVEEEFGWDLKHVYGATETGPLVTTSDAKRHFDA-DSDDRFAVKKTQ 344
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK---DGR 422
G+ +G T+V +VD E G V DG+T GEIV+RG +M Y P+AT + +G
Sbjct: 345 GIGYLG-TDVRVVD-ENGEDVAPDGETIGEIVVRGNQVMDRYWNKPDATEEAFSERLEGY 402
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
Y+ GD+ ++ DG++ I+DR KD+IISGGENISS E+E L+ H +V++ AV+ PD W
Sbjct: 403 YHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDTLFEHDVVSDVAVIPAPDERW 462
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E P AFV ++G D T +++ + R R+ Y P V F+ ELP TATGK+QKY
Sbjct: 463 GETPKAFVVPESG-DPDDAGATPEELKAFVRERVADYKTPGEVEFVAELPTTATGKIQKY 521
Query: 543 VL 544
L
Sbjct: 522 EL 523
>gi|448677832|ref|ZP_21689022.1| medium-chain acyl-CoA ligase [Haloarcula argentinensis DSM 12282]
gi|445773507|gb|EMA24540.1| medium-chain acyl-CoA ligase [Haloarcula argentinensis DSM 12282]
Length = 539
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 279/545 (51%), Gaps = 37/545 (6%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ +T+ + R ++++++ GI G V+V+
Sbjct: 4 PLLTTDFLDRAREYYGDKEAVVATTGERFTYDEFGERADGFSAAMAARGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL IL +E V+ D+ + +
Sbjct: 64 PNTHYQLEAAYGTMQLGAVHTPLNYRLVPDDFEYILSDAEVDAVYADYEYAE------KI 117
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P + P + +T+D + ++++ ++ + + RP+ D D
Sbjct: 118 EPIRDEVPTEIFVTNDTDAVDGD-----------WESFDEIIEEAGTDYE--RPEMDEDD 164
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++ + A + + V LWTLPMFH NGW +
Sbjct: 165 LITINYTSGTTGDPKGVCRTHRTETLHAYIVALHQEISDGDVYLWTLPMFHVNGWGHIFS 224
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD------RPV 304
+GA +VC R DA +F +R V+++CGAP VLN+L+ E D V
Sbjct: 225 VTGMGAKHVCTRGVDAEGIFDAVRTEDVSYLCGAPTVLNILADRYEDHNGDIETTGANDV 284
Query: 305 RILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
RI TAGS PP V+ E G+ + H YG TE G V+ + ++ + + R S+K
Sbjct: 285 RIATAGSAPPEAVIRTVEDDFGWYLKHVYGATE-TGPLVTTSDARRFFEDGSDARFSVKK 343
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD--- 420
RQG+ +G T+V +VD E G V D +T GE+V+RG +M Y PE T + D
Sbjct: 344 RQGIGYLG-TDVRVVD-EDGNDVPHDDETLGEVVVRGNQVMDRYWNKPEQTEEAFSDRVE 401
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G Y+ GD+ + DG + I+DR KD+IISGGENISS E+E LY H V++ AV+ P
Sbjct: 402 GYYHMGDLATVDEDGMIAIRDRKKDIIISGGENISSIELEDTLYEHDAVSDVAVIPAPSD 461
Query: 481 FWQEIPCAFVSLKTGT-DSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E P AFV +G D+ G+ T +D+ + R ++ Y V + V F++ELP TATGKV
Sbjct: 462 EWGETPKAFVVPNSGDPDNPGV--TAEDLRTFTREQLATYKVVRRVEFVEELPTTATGKV 519
Query: 540 QKYVL 544
QKY L
Sbjct: 520 QKYEL 524
>gi|448688371|ref|ZP_21694204.1| medium-chain acyl-CoA ligase [Haloarcula japonica DSM 6131]
gi|445779432|gb|EMA30362.1| medium-chain acyl-CoA ligase [Haloarcula japonica DSM 6131]
Length = 539
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 281/545 (51%), Gaps = 37/545 (6%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +I+ +T+ + +R ++++++ GI G V+V+
Sbjct: 4 PLLTTDFLDRAREYYGDKEAIVATTGERFTYDEFGKRADGFSAAMAARGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL IL +E V+ D+ + +
Sbjct: 64 PNTHYQLEAAYGTMQLGAVHTPLNYRLVPDDFEYILSDAEVDAVYADYEYAE------KI 117
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P + P + +T+D + ++++ ++ + + RP+ D D
Sbjct: 118 EPIRDEVPTEIFVTNDTDAVDGD-----------WESFDEIIEEAGTDYE--RPEMDEDD 164
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++ + A + + V LWTLPMFH NGW +
Sbjct: 165 LITINYTSGTTGDPKGVCRTHRTETLHAYLVALHQELSDDDVYLWTLPMFHVNGWGHIFS 224
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD------RPV 304
+GA +VC R DA +F +R V+++CGAP VLN+L+ A + V
Sbjct: 225 VTGMGAKHVCTRGVDAEGIFDAVRTENVSYLCGAPTVLNILADRYAAHDGEIETTGANDV 284
Query: 305 RILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
RI TAGS PP V+ E G+ + H YG TE G V+ + ++ + + R S+K
Sbjct: 285 RIATAGSAPPEAVIRTVEDDFGWYLKHVYGATE-TGPLVTTSDARRFFEDGSDARFSIKK 343
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD--- 420
RQG+ +G T+V +VD E G V D +T GE+V+RG +M Y PE T++ D
Sbjct: 344 RQGIGYLG-TDVRVVD-EDGNDVPHDDETLGEVVVRGNQVMDRYWNKPEQTAEAFSDRVE 401
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G Y+ GD+ + DG + I+DR KD+IISGGENISS E+E LY H V++ AV+ P
Sbjct: 402 GYYHMGDLATVDEDGMIAIRDRKKDIIISGGENISSIELEDTLYEHDAVSDVAVIPAPSD 461
Query: 481 FWQEIPCAFVSLKTGT-DSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E P AFV +G D+ G+ T +D+ + R ++ Y V + V F++ELP TATGKV
Sbjct: 462 EWGETPKAFVVPDSGDPDNPGV--TAEDLRNFTREQLATYKVVRRVEFVEELPTTATGKV 519
Query: 540 QKYVL 544
QKY L
Sbjct: 520 QKYEL 524
>gi|448319893|ref|ZP_21509381.1| AMP-dependent synthetase and ligase [Natronococcus amylolyticus DSM
10524]
gi|445606299|gb|ELY60203.1| AMP-dependent synthetase and ligase [Natronococcus amylolyticus DSM
10524]
Length = 527
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 192/536 (35%), Positives = 271/536 (50%), Gaps = 39/536 (7%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
F++RA DD ++ +D T YT+++ R QLA +L G+ G V+++APN
Sbjct: 6 FLDRAVDLYDDVTGVVAHDGTEYTYAEVNERVNQLAHALEEGGVGQGDRVALLAPNTHYF 65
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E +A GA+F +N RL + IL + + D+ + + + P +
Sbjct: 66 IETLYATNKLGAVFVPLNYRLTSGEYEYILGDCAANTLIADYEYAEKIEPIRDSIPAETF 125
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SDLDPMVLNY 196
EI + YE +L + P RP + D +NY
Sbjct: 126 VGYRA-----DEIEGEWTD------------YEALL-EDQPTDEPDRPDIGEDDDASINY 167
Query: 197 TWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGA 256
T GTT PKGVV+ ++ A+ + LWTLPMFH NGW T+ G
Sbjct: 168 TSGTTGDPKGVVRTHRTEHWHALVLNQHMEIRDDDTYLWTLPMFHCNGWGHTYAITGTGG 227
Query: 257 TNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL----DRPVRILTAGSP 312
T+VC R FDA V +R++ VT MCGAP VLN L E + DR VRI TAGS
Sbjct: 228 THVCQRTFDAEGVLDRVREYDVTFMCGAPTVLNSLIQYHEENDVKTAGDRDVRIATAGSA 287
Query: 313 PPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIG 371
P + E + + H YG TE A + ++ + P+ +L R R LK +QG T+
Sbjct: 288 PATATIETVEDEFDWRIIHIYGLTETAPI-ITTSNSPR--RLAQRGR-ELKVKQGAETL- 342
Query: 372 LTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYYTGDV 428
T+V +VD E G V RDG T GEIV+RG +M YL P+AT + + G ++TGD+
Sbjct: 343 CTDVRVVD-EDGEDVPRDGDTIGEIVVRGNQVMDRYLNKPDATERAFSERLEGYFHTGDL 401
Query: 429 GMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCA 488
+ DG + I+DR KD+IISGGENISS E+E VLY HP V +AAV+ P W E P A
Sbjct: 402 ATIDGDGMVAIQDRKKDIIISGGENISSIELEDVLYDHPDVQKAAVIPVPSEQWGETPKA 461
Query: 489 FVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
+ G T +I+++ R+ Y P +V +++LP+TATGKVQKY L
Sbjct: 462 LI-----VPGGDADPTVDEIVEFVTDRLAGYKKPTSVEIVEDLPETATGKVQKYEL 512
>gi|406867771|gb|EKD20809.1| AMP-binding enzyme [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 574
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 191/548 (34%), Positives = 275/548 (50%), Gaps = 33/548 (6%)
Query: 14 LTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINPG-HVVSVIA 71
L+P F+ RAA D +I + T ++Y A L+ F G V ++A
Sbjct: 32 LSPTSFLPRAAAIEPDAEAIFHVTANGETLRRSYAEFADRARGLAYFLKKHGFQRVGILA 91
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN PA E F + +G + +N RL IS I ++ + VD SLL S
Sbjct: 92 PNTPAFLEAIFGIAAAGGVNVAVNYRLKTEDISYIFMFAKVDSIIVDAEYVSLL----SD 147
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS--WVRPKSDL 189
F + ++ TD S P F D L Q S W K+
Sbjct: 148 FRAQNPHVPFIIDTDTDSTEGQLSGP-------FDDAVLEGLQYDTEQGSHGWSDLKAQA 200
Query: 190 D----PMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVV---PKQSVLLWTLPMFHN 242
D + L +T GTT+ PKGVV ++ ++ A+ ++I+ + + LWTLPMFH
Sbjct: 201 DDENGTIALPFTSGTTAKPKGVVYTHRGAYLAAMGNVIESGLNYHEGRCGYLWTLPMFHA 260
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
GW+F W V T+ CLRK + P ++ L++ +TH AP V LL +S +A++L +
Sbjct: 261 MGWTFPWSVTAVRGTHYCLRKINYPLIWHLLKTENITHFNAAPTVNTLLCASKDAEKLPK 320
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
PVR+ A SPP A + + SL H YG TE G P W LP +E+ +
Sbjct: 321 PVRVTVAASPPTAHLFEQMSSLNLQPVHVYGLTETYGPITKGYHMPLWETLPPKEKYARM 380
Query: 363 ARQGVRTIGLTEVDIVDPETG----LSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM 418
ARQG I + I+ E + V +DG+ GEIV G GYL D EAT K
Sbjct: 381 ARQGHGFITGLPIRIIKTEQPEGVLIDVAKDGKEIGEIVFFGNICAKGYLDDSEATRKLF 440
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
G ++GD+ + H DG +I DR+KD+IISGGENISS +ES+L HP V EA VV
Sbjct: 441 AGGALHSGDLAVWHEDGSAQILDRAKDIIISGGENISSVALESMLVQHPDVLEAGVVSVA 500
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPKTAT 536
D W E P AF++++ G G +D+I++ + + I ++MVP+ V ++ELPKT+T
Sbjct: 501 DSHWGERPKAFITVQEGRTLRG-----EDLIEWSKHESAISKFMVPREVEVVNELPKTST 555
Query: 537 GKVQKYVL 544
GK++K VL
Sbjct: 556 GKIKKNVL 563
>gi|315055349|ref|XP_003177049.1| luciferin 4-monooxygenase [Arthroderma gypseum CBS 118893]
gi|311338895|gb|EFQ98097.1| luciferin 4-monooxygenase [Arthroderma gypseum CBS 118893]
Length = 574
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 186/557 (33%), Positives = 283/557 (50%), Gaps = 27/557 (4%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTTYTW--SQTYRRCLQLASSLSSFGINPGHV- 66
N L+P F+ RAA D +I Y+ TT +TY++ A L+ + G+
Sbjct: 28 NRHTLSPTFFLPRAAEIEPDAEAI-YHLTTNNKIVRKTYQQFADRARGLAYYIKKHGYKR 86
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V ++APN P E F + +GA+ IN RL A I+ I H++ + VD
Sbjct: 87 VGILAPNTPGFLESIFGIAAAGAVNVAINYRLKAEDIAYIFTHADVDSIIVDK------- 139
Query: 127 EVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD--TYENMLAKGDPQFSWVR 184
E V L K+ + + + D + + A ++ Y+ +
Sbjct: 140 EFVPLLDKFRKSSQHIPLIVDTDTDADEGELSGELDAAVLEGLQYDGQQGGLGWGGLEAQ 199
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSV---LLWTLPMFH 241
+ + L YT GTT+ PKGV ++ ++ A+ ++++ + Q LW LPMFH
Sbjct: 200 AADEESLIALAYTSGTTARPKGVEYIHRGCYLAALGNIVESGLNFQQGRCGYLWILPMFH 259
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD 301
GW+F W V T+ CLRK D P ++ ++++ +TH AP V LL ++ EA++L
Sbjct: 260 AMGWTFPWSVTAVRGTHYCLRKIDYPEIWRMLKQENITHFNAAPTVNTLLCAAKEAERLS 319
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
RPVR+ A SPP A + + S+ H YG TE G P W+ +P +E+
Sbjct: 320 RPVRVTVAASPPTAHLFEQMTSVNLHPVHVYGLTETYGPITKGYHMPSWDTIPLKEKYKR 379
Query: 362 KARQGVRTIGLTEVDIVD---PE-TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
ARQG + ++ PE T + V +DG+ GEIV G GY KD AT K
Sbjct: 380 MARQGHGFLTSLPARVIKTDVPEGTIVDVSKDGKEIGEIVFTGNICARGYYKDVAATDKL 439
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++GD+ + HPDG ++I DR+KD+IISGGENISS +E++L +HP + EA VV
Sbjct: 440 FAGGVLHSGDLAVWHPDGAIQILDRAKDIIISGGENISSVALEAMLATHPDILEAGVVAV 499
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPKTA 535
D W E P A+V+++TG T +II + + + I R+MVP+ V + ELPKT+
Sbjct: 500 SDAHWGERPKAYVTIQTGK-----QVTGPEIIVWAKNSSGISRFMVPREVEIVPELPKTS 554
Query: 536 TGKVQKYVLGDIANSMS 552
TGK++K VL + A S
Sbjct: 555 TGKIKKNVLREWAKGAS 571
>gi|55377684|ref|YP_135534.1| medium-chain acyl-CoA ligase [Haloarcula marismortui ATCC 43049]
gi|448659233|ref|ZP_21683201.1| medium-chain acyl-CoA ligase [Haloarcula californiae ATCC 33799]
gi|55230409|gb|AAV45828.1| medium-chain acyl-CoA ligase [Haloarcula marismortui ATCC 43049]
gi|445760735|gb|EMA11992.1| medium-chain acyl-CoA ligase [Haloarcula californiae ATCC 33799]
Length = 539
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 279/545 (51%), Gaps = 37/545 (6%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +I+ +T+ + R ++++++ GI G V+V+
Sbjct: 4 PLLTTDFLDRAREYYGDKEAIVATTGERFTYDEFGERADGFSAAMAARGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL IL +E V+ D+ + +
Sbjct: 64 PNTHYQLEAAYGTMQLGAVHTPLNYRLVPDDFEYILSDAEVDAVYADYEYAD------KI 117
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P + P + +T+D + ++++ ++ + + RP+ D D
Sbjct: 118 EPIRDEVPTDIFVTNDTDAVDGD-----------WESFDEIIEEAGTDYE--RPEMDEDD 164
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++ + A + + V LWTLPMFH NGW +
Sbjct: 165 LITINYTSGTTGDPKGVCRTHRTETLHAYIVALHQEISDDDVYLWTLPMFHVNGWGHIFS 224
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD------RPV 304
+GA +VC R DA +F +R V+++CGAP VLN+L+ A + V
Sbjct: 225 VTGMGAKHVCTRGVDAEGIFDAVRTEDVSYLCGAPTVLNILADRYAAHDGEIETTGANDV 284
Query: 305 RILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
RI TAGS PP V+ E G+ + H YG TE G V+ + ++ + + R S+K
Sbjct: 285 RIATAGSAPPEAVIRTVEDDFGWYLKHVYGATE-TGPLVTTSDARRFFEDGSNARFSVKK 343
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD--- 420
RQG+ +G T+V +VD E G V D +T GE+V+RG +M Y PE T + D
Sbjct: 344 RQGIGYLG-TDVRVVD-EDGNDVPHDDETLGEVVVRGNQVMDRYWNKPEQTEEAFSDRVE 401
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G Y+ GD+ + DG + I+DR KD+IISGGENISS E+E LY H V++ AV+ P
Sbjct: 402 GYYHMGDLATVDEDGMVAIRDRKKDIIISGGENISSIELEDTLYEHDAVSDVAVIPAPSD 461
Query: 481 FWQEIPCAFVSLKTGT-DSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E P AFV +G D+ G+ T +D+ + R ++ Y V + V F++ELP TATGKV
Sbjct: 462 EWGETPKAFVVPNSGDPDNPGV--TAEDLRTFTREQLATYKVVRRVEFVEELPTTATGKV 519
Query: 540 QKYVL 544
QKY L
Sbjct: 520 QKYEL 524
>gi|448633792|ref|ZP_21674291.1| medium-chain acyl-CoA ligase [Haloarcula vallismortis ATCC 29715]
gi|445750483|gb|EMA01921.1| medium-chain acyl-CoA ligase [Haloarcula vallismortis ATCC 29715]
Length = 539
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 187/545 (34%), Positives = 278/545 (51%), Gaps = 37/545 (6%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ +T+++ R ++++++ GI G V+V+
Sbjct: 4 PLLTTDFLDRAREYYGDEEAVVATTGERFTYNEFGERADGFSAAMAARGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL IL +E V+ D+ + +
Sbjct: 64 PNTHYHLEAAYGTMQLGAVHTPLNYRLVPDDFEYILSDAEVDAVYADYEYAE------KI 117
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P P + +T+D + D+ E + A G + RP+ D D
Sbjct: 118 EPIRDDVPTEIFVTNDTDAVD----------GDWESFDEIIEAAG---TDYERPEMDEDD 164
Query: 192 -MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
+ +NYT GTT PKGVV+ ++ + A + + V LWTLPMFH NGW +
Sbjct: 165 DITINYTSGTTGDPKGVVRTHRTETLHAYLVALHQELSDDDVYLWTLPMFHVNGWGHIFS 224
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD------RPV 304
+GA +VC R DA +F +R V+++CGAP VLN+LS + + V
Sbjct: 225 VTGMGAKHVCTRGVDAKGIFDAVRTEDVSYLCGAPTVLNILSDRYKDHNGEIETTGANDV 284
Query: 305 RILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
RI TAGS PP V+ E G+ + H YG TE G V+ + ++ + + R S+K
Sbjct: 285 RIATAGSAPPEAVIRTVEDDFGWYLKHVYGATE-TGPLVTTSDARRFFEDGSDARFSVKK 343
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD--- 420
RQG+ +G T+V +VD E G V D +T GE+V+RG +M Y PE T + D
Sbjct: 344 RQGIGYLG-TDVRVVD-EDGNDVPHDDETLGEVVVRGNQVMDRYWNKPEQTEEAFSDRVE 401
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G Y+ GD+ + DG + I+DR KD+IISGGENISS E+E LY H V++ AV+ P
Sbjct: 402 GYYHMGDLATVDEDGMVAIRDRKKDIIISGGENISSIELEDTLYEHDAVSDVAVIPAPSD 461
Query: 481 FWQEIPCAFVSLKTG-TDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E P AFV +G TD G+ T +D+ + R ++ Y V + V F++ELP TATGKV
Sbjct: 462 EWGETPKAFVVPNSGDTDDPGV--TAEDLRNFTREQLATYKVVRRVEFVEELPTTATGKV 519
Query: 540 QKYVL 544
QKY L
Sbjct: 520 QKYEL 524
>gi|344211763|ref|YP_004796083.1| medium-chain acyl-CoA ligase [Haloarcula hispanica ATCC 33960]
gi|343783118|gb|AEM57095.1| medium-chain acyl-CoA ligase [Haloarcula hispanica ATCC 33960]
Length = 539
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 181/545 (33%), Positives = 278/545 (51%), Gaps = 37/545 (6%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ +T+ + R ++++++ GI G V+V+
Sbjct: 4 PLLTTDFLDRAREYYGDKEAVVATTGERFTYDEFGERADGFSAAMAARGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL IL +E V+ D+ + +
Sbjct: 64 PNTHYQLEAAYGTMQLGAVHTPLNYRLVPDDFEYILSDAEVDAVYADYEYAD------KI 117
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P + P + +T+D + ++++ ++ + + RP+ D D
Sbjct: 118 EPIRDEVPTDIFVTNDTDAVDGD-----------WESFDEIIEEAGTDYE--RPEMDEDD 164
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++ + A + + V LWTLPMFH NGW +
Sbjct: 165 LITINYTSGTTGDPKGVCRTHRTETLHAYIVALHQEISDDDVYLWTLPMFHVNGWGHIFS 224
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD------RPV 304
+GA +VC R DA +F +R V+++CGAP VLN+L+ E + V
Sbjct: 225 VTGMGAKHVCTRGVDAEGIFDAVRTEDVSYLCGAPTVLNILADRYEDHDGEIETTGANDV 284
Query: 305 RILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
RI TAGS PP V+ E G+ + H YG TE G V+ + ++ + + R S+K
Sbjct: 285 RIATAGSAPPEAVIRTVEDDFGWYLKHVYGATE-TGPLVTTSDARRFFEDGSDARFSVKK 343
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD--- 420
RQG+ +G T+V +VD E G V D +T GE+V+RG +M Y PE T + D
Sbjct: 344 RQGIGYLG-TDVRVVD-EDGNDVPHDDETLGEVVVRGNQVMDRYWNKPEQTEEAFSDRVE 401
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G Y+ GD+ + DG + I+DR KD+IISGGENISS E+E LY H V++ AV+ P
Sbjct: 402 GYYHMGDLATVDEDGMIAIRDRKKDIIISGGENISSIELEDTLYEHDAVSDVAVIPAPSD 461
Query: 481 FWQEIPCAFVSLKTGT-DSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E P AFV +G D+ G+ T +D+ + R + Y V + V F++ELP TATGKV
Sbjct: 462 EWGETPKAFVVPNSGDPDNPGV--TAEDLRNFTREELATYKVVRRVEFVEELPTTATGKV 519
Query: 540 QKYVL 544
QKY L
Sbjct: 520 QKYEL 524
>gi|427706423|ref|YP_007048800.1| o-succinylbenzoate--CoA ligase [Nostoc sp. PCC 7107]
gi|427358928|gb|AFY41650.1| o-succinylbenzoate--CoA ligase [Nostoc sp. PCC 7107]
Length = 542
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 189/552 (34%), Positives = 292/552 (52%), Gaps = 32/552 (5%)
Query: 13 PLTPLGFIERAATACDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAP 72
PL+P F+ER+ A + +I +T T++Q R LA L G+ G V++++
Sbjct: 7 PLSPTTFLERSGQAFANRTAIASPNTKVTYAQLLHRSRCLAQVLKRLGVEYGDRVALLSE 66
Query: 73 NIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLF 132
N E HF++P GA+ +N L + I L + E+K++ +D S +L L
Sbjct: 67 NNQQTIEAHFSIPAVGAVIVALNPWLAVQDIGFQLDYCEAKVLIIDAAFSEKILLYSQLA 126
Query: 133 PPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD-LDP 191
H + K+++I + +++P + ++D YE LA + F + D LDP
Sbjct: 127 FDHLQ--KIIVI------NGATNPAY----SGYLD-YETCLAGENGDFRLDQTIVDELDP 173
Query: 192 MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGA 251
+ +N+T GTT PKGV+ ++A ++ A+ + + + S LW LPMFH NGW W
Sbjct: 174 ICINFTSGTTGRPKGVMSSHRAAYLNALGQALMIGLNRSSKYLWLLPMFHVNGWGHMWVN 233
Query: 252 AVVGATNVCL---RKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILT 308
VGAT + L + DA TV + + +TH+ GAP ++ L+ P K + I T
Sbjct: 234 VAVGATQIILPGDQIRDASTVCQAVAGYKITHLSGAPRLVRSLAFVPGDKAAFDGLTITT 293
Query: 309 AGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVR 368
G+ P ++ R + +G + H YG E G C + W +L RA + RQGV
Sbjct: 294 GGAAPAPTLIERLDEMGVKLIHQYGLNETFGPYTVCEEQEDWQELSPASRALKRGRQGVA 353
Query: 369 TIGL-TEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGD 427
TI T + +VD T V DG T GE+++ G ++ GY +PEAT+K +G ++TGD
Sbjct: 354 TIHAGTGLRVVDA-TSQDVPWDGSTLGEVIVAGNTVATGYYNNPEATAKAFCNGWFHTGD 412
Query: 428 VGMMHPDGYLEIKDRSKDVII----SGGENISSTEIESVLYSHPMVNEAAVVG-RPDPFW 482
V ++HPDGYLEI+DR KD+I G ENISS EIE+VL H V +AAV+G P+
Sbjct: 413 VAIIHPDGYLEIRDRMKDLIYVETEYGWENISSIEIENVLCQHEQVRDAAVIGISPEELG 472
Query: 483 QE--IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
+ + AF+ + T++D+ ++C +R+ Y P+ F D LPKTATGKV+
Sbjct: 473 RNSTLLVAFIEVWESQS-----ITKEDLRRFCESRLSAYKQPEVFFFTD-LPKTATGKVR 526
Query: 541 KYVLGDIANSMS 552
K VL A ++S
Sbjct: 527 KDVLVKEALNLS 538
>gi|346971387|gb|EGY14839.1| 2-succinylbenzoate-CoA ligase [Verticillium dahliae VdLs.17]
Length = 580
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 194/556 (34%), Positives = 287/556 (51%), Gaps = 33/556 (5%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINPG-HVV 67
N L+P F+ERAA D +I + T ++Y A L+ + I G V
Sbjct: 35 NVHQLSPTFFLERAAAIEPDAEAIFHVTANGKTLRRSYCEFADRARGLAYYLIKHGLRRV 94
Query: 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLE 127
++APN PA E F + +G + +N RL I+ I +E + +D + LL +
Sbjct: 95 GILAPNTPAFLESIFGIAAAGGVNVAVNYRLKPDDINYIFDFAEVDSIIIDAEFAHLLDD 154
Query: 128 VVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENML----AKGDPQFSWV 183
P + ++ TD S P F D L A+G ++ +
Sbjct: 155 FKKSHP----SVHFLIDTDTDATEGQLSGP-------FDDAVLEGLQYDRAQGAKGWAGL 203
Query: 184 RPK--SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVP---KQSVLLWTLP 238
+ + S+ D + + +T GTTS PKGVV ++ ++ A+ ++I+ + + LWTLP
Sbjct: 204 QSQCASEDDMISIPFTSGTTSRPKGVVYTHRGAYLAAMGNIIESGLNYHVGRCKYLWTLP 263
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK 298
MFH GW+F W V T+VCLRK D P ++ L+++ G+TH AP V LL S+ EA+
Sbjct: 264 MFHAMGWTFPWSITAVRGTHVCLRKIDYPLIWKLLKEEGITHFNAAPTVNTLLCSAKEAE 323
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
+L + VR+ A SPP + + +L H YG TE G P W+ L +R
Sbjct: 324 KLPQEVRVTVAASPPSGHLFEQMTNLNLHPVHVYGLTETYGPITKGYQMPSWDALSPSDR 383
Query: 359 ASLKARQGVRTIGLTEVDIVD---PETGL-SVKRDGQTRGEIVMRGGSLMLGYLKDPEAT 414
+ ARQG + + I+ PE L V RDG+ GEIV G Y KD EAT
Sbjct: 384 YAKMARQGHGFVTSLPIRIIKTDLPEGELVDVARDGKEIGEIVFFGNICAKEYYKDAEAT 443
Query: 415 SKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474
K G ++GD+ + HPDG +I DR+KD+IISGGENISS +ES+L HP + EAAV
Sbjct: 444 RKLFAGGALHSGDLAVWHPDGSAQILDRAKDIIISGGENISSVALESMLVQHPDLLEAAV 503
Query: 475 VGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELP 532
V PD W E P A+V++K G G +D+I + + + I ++MVP+ V ++ELP
Sbjct: 504 VAVPDSHWGERPKAYVTVKEGRQVAG-----EDVISWAKHQSNISKFMVPREVEVVEELP 558
Query: 533 KTATGKVQKYVLGDIA 548
KT+TGK++K VL + A
Sbjct: 559 KTSTGKLKKNVLREWA 574
>gi|389632329|ref|XP_003713817.1| AMP-binding domain-containing protein [Magnaporthe oryzae 70-15]
gi|351646150|gb|EHA54010.1| AMP-binding domain-containing protein [Magnaporthe oryzae 70-15]
gi|440475778|gb|ELQ44440.1| AMP-dependent synthetase and ligase [Magnaporthe oryzae Y34]
gi|440489386|gb|ELQ69042.1| AMP-dependent synthetase and ligase [Magnaporthe oryzae P131]
Length = 587
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 189/559 (33%), Positives = 282/559 (50%), Gaps = 22/559 (3%)
Query: 5 KPNPANSCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINP 63
+PN ++ L+P F++RAA + ++++ T ++Y A L+ +
Sbjct: 30 RPNHLHA--LSPTLFLQRAAAIEPEAEAVVHVTANGRTLRRSYAELADRARGLAYYLAKK 87
Query: 64 GHV-VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSS 122
G V ++APN PA E + V SG + +N RL I+ I + + + VD
Sbjct: 88 GFFRVGILAPNTPAFLESIYGVNASGGVIVPVNYRLKQEDIAYIFEFANVDAIIVD---- 143
Query: 123 SLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
+ + ++ L+ L++ TD S P A + KG
Sbjct: 144 AEFVGLLELYQKDHVNVPLIIDTDTDATEGELSGPFDECIAQGLQHDREAGGKGWDGLCQ 203
Query: 183 VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIA----VDSLIDWVVPKQSVLLWTLP 238
+P + D + + +T GTTS PKGV ++ ++ A V+S +++ V + LWTLP
Sbjct: 204 -QPNDEDDIIAIPFTSGTTSKPKGVEYTHRGAYLAALANIVESGLNYNVGR-CKYLWTLP 261
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK 298
MFH GW+F W V T+VCLRK D P ++ L+ VTH AP V LL ++ EA+
Sbjct: 262 MFHAVGWTFPWAVTAVRGTHVCLRKIDYPLIWRLLTGERVTHFNAAPTVCTLLCAADEAQ 321
Query: 299 QL-DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
+L D PVR+ A SPP A + + L H YG TE G P W LP +
Sbjct: 322 RLPDPPVRVTVAASPPTAHLFRQMTELNLSPVHVYGMTETYGPITKGYHMPAWETLPEAD 381
Query: 358 RASLKARQGVRTIGLTEVDIVDPETG-----LSVKRDGQTRGEIVMRGGSLMLGYLKDPE 412
+ + ARQG + + IV PE + V +DG GEIV G GY DPE
Sbjct: 382 KFARMARQGHGFLTSLPIRIVKPEEAENGVLIDVAKDGVEIGEIVFAGNICAKGYYNDPE 441
Query: 413 ATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEA 472
AT K G ++GD+ + HPDG +I DR KD+IISGGENISS +ES+L HP V EA
Sbjct: 442 ATKKMFAGGVLHSGDLAVWHPDGSAQILDRQKDIIISGGENISSVALESMLVQHPDVLEA 501
Query: 473 AVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRAR--IPRYMVPKTVVFIDE 530
VV PD W E P A+V+++ ++G T + +I + + + I ++M+P+ V +DE
Sbjct: 502 GVVAVPDSHWGERPKAYVTVRRSKEAGMEPLTGQGLIDWAKHQSAISKFMIPREVEIVDE 561
Query: 531 LPKTATGKVQKYVLGDIAN 549
LPKT+TGK++K L + A
Sbjct: 562 LPKTSTGKIKKNELREWAK 580
>gi|448561330|ref|ZP_21634682.1| acyl-CoA synthetase [Haloferax prahovense DSM 18310]
gi|445721562|gb|ELZ73230.1| acyl-CoA synthetase [Haloferax prahovense DSM 18310]
Length = 540
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 186/543 (34%), Positives = 284/543 (52%), Gaps = 32/543 (5%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ +T+ + R +++L S G+ G V+V+
Sbjct: 4 PLLVTEFLDRARRYYGDEEAVVATTGERFTYDELGERADGFSAALQSRGVEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL +L ++ V+ D+ + + EV
Sbjct: 64 PNTHYHLEAAYGSMQLGAVHMPLNYRLVPADFEYMLNDADVTAVYADYAFAEKIDEV--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
+ P + +T+D E ++ S+ +++D ++ ++A+ + RP+ D D
Sbjct: 121 ---RDEIPTEIFVTNDPEKAAESTD------GEWLD-FDELVAE---STDYERPEMDEDD 167
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
+V +NYT GTT PKGV + ++A I A + + V LWTLPMFH NGW +
Sbjct: 168 IVTINYTSGTTGDPKGVCRTHRAETIHAYLVSMHQDIADDDVYLWTLPMFHVNGWGHIYA 227
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAKQLD----RPVR 305
GA +VC R DA TV IR V+++C AP VLN L+ EA ++ PVR
Sbjct: 228 ITGHGAKHVCTRGVDAETVLDAIRDEDVSYLCAAPTVLNILMKHYREAGGVETTGASPVR 287
Query: 306 ILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
TAG+ PP + E G+ + H YG TE G ++ + ++ +R +K +
Sbjct: 288 AATAGAAPPEATIRTVEDEFGWRLMHVYGATE-TGPLITTSEAGRY-LTDGDDRFGVKKK 345
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK---DG 421
QG+ +G T+V +VD E G V RD Q+ GEIV+ G +M Y PE T + +G
Sbjct: 346 QGIGYLG-TDVRVVD-EDGTDVPRDDQSIGEIVVAGNQVMEKYWNKPEETEEAFSARLEG 403
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
Y+ GD+ ++ +G++ I+DR KD+IISGGENISS E+E L+ H V + AV+ P
Sbjct: 404 YYHMGDLAVVDENGFISIQDRKKDIIISGGENISSIELEDTLFDHDAVGDVAVIPVPSDE 463
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P AFV +G +T E +I++CR RI Y VPK + F+ ELPKTATGK+QK
Sbjct: 464 WGESPKAFVVPTSGDPDAPGVTAEA-LIEFCRERIATYKVPKEIEFVAELPKTATGKIQK 522
Query: 542 YVL 544
Y L
Sbjct: 523 YEL 525
>gi|399575348|ref|ZP_10769106.1| AMP-dependent synthetase and ligase [Halogranum salarium B-1]
gi|399239616|gb|EJN60542.1| AMP-dependent synthetase and ligase [Halogranum salarium B-1]
Length = 536
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 188/546 (34%), Positives = 271/546 (49%), Gaps = 46/546 (8%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ YT+ + R +++L S GI G V+V+
Sbjct: 4 PLLATDFLDRARRHYGDQEAVLATTGERYTYDELGARVDGFSAALQSRGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GAI +N RL A IL + K ++ D+ + + E+
Sbjct: 64 PNTHYHLEAAYGSMQLGAIHTPLNYRLVASDFEYILNDAGVKAIYADYKFADRIQEI--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS----WVRPKS 187
P + IT+D VD E D + + RP+
Sbjct: 121 ---RDDVPTELFITND------------------VDAVEGEWESFDELVTDSTDYERPEM 159
Query: 188 DL-DPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
D D + +NYT GTT PKGV + ++ + A I + V LWTLPMFH NGW
Sbjct: 160 DESDIITINYTSGTTGDPKGVCRSHRTETLHAYLISIHQEISDNDVYLWTLPMFHVNGWG 219
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSS-----SPEAKQLD 301
+ GA ++C R DA +F I+ V++ C AP VLN+L+ PE +
Sbjct: 220 HIYAITGAGARHICTRGIDAGEIFERIQTEDVSYFCAAPTVLNMLAEYYQKHDPETTGAN 279
Query: 302 RPVRILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
PVR TAG+ PP + E G+ + H YG TE G ++ + ++ + +R +
Sbjct: 280 -PVRAATAGAAPPEATIRAVEDDFGWYLHHVYGATE-TGPLITTSDARRFFDQESSDRFA 337
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
+K QG+ +G TEV +VD + G V DG T GEIV+RG +M Y + PE T + D
Sbjct: 338 IKKTQGIGYLG-TEVRVVDDD-GNDVAEDGTTVGEIVVRGNQVMDSYWEKPEETEEAFND 395
Query: 421 ---GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G Y+ GD+ + G++ I+DR KD+IISGGENISS E+E L+ H V + AV+
Sbjct: 396 RVEGYYHMGDLATVDEHGFITIQDRKKDIIISGGENISSIELEDTLFEHDAVADVAVIPA 455
Query: 478 PDPFWQEIPCAFVSLKTGT-DSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
P W E P AF+ G D+ G+ TE++I +CR RI Y VP V F+ ELPKTAT
Sbjct: 456 PSDKWGETPKAFLVPANGDPDNPGV--TEEEIKAFCRERIASYKVPGEVEFVTELPKTAT 513
Query: 537 GKVQKY 542
GK+QKY
Sbjct: 514 GKIQKY 519
>gi|358055685|dbj|GAA98030.1| hypothetical protein E5Q_04710 [Mixia osmundae IAM 14324]
Length = 571
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 179/555 (32%), Positives = 281/555 (50%), Gaps = 44/555 (7%)
Query: 8 PANSCPLTPLGFIERAATACDDCPSIIY--NDTTYTWSQTYRRCLQLASSLSSFGINPGH 65
P N PL P+ F+ R+A+ + +I Y ++T++Q RR LA +L GI+ G
Sbjct: 38 PVNYSPLNPVTFLLRSASVYPNKEAIWYPEKQQSFTFAQFARRVSYLAYALKDAGISTGD 97
Query: 66 VVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLL 125
V+V+APN P + + AVP + AI + IN RL + IL+ S +KLV VDH + L+
Sbjct: 98 RVAVLAPNTPTIATVLQAVPAARAIVSPINIRLAKDDVDYILEFSGAKLVVVDHQFAHLV 157
Query: 126 LEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP----QFS 181
+ K+V+ + D +E MLA+G Q
Sbjct: 158 ---------EGTSAKVVVCKGEAG-----------------DAFETMLARGREISLKQRG 191
Query: 182 WVRPKSDLDP---MVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLP 238
W + + D + LN+T GT+ PKGV+ ++ ++ A+ + + + +S LWTLP
Sbjct: 192 WQGLELEADEHRSISLNWTSGTSGRPKGVLTSLRSTYLAALSNAHETNLRPESSYLWTLP 251
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDA-PTVFALIRKHGVTHMCGAPIVLNLLSSSPEA 297
FH +GW F + +C+R + ++ ++ VTH C AP V L + P+A
Sbjct: 252 QFHCSGWKFPYACQAAMCRQICIRGVGTYDEIHDMLARNQVTHFCAAPTVCISLVNHPKA 311
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE 357
++L+RPV+ + AG+ P A ++ + E + +V YG TE G P+ + L
Sbjct: 312 RRLERPVKAMLAGAAPTASLIKKMEDINILVISSYGLTETLGPVTINYPLPEHDDLDDDL 371
Query: 358 RASLKARQGVRTIGLTEVDIV------DPETG--LSVKRDGQTRGEIVMRGGSLMLGYLK 409
R +L+ARQG + E +V DP+ G + D + GE+ +RG +M GY
Sbjct: 372 RYTLRARQGQSFLNADEARVVKVVEGGDPDFGPFEEIASDDKEIGEVTIRGNIVMQGYYN 431
Query: 410 DPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMV 469
+ +AT K G +++GD+ PDG + IKDR+KD+ ISGGENIS+ +E+ L H V
Sbjct: 432 NKKATDKAFAGGFFHSGDLASRGPDGVIHIKDRAKDICISGGENISTLAVENALAGHADV 491
Query: 470 NEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFID 529
E AV+ + D W E PCA V L+ E ++ Y + ++ Y P V+ +
Sbjct: 492 LEVAVIAKKDEKWGERPCAIVVLRDPKRWPDHAAFETELKAYAKTKLSGYARPHVVIIVP 551
Query: 530 ELPKTATGKVQKYVL 544
ELPKT+TGK+QK L
Sbjct: 552 ELPKTSTGKIQKVKL 566
>gi|50548333|ref|XP_501636.1| YALI0C09284p [Yarrowia lipolytica]
gi|49647503|emb|CAG81939.1| YALI0C09284p [Yarrowia lipolytica CLIB122]
Length = 585
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 183/558 (32%), Positives = 289/558 (51%), Gaps = 33/558 (5%)
Query: 6 PNPANSCPLTPLGFIERAATACDDCPSIIYNDT-----TYTWSQTYRRCLQLASSLSSFG 60
P+ N + P F+ RAA + + I+ T+ + R L LA+ S
Sbjct: 39 PDKVNRHNMNPTYFLPRAAEIEPNAKAYIHKGADGVRVERTYGEMADRVLGLATYFKSKE 98
Query: 61 INPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHL 120
V++ PN PA E F +GA +N RL I+ ++ ++ V VD
Sbjct: 99 FKR---VAICGPNTPAHLETMFGAVAAGAYVLGLNYRLTMGEITYKMELGDADCVVVDR- 154
Query: 121 SSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQF 180
E V L P + V++ DD +S P I ++ V + M + +
Sbjct: 155 ------EFVHLISPEIRAKCQVIVDDDVSGASKPQQPGEILYSNVVQ--QGMQLAKEQKT 206
Query: 181 SW----VRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSV---- 232
+W V+ + + + + L YT GTT PK V +++ ++ A+ ++I+ + ++V
Sbjct: 207 TWDNLHVQNEDEDEILGLFYTSGTTGKPKAVEYTHRSVYLCAMSNIIEAGLNCETVDGHN 266
Query: 233 ---LLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN 289
LWTLP+FH GW+F + V T+V LRK + ++ L+ +TH AP V N
Sbjct: 267 RCHYLWTLPLFHAAGWTFPYSVTAVRGTHVLLRKIEPDYIWDLLVDDRITHFNAAPTVNN 326
Query: 290 LLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPK 349
+L ++P+A++L + VR+ A SPP A + + + H YG TE G V +
Sbjct: 327 MLVNNPKARRLPQTVRVTVAASPPSAALFNKMFDMNLHPVHMYGLTESYGPFVRNYFLQD 386
Query: 350 WNKLPARERASLKARQGVRTIGLTEVDIV-DPETGLSVKRDGQTRGEIVMRGGSLMLGYL 408
W+ ER +L ARQG +G V ++ + + V R+GQ GEIV RG ++M Y
Sbjct: 387 WHGATGDERYALMARQGFAFVGSQSVQVIANNDINQPVPRNGQEIGEIVCRGNAVMARYH 446
Query: 409 KDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPM 468
KDPEAT+K + G ++TGD+ +++PDG ++I DR KD+IISGGENISS +E ++ +
Sbjct: 447 KDPEATAKAFEQGWFHTGDLAVVNPDGSIKILDRKKDIIISGGENISSVAVEGIICKYDN 506
Query: 469 VNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFI 528
V E AVVG PD + E+P AF+ LK D T+K +I + R R+ Y +P+ V +
Sbjct: 507 VLEVAVVGIPDEKYGEVPKAFLILK---DKSKPFDTDK-MIAWMRERMGAYQIPRQVSVV 562
Query: 529 DELPKTATGKVQKYVLGD 546
D+LP+T+TGK++K VL D
Sbjct: 563 DDLPRTSTGKIKKNVLRD 580
>gi|448666703|ref|ZP_21685348.1| medium-chain acyl-CoA ligase [Haloarcula amylolytica JCM 13557]
gi|445771834|gb|EMA22890.1| medium-chain acyl-CoA ligase [Haloarcula amylolytica JCM 13557]
Length = 539
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 180/545 (33%), Positives = 278/545 (51%), Gaps = 37/545 (6%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ +T+ + R ++++++ GI G V+V+
Sbjct: 4 PLLTTDFLDRAREYYGDKEAVVATTGERFTYDEFGERADGFSAAMAARGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL IL +E V+ D+ + +
Sbjct: 64 PNTHYQLEAAYGTMQLGAVHTPLNYRLVPDDFEYILSDAEVDAVYADYEYAD------KI 117
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P + P + +T+D + ++++ ++ + + RP+ D D
Sbjct: 118 EPIRDEVPTDIFVTNDTDAVDGD-----------WESFDEIIEEAGTDYE--RPEMDEDD 164
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++ + A + + V LWTLPMFH NGW +
Sbjct: 165 LITINYTSGTTGDPKGVCRTHRTETLHAYIVALHQEISDDDVYLWTLPMFHVNGWGHIFS 224
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD------RPV 304
+GA +VC R DA +F +R V+++CGAP VLN+L+ E + V
Sbjct: 225 VTGMGAKHVCTRGVDAEGIFDAVRTEDVSYLCGAPTVLNILADRYEDHDGEIETTGANDV 284
Query: 305 RILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
RI TAGS PP V+ E G+ + H YG TE G V+ + ++ + + R S+K
Sbjct: 285 RIATAGSAPPEAVIRTVEDDFGWYLKHVYGATE-TGPLVTTSDARRFFEDGSDARFSVKK 343
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD--- 420
RQG+ +G T+V +VD E G V D +T GE+V+RG +M Y PE T + D
Sbjct: 344 RQGIGYLG-TDVRVVD-EDGNDVPHDDETLGEVVVRGNQVMDRYWNKPEQTEEAFSDRVE 401
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G Y+ GD+ + DG + I+DR KD+IISGGENISS E+E LY H V++ AV+ P
Sbjct: 402 GYYHMGDLATVDEDGMIAIRDRKKDIIISGGENISSIELEDTLYEHDAVSDVAVIPAPSD 461
Query: 481 FWQEIPCAFVSLKTGT-DSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E P AFV +G D+ G+ T +D+ + R + Y V + V F+++LP TATGKV
Sbjct: 462 EWGETPKAFVVPNSGDPDNPGV--TAEDLRNFTREELATYKVVRRVEFVEQLPTTATGKV 519
Query: 540 QKYVL 544
QKY L
Sbjct: 520 QKYEL 524
>gi|448639827|ref|ZP_21676975.1| medium-chain acyl-CoA ligase [Haloarcula sinaiiensis ATCC 33800]
gi|445762354|gb|EMA13575.1| medium-chain acyl-CoA ligase [Haloarcula sinaiiensis ATCC 33800]
Length = 539
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 181/545 (33%), Positives = 280/545 (51%), Gaps = 37/545 (6%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA + +I+ +T+ + R ++++++ GI G V+V+
Sbjct: 4 PLLTTDFLDRAREYYGEKEAIVATTGERFTYDEFGERADGFSAAMAARGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL IL +E V+ D+ + +
Sbjct: 64 PNTHYQLEAAYGTMQLGAVHTPLNYRLVPDDFEYILSDAEVDAVYADYEYAD------KI 117
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P + P + +T+D + +++++++ + + RP+ D D
Sbjct: 118 EPIRDEVPTDIFVTNDTDAVDGD-----------WESFDDIIEEAGTDYE--RPEMDEDD 164
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++ + A + + V LWTLPMFH NGW +
Sbjct: 165 LITINYTSGTTGDPKGVCRTHRTETLHAYIVALHQEISDDDVYLWTLPMFHVNGWGHIFS 224
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD------RPV 304
+GA +VC R DA +F +R V+++CGAP VLN+L+ A + V
Sbjct: 225 VTGMGAKHVCTRGVDAEGIFDAVRTEDVSYLCGAPTVLNILADRYAAHDGEIETTGANDV 284
Query: 305 RILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
RI TAGS PP V+ E G+ + H YG TE G V+ + ++ + + R S+K
Sbjct: 285 RIATAGSAPPEAVIRTVEDDFGWYLKHVYGATE-TGPLVTTSDARRFFEDGSDARFSVKK 343
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD--- 420
RQG+ +G T+V +VD E G V D +T GE+V+RG +M Y PE T + D
Sbjct: 344 RQGIGYLG-TDVRVVD-EDGNDVPHDDETLGEVVVRGNQVMDRYWNKPEQTEEAFSDRVE 401
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G Y+ GD+ + DG + I+DR KD+IISGGENISS E+E LY H V++ AV+ P
Sbjct: 402 GYYHMGDLATVDEDGMVAIRDRKKDIIISGGENISSIELEDTLYEHDAVSDVAVIPAPSD 461
Query: 481 FWQEIPCAFVSLKTGT-DSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E P AFV +G D+ G+ T +D+ + R ++ Y V + V F++ELP TATGKV
Sbjct: 462 EWGETPKAFVVPNSGDPDNPGV--TAEDLRTFTREQLATYKVVRRVEFVEELPTTATGKV 519
Query: 540 QKYVL 544
QKY L
Sbjct: 520 QKYEL 524
>gi|296824906|ref|XP_002850730.1| luciferin 4-monooxygenase [Arthroderma otae CBS 113480]
gi|238838284|gb|EEQ27946.1| luciferin 4-monooxygenase [Arthroderma otae CBS 113480]
Length = 574
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 187/562 (33%), Positives = 289/562 (51%), Gaps = 33/562 (5%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINPGHV-V 67
N L+P F+ RAA D +I + +TY++ + ++ + G+ V
Sbjct: 28 NRHTLSPTFFLPRAAEIEPDAEAIYHLTANKKIVRKTYQQFADRSRGIAYYIKKHGYKRV 87
Query: 68 SVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLE 127
++APN PA E F + + + IN RL I+ I H++ + VD LL E
Sbjct: 88 GILAPNTPAFLESIFGIAAAAGVNVAINYRLKPEDIAYIFTHADVDSIIVDKEFVPLLDE 147
Query: 128 VVSLFPPHSKTPKLVLITD----DKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
F +K L++ TD + E+S R + E +G + +
Sbjct: 148 ----FYKANKHIPLIIDTDTDADEGELSGEFDAAVR-------EGLEYDREQGGSGWKGL 196
Query: 184 RPKS-DLDPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSV---LLWTLP 238
++ D + ++ L YT GTT+ PKGV ++ ++ A+ ++I+ + Q LW LP
Sbjct: 197 EAQAADEESLIALAYTSGTTARPKGVEYIHRGCYLAALANIIESGLNFQQGRCGYLWILP 256
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK 298
MFH GW+F W V T+ CLRK D P ++ ++++ +TH AP V LL ++ EA+
Sbjct: 257 MFHAMGWTFPWSVTAVRGTHYCLRKVDYPAIWRMLKEENITHFNAAPTVNTLLCAAKEAE 316
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
+L RPVR+ A SPP A + + S+ H YG TE G + P W+ +P +E+
Sbjct: 317 RLPRPVRVTVAASPPTAHLFEQMTSVNLHPVHVYGLTETYGPITKGYYMPSWDTIPIKEK 376
Query: 359 ASLKARQGVRTIGLTEVDIVD---PE-TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEAT 414
ARQG + ++ PE T + V++DG+ GEIV G GY KD AT
Sbjct: 377 YQKMARQGHGFLTSLPARVIKTDVPEGTIIDVRKDGKEIGEIVFTGNICARGYYKDAAAT 436
Query: 415 SKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474
K G ++GD+ + HPDG ++I DR+KD+IISGGENISS +E++L +HP + EA V
Sbjct: 437 DKLFAGGVLHSGDLAVWHPDGAVQILDRAKDIIISGGENISSVALEAMLATHPDILEAGV 496
Query: 475 VGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELP 532
V D W E P A+V+++ G T +II + + + I R+MVP+ V + ELP
Sbjct: 497 VAVSDAHWGERPKAYVTIQAGK-----QVTGSEIIAWAKNSSGISRFMVPREVEIVSELP 551
Query: 533 KTATGKVQKYVLGDIANSMSMS 554
KT+TGK++K VL + A S S
Sbjct: 552 KTSTGKIKKNVLREWAKGASHS 573
>gi|313127059|ref|YP_004037329.1| acyl-CoA synthetase [Halogeometricum borinquense DSM 11551]
gi|448288473|ref|ZP_21479672.1| acyl-CoA synthetase [Halogeometricum borinquense DSM 11551]
gi|312293424|gb|ADQ67884.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Halogeometricum borinquense DSM 11551]
gi|445569624|gb|ELY24196.1| acyl-CoA synthetase [Halogeometricum borinquense DSM 11551]
Length = 537
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 188/548 (34%), Positives = 281/548 (51%), Gaps = 45/548 (8%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ YT+ + R +++L++ GI G V+V+
Sbjct: 4 PLLVTDFLDRARQYYGDKEAVVATTGDRYTYEELGERADGFSAALAAHGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL IL ++ K V+ D+ +
Sbjct: 64 PNTHYHLEAAYGTMQLGAVHTPLNYRLVPADYEYILTDADVKAVYADYEYAE-------- 115
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
K+ I DD + + D++ +++ ++A+ + RP+ D
Sbjct: 116 --------KIEAIRDDVPTETFVTNDTAQVDGDWL-SFDELIAE---STDYDRPEMTEDE 163
Query: 192 MV-LNYTWGTTSAPKGVVQCYK-----AFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGW 245
++ +NYT GTT PKGV + ++ A+ I + + D V LWTLPMFH NGW
Sbjct: 164 LITINYTSGTTGDPKGVCRTHRTETLHAYLITSHQHISD-----DDVYLWTLPMFHVNGW 218
Query: 246 SFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK-----QL 300
+ GA +VC R DA +F +R+ V++MC AP VLN+L + +
Sbjct: 219 GHIYAVTGNGAKHVCTRGVDAEWIFDTVREEHVSYMCAAPTVLNMLMDYYDKQGGVETTG 278
Query: 301 DRPVRILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
D PVR TAG+ PP + E G+ + H YG TE G ++ + ++ + +R
Sbjct: 279 DVPVRAATAGAAPPEATIRTVEDEFGWYLMHVYGATE-TGPLITTSDARRFFDDDSDDRF 337
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK 419
++K +QG+ +G T+V +VD E G V RDGQT GEIV+RG +M Y PEAT +
Sbjct: 338 AVKKQQGIGYLG-TDVRVVD-EDGEDVARDGQTVGEIVVRGNQVMDRYWNKPEATDEAFT 395
Query: 420 D---GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
D G Y+ GD+ ++ +G++ I+DR KD+IISGGENISS E+E L+ H V + AV+
Sbjct: 396 DRLEGYYHMGDLAVVDENGFITIQDRKKDIIISGGENISSIELEDTLFDHDAVGDVAVIP 455
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
P W E P AFV G D+ T D+I Y R RI Y VPK + F+ ELPKTAT
Sbjct: 456 MPSEEWGESPKAFVVPAHG-DADDPGVTADDLIAYTRERIATYKVPKEIEFVTELPKTAT 514
Query: 537 GKVQKYVL 544
GK+QKY L
Sbjct: 515 GKIQKYEL 522
>gi|452208024|ref|YP_007488146.1| acyl-CoA synthetase [Natronomonas moolapensis 8.8.11]
gi|452084124|emb|CCQ37457.1| acyl-CoA synthetase [Natronomonas moolapensis 8.8.11]
Length = 537
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 184/543 (33%), Positives = 278/543 (51%), Gaps = 35/543 (6%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA +++ +T+ + R +L+++L GI G V+V+
Sbjct: 4 PLLTTQFLDRARRDYGSHEAVVATTGERFTYEEVGERADRLSAALQDRGIEKGDSVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + + GAI +N RL + IL +E + V D+ L E V
Sbjct: 64 PNTHYQLEAAYGIMQLGAIHTPLNYRLLPEDLEYILNDAEVRAVIADYE----LAEKVEA 119
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD-LD 190
P V I++D + + + +E ++ DP + P+ D D
Sbjct: 120 V--RDDVPTEVFISNDADATDGE-----------WEDFEAVIDGVDPVYD--EPEMDEAD 164
Query: 191 PMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
+ +NYT GTT PKGV++ ++ I A I + LWTLPMFH NGW +
Sbjct: 165 VITINYTSGTTGDPKGVMRTHRTETIHAYLISIHQDITDDDTYLWTLPMFHVNGWGHIYA 224
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL----DRPVRI 306
+GA VC R DA + I + V+++C AP VLN+L E + D VR+
Sbjct: 225 VTGMGAKQVCTRGIDAEWILETINEEDVSYLCAAPTVLNMLLDYYENHDVSTSGDADVRV 284
Query: 307 LTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
TAGS PP + E G+ + H YG TE G ++ + ++ + + +R ++K Q
Sbjct: 285 ATAGSAPPEATIRTVEDEFGWYLKHVYGATE-TGPLITSSDARRYFEDDSEDRFAVKKTQ 343
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GR 422
G+ +G TEV +VD E G V DGQ+ GEIV+RG +M YL PEAT + D G
Sbjct: 344 GIGYLG-TEVRVVD-EDGNDVAEDGQSIGEIVVRGNQVMDRYLGKPEATEEAFNDRVEGY 401
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
Y+ GD+ + +G ++I+DR KD+IISGGENISS E+E L+ HP V++ A++ P W
Sbjct: 402 YHMGDLATVDENGMVQIQDRKKDIIISGGENISSIELEDTLFEHPEVSDVAIIPAPSDEW 461
Query: 483 QEIPCAFVSLKTGT-DSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
E P AFV +G D+ G+ +E ++ ++ R + Y + + V F+ ELP TATGKVQK
Sbjct: 462 GETPKAFVVPASGDPDAPGV--SEDELTKFTRENLASYKMVRRVEFVAELPTTATGKVQK 519
Query: 542 YVL 544
Y L
Sbjct: 520 YEL 522
>gi|433589711|ref|YP_007279207.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Natrinema
pellirubrum DSM 15624]
gi|448332695|ref|ZP_21521924.1| AMP-dependent synthetase and ligase [Natrinema pellirubrum DSM
15624]
gi|433304491|gb|AGB30303.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Natrinema
pellirubrum DSM 15624]
gi|445625670|gb|ELY79025.1| AMP-dependent synthetase and ligase [Natrinema pellirubrum DSM
15624]
Length = 537
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 179/543 (32%), Positives = 273/543 (50%), Gaps = 35/543 (6%)
Query: 13 PLTPLGFIERAATA-CDDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA T DD + +T+ R + A++L + GI G V+V+
Sbjct: 4 PLLVPEFLDRARTHYSDDEAVVATTGERFTYDDLGERADRFAAALQARGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + +GA+ +N RL IL + ++ D+ + + +
Sbjct: 64 PNTHYHLEAAYGSMQTGAVHTPLNYRLTPDDFKYILSDAGVDAIYADYEYADRIEAI--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P IT+D + ++++ +L P++ RP+ D
Sbjct: 121 ---RDDVPTETFITNDADAVEGD-----------WESFDAVLEDAGPEYD--RPEMSEDE 164
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++ I A + + LWTLPMFH NGW +
Sbjct: 165 IITINYTSGTTGDPKGVCRTHRCETIHAYLLVGHQEITDDDTYLWTLPMFHANGWGHIFA 224
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL-----SSSPEAKQLDRPVR 305
+GAT+VC R DA +F +R V++MCGAP VLN+L PE + VR
Sbjct: 225 VTGIGATHVCTRGVDAAEIFETVRAEDVSYMCGAPTVLNMLIDYYRDHEPETTG-EADVR 283
Query: 306 ILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
+ TAGS PP + E G+ + H YG TE G ++ + + + + +R +K R
Sbjct: 284 LATAGSAPPEATIRTVEDEFGWYLKHVYGATE-TGPLITTSDARRHFQADSDDRFRIKKR 342
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---G 421
QG+ +G TE+ +VD E G V RD +T GE+V+RG +M Y PEAT + D G
Sbjct: 343 QGLAYLG-TEIRVVD-EDGADVPRDDETLGEVVVRGNQIMEKYWNKPEATEEAFTDRVEG 400
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
Y+TGD+ + +G + I+DR KD+IISGGENISS E+E L+ H V +AAV+ P
Sbjct: 401 YYHTGDLATVDENGMIAIQDRKKDIIISGGENISSIELEDTLFDHEAVADAAVIPAPSDE 460
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P AFV G D + +++ ++ R ++ Y + + +++ELP TATGKVQK
Sbjct: 461 WGETPKAFVVPSNG-DPNDPPVSAEELTEFTREQLAGYKAVRRIEYVNELPTTATGKVQK 519
Query: 542 YVL 544
Y L
Sbjct: 520 YEL 522
>gi|435846241|ref|YP_007308491.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Natronococcus
occultus SP4]
gi|433672509|gb|AGB36701.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Natronococcus
occultus SP4]
Length = 534
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 195/540 (36%), Positives = 273/540 (50%), Gaps = 47/540 (8%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
F++RA DD I+ +D T YT+++ R +LA +L+ G+ G V+++APN
Sbjct: 13 FLDRAVDLYDDVTGIVAHDGTEYTYAEVNERVNRLAHALAERGVERGDRVALLAPNTHYF 72
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E +A GA+F +N RL IL + + D+ + + P
Sbjct: 73 IETLYATNKLGAVFVPLNYRLTPDEYEYILGDCAATTLIADYDYAD------KIEPIRDS 126
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVD----TYENMLAKGDPQFSWVRPK-SDLDPM 192
P + AD +D YE++LA P RP S+ D
Sbjct: 127 IPAETFVG---------------YRADEIDGQWEDYEDVLAD-QPTDEPDRPDISEDDDA 170
Query: 193 VLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAA 252
+NYT GTT PKGVV+ ++ A+ + V LWTLPMFH NGW T+
Sbjct: 171 SINYTSGTTGDPKGVVRTHRTEHWHALVLNQHMEIRDDDVYLWTLPMFHCNGWGHTYAIT 230
Query: 253 VVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR----PVRILT 308
G T+VC R FDA V +R++ VT MCGAP VLN L + ++ VRI T
Sbjct: 231 GTGGTHVCQRTFDAEGVLDRVREYDVTFMCGAPTVLNSLIQYHDEHDVETTGECDVRIAT 290
Query: 309 AGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGV 367
AGS P + E + + H YG TE A + A +L R R LK +QG
Sbjct: 291 AGSAPATATIETVEDEFDWRIIHIYGLTETAPI---IATSNSSRRLAQRGR-ELKVKQGA 346
Query: 368 RTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYY 424
T+ T+V +VD E G V RDG+T GEIV+RG +M YL P+AT + + G ++
Sbjct: 347 ETL-CTDVRVVD-EDGEDVPRDGETIGEIVVRGNQVMDRYLNKPDATEQAFSERLEGYFH 404
Query: 425 TGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQE 484
TGD+ + DG + I+DR KD+IISGGENISS E+E VLY HP V +AAV+ P W E
Sbjct: 405 TGDLATIDEDGMVAIQDRKKDIIISGGENISSIELEDVLYDHPDVQKAAVIPVPSEQWGE 464
Query: 485 IPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P A + G D+ TE++I+ + + Y P +V +++LP+TATGKVQKY L
Sbjct: 465 TPKALIV--PGADA---EPTEEEIVDFVTDHLAGYKKPTSVEVVEDLPETATGKVQKYEL 519
>gi|119187611|ref|XP_001244412.1| hypothetical protein CIMG_03853 [Coccidioides immitis RS]
gi|392871131|gb|EAS32999.2| AMP-binding domain-containing protein [Coccidioides immitis RS]
Length = 575
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 187/554 (33%), Positives = 284/554 (51%), Gaps = 27/554 (4%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIY---NDTTY--TWSQTYRRCLQLASSLSSFGINPG 64
N L+P F+ RAA D +I + N+ ++ +T R LA + G
Sbjct: 27 NKHTLSPTSFLPRAAAIEPDAEAIYHVTVNNKVLRRSYIETADRARGLAYYIKKHGYKR- 85
Query: 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V ++ PN PA E + + +GA+ +N RL + I+ I HSE ++ VD L
Sbjct: 86 --VGILCPNTPAFLESIYGIAAAGAVNVAVNYRLKSEDIAYIFTHSEVDIIIVDQEYVHL 143
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
L E P +V+ TD S P + + Y++ L
Sbjct: 144 LDEFRKTRPDFP----VVIDTDTDATEGELSGPFDASVLEGLQ-YDSQLGNHGWNGLETH 198
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVV---PKQSVLLWTLPMFH 241
+ + L YT GTT+ PKGV ++ ++ A+ ++I+ + + LWTLPMFH
Sbjct: 199 AADEESLIALAYTSGTTARPKGVEYIHRGCYLAALANIIESGLNYHQGRCRYLWTLPMFH 258
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD 301
GW+F W V T+ CLRK D ++ L+++ +TH AP V +L +S EA++L
Sbjct: 259 AMGWTFPWAITAVRGTHYCLRKIDYSQIWRLLKEEKITHFNAAPTVNTILCNSKEAERLP 318
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PVR+ A SPP + + SL H YG TE G + P+W+ LPA+++
Sbjct: 319 SPVRVTVAASPPTPHLFEQMLSLNLHPVHVYGMTETYGPITKGYYMPEWDNLPAKDKYQK 378
Query: 362 KARQGVRTIGLTEVDIVDPE----TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
ARQG + V ++ E T + V+R+G+ GEIV G GY KDPEAT K
Sbjct: 379 MARQGHGFVTSLPVRVIKTEVPEGTVIDVERNGKEIGEIVFVGNICARGYYKDPEATKKL 438
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++GD+ + HPDG ++I DR+KD+IISGGENISS +E++L +HP + E +V
Sbjct: 439 FAGGVLHSGDLAVCHPDGAIQILDRAKDIIISGGENISSVALEAMLATHPDILEVGIVAV 498
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPKTA 535
D W E P AF++++ G G +D+I++ + + I R+MVP+ V + ELPKT+
Sbjct: 499 ADSHWGERPKAFITVQPGKTLKG-----EDVIEWAKQTSGISRFMVPREVEVLAELPKTS 553
Query: 536 TGKVQKYVLGDIAN 549
TGKV+K VL + A
Sbjct: 554 TGKVKKNVLREWAK 567
>gi|289581044|ref|YP_003479510.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
gi|448284713|ref|ZP_21475969.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
gi|289530597|gb|ADD04948.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
gi|445569423|gb|ELY23996.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
Length = 541
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 183/546 (33%), Positives = 282/546 (51%), Gaps = 37/546 (6%)
Query: 13 PLTPLGFIERAATACDDCPSII-YNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ YT+++ R + ++ L GI G V+V+
Sbjct: 4 PLLVTDFLDRARRHYSDEEAVVSTTGERYTYAKFGDRADRFSAVLQGRGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GAI +N RL + IL + +++ D+ + + +
Sbjct: 64 PNTHYQLEAAYGTMQLGAIHTPLNYRLTPEDYAYILNDAGVDVIYADYEYAEKIEAI--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
+ P IT+D + + S ++++++LA+ P++ RP+ D
Sbjct: 121 ---REEVPTETFITNDVDAVEAGSD---------WESFDDLLAEATPEYD--RPEMTEDE 166
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++ + A I + V LWTLPMFH NGW +
Sbjct: 167 LITINYTSGTTGDPKGVCRTHRNETLHAYLISIHQEIRDDDVYLWTLPMFHVNGWGHIYA 226
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRP------- 303
+GAT+VC R DA ++ I++ V+++CGAP VLNLL E D P
Sbjct: 227 ITGMGATHVCTRGVDAESIIETIQEEDVSYLCGAPTVLNLLIDYYE-DAADEPEMRGGTD 285
Query: 304 VRILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
VRI TAGS PP + E + + H YG TE + + + ++ + ER ++K
Sbjct: 286 VRIATAGSSPPEATIRTVEDEFDWRLKHVYGATETGPLITTSDARRHFDA-DSDERFAIK 344
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD-- 420
RQG+ +G TEV +VD E G V RD T GE+V+RG +M Y P+AT + D
Sbjct: 345 KRQGLGFLG-TEVRVVD-EDGADVPRDSTTIGEVVVRGNQVMERYWNKPDATEEAFSDRI 402
Query: 421 -GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
G ++TGD+G + +G + I+DR KD+IISGGENISS E+E L+ HP V++ AV+ P
Sbjct: 403 EGYFHTGDLGTVDENGLVAIQDRKKDIIISGGENISSIELEDTLFDHPGVSDVAVIPAPS 462
Query: 480 PFWQEIPCAFVSLKTGT-DSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
W E P AFV +G + G+ T E ++++ R + Y + F+ +LP TATGK
Sbjct: 463 EQWGETPKAFVVPNSGDPNEPGVSTDE--LVEFTRENLAGYKTVHRIEFVKQLPTTATGK 520
Query: 539 VQKYVL 544
VQKY L
Sbjct: 521 VQKYEL 526
>gi|303316910|ref|XP_003068457.1| AMP-binding enzyme, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240108138|gb|EER26312.1| AMP-binding enzyme, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 575
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 187/554 (33%), Positives = 284/554 (51%), Gaps = 27/554 (4%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIY---NDTTY--TWSQTYRRCLQLASSLSSFGINPG 64
N L+P F+ RAA D +I + N+ ++ +T R LA + G
Sbjct: 27 NKHTLSPTFFLPRAAAIEPDAEAIYHVTVNNKVLRRSYIETADRARGLAYYIKKHGYKR- 85
Query: 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V ++ PN PA E + + +GA+ +N RL + I+ I HSE ++ VD L
Sbjct: 86 --VGILCPNTPAFLESIYGIAAAGAVNVAVNYRLKSEDIAYIFTHSEVDIIIVDQEYVHL 143
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
L E P +V+ TD S P + + Y++ L
Sbjct: 144 LDEFRKTRPDFP----VVIDTDTDATEGELSGPFDASVLEGLQ-YDSQLGNHGWNGLETH 198
Query: 185 PKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVV---PKQSVLLWTLPMFH 241
+ + L YT GTT+ PKGV ++ ++ A+ ++I+ + + LWTLPMFH
Sbjct: 199 AADEESLIALAYTSGTTARPKGVEYIHRGCYLAALANIIESGLNYHQGRCRYLWTLPMFH 258
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD 301
GW+F W V T+ CLRK D ++ L+++ +TH AP V +L +S EA++L
Sbjct: 259 AMGWTFPWAITAVRGTHYCLRKIDYSQIWRLLKEEKITHFNAAPTVNTILCNSKEAERLP 318
Query: 302 RPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
PVR+ A SPP + + SL H YG TE G + P+W+ LPA+++
Sbjct: 319 SPVRVTVAASPPTPHLFEQMLSLNLHPVHVYGMTETYGPITKGYYMPEWDNLPAKDKYQK 378
Query: 362 KARQGVRTIGLTEVDIVDPE----TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
ARQG + V ++ E T + V+R+G+ GEIV G GY KDPEAT K
Sbjct: 379 MARQGHGFVTSLPVRVIKTEVPEGTVIDVERNGKEIGEIVFVGNICARGYYKDPEATKKL 438
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++GD+ + HPDG ++I DR+KD+IISGGENISS +E++L +HP + E +V
Sbjct: 439 FAGGVLHSGDLAVCHPDGAIQILDRAKDIIISGGENISSVALEAMLATHPDILEVGIVAV 498
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPKTA 535
D W E P AF++++ G G +D+I++ + + I R+MVP+ V + ELPKT+
Sbjct: 499 ADSHWGERPKAFITVQPGKTLKG-----EDVIEWAKQTSGISRFMVPREVEVLAELPKTS 553
Query: 536 TGKVQKYVLGDIAN 549
TGKV+K VL + A
Sbjct: 554 TGKVKKNVLREWAK 567
>gi|448318801|ref|ZP_21508313.1| AMP-dependent synthetase and ligase [Natronococcus jeotgali DSM
18795]
gi|445597982|gb|ELY52052.1| AMP-dependent synthetase and ligase [Natronococcus jeotgali DSM
18795]
Length = 540
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 183/544 (33%), Positives = 271/544 (49%), Gaps = 30/544 (5%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
PL F++RA D +++ YT+ + R +L++ L GI G V+V
Sbjct: 2 EVPLLVTDFLDRARKYYGDEEAVVATTGERYTYDEFGDRADRLSAVLQERGIEKGDRVAV 61
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+ PN E + + GAI +N RL +L + V D+ + + V
Sbjct: 62 LDPNTHYHLEAAYGIMQLGAIHTPLNYRLTPEDYEYMLSDAGVDAVVADYEYARKIDAVR 121
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SD 188
P + + TD + + +E+++A+ DP + RP+ S+
Sbjct: 122 DEVPTET-----FIATDADALEDCEGE---------WEDFEDLIAETDPDYD--RPEMSE 165
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + +NYT GTT PKGV++ ++ + A I + V LWTLPMFH NGW
Sbjct: 166 DDVITINYTSGTTGDPKGVMRTHRTESLHAQLVTIHHEIRDDDVYLWTLPMFHVNGWGHI 225
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL----DRPV 304
+ +GA +VC R DA IR+ V+ +C AP VL L E + D +
Sbjct: 226 YAITGMGAKHVCTRGVDAEANLRQIREEDVSFLCCAPTVLTLFEEYLEETDVPTTGDASI 285
Query: 305 RILTAGSPPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
R+ AG+ PP ++ E G+ YG TE G + + + + ER +LK
Sbjct: 286 RVTAAGAAPPESIIETVEEEFGWYFRQLYGATE-TGPLIGTSATRRLIDEDSEERFALKK 344
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR- 422
RQG+ +G TEV++VD + G V D +T GEI++RG +M GY + PE T + D R
Sbjct: 345 RQGIAPLG-TEVEVVD-DDGNEVPWDDETIGEILVRGNQVMEGYWEKPEETEEAFDDKRE 402
Query: 423 --YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
++TGD+ +++ DG + I+DR KD+I+SGGENISS E+E L+ HP V + A++ P
Sbjct: 403 GWFHTGDLAVVNEDGLMAIQDRKKDIIVSGGENISSIELEDALFDHPDVADVAIIPAPSE 462
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E P AFV G D TE D+ Y R R+ Y V V F+DELPKTATGK+Q
Sbjct: 463 KWGETPKAFVVPANG-DPENPPVTEDDLTAYTRERLAGYKVVHRVEFVDELPKTATGKIQ 521
Query: 541 KYVL 544
KY L
Sbjct: 522 KYEL 525
>gi|448308210|ref|ZP_21498089.1| AMP-dependent synthetase and ligase [Natronorubrum bangense JCM
10635]
gi|445594320|gb|ELY48482.1| AMP-dependent synthetase and ligase [Natronorubrum bangense JCM
10635]
Length = 537
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 180/545 (33%), Positives = 278/545 (51%), Gaps = 43/545 (7%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA T D +++ +T+++ R + +++L GI G V+V+
Sbjct: 4 PLLVPEFLDRARTHYGDSEAVVATTGERFTYNELGERADRFSAALQERGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL + IL+ + +V+ DH + +
Sbjct: 64 PNTHYHLEAAYGSMQIGAVHTPLNYRLTPDDFAYILEDAGVDVVYADHAYAE------KI 117
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD----TYENMLAKGDPQFSWVRPKS 187
P + P IT+D AD VD ++ +L ++ RP+
Sbjct: 118 EPIREEVPTETFITND---------------ADAVDGEWEAFDAVLEDAGTEYD--RPEM 160
Query: 188 DLDPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWS 246
D + ++ +NYT GTT PKGV + ++ I A + + V LWTLPMFH NGW
Sbjct: 161 DEEEIITINYTSGTTGDPKGVCRTHRGETIHAYLTTTHQGISDDDVYLWTLPMFHVNGWG 220
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLD----R 302
+ +GA +VC R DA +F +R+ V++MC AP VLN+L ++
Sbjct: 221 HIYAITGMGAKHVCTRGIDAEWIFETVREENVSYMCAAPTVLNMLIDYYGDNDIETSGAN 280
Query: 303 PVRILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
VRI TAGS PP + E G+ + H YG TE G ++ + + + + +R ++
Sbjct: 281 DVRIATAGSAPPEATIRTIEDEFGWYLKHVYGATE-TGPLIATSDAGRHFEADSDDRFAV 339
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD- 420
K RQG+ +G TE+ +VD E G V +D ++ GE+V++G +M Y PE T + D
Sbjct: 340 KKRQGLGFLG-TEIRVVD-EDGEDVSQDDKSIGEVVVKGNQVMEKYWNKPEETEEAFSDR 397
Query: 421 --GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
G Y+TGD+ + G + I+DR KD+IISGGENISS E+E L+ HP V++ AV+ P
Sbjct: 398 IEGYYHTGDLATVDEHGMIAIQDRKKDIIISGGENISSIELEDTLFDHPEVSDVAVIPSP 457
Query: 479 DPFWQEIPCAFVSLKTGT-DSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
W E P AFV +G D G+ +E D++ + R + Y + F++ELP TATG
Sbjct: 458 SEKWGETPKAFVVPTSGDPDEPGI--SEDDLVAFTRENLASYKTVDRIEFVEELPTTATG 515
Query: 538 KVQKY 542
KVQKY
Sbjct: 516 KVQKY 520
>gi|452988357|gb|EME88112.1| hypothetical protein MYCFIDRAFT_75948 [Pseudocercospora fijiensis
CIRAD86]
Length = 566
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 189/560 (33%), Positives = 279/560 (49%), Gaps = 39/560 (6%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTT-----YTWSQTYRRCLQLASSLSSFGINPGHVVS 68
L+P F+ RAA+ + + ++ ++ T R LA L G V
Sbjct: 15 LSPTFFLPRAASIEPNAVACVHRTANGKMLRRSYQTTADRARGLAYYLKKHGFKR---VG 71
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
++ N PA E + + + A+ IN RL I+ I H++ ++ VD LL +
Sbjct: 72 ILCTNTPAFLESIYGIGAASAVNVAINYRLKKDDITYIFDHADVDMIIVDAEFRQLLDD- 130
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSD 188
H+ P L++ TD E + P + + + G P D
Sbjct: 131 --FNQKHTNVP-LIVDTDTDE----DTGPYDQAVLEGLQHDDRTGGHGWAGLETQVPNED 183
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLID------WVVPKQSVLLWTLPMFHN 242
+ L+YT GTT+ PKGV +++ ++ A+ ++I+ + K+ LWTLPMFH
Sbjct: 184 -SMLALSYTSGTTARPKGVEYTHRSAYLAALGNVIESGLNTSHGLAKRCHYLWTLPMFHA 242
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
GW+F W V T+ CLRK D P ++ L+++ ++H AP V LL + P A++L
Sbjct: 243 MGWTFPWAVTAVRGTHYCLRKIDYPYIWKLLKEEQISHFNAAPTVNTLLLADPNAEKLQY 302
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
PVR+ A SPP A + R E H YG TE G P+W+ L ++E+
Sbjct: 303 PVRVTVAASPPTAHLFQRMEEHNLRPVHVYGMTETYGPITKGYQLPEWDDLESKEKYGKM 362
Query: 363 ARQGVRTIGLTEVDIV---DPETGL--------SVKRDGQTRGEIVMRGGSLMLGYLKDP 411
ARQG I V ++ E+G V +DG+ GEIV G GY KD
Sbjct: 363 ARQGHGFITSLPVRVIKTNQDESGKWDANEVIEDVAKDGKEIGEIVFIGNICAKGYYKDV 422
Query: 412 EATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNE 471
AT K G ++GD+ + H DG ++I DR+KD+IISGGENISS +ES+L +HP V E
Sbjct: 423 AATKKLFAGGVLHSGDLAVWHADGAIQILDRAKDIIISGGENISSVALESMLVTHPDVLE 482
Query: 472 AAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFID 529
AA V D W E P AF+++K G + DI+Q+ + +RI R+MVPK + ID
Sbjct: 483 AACVAVQDKQWGERPKAFLTVKEGKKGS---ISGDDIMQWAKKQSRISRFMVPKEIEIID 539
Query: 530 ELPKTATGKVQKYVLGDIAN 549
ELPKT+TGKV+K +L D A
Sbjct: 540 ELPKTSTGKVRKNILRDWAQ 559
>gi|448419937|ref|ZP_21580747.1| acyl-CoA synthetase [Halosarcina pallida JCM 14848]
gi|445674105|gb|ELZ26650.1| acyl-CoA synthetase [Halosarcina pallida JCM 14848]
Length = 537
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 181/543 (33%), Positives = 281/543 (51%), Gaps = 35/543 (6%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ YT+ + R +++L++ G+ G V+V+
Sbjct: 4 PLLVTDFLDRARRHYGDREAVVATTGERYTYEELGERADGYSAALAARGVVKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL IL + K V+ DH + + V
Sbjct: 64 PNTHYHLEAAYGAMQLGAVHTPLNYRLVPADYEYILNDAGVKAVYADHAYAGKIEAV--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SDLD 190
P IT+D P +++ +++ ++A+ + RP+ ++ D
Sbjct: 121 ---REDVPTETFITND----------PEKVEGEWL-SFDELVAE---STEYDRPEMAEED 163
Query: 191 PMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
+ +NYT GTT PKGV + ++ + A + + V LWTLPMFH NGW +
Sbjct: 164 LITINYTSGTTGDPKGVCRTHRTETLHAYLVSVHQNISDDDVYLWTLPMFHVNGWGHLYA 223
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ-----LDRPVR 305
GA +VC R DA +F I + V+++C AP VLN+L + + + PVR
Sbjct: 224 VTGAGAKHVCTRGVDAEWIFDAIGEEDVSYLCAAPTVLNMLMDYYDRQDGVETAGEAPVR 283
Query: 306 ILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
TAG+ PP + E G+ + H YG TE G ++ + ++ + + +R ++K +
Sbjct: 284 AATAGAAPPEATIRTVEDEFGWYLMHVYGATE-TGPLITTSDARRFFEDDSDDRFAVKKQ 342
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---G 421
QG+ +G T+V +VD E G V DGQT GEIV+RG +M Y PE T + D G
Sbjct: 343 QGIGYLG-TDVRVVD-EDGEDVTPDGQTVGEIVVRGNQVMDRYWNKPEETEEAFTDRLEG 400
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
Y+ GD+ ++ +G++ I+DR KD+IISGGENISS E+E L+ H V + AV+ P
Sbjct: 401 YYHMGDLAVVDENGFVTIQDRKKDIIISGGENISSIELEDTLFDHEAVGDVAVIPMPSEE 460
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P AFV +G D+ T +++I++ R RI Y VPK + F+ ELPKTATGK+QK
Sbjct: 461 WGESPKAFVVPASG-DAANPGVTAEELIEFTRERIATYKVPKEIAFVAELPKTATGKIQK 519
Query: 542 YVL 544
Y L
Sbjct: 520 YEL 522
>gi|115389402|ref|XP_001212206.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114194602|gb|EAU36302.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 580
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 187/525 (35%), Positives = 276/525 (52%), Gaps = 26/525 (4%)
Query: 41 TWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDA 100
++ +T R LA L G V ++ PN PA E F + +GA+ +N RL
Sbjct: 71 SYIETADRARGLAYYLKKHGFTR---VGILCPNTPAFLESIFGIAAAGAVNVAVNYRLKE 127
Query: 101 RTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRI 160
IS I +HS+ +++ VD L+ + SK ++I D + + P
Sbjct: 128 DDISYIFQHSDVEVIIVDKEFEPLIQAYRA-----SKPNIPIIIDTDTDATEGELSGPF- 181
Query: 161 PPADFVDTYENMLAKGDPQFSWVRPK--SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIA 218
++ + L G + + + S+ D + L YT GTT+ PKGV ++ ++ A
Sbjct: 182 -DGAVLEGLRHDLETGAKGWEGLESQAASEDDILALAYTSGTTARPKGVEYTHRGCYLAA 240
Query: 219 VDSLIDWVVP---KQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRK 275
+ ++I+ + + LWTLPMFH GW+F W V T+ CLRK D P ++ L+++
Sbjct: 241 MGNVIESGLNPLRGRCRYLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKIDYPEIWRLLKQ 300
Query: 276 HGVTHMCGAPIVLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKT 335
VTH AP V LL ++ EA++L PV++ A SPP + + +L H YG T
Sbjct: 301 EHVTHFNAAPTVNTLLCNADEAERLPNPVQVTVAASPPTPHLFEQMTNLNLHPVHTYGMT 360
Query: 336 EIAGVNVSCAWKPKWNKLPARERASLKARQGVRTIGLTEVDIVD---PE-TGLSVKRDGQ 391
E G P W++LP +E+ ARQG + V +V PE T + V RDGQ
Sbjct: 361 ETYGPITKGYIMPSWDQLPLKEKYQKMARQGHGFVTSLPVRVVKTDVPEGTVVDVSRDGQ 420
Query: 392 TRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGG 451
GEIV G GY KDPEAT K G ++GD+ + H DG ++I DR+KD+IISGG
Sbjct: 421 EIGEIVFVGNICARGYYKDPEATRKLFAGGVLHSGDLAVWHSDGAIQILDRAKDIIISGG 480
Query: 452 ENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQY 511
ENISS +ES+L +HP + EA VV PD W E P A+V++K GG K +I++
Sbjct: 481 ENISSVALESMLVTHPDILEAGVVAVPDSHWGERPKAYVTVK-----GGKTLEGKAVIEW 535
Query: 512 CRAR--IPRYMVPKTVVFIDELPKTATGKVQKYVLGDIANSMSMS 554
R+ I ++MVP+ V + ELPKT+TGKV+K VL + A S +
Sbjct: 536 ARSTSGISKFMVPREVEVVPELPKTSTGKVRKNVLREWAKGGSRT 580
>gi|402086821|gb|EJT81719.1| AMP-binding domain-containing protein [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 648
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 199/607 (32%), Positives = 290/607 (47%), Gaps = 83/607 (13%)
Query: 13 PLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINPGHV-VSVI 70
PL+P F+ERAA+ D ++++ T ++Y A L+ + + G+ V ++
Sbjct: 49 PLSPTFFLERAASIEPDAEAVVHVTANGKTLRRSYAELADRARGLAYYLLAGGYRRVGIV 108
Query: 71 APNIPAMYELHFAV-PMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
APN PA E F V + GA+ +N RL +S IL ++ V VD + ++++
Sbjct: 109 APNTPAFLETIFGVGAVPGAVLVPVNYRLKPEDVSYILGFADVDCVVVD----AEFVDLL 164
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDP----QFSWV-- 183
S F + ++ TD S P E +LA D + W
Sbjct: 165 SHFRSEHPGVRFIVDTDTDATEGELSGP----------FDEAVLAGLDADKKGRRGWAGL 214
Query: 184 --RPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLID---------------WV 226
P + D + + +T GTTS PKGVV ++ ++ A+ ++++
Sbjct: 215 APHPADEDDAIAIPFTSGTTSRPKGVVYTHRGAYLAALANVVESGLNIGEADGGGGGGGG 274
Query: 227 VPKQSVLLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPI 286
+ LWTLPMFH GW+F W T+VCLR+ D ++ L+R+ VTH AP
Sbjct: 275 GRHRCRYLWTLPMFHAVGWTFPWAVTAARGTHVCLRRVDYAAIWRLLREERVTHFSAAPT 334
Query: 287 VLNLLSSSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAW 346
V LL ++PEA L+ PVR+ A SPP A + + L H YG TE G
Sbjct: 335 VCTLLCAAPEAGALEAPVRVTVAASPPTAHLFAQMTDLNLRPVHVYGMTETYGPITKGYH 394
Query: 347 KPKWNKLPARERASLKARQG-----------VRTIGLTEVDIVDPETGLS---------- 385
P W+ LP E+ +L ARQG VRT E + +
Sbjct: 395 MPAWDALPPAEKYALMARQGHGFLTSLPIRVVRTPAEEEQALHQSHHDATYQQQQQRQQQ 454
Query: 386 ---------------VKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGRYYTGDVGM 430
VK+DG+ GEIV G GY KDPEAT+K G ++GD+ +
Sbjct: 455 QPPSDDDDDDEVLVDVKKDGKEIGEIVFVGNICAKGYYKDPEATAKLFAGGALHSGDLAV 514
Query: 431 MHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPCAFV 490
HPDG +I DR+KD+IISGGENISS +ES+L HP V EA VV PD W E P A+V
Sbjct: 515 WHPDGSAQILDRAKDIIISGGENISSVALESMLVQHPDVLEAGVVAVPDSRWGERPKAYV 574
Query: 491 SLKTGTDSGGMMTTE-----KDIIQYCRAR--IPRYMVPKTVVFIDELPKTATGKVQKYV 543
+ + GG +D+I++ R + I ++MVP+ V +DELPKT+TGK++K V
Sbjct: 575 TTRQRRGGGGDGNPAPALRGEDLIEWARDQSAISKFMVPREVDVVDELPKTSTGKIRKNV 634
Query: 544 LGDIANS 550
L + A
Sbjct: 635 LREWARQ 641
>gi|448738456|ref|ZP_21720480.1| AMP-dependent synthetase and ligase [Halococcus thailandensis JCM
13552]
gi|445801584|gb|EMA51913.1| AMP-dependent synthetase and ligase [Halococcus thailandensis JCM
13552]
Length = 532
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 194/537 (36%), Positives = 270/537 (50%), Gaps = 40/537 (7%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
F++RA D +I +D T YT+ + R Q++ +L G+ G V++++PN
Sbjct: 10 FLDRAVDLYSDVVGVIAHDGTEYTYGEFAERVNQVSHALREMGVEQGDRVALLSPNTHYF 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E + V GA+F +N L IL + +V DH + + V P S
Sbjct: 70 LETLYGVNQLGAVFVPMNYLLVPDDFEYILNDCGADVVIADHEYAENVEAVRDSVPAESF 129
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SDLDPMVLNY 196
D D+VD YE LA P RP+ ++ D +NY
Sbjct: 130 VGYEADAID----------------GDWVD-YEEWLA-AQPSERPDRPEIAEDDDASINY 171
Query: 197 TWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGA 256
T GTT PKGVV+ ++ A+ + LWTLPMFH NGW T+ GA
Sbjct: 172 TSGTTGDPKGVVRTHRTEHWHALVLNHHKEIRDDDTYLWTLPMFHCNGWGHTYAITGTGA 231
Query: 257 TNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL----SSSPEAKQL-DRPVRILTAGS 311
T+VC R F+ +R++ V+++CGAP VLN L +PE DR VRI TAGS
Sbjct: 232 THVCQRTFEPEGTLERVREYDVSYLCGAPTVLNRLIAHYDENPEVVTTGDRDVRIATAGS 291
Query: 312 PPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTI 370
P L E +G+ + H YG TE A + ++ + P+ +L R LK +QG +
Sbjct: 292 APATATLSSIEDDIGWRIIHLYGLTETAPL-ITSSNSPR--RLAEHGR-DLKVKQGSEVL 347
Query: 371 GLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYYTGD 427
T+V +VD + G V RDG T GEIV++G +M YL PEAT + G ++TGD
Sbjct: 348 A-TDVRVVDDD-GNDVPRDGATLGEIVVKGNQVMDRYLNKPEATEEAFTAKLPGYFHTGD 405
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+ M DG + I+DR KD+IISGGEN+SS +E VLY HP + +AAV+ P W E
Sbjct: 406 LATMDEDGMVAIQDREKDIIISGGENVSSIAVEDVLYDHPDIAKAAVIPTPSDEWGEAVT 465
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
A V K D G E + + RY +PKTV F+D+LP+TATGKVQKY L
Sbjct: 466 ALVVEKPDADLTGEAVRE-----FAGEHLARYKIPKTVEFVDDLPETATGKVQKYEL 517
>gi|448398889|ref|ZP_21570244.1| AMP-dependent synthetase and ligase [Haloterrigena limicola JCM
13563]
gi|445670362|gb|ELZ22964.1| AMP-dependent synthetase and ligase [Haloterrigena limicola JCM
13563]
Length = 537
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/544 (33%), Positives = 276/544 (50%), Gaps = 37/544 (6%)
Query: 13 PLTPLGFIERAATAC-DDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA T DD + +T+ + R + +++L + GI G V+V+
Sbjct: 4 PLLVPEFLDRARTHYGDDEAVVATTGERFTYDELGERADRFSAALQARGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + + +GAI +N RL + IL + ++ D+ + + +
Sbjct: 64 PNTHYHLEAAYGIMQTGAIHTPLNYRLTPDDFAYILTDAGVDAIYADYDFAEKIEAI--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
+ IT+D + + +E++L + + RP+ D
Sbjct: 121 ---RDEVTTETFITNDADAVEGE-----------WEAFEDVLEEAGTDYD--RPEMAEDE 164
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++ I A ++ + V LWTLPMFH NGW +
Sbjct: 165 IITINYTSGTTGDPKGVCRTHRCETIHAYLTVGHQNLSDDDVYLWTLPMFHANGWGHIFA 224
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ----LDRPVRI 306
+GA ++C R DA +F +R V++MCGAP VLN+L E + D VR+
Sbjct: 225 VTGIGAKHICTRGIDAGEIFETVRSEDVSYMCGAPTVLNMLIEYYEQNEPETTGDADVRL 284
Query: 307 LTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
TAGS PP + E G+ + H YG TE G ++ + + + + +R +K RQ
Sbjct: 285 ATAGSAPPEATIRTVEDEFGWYMKHVYGATE-TGPLITTSDARRHFEDDSDDRFRIKKRQ 343
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GR 422
G+ +G TE+ +VD E G V RD +T GE+V+RG +M Y PE T + D G
Sbjct: 344 GLAYLG-TEIRVVD-EDGNDVPRDDETLGEVVVRGNQIMEKYWGKPEVTEEAFSDRIEGY 401
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
Y+ GD+ + +G L I+DR KD+IISGGENISS E+E L+ HP V++ AV+ P W
Sbjct: 402 YHMGDLATIDENGMLSIQDRKKDIIISGGENISSIELEDTLFDHPEVSDVAVIPAPSDEW 461
Query: 483 QEIPCAFVSLKTG--TDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
E P AFV +G TD G TE ++ ++ R + Y + + F+ +LP TATGKVQ
Sbjct: 462 GETPKAFVVPASGDPTDPG---VTESELEEFTRENLAGYKTVRRIEFVKQLPTTATGKVQ 518
Query: 541 KYVL 544
KY L
Sbjct: 519 KYEL 522
>gi|448582034|ref|ZP_21645538.1| acyl-CoA synthetase [Haloferax gibbonsii ATCC 33959]
gi|445731682|gb|ELZ83265.1| acyl-CoA synthetase [Haloferax gibbonsii ATCC 33959]
Length = 540
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 185/543 (34%), Positives = 284/543 (52%), Gaps = 32/543 (5%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ +T+ + R +++L S G+ G V+V+
Sbjct: 4 PLLVTEFLDRARRYYGDEEAVVATTGERFTYDELGERADGFSAALQSRGVEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL +L ++ V+ D+ + + EV
Sbjct: 64 PNTHYHLEAAYGSMQLGAVHMPLNYRLVPADFEYMLNDADVTAVYADYAFAEKIDEV--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
+ P + +T+D E ++ S+ ++++D ++ ++A+ + RP+ D D
Sbjct: 121 ---RDEIPTEIFVTNDPEKAAESTD------SEWLD-FDELVAE---STDYERPEMDEDD 167
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
+V +NYT GTT PKGV + ++A I A + + V LWTLPMFH NGW +
Sbjct: 168 IVTINYTSGTTGDPKGVCRTHRAETIHAYLVSMHQDIADDDVYLWTLPMFHVNGWGHIYA 227
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAKQLD----RPVR 305
GA +VC R DA TV IR V+++C AP VLN L+ E ++ PVR
Sbjct: 228 ITGHGAKHVCTRGVDAETVLDAIRDEDVSYLCAAPTVLNILMKHYREEGGVETTGASPVR 287
Query: 306 ILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
TAG+ PP + E G+ + H YG TE G ++ + ++ +R +K +
Sbjct: 288 AATAGAAPPEATIRTVEDEFGWRLMHVYGATE-TGPLITTSEAGRYLG-DGDDRFGVKKK 345
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK---DG 421
QG+ +G T+V +VD E G V RD Q+ GEIV+ G +M Y PE T + +G
Sbjct: 346 QGIGYLG-TDVRVVD-EDGNDVPRDDQSIGEIVVAGNQVMEKYWNKPEETEEAFSARLEG 403
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
Y+ GD+ ++ +G++ I+DR KD+IISGGENISS E+E L+ H V + AV+ P
Sbjct: 404 YYHMGDLAVVDENGFISIQDRKKDIIISGGENISSIELEDTLFDHDEVADVAVIPVPSDE 463
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P AFV +G +T E +I++CR RI Y VPK + F+ ELPKTATGK+QK
Sbjct: 464 WGESPKAFVVPTSGDPDAPGVTAEA-LIEFCRERIATYKVPKEIEFVAELPKTATGKIQK 522
Query: 542 YVL 544
Y L
Sbjct: 523 YEL 525
>gi|448368405|ref|ZP_21555357.1| AMP-dependent synthetase and ligase [Natrialba aegyptia DSM 13077]
gi|445652235|gb|ELZ05135.1| AMP-dependent synthetase and ligase [Natrialba aegyptia DSM 13077]
Length = 560
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 182/554 (32%), Positives = 281/554 (50%), Gaps = 34/554 (6%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ +T+++ R + AS L G+ G V+V+
Sbjct: 4 PLLVTDFLDRARRHYGDEEAVVATTGERFTYAELGSRADRFASMLQDRGVEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL + IL+ + +++ D+ + + +
Sbjct: 64 PNTHYQLEAAYGTMQLGAVHTPLNYRLTPEDYAYILEDAGVDVIYADYEFADKVEAI--- 120
Query: 132 FPPHSKTPKLVLITDDKEI------SSSSSPPPRIPPADFVD----TYENMLAKGDPQFS 181
+ P IT+D + + +S P +D D +++++LA ++
Sbjct: 121 ---REEVPTETFITNDVDAIGAEAGDTGASEPDGSNGSDVTDEVWESFDDLLADATAEYD 177
Query: 182 WVRPKSDLDPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMF 240
RP D D ++ +NYT GTT PKGV + ++ + A I + + LWTLPMF
Sbjct: 178 --RPTMDEDDIITINYTSGTTGDPKGVCRTHRTETLHAYLISIHQDITDEDTYLWTLPMF 235
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL------SSS 294
H NGW + +GA +VC R DA + IR+ V+++CGAP VLN+L +SS
Sbjct: 236 HVNGWGHIYAVTGMGAKHVCTRGVDAEWILETIREEDVSYLCGAPTVLNMLIDHYEDASS 295
Query: 295 PEAKQLDRPVRILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKL 353
P VRI TAGS PP + E G+ + H YG TE + + + ++
Sbjct: 296 PPETSGASDVRIATAGSAPPEATIRTVEDEFGWQLKHVYGATETGPLITTSDARRHFDA- 354
Query: 354 PARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEA 413
+ +R ++K RQG+ +G TEV +VD E G V RD T GE+V+RG +M Y PE
Sbjct: 355 DSDDRFAIKKRQGLGFLG-TEVRVVD-EDGNDVPRDKTTIGEVVVRGNQVMEEYWNKPEV 412
Query: 414 TSKCMK---DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVN 470
T++ DG ++TGD+ + G + I+DR KD+IISGGENISS E+E L+ HP V
Sbjct: 413 TAEAFSERLDGYFHTGDLATVDERGMIAIQDRKKDIIISGGENISSIELEDTLFDHPQVA 472
Query: 471 EAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDE 530
+ AV+ P W E P AFV +G D + ++I++ R + Y + V F+ +
Sbjct: 473 DVAVIPSPSEQWGETPKAFVVPSSG-DVNDPGVSADELIEFTRENLAGYKAVQRVEFVTQ 531
Query: 531 LPKTATGKVQKYVL 544
LP TATGKVQKY L
Sbjct: 532 LPTTATGKVQKYEL 545
>gi|396493939|ref|XP_003844192.1| similar to acyl CoA synthetase [Leptosphaeria maculans JN3]
gi|312220772|emb|CBY00713.1| similar to acyl CoA synthetase [Leptosphaeria maculans JN3]
Length = 589
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 183/552 (33%), Positives = 290/552 (52%), Gaps = 30/552 (5%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIYNDTT------YTWSQTYRRCLQLASSLSSFGINP 63
N L+P F+ RAA + + IY+ T ++++ R LA L G
Sbjct: 40 NFHTLSPTCFLWRAAQ-IEPNATAIYHKTANNQILRRSYAEAADRARGLAYYLRKHGYKR 98
Query: 64 GHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSS 123
+ ++A N PA E F + +GA+ +N RL I+ I +H++ ++ D
Sbjct: 99 ---IGILATNTPAFLESLFGIAAAGAVNVAVNYRLKHDDINYIFQHADVDMIIADAEFEG 155
Query: 124 LLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWV 183
LL + P P +LI D +++ P ++ + + KG ++ +
Sbjct: 156 LLADFKRDKP---NVP--ILIDTDTDVTEGELSGPFDDAV--LEGLKYDIEKGGKGWTEL 208
Query: 184 RPKSDLDPMV--LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVV---PKQSVLLWTLP 238
++ + V L YT GTT+ PKGV ++ ++ A+ ++I+ + ++ LWTLP
Sbjct: 209 ESQAPDEEAVFALAYTSGTTARPKGVELTHRGVYLAAMANVIESGLNYHEGRAKYLWTLP 268
Query: 239 MFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAK 298
MFH GW+F W +V T+ CLRK D P ++ L+++ G+TH AP V LL ++ EA+
Sbjct: 269 MFHATGWTFPWSVTMVRGTHYCLRKIDYPEIWRLLKEEGITHFNAAPTVNTLLCAAKEAE 328
Query: 299 QLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARER 358
+L +PVR+ A SPP A + + +L H YG TE G P+W+ +P +E+
Sbjct: 329 RLPQPVRVTVAASPPSAFLFEQMSNLNLHPVHVYGLTETYGPTTKGYHMPEWDTIPEKEK 388
Query: 359 ASLKARQGVRTIGLTEVDIVDPETG----LSVKRDGQTRGEIVMRGGSLMLGYLKDPEAT 414
ARQG I V ++ E + V +DG+ GE++ G GY KD EAT
Sbjct: 389 YERMARQGHGFITGLPVRVIKTEQPEGVLIDVAKDGKEIGEVIFEGNICAKGYYKDAEAT 448
Query: 415 SKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAV 474
K G ++GD+ + HPD ++I DR+KD+IISGGENISS +E++L +HP + E V
Sbjct: 449 RKLWAGGVLHSGDLAVWHPDNSIKILDRAKDIIISGGENISSVALEAMLSTHPAILEVGV 508
Query: 475 VGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELP 532
PD W E P A+V++K G S + K++IQ+ + + I R+MVP+ VV + ELP
Sbjct: 509 CAVPDSHWGERPKAYVTVKDGYASNEEIG--KEVIQWAKENSSISRFMVPREVVVVKELP 566
Query: 533 KTATGKVQKYVL 544
KT+TGK++K VL
Sbjct: 567 KTSTGKIKKNVL 578
>gi|448328819|ref|ZP_21518125.1| AMP-dependent synthetase and ligase [Natrinema versiforme JCM
10478]
gi|445615123|gb|ELY68782.1| AMP-dependent synthetase and ligase [Natrinema versiforme JCM
10478]
Length = 553
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 184/553 (33%), Positives = 277/553 (50%), Gaps = 39/553 (7%)
Query: 13 PLTPLGFIERAATAC-DDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA T DD + +T+ + R + A++L GI G V+V+
Sbjct: 4 PLLVPEFLDRARTHYGDDEAVVATTGERFTYDELGERADRFAAALQDRGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + + +GAI +N RL IL + ++ D+ + + E+
Sbjct: 64 PNTHYHLEAAYGIMQTGAIHTPLNYRLTPDDFEYILSDAGVDAIYADYDFAEKIEEI--- 120
Query: 132 FPPHSKTPKLVLITDDK---------EISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
+ P +T+D E SSS + +F + +L + +
Sbjct: 121 ---RDEVPTETFVTNDADAVEGGEAGEAGRSSSDSSDVEWEEF----DAVLKEAGTDYH- 172
Query: 183 VRPKSDLDPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFH 241
RP+ D ++ +NYT GTT PKGV + ++ I A + + LWTLPMFH
Sbjct: 173 -RPEMSEDEIITINYTSGTTGDPKGVCRTHRCETIHAYLLVGHQEITDDDTYLWTLPMFH 231
Query: 242 NNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL-----SSSPE 296
NGW + +GA +VC R DA +F +R V++MCGAP VLN+L PE
Sbjct: 232 ANGWGHIFAVTGIGAKHVCTRGVDAAEIFEAVRSEDVSYMCGAPTVLNMLVTYYQEHDPE 291
Query: 297 AKQLDRPVRILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
+R VR+ TAGS PP + E + + H YG TE G ++ + + + +
Sbjct: 292 TTG-ERDVRLATAGSAPPEATIRTVEDEFDWYLKHVYGATE-TGPLITTSDARRHFEDGS 349
Query: 356 RERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATS 415
+R +K RQG+ +G TE+ +VD E G + RD +T GE+V+RG +M Y + P+AT
Sbjct: 350 DDRFRIKKRQGLAYLG-TEIRVVD-EDGTDIPRDDETLGEVVVRGNQIMEKYWEKPDATE 407
Query: 416 KCMKD---GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEA 472
D G Y+TGD+ + +G + I+DR KD+IISGGENISS E+E L+ H V +
Sbjct: 408 AAFNDRVEGYYHTGDLATIDDNGMIAIQDRKKDIIISGGENISSIELEDTLFDHDAVADV 467
Query: 473 AVVGRPDPFWQEIPCAFVSLKTGT-DSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDEL 531
AV+ P W E P A+V +G D G+ TE D+ + R + Y + + F++EL
Sbjct: 468 AVIPAPSDEWGETPKAYVVPASGDPDDPGV--TESDLEAFTRETLAGYKTVRRIEFVEEL 525
Query: 532 PKTATGKVQKYVL 544
P TATGKVQKY L
Sbjct: 526 PTTATGKVQKYEL 538
>gi|448563686|ref|ZP_21635613.1| acyl-CoA synthetase [Haloferax prahovense DSM 18310]
gi|445717625|gb|ELZ69339.1| acyl-CoA synthetase [Haloferax prahovense DSM 18310]
Length = 538
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 186/539 (34%), Positives = 272/539 (50%), Gaps = 38/539 (7%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
F++RA T D +++ D +T+++ R + +++L S G+ G ++V+ PN
Sbjct: 10 FLDRARTYYGDYEAVVGVDGERFTYAEFGERVDRFSAALQSRGVEKGDRIAVLDPNTHCH 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E+ F GA+ +N RL +L S + +V+ D+ + + V
Sbjct: 70 LEVAFGAMQCGALHVPLNYRLTTEDYEYLLSDSGASVVYADYQYAGKIEAV------RDD 123
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMV-LNY 196
P V +T+D P D++D +E L + D + RP+ D ++ +NY
Sbjct: 124 VPAEVFVTND----------PAAVDGDWLD-FEAFLDEADAD-DYERPEMSEDELITINY 171
Query: 197 TWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGA 256
T GTT PKGV + ++ + A I + V LWTLPMFH NGW + GA
Sbjct: 172 TSGTTGDPKGVCRTHRTESLHAQLVTIHHHISDDDVYLWTLPMFHVNGWGHIYAVTGRGA 231
Query: 257 TNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE----AKQLDRPVRILTAGSP 312
+VC R DA VF IR V+ C AP VL++L E A D PVR+ AGS
Sbjct: 232 KHVCTRGVDAEQVFDAIRDEDVSFFCCAPTVLSILREYAEEHDPAYAGDNPVRVTAAGSA 291
Query: 313 PPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE---RASLKARQGVR 368
P+ + TES + + YG TE + + N+L E R SLK RQGV
Sbjct: 292 APSATIRHTESEFDWEFTQLYGATETGPLIATS----DANRLIPDEGGLRFSLKQRQGVA 347
Query: 369 TIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYYT 425
+G T++ +VD E G V RD T GE+V+RG +M Y P+ T D G Y+T
Sbjct: 348 PLG-TDLRVVD-EDGEQVPRDDATIGEVVVRGNQVMEKYWNKPDETHDAFNDRLEGWYHT 405
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+ +++ DG + I+DR KD+IISGGENISS E+E L+ H V + AV+ P W E
Sbjct: 406 GDLAVVNEDGMIAIQDRKKDIIISGGENISSVELEDTLFDHDAVGDVAVIPAPSEKWGET 465
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P AFV G +T E+ + +Y R R+ Y + F++E+PKTATGK+QKY L
Sbjct: 466 PKAFVVPANGDVENPGITAEE-LAEYTRDRLAGYKAIREFEFVEEIPKTATGKIQKYEL 523
>gi|448510755|ref|ZP_21615968.1| AMP-dependent synthetase and ligase [Halorubrum distributum JCM
9100]
gi|448523760|ref|ZP_21618947.1| AMP-dependent synthetase and ligase [Halorubrum distributum JCM
10118]
gi|445695509|gb|ELZ47611.1| AMP-dependent synthetase and ligase [Halorubrum distributum JCM
9100]
gi|445700833|gb|ELZ52824.1| AMP-dependent synthetase and ligase [Halorubrum distributum JCM
10118]
Length = 538
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 183/542 (33%), Positives = 270/542 (49%), Gaps = 32/542 (5%)
Query: 13 PLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ D T YT+++ R + +++L + GI G V+V+
Sbjct: 4 PLLTTDFLDRARRHYADEEAVLAVDGTRYTYAELGERADRFSAALQARGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL S +L + ++ D ++ + +
Sbjct: 64 PNTHYHLEAAYGAMQVGAVHTPLNYRLTPDDFSYMLSDAGVDAIYADAEYAANVEAIRDE 123
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P + L D + D YE RP+ D D
Sbjct: 124 VPTET-----FLTNDADAVEGDWESFDAALDDADPDAYE-------------RPEMDEDE 165
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++A + A I + V LWTLPMFH NGW +
Sbjct: 166 VITINYTSGTTGDPKGVCRTHRAETLHAYLISIHQEITDDDVYLWTLPMFHVNGWGHIYA 225
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL----SSSPEAKQLDRPVRI 306
GA +VC R D F IR V++ C AP VLN+L + A D VR+
Sbjct: 226 ITGAGARHVCTRGVDVAETFDRIRGEDVSYFCAAPTVLNMLGDHHAEHGGATTGDNDVRV 285
Query: 307 LTAGS-PPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
TAG+ PP A + E G+ + H YG TE + + K +++ A +R ++K Q
Sbjct: 286 ATAGAAPPEATIRTVEEEFGWDLKHVYGATETGPLITTSDAKRHFDE-GADDRFAVKKTQ 344
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GR 422
G+ +G T+V +VD E G V DG+T GEIV+RG +M Y PEAT + + G
Sbjct: 345 GIGYLG-TDVRVVD-ENGEDVAADGETIGEIVVRGNQVMDRYWNKPEATEEAFSERLEGY 402
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
Y+ GD+ ++ DG++ I+DR KD+IISGGENISS E+E L+ H +V++ AV+ PD W
Sbjct: 403 YHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDTLFEHDVVSDVAVIPAPDERW 462
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E P AFV ++G T E+ + + R R+ Y P V F+ ELP TATGK+QKY
Sbjct: 463 GETPKAFVVPESGDPDDAGATPEQ-LKAFVRERVADYKTPGEVEFVAELPTTATGKIQKY 521
Query: 543 VL 544
L
Sbjct: 522 EL 523
>gi|429192305|ref|YP_007177983.1| acyl-CoA synthetase [Natronobacterium gregoryi SP2]
gi|429136523|gb|AFZ73534.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Natronobacterium gregoryi SP2]
Length = 536
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 185/546 (33%), Positives = 271/546 (49%), Gaps = 38/546 (6%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
PL F+E+A T D +++ D +T+ + R + +++L GI G V+V
Sbjct: 2 ETPLIVTDFLEQARTHYADEEAVVATDGQRFTYDELGERADRFSAALQERGIEKGDRVAV 61
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+ PN E + GAIF +N RL IL + ++ D+ V
Sbjct: 62 LDPNTHYHLEAAYGSMQLGAIFTPVNYRLTPNDYEYILSDAGVDAIYADYEY------VE 115
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDL 189
+ P +T+D + S + ++++L + +F RP+
Sbjct: 116 KIEAIRDDVPTETFVTNDADAVSGE-----------WEEFDDVLEEAGTEFE--RPELAE 162
Query: 190 DPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D ++ +NYT GTT PKGV + ++ + A I + LWTLPMFH NGW
Sbjct: 163 DEIITINYTSGTTGDPKGVCRTHRTETLHAYLMSIYHEITSDDTYLWTLPMFHVNGWGHI 222
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL-----DRP 303
+ +GAT+VC R DA TV + IR+ V+ +C AP VLN L E + +
Sbjct: 223 YAVTGMGATHVCTRGVDADTVVSAIREEDVSFLCAAPTVLNQLIDYYENEDEPEMSGSKQ 282
Query: 304 VRILTAGSPPPAPVLLRTES-LGFIVSHGYGKTEIAG-VNVSCAWKPKWNKLPARERASL 361
VR+ TAGS PP + E G+ + H YG TE V +S A + + R +
Sbjct: 283 VRVTTAGSAPPEATIRAVEDRFGWYLKHLYGATETGPLVTISDAKR----LIDDENRFEI 338
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD- 420
K RQG+ +G T+V +VD E G V RD QT GE+V+RG +M Y PE T D
Sbjct: 339 KKRQGIGVLG-TDVRVVD-EDGNDVPRDDQTLGEVVVRGNQVMDRYWNKPEETEAAFNDR 396
Query: 421 --GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
G Y+TGD+ + + + ++DR KD+IISGGENISS E+E VL+ H V +AAV+ P
Sbjct: 397 LEGYYHTGDLATVEENRLIALRDRKKDIIISGGENISSIELEDVLFDHDAVADAAVIPAP 456
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
W E P AFV G D + ++ +Y R R+ Y V + V F+++LPKTATGK
Sbjct: 457 SEEWGETPKAFVVPSNG-DPSDPPVSAVELTEYTRDRLASYKVVRRVEFVEDLPKTATGK 515
Query: 539 VQKYVL 544
+QKY L
Sbjct: 516 IQKYEL 521
>gi|448397547|ref|ZP_21569580.1| AMP-dependent synthetase and ligase [Haloterrigena limicola JCM
13563]
gi|445672646|gb|ELZ25217.1| AMP-dependent synthetase and ligase [Haloterrigena limicola JCM
13563]
Length = 537
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 180/545 (33%), Positives = 279/545 (51%), Gaps = 35/545 (6%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
PL F++RA D +I+ +T+ + R +L++ L GI G V+V
Sbjct: 2 EVPLLVTDFLDRARKYYGDEEAIVATTGERFTYEEFGDRADRLSTVLQERGIEKGDRVAV 61
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+ PN E + + GAI +N RL +L S++K + D+ + + +
Sbjct: 62 LDPNTHYQLESAYGIMQLGAIHTPLNYRLTPEDYEYLLNDSDTKAIIADYEYADKIEAI- 120
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SD 188
P + IT+D + D+ D +++++A +P + RP+ S+
Sbjct: 121 -----RDDVPTEIFITNDADEVE----------GDWED-FDDLIADVEPDYE--RPEMSE 162
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + +NYT GTT PKGV++ ++ + A I + V LWTLPMFH NGW
Sbjct: 163 DDVITINYTSGTTGDPKGVMRTHRTESLHAQLVTIHHEISDDDVYLWTLPMFHVNGWGHI 222
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL----DRPV 304
+ +GA +VC R DA +F I V+ +C AP VL++L E + D P+
Sbjct: 223 YAITGIGAKHVCTRGVDAEEIFQQINDEDVSFLCCAPTVLSMLDEYYEENDVSTEGDNPM 282
Query: 305 RILTAGSPPPAPVLLRT--ESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLK 362
R+ AG+ PP V +RT E+ G+ YG TE G + + + + ER LK
Sbjct: 283 RVTAAGAAPPESV-IRTVEETFGWHFRQLYGATE-TGPLIGTSATRRLIDEDSEERFGLK 340
Query: 363 ARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
RQG+ + TE+++VD + G V D ++ GEI++RG +M GY + PE T + D R
Sbjct: 341 KRQGIAPLA-TEIEVVD-DDGNEVPWDDESIGEILVRGNQVMEGYWEKPEETEEAFNDKR 398
Query: 423 ---YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPD 479
++TGD+ +++ G L I+DR KD+IISGGENISS E+E L+ H V + AV+ P
Sbjct: 399 EGWFHTGDLAVVNEKGMLSIQDREKDIIISGGENISSIELEDTLFDHEAVADVAVIPSPS 458
Query: 480 PFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKV 539
W E P AFV + + D +E ++ ++ R R+ Y V V F++ LPKTATGK+
Sbjct: 459 EKWGETPKAFV-VPSNDDPQNPPVSEDELTEFTRERLAGYKVVHRVEFVNSLPKTATGKI 517
Query: 540 QKYVL 544
QKY L
Sbjct: 518 QKYEL 522
>gi|398409606|ref|XP_003856268.1| hypothetical protein MYCGRDRAFT_66052 [Zymoseptoria tritici IPO323]
gi|339476153|gb|EGP91244.1| hypothetical protein MYCGRDRAFT_66052 [Zymoseptoria tritici IPO323]
Length = 592
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 193/569 (33%), Positives = 293/569 (51%), Gaps = 59/569 (10%)
Query: 14 LTPLGFIERAATACDDCPSIIY---NDTTY--TWSQTYRRCLQLASSLSSFGINPGHVVS 68
L+P F+ RAA+ + ++ + N+ T T+ QT R LA L G V
Sbjct: 41 LSPTLFLPRAASIEPEAIAVYHKTANEKTLRRTYQQTADRARGLAYYLKKHGFKR---VG 97
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
++ N PA E + + + A+ IN RL I+ I H+E ++ VD LL
Sbjct: 98 ILCTNTPAFLESIYGIGAAAAVNVAINYRLKEDDITYIFDHAEVDMIIVDAEFQHLLNGF 157
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKG------DPQFSW 182
L P K P ++ D + + P Y+ + +G + W
Sbjct: 158 RKLHP---KVPFII----DTDTDQDTGP------------YDQAVLEGLQEDERNGGHGW 198
Query: 183 VRPKSDL---DPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSV------ 232
R ++++ D M+ + YT GTTS PKGV +++ ++ +V ++I+ + S
Sbjct: 199 ARLETEVAQEDSMLAIAYTSGTTSRPKGVEYTHRSAYLASVGNVIESALNTHSSKATRCH 258
Query: 233 LLWTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLS 292
LWTLPMFH GW+F W V T+ CLRK + P ++ L+++ ++H AP V LL
Sbjct: 259 YLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKIEYPYIWKLLKEEHISHFNAAPTVNTLLC 318
Query: 293 SSPEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNK 352
+ P A++L+ PVR+ A SPP A + E+L H YG TE G P+W+
Sbjct: 319 ADPNAEKLEDPVRVTVAASPPTAHLFETMENLNLRPVHVYGLTETYGPITKGYQLPEWDN 378
Query: 353 LPARERASLKARQGVRTIGLTEVDIVDP---ETGL--------SVKRDGQTRGEIVMRGG 401
L +E+ + ARQG ++ ++ E+G +V +DG+ GEIV G
Sbjct: 379 LDVKEKYAKMARQGHGSVVSLPARVIKTKMDESGAWENTDKIENVAKDGKEIGEIVFVGN 438
Query: 402 SLMLGYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIES 461
GY KDP AT K G ++GD+ + HPDG ++I DR+KD+IISGGENISS +E
Sbjct: 439 ICAKGYYKDPAATRKLFAGGVQHSGDLAVWHPDGSIQILDRAKDIIISGGENISSVALEG 498
Query: 462 VLYSHPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRAR--IPRY 519
+L +HP V EAA V D W E P AF+++K+G G +T E +II + + + I R+
Sbjct: 499 MLVTHPDVLEAACVAVKDEQWGERPKAFITVKSGKQ--GSITGE-EIISWAKNKSGISRF 555
Query: 520 MVPKTVVFIDELPKTATGKVQKYVLGDIA 548
MVP+ V ++ELPKT+TGK++K VL D A
Sbjct: 556 MVPREVEILEELPKTSTGKLRKNVLRDWA 584
>gi|448403242|ref|ZP_21572222.1| long-chain-fatty-acid--CoA ligase [Haloterrigena limicola JCM
13563]
gi|445664710|gb|ELZ17415.1| long-chain-fatty-acid--CoA ligase [Haloterrigena limicola JCM
13563]
Length = 536
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 184/546 (33%), Positives = 281/546 (51%), Gaps = 42/546 (7%)
Query: 13 PLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA T + +I+ N +T+ + R +L+++L G+ G V+V+A
Sbjct: 4 PLLVPQFLDRARTYFGEEEAIVAANGDRFTYDEFGERADRLSAALQDRGVEKGDRVAVLA 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + + GA+ +N RL +L + + DH + + V
Sbjct: 64 PNTHYHLESVYGITQIGAVHTPLNYRLVPSDFEYMLNDCDVTAIIADHEYADQVEAVRDE 123
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P + + ++ E+ D+ D ++ +LA +P + RP+ D +
Sbjct: 124 VPVET-----FIASNADEVD-----------GDWED-FDEVLADTEPTYD--RPEMDEED 164
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV++ ++ I A S + + V LWTLPMFH NGW +
Sbjct: 165 IITINYTSGTTGDPKGVMRNHRGETIHAYCSSVHRDISDDDVYLWTLPMFHVNGWGHVFS 224
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQ----LDRPVRI 306
+G T+VC R DA VF I++ V++ C AP VLN+L + + D VR+
Sbjct: 225 ITGIGGTHVCTRGVDAGDVFETIQEEDVSYFCAAPTVLNMLLDYYDENEPVTTGDNDVRV 284
Query: 307 LTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA--SLKA 363
TAGS PP + E G+ ++H YG TE + + + N+ ++A +K
Sbjct: 285 ATAGSAPPEATIRTVEDEFGWELAHVYGATETGPLIATS----EVNRFLEDDQARYDIKK 340
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD--- 420
RQG+ +G TE+ +VD + G V D T GEIV+RG +M GY ++PE T + D
Sbjct: 341 RQGIPMLG-TEIRVVD-DDGNEVPWDDATIGEIVVRGNQIMEGYWENPEETERAFNDRLE 398
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G ++ GD+ + +G + I+DR KD+IISGGENISS E+E LY HP V E AV+ P
Sbjct: 399 GWFHMGDLATVDENGMIAIQDRKKDIIISGGENISSIELEDTLYEHPEVAEVAVIPSPSD 458
Query: 481 FWQEIPCAFVSLKTG--TDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
W E P AF+ G TD G T ++II + R + Y V + V F+ +LP TATGK
Sbjct: 459 QWGETPKAFIVPANGDPTDPG---VTAEEIIDFTRENLASYKVVRRVEFVKQLPTTATGK 515
Query: 539 VQKYVL 544
V+KY L
Sbjct: 516 VEKYEL 521
>gi|325087678|gb|EGC40988.1| AMP dependent synthetase and ligase [Ajellomyces capsulatus H88]
Length = 581
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 194/556 (34%), Positives = 287/556 (51%), Gaps = 35/556 (6%)
Query: 7 NPANSCPLTPLGFIERAATACDDCPSIIYNDTT-----YTWSQTYRRCLQLASSLSSFGI 61
+P N L+P F+ RAA D +I + T ++ +T R A L G
Sbjct: 31 HPFNRHTLSPTFFLPRAAAIEPDAQAIYHVTTNNKVLRRSYIETADRARGFAYYLKRHGF 90
Query: 62 NPGHVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLS 121
V ++ PN PA E FA+ +GA+ +N RL IS I HSE + VD
Sbjct: 91 KR---VGILCPNTPAFLESIFAIAAAGAVNVAVNYRLKPEDISYIFNHSEVDAIVVDEEF 147
Query: 122 SSLLLEVVSLFPPHSKTPKLVLITDDKEISSSSSPP--PRIPPADFVDTYENMLAKGDPQ 179
LL E F + L++ TD + S P + DT + G+
Sbjct: 148 VPLLNE----FKKQNGHVPLIIDTDTDAVEGELSGPFDQAVLEGLHFDT-----SSGNRG 198
Query: 180 FSWVRPKS-DLDPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVP---KQSVLL 234
+ + ++ D D ++ L YT GTTS PKGV ++ ++ A+ ++I+ + + L
Sbjct: 199 WQGLEAQTPDEDALIALAYTSGTTSRPKGVEYIHRGCYLAALANVIESGLNFNRGRCRYL 258
Query: 235 WTLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSS 294
WTLPMFH GW+F W V T+ CLRK D ++ L+++ GVTH C AP V +L +S
Sbjct: 259 WTLPMFHAMGWTFPWAVTAVRGTHYCLRKVDYSLIWRLLKEEGVTHYCAAPTVNIVLCNS 318
Query: 295 PEAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLP 354
EA+ L PVR+ A SPP + + L H YG TE G + P+W+ +P
Sbjct: 319 KEAEVLPSPVRVTVAASPPTPHLFEQMAKLNLQPVHVYGLTETYGPITKGYYLPQWDTIP 378
Query: 355 ARERASLKARQGVRTIGLTEVDIVD---PE-TGLSVKRDGQTRGEIVMRGGSLMLGYLKD 410
A ++ ARQG + V ++ PE T + V+++G+ GE+V G GY K+
Sbjct: 379 AEDKYKKMARQGHGFLTSLPVRVIKTDVPEGTIIDVEKNGEEIGEVVFVGNICAKGYYKN 438
Query: 411 PEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVN 470
+ T K G ++GD+ + HPDG ++I DR+KD+IISGGENISS +ES+L +HP V
Sbjct: 439 VDDTKKLFSGGVLHSGDLAVWHPDGAIQILDRAKDIIISGGENISSVALESMLATHPDVF 498
Query: 471 EAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFI 528
E VV PD W E P AF++++ G G KD+I++ + + R+MVP+ V +
Sbjct: 499 EVGVVAVPDSHWGERPKAFITVRDGKKLDG-----KDVIEWAKHVGGMSRFMVPREVETV 553
Query: 529 DELPKTATGKVQKYVL 544
ELPKT+TGKV+K VL
Sbjct: 554 RELPKTSTGKVKKNVL 569
>gi|435846240|ref|YP_007308490.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Natronococcus
occultus SP4]
gi|433672508|gb|AGB36700.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Natronococcus
occultus SP4]
Length = 540
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 183/544 (33%), Positives = 273/544 (50%), Gaps = 30/544 (5%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
PL F++RA D +I+ YT+++ R +L+S L GI G V+V
Sbjct: 2 EVPLLVTDFLDRARKYYGDEEAIVATTGDRYTYAEFGDRADRLSSVLQGRGIEKGDRVAV 61
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+ PN E + + GA+ +N RL + +L + V D+ + + V
Sbjct: 62 LDPNTHYHLESAYGIMQLGAVHTPLNYRLTPEDYAYMLDDAGVDAVVADYEYAHKIDAV- 120
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDL 189
+ P I D + +++D +E ++ + D + RP+
Sbjct: 121 -----RDEVPTETFIATDADALEDCD-------GEWLD-FEALIGEADADYD--RPEMHE 165
Query: 190 DPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D ++ +NYT GTT PKGV++ ++ + A I + V LWTLPMFH NGW
Sbjct: 166 DDVITINYTSGTTGDPKGVMRTHRTESLHAQLVTIHHEISDDDVYLWTLPMFHVNGWGHI 225
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL----DRPV 304
+ +GA +VC R DA T IR+ V+ +C AP VL L E + D P+
Sbjct: 226 YAITGMGAKHVCTRGTDAETNLRQIREEDVSFLCCAPTVLTLFEEYLEEADVPTTGDAPM 285
Query: 305 RILTAGSPPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
R+ AG+ PP ++ E G+ YG TE + + A + ++ + ER +LK
Sbjct: 286 RVTAAGAAPPESIIETVEEEFGWHFRQLYGATETGPLIGTSATRRLIDE-DSEERFALKK 344
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR- 422
RQG+ + TEV++VD + G V D +T GEIV+RG +M GY + PE T D R
Sbjct: 345 RQGIAPLA-TEVEVVDDD-GTEVPWDDETIGEIVVRGNQVMDGYWEKPEETEAAFNDKRE 402
Query: 423 --YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
++TGD+ +++ +G + I+DR KD+I+SGGENISS E+E L+ HP V + A++ P
Sbjct: 403 GWFHTGDLAVVNENGLMAIQDRKKDIIVSGGENISSIELEDALFDHPDVGDVAIIPAPSE 462
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E P AFV G D TE D+ Y R R+ Y V V F+DELPKTATGK+Q
Sbjct: 463 KWGETPKAFVVPANG-DPENPQVTEDDLTAYTRERLAGYKVVHRVEFVDELPKTATGKIQ 521
Query: 541 KYVL 544
KY L
Sbjct: 522 KYEL 525
>gi|154312808|ref|XP_001555731.1| hypothetical protein BC1G_05105 [Botryotinia fuckeliana B05.10]
gi|347839764|emb|CCD54336.1| similar to acyl CoA synthetase [Botryotinia fuckeliana]
Length = 582
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 183/548 (33%), Positives = 277/548 (50%), Gaps = 25/548 (4%)
Query: 14 LTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINPGHV-VSVIA 71
L+P F+ RAA D P+I + T +++Y+ A L+ + N + ++
Sbjct: 40 LSPTFFLPRAAVIEPDAPAIHHVTANGQTITRSYQEFADRARGLAYYLKNHKLARIGILC 99
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN PA E F V +GAI +N RL I I + + + VD E V L
Sbjct: 100 PNTPAFLESIFGVAAAGAIHVGVNYRLKEEDIIYIFEFAGVDCIIVDR-------EFVGL 152
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLD- 190
+ K + V I D++ Y+ L G + + ++D +
Sbjct: 153 LEGYRKRNQGVKIIVDEDTDRDEGEFDHAVLEGL--KYDAEL--GGRGWDGLHAQADDED 208
Query: 191 -PMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVP---KQSVLLWTLPMFHNNGWS 246
+ + +T GTT+ PKGVV ++ ++ A+ ++++ + + LWTLPMFH GW+
Sbjct: 209 GTIAIPFTSGTTAKPKGVVYTHRGAYLAAMGNVVESGLNFHRGRCGYLWTLPMFHAVGWT 268
Query: 247 FTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDRPVRI 306
F W V T+ CLRK D P ++ L++ +TH AP V LL +S EA +L PVR+
Sbjct: 269 FPWAVTAVRGTHFCLRKIDYPLIWNLLKSQPITHFNAAPTVNTLLCASKEAAKLPNPVRV 328
Query: 307 LTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQG 366
A SPP A + ++ I H YG TE G P W +P +E+ + ARQG
Sbjct: 329 TVAASPPTAHLFETMTNVNLIPVHVYGMTETYGPITKGYHMPIWEDIPLKEKYNRMARQG 388
Query: 367 VRTIGLTEVDIVDPETG----LSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR 422
+ + IV P+ + V RDG+ GEI+ G GY D EAT K G
Sbjct: 389 HGFLTSLNLRIVKPDQPDDKLIDVARDGKEIGEIIFLGNICAKGYYNDEEATRKLFAGGA 448
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
++GD+ + H DG +I DR+KD+IISGGENISS +E++L H + EA VV D W
Sbjct: 449 LHSGDLAVWHEDGSAQILDRAKDIIISGGENISSVALEAMLVQHEGILEAGVVAVVDEKW 508
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPKTATGKVQ 540
E P AFV+++ G +G +D++++ + + I R+MVP+ V+ + ELPKT+TGKVQ
Sbjct: 509 GECPVAFVTVREG-GAGNEGLKGEDVVRWAKEESSISRFMVPREVIVVKELPKTSTGKVQ 567
Query: 541 KYVLGDIA 548
K VL + A
Sbjct: 568 KNVLREWA 575
>gi|409721246|ref|ZP_11269454.1| AMP-dependent synthetase and ligase [Halococcus hamelinensis 100A6]
gi|448724871|ref|ZP_21707375.1| AMP-dependent synthetase and ligase [Halococcus hamelinensis 100A6]
gi|445784691|gb|EMA35491.1| AMP-dependent synthetase and ligase [Halococcus hamelinensis 100A6]
Length = 532
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 193/537 (35%), Positives = 277/537 (51%), Gaps = 40/537 (7%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
F++RA D ++ +D T YT+++ + +++++LS G+ G V+++APN
Sbjct: 10 FLDRAVDCYSDVVGVVAHDGTEYTYAEFAEQVNRVSNALSGMGVGQGDRVALLAPNTHYF 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E + V GA+F +N L IL E+++V D+ + + V P
Sbjct: 70 LETMYGVNQLGAVFVPMNYLLTPSDFEYILDDCEARVVIADYDYAEKVEAVRESVPAEGF 129
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SDLDPMVLNY 196
D ++ D YE+ LA G + RP+ ++ D +NY
Sbjct: 130 VGYRADDID----------------GEWTD-YEDWLA-GASADAPDRPEIAEDDDASINY 171
Query: 197 TWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGA 256
T GTT PKGVV+ ++ A+ V LWTLPMFH NGW T+ +G
Sbjct: 172 TSGTTGDPKGVVRTHRTEHWHALVLNQHMEVADDDTYLWTLPMFHCNGWGHTYAITGMGG 231
Query: 257 TNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL----SSSPEAKQL-DRPVRILTAGS 311
T+VC R FD +R+H V+++ GAP VLN L P+A +R VRI TAGS
Sbjct: 232 THVCQRTFDPEGTLRRVREHDVSYLSGAPTVLNRLIAYYDDHPDAVTTGEREVRISTAGS 291
Query: 312 PPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTI 370
P L E +G+ V H YG TE A + ++ + P+ +L R R LK QG I
Sbjct: 292 APATATLSTVEEEIGWRVIHLYGLTETAPM-ITTSHSPR--RLAQRGR-DLKVNQGSEMI 347
Query: 371 GLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYYTGD 427
T+V +VD + G V RDG T GEIV+RG +M YL P+AT + G ++TGD
Sbjct: 348 A-TDVRVVDDD-GRDVPRDGATIGEIVVRGNQVMDRYLNKPDATHEAFNAKLPGYFHTGD 405
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+ + DG + I+DRSKD+IISGGEN+SS +E VLY HP V +AAV+ P W E
Sbjct: 406 LATIDEDGMVAIQDRSKDIIISGGENVSSIGVEDVLYDHPDVAKAAVIPTPSDEWGEAVT 465
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
A V K+G + + I ++ + RY VPK V F+D+LP+TATGKVQKY L
Sbjct: 466 ALVVAKSGASP-----SAEAIREFAGEHLARYQVPKRVEFVDDLPETATGKVQKYQL 517
>gi|448495679|ref|ZP_21610124.1| AMP-dependent synthetase and ligase [Halorubrum californiensis DSM
19288]
gi|445687772|gb|ELZ40047.1| AMP-dependent synthetase and ligase [Halorubrum californiensis DSM
19288]
Length = 538
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 185/543 (34%), Positives = 268/543 (49%), Gaps = 34/543 (6%)
Query: 13 PLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ D T YT+++ R + +++L + GI G V+V+
Sbjct: 4 PLLTTDFLDRARRHYADEEAVLAVDGTRYTYAELGERADRFSAALQARGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL S +L + ++ D + + +
Sbjct: 64 PNTHYHLEAAYGAMQVGAVHTPLNYRLTPGDFSYMLSDAGVDAIYADAEYAPNVEAIRDE 123
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P + L D + D YE RP+ D D
Sbjct: 124 VPTET-----FLTNDADAVEGDWESFDAALDDADPDAYE-------------RPEMDEDE 165
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++A + A I + V LWTLPMFH NGW +
Sbjct: 166 VITINYTSGTTGDPKGVCRTHRAETLHAYLISIHQEITDDDVYLWTLPMFHVNGWGHIYA 225
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL----SSSPEAKQLDRPVRI 306
GA +VC R D F IR V++ C AP VLN+L + D VR+
Sbjct: 226 ITGAGARHVCTRGVDVAETFDRIRSEDVSYFCAAPTVLNMLGDHYAEHGGETTGDNDVRV 285
Query: 307 LTAGSPPPAPVLLRT--ESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
TAG+ PP +RT E G+ + H YG TE + + K ++++ A +R ++K
Sbjct: 286 ATAGAAPP-ETTIRTVEEEFGWDLKHVYGATETGPLITTSDAKRHFDEM-ADDRFAVKKT 343
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---G 421
QG+ +G T+V +V E G V DG+T GEIV+RG +M Y PEAT + + G
Sbjct: 344 QGIGYLG-TDVRVV-GEDGEDVAADGETIGEIVVRGNQVMDRYWNKPEATEEAFSERLEG 401
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
Y+ GD+ ++ DG++ I+DR KD+IISGGENISS E+E L+ H V EAAV+ PD
Sbjct: 402 YYHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDTLFEHDAVAEAAVIPAPDER 461
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P AFV +G TTE+ + + R R+ Y P V F+ ELP TATGK+QK
Sbjct: 462 WGETPKAFVVPASGDPDDAGATTEE-LKTFVRERVADYKTPGEVEFVAELPTTATGKIQK 520
Query: 542 YVL 544
Y L
Sbjct: 521 YEL 523
>gi|449304373|gb|EMD00380.1| hypothetical protein BAUCODRAFT_99578 [Baudoinia compniacensis UAMH
10762]
Length = 597
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 191/566 (33%), Positives = 284/566 (50%), Gaps = 52/566 (9%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTT-----YTWSQTYRRCLQLASSLSSFGINPGHVVS 68
L+P ++ RAA D ++ + T+++T R A L G V
Sbjct: 47 LSPTFWLWRAAQIEPDALAVYHKTVNGPILKRTYAETSERAKGFAYFLRKKGYKR---VG 103
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
++ N PA E F + +G + IN RL A ++ I H++ + D E
Sbjct: 104 ILCTNTPAFLEAIFGIGAAGGVHVAINHRLKADDLAYIFDHADVDSIIADE-------EF 156
Query: 129 VSLFPPHSKT-PKLVLI------TDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFS 181
V L + K+ P + +I DD E + R + + A+ + S
Sbjct: 157 VHLLDLYRKSHPNIPIIIDKDTDQDDGEYDQAVLEGLRYDEETGGQGWAGLEAQCVEEDS 216
Query: 182 WVRPKSDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVV------PKQSVLLW 235
+ + YT GTTS PKGV ++ ++ AV ++I+ + + LW
Sbjct: 217 LI---------AIPYTSGTTSRPKGVEYTHRGGYMAAVANIIESGLNTHLSGADRCHYLW 267
Query: 236 TLPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSP 295
TLPMFH GW+F W V T+ LRK D P ++ L++ ++H AP V LL + P
Sbjct: 268 TLPMFHAVGWTFPWAVTAVRGTHYTLRKIDYPEIWRLLKTEKISHYNAAPTVNTLLCADP 327
Query: 296 EAKQLDRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPA 355
A++L PVR+ A SPP A + + +L H YG TE G P W+ LP
Sbjct: 328 NAEKLPEPVRVTVAASPPTAHLFEQMTNLNLQPVHVYGLTETYGPITKGYTMPAWSDLPL 387
Query: 356 RERASLKARQG--------VRTIGLTEVD--IVDPETGLSVKRDGQTRGEIVMRGGSLML 405
+E+ + KARQG R I + D + + V+RDG+ GEIV+ G
Sbjct: 388 KEQYARKARQGHGHITSLPARVIKTKQDDSGAWSSDGVVDVERDGKEIGEIVVAGNICAR 447
Query: 406 GYLKDPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYS 465
GY KD +AT K + G +TGD+ + HPDG ++I DR+KD+IISGGENISS +ES+L +
Sbjct: 448 GYYKDAKATRKLFEGGVLHTGDLAVWHPDGAIQILDRAKDIIISGGENISSLALESMLVT 507
Query: 466 HPMVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRAR--IPRYMVPK 523
HP V EAA VG D W E P AFV++K+G + G +T E+ II++ + + I R+MVPK
Sbjct: 508 HPDVLEAACVGIADEKWGEAPKAFVTVKSGKE--GSVTGEQ-IIEWAKNKSDISRFMVPK 564
Query: 524 TVVFIDELPKTATGKVQKYVLGDIAN 549
+ + ELPKT+TGK++K +L D A
Sbjct: 565 EIEILQELPKTSTGKLRKNILRDWAK 590
>gi|448446178|ref|ZP_21590664.1| AMP-dependent synthetase and ligase [Halorubrum saccharovorum DSM
1137]
gi|445684370|gb|ELZ36748.1| AMP-dependent synthetase and ligase [Halorubrum saccharovorum DSM
1137]
Length = 538
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 183/542 (33%), Positives = 271/542 (50%), Gaps = 32/542 (5%)
Query: 13 PLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ D T YT+++ R + +++L GI G V+V+
Sbjct: 4 PLLTTDFLDRARRHYADEEAVLATDGTRYTYAELAERADRFSAALRERGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GAI +N RL S +L + ++ D ++ + V
Sbjct: 64 PNTHYHLEAAYGAMQVGAIHTPLNYRLTPDDFSYMLSDAGVDAIYADAEYAANVEAVRDE 123
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P + L D + D YE RP+ D D
Sbjct: 124 VPTET-----FLTNDTDAVGGDWESIDDALADADPDGYE-------------RPEMDEDD 165
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++A + A I + V LWTLPMFH NGW +
Sbjct: 166 VITINYTSGTTGDPKGVCRTHRAETLHAYLISIHQEITDDDVYLWTLPMFHVNGWGHIYA 225
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL----SSSPEAKQLDRPVRI 306
+GA +VC R D F IR V++ C AP VLN+L + D VR+
Sbjct: 226 ITGMGARHVCTRGVDVAETFDRIRTEDVSYFCAAPTVLNMLGDHYAEHGGTTTGDNDVRV 285
Query: 307 LTAG-SPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
TAG +PP A + E G+ + H YG TE G V+ + + + + +R ++K Q
Sbjct: 286 ATAGAAPPEATIRTVEEEFGWGLKHVYGATE-TGPLVTTSDAKRHYEADSDDRFAVKKTQ 344
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK---DGR 422
G+ +G T+V +VD E G V DG+T GEIV+RG +M Y PEAT + +G
Sbjct: 345 GIGYLG-TDVRVVD-ENGEDVAADGETIGEIVVRGNQVMDRYWNKPEATEEAFSERLEGY 402
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
Y+ GD+ ++ DG++ I+DR KD+IISGGENISS E+E L+ H +V++ AV+ PD W
Sbjct: 403 YHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDALFEHDIVSDVAVIPAPDERW 462
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E P AFV ++G D T +++ + R R+ Y P V F+++LP TATGK+QKY
Sbjct: 463 GETPKAFVVPESG-DPDDPGATPEELKAFVRERVADYKTPGEVEFVEKLPTTATGKIQKY 521
Query: 543 VL 544
L
Sbjct: 522 EL 523
>gi|448728077|ref|ZP_21710412.1| AMP-dependent synthetase and ligase [Halococcus morrhuae DSM 1307]
gi|445788174|gb|EMA38895.1| AMP-dependent synthetase and ligase [Halococcus morrhuae DSM 1307]
Length = 532
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 193/537 (35%), Positives = 270/537 (50%), Gaps = 40/537 (7%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
F++RA D ++ +D T YT+ + R Q++ +L G+ G V++++PN
Sbjct: 10 FLDRAVDLYSDVVGVVAHDGTEYTYGEFAERVNQVSHALREMGVEQGDRVALLSPNTHYF 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E + V GA+F +N L IL E+ +V DH + + V P
Sbjct: 70 LETLYGVNQLGAVFVPMNYLLVPDDFDYILNDCEADVVIADHEYAENVEAVRESVP---- 125
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SDLDPMVLNY 196
+ S D++D YE LA P RP S+ D +NY
Sbjct: 126 ------------VESFVGYEADAIDGDWLD-YEEWLA-AQPAERPERPDISEDDDASINY 171
Query: 197 TWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGA 256
T GTT PKGVV+ ++ A+ + LWTLPMFH NGW T+ GA
Sbjct: 172 TSGTTGDPKGVVRTHRTEHWHALVLNQHKEIRDDDTYLWTLPMFHCNGWGHTYAITGTGA 231
Query: 257 TNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL----SSSPEAKQL-DRPVRILTAGS 311
T+VC R F+ +R++ V++MCGAP VLN L +P+ +R VRI TAGS
Sbjct: 232 THVCQRTFEPEGTLRRVREYDVSYMCGAPTVLNRLIAHYDENPDVVTTGERDVRIATAGS 291
Query: 312 PPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTI 370
P L E +G+ V H YG TE A + ++ + P+ +L R LK +QG +
Sbjct: 292 APATATLSSIEDDIGWRVIHLYGLTETAPL-ITSSNSPR--RLAEHGR-DLKVKQGSEVL 347
Query: 371 GLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYYTGD 427
T+V +VD + G V RDG T GEIV++G +M YL PEAT + G ++TGD
Sbjct: 348 A-TDVRVVDDD-GHDVPRDGSTLGEIVVKGNQVMDRYLNKPEATEEAFTAKLPGYFHTGD 405
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+ M DG + I+DR KD+IISGGEN+SS +E VLY HP + +AAV+ P W E
Sbjct: 406 LATMDEDGMVAIQDREKDIIISGGENVSSIAVEDVLYDHPDIAKAAVIPTPSDEWGEAVT 465
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
A V K + G E + + RY VPKTV F+D+LP+TATGKVQKY L
Sbjct: 466 ALVVEKPDAELTGEAVRE-----FAGDHLARYKVPKTVDFVDDLPETATGKVQKYEL 517
>gi|448379026|ref|ZP_21560990.1| AMP-dependent synthetase and ligase [Haloterrigena thermotolerans
DSM 11522]
gi|445665588|gb|ELZ18264.1| AMP-dependent synthetase and ligase [Haloterrigena thermotolerans
DSM 11522]
Length = 537
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 183/543 (33%), Positives = 271/543 (49%), Gaps = 35/543 (6%)
Query: 13 PLTPLGFIERAATAC-DDCPSIIYNDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA T DD + +T+ + R + A++L + GI G V+V+
Sbjct: 4 PLLVPEFLDRARTHYGDDEAVVATTGERFTYDELGERADRFAAALQARGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL IL + ++ D+ + + +
Sbjct: 64 PNTHYHLEAAYGSMQIGAVHTPLNYRLTPDDFEYILSDAGVDAIYADYEYADRIEAI--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P +T+D D+ D ++ +L P + RP+ D
Sbjct: 121 ---RDDVPTETFVTNDAAAVE----------GDWED-FDTLLEDAGPGYD--RPEMSEDE 164
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++ I A + + LWTLPMFH NGW +
Sbjct: 165 IITINYTSGTTGDPKGVCRTHRCETIHAYLLVGHQEITDDDTYLWTLPMFHANGWGHIFA 224
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL-----SSSPEAKQLDRPVR 305
+GAT+VC R DA +F +R V++MCGAP VLN+L PE D VR
Sbjct: 225 VTGIGATHVCTRGVDAAEIFETVRAEDVSYMCGAPTVLNMLIDYYRDHEPETTG-DTDVR 283
Query: 306 ILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
+ TAGS PP + E G+ + H YG TE G ++ + + + + +R +K R
Sbjct: 284 LATAGSAPPEATIRTVEDEFGWYLKHVYGATE-TGPLITTSDARRHFEADSDDRFRIKKR 342
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---G 421
QG+ +G TE+ +VD E G V RD +T GE+V+RG +M Y PEAT + D G
Sbjct: 343 QGLAYLG-TEIRVVD-EDGEDVPRDDETLGEVVVRGNQIMEKYWNKPEATEEAFTDRVEG 400
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
Y+TGD+ + +G + I+DR KD+IISGGENISS E+E L+ H V +AAV+ P
Sbjct: 401 YYHTGDLATVDENGMIAIQDRKKDIIISGGENISSIELEDALFDHEAVADAAVIPAPSDE 460
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P AFV G + ++ E+ + + R ++ Y + V F+ ELP TATGKVQK
Sbjct: 461 WGETPKAFVVPSNGDPTDPPVSPEE-LTAFTREQLAGYKAVRRVEFVAELPTTATGKVQK 519
Query: 542 YVL 544
Y L
Sbjct: 520 YEL 522
>gi|448542059|ref|ZP_21624564.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-646]
gi|448552632|ref|ZP_21630135.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-645]
gi|448553314|ref|ZP_21630288.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-644]
gi|445707398|gb|ELZ59254.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-646]
gi|445708133|gb|ELZ59975.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-645]
gi|445720456|gb|ELZ72129.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-644]
Length = 538
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 186/539 (34%), Positives = 272/539 (50%), Gaps = 38/539 (7%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
F++RA T D +++ D +T+++ R + +++L S G+ G V+V+ PN
Sbjct: 10 FLDRARTYYGDYEAVVGVDGERFTYAEFGERVDRFSAALQSRGVEKGDRVAVLDPNTHYH 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E F GA+ +N RL +L S + +V+ D+ + + V
Sbjct: 70 LEAAFGAMQCGALHVPLNYRLTTEDYEYLLSDSGATVVYADYQYAGKIEAV------RDD 123
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMV-LNY 196
P V +T+D P D++D +E L + D + RP+ D ++ +NY
Sbjct: 124 VPAEVFVTND----------PAAVDGDWLD-FEAFLDEADAD-DYERPEMSEDELITINY 171
Query: 197 TWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGA 256
T GTT PKGV + ++ + A I + V LWTLPMFH NGW + GA
Sbjct: 172 TSGTTGDPKGVCRTHRTESLHAQLVTIHHHIADDDVYLWTLPMFHVNGWGHIYAVTGRGA 231
Query: 257 TNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE----AKQLDRPVRILTAGSP 312
+VC R DA VF I + V+ C AP VL++L E A D PVR+ AGS
Sbjct: 232 KHVCTRGVDAEQVFDAITEEDVSFFCCAPTVLSILREYAEEHDPAYAGDNPVRVTAAGSA 291
Query: 313 PPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE---RASLKARQGVR 368
P+ + TES G+ + YG TE + + N+L E R SLK RQGV
Sbjct: 292 APSATIRHTESEFGWEFTQLYGATETGPLIATS----DANRLIPDEGGLRFSLKQRQGVA 347
Query: 369 TIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYYT 425
+G T++ +VD + G V RD T GE+V+RG +M Y P+ T D G Y+T
Sbjct: 348 PLG-TDLRVVDDD-GEQVPRDDATIGEVVVRGNQVMEKYWNKPDETHDAFNDRLEGWYHT 405
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+ +++ DG + I+DR KD+IISGGENISS E+E L+ H V + AV+ P W E
Sbjct: 406 GDLAVVNEDGMIAIQDRKKDIIISGGENISSVELEDALFDHDAVGDVAVIPAPSEKWGET 465
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P AFV G D T +++ +Y R R+ Y + F++E+PKTATGK+QKY L
Sbjct: 466 PKAFVVPANG-DVENPGVTAEELTEYTRDRLAGYKAIREFEFVEEIPKTATGKIQKYEL 523
>gi|448587034|ref|ZP_21648786.1| acyl-CoA synthetase [Haloferax gibbonsii ATCC 33959]
gi|445724254|gb|ELZ75888.1| acyl-CoA synthetase [Haloferax gibbonsii ATCC 33959]
Length = 538
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 187/539 (34%), Positives = 271/539 (50%), Gaps = 38/539 (7%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
F++RA T D +++ D +T+++ R + +++L S G+ G V+V+ PN
Sbjct: 10 FLDRARTYYGDYEAVVGVDGERFTYAEFGERVDRFSAALQSRGVEKGDRVAVLDPNTHCH 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E F GA+ +N RL +L S + +V+ D+ + + V
Sbjct: 70 LEAAFGAMQCGALHVPLNYRLTTEDYEYLLSDSGASVVYADYQYAGKIEAV------RDD 123
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMV-LNY 196
P V +T+D P D++D +E L + D + RP+ D ++ +NY
Sbjct: 124 VPAEVFVTND----------PAAVDGDWLD-FEAFLDEADAD-DYERPEMSEDELITINY 171
Query: 197 TWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGA 256
T GTT PKGV + ++ + A I + V LWTLPMFH NGW + GA
Sbjct: 172 TSGTTGDPKGVCRTHRTESLHAQLVTIHHHIADDDVYLWTLPMFHVNGWGHIYAVTGRGA 231
Query: 257 TNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE----AKQLDRPVRILTAGSP 312
+VC R DA VF I V+ C AP VL++L E A D PVR+ AGS
Sbjct: 232 KHVCTRGVDAEQVFDAIATEDVSFFCCAPTVLSILREYAEEHDPAYAGDNPVRVTAAGSA 291
Query: 313 PPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE---RASLKARQGVR 368
P+ + TES G+ + YG TE + + N+L E R SLK RQGV
Sbjct: 292 APSATIRHTESEFGWEFTQLYGATETGPLIATS----DANRLIPDEGGLRFSLKQRQGVA 347
Query: 369 TIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYYT 425
+G T++ +VD E G V RD T GE+V+RG +M Y P+ T D G Y+T
Sbjct: 348 PLG-TDLRVVD-EDGERVPRDDATIGEVVVRGNQVMEKYWNKPDETHDAFNDRLEGWYHT 405
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+ +++ DG + I+DR KD+IISGGENISS E+E L+ H V + AV+ P W E
Sbjct: 406 GDLAVVNEDGMIAIQDRKKDIIISGGENISSVELEDTLFDHDAVGDVAVIPAPSEKWGET 465
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P AFV G D T +++ +Y R R+ Y + F++E+PKTATGK+QKY L
Sbjct: 466 PKAFVVPANG-DVENPGVTAEELSEYTRDRLAGYKAIREFEFVEEIPKTATGKIQKYEL 523
>gi|448312998|ref|ZP_21502728.1| AMP-dependent synthetase and ligase [Natronolimnobius
innermongolicus JCM 12255]
gi|445599657|gb|ELY53686.1| AMP-dependent synthetase and ligase [Natronolimnobius
innermongolicus JCM 12255]
Length = 537
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 185/543 (34%), Positives = 277/543 (51%), Gaps = 35/543 (6%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ YT+ + R + +++L GI G V+V+
Sbjct: 4 PLLVTDFLDRARKHYGDAEAVVATTGERYTYDELGERADRFSAALQQRGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL S +L+ +E V+ D+ + +
Sbjct: 64 PNTHYHLEAAYGSMQVGAVHMPLNYRLTPDDFSYMLEDAEVDAVYADYDFAD------KI 117
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P + P IT+D E + ++++LA D + RP+ D D
Sbjct: 118 EPIRDEVPVETFITNDAERVEGE-----------WEAFDDVLA--DAGTDYDRPEMDEDE 164
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
+V +NYT GTT PKGV + ++A I A + V LWTLPMFH NGW +
Sbjct: 165 IVTINYTSGTTGDPKGVCRTHRAETIHAYLITAHQQLQDDDVYLWTLPMFHVNGWGHIYA 224
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL-----SSSPEAKQLDRPVR 305
+GA +VC R DA +F +R V++MCGAP VLN+L + PE + VR
Sbjct: 225 VTGIGAKHVCTRGVDAGDIFEAVRTEDVSYMCGAPTVLNMLVDYYEENDPETTGAN-DVR 283
Query: 306 ILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
I TAGS PP + E G+ + H YG TE + + + ++ + +R ++K R
Sbjct: 284 IATAGSAPPEATIRTVEDEFGWYLKHVYGATETGPLITTSDARRTFDD-DSSDRFAIKKR 342
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---G 421
QG+ +G T++ +VD E G V RD +T GEIV++G +M Y PE T + D G
Sbjct: 343 QGLGYLG-TDIRVVD-EDGNDVPRDDETIGEIVVQGNQVMEKYWNKPEETEEAFNDRLEG 400
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
Y+ GD+ + +G L I+DR KD+IISGGENISS E+E L+ HP V++ AV+ P
Sbjct: 401 YYHMGDLATVDENGMLSIQDRKKDIIISGGENISSIELEDTLFDHPEVSDVAVIPAPSDQ 460
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P AFV + + D T +++ + R + Y V + V F++ELP TATGK+QK
Sbjct: 461 WGETPKAFV-VPSNEDPDDPSVTADELVDFTRDNLAGYKVVREVEFVEELPTTATGKIQK 519
Query: 542 YVL 544
Y L
Sbjct: 520 YEL 522
>gi|336254825|ref|YP_004597932.1| o-succinylbenzoate--CoA ligase [Halopiger xanaduensis SH-6]
gi|335338814|gb|AEH38053.1| o-succinylbenzoate--CoA ligase [Halopiger xanaduensis SH-6]
Length = 535
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 186/546 (34%), Positives = 276/546 (50%), Gaps = 39/546 (7%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
PL F+E+A D +I+ D +T+ + R + A +L GI G V+V
Sbjct: 2 ETPLLVTDFLEQARRHYGDQEAIVGTDGERFTYDEFGDRVDRFARALQERGIGKGDRVAV 61
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+ PN E + GAI +N RL + + +L +E V+ D+ ++ + +
Sbjct: 62 LDPNTHYHLEAAYGAMSIGAIHAPLNYRLTSEDYAYMLADAEMDAVYADYEYAAKIEAI- 120
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDL 189
+ P +T+D + D+ D ++++L +P + +P+
Sbjct: 121 -----RDEVPTETFVTNDADAVE----------GDWED-FDDVLEAAEPDYE--QPEMAE 162
Query: 190 DPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D ++ +NYT GTT PKGV + ++ + A I + V LWTLPMFH NGW
Sbjct: 163 DEIITINYTSGTTGDPKGVCRTHRTETLHAYLVSIYHELTDGDVYLWTLPMFHVNGWGHI 222
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL------SSSPEAKQLDR 302
+ +GA +VC R +A V IR+ V+ +C AP VLN L PE D
Sbjct: 223 YAVTGLGAKHVCTRGVNADEVIETIREEDVSFLCAAPTVLNQLIDYYEREGEPEMTG-DN 281
Query: 303 PVRILTAGS-PPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASL 361
VR+ TAGS PP A + E G+ + H YG TE + P+ L A R S+
Sbjct: 282 DVRVTTAGSAPPEATIRAVEEEFGWRLKHLYGATETGPL---ITISPE-RLLEADNRFSM 337
Query: 362 KARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM--- 418
K RQG+ +G T+V +VD E G V RD +T GE+V+RG +M Y PEAT +
Sbjct: 338 KKRQGMGVLG-TDVRVVD-EDGEDVPRDDETLGEVVVRGNQVMDRYWNKPEATEEAFSER 395
Query: 419 KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRP 478
++G Y+TGD+ + G + I+DR KD+IISGGENISS E+E L+ H V +AAV+ P
Sbjct: 396 REGYYHTGDLATVDEHGLIAIRDRKKDIIISGGENISSIELEDTLFDHDAVADAAVIPAP 455
Query: 479 DPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGK 538
W E P AFV G D + ++ Q+ R R+ Y V + + +++ELPKTATGK
Sbjct: 456 SEEWGETPKAFVVPSNG-DPEDPPVSADELTQFTRDRLASYKVVRRIEYVEELPKTATGK 514
Query: 539 VQKYVL 544
+QKY L
Sbjct: 515 IQKYEL 520
>gi|448620996|ref|ZP_21668073.1| acyl-CoA synthetase [Haloferax denitrificans ATCC 35960]
gi|445756046|gb|EMA07422.1| acyl-CoA synthetase [Haloferax denitrificans ATCC 35960]
Length = 538
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 186/539 (34%), Positives = 271/539 (50%), Gaps = 38/539 (7%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
F++RA T D +++ D +T+++ R + +++L S G+ G V+V+ PN
Sbjct: 10 FLDRARTYYGDYEAVVGVDGERFTYAEFGERVDRFSAALQSRGVEKGDRVAVLDPNTHYH 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E F GA+ +N RL +L S + +V+ D+ + + V
Sbjct: 70 LEAAFGAMQCGALHVPLNYRLTTEDYEYLLSDSGASVVYADYQYAGKIEAV------RDD 123
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMV-LNY 196
P V +T+D P D++D +E L + D + RP+ D ++ +NY
Sbjct: 124 VPAEVFVTND----------PAAVDGDWLD-FEAFLDEADAD-DYERPEMSEDELITINY 171
Query: 197 TWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGA 256
T GTT PKGV + ++ + A I + V LWTLPMFH NGW + GA
Sbjct: 172 TSGTTGDPKGVCRTHRTESLHAQLVTIHHHIADDDVYLWTLPMFHVNGWGHIYAVTGRGA 231
Query: 257 TNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE----AKQLDRPVRILTAGSP 312
+VC R DA VF I V+ C AP VL++L E A D PVR+ AGS
Sbjct: 232 KHVCTRGVDAEQVFDAIATEDVSFFCCAPTVLSILREYAEEHDPAYAGDNPVRVTAAGSA 291
Query: 313 PPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE---RASLKARQGVR 368
P+ + TES G+ + YG TE + + N+L E R SLK RQGV
Sbjct: 292 APSATIRHTESEFGWEFTQLYGATETGPLIATS----DANRLIPDEGGLRFSLKQRQGVA 347
Query: 369 TIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYYT 425
+G T++ +VD + G V RD T GE+V+RG +M Y P+ T D G Y+T
Sbjct: 348 PLG-TDLRVVDDD-GERVPRDDATIGEVVVRGNQVMEKYWNKPDETHDAFNDRLEGWYHT 405
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+ +++ DG + I+DR KD+IISGGENISS E+E L+ H V + AV+ P W E
Sbjct: 406 GDLAVVNEDGMIAIQDRKKDIIISGGENISSVELEDALFDHDAVGDVAVIPAPSEKWGET 465
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P AFV G D T +++ +Y R R+ Y + F++E+PKTATGK+QKY L
Sbjct: 466 PKAFVVPANG-DVENPGVTAEELTEYTRDRLAGYKAIREFEFVEEIPKTATGKIQKYEL 523
>gi|453088980|gb|EMF17020.1| acetyl-CoA synthetase-like protein [Mycosphaerella populorum
SO2202]
Length = 603
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 188/563 (33%), Positives = 282/563 (50%), Gaps = 44/563 (7%)
Query: 14 LTPLGFIERAATACDDCPSIIYNDTT-----YTWSQTYRRCLQLASSLSSFGINPGHVVS 68
L+P F+ RAA + + ++ T+ +T R LA L G V
Sbjct: 50 LSPTFFLPRAAAIEPNAIASVHKTANGKMLRRTYQETADRARGLAYYLKKHGFKR---VG 106
Query: 69 VIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEV 128
++ N PA E + + + A+ IN RL I+ I H+E L+ VD E
Sbjct: 107 ILCTNTPAFLESIYGIGGAAAVNVAINYRLKMDDITYIFDHAEVDLIIVD-------AEF 159
Query: 129 VSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-S 187
L + K V D + + R+ E G+ ++ ++ + +
Sbjct: 160 RHLLDGYRKNHPNVPFIVDTDTDQGTGEFDRVVQQGL----EIDQQSGNQGWAGLQTEVA 215
Query: 188 DLDPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVV----PKQSV--LLWTLPMF 240
D D ++ L YT GTT+ PKGV +++ ++ A+ ++I+ + PK S LWTLPMF
Sbjct: 216 DEDSLIALAYTSGTTARPKGVEYTHRSAYLAALGNVIESNLNVAHPKASRAHYLWTLPMF 275
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H GW+F W + T+ CLRK D P ++ L+++ ++H AP V LL + A +L
Sbjct: 276 HAMGWTFPWAVTAIRGTHYCLRKIDYPYIWKLLKEEQLSHFNAAPTVNTLLLADSNAVKL 335
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
+ PVR+ A SPP A + + E +H YG TE G P+W++L +++ +
Sbjct: 336 EHPVRVTVAASPPTAHLFQQMEEHNLRPTHVYGLTETYGPITKGYQLPEWDRLETKQKYA 395
Query: 361 LKARQG--------VRTIGLTEVDIVD---PETGLSVKRDGQTRGEIVMRGGSLMLGYLK 409
ARQG R I + + ET V +DG+ GEI G GY K
Sbjct: 396 KMARQGHGFVTSLPARVIKTNQDESGSWGAAETIEDVAKDGKEIGEICFIGNICARGYYK 455
Query: 410 DPEATSKCMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMV 469
D AT K G ++GD+ + HPDG ++I DR+KD+IISGGENISS +E +L +HP +
Sbjct: 456 DAAATKKLFAGGVQHSGDLAVWHPDGAIQILDRAKDIIISGGENISSVALEGMLVTHPDI 515
Query: 470 NEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVF 527
EAA V D W E P AFV++K G T +DIIQ+ + + I R+MVPK +
Sbjct: 516 LEAACVAVQDKQWGERPKAFVTIKGGKKG----LTGEDIIQWAKNASGISRFMVPKEIEI 571
Query: 528 IDELPKTATGKVQKYVLGDIANS 550
+DELPKT+TGKV+K VL D A++
Sbjct: 572 LDELPKTSTGKVRKNVLRDWAHN 594
>gi|448361259|ref|ZP_21549880.1| AMP-dependent synthetase and ligase [Natrialba asiatica DSM 12278]
gi|445651069|gb|ELZ03979.1| AMP-dependent synthetase and ligase [Natrialba asiatica DSM 12278]
Length = 557
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 182/552 (32%), Positives = 279/552 (50%), Gaps = 33/552 (5%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ +T+++ R + AS L G+ G V+V+
Sbjct: 4 PLLVTDFLDRARRHYGDEEAVVATTGERFTYAELGARADRFASMLQDRGVEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL + + IL+ + +++ D+ + + V
Sbjct: 64 PNTHYQLEAAYGTMQLGAVHTPLNYRLTSEDYAYILEDAGVDVIYADYEFAEKVEAV--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVD-------TYENMLAKGDPQFSWVR 184
+ P IT+D + + + +D D +++++LA ++ R
Sbjct: 121 ---RDEVPTETFITNDVDAIGTEAGDAETSASDGSDATDEAWESFDDLLANATAEYD--R 175
Query: 185 PK-SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNN 243
P ++ D + +NYT GTT PKGV + ++ + A I V LWTLPMFH N
Sbjct: 176 PTMAEDDIITINYTSGTTGDPKGVCRTHRTETLHAYLISIHQDVTDDDTYLWTLPMFHVN 235
Query: 244 GWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL------SSSPEA 297
GW + +GA +VC R DA + IR+ V+++CGAP VLN+L +SSP
Sbjct: 236 GWGHIYAVTGMGAKHVCTRGVDAEWILETIREEDVSYLCGAPTVLNMLIDHYEDASSPPE 295
Query: 298 KQLDRPVRILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPAR 356
VRI TAGS PP + E G+ + H YG TE + + + ++ +
Sbjct: 296 TSGASDVRIATAGSAPPEATIRTVEDEFGWQLKHVYGATETGPLITTSDARRHFDA-DSD 354
Query: 357 ERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
R ++K RQG+ +G TEV +VD E G V RD T GE+V+RG +M Y PE T++
Sbjct: 355 GRFAIKKRQGLGFLG-TEVRVVD-EDGNDVPRDKTTIGEVVVRGNQVMEEYWNKPEVTAE 412
Query: 417 CMK---DGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAA 473
DG ++TGD+ + G + I+DR KD+IISGGENISS E+E L+ HP V A
Sbjct: 413 AFSDRLDGYFHTGDLATIDEHGMIAIQDRKKDIIISGGENISSIELEDALFDHPAVAAVA 472
Query: 474 VVGRPDPFWQEIPCAFVSLKTG-TDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELP 532
V+ P W E P AFV +G + G+ T E ++++ R + Y + V F+ +LP
Sbjct: 473 VIPSPSEQWGETPKAFVVPASGDVNDPGVSTDE--LVEFTRENLAGYKAVQRVEFVTQLP 530
Query: 533 KTATGKVQKYVL 544
TATGKVQKY L
Sbjct: 531 TTATGKVQKYEL 542
>gi|448605848|ref|ZP_21658441.1| acyl-CoA synthetase [Haloferax sulfurifontis ATCC BAA-897]
gi|445741171|gb|ELZ92675.1| acyl-CoA synthetase [Haloferax sulfurifontis ATCC BAA-897]
Length = 540
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 185/543 (34%), Positives = 281/543 (51%), Gaps = 32/543 (5%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ +T+ + R +++L S G+ G V+V+
Sbjct: 4 PLLVTEFLDRARRYYGDEEAVVATTGERFTYDELGERADGFSAALQSRGVEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL +L ++ V+ D+ + + EV
Sbjct: 64 PNTHYHLEAAYGSMQLGAVHMPLNYRLVPADFEYMLNDADVTAVYADYAFAEKIDEV--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
+ P + IT+D E ++ S+ +++D ++ ++A+ + RP+ D D
Sbjct: 121 ---RDEIPTEIFITNDPEKAAESTD------GEWLD-FDELVAE---STDYERPEMDEDD 167
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
+V +NYT GTT PKGV + ++A I A + + V LWTLPMFH NGW +
Sbjct: 168 IVTINYTSGTTGDPKGVCRTHRAETIHAYLISMHQDIADDDVYLWTLPMFHVNGWGHIYA 227
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAKQLD----RPVR 305
GA +VC R +A V IR V+++C AP VLN L+ E ++ PVR
Sbjct: 228 ITGHGAKHVCTRGVEAEAVLDAIRDEDVSYLCAAPTVLNILMKHYREEGGIETTGASPVR 287
Query: 306 ILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
TAG+ PP + E G+ + H YG TE G ++ + ++ +R +K +
Sbjct: 288 AATAGAAPPEATIRTVEDEFGWRLMHVYGATE-TGPLITTSEAGRY-LTDGDDRFGVKKK 345
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK---DG 421
QG+ +G T+V +VD E G V RD Q+ GEIV+ G +M Y PE T + +G
Sbjct: 346 QGIGYLG-TDVRVVD-EDGDDVPRDDQSVGEIVVAGNQVMEKYWNKPEETEEAFSARLEG 403
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
Y+ GD+ ++ +G++ I+DR KD+IISGGENISS E+E L+ H V + AV+ P
Sbjct: 404 YYHMGDLAVVDENGFISIQDRKKDIIISGGENISSIELEDTLFDHDAVADVAVIPVPSDE 463
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P AFV +G +T E +I +CR RI Y VPK V F+ ELPKTATGK+QK
Sbjct: 464 WGESPKAFVVPTSGDPDAPGVTAEA-LIAFCRERIATYKVPKEVEFVAELPKTATGKIQK 522
Query: 542 YVL 544
Y L
Sbjct: 523 YEL 525
>gi|448608048|ref|ZP_21659887.1| acyl-CoA synthetase [Haloferax sulfurifontis ATCC BAA-897]
gi|445737090|gb|ELZ88628.1| acyl-CoA synthetase [Haloferax sulfurifontis ATCC BAA-897]
Length = 538
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 186/539 (34%), Positives = 271/539 (50%), Gaps = 38/539 (7%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
F++RA T D +++ D +T+++ R + +++L S G+ G V+V+ PN
Sbjct: 10 FLDRARTYYGDYEAVVGVDGERFTYAEFGERVDRFSAALQSRGVEKGDRVAVLDPNTHYH 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E + GA+ +N RL +L S + +V+ D+ + + V
Sbjct: 70 LEAAYGSMQCGALHVPLNYRLTTEDYEYLLSDSGASVVYADYQYAGKIEAV------RDD 123
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMV-LNY 196
P V +T+D P D++D +E L + D + RP+ D ++ +NY
Sbjct: 124 VPAEVFVTND----------PAAVDGDWLD-FETFLDEADAD-DYERPEMSEDELITINY 171
Query: 197 TWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGA 256
T GTT PKGV + ++ + A I + V LWTLPMFH NGW + GA
Sbjct: 172 TSGTTGDPKGVCRTHRTESLHAQLVTIHHHIADDDVYLWTLPMFHVNGWGHIYAVTGRGA 231
Query: 257 TNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE----AKQLDRPVRILTAGSP 312
+VC R DA VF I V+ C AP VL++L E A D PVR+ AGS
Sbjct: 232 KHVCTRGVDAERVFDAITGEDVSFFCCAPTVLSILREYAEEHDPAYAGDNPVRVTAAGSA 291
Query: 313 PPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE---RASLKARQGVR 368
P+ + TES G+ + YG TE + + N+L E R SLK RQGV
Sbjct: 292 APSATIRHTESEFGWEFTQLYGATETGPLIATS----DANRLIPDEGGLRFSLKQRQGVA 347
Query: 369 TIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYYT 425
+G T++ +VD + G V RD T GE+V+RG +M Y P+ T D G Y+T
Sbjct: 348 PLG-TDLRVVDDD-GEQVPRDDATIGEVVVRGNQVMEKYWNKPDETHDAFNDRLEGWYHT 405
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+ +++ DG + I+DR KD+IISGGENISS E+E L+ H V + AV+ P W E
Sbjct: 406 GDLAVVNEDGMIAIQDRKKDIIISGGENISSVELEDALFDHDAVGDVAVIPAPSEKWGET 465
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P AFV G D T +D+ +Y R R+ Y + F++E+PKTATGK+QKY L
Sbjct: 466 PKAFVVPANG-DVENPGVTAEDLTEYTRDRLAGYKAIREFEFVEEIPKTATGKIQKYEL 523
>gi|284167252|ref|YP_003405530.1| AMP-dependent synthetase and ligase [Haloterrigena turkmenica DSM
5511]
gi|284016907|gb|ADB62857.1| AMP-dependent synthetase and ligase [Haloterrigena turkmenica DSM
5511]
Length = 540
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 183/544 (33%), Positives = 273/544 (50%), Gaps = 30/544 (5%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
PL F++RA D +++ YT+ R +L++ L GI G V+V
Sbjct: 2 EVPLLVTDFLDRARKYYGDEEAVVATTGERYTYDDLGDRADRLSAVLRERGIEKGDRVAV 61
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+ PN E + + GAI +N RL + +L + V D+ + + V
Sbjct: 62 LDPNTHYHLESAYGIMQLGAIHTPLNYRLTSEDYEYMLDDAGVDAVIADYEYAERIDAVR 121
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SD 188
P + + TD ++ + +E ++ P++ RP+ S+
Sbjct: 122 DEVPTET-----FIATDADALNGCDGE---------WEDFETLIDDASPEYD--RPEMSE 165
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + +NYT GTT PKGV++ ++ + A I + V LWTLPMFH NGW
Sbjct: 166 DDVITINYTSGTTGDPKGVMRTHRTEALHAQLVTIHHEITDDDVYLWTLPMFHVNGWGHI 225
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL----DRPV 304
+ +GA +VC R DA T IR+ V+ +C AP VL L + + D P+
Sbjct: 226 YAITGIGAKHVCTRGVDAETNLRQIREEDVSFLCCAPTVLTLFEEYLMDEDVPTTGDAPM 285
Query: 305 RILTAGSPPPAPVLLRT-ESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
R+ AG+ PP ++ E G+ YG TE + + A + ++ A ER +LK
Sbjct: 286 RVTAAGAAPPESIIETVEEEFGWHFRQLYGATETGPLIGTSATRRLIDEDSA-ERFALKK 344
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR- 422
RQG+ + TEV++VD + G V D +T GEIV+RG +M GY + PE T + D R
Sbjct: 345 RQGIAPLA-TEVEVVD-DDGEEVPWDDETIGEIVVRGNQVMDGYWEKPEETEESFDDKRE 402
Query: 423 --YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
++TGD+ +++ DG + I+DR KD+I+SGGENISS E+E VL+ HP V + A++ P
Sbjct: 403 GWFHTGDLAVVNEDGLMAIQDRKKDIIVSGGENISSIELEDVLFDHPDVADVAIIPTPSE 462
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E P AFV +G D T+ D+ Y R R+ Y V V F+DELPKTATGK Q
Sbjct: 463 KWGETPKAFVVPASG-DPENPPVTKDDLTAYTRERLAGYKVVHRVEFVDELPKTATGKTQ 521
Query: 541 KYVL 544
KY L
Sbjct: 522 KYEL 525
>gi|448625228|ref|ZP_21670995.1| acyl-CoA synthetase [Haloferax denitrificans ATCC 35960]
gi|445748990|gb|EMA00436.1| acyl-CoA synthetase [Haloferax denitrificans ATCC 35960]
Length = 540
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 182/543 (33%), Positives = 282/543 (51%), Gaps = 32/543 (5%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ +T+ + R +++L S G+ G V+V+
Sbjct: 4 PLLVTEFLDRARRYYGDEEAVVATTGERFTYDELGERADGFSAALQSRGVEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL +L ++ V+ D+ + + EV
Sbjct: 64 PNTHYHLEAAYGSMQLGAVHMPLNYRLVPADFEYMLNDADVTAVYADYAFAEKIDEV--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
+ P + +T+D E ++ S+ +++D ++ ++A+ + RP+ D D
Sbjct: 121 ---RDEIPTEIFVTNDPEKAAESTD------GEWLD-FDELVAE---STDYERPEMDEDD 167
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++A I A + + V LWTLPMFH NGW +
Sbjct: 168 IITINYTSGTTGDPKGVCRTHRAETIHAYLISMHQDIADDDVYLWTLPMFHVNGWGHIYA 227
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAKQLD----RPVR 305
GA +VC R +A V IR V+++C AP VLN L+ E ++ PVR
Sbjct: 228 ITGHGAKHVCTRGVEAEAVLDAIRDEDVSYLCAAPTVLNILMKHYREEGGVETTGASPVR 287
Query: 306 ILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
TAG+ PP + E G+ + H YG TE G ++ + ++ +R +K +
Sbjct: 288 AATAGAAPPEATIRTVEDEFGWRLMHVYGATE-TGPLITTSEAGRY-LTDGDDRFGVKKK 345
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK---DG 421
QG+ +G T+V +VD E G V RD Q+ GEIV+ G +M Y PE T + +G
Sbjct: 346 QGIGYLG-TDVRVVD-EDGDDVPRDDQSVGEIVVAGNQVMEKYWNKPEETEEAFSARLEG 403
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
Y+ GD+ ++ +G++ I+DR KD+IISGGENISS E+E L+ H V + AV+ P
Sbjct: 404 YYHMGDLAVVDENGFISIQDRKKDIIISGGENISSIELEDTLFDHDAVADVAVIPVPSDE 463
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P AFV + T D T + +I++CR RI Y VPK + F+ ELPKTATGK+QK
Sbjct: 464 WGESPKAFV-VPTSGDPDAPGVTGQALIEFCRGRIATYKVPKEIEFVAELPKTATGKIQK 522
Query: 542 YVL 544
Y L
Sbjct: 523 YEL 525
>gi|448501370|ref|ZP_21612160.1| AMP-dependent synthetase and ligase [Halorubrum coriense DSM 10284]
gi|445695162|gb|ELZ47272.1| AMP-dependent synthetase and ligase [Halorubrum coriense DSM 10284]
Length = 538
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 181/542 (33%), Positives = 271/542 (50%), Gaps = 32/542 (5%)
Query: 13 PLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ D T YT+++ R + +++L + G+ G V+V+
Sbjct: 4 PLLTTDFLDRARRHYADEEAVLAVDGTRYTYAELGERADRFSAALQARGVEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GAI +N RL S +L + ++ D ++ + +
Sbjct: 64 PNTHYHLEAAYGAMQVGAIHAPLNYRLTPSDFSYMLSDAGVDAIYADAEYAANVEAIRDE 123
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P + L D + D YE RP+ D D
Sbjct: 124 VPTET-----FLTNDADAVEGDWESFDAALDDADPDAYE-------------RPEMDEDE 165
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++A + A I + V LWTLPMFH NGW +
Sbjct: 166 VITINYTSGTTGDPKGVCRTHRAETLHAYLISIHQEITDDDVYLWTLPMFHVNGWGHIYA 225
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL----SSSPEAKQLDRPVRI 306
GA +VC R D F IR V++ C AP VLN+L + A D VR+
Sbjct: 226 ITGAGARHVCTRGVDVAETFDRIRGEDVSYFCAAPTVLNMLGDHYADRGGATAGDNDVRV 285
Query: 307 LTAGS-PPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQ 365
TAG+ PP A + E G+ + H YG TE G ++ + + + + +R ++K Q
Sbjct: 286 ATAGAAPPEATIRTVEEEFGWDLKHVYGATET-GPLITTSDAKRHFEADSDDRFAVKKTQ 344
Query: 366 GVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GR 422
G+ +G T+V +VD E G V DG+T GEIV+RG +M Y PEAT + + G
Sbjct: 345 GIGYLG-TDVRVVD-ENGEDVAADGETIGEIVVRGNQVMDRYWNKPEATEQAFSERLEGY 402
Query: 423 YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFW 482
Y+ GD+ ++ DG++ I+DR KD+IISGGENISS E+E L+ H +V++ AV+ PD W
Sbjct: 403 YHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDTLFEHDVVSDVAVIPAPDERW 462
Query: 483 QEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKY 542
E P AFV ++G D T +++ + R R+ Y P V F+ +LP TATGK+QKY
Sbjct: 463 GETPKAFVVPESG-DPDDAGATPEELRAFVRERVADYKTPGEVEFVAKLPTTATGKIQKY 521
Query: 543 VL 544
L
Sbjct: 522 EL 523
>gi|448728405|ref|ZP_21710733.1| AMP-dependent synthetase and ligase [Halococcus saccharolyticus DSM
5350]
gi|445796887|gb|EMA47372.1| AMP-dependent synthetase and ligase [Halococcus saccharolyticus DSM
5350]
Length = 532
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 190/537 (35%), Positives = 277/537 (51%), Gaps = 40/537 (7%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
F++RA DD ++ +D T YT+++ +R +++++L G+ G V++++PN
Sbjct: 10 FLDRAVECYDDAVGVVAHDGTEYTYAEFEKRVNRVSNALLEMGVEQGDRVALLSPNTHYF 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E + V G +F +N L IL E+ +V D+ + + V P +
Sbjct: 70 LETLYGVNQIGGVFVPMNYLLTPDDFEYILNDCEAGVVIADYDYAENVEAVRDSVPAEAF 129
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SDLDPMVLNY 196
+ DD + D+ D YE LA RP+ ++ D +NY
Sbjct: 130 ---VGYEADDID-------------GDWTD-YEAWLADASTDAP-ERPEIAEDDDASINY 171
Query: 197 TWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGA 256
T GTT PKGVV+ ++ A+ V LWTLPMFH NGW T+ +G
Sbjct: 172 TSGTTGDPKGVVRTHRTEHWHALVLNQHMEVADDDTYLWTLPMFHCNGWGHTYAITGMGG 231
Query: 257 TNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL----SSSPEAKQL-DRPVRILTAGS 311
T+VC R F+ +R+H V+++ GAP VLN L +P+A + DR VRI TAGS
Sbjct: 232 THVCQRTFEPEGTLRRVREHDVSYLSGAPTVLNRLIVHYDENPDAVTMGDRDVRISTAGS 291
Query: 312 PPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKARQGVRTI 370
P L E +G+ + H YG TE A + ++ + P+ +L R R LK QG I
Sbjct: 292 APATATLQTVEDEIGWRIIHLYGLTETAPM-ITTSNSPR--RLAERGR-DLKVNQGAEMI 347
Query: 371 GLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYYTGD 427
T+V +VD + G V DG+T GEIV+ G +M YL PE T + G ++TGD
Sbjct: 348 A-TDVRVVDDD-GEDVTADGETLGEIVVAGNQVMDRYLNKPEITEEAFNAKLPGYFHTGD 405
Query: 428 VGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEIPC 487
+ + DG + I+DR KD+IISGGEN+SS +E VLY HP + +AAV+ P W E
Sbjct: 406 LATIDEDGMVSIQDREKDIIISGGENVSSIAVEDVLYDHPDIAKAAVIPTPSDEWGEAVT 465
Query: 488 AFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
A V K D +TTE + ++ + RY VPK V F+D+LP+TATGKVQKY L
Sbjct: 466 ALVVQKADAD----LTTEA-VREFAGEHLARYKVPKKVDFVDDLPETATGKVQKYQL 517
>gi|433420533|ref|ZP_20405541.1| acyl-CoA synthetase [Haloferax sp. BAB2207]
gi|432199135|gb|ELK55342.1| acyl-CoA synthetase [Haloferax sp. BAB2207]
Length = 538
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 187/540 (34%), Positives = 274/540 (50%), Gaps = 40/540 (7%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
F++RA T D +++ D +T+++ +R + +++L S G+ G V+V+ PN
Sbjct: 10 FLDRARTYYGDYEAVVGIDGERFTYAEFGQRVDRFSAALQSRGVEKGDRVAVLDPNTHYH 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E F GA+ +N RL +L S + +V+ D+ + + V
Sbjct: 70 LEAAFGAMQCGALHVPLNYRLTTDDYEYLLSDSGATVVYADYQYAGKIEAV------RDD 123
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMV-LNY 196
P V +T+D P D++D +E L + D + RP+ D ++ +NY
Sbjct: 124 VPAEVFVTND----------PAAVDGDWLD-FEAFLDEADAD-DYERPEMSEDELITINY 171
Query: 197 TWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGA 256
T GTT PKGV + ++ + A I + V LWTLPMFH NGW + GA
Sbjct: 172 TSGTTGDPKGVCRTHRTESLHAQLVTIHHHIADDDVYLWTLPMFHVNGWGHIYAVTGRGA 231
Query: 257 TNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE----AKQLDRPVRILTAGSP 312
+VC R DA VF I + V+ C AP VL++L E A D PVR+ AGS
Sbjct: 232 KHVCTRGVDAEQVFDAITEEDVSFFCCAPTVLSILREHAEEHDPAYAGDNPVRVTAAGSA 291
Query: 313 PPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE---RASLKARQGVR 368
P+ + TES G+ + YG TE + + N+L E R SLK RQGV
Sbjct: 292 APSATIRHTESEFGWEFTQLYGATETGPLIATS----DANRLIPDEGGLRFSLKQRQGVA 347
Query: 369 TIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYYT 425
+G T++ +VD + G V RD T GE+V+RG +M Y P+ T D G Y+T
Sbjct: 348 PLG-TDLRVVDDD-GEQVPRDDATIGEVVVRGNQVMEKYWNKPDETHDAFNDRLEGWYHT 405
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+ +++ DG + I+DR KD+IISGGENISS E+E L+ H V + AV+ P W E
Sbjct: 406 GDLAVVNEDGMIAIQDRKKDIIISGGENISSVELEDALFDHDAVGDVAVIPAPSEKWGET 465
Query: 486 PCAFVSLKTGT-DSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P AFV G D+ G+ T +++ Y R R+ Y + F+ E+PKTATGK+QKY L
Sbjct: 466 PKAFVVPANGDPDAPGV--TAEELTAYTRDRLAGYKAIREFEFVAEIPKTATGKIQKYEL 523
>gi|448319894|ref|ZP_21509382.1| AMP-dependent synthetase and ligase [Natronococcus amylolyticus DSM
10524]
gi|445606300|gb|ELY60204.1| AMP-dependent synthetase and ligase [Natronococcus amylolyticus DSM
10524]
Length = 540
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 182/547 (33%), Positives = 276/547 (50%), Gaps = 30/547 (5%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
PL F++RA D +++ YT++ R +L++ L G+ G V+V
Sbjct: 2 EVPLLVTDFLDRARKYYGDEEAVVATTGERYTYNGFGDRADRLSAVLQERGVAKGDRVAV 61
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+ PN E + + GAI +N RL + +L + V D+ + + V+
Sbjct: 62 LDPNTHYHLESAYGIMQLGAIHTPLNYRLTPDDYAYMLNDAGVDAVVADYEYAHKIDAVL 121
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK-SD 188
P + + TD + +++D +E ++A+ D + RP+ S+
Sbjct: 122 DEVPTET-----FIATDADALEDCD--------GEWLD-FEELIAEADADYD--RPEMSE 165
Query: 189 LDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D + +NYT GTT PKGV++ ++ + A I + V LWTLPMFH NGW
Sbjct: 166 DDVITINYTSGTTGDPKGVMRTHRTESLHAQLVTIHHEISDDDVYLWTLPMFHVNGWGHI 225
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL----DRPV 304
+ +GA +VC R DA IR+ V+ +C AP VL L E + D P+
Sbjct: 226 YAITGMGAKHVCTRGADAEANLRQIREEDVSFLCCAPTVLTLFEEYLEEADVPTTGDAPM 285
Query: 305 RILTAGSPPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKA 363
R+ AG+ PP ++ E+ G+ YG TE G + + + + ER +LK
Sbjct: 286 RVTAAGAAPPESIIETVETEFGWHFRQLYGATE-TGPLIGTSATRRLIDEESEERFALKK 344
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKDGR- 422
RQG+ + TEV++VD + G V D +T GEIV+RG +M GY + PE T + D R
Sbjct: 345 RQGIAPLA-TEVEVVD-DDGTEVPWDDETIGEIVVRGNQVMDGYWEKPEETEEAFDDKRE 402
Query: 423 --YYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
++TGD+ +++ DG + I+DR KD+I+SGGENISS E+E L+ HP V + A++ P
Sbjct: 403 GWFHTGDLAVVNEDGLMAIQDRKKDIIVSGGENISSIELEDTLFDHPDVADVAIIPAPSE 462
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E P AFV G D T D+ Y R R+ Y V V F+DELPKTATGK+Q
Sbjct: 463 KWGETPKAFVVPANG-DPENPPVTADDLTAYTRERLAGYKVVHRVEFVDELPKTATGKIQ 521
Query: 541 KYVLGDI 547
KY L ++
Sbjct: 522 KYELREL 528
>gi|383621159|ref|ZP_09947565.1| o-succinylbenzoate--CoA ligase [Halobiforma lacisalsi AJ5]
Length = 536
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 182/547 (33%), Positives = 272/547 (49%), Gaps = 40/547 (7%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
PL F+E+A D +++ D +T+++ R + A++L GI G V+V
Sbjct: 2 ETPLIVTDFLEQARNHYADEEAVVGADGDRFTYAELGDRVDRFAAALQERGIEKGDRVAV 61
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+ PN E + GA+F +N RL + IL + ++ D+ + + E+
Sbjct: 62 LDPNTHYHLEAAYGAMSIGAVFTPLNYRLTSDDYEYILSDAGVDAIYADYEYAEKVEEI- 120
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDL 189
P IT+D E ++++ ++ DP + P+
Sbjct: 121 -----RDDVPTETFITNDTERVDGE-----------WESFDVAISDTDPDYD--EPEMAE 162
Query: 190 DPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFT 248
D ++ +NYT GTT PKGV + ++ I A I + LWTLPMFH NGW
Sbjct: 163 DEIITINYTSGTTGDPKGVCRTHRTETIHAYLMSIYHEITSDDTYLWTLPMFHVNGWGHI 222
Query: 249 WGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL------SSSPEAKQLDR 302
+ +GAT+VC R +A V IR+ V+ +C AP VLN L + PE ++
Sbjct: 223 YAVTGMGATHVCTRGVNADEVVDAIREEDVSFLCAAPAVLNQLIDYYENNDQPEMSGANQ 282
Query: 303 PVRILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAG-VNVSCAWKPKWNKLPARERAS 360
VR+ TAGS PP + E G+ + H YG TE + +S A + + R
Sbjct: 283 -VRVTTAGSAPPEATIRAVEDEFGWYLKHLYGATETGPLITISDAKR----LIDDENRFE 337
Query: 361 LKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD 420
+K RQG+ +G TEV +VD E G V +D +T GE+V+RG +M Y PE T + D
Sbjct: 338 IKKRQGMGVLG-TEVRVVD-EDGNDVPQDDETLGEVVVRGNQVMDHYWNKPEQTEEAFND 395
Query: 421 ---GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G Y+ GD+ + +G + ++DR KD+IISGGENISS E+E L+ H V +AAV+
Sbjct: 396 RVEGYYHMGDLATVDENGMIALRDRKKDIIISGGENISSIELEDTLFDHDAVADAAVIPA 455
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATG 537
P W E P AFV G D+ + +++ Y R R+ Y V + V F++ELPKTATG
Sbjct: 456 PSEEWGETPKAFVVPSNG-DAENPPVSAEELTDYTRERLASYKVVRRVEFVEELPKTATG 514
Query: 538 KVQKYVL 544
K QKY L
Sbjct: 515 KTQKYEL 521
>gi|448541763|ref|ZP_21624387.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-646]
gi|448549939|ref|ZP_21628544.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-645]
gi|448554950|ref|ZP_21630990.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-644]
gi|445707642|gb|ELZ59495.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-646]
gi|445712987|gb|ELZ64768.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-645]
gi|445717695|gb|ELZ69398.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-644]
Length = 540
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 182/543 (33%), Positives = 281/543 (51%), Gaps = 32/543 (5%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ +T+ + R +++L S G+ G V+V+
Sbjct: 4 PLLVTEFLDRARRYYGDREAVVATTGERFTYDEVGERADGFSAALQSRGVEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL +L ++ V+ D+ + + EV
Sbjct: 64 PNTHYHLEAAYGSMQLGAVHMPLNYRLVPADFEYMLNDADVTAVYADYAFAEKIDEV--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
+ P + +T+D E ++ S+ +++D ++ ++A+ + RP+ D D
Sbjct: 121 ---RDEIPAEIFVTNDPEKAAESTD------GEWLD-FDELVAE---STDYERPEMDEDD 167
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++A I A + + V LWTLPMFH NGW +
Sbjct: 168 IITINYTSGTTGDPKGVCRTHRAETIHAYLISMHQDIADDDVYLWTLPMFHVNGWGHIYA 227
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAKQLD----RPVR 305
GA +VC R +A V IR V+++C AP VLN L+ E ++ PVR
Sbjct: 228 ITGHGAKHVCTRGVEAEAVLDAIRDEDVSYLCAAPTVLNILMKHYREEGGVETTGASPVR 287
Query: 306 ILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
TAG+ PP + E G+ + H YG TE G ++ + ++ +R +K +
Sbjct: 288 AATAGAAPPEATIRTVEDEFGWRLMHVYGATE-TGPLITTSEAGRY-LTDGDDRFGVKKK 345
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK---DG 421
QG+ +G T+V +VD E G V RD Q+ GEIV+ G +M Y PE T + +G
Sbjct: 346 QGIGYLG-TDVRVVD-EDGNDVPRDDQSVGEIVVAGNQVMEKYWNKPEETEEAFSARLEG 403
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
Y+ GD+ ++ +G++ I+DR KD+IISGGENISS E+E L+ H V + AV+ P
Sbjct: 404 YYHMGDLAVVDENGFISIQDRKKDIIISGGENISSIELEDTLFDHDAVADVAVIPVPSDE 463
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P AFV +G +T E +I +CR RI Y VPK + F+ ELPKTATGK+QK
Sbjct: 464 WGESPKAFVVPTSGDPDAPGVTAEA-LIAFCRERIATYKVPKEIEFVAELPKTATGKIQK 522
Query: 542 YVL 544
Y L
Sbjct: 523 YEL 525
>gi|448572758|ref|ZP_21640519.1| acyl-CoA synthetase [Haloferax lucentense DSM 14919]
gi|445719530|gb|ELZ71209.1| acyl-CoA synthetase [Haloferax lucentense DSM 14919]
Length = 538
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 187/540 (34%), Positives = 274/540 (50%), Gaps = 40/540 (7%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
F++RA T D +++ D +T+++ +R + +++L S G+ G V+V+ PN
Sbjct: 10 FLDRARTYYGDYEAVVGIDGERFTYAEFGQRVDRFSAALQSRGVEKGDRVAVLDPNTHYH 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E F GA+ +N RL +L S + +V+ D+ + + V
Sbjct: 70 LEAAFGAMQCGALHVPLNYRLTTDDYEYLLSDSGATVVYADYQYAGKIEAV------RDD 123
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMV-LNY 196
P V +T+D P D++D +E L + D + RP+ D ++ +NY
Sbjct: 124 VPAEVFVTND----------PAAVNGDWLD-FEAFLDEADAD-DYERPEMSEDELITINY 171
Query: 197 TWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGA 256
T GTT PKGV + ++ + A I + V LWTLPMFH NGW + GA
Sbjct: 172 TSGTTGDPKGVCRTHRTESLHAQLVTIHHHIADDDVYLWTLPMFHVNGWGHIYAVTGRGA 231
Query: 257 TNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE----AKQLDRPVRILTAGSP 312
+VC R DA VF I + V+ C AP VL++L E A D PVR+ AGS
Sbjct: 232 KHVCTRGVDAEQVFDAITEEDVSFFCCAPTVLSILREYAEEHDPAYAGDNPVRVTAAGSA 291
Query: 313 PPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE---RASLKARQGVR 368
P+ + TES G+ + YG TE + + N+L E R SLK RQGV
Sbjct: 292 APSATIRHTESEFGWEFTQLYGATETGPLIATS----DANRLIPDEGGLRFSLKQRQGVA 347
Query: 369 TIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYYT 425
+G T++ +VD + G V RD T GE+V+RG +M Y P+ T D G Y+T
Sbjct: 348 PLG-TDLRVVDDD-GEQVPRDDATIGEVVVRGNQVMEKYWNKPDETHDAFNDRLEGWYHT 405
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+ +++ DG + I+DR KD+IISGGENISS E+E L+ H V + AV+ P W E
Sbjct: 406 GDLAVVNEDGMIAIQDRKKDIIISGGENISSVELEDALFDHDAVGDVAVIPAPSEKWGET 465
Query: 486 PCAFVSLKTGT-DSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P AFV G D+ G+ T +++ Y R R+ Y + F+ E+PKTATGK+QKY L
Sbjct: 466 PKAFVVPANGDPDAPGV--TAEELTAYTRDRLAGYKAIREFEFVAEIPKTATGKIQKYEL 523
>gi|448311497|ref|ZP_21501258.1| AMP-dependent synthetase and ligase [Natronolimnobius
innermongolicus JCM 12255]
gi|445604828|gb|ELY58770.1| AMP-dependent synthetase and ligase [Natronolimnobius
innermongolicus JCM 12255]
Length = 537
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 182/548 (33%), Positives = 278/548 (50%), Gaps = 41/548 (7%)
Query: 11 SCPLTPLGFIERAATACDDCPSIIY-NDTTYTWSQTYRRCLQLASSLSSFGINPGHVVSV 69
PL F++RA D +I+ + +T+ + R +L++ L GI G V+V
Sbjct: 2 EVPLLVTDFLDRARKYYGDEEAIVATSGERFTYEEFGNRADRLSTVLQERGIEKGDRVAV 61
Query: 70 IAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVV 129
+ PN E + + GAI +N RL +L S +K + D +
Sbjct: 62 LDPNTHYQLESAYGIMQLGAIHTPLNYRLTPEDYEYLLSDSGAKAIIADSEYAD------ 115
Query: 130 SLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDT----YENMLAKGDPQFSWVRP 185
+ P + P + IT+D D VD +++++ +P++ RP
Sbjct: 116 KIEPIRDEVPTEIFITND---------------VDDVDGDWEGFDDLIDGLEPEYD--RP 158
Query: 186 K-SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNG 244
+ S+ D + +NYT GTT PKGV++ ++ + A I + V LWTLPMFH NG
Sbjct: 159 EMSEDDVITINYTSGTTGDPKGVMRTHRTESLHAQLVTIHHEIRDDDVYLWTLPMFHVNG 218
Query: 245 WSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL---- 300
W + +GA +VC R DA +F I V+ +C AP VL++L E +
Sbjct: 219 WGHIYAITGMGAKHVCTRGVDAAEIFRQIVDEDVSFLCCAPTVLSMLGEYYEEHDVQTDG 278
Query: 301 DRPVRILTAGSPPPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERA 359
D P+R+ AG+ PP V+ E G+ YG TE G + + + + +R
Sbjct: 279 DNPMRVTAAGAAPPEAVIETVEEEFGWHFRQLYGATE-TGPLIGTSATRRLIDEDSDDRF 337
Query: 360 SLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCM- 418
+LK RQG+ + TEV +VD E G V D +T GEI++RG +M GY + P+AT +
Sbjct: 338 ALKKRQGIAPLA-TEVAVVD-EDGTEVPWDDETIGEILVRGNQVMEGYWEKPDATEEAFT 395
Query: 419 --KDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
+DG ++TGD+ +++ DG L I+DR KD+IISGGENISS E+E L+ HP V++ AV+
Sbjct: 396 EKRDGWFHTGDLAVVNEDGMLSIQDREKDIIISGGENISSIELEDTLFDHPAVSDVAVIP 455
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTAT 536
P W E P AFV + + + + ++ + R R+ Y V V F+DELP TAT
Sbjct: 456 APSDQWGETPKAFV-VPSNENPDDPPVSADELTAFTRERLAGYKVVHRVEFVDELPTTAT 514
Query: 537 GKVQKYVL 544
GK+QKY L
Sbjct: 515 GKIQKYEL 522
>gi|448390206|ref|ZP_21565986.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
gi|445667534|gb|ELZ20176.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
Length = 553
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 190/557 (34%), Positives = 278/557 (49%), Gaps = 47/557 (8%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ YT+ + R + +++L GI G V+V+
Sbjct: 4 PLLVTDFLDRARKHYGDEEAVVATTGERYTYDELGERADRFSAALQERGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL S +L+ +E ++ D+ V +
Sbjct: 64 PNTHYHLEAAYGSMQLGAVHTPLNYRLTPEDFSYMLEDAEVDAIYADYEY------VDKI 117
Query: 132 FPPHSKTPKLVLITDDK---------EISSSSSPPPRIPPADFVDTYENMLAKGDPQFSW 182
P + P IT+D E SSS + +F E D +
Sbjct: 118 EPIRDEVPTETFITNDADAVEGGEAGEAGRSSSDSSDVEWEEFDAVLE------DAGTEY 171
Query: 183 VRPKSDLDPMV-LNYTWGTTSAPKGVVQCYK-----AFFIIAVDSLIDWVVPKQSVLLWT 236
RP+ D ++ +NYT GTT PKGV + ++ A+ I A L D V LWT
Sbjct: 172 DRPEMSEDEIITMNYTSGTTGDPKGVCRTHRSETLHAYLITAHQELRD-----DDVYLWT 226
Query: 237 LPMFHNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLL----- 291
LPMFH NGW + +GA +VC R DA +F ++ V++MCGAP VLNLL
Sbjct: 227 LPMFHVNGWGHIYAVTGIGAKHVCTRGVDAGDIFEAVQTEDVSYMCGAPTVLNLLIDYYE 286
Query: 292 SSSPEAKQLDRPVRILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKW 350
+ PE + VRI TAGS PP + E G+ + H YG TE + + + +
Sbjct: 287 ENDPETTG-ENGVRIATAGSAPPEATIRTVEDEFGWYLKHVYGATETGPLITTSDARRTF 345
Query: 351 NKLPARERASLKARQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKD 410
+ + +R ++K RQG+ +G TE+ +VD E G V RD + GEIV+RG +M Y
Sbjct: 346 DDDDS-DRFAIKKRQGLGYLG-TEIRVVD-EDGNDVPRDDASIGEIVVRGNQVMEKYWNK 402
Query: 411 PEATSKCMKD---GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHP 467
P+AT + D G Y+TGD+ ++ G + I+DR KD+IISGGENISS E+E L+ HP
Sbjct: 403 PDATEEAFNDRVEGYYHTGDLAVVDEHGMISIQDRKKDIIISGGENISSIELEDTLFDHP 462
Query: 468 MVNEAAVVGRPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVF 527
V++ AV+ P W E P AFV G D T +++ + R + Y V + V F
Sbjct: 463 EVSDVAVIPAPSDEWGETPKAFVVPGNG-DPDDPSVTRDELVDFTRDNLAGYKVVREVEF 521
Query: 528 IDELPKTATGKVQKYVL 544
++ELP TATGK+QKY L
Sbjct: 522 VEELPTTATGKIQKYEL 538
>gi|448598622|ref|ZP_21655049.1| acyl-CoA synthetase [Haloferax alexandrinus JCM 10717]
gi|445738160|gb|ELZ89686.1| acyl-CoA synthetase [Haloferax alexandrinus JCM 10717]
Length = 538
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 186/539 (34%), Positives = 270/539 (50%), Gaps = 38/539 (7%)
Query: 19 FIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIAPNIPAM 77
F++RA T D +++ D +T+++ R + +++L S G+ G V+V+ PN
Sbjct: 10 FLDRARTYYGDYEAVVGVDGERFTYAEFGERVDRFSAALQSRGVEKGDRVAVLDPNTHYH 69
Query: 78 YELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSLFPPHSK 137
E F GA+ +N RL +L S + +V+ D+ + + V
Sbjct: 70 LEAAFGAMQCGALHVPLNYRLTTDDYEYLLSDSGATVVYADYQYAGKIEAV------RDD 123
Query: 138 TPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDPMV-LNY 196
P V +T+D P D++D +E L + D + RP+ D ++ +NY
Sbjct: 124 VPAEVFVTND----------PAAVDGDWLD-FEAFLDEADAD-DYERPEMSEDELITINY 171
Query: 197 TWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWGAAVVGA 256
T GTT PKGV + ++ + A I + V LWTLPMFH NGW + GA
Sbjct: 172 TSGTTGDPKGVCRTHRTESLHAQLVTIHHHIADDDVYLWTLPMFHVNGWGHIYAVTGRGA 231
Query: 257 TNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE----AKQLDRPVRILTAGSP 312
+VC R DA VF I + V+ C AP VL++L E A D PVR+ AGS
Sbjct: 232 KHVCTRGVDAEQVFDAITEEDVSFFCCAPTVLSILREYAEEHDPAYAGDNPVRVTAAGSA 291
Query: 313 PPAPVLLRTES-LGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARE---RASLKARQGVR 368
P+ + TES G+ + YG TE + + N+L E R SLK RQGV
Sbjct: 292 APSATIRHTESEFGWEFTQLYGATETGPLIATS----DANRLIPDEGGLRFSLKQRQGVA 347
Query: 369 TIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD---GRYYT 425
+G T++ +VD + G V RD T GE+V+RG +M Y P+ T D G Y+T
Sbjct: 348 PLG-TDLRVVDDD-GEQVPRDDATIGEVVVRGNQVMEKYWNKPDETHDAFNDRLEGWYHT 405
Query: 426 GDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPFWQEI 485
GD+ +++ DG + I+DR KD+IISGGENISS E+E L+ H V + AV+ P W E
Sbjct: 406 GDLAVVNEDGMIAIQDRKKDIIISGGENISSVELEDALFDHDAVGDVAVIPAPSEKWGET 465
Query: 486 PCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQKYVL 544
P AFV G D T +++ Y R R+ Y + F+ E+PKTATGK+QKY L
Sbjct: 466 PKAFVVPANG-DVENPGVTAEELTAYTRDRLAGYKAIREFEFVAEIPKTATGKIQKYEL 523
>gi|448717675|ref|ZP_21702759.1| AMP-dependent synthetase and ligase [Halobiforma nitratireducens
JCM 10879]
gi|445785545|gb|EMA36333.1| AMP-dependent synthetase and ligase [Halobiforma nitratireducens
JCM 10879]
Length = 536
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 186/544 (34%), Positives = 268/544 (49%), Gaps = 38/544 (6%)
Query: 13 PLTPLGFIERAATACDDCPSIIYND-TTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F+E+A + +I+ D +T+++ R + A++L GI G V+V+
Sbjct: 4 PLVVTAFLEQARNHYANQEAIVGADGDRFTYAELGDRVDRFAAALQERGIEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E F GA+F +N RL A IL + ++ D+ + + +
Sbjct: 64 PNTHYHLEAAFGAMNIGAVFTPLNYRLTADDYEYILSDAGVDAIYADYEYAEKIEAI--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
P IT+D E D ++++ L+ P++ +P+ D
Sbjct: 121 ---RDDVPTETFITNDTE-----------SVEDEWESFDTALSDAGPEYD--QPEMSEDE 164
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++ I A I + V LWTLPMFH NGW +
Sbjct: 165 IITINYTSGTTGDPKGVCRTHRTETIHAYLVSIYHELTDDDVYLWTLPMFHVNGWGHIYA 224
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPE-----AKQLDRPVR 305
GA +VC R +A + IR V+ +C AP VLN L E A D VR
Sbjct: 225 VTGQGAKHVCTRGVNADQIVDAIRTEDVSFLCAAPAVLNQLIDYYEDEGGPAMAGDNDVR 284
Query: 306 ILTAGS-PPPAPVLLRTESLGFIVSHGYGKTEIAG-VNVSCAWKPKWNKLPARERASLKA 363
+ TAGS PP A + E + + H YG TE + +S + + R LK
Sbjct: 285 VTTAGSAPPEATIRAVEEEFDWRLKHLYGATETGPLITISAPSR----HVTEENRYELKK 340
Query: 364 RQGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMKD--- 420
RQG+ +G T+V +VD E G V RD +T GE+V+RG +M Y PEAT + D
Sbjct: 341 RQGMGILG-TDVRVVD-EDGEDVPRDDRTLGEVVVRGNQVMDHYWNKPEATEQAFNDRVE 398
Query: 421 GRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDP 480
G Y+TGD+ + +G + I+DR KD+IISGGENISS E+E L+ H V +AAV+ P
Sbjct: 399 GYYHTGDLATIDENGLIAIRDRKKDIIISGGENISSIELEDALFDHDAVADAAVIPAPSE 458
Query: 481 FWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQ 540
W E P AFV +G D + ++ + R R+ Y V + V F+ ELPKTATGK Q
Sbjct: 459 EWGETPKAFVVPSSG-DPDDPPVSADELTDFTRDRLASYKVVRRVEFVGELPKTATGKTQ 517
Query: 541 KYVL 544
KY L
Sbjct: 518 KYEL 521
>gi|378729291|gb|EHY55750.1| fatty-acyl-CoA synthase [Exophiala dermatitidis NIH/UT8656]
Length = 598
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 169/493 (34%), Positives = 257/493 (52%), Gaps = 21/493 (4%)
Query: 67 VSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLL 126
V ++ N PA E F + +GA+ IN RL I+ I H+++ + VD + L
Sbjct: 109 VGILCTNTPAFLEAVFGIGAAGAVNIAINYRLKQDDIAYIFDHADADAIVVD----AEFL 164
Query: 127 EVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPK 186
++ F L++ TD I P + + + A+G +
Sbjct: 165 HLLDDFKAKHPNVPLIVDTDTDAIEGQLCGPFDEAVLEGLQYDISQGARGWEGLE-AQTA 223
Query: 187 SDLDPMVLNYTWGTTSAPKGVVQCYKAFFIIA----VDSLIDWVVPKQSVLLWTLPMFHN 242
+ L YT GTT+ PKGV ++ ++ A V+S + + ++ LWTLPMFH
Sbjct: 224 DEFAVTALAYTSGTTARPKGVEYTHRGGYLAALANVVESGLSYHDGERCKYLWTLPMFHA 283
Query: 243 NGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQLDR 302
GW+F W V T+ CLRK D P ++ L+++ G+TH C AP V LL + A +L +
Sbjct: 284 MGWTFPWAVTAVRGTHYCLRKIDYPEIWRLLKEEGITHYCAAPTVNTLLCADSNAAKLAQ 343
Query: 303 PVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLP-ARERASL 361
PVR+ A SPP A + + +L H YG TE G P+W+ LP +++ +
Sbjct: 344 PVRVTVAASPPTAHLFEQMTNLNLRPVHVYGLTETYGPITKGYILPEWDNLPNVKDKYAK 403
Query: 362 KARQGVRTIGLTEVDIVD---PE-TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKC 417
ARQG + V ++ PE T + V+++G+ GEIV G GY KD AT K
Sbjct: 404 MARQGHGIVTSLPVRVIKTDLPEGTIVDVEKNGKEIGEIVFVGNLCARGYYKDEAATRKL 463
Query: 418 MKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGR 477
G ++GD+ + HPDG ++I DR+KD+IISGGENISS +ES+ +HP + E V
Sbjct: 464 FAGGVLHSGDLAVWHPDGAIQILDRAKDIIISGGENISSVALESIFVTHPDILECGVAAV 523
Query: 478 PDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRAR--IPRYMVPKTVVFIDELPKTA 535
D W E P AF+++K G+ T +D+I++ + I R+MVP+ V + ELPKT+
Sbjct: 524 SDSHWGERPKAFITIKPGSK-----VTGEDVIKWAKDHPGISRFMVPREVEIVPELPKTS 578
Query: 536 TGKVQKYVLGDIA 548
TGK++K +L D A
Sbjct: 579 TGKIRKNILRDWA 591
>gi|258576695|ref|XP_002542529.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902795|gb|EEP77196.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 575
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 190/555 (34%), Positives = 281/555 (50%), Gaps = 29/555 (5%)
Query: 10 NSCPLTPLGFIERAATACDDCPSIIY---NDTTY--TWSQTYRRCLQLASSLSSFGINPG 64
N L+P F+ RAA D +I + N+ ++ +T R LA +
Sbjct: 27 NRHTLSPTFFLPRAAAIEPDAEAIYHVTANNKVLRRSYIETADRARGLAYYIKKHEYKR- 85
Query: 65 HVVSVIAPNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSL 124
V ++ PN PA E +A+ +GA+ +N RL I+ I HSE + VD
Sbjct: 86 --VGILCPNTPAFLESIYAIAAAGAVNVAVNYRLKPEDITYIFTHSEVDFIIVD----EE 139
Query: 125 LLEVVSLFPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVR 184
L ++ F +++ TD S P A + A G
Sbjct: 140 YLHLLDGFREGRPGFPVIVDTDTDATEGELSGP--FDAAILEGLKHDTEAGGHGWNGLET 197
Query: 185 PKSDLDPMV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVV---PKQSVLLWTLPMF 240
D + ++ L YT GTT+ PKGV ++ ++ AV ++I+ + + LWTLPMF
Sbjct: 198 HAEDEESLIALAYTSGTTARPKGVEYIHRGCYLAAVANVIESGLNYHQGRCRYLWTLPMF 257
Query: 241 HNNGWSFTWGAAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLNLLSSSPEAKQL 300
H GW+F W V T+ CLRK D P ++ L+++ +TH AP V +L SS EA++L
Sbjct: 258 HAMGWTFPWAITAVRGTHYCLRKIDYPQIWRLLKEEKITHFNAAPTVNTVLCSSKEAERL 317
Query: 301 DRPVRILTAGSPPPAPVLLRTESLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERAS 360
PVR+ A SPP + + L H YG TE G P+W+ LP +E+
Sbjct: 318 PSPVRVTVAASPPTPHLFEQMMGLNLHPVHVYGMTETYGPITKGYHMPEWDALPVKEKYE 377
Query: 361 LKARQGVRTIGLTEVDIVDPE----TGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSK 416
ARQG + V ++ E T + V+R+G+ GEIV G GY KDPEATSK
Sbjct: 378 RMARQGHGFVTSLPVRVIKTEVPEGTVIDVERNGKEIGEIVFTGNICARGYYKDPEATSK 437
Query: 417 CMKDGRYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVG 476
G ++GD+ + HPDG ++I DR+KD+IISGGENISS +E++L +HP + E VV
Sbjct: 438 LFAGGVLHSGDLAVCHPDGSIKILDRAKDIIISGGENISSVALEAMLATHPDILEVGVVA 497
Query: 477 RPDPFWQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCR--ARIPRYMVPKTVVFIDELPKT 534
D W E P AF++++ G G +D+I++ + + I R+MVP+ V + ELPKT
Sbjct: 498 VADSHWGERPKAFITVQPGRTLRG-----EDVIEWAKHTSGISRFMVPREVEVLSELPKT 552
Query: 535 ATGKVQKYVLGDIAN 549
+TGKV+K VL + A
Sbjct: 553 STGKVKKNVLREWAK 567
>gi|292655059|ref|YP_003534956.1| acyl-CoA synthetase [Haloferax volcanii DS2]
gi|448292640|ref|ZP_21483046.1| acyl-CoA synthetase [Haloferax volcanii DS2]
gi|291370509|gb|ADE02736.1| acyl-CoA synthetase [Haloferax volcanii DS2]
gi|445572396|gb|ELY26936.1| acyl-CoA synthetase [Haloferax volcanii DS2]
Length = 540
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 183/543 (33%), Positives = 280/543 (51%), Gaps = 32/543 (5%)
Query: 13 PLTPLGFIERAATACDDCPSIIYN-DTTYTWSQTYRRCLQLASSLSSFGINPGHVVSVIA 71
PL F++RA D +++ +T+ + R +++L S G+ G V+V+
Sbjct: 4 PLLVTEFLDRARRYYGDEEAVVATTGERFTYDELGERADGFSAALQSRGVEKGDRVAVLD 63
Query: 72 PNIPAMYELHFAVPMSGAIFNTINTRLDARTISIILKHSESKLVFVDHLSSSLLLEVVSL 131
PN E + GA+ +N RL +L ++ V+ D+ + + V
Sbjct: 64 PNTHYHLEAAYGSMQLGAVHMPLNYRLVPADFEYVLNDADVTAVYADYAFAEKIDAV--- 120
Query: 132 FPPHSKTPKLVLITDDKEISSSSSPPPRIPPADFVDTYENMLAKGDPQFSWVRPKSDLDP 191
+ P + +T+D E ++ S+ +++D ++ ++A+ + RP+ D D
Sbjct: 121 ---RDEIPAEIFVTNDPEKAAESTD------GEWLD-FDELVAE---STDYERPEMDEDD 167
Query: 192 MV-LNYTWGTTSAPKGVVQCYKAFFIIAVDSLIDWVVPKQSVLLWTLPMFHNNGWSFTWG 250
++ +NYT GTT PKGV + ++A I A + + V LWTLPMFH NGW +
Sbjct: 168 IITINYTSGTTGDPKGVCRTHRAETIHAYLISMHQDIGDDDVYLWTLPMFHVNGWGHIYA 227
Query: 251 AAVVGATNVCLRKFDAPTVFALIRKHGVTHMCGAPIVLN-LLSSSPEAKQLD----RPVR 305
GA +VC R +A V IR V+++C AP VLN L+ E ++ PVR
Sbjct: 228 ITGHGAKHVCTRGVEAEAVLDAIRDEDVSYLCAAPTVLNILMKHYREEGGVETTGASPVR 287
Query: 306 ILTAGSPPPAPVLLRTE-SLGFIVSHGYGKTEIAGVNVSCAWKPKWNKLPARERASLKAR 364
TAG+ PP + E G+ + H YG TE G ++ + ++ +R +K +
Sbjct: 288 AATAGAAPPEATIRTVEDEFGWRLMHVYGATE-TGPLITTSEAGRY-LTDGDDRFGVKKK 345
Query: 365 QGVRTIGLTEVDIVDPETGLSVKRDGQTRGEIVMRGGSLMLGYLKDPEATSKCMK---DG 421
QG+ +G T+V +VD E G V RD Q+ GEIV+ G +M Y PE T + +G
Sbjct: 346 QGIGYLG-TDVRVVD-EDGTDVPRDEQSVGEIVVTGNQVMEKYWNKPEETEEAFSARLEG 403
Query: 422 RYYTGDVGMMHPDGYLEIKDRSKDVIISGGENISSTEIESVLYSHPMVNEAAVVGRPDPF 481
Y+ GD+ ++ +G++ I+DR KD+IISGGENISS E+E L+ H V + AV+ P
Sbjct: 404 YYHMGDLAVVDENGFISIQDRKKDIIISGGENISSIELEDTLFDHDEVADVAVIPVPSDE 463
Query: 482 WQEIPCAFVSLKTGTDSGGMMTTEKDIIQYCRARIPRYMVPKTVVFIDELPKTATGKVQK 541
W E P AFV +G +T E +I +CR RI Y VPK V F+ ELPKTATGKVQK
Sbjct: 464 WGESPKAFVVPTSGDPDAPGVTAEA-LIAFCRERIATYKVPKEVEFVTELPKTATGKVQK 522
Query: 542 YVL 544
Y L
Sbjct: 523 YEL 525
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,221,262,398
Number of Sequences: 23463169
Number of extensions: 398549455
Number of successful extensions: 1207443
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 36433
Number of HSP's successfully gapped in prelim test: 20680
Number of HSP's that attempted gapping in prelim test: 981094
Number of HSP's gapped (non-prelim): 119075
length of query: 558
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 410
effective length of database: 8,886,646,355
effective search space: 3643525005550
effective search space used: 3643525005550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)